BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780846|ref|YP_003065259.1| bifunctional riboflavin
kinase/FMN adenylyltransferase [Candidatus Liberibacter asiaticus str.
psy62]
         (324 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040523|gb|ACT57319.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 324

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR
Sbjct: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT
Sbjct: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL
Sbjct: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG
Sbjct: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE
Sbjct: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DEKKARKILESSYPLSERDRIICF
Sbjct: 301 DEKKARKILESSYPLSERDRIICF 324


>gi|315122730|ref|YP_004063219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496132|gb|ADR52731.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 324

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/324 (75%), Positives = 281/324 (86%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MHVFHNIE NQ LPNHLKGGVV IGNFDGIHLGH+ ILE AIKIAN +P  VL F+PHPR
Sbjct: 1   MHVFHNIETNQPLPNHLKGGVVVIGNFDGIHLGHYSILEHAIKIANGAPTAVLLFSPHPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++QSS+P+FTL+P SIQ KILEKMGFSALIRYKFTLE +NYS+EQFI+KVLVEWLE K 
Sbjct: 61  IVLQSSTPLFTLTPQSIQTKILEKMGFSALIRYKFTLEMSNYSSEQFIRKVLVEWLEAKK 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VITG++FRFGK+R+GD   L+K G KYGF+T+ IDELR+N  QI+SSS IRT LT G+V 
Sbjct: 121 VITGSQFRFGKNRSGDGTFLEKSGRKYGFNTILIDELRDNTDQIISSSKIRTELTNGNVH 180

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NAAHLLGY FTIES V+HG+KIGRTLGFPTANMQLS +  LKEGVY I FRTQD+ SY+G
Sbjct: 181 NAAHLLGYHFTIESKVVHGKKIGRTLGFPTANMQLSSETSLKEGVYTIHFRTQDKISYNG 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +ANFGRNPT++ NGPLLLESFIFDFSQEIYGQ C VSFFD+LRPEIKFKD+++L+ +  +
Sbjct: 241 IANFGRNPTVIQNGPLLLESFIFDFSQEIYGQTCAVSFFDFLRPEIKFKDLQELQKHTQK 300

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DEKKARK+LE+  PLSERDRIICF
Sbjct: 301 DEKKARKLLENYQPLSERDRIICF 324


>gi|218682200|ref|ZP_03529801.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli CIAT 894]
          Length = 327

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 220/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I  A   P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLSRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDHEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGS 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA++GR PT+  NG  LLE+++FDFS ++YGQRC VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DGVASYGRRPTVTANGAPLLETYLFDFSGDLYGQRCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLSGVTPLGELDRKLCF 326


>gi|209548080|ref|YP_002279997.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533836|gb|ACI53771.1| riboflavin biosynthesis protein RibF [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 327

 Score =  345 bits (884), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 159/326 (48%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I  A   P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G+ YGF    ID  R+  + + SSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQRC VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLSGVQPLGELDRKLCF 326


>gi|218673797|ref|ZP_03523466.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli GR56]
          Length = 327

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HLKGGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IRT L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRTLLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGELDRKLCF 326


>gi|222085007|ref|YP_002543536.1| riboflavin biosynthesis protein RibF [Agrobacterium radiobacter
           K84]
 gi|221722455|gb|ACM25611.1| riboflavin biosynthesis protein RibF [Agrobacterium radiobacter
           K84]
          Length = 327

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/326 (48%), Positives = 221/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP+ LKGGV+AIGNFDG+H GH  +L++A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPDTLKGGVIAIGNFDGVHRGHQSVLDRALEIARERGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +   P+F ++P  ++ ++LE MGF+A+I Y F    +  SA++F+  +L++WL  
Sbjct: 61  PRTVFKPDHPVFRVTPAPLKARLLEAMGFNAVIEYPFDRAFSQRSADEFVHSILIDWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG DR G    L   G K+GF    ID  R+  + +VSSS IRT LT+G 
Sbjct: 121 SEVVTGFDFHFGHDRQGGPAFLMNAGSKHGFGVTLIDAFRDENADVVSSSRIRTLLTEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+T+E++VI GE++GRTLGFPTANM+L P++ LK G+YA+RFR  D    
Sbjct: 181 VAEAAGLLGYRYTVEAEVIGGEQLGRTLGFPTANMRLPPEVELKPGIYAVRFRAADGIIR 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+F+FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTDNGAPLLETFVFDFSGDLYGQICSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
            +DE++AR +L    PL + DR I F
Sbjct: 301 RKDEEEARALLAGVRPLGDIDRAIAF 326


>gi|241203266|ref|YP_002974362.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240857156|gb|ACS54823.1| riboflavin biosynthesis protein RibF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 327

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 159/326 (48%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I  A   P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLSRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GFSA+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFSAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G  YGF    ID  R+  + +VSSS+IR  L +G+
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGHTYGFGVTLIDAFRDENADVVSSSHIRALLKEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL   DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGALDRKLCF 326


>gi|190890538|ref|YP_001977080.1| riboflavin kinase/FMN adenylyltransferase [Rhizobium etli CIAT 652]
 gi|190695817|gb|ACE89902.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CIAT 652]
          Length = 327

 Score =  339 bits (870), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPVHLRGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQAPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSQVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGELDRKLCF 326


>gi|116250660|ref|YP_766498.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255308|emb|CAK06383.1| putative riboflavin biosynthesis protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 327

 Score =  338 bits (868), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I+     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPPHLKGGVIAIGNFDGVHRGHQSVLSRALEISKTRGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GFSA+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFSAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G  YGF    ID  R+  + +VSSS+IR  L +G+
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGHTYGFGVTLIDAFRDENADVVSSSHIRALLKEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL   D+ +CF
Sbjct: 301 KRDEEEARALLAGVKPLGTLDQKLCF 326


>gi|327191134|gb|EGE58179.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CNPAF512]
          Length = 327

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 156/326 (47%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F +E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDVEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSQVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLS  D  +CF
Sbjct: 301 KRDEEEARALLAGVKPLSALDGKLCF 326


>gi|86356477|ref|YP_468369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli CFN 42]
 gi|86280579|gb|ABC89642.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CFN 42]
          Length = 327

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 216/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHRSVLNRALEIARARSIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGY +T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYHYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+F+FDFS ++YGQ C VSFF +LRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETFLFDFSGDLYGQLCAVSFFGFLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 RRDEEEARALLAGVKPLGELDRKLCF 326


>gi|15888028|ref|NP_353709.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium tumefaciens str. C58]
 gi|15155644|gb|AAK86494.1| riboflavin biosynthesis bifunctional protein [Agrobacterium
           tumefaciens str. C58]
          Length = 326

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 221/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VFH  E  + LP  L+GGV+AIGNFDG+H GH  +L++A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKEPLPEALRGGVIAIGNFDGVHRGHRAVLDRALELAEARGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +  +P+F L+P  ++ +ILE +GF ++I Y F  E +  SA++F+Q +LV+WL  
Sbjct: 61  PRSVFRPDTPVFRLTPAPLKARILEAIGFRSVIEYPFDREFSQRSADEFVQSILVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G+++GF    +D  R+  S +VSSS IR+ L +G 
Sbjct: 121 SAVVTGFDFHFGKGREGGPAFLMAAGKRHGFDVTLVDAFRDEGSDVVSSSRIRSLLCEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+VI G+K+GRTLG+PTANM L+P+  LK G+YA+RFR  D + +
Sbjct: 181 VAGAAGLLGYRFTVESEVIGGQKLGRTLGYPTANMALAPETELKAGIYAVRFRRLDGSIH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+F+FDFS ++YG+ C+VSFF +LR E+KF  ++ L   +
Sbjct: 241 DGVASFGYRPTVTENGAALLETFLFDFSGDLYGEVCSVSFFGHLRDELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLS+ D  I F
Sbjct: 301 RRDEEEARAMLSGVRPLSQLDAKIAF 326


>gi|218663009|ref|ZP_03518939.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli IE4771]
          Length = 322

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 155/319 (48%), Positives = 212/319 (66%), Gaps = 2/319 (0%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS 65
           E    LP HLKGGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PHPRT+ + 
Sbjct: 3   ETRNPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPHPRTVFRP 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +P+F L+P  ++ +ILE +GF A+I Y F  E +  SA+ FI  +L +WL    V+TG 
Sbjct: 63  QTPVFRLTPAPLKARILETLGFKAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGF 122

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G V   A +
Sbjct: 123 DFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRMLLKEGDVSEVAGM 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +  VA++G
Sbjct: 183 LGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLHDAVASYG 242

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           R PT+  NG  LLE+F+FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +  DE++A
Sbjct: 243 RRPTVTENGAPLLETFLFDFSGDLYGQFCAVSFFGYIRPELKFDGLDPLVAQIKRDEEEA 302

Query: 306 RKILESSYPLSERDRIICF 324
           R +L    PL E DR +CF
Sbjct: 303 RALLAGVKPLGELDRKLCF 321


>gi|150395636|ref|YP_001326103.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sinorhizobium medicae WSM419]
 gi|150027151|gb|ABR59268.1| riboflavin biosynthesis protein RibF [Sinorhizobium medicae WSM419]
          Length = 327

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/326 (47%), Positives = 215/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VFH  E    LP HL+GGVVAIGNFDG+H GH  +L +A+   +    P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPGHLRGGVVAIGNFDGVHRGHQSVLNRALAEAVKRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE MGF A+I Y F    +  SA  FI ++L EWL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILEGMGFGAVIEYPFDRSFSELSAFDFIHRILREWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   GE+ GF    +D  R+  + ++SSS IR+ L +G 
Sbjct: 121 SHVVTGFDFHFGKGREGGPAFLMAAGEREGFGVTLVDAFRDENAAVISSSFIRSLLAEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V +AA LLGYR+T+E++VI G+K+GRTLG+PTANM+L P+  LK G+YA+RFR  D + +
Sbjct: 181 VSHAAGLLGYRYTVEAEVIGGKKLGRTLGYPTANMRLPPEAELKSGIYAVRFRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  +G  LLE+F+FDFS ++YG+ C VSFF  LR E+KF  +E+L + M
Sbjct: 241 DGVASFGRRPTVDSDGEALLETFVFDFSADLYGEICAVSFFGRLRDELKFDGLEQLMVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR ++    PLS+ DR + F
Sbjct: 301 RSDESEARALIAGVQPLSDIDRRLTF 326


>gi|325292068|ref|YP_004277932.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium sp. H13-3]
 gi|325059921|gb|ADY63612.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium sp. H13-3]
          Length = 326

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VFH  E  + LP  L+GGV+AIGNFDG+H GH  +L++A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKEPLPEGLRGGVIAIGNFDGVHRGHRAVLDRALELAEARGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +  +P+F L+P  ++ +ILE +GF ++I Y F  E +  SAE+F+  +LV+WL  
Sbjct: 61  PRSVFRPETPVFRLTPAPLKARILEAIGFRSVIEYPFDREFSQRSAEEFVNSILVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G++ GF    +D  R+  + +VSSS IR+ L +G 
Sbjct: 121 SAVVTGFDFHFGKGREGGPAFLMAAGKRNGFDVTLVDAFRDEGADVVSSSRIRSLLCEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA  LGYRFT+ES+VI G+K+GRTLG+PTANM LSP+  LK G+YA+RFR  D   Y
Sbjct: 181 VAGAAGQLGYRFTLESEVIGGQKLGRTLGYPTANMALSPETELKAGIYAVRFRRPDGAIY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+++FDFS ++YG+ C+VSFF +LR E+KF  ++ L   +
Sbjct: 241 DGVASFGYRPTVTDNGAALLETYVFDFSGDLYGEVCSVSFFGHLRDELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLSE D  I F
Sbjct: 301 RRDEEEARAMLSGVRPLSELDAKIAF 326


>gi|15964549|ref|NP_384902.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sinorhizobium meliloti 1021]
 gi|307314739|ref|ZP_07594335.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti
           BL225C]
 gi|307320033|ref|ZP_07599454.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti AK83]
 gi|15073727|emb|CAC45368.1| Probable riboflavin biosynthesis protein RibF includes: riboflavin
           kinase and FMN adenylyltransferase [Sinorhizobium
           meliloti 1021]
 gi|306894248|gb|EFN25013.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti AK83]
 gi|306898963|gb|EFN29609.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti
           BL225C]
          Length = 327

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 213/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VFH  E    LP HL+GGVVAIGNFDG+H GH  +L +A++  +    P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPEHLRGGVVAIGNFDGVHRGHQSVLNRALEEAVKRAVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE MGF A+I Y F    +  SA  FI  +L EWL  
Sbjct: 61  PRTVFRPDTPVFRLTPAPLKARILEGMGFGAVIEYPFDRSFSELSASDFIHSILREWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   GE+ GF    +D  R+  + ++SSS IR+ L  G 
Sbjct: 121 SHVVTGFDFHFGKGREGGPAFLMAAGEREGFGVTLVDAFRDENAAVISSSFIRSLLADGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V +AA LLGYR+T+E++VI G+K+GRTLG+PTANM+L P+  LK G+YA+RFR  D + +
Sbjct: 181 VPHAAGLLGYRYTVEAEVIDGKKLGRTLGYPTANMRLPPEAELKSGIYAVRFRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  +G  LLE+F+FDFS ++YG+ C VSFF  LR E+KF  +E L + M
Sbjct: 241 DGVASFGRRPTVDSDGEALLETFVFDFSADLYGEICAVSFFGRLRDELKFDGLEPLMVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
            +DE +AR +L    PLS  DR + F
Sbjct: 301 RKDESEARALLAGVQPLSGIDRRLNF 326


>gi|319784278|ref|YP_004143754.1| riboflavin biosynthesis protein RibF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170166|gb|ADV13704.1| riboflavin biosynthesis protein RibF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 326

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 213/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  F  I     LP  L+GGVVAIGNFDG+H GH  +LE+A   A     P  VL+F PH
Sbjct: 1   MAAFQRILATAPLPADLRGGVVAIGNFDGVHRGHQAVLERASAEAGRRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR I +   P+F L+PP ++ ++L  +GF+AL+   FT + A+ SAE F+  VL   L +
Sbjct: 61  PRKIFRPDIPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFASLSAEAFVTDVLETNLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGKDR G    L   GE++GF    +D  R+  +++VSSS IR  L +G 
Sbjct: 121 THAVTGFDFHFGKDRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRGLLGEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+LS +  L+EG+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLSAEAALREGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LRPE+KF+ ++ L   M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGEVCQVSFFGFLRPEVKFEGLDALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR +L    PLS+ D  + F
Sbjct: 301 KRDEAEARALLAGVRPLSDLDAEMAF 326


>gi|260463260|ref|ZP_05811461.1| riboflavin biosynthesis protein RibF [Mesorhizobium opportunistum
           WSM2075]
 gi|259030850|gb|EEW32125.1| riboflavin biosynthesis protein RibF [Mesorhizobium opportunistum
           WSM2075]
          Length = 326

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 212/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  F ++     LP  L+GGVVAIGNFDG+H GH  +LE+A+   +    P  VL+F PH
Sbjct: 1   MEAFQHLSATMPLPAELRGGVVAIGNFDGVHRGHQAVLERALAEAVRRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRTI +   P+F L+PP ++ ++L  +GF+AL+   FT + A+ SAE F+  VL   L +
Sbjct: 61  PRTIFRPDMPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFASLSAEAFVTDVLERTLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGK R G    L   GE++GF    +D  R+  +++VSSS IR  L  G 
Sbjct: 121 THAVTGFDFHFGKGRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRALLCDGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+L  +  L++G+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLPAEAALRQGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LR EIKF  ++ L + M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGEICQVSFFGFLRSEIKFDGLDALVVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +A+ +L    PLSE D  I F
Sbjct: 301 KRDEAEAKALLAGVEPLSELDSAIAF 326


>gi|222106807|ref|YP_002547598.1| riboflavin biosynthesis protein RibF [Agrobacterium vitis S4]
 gi|221737986|gb|ACM38882.1| riboflavin biosynthesis protein RibF [Agrobacterium vitis S4]
          Length = 326

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 212/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP+ LKGGVVAIGNFDG+H GH  +LE+A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKTPLPDSLKGGVVAIGNFDGVHRGHQSVLERALELARQRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +     P+F L+P  ++ ++LE MGF ++I Y F  E +  SAE F++ VLV+WL  
Sbjct: 61  PRAVFTPQDPVFRLTPAPLKARLLEAMGFQSVIEYPFDREFSQRSAEDFVKTVLVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G +YGF    +D  R+  +++VSS+ IR  L KG 
Sbjct: 121 AQVVTGFDFHFGKGREGGPAFLMGMGAQYGFGVTLLDAFRDENAEVVSSTRIRGLLAKGA 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +   A LLGYRFT+E++VI G+++GRTLGFPTANM LSP+  L+ G+YA+R R  D + +
Sbjct: 181 ISEVAGLLGYRFTVEAEVIKGQQLGRTLGFPTANMALSPETTLRPGIYAVRLRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LR E KF+ ++ L   +
Sbjct: 241 DGVASFGYRPTVTENGAALLETFVFDFSGDLYGEICGVSFFGHLRDEWKFEGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             D ++AR +L    PL E DR I F
Sbjct: 301 NIDAEEARALLAGVKPLGELDRKITF 326


>gi|13476810|ref|NP_108379.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mesorhizobium loti MAFF303099]
 gi|14027571|dbj|BAB53840.1| riboflavin kinase; RibF [Mesorhizobium loti MAFF303099]
          Length = 326

 Score =  324 bits (831), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 211/326 (64%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  F ++     LP  L+GGVVAIGNFDG+H GH  +LE+A+   +  + P  VLSF PH
Sbjct: 1   MVGFQHLSATAPLPADLRGGVVAIGNFDGVHRGHQAVLERALAEAVQRDVPALVLSFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + +   P+F L+PP ++ ++L  +GF+AL+   FT + A  SAE F+  VL   L +
Sbjct: 61  PRKVFRPDIPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFAALSAEAFVTDVLERTLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGKDR G    L   GE++GF    +D  R+  +++VSSS IR  L  G 
Sbjct: 121 THAVTGFDFHFGKDRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRALLCDGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+L  +  LKEG+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLPAEATLKEGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L + M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGETSEVSFFGFLRSEIKFDGLDALVVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR +L    PLS+ D  I F
Sbjct: 301 KRDEAEARALLAGVKPLSQLDAAIAF 326


>gi|110632785|ref|YP_672993.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mesorhizobium sp. BNC1]
 gi|110283769|gb|ABG61828.1| FMN adenylyltransferase [Chelativorans sp. BNC1]
          Length = 330

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 150/326 (46%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  F  +   Q++P HL+G VVAIGNFDG+H GH  +LE+A++IA++   P  VL+F PH
Sbjct: 1   MADFLRLSGYQNVPAHLRGAVVAIGNFDGVHRGHQAVLERALEIAHSQGLPAVVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + +   P+F L+P  ++ ++L+ +GF A++   FT E +  SAE+F+ +VLV  L  
Sbjct: 61  PRAVFRPDIPLFRLTPAPMKARLLQALGFDAVVEQSFTREFSTLSAERFVAEVLVGGLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F +GK R G    L   G+ YGF T  +D   +   ++VSSS IR  L +G+
Sbjct: 121 SHVVTGIDFHYGKGRGGSPQTLAAAGQGYGFGTTLVDAFCDEGGEVVSSSRIRALLAEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+T+E++V  G+K+GRTLGFPTANM L  +  L  G+YA+RFR  + T Y
Sbjct: 181 VAEAAGLLGYRYTVEAEVTGGKKLGRTLGFPTANMSLPEEAALHHGIYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVANFGR PT+  NG  LLE+F+F F  ++YG+ C+VS F +LR E KF  ++ L   M
Sbjct: 241 DGVANFGRRPTVDENGAALLETFVFGFDGDLYGETCSVSLFGFLRGEEKFDGLDALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLSE D  I F
Sbjct: 301 KRDEEEARALLSGVRPLSELDFRIAF 326


>gi|153010353|ref|YP_001371567.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562241|gb|ABS15738.1| riboflavin biosynthesis protein RibF [Ochrobactrum anthropi ATCC
           49188]
          Length = 329

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/323 (47%), Positives = 208/323 (64%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  +    SLP  L+  VVAIGNFDG+H GH  +LE+A++IA  S  P  VL+F PHPR+
Sbjct: 6   FQRLSGTDSLPERLQNCVVAIGNFDGVHRGHQAVLERALEIAEKSDLPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +  +PI  L+  + + +IL  MGF A++   FT E ++ SAE F++ +LVE L+   V
Sbjct: 66  FFKPDAPIDRLTAAAKKAEILRLMGFDAVVEQPFTGEFSSRSAEDFVEHILVERLQASCV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    LQK GEK GF    +D   +    +VSS+ IR  L +G V+ 
Sbjct: 126 VTGYDFHFGKGRRGTPEFLQKAGEKAGFTVTLVDAFSDEGDNLVSSTRIRNLLCEGDVVQ 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+     VIHG+K+GRTLGFPTANMQ+     LK G+YA+RFR ++   Y GV
Sbjct: 186 AAGLLGYRYMACGKVIHGKKLGRTLGFPTANMQIDAQAGLKHGIYAVRFRRENGDLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+  +G  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L   M  D
Sbjct: 246 ASFGRRPTVDSDGTPLLETFLFDFSGDLYGEIACVSFFGFLRGEIKFDGLDPLIDQMKRD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           + +AR +L S+ PLSE DR++ F
Sbjct: 306 DAEARALLASAKPLSELDRLLSF 328


>gi|239833542|ref|ZP_04681870.1| riboflavin biosynthesis protein RibF [Ochrobactrum intermedium LMG
           3301]
 gi|239821605|gb|EEQ93174.1| riboflavin biosynthesis protein RibF [Ochrobactrum intermedium LMG
           3301]
          Length = 344

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 204/323 (63%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  +    SLP HL   VVAIGNFDG+H GH  +LE+A++IA     P  VL+F PHPR+
Sbjct: 21  FQRLSGTDSLPGHLHNCVVAIGNFDGVHRGHQAVLERALEIAEKRGLPAVVLTFEPHPRS 80

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +  +PI  L+    + +IL  MGF A++   FT+E ++ SAE F++ +LVE L    V
Sbjct: 81  FFKPDAPIDRLTAAPRKAEILRLMGFDAVVEQPFTVEFSSRSAEDFVEHILVERLHASCV 140

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    LQK GE  GF    +D   +    +VSS+ IR  L +G V  
Sbjct: 141 VTGYDFHFGKGRRGTPEFLQKAGETAGFTVTLVDAFTDEGDNLVSSTRIRNLLCEGDVAQ 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ +  +VIHG+K+GRTLGFPTANMQ+     LK G+YA+RFR  +   + GV
Sbjct: 201 AAGLLGYRYMVCGEVIHGKKLGRTLGFPTANMQIDAQAGLKHGIYAVRFRRANGDLHDGV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+  +G  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L   M  D
Sbjct: 261 ASFGRRPTVDSDGSPLLETFLFDFSDDLYGETACVSFFGFLRGEIKFDGLDPLIDQMKRD 320

Query: 302 EKKARKILESSYPLSERDRIICF 324
           + +AR +L  + PLSE DR++ F
Sbjct: 321 DAEARALLAGAKPLSELDRLLSF 343


>gi|306845517|ref|ZP_07478086.1| riboflavin biosynthesis protein RibF [Brucella sp. BO1]
 gi|306273838|gb|EFM55665.1| riboflavin biosynthesis protein RibF [Brucella sp. BO1]
          Length = 329

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 203/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF  + +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVMLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|254719935|ref|ZP_05181746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           sp. 83/13]
 gi|265984943|ref|ZP_06097678.1| riboflavin biosynthesis protein RibF [Brucella sp. 83/13]
 gi|306838524|ref|ZP_07471362.1| riboflavin biosynthesis protein RibF [Brucella sp. NF 2653]
 gi|264663535|gb|EEZ33796.1| riboflavin biosynthesis protein RibF [Brucella sp. 83/13]
 gi|306406391|gb|EFM62632.1| riboflavin biosynthesis protein RibF [Brucella sp. NF 2653]
          Length = 329

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 203/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A+  + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELADRESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLINQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|225686055|ref|YP_002734027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis ATCC 23457]
 gi|256262824|ref|ZP_05465356.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 2 str.
           63/9]
 gi|260564342|ref|ZP_05834827.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 1 str.
           16M]
 gi|225642160|gb|ACO02073.1| riboflavin biosynthesis protein RibF [Brucella melitensis ATCC
           23457]
 gi|260151985|gb|EEW87078.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 1 str.
           16M]
 gi|263092645|gb|EEZ16866.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410379|gb|ADZ67443.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis M28]
 gi|326553672|gb|ADZ88311.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis M5-90]
          Length = 329

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDSLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|17989389|ref|NP_542022.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 1 str. 16M]
 gi|161620278|ref|YP_001594164.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           canis ATCC 23365]
 gi|163844388|ref|YP_001622043.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis ATCC 23445]
 gi|225628662|ref|ZP_03786696.1| riboflavin biosynthesis protein RibF [Brucella ceti str. Cudo]
 gi|237816707|ref|ZP_04595699.1| riboflavin biosynthesis protein RibF [Brucella abortus str. 2308 A]
 gi|254691369|ref|ZP_05154623.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 6 str. 870]
 gi|254695331|ref|ZP_05157159.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698427|ref|ZP_05160255.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254699491|ref|ZP_05161319.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis bv. 5 str. 513]
 gi|254702615|ref|ZP_05164443.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis bv. 3 str. 686]
 gi|254706254|ref|ZP_05168082.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis M163/99/10]
 gi|254711452|ref|ZP_05173263.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis B2/94]
 gi|254731874|ref|ZP_05190452.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 4 str. 292]
 gi|256029917|ref|ZP_05443531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis M292/94/1]
 gi|256158086|ref|ZP_05456004.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M490/95/1]
 gi|256252959|ref|ZP_05458495.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti B1/94]
 gi|256256554|ref|ZP_05462090.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 9 str. C68]
 gi|260166981|ref|ZP_05753792.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           sp. F5/99]
 gi|260544381|ref|ZP_05820202.1| riboflavin kinase/FAD synthetase [Brucella abortus NCTC 8038]
 gi|260568477|ref|ZP_05838946.1| riboflavin kinase/FAD synthetase [Brucella suis bv. 4 str. 40]
 gi|260756981|ref|ZP_05869329.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 6 str.
           870]
 gi|260759645|ref|ZP_05871993.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 4 str.
           292]
 gi|260762888|ref|ZP_05875220.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882792|ref|ZP_05894406.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 9 str.
           C68]
 gi|261215702|ref|ZP_05929983.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220052|ref|ZP_05934333.1| riboflavin biosynthesis protein RibF [Brucella ceti B1/94]
 gi|261313697|ref|ZP_05952894.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M163/99/10]
 gi|261319061|ref|ZP_05958258.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis B2/94]
 gi|261749946|ref|ZP_05993655.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 5 str. 513]
 gi|261753199|ref|ZP_05996908.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 3 str. 686]
 gi|261756368|ref|ZP_06000077.1| riboflavin kinase/FAD synthetase [Brucella sp. F5/99]
 gi|265986935|ref|ZP_06099492.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M292/94/1]
 gi|265996601|ref|ZP_06109158.1| riboflavin biosynthesis protein RibF [Brucella ceti M490/95/1]
 gi|297249910|ref|ZP_06933611.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 5 str.
           B3196]
 gi|17985263|gb|AAL54286.1| riboflavin kinase / fmn adenylyltransferase [Brucella melitensis
           bv. 1 str. 16M]
 gi|161337089|gb|ABX63393.1| riboflavin biosynthesis protein RibF [Brucella canis ATCC 23365]
 gi|163675111|gb|ABY39221.1| riboflavin biosynthesis protein RibF [Brucella suis ATCC 23445]
 gi|225616508|gb|EEH13556.1| riboflavin biosynthesis protein RibF [Brucella ceti str. Cudo]
 gi|237787520|gb|EEP61736.1| riboflavin biosynthesis protein RibF [Brucella abortus str. 2308 A]
 gi|260097652|gb|EEW81526.1| riboflavin kinase/FAD synthetase [Brucella abortus NCTC 8038]
 gi|260155142|gb|EEW90223.1| riboflavin kinase/FAD synthetase [Brucella suis bv. 4 str. 40]
 gi|260669963|gb|EEX56903.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 4 str.
           292]
 gi|260673309|gb|EEX60130.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677089|gb|EEX63910.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 6 str.
           870]
 gi|260872320|gb|EEX79389.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 9 str.
           C68]
 gi|260917309|gb|EEX84170.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918636|gb|EEX85289.1| riboflavin biosynthesis protein RibF [Brucella ceti B1/94]
 gi|261298284|gb|EEY01781.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis B2/94]
 gi|261302723|gb|EEY06220.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M163/99/10]
 gi|261736352|gb|EEY24348.1| riboflavin kinase/FAD synthetase [Brucella sp. F5/99]
 gi|261739699|gb|EEY27625.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 5 str. 513]
 gi|261742952|gb|EEY30878.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 3 str. 686]
 gi|262550898|gb|EEZ07059.1| riboflavin biosynthesis protein RibF [Brucella ceti M490/95/1]
 gi|264659132|gb|EEZ29393.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M292/94/1]
 gi|297173779|gb|EFH33143.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 5 str.
           B3196]
          Length = 329

 Score =  296 bits (758), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|254712055|ref|ZP_05173866.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M644/93/1]
 gi|254715124|ref|ZP_05176935.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M13/05/1]
 gi|261216833|ref|ZP_05931114.1| riboflavin biosynthesis protein RibF [Brucella ceti M13/05/1]
 gi|261319700|ref|ZP_05958897.1| riboflavin biosynthesis protein RibF [Brucella ceti M644/93/1]
 gi|260921922|gb|EEX88490.1| riboflavin biosynthesis protein RibF [Brucella ceti M13/05/1]
 gi|261292390|gb|EEX95886.1| riboflavin biosynthesis protein RibF [Brucella ceti M644/93/1]
          Length = 329

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDTFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|256059566|ref|ZP_05449765.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           neotomae 5K33]
 gi|261323534|ref|ZP_05962731.1| riboflavin biosynthesis protein RibF [Brucella neotomae 5K33]
 gi|261299514|gb|EEY03011.1| riboflavin biosynthesis protein RibF [Brucella neotomae 5K33]
          Length = 329

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 146/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  ++E+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVMERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|148558674|ref|YP_001257248.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ovis ATCC 25840]
 gi|148369959|gb|ABQ62831.1| riboflavin biosynthesis protein RibF [Brucella ovis ATCC 25840]
          Length = 329

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQKSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|163758406|ref|ZP_02165494.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hoeflea
           phototrophica DFL-43]
 gi|162284695|gb|EDQ34978.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hoeflea
           phototrophica DFL-43]
          Length = 329

 Score =  295 bits (756), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 141/324 (43%), Positives = 209/324 (64%), Gaps = 6/324 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           FH++         LK GVVAIGNFDG+H GH  +L +A + A +  +P +VL+F PHPRT
Sbjct: 5   FHDV---SGFAGELKHGVVAIGNFDGMHRGHQAVLARATETAASLGAPASVLTFEPHPRT 61

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           + +   P+F L+P  ++ +IL ++GF A+I + F+   ++ SA++F+  +L   L V+ V
Sbjct: 62  VFRPDEPVFRLTPAPMKARILGQLGFDAVIEHPFSKAFSSQSAQEFVTNILCGHLGVRHV 121

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G+   L + GE++GF    +D   +    +VSSS +R AL  G V  
Sbjct: 122 VTGFDFHFGKGREGNPDYLMQAGEQHGFGVTLVDAFSDENGDVVSSSRVREALAAGDVAL 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ + ++++HG+K+GRTLG+PTANM L P+  L+ G+YA+RFR  +   Y GV
Sbjct: 182 AAGLLGYRYAVSAEILHGKKLGRTLGYPTANMALPPETALRPGIYAVRFRRANGAVYDGV 241

Query: 242 ANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           A+FGR PT+  +G  LLLE+++FDF+ ++YG+ CTVS   YLR E KF  ++ L   M  
Sbjct: 242 ASFGRRPTVDKDGADLLLETYLFDFAGDLYGETCTVSLVSYLRGEEKFDGLDPLVAQMKT 301

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DE +AR +LE+  PLS  D  + F
Sbjct: 302 DEAEARAVLETIAPLSPLDAALNF 325


>gi|256111898|ref|ZP_05452854.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 3 str. Ether]
 gi|265993346|ref|ZP_06105903.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 3
           str. Ether]
 gi|262764216|gb|EEZ10248.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 3
           str. Ether]
          Length = 329

 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++  V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSESEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDSLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|256014986|ref|YP_003104995.1| hypothetical protein BMI_II197 [Brucella microti CCM 4915]
 gi|255997646|gb|ACU49333.1| hypothetical protein BMI_II197 [Brucella microti CCM 4915]
          Length = 315

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 199/314 (63%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +P  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+  +   P+ 
Sbjct: 1   MPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVD 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V+TG  F FG
Sbjct: 61  RLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  AA LLGYR+
Sbjct: 121 KGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRY 180

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+
Sbjct: 181 RICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTV 240

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +DE +AR +L 
Sbjct: 241 DDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLA 300

Query: 311 SSYPLSERDRIICF 324
              P+S  DR++ F
Sbjct: 301 DVRPISGLDRMLSF 314


>gi|23499962|ref|NP_699402.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis 1330]
 gi|62317148|ref|YP_223001.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269131|ref|YP_418422.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis biovar Abortus 2308]
 gi|189022407|ref|YP_001932148.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus S19]
 gi|23463542|gb|AAN33407.1| riboflavin biosynthesis protein RibF [Brucella suis 1330]
 gi|62197341|gb|AAX75640.1| RibF, riboflavin biosynthesis protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939405|emb|CAJ12359.1| Riboflavin kinase / FAD synthetase:Cytidyltransferase-related
           domain [Brucella melitensis biovar Abortus 2308]
 gi|189020981|gb|ACD73702.1| Riboflavin kinase / FAD synthetase [Brucella abortus S19]
          Length = 315

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 199/314 (63%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +P  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F PHPR+  +   P+ 
Sbjct: 1   MPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVD 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V+TG  F FG
Sbjct: 61  RLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  AA LLGYR+
Sbjct: 121 KGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRY 180

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+
Sbjct: 181 RICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTV 240

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +DE +AR +L 
Sbjct: 241 DDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLA 300

Query: 311 SSYPLSERDRIICF 324
              P+S  DR++ F
Sbjct: 301 DVRPISGLDRMLSF 314


>gi|306840971|ref|ZP_07473712.1| riboflavin biosynthesis protein RibF [Brucella sp. BO2]
 gi|306289028|gb|EFM60293.1| riboflavin biosynthesis protein RibF [Brucella sp. BO2]
          Length = 329

 Score =  292 bits (748), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 145/323 (44%), Positives = 200/323 (61%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A        VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRLAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +L+E L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILIEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIEQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|294853216|ref|ZP_06793888.1| riboflavin biosynthesis protein RibF [Brucella sp. NVSL 07-0026]
 gi|294818871|gb|EFG35871.1| riboflavin biosynthesis protein RibF [Brucella sp. NVSL 07-0026]
          Length = 329

 Score =  292 bits (747), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 146/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A   + P  VL+F  HPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFELHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|240850953|ref|YP_002972353.1| riboflavin biosynthesis protein RibF [Bartonella grahamii as4aup]
 gi|240268076|gb|ACS51664.1| riboflavin biosynthesis protein RibF [Bartonella grahamii as4aup]
          Length = 322

 Score =  291 bits (746), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 213/317 (67%), Gaps = 5/317 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
            P+  +G V+A+GNFDG+H GH ++L++A+  A     P+ VL+F PHPR+  Q S+P++
Sbjct: 2   FPSAWRGAVLALGNFDGVHCGHQVVLQKALDFARIKKKPVVVLTFEPHPRSFFQRSAPVY 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +I + +GF+ +I   F  + A  SA++FI+ +L E  +V  V+TG  F+FG
Sbjct: 62  RLTEAAEKAEIFKVLGFNGVIEQPFDAQFATLSADEFIKSILKEVFDVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTV---FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             ++G+  +L +RGEKYGF  V    +  L++++  I+SSS IR  L++G+V  AAHLLG
Sbjct: 122 HQKSGNVQLLCQRGEKYGFEVVQVPCVSRLQDSQQLIISSSFIRQLLSQGNVEKAAHLLG 181

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           Y + + S++I G+K+GR LGFPTAN  L   + L  GVYA+R R  +   Y GVA+FG  
Sbjct: 182 YHYRVCSNIIQGDKLGRLLGFPTANQMLPSQVRLAHGVYAVRLRRANGVLYDGVASFGCR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+V +G  LLE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M  DEKKA++
Sbjct: 242 PTVVKDGAPLLETYLFDFNDDLYGESCTVSFFQFLRGQEKFDGLEPLIAQMRRDEKKAKE 301

Query: 308 ILESSYPLSERDRIICF 324
           IL+ + PLS+ DR++ F
Sbjct: 302 ILKIAQPLSKLDRLLTF 318


>gi|163868770|ref|YP_001609994.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           tribocorum CIP 105476]
 gi|161018441|emb|CAK01999.1| riboflavin biosynthesis protein RibF [Bartonella tribocorum CIP
           105476]
          Length = 327

 Score =  281 bits (720), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 210/322 (65%), Gaps = 10/322 (3%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
            P+  +G V+A+GNFDG+H GH ++L++A+  A   N P  VL+F PHPR+  Q S+P++
Sbjct: 2   FPSAWRGVVLALGNFDGVHRGHQVVLQKALDFARIKNKPAVVLTFEPHPRSFFQHSAPVY 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +I + +GF  +I   F  + A  SA++FI+ +L E  +V  V+TG  F+FG
Sbjct: 62  RLTEAVEKAEIFKILGFDGVIEQPFDAQFAALSADEFIKSILKEAFDVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDEL------RNNKSQ--IVSSSNIRTALTKGHVLNA 182
             ++G+  +L +RG++ GF  V +  +      R+  SQ  I+SSS IR  L++G V  A
Sbjct: 122 HQKSGNVHLLCQRGKEDGFQVVQVSCVSDPSVSRHQDSQPLIISSSFIRQLLSQGEVDKA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           AHLLGY + + S++I G+K+GR LGFPTAN  L P + L  G+YA+R R  D   Y GVA
Sbjct: 182 AHLLGYHYRVCSNIIQGDKLGRLLGFPTANQMLPPQVRLAHGIYAVRLRRADGVLYDGVA 241

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG  PT+V +G  LLE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M  DE
Sbjct: 242 SFGCRPTVVKDGAPLLETYLFDFNDDLYGESCTVSFFQFLRGQEKFDGLEPLIAQMHRDE 301

Query: 303 KKARKILESSYPLSERDRIICF 324
           KKA++IL++  PLS+ DR++ F
Sbjct: 302 KKAKEILKTVQPLSQLDRLLTF 323


>gi|121602494|ref|YP_989423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           bacilliformis KC583]
 gi|120614671|gb|ABM45272.1| riboflavin biosynthesis protein RibF [Bartonella bacilliformis
           KC583]
          Length = 330

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 207/326 (63%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M  F  ++    LP+ L+G V+AIGNFDG+H GH  +L++A++IA   N P  VL+F PH
Sbjct: 1   MTDFLRLQSYSMLPSVLRGAVLAIGNFDGVHRGHQQVLQKALEIARAQNKPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q+S+P++ L+  + + +I + +GF+ +I   F  + A+ SA+ F+  +L + L+V
Sbjct: 61  PRVFFQNSTPVYRLTEAAEKAEIFKVLGFNGVIEQPFDAQFASLSADDFVTTILKQDLDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F+FG  ++G+   L ++G++ GF  V +  +R+   Q +SSS IR  L +  
Sbjct: 121 SVVVTGDNFQFGCHKSGNVSFLSQKGKEEGFAVVQVSSVRSASGQTISSSLIRQLLAQKQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLGY + + SD+IHGEK+GR LGFPTAN  L     L  GVYA+R R      Y
Sbjct: 181 IEQAACLLGYHYRVRSDIIHGEKLGRLLGFPTANQALPYQTTLAHGVYAVRLRRAHGVLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+V NG +LLE+++F+ ++E YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGVASFGCRPTIVENGEVLLETYVFNLAEEFYGESCTVSFLRFLRGQEKFDGVEPLIAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++A++++ +  PLS  D+ + F
Sbjct: 301 QRDEREAKEVITNVQPLSPLDQCLTF 326


>gi|319403938|emb|CBI77526.1| riboflavin biosynthesis protein RibF [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 330

 Score =  275 bits (702), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 203/326 (62%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  F  ++    LP   +G V+AIGNFDG+HLGH ++L++A+ ++     P  VL+F PH
Sbjct: 1   MFDFLRLQECNLLPLAWRGAVLAIGNFDGVHLGHQVVLQKALDLSREKKRPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  S+++FI  +L +  +V
Sbjct: 61  PKSFFQGSTSVDRLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSSDEFITVILKKTFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L +RGE+YGF  V I  L   + Q +SSS IR  L KG 
Sbjct: 121 SAVVTGENFRFGCQKSGNIRFLCQRGEEYGFEVVQIPCLCTAEQQTISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S+VI GEK+GR LGFPTAN  L P   L  GVYA+RFR  + T Y
Sbjct: 181 VSQAAHLLGYHYRVRSNVIQGEKLGRRLGFPTANQLLLPQTGLAHGVYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+FG  PT+V NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGIASFGCRPTVVSNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYGLEALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L +  PLS  D  + F
Sbjct: 301 QHDEKEAQAVLRTKQPLSLLDEALTF 326


>gi|90419971|ref|ZP_01227880.1| riboflavin/FAD biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336012|gb|EAS49760.1| riboflavin/FAD biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 327

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 3/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P  L+G VVA+GNFDG+H GH  +L +A  I  A   P+  L+F PHPR++ +   P+ 
Sbjct: 15  VPADLRGAVVAVGNFDGVHRGHQTVLGEARTIAAAAGRPLVCLTFEPHPRSVFRPDQPVA 74

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P  ++ ++LE +GF A++   FT E A  + + F++ VLVE +    V+ G  F +G
Sbjct: 75  RLTPAPMKARLLEMLGFDAVVEQGFTREFAGLAPKAFVETVLVEAMGAHHVVAGFDFHYG 134

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G    L + G  +GF    +    +   + VSSS IR  L +G V  AA LLGYR+
Sbjct: 135 AKRGGTPETLAEAGRMHGFGATLVPAFVDEGGETVSSSRIRDCLGEGAVTEAAGLLGYRW 194

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           TI  +V+ G K+GRTLG+PTANM + PD LLK G+YA+R R  D T + GVA+FGR PT 
Sbjct: 195 TIAGEVVGGAKLGRTLGYPTANMVIEPDSLLKHGIYAVRLRRADSTLHDGVASFGRRPTF 254

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             NG  L E+F+FDFS ++YG+  +VS F +LR E +F   E L   M  D  +AR +L 
Sbjct: 255 -DNGAALFETFLFDFSGDLYGETVSVSLFGFLRGEERFDGAEALIAQMDGDADEARAMLA 313

Query: 311 SSYPLSERDRIICF 324
              PL + DR + F
Sbjct: 314 GVAPLGDLDRRMAF 327


>gi|319406954|emb|CBI80591.1| riboflavin biosynthesis protein RibF [Bartonella sp. 1-1C]
          Length = 330

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 204/326 (62%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M  F  ++    +P   +G V+AIGNFDG+HLGH ++L++A+ ++     P  VL+F PH
Sbjct: 1   MFDFLRLQECNLIPLAWRGAVLAIGNFDGVHLGHQVVLQKALDLSCEKKRPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  S+++FI  +L +  +V
Sbjct: 61  PKSFFQGSTSVDRLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSSDEFITVILKKTFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L +RGE+YGF  V I  L  ++ Q +SSS IR  L KG 
Sbjct: 121 SAVVTGENFRFGCQKSGNVRFLCQRGEEYGFEVVQIPCLYTSEKQTISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S+VI GEK+GR LGFPTAN  L     L  GVYA+RFR  + T Y
Sbjct: 181 VSQAAHLLGYHYRVRSNVIQGEKLGRRLGFPTANQLLPSQTGLAHGVYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+FGR PT++ NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGIASFGRRPTVISNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYGLEALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L +  PLS  D  + F
Sbjct: 301 QHDEKEAQAVLRTKQPLSLLDEALTF 326


>gi|319898614|ref|YP_004158707.1| riboflavin biosynthesis protein RibF [Bartonella clarridgeiae 73]
 gi|319402578|emb|CBI76123.1| riboflavin biosynthesis protein RibF [Bartonella clarridgeiae 73]
          Length = 330

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 202/314 (64%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           LP   +GGV+AIGNFDG+HLGH  +L++A+ ++     P  VL+F PHP++  Q S+ + 
Sbjct: 13  LPLAWRGGVLAIGNFDGVHLGHQAVLQKALDLSREKKRPALVLTFEPHPKSFFQGSASVD 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +I + +GF  +I   F  + +  SA++FI  +L +  +V  V+TG  FRFG
Sbjct: 73  RLTQAAEKAEIFKILGFHGVIEQPFDEQFSALSADEFITVILKQAFDVSVVVTGDNFRFG 132

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             ++G+   L+++G++YGF  V I  L   + + +SSS IR  L KG V   AHLLGY +
Sbjct: 133 CQKSGNLNFLRQKGKEYGFEVVQIPCLCTRQKETISSSFIRKLLLKGQVSQVAHLLGYHY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            + S+V+ GEK+GR LGFPTAN  L P   L  GVYA+RFR  +   + G+A+FGR PT+
Sbjct: 193 RVSSNVVQGEKLGRHLGFPTANQFLPPQTSLAHGVYAVRFRRANGALHDGIASFGRRPTV 252

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           V NG  +LE+++F+F  ++YG+ CTVSF  +LR + KF  +E L   M  DEK+A+ +L+
Sbjct: 253 VVNGAPVLETYLFNFDDDLYGENCTVSFLQFLRGQKKFDGLEPLITQMQHDEKEAQMVLK 312

Query: 311 SSYPLSERDRIICF 324
           +  PLS  DR++ F
Sbjct: 313 TKQPLSLLDRVLTF 326


>gi|328545059|ref|YP_004305168.1| riboflavin kinase/FMN adenylyltransferase protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414801|gb|ADZ71864.1| Riboflavin kinase/FMN adenylyltransferase protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 333

 Score =  272 bits (696), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 195/318 (61%), Gaps = 4/318 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  ++   + P HL+GGVVAIGNFDG+H GH  +L++A  +A  +  P+  ++F PHPRT
Sbjct: 9   FSLVDDLAAFPAHLRGGVVAIGNFDGVHRGHRAVLDEAAAVARATGEPVYAMTFEPHPRT 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   S P+F L+P  I+  ++E  G   L+   FT + A   A  F++ +L++ L ++  
Sbjct: 69  VFNPSRPVFRLTPAPIKAAVMEAFGLDGLLVVPFTHDFAGMEAADFVRGILIDTLRIRHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK RAG    L+  G  +GF    ++   +   +++SSS IR AL  G ++ 
Sbjct: 129 VTGYDFHFGKARAGTPDYLRNAGRDHGFGVNIVEAENDEGGEVISSSRIRAALADGDLVL 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+ +E  V HGEK GR LG+PTAN++L+P+  L+ G+YA++ +   Q  + GV
Sbjct: 189 ANALLGYRWFVEGTVEHGEKRGRDLGYPTANLRLAPECTLRHGIYAVQVQVDGQ-RHEGV 247

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR P M  NG  LLE+F+FDF+ ++YG+   VSF  +LRPE +F  IE L   M  D
Sbjct: 248 ASFGRRP-MFDNGAPLLETFLFDFAGDLYGRTMRVSFVSFLRPEARFDGIEALIAQMDRD 306

Query: 302 EKKARKILESSYPLSERD 319
             +AR  L S+ PLS  D
Sbjct: 307 SDEARAALASARPLSALD 324


>gi|319405379|emb|CBI78998.1| Riboflavin biosynthesis protein ribf [Bartonella sp. AR 15-3]
          Length = 330

 Score =  271 bits (692), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 198/314 (63%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           LP   +G V+AIGNFDG+HLGH  +L++A+ ++     P  VL+F PHP++  Q S+ + 
Sbjct: 13  LPLAWRGAVLAIGNFDGVHLGHQAVLQKALDLSRERKRPSLVLTFEPHPKSFFQGSTSVD 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +I + +GF  +I   F  + +  SA++FI  +L E L+V  V+TG  FRFG
Sbjct: 73  RLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSADEFITVILKETLDVSVVVTGENFRFG 132

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             ++G+   L +RGE+YGF  V I  L N + Q +SSS IR  L KG V   AHLLGY +
Sbjct: 133 CQKSGNVSFLCQRGEEYGFEVVQIPCLCNAQRQTISSSFIRKLLLKGQVSQVAHLLGYHY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I S+VI GEK+GR LGFPTAN  +     L  GVYA++FR  +   Y G+++FG  PT+
Sbjct: 193 RISSNVIQGEKLGRRLGFPTANQFVPIQTSLAHGVYAVKFRRANGVLYDGISSFGCRPTV 252

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           V NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF ++E L   M  DEK+A+ +L 
Sbjct: 253 VSNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYELESLVAQMQHDEKEAQAVLR 312

Query: 311 SSYPLSERDRIICF 324
           +  PLS  D  + F
Sbjct: 313 TKQPLSLLDEALTF 326


>gi|319409210|emb|CBI82854.1| riboflavin biosynthesis protein RibF [Bartonella schoenbuchensis
           R1]
          Length = 330

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 202/326 (61%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M  F  ++ +  +P  L+G V+AIGNFDG+H GH  +L++A+ +A   N P  VL+F PH
Sbjct: 1   MDNFLRLQGHTEIPEILRGAVLAIGNFDGVHRGHQAVLQKALDLARVKNKPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q S  I  L+P + + +I + +GF  ++   F  + A  SA++FI  VL +  +V
Sbjct: 61  PRSFFQGSDCIDRLTPATEKAEIFKILGFHGVVEEPFDAQFAALSADEFISVVLKQAFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R+G+   L+++GE+ GF  V I  L   + + +SSS IR  L++G 
Sbjct: 121 CVVVTGDNFHFGRKRSGNAQFLRQKGEECGFEVVQIPSLCTLQGEKISSSFIRQLLSQGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S VIHG+K+GR+LGFPT N  L     L  GVYA+R R      +
Sbjct: 181 VEKAAHLLGYHYRVRSKVIHGKKLGRSLGFPTTNQVLPSQTSLAHGVYAVRLRRLSGVLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+V  G  LLE+++FDF+ ++Y + CTVSF  +LR + KF  +E LK  M
Sbjct: 241 DGVASFGCRPTIVDGGAPLLETYLFDFTDDLYDENCTVSFLQFLRGQKKFDGLELLKKQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE + + IL++  PLS  D+++ F
Sbjct: 301 QHDENETKAILKTIQPLSSLDQLLTF 326


>gi|256043120|ref|ZP_05446062.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 296

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 133/294 (45%), Positives = 185/294 (62%), Gaps = 2/294 (0%)

Query: 33  GHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL 90
           GH  +LE+A+++A   + P  VL+F PHPR+  +   P+  L+  + + +IL  MGF A+
Sbjct: 2   GHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAEKAEILRLMGFDAV 61

Query: 91  IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFH 150
           +   FT E +  SAE F+Q +LVE L    V+TG  F FGK R G    L + G+K GF 
Sbjct: 62  MEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTPEFLCEAGKKAGFS 121

Query: 151 TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPT 210
              +D   +    +VSS+ IR  L++G V  AA LLGYR+ I  +VIHG+K+GRTLGFPT
Sbjct: 122 VTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVIHGKKLGRTLGFPT 181

Query: 211 ANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIY 270
           ANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+   G  LLE+F+FDFS ++Y
Sbjct: 182 ANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPLLETFLFDFSGDLY 241

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           G+   VSFF +LR E+KF  ++ L   M +DE +AR +L    P+S  DR++ F
Sbjct: 242 GKTAAVSFFGFLRGEVKFDGLDSLIDQMKQDEAQARALLADVRPISGLDRMLSF 295


>gi|114705801|ref|ZP_01438704.1| hypothetical protein FP2506_15084 [Fulvimarina pelagi HTCC2506]
 gi|114538647|gb|EAU41768.1| hypothetical protein FP2506_15084 [Fulvimarina pelagi HTCC2506]
          Length = 330

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 190/316 (60%), Gaps = 4/316 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSP 68
           +  P  ++GGVVAIGNFDG+H GH  +LE+A++I  A N P+  L+F PHPRT+ +   P
Sbjct: 17  EDCPADIRGGVVAIGNFDGVHRGHRAVLEKAVEIGAAENKPLLCLTFEPHPRTVFKPDRP 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  ++P  ++ +IL  +GF A+I   FT + A  + E+F   VLVE L    V+ G  F 
Sbjct: 77  VARITPAPMKARILGLLGFDAVIEQPFTRDFAGIAPEKFEDDVLVEALGASHVVAGFDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G  R+G    L + G + GF    +    +   + VSSS IR AL +G V  AA LLGY
Sbjct: 137 YGAKRSGTPESLGRAGLRLGFGATLVPAFEDEGGETVSSSRIRAALREGRVEEAAGLLGY 196

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           RFTI  +++HG+K+GRTLGFPTAN+ L  D LL  G+YA+R R  D + + GVA++GR P
Sbjct: 197 RFTIRGEIVHGKKLGRTLGFPTANLVLQ-DELLAHGIYAVRLRRADGSLHDGVASYGRRP 255

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +G  L E+FIFDF+ ++YG+   V+    LR E KF     L   M  D ++AR +
Sbjct: 256 TF-DDGAALFETFIFDFAGDLYGETVEVALVSRLRGEAKFDSAGALVAQMDRDAEEARAV 314

Query: 309 LESSYPLSERDRIICF 324
           L    PLS  DR + F
Sbjct: 315 LAEIVPLSPLDRALSF 330


>gi|49474573|ref|YP_032615.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           quintana str. Toulouse]
 gi|49240077|emb|CAF26514.1| Riboflavin biosynthesis protein ribf [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 201/317 (63%), Gaps = 5/317 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           LP   +G V+A+GNFDG+H GH  +L++A+ +A   N    VL+F PHPR+  QSS+P+ 
Sbjct: 2   LPLDWQGAVLALGNFDGVHCGHQKVLQKALDLARMKNKLALVLTFEPHPRSFFQSSAPVD 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL+ +GF+ +I   F    +  S ++FI  +L + L+V  V+ G  F+FG
Sbjct: 62  RLTEAAEKAEILKILGFNGVIEQPFYAHFSALSVDEFINVILKKALDVSVVVIGDNFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ---IVSSSNIRTALTKGHVLNAAHLLG 187
             ++G   +L +RGE+ GF  V I  + + + Q   ++SSS IR  L++  V  AAHLLG
Sbjct: 122 HQKSGTAHLLCQRGEECGFEVVKIPCVCSTQDQQKRMISSSFIRQLLSQAQVEKAAHLLG 181

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           Y + + S++I GEK+GR LGFPTAN  L P   L  GVYA+R R  +   + GVA+FG  
Sbjct: 182 YHYRVCSNIIQGEKLGRLLGFPTANQILPPQTSLAHGVYAVRLRRANGVLHDGVASFGCR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT++ +G  LLE+++FDF+ ++YG+ CTVSF  +LR + KF  +E L   M  DEK A+ 
Sbjct: 242 PTVIKDGAPLLETYLFDFNDDLYGESCTVSFLQFLRGQEKFDGLEPLITQMQRDEKAAKA 301

Query: 308 ILESSYPLSERDRIICF 324
           IL +  PLS+ DR++ F
Sbjct: 302 ILMTVQPLSQLDRLLTF 318


>gi|265989552|ref|ZP_06102109.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263000221|gb|EEZ12911.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 290

 Score =  262 bits (670), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 130/289 (44%), Positives = 182/289 (62%), Gaps = 2/289 (0%)

Query: 38  LEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKF 95
           +E+A+++A   + P  VL+F PHPR+  +   P+  L+  + + +IL  MGF A++   F
Sbjct: 1   MERALELAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPF 60

Query: 96  TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID 155
           T E +  SAE F+Q +LVE L    V+TG  F FGK R G    L + G+K GF    +D
Sbjct: 61  TAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVD 120

Query: 156 ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
              +    +VSS+ IR  L++G V  AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L
Sbjct: 121 AFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVIHGKKLGRTLGFPTANMAL 180

Query: 216 SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCT 275
           +P   LK G+YA+RFR  D   Y GVA+FGR PT+   G  LLE+F+FDFS ++YG+   
Sbjct: 181 APQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAA 240

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           VSFF +LR E+KF  ++ L   M +DE +AR +L    P+S  DR++ F
Sbjct: 241 VSFFGFLRGEVKFDGLDSLIDQMKQDEAQARALLADVRPISGLDRMLSF 289


>gi|118590690|ref|ZP_01548091.1| hypothetical protein SIAM614_05968 [Stappia aggregata IAM 12614]
 gi|118436666|gb|EAV43306.1| hypothetical protein SIAM614_05968 [Stappia aggregata IAM 12614]
          Length = 332

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 187/318 (58%), Gaps = 4/318 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  IE   + P  LKGG+VAIGNFDG+H GH  +L+ A+ + + +  P+  +SF PHPRT
Sbjct: 9   FPVIESLDAFPADLKGGIVAIGNFDGVHRGHRAVLDAALGLGHGTHHPVYAMSFEPHPRT 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   S P+F L+PP  +  +L   G    +   FT   A   A  F+Q +L++ L +   
Sbjct: 69  VFNPSKPVFRLTPPQQKLDLLRLCGLDGALILPFTKAFAGIEANAFVQDILIDTLGISHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FG+ R G    L+  G  +GF    + +  +  ++++SS+ IR +L++G +  
Sbjct: 129 VTGYDFHFGRARQGTPDYLRSAGANHGFGVTIVQQQEDEGAEVISSTRIRESLSRGDIAQ 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+  ++DV HG+K GR LG+PTANM LS    LK+G+YA++ R +  T + GV
Sbjct: 189 ANGLLGYRWFFDADVRHGDKRGRDLGYPTANMSLSEACPLKQGIYAVKVRVE-GTWHDGV 247

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR PT   NG  L E F+FDF+ ++YG+   V    YLR E KF  +E L   M  D
Sbjct: 248 ASYGRRPTF-DNGAALFEVFLFDFTGDLYGKTLRVHLVSYLRGEEKFDTVEALIAQMDRD 306

Query: 302 EKKARKILESSYPLSERD 319
            ++AR  L S  PLSE D
Sbjct: 307 SEEARAALGSLQPLSELD 324


>gi|49476007|ref|YP_034048.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           henselae str. Houston-1]
 gi|49238815|emb|CAF28095.1| Riboflavin biosynthesis protein ribf [Bartonella henselae str.
           Houston-1]
          Length = 322

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 204/317 (64%), Gaps = 5/317 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           LP   KG V+A+GNFDG+H GH ++L++A+ +A   N P  VL+F PHPR+  Q S+PI 
Sbjct: 2   LPLVWKGAVLALGNFDGVHCGHQVVLQKALDLARMRNKPALVLTFEPHPRSFFQHSAPID 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +I + +GF+ +I   F    A  SA++FI  +L +  EV  V+TG  F+FG
Sbjct: 62  RLTEAPEKAEIFKILGFNGVIEQPFDAHFAALSADEFINVILKKAFEVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTV---FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           + ++G+  +L ++GE++GF  V    +    N++S I+SSS IR  L++G V  AA LLG
Sbjct: 122 RQKSGNSRLLCQKGEEWGFEVVQIPCVSSAPNSQSVIISSSVIRKLLSQGQVEKAARLLG 181

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           Y + + S++I GE++GR LGFPTAN  L P   L  GVYA+R R  +   Y GVA+FG  
Sbjct: 182 YHYRVRSNIIQGEQLGRLLGFPTANQILPPQASLAYGVYAVRLRRANGVLYDGVASFGCR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+V N    LE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M  D+KKA+ 
Sbjct: 242 PTVVKNAAPFLETYLFDFNGDLYGENCTVSFFQFLRKQEKFDGLEPLIAQMHHDKKKAKA 301

Query: 308 ILESSYPLSERDRIICF 324
           IL +  PLS+ D+++ F
Sbjct: 302 ILAAVQPLSQLDQLLTF 318


>gi|307941700|ref|ZP_07657055.1| riboflavin biosynthesis protein RibF [Roseibium sp. TrichSKD4]
 gi|307775308|gb|EFO34514.1| riboflavin biosynthesis protein RibF [Roseibium sp. TrichSKD4]
          Length = 332

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/318 (38%), Positives = 187/318 (58%), Gaps = 3/318 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  I     +P+ LKGGVVAIGNFDG+H GH  +L  A++   N   P+  +SF PHPR+
Sbjct: 9   FFRITSLDEMPDALKGGVVAIGNFDGVHRGHQAVLNTALETGRNQDIPVYAMSFEPHPRS 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
               S+P+F L+P   +  +++  G   ++   FT + A+  AEQF++ +L++ L +   
Sbjct: 69  FFNPSNPVFRLTPSVQKAAVMKACGLDGIVELPFTKDFASIEAEQFVKNILLDKLAIHHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK RAG    L+  G ++ F    +++  +  +  +SSS IR  L +G +  
Sbjct: 129 VTGFDFHFGKARAGTPDYLRNAGAEHQFGVTIVEQETDEGANDISSSRIRACLEEGDITL 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+  E++V HG+K GR LG+PTAN+Q++ +  LK GVY +R  T D   + GV
Sbjct: 189 ANGLLGYRWFFEAEVRHGDKRGRDLGYPTANLQMAENCPLKHGVYTVRVTTPDGFVFGGV 248

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR P M  +G  + E F+FDF+ ++YGQ   V+   YLR E  F  ++ L   M  D
Sbjct: 249 ASYGRRP-MFDHGAPMFEVFLFDFTGDLYGQTLRVNVISYLRGEETFDSVDALIAQMDRD 307

Query: 302 EKKARKILESSYPLSERD 319
             +A+ +L S  PLSE D
Sbjct: 308 SNEAKTVLGSLQPLSELD 325


>gi|254503034|ref|ZP_05115185.1| riboflavin biosynthesis protein RibF [Labrenzia alexandrii DFL-11]
 gi|222439105|gb|EEE45784.1| riboflavin biosynthesis protein RibF [Labrenzia alexandrii DFL-11]
          Length = 332

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 182/318 (57%), Gaps = 4/318 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F   E  +S P  LKGGVVAIGNFDG+H GH  +L+ A+ +   +  P+  +SF PHPRT
Sbjct: 9   FQIAESLESFPASLKGGVVAIGNFDGVHRGHRAVLDAALGLGRGTHHPVFAMSFEPHPRT 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   + P+F L+PP ++ ++L   G    +   FT + A   A  F+Q +L++ L +   
Sbjct: 69  VFNPAKPVFRLTPPPLKTEMLRVCGLDGALILPFTKDFAAVDANAFVQDILIDTLGISHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FG+ R G    L+  G ++GF    +    +  + ++SSS IR  L  G +  
Sbjct: 129 VTGYDFHFGRARQGTPDYLRAAGAQHGFGVTIVQREEDENADVISSSRIRDNLATGDMAE 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+  ES V HG+K GR LG+PTAN+++  D  L +G+YA++ +   +  Y GV
Sbjct: 189 ANALLGYRWFFESQVQHGDKRGRDLGYPTANLRMPEDCPLLQGIYAVKVKVG-ENWYGGV 247

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR PT   NG  L E ++FDF  ++YG+   V    YLR E KF + E L   M  D
Sbjct: 248 ASYGRRPTF-DNGAALFEVYLFDFKGDLYGKTLRVHVVSYLRGEAKFDNAEALISQMDRD 306

Query: 302 EKKARKILESSYPLSERD 319
            ++AR  L S  PLSE D
Sbjct: 307 SEEARAALASLQPLSEID 324


>gi|298293831|ref|YP_003695770.1| riboflavin biosynthesis protein RibF [Starkeya novella DSM 506]
 gi|296930342|gb|ADH91151.1| riboflavin biosynthesis protein RibF [Starkeya novella DSM 506]
          Length = 316

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 5/311 (1%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHP 59
           H F  +   ++LP  L   VVAIGNFDG+H GH  ++  A+  A +   P   ++F PHP
Sbjct: 9   HPFRVLRDPETLPPALANPVVAIGNFDGVHRGHRAVIGTAVDQARSLGRPALAVTFEPHP 68

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R   + + P+F L+P +++   L   G    +   F    A   AE F+  VLV  L V 
Sbjct: 69  RAFFRPAEPMFRLTPGAMKLDRLAGTGLDGAVVLTFDAGLAGLDAETFVSDVLVGRLGVA 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FGK R G    L++ G ++GF    +  L +  +Q V+SS IR AL +G V
Sbjct: 129 MVVAGFDFHFGKGRGGSPAFLREAGRRHGFAVEIVAPLLDEGAQ-VASSVIRAALAQGRV 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             AAH+LG  + IE++VIHG+K GR LG+PTANM+L P + L  G+YA+     D  +  
Sbjct: 188 EQAAHMLGSPWEIEAEVIHGDKRGRNLGYPTANMRLDPAVTLAHGIYAVTVEI-DGVTRK 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVA+FGR PT     P  LE+FIFD+  ++YG+   V+F  YLRPE+KF  +E L   M 
Sbjct: 247 GVASFGRRPTFDDGAP-RLETFIFDYEGDLYGRVLRVAFHAYLRPELKFDSVEALIAQMN 305

Query: 300 EDEKKARKILE 310
           ED  +AR  L+
Sbjct: 306 EDSARARAALD 316


>gi|304393176|ref|ZP_07375104.1| riboflavin biosynthesis protein RibF [Ahrensia sp. R2A130]
 gi|303294183|gb|EFL88555.1| riboflavin biosynthesis protein RibF [Ahrensia sp. R2A130]
          Length = 328

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 189/326 (57%), Gaps = 4/326 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  F    + +++P+ L GGVVAIGNFDG+H GH ++L +A+  A  +  P   LSF PH
Sbjct: 1   MSAFQLHNLTENVPDSLAGGVVAIGNFDGVHRGHQVVLGRALNEARKAGVPALALSFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  SP+F L+    +  I+E  G   L+   FT E A   AE F+  +L      
Sbjct: 61  PRTLFKPQSPVFRLTAEQDKAGIVEAFGMDGLLTLPFTKELAGTEAEAFVTDILRGRAAA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++TG  F FGK RAG    LQ+ G++ GF    + E        +SSS IR  L  G 
Sbjct: 121 SHLVTGFNFHFGKGRAGSPEFLQEVGQRDGFGVTTV-EAEEEGGDAISSSRIRRQLGAGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+ +   V+ G ++GRTLG+PTAN+ L+ +  L  G+YA+R R  D + +
Sbjct: 180 VAAAADLLGYRWRVGGTVVKGAQLGRTLGYPTANLALAENCRLAHGIYAVRLRRADGSLH 239

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT   NG  LLE+F+FDFS ++YG+R  VS F++LR E KF   E L   M
Sbjct: 240 DGVASFGRRPTF-DNGAPLLETFVFDFSDDLYGERIEVSLFEHLRGEEKFDSAEALVEQM 298

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             D + ARK L ++ PLS  D  + F
Sbjct: 299 DRDSEAARKALAAATPLSNLDERLSF 324


>gi|218463288|ref|ZP_03503379.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli Kim 5]
          Length = 220

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/219 (48%), Positives = 144/219 (65%)

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV 165
            FI  +L +WL    V+TG  F FG+ R G    L   G+ YGF    ID  R+  + +V
Sbjct: 1   DFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVV 60

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGV 225
           SSS+IR  L  G+V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+
Sbjct: 61  SSSHIRALLKDGNVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGI 120

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           YA+RFR QD T +  VA++GR PT+  NG  LLE+F+FDFS ++YGQ C VSFF Y+RPE
Sbjct: 121 YAVRFRRQDGTLHDAVASYGRRPTVTENGAPLLETFLFDFSGDLYGQLCAVSFFGYIRPE 180

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           +KF  ++ L   +  DE++AR +L    PL + DR +CF
Sbjct: 181 LKFDGLDPLVAQIRRDEEEARALLAGVKPLGDLDRKLCF 219


>gi|154245787|ref|YP_001416745.1| riboflavin biosynthesis protein RibF [Xanthobacter autotrophicus
           Py2]
 gi|154159872|gb|ABS67088.1| riboflavin biosynthesis protein RibF [Xanthobacter autotrophicus
           Py2]
          Length = 316

 Score =  229 bits (583), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 175/302 (57%), Gaps = 5/302 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
           +  LP  L   VVAIGNFDG+H GH  + + A  +A  +  P   ++F PHPRT    +S
Sbjct: 15  HAQLPPALARPVVAIGNFDGVHRGHRAVFDTARAMAAEAGVPAIAVTFEPHPRTFFNPAS 74

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             F L+P + + + + + G    +   F  + A   AE F+++VLV    V  V  G  F
Sbjct: 75  APFRLTPEARKLRHIAESGLQGAVVLPFDAQLAAMEAEDFVREVLVGRYNVTGVSVGFDF 134

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG+ RAG    L+  G ++GF    +  +R+    I SS+ IR+AL  G V +AAH+LG
Sbjct: 135 HFGRARAGSPAFLEDAGRRHGFKVTVVPPMRDEDDAI-SSTAIRSALASGQVGHAAHMLG 193

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             F + ++VIHG+K GRT+GFPTAN+ L+ D+ L  G+YA+R  T     + GVAN+GR 
Sbjct: 194 RPFAVAAEVIHGDKRGRTIGFPTANLALAEDMDLAFGIYAVRAATP-LGRFDGVANYGRR 252

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT   NG  LLE  +FDFS ++YG    V F  YLRPE+KF  I+ L   +  D ++AR+
Sbjct: 253 PTF-DNGRPLLEVHLFDFSGDLYGATLEVEFHAYLRPELKFDGIDALVAQIAADARQARE 311

Query: 308 IL 309
           +L
Sbjct: 312 VL 313


>gi|158421722|ref|YP_001523014.1| riboflavin kinase [Azorhizobium caulinodans ORS 571]
 gi|158328611|dbj|BAF86096.1| riboflavin kinase [Azorhizobium caulinodans ORS 571]
          Length = 328

 Score =  226 bits (575), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/311 (40%), Positives = 176/311 (56%), Gaps = 5/311 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  ++  + LP  L   V+AIGNFDG+H GH  ++  A  +      P   L+F PHPR+
Sbjct: 19  FQVVQGIRPLPEPLARPVLAIGNFDGVHRGHQAVIATARAMGARLGRPTLALTFEPHPRS 78

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             Q S P+F L+P   +   LE  G +  I   F    A  SAE F+ +VLV    +   
Sbjct: 79  FFQPSVPLFRLTPAREKLDALEATGLAGAIVLPFDGTLAALSAEAFVAEVLVGTFGIAGA 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  F FGK R+G    L+++G ++GF    ++ L      I SS+ IR AL  G V +
Sbjct: 139 AVGFDFHFGKARSGSPAFLKEQGAQHGFPVEVVEALLEADDTI-SSTAIRRALESGQVGH 197

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AAH+LG  +++ S VIHG+K GR LG+PTAN+ L  +I L  G+YA++  T D   +  V
Sbjct: 198 AAHMLGRHWSLRSVVIHGDKRGRDLGYPTANLALPEEIQLAFGIYAVKL-TVDGIPHDAV 256

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR PT   NG  LLE  IFDFS ++YG+   V+F  YLRPE+KF  +++L   M  D
Sbjct: 257 ASYGRRPTF-DNGRALLEVHIFDFSGDLYGREVEVAFHGYLRPELKFSSVDELVRQMDAD 315

Query: 302 EKKARKILESS 312
            + AR IL +S
Sbjct: 316 SRAARAILAAS 326


>gi|296445033|ref|ZP_06886994.1| riboflavin biosynthesis protein RibF [Methylosinus trichosporium
           OB3b]
 gi|296257454|gb|EFH04520.1| riboflavin biosynthesis protein RibF [Methylosinus trichosporium
           OB3b]
          Length = 325

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 6/313 (1%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHP 59
           H F      Q+ P  L G VVAIGNFDG+H GH  ++  A  +A +   P  +L+F PHP
Sbjct: 9   HPFIVARDPQAPPAGLAGAVVAIGNFDGLHRGHRGVIAHAQALARSLGKPCALLTFEPHP 68

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +    S IF L+PP  +  +L ++G   ++   F  + A     +F +++L   L V 
Sbjct: 69  ADVFAGRSVIFRLTPPDAKAALLARLGLDGMVILTFDKDFAARPPREFTEEILARRLGVS 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTK 176
             + G  F FG  RAG+   L+  GE+ GF    +  +  +++   + VSS+  R AL  
Sbjct: 129 AAVAGYDFCFGAKRAGNPDFLRAEGERLGFAVEIVPRVTQDEAGSLEAVSSTATREALQS 188

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G V  AA LLG+ + +E  V  G K+GRTLGFPTAN+ L P   L+ G+YA+        
Sbjct: 189 GDVELAARLLGHPYFVEGVVQEGRKLGRTLGFPTANIALDPSSRLRHGIYAVTLEAGG-V 247

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVANFGR PT+   G  LLE F+FDF  ++YG+   V+F  ++R E KF  ++ L  
Sbjct: 248 VREGVANFGRRPTVEEQGAPLLEVFVFDFDGDLYGETVEVAFIGFIRGEAKFPSLDALTA 307

Query: 297 YMGEDEKKARKIL 309
            M +D +KAR+IL
Sbjct: 308 QMRDDAQKAREIL 320


>gi|182678310|ref|YP_001832456.1| riboflavin biosynthesis protein RibF [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634193|gb|ACB94967.1| riboflavin biosynthesis protein RibF [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 326

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 178/308 (57%), Gaps = 9/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           Q  P  L G V+AIGNFDG+H GH  ++++A  +A     P  VL+F PHP         
Sbjct: 17  QEPPAGLAGAVIAIGNFDGVHRGHLAVIKRAEALAARLGRPCAVLTFEPHPTDYFSGDHS 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +F L+P   + K LE++G   +I   F    A+ +AE F+ ++L+  L V  V+ G  F 
Sbjct: 77  VFRLTPLKDKAKTLERLGLDGMIVIPFNAGLASLAAEDFVTEILLRRLAVSAVVAGYDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALTKGHVLNAAHL 185
           FG  R G    L++ G+++GF    ++ + +   N ++  SS+  R AL  G V +A HL
Sbjct: 137 FGAGRKGTPDFLKQAGQRHGFEVEIVERIASDAENSTEAASSTGTRLALETGDVDHATHL 196

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS---YSGVA 242
           LG+ +TI  +V+HG+++GR LGFPTAN++  P   L+ GVYA+R   + +     + GVA
Sbjct: 197 LGHPYTITGEVLHGQELGRQLGFPTANLRPDPSCRLRHGVYAVRALIEGEVPERMHEGVA 256

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N+GR PT V +G  LLE F+ DF+ ++Y +   V F  ++R E KF  ++ LK  + +D 
Sbjct: 257 NYGRRPT-VDHGAPLLEIFLLDFTGDLYSKIVEVFFIGFIRGEEKFASLDALKAQIAKDV 315

Query: 303 KKARKILE 310
           + AR IL+
Sbjct: 316 ESARAILK 323


>gi|83859464|ref|ZP_00952985.1| Riboflavin kinase [Oceanicaulis alexandrii HTCC2633]
 gi|83852911|gb|EAP90764.1| Riboflavin kinase [Oceanicaulis alexandrii HTCC2633]
          Length = 310

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 172/313 (54%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+H       LP   +G V A+GNFDG+H GH  ++E A   A   ++P     F PH
Sbjct: 1   MAVYHGY---SDLPELSRGCVAALGNFDGVHRGHRAVIETACAFAKSLDAPCAAAVFAPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    +P F L   S + + L+  G  A+    F+ + A  + E F++ VL + L +
Sbjct: 58  PRQVFAPDAPPFLLMSDSQRVRALKAAGAEAVFHIPFSRDMAAMTPEVFVRDVLADGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKG 177
           K V+TG  F FGKDRAGD   L+  GE+YG      D +   + S  +SS+N+R AL +G
Sbjct: 118 KGVVTGADFCFGKDRAGDAEALKTLGERYGVAVKIADAVNLEDASGKISSTNVRNALREG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  AA LL   F IE +V  G++ GR LGFPTAN+ L   +  K GVYA+R       +
Sbjct: 178 DVKTAAALLDRPFAIEGEVSQGDQRGRLLGFPTANIALGEYLRPKFGVYAVRAHLPSGRT 237

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G  PT+  NG    LE+ +FDFS ++YGQ   V   D++RPE KF  ++ LK 
Sbjct: 238 VPGVANLGSRPTV--NGTEARLEAHLFDFSGDLYGQVLEVELIDFIRPEQKFDGLDALKA 295

Query: 297 YMGEDEKKARKIL 309
            +  D   AR++L
Sbjct: 296 QIAADSATARQML 308


>gi|154251097|ref|YP_001411921.1| riboflavin biosynthesis protein RibF [Parvibaculum lavamentivorans
           DS-1]
 gi|154155047|gb|ABS62264.1| riboflavin biosynthesis protein RibF [Parvibaculum lavamentivorans
           DS-1]
          Length = 312

 Score =  218 bits (555), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 174/307 (56%), Gaps = 7/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P  L+G V A+GNFDG+HLGH  ++ +A ++A    +P+ VL F PHP+       P
Sbjct: 8   EHVPPGLRGAVYALGNFDGVHLGHQQVIGKAAEVARELGAPLGVLVFEPHPQQFFFPERP 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L+P   + ++LE +G   L    F    A   A +F+  VLV  L    ++ G  FR
Sbjct: 68  FFRLTPFRAKARLLEGLGVDILAALPFDAHMAQKLAPEFVLDVLVNGLHAVHIVAGYDFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R GD   L   GE  GF    ++E++       SS+ IR  L KG    AA LLG+
Sbjct: 128 FGKGRGGDVAALSYMGEMEGFGVSIVEEVQAG-GVTYSSTRIRELLAKGDPRGAADLLGH 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFG 245
            +T+E+ +  G++ GRT+GFPTAN+ L   +    GVYA++   +D   + +Y+GVANFG
Sbjct: 187 WWTVETHIQQGDQRGRTIGFPTANLPLGDHVQPALGVYAVKVEIEDGPHKGTYNGVANFG 246

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           R PT      +LLE  IFDF  ++YG    +SF +YLRPE KF  +E LK  + +D +KA
Sbjct: 247 RRPTFDKQ-DVLLEVHIFDFDGDLYGVHAAISFIEYLRPEQKFDGLESLKAQIAKDSEKA 305

Query: 306 RKILESS 312
           R +L  S
Sbjct: 306 RTLLAGS 312


>gi|170740462|ref|YP_001769117.1| riboflavin biosynthesis protein RibF [Methylobacterium sp. 4-46]
 gi|168194736|gb|ACA16683.1| riboflavin biosynthesis protein RibF [Methylobacterium sp. 4-46]
          Length = 321

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 165/303 (54%), Gaps = 5/303 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSS 67
            + +P  L+G V AIGNFDG+H GH  ++    ++A +   P  VL+F PHPR       
Sbjct: 7   GEPVPAALRGAVAAIGNFDGLHRGHLALVAAVREMAADRGGPSAVLTFEPHPRDFFAPDR 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P+F L+    +  IL ++G   +   +F    A  SA  F+  +L   L +  V+ G  F
Sbjct: 67  PVFRLTGEGAKLAILARLGLDGVFLRRFDSALAGTSAAGFVTGLLKRDLGLAGVVIGHDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLL 186
            FG+ R G  G+L+    + G     ID +     +  VSSS IR AL  G +  A HLL
Sbjct: 127 HFGRGREGTPGLLRALCAENGLACRVIDPVAAGGGEAPVSSSAIRAALAAGDIALANHLL 186

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+R+ +E +V HG+K GR LGFPTAN+ L P   L  G+YA+R R  D T   G A++GR
Sbjct: 187 GFRWFVEGEVRHGDKRGRVLGFPTANLAL-PACGLAHGIYAVRARLPDGTMRDGAASYGR 245

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT   NG  LLE+ +FDFS ++YG+R  V F  YLR E +F   E L   M  D  +AR
Sbjct: 246 RPTF-DNGAPLLETTLFDFSGDLYGRRLAVEFVAYLRGEARFDSAEALVAQMHRDAAEAR 304

Query: 307 KIL 309
            +L
Sbjct: 305 LVL 307


>gi|312143660|ref|YP_003995106.1| riboflavin biosynthesis protein RibF [Halanaerobium sp.
           'sapolanicus']
 gi|311904311|gb|ADQ14752.1| riboflavin biosynthesis protein RibF [Halanaerobium sp.
           'sapolanicus']
          Length = 307

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 170/293 (58%), Gaps = 8/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDG+H GH LI+E+ I+ A  N  P  VLSFNPHP  +I   +P   L     +
Sbjct: 18  VIAIGAFDGLHKGHQLIIEKCIETAKLNQLPSAVLSFNPHPLEVIPDQTPPPALVSRKQK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ILE MG       KF  E A  SA +F++ +L E L++ TV+ G+ FRFGK+   +  
Sbjct: 78  LSILENMGLDYYFEQKFDEEFAGLSAVEFVENILTEKLKLDTVVVGSDFRFGKNNEANVE 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           IL K  + +GF T  I +L  N+ +I SS+ IR  L KG +  A  LLG  F I   V+H
Sbjct: 138 ILNKLADIHGFKTKIISQLNANEDRI-SSTRIRNLLQKGKLNKAEELLGRPFQICGRVVH 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PL 256
           G+KIGR LGFPTAN++L  D +L   GVYA+    + Q  + G AN G NPT   NG   
Sbjct: 197 GKKIGRKLGFPTANLKLESDYVLPPLGVYAVEVHYKGQ-RFCGAANIGDNPTF--NGVNT 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             E FI DF  ++Y +R  V   +Y+RPE +F D+E+LK  M +D    RKIL
Sbjct: 254 SFEIFILDFKDKLYQKRLCVDLVEYIRPEKEFADVEELKEQMRKDVLYTRKIL 306


>gi|148253247|ref|YP_001237832.1| FMN adenylyltransferase / riboflavin kinase [Bradyrhizobium sp.
           BTAi1]
 gi|146405420|gb|ABQ33926.1| FMN adenylyltransferase [Bradyrhizobium sp. BTAi1]
          Length = 326

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 176/328 (53%), Gaps = 17/328 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F  I       + +KG VVA+GNFDG+HLGH  ++E A+++  ++  P   L+F PH
Sbjct: 1   MAAFTIIRDTTPPADIIKGAVVAMGNFDGVHLGHRAVIEAAVEMGKSHGRPALALTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     ++P F L+    + ++L   G    +   F    A  SA+ FI   L+  L V
Sbjct: 61  PRRFFSPNTPQFRLTDERAKLRLLAGTGLQGAVVMTFDKGRAQTSAQDFIHHELIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTA 173
             +  G  F FGK R G   +L     K G        V IDE      + VSS+ IR A
Sbjct: 121 AGIAVGYDFHFGKGRVGSPTLLASEAPKLGIEVDVQPHVDIDE------RPVSSTAIREA 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF--- 230
           L +G V  A  +LG  + + S+VIHGEK GR LG+PTANM+L  D  L+ G+YA+R    
Sbjct: 175 LAEGQVAEATAMLGGPWFVTSEVIHGEKRGRDLGYPTANMRLDRDCGLRHGIYAVRVGRG 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           R  ++    GVANFGR PT   NG  LLE+F+FDF   +YG+   ++F  ++R E KF  
Sbjct: 235 RGANRVLIDGVANFGRRPTF-DNGAPLLETFLFDFKDSLYGEVLDIAFIGFIREEAKFSS 293

Query: 291 IEKLKIYMGEDEKKARKILESSYPLSER 318
           IE L   M +D  KAR +L+++  L  R
Sbjct: 294 IEALIRQMDDDSAKARALLQANAGLFPR 321


>gi|16124956|ref|NP_419520.1| riboflavin biosynthesis protein RibF [Caulobacter crescentus CB15]
 gi|221233677|ref|YP_002516113.1| riboflavin kinase/FMN adenylyltransferase [Caulobacter crescentus
           NA1000]
 gi|13421926|gb|AAK22688.1| riboflavin biosynthesis protein RibF [Caulobacter crescentus CB15]
 gi|220962849|gb|ACL94205.1| riboflavin kinase/FMN adenylyltransferase [Caulobacter crescentus
           NA1000]
          Length = 313

 Score =  215 bits (547), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 116/307 (37%), Positives = 171/307 (55%), Gaps = 7/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
           ++LP   +G  VA+GNFDG+H GH  ++ QA K A  + +P+ V+SF+PHPR + + S P
Sbjct: 10  KNLPPEHRGASVALGNFDGVHRGHQQVIAQAAKAALTDKTPLGVISFDPHPRRLFRPSEP 69

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L     Q + L  +G        F  E A++S  +F++KVLVE L V  V  G    
Sbjct: 70  AFKLMTQGQQARALAGLGVGVFYLLPFDFEMASFSDREFVEKVLVEGLGVTHVAAGFDIS 129

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG+ R G   +L+  G++YGF     + +     +  SS+ +R AL  G    AA +LG 
Sbjct: 130 FGRGRTGSPELLRTYGQEYGFTVSIAEPVAGGDGEKFSSTGVRDALRGGQPEQAAAILGR 189

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F IE  V  G+++GR LGFPTAN+++   ++ K GVYA R R  D     GVAN G NP
Sbjct: 190 PFAIEGVVRRGQQLGRQLGFPTANVEVEDYVVPKLGVYATRTRLPDGREVPGVANLGNNP 249

Query: 249 T--MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T  +V      LE+++FDF +++YGQ        +LRPE+KF  +E +   +  DE+ AR
Sbjct: 250 TTGLVET---RLETWLFDFDEDLYGQIIETDLVAFLRPELKFDSLELMIEQIRRDEQAAR 306

Query: 307 KILESSY 313
            I+   +
Sbjct: 307 AIVAPGF 313


>gi|299134231|ref|ZP_07027424.1| riboflavin biosynthesis protein RibF [Afipia sp. 1NLS2]
 gi|298590978|gb|EFI51180.1| riboflavin biosynthesis protein RibF [Afipia sp. 1NLS2]
          Length = 328

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/316 (37%), Positives = 176/316 (55%), Gaps = 10/316 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            + H+      +P   +G V+A+GNFDG+HLGH  ++  A KIA ++      LSF PHP
Sbjct: 7   QIIHDTTPPADIP---RGAVIALGNFDGVHLGHRTVIAAAQKIAKSAGQKAFALSFEPHP 63

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R+    ++  F L+    + ++L   G    +   F    A  SA+ FI + LV  L V 
Sbjct: 64  RSFFNPAAAHFRLTNEQAKLRLLAGTGLDGAVVLDFNAARAATSAQDFINQELVRRLGVS 123

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FGK R+G    L ++GE+ G   V I    +     +SSS IR +L +G +
Sbjct: 124 GISVGDDFHFGKGRSGSPATLAEQGERLGI-KVHIQSHVDLSGLPISSSAIRASLAEGRI 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQT 236
            +A  +LG  + +   VI GEK GR LG+PTAN++L P + LK G+YA+R       D  
Sbjct: 183 RDATAMLGGPWFVSGTVIPGEKRGRELGYPTANIRLDPHVDLKHGIYAVRVGLGGGTDPQ 242

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + GVA++GR PT   NGP LLE F+FDF+ ++YGQ   V+F +YLR E+KF  I  L  
Sbjct: 243 RFDGVASYGRRPTF-DNGPPLLEVFLFDFNADLYGQTLDVAFIEYLRDELKFDSIPALIR 301

Query: 297 YMGEDEKKARKILESS 312
            M +D  +AR +LE++
Sbjct: 302 QMDDDSLRARAVLEAA 317


>gi|323135809|ref|ZP_08070892.1| riboflavin biosynthesis protein RibF [Methylocystis sp. ATCC 49242]
 gi|322398900|gb|EFY01419.1| riboflavin biosynthesis protein RibF [Methylocystis sp. ATCC 49242]
          Length = 317

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 166/303 (54%), Gaps = 7/303 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           S P  L G V A+GNFDG+H GH  ++ +A  +A     P  +L+F PHP  +    S I
Sbjct: 14  SPPAGLDGAVAALGNFDGLHRGHRGVVARAQALAKKLGKPCALLTFEPHPADVFAGQSVI 73

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           F L+PP  +     ++G   +I   F    A   A +F +++LV+ L +  V+ G  FRF
Sbjct: 74  FRLTPPDAKAAQAARLGLDGMIVLTFDRAFAARPAREFTEEILVKRLGLSAVVAGYDFRF 133

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHLL 186
           G  R G    L   G + GF    +D +  ++    + VSS+  R  L KG V  A  LL
Sbjct: 134 GAGREGGPEFLVAEGNRLGFAVEIVDRITQDEDGSLEAVSSTATRELLEKGDVAAARRLL 193

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + +   V HG+K GR LGFPTAN+ L P   L+ G+YA+  +  D  +  GVANFGR
Sbjct: 194 GHPYFVLGRVRHGDKRGRLLGFPTANIALDPSNRLRHGIYAVTLQA-DGVTRDGVANFGR 252

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT   NG  LLE F+FDF  ++YG+   V+F+ ++R E KF  +E L   M +D  +AR
Sbjct: 253 RPTF-DNGAPLLEVFVFDFDGDLYGKEVEVAFYGFIRGEEKFDSVEALIDRMHDDSDRAR 311

Query: 307 KIL 309
           +IL
Sbjct: 312 EIL 314


>gi|126728552|ref|ZP_01744368.1| riboflavin biosynthesis protein RibF [Sagittula stellata E-37]
 gi|126711517|gb|EBA10567.1| riboflavin biosynthesis protein RibF [Sagittula stellata E-37]
          Length = 310

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 169/300 (56%), Gaps = 11/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+HLGH  ++  A + A N+P+ VL+F PHPR      +P F L     
Sbjct: 15  RGASVAIGNFDGVHLGHQAVIGLARQAAPNAPLGVLTFEPHPREYFAPDAPSFRLMSAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    A+ S + F ++VL E L +  V+ G  F FGK R G  
Sbjct: 75  RAARLEKLGVDMLYQLNFNTAMASLSPQAFARRVLCEGLGLVNVVVGADFCFGKGRTGTV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L   GE+ GF  V + +L      +VSS+ IR AL++G   +AA LLG+   IE +VI
Sbjct: 135 SDLIAFGEEMGF-GVTVADLMETDGLVVSSTAIRDALSEGRPRDAAKLLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM---V 251
            GE+ GR LG+PTANM +      K GVYA+    +D   + SY G A+ G  P     V
Sbjct: 194 GGEQRGRELGYPTANMSIDGLHPPKFGVYAVLVDVRDGPHRGSYHGAASVGVRPMFDGEV 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           PN    +E+F+FDF+ ++YG   +V   DYLRPE+KF  ++ L   M  D  KAR ILE+
Sbjct: 254 PN----IETFLFDFTGDLYGATLSVGLVDYLRPELKFDGLDALITQMDADCVKARTILEA 309


>gi|260576478|ref|ZP_05844468.1| riboflavin biosynthesis protein RibF [Rhodobacter sp. SW2]
 gi|259021361|gb|EEW24667.1| riboflavin biosynthesis protein RibF [Rhodobacter sp. SW2]
          Length = 307

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 168/302 (55%), Gaps = 8/302 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  VA+GNFDG+HLGH  +++ A   A   P+ +++F PHPR      +P F
Sbjct: 8   QGLAQADRGASVAMGNFDGVHLGHRSVIDLARGAA---PLGIVTFEPHPREFFAPDAPAF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L +  F    A ++ E F   VL + L V  V+ G  F FG
Sbjct: 65  RLMNAEARANRLAKLGVQQLYQLPFDAVMAAFTPEGFAHDVLAQGLGVSHVVVGRDFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K RAG    LQ  G+K+GF     D +  + ++ VSSS IR AL++G   +AA +LG+  
Sbjct: 125 KGRAGTAADLQAHGDKHGFSVTIADLITLDGAE-VSSSAIRAALSEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRN 247
            I+ +VIHG K GR LGFPTANM ++   L + GVYA++          SY+G A+ G  
Sbjct: 184 RIDGEVIHGAKRGRELGFPTANMSVNGLHLPRIGVYAVKVDVLTGPLAGSYNGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LE+++FDF  +IYGQ  +V+F DYLRPE+KF  +  L   M  D  +AR 
Sbjct: 244 PMFGENQP-NLETYLFDFDGDIYGQHLSVAFVDYLRPEMKFDGLPALITQMTADCHRARA 302

Query: 308 IL 309
           IL
Sbjct: 303 IL 304


>gi|254464154|ref|ZP_05077565.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           Y4I]
 gi|206685062|gb|EDZ45544.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           Y4I]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/300 (40%), Positives = 169/300 (56%), Gaps = 11/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+HLGH  ++E A K    +P+ V++F PHPR      SP F L     
Sbjct: 15  RGATVAIGNFDGVHLGHQSVIELARKAVPGAPLGVMTFEPHPREYFAPDSPPFRLMRAET 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L    F    ++ + E+F + V+ E L ++ V+ G  F FGK RAGD 
Sbjct: 75  RAHRLEKLGVERLYELNFNTALSSLTPEEFARDVISEGLGLRHVVVGADFCFGKGRAGDA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ GE+YGF  V I  L       VSS+ IR AL++G   +A  +LG+   IE  VI
Sbjct: 135 ADLQRFGEQYGF-GVTIAPLMEYSEHAVSSTAIRNALSEGRPADARAMLGHWHRIEGVVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPT---MV 251
            GE+ GR LGFPTANM +      + GVYA+     D   + SY G A+ G  P    +V
Sbjct: 194 GGEQRGRELGFPTANMSIDGLHQPRFGVYAVLVDVLDGPHKGSYFGAASIGVRPMFGGVV 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           PN    +E+++FDFS ++YG   +V   ++LRPE+KF  +E L   M  D  +AR+IL +
Sbjct: 254 PN----IETYLFDFSGDLYGATLSVGLVEFLRPELKFDGLEALTAQMDADCARAREILAA 309


>gi|146278232|ref|YP_001168391.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556473|gb|ABP71086.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 306

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/304 (39%), Positives = 171/304 (56%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  +A+GNFDG+HLGH  +++ A       P+ +++F PHPR +    +P F
Sbjct: 8   QGLEASDRGASIAMGNFDGVHLGHQHVIDLA---RGRGPLGIVTFEPHPREVFAPDAPPF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L    FT + A  + E+F + VL   L V  V+ G  F FG
Sbjct: 65  RLMNAGARANRLAKLGIERLYELPFTRDLAALTPEEFARDVLANGLGVAHVVVGADFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R+G    L   G ++GF     D L+    +I SS+ IRTAL++G   +AA +LG+  
Sbjct: 125 KGRSGTTADLVDLGRRHGFDVTIADLLKVEHLEI-SSTAIRTALSEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRN 247
            IE +V+HG+K GR LG+PTANM +S   L + GVYA++       ++ SY+G A+ G  
Sbjct: 184 RIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPEKGSYAGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LES +FDFS ++YGQ  +V+F DYLRPE+ F D+  L   M  D  +AR 
Sbjct: 244 PMFGTNRP-NLESHLFDFSGDLYGQHLSVAFVDYLRPEMVFDDLPGLVAQMDADCARARD 302

Query: 308 ILES 311
           I+ S
Sbjct: 303 IVGS 306


>gi|217976868|ref|YP_002361015.1| riboflavin biosynthesis protein RibF [Methylocella silvestris BL2]
 gi|217502244|gb|ACK49653.1| riboflavin biosynthesis protein RibF [Methylocella silvestris BL2]
          Length = 329

 Score =  212 bits (540), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/312 (38%), Positives = 173/312 (55%), Gaps = 12/312 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           QS P  L+  VVAIGNFDG+HLGH  ++ +A  +A   + P  VL+F PHP    Q    
Sbjct: 17  QSPPEGLESAVVAIGNFDGVHLGHLAVIRRAEALAARLDRPCAVLTFEPHPSDFFQRGRA 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +F LSP   + + L+++G   +I   F    A   A  FI++VL+  L V  V+ G  F 
Sbjct: 77  VFRLSPMQAKARSLKRLGVDGMIVVPFNEALAALPAGHFIEEVLLRRLGVSAVVAGYDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELR--------NNKSQIVSSSNIRTALTKGHVL 180
           FG  R+G    L++ G + GF    +  +          +     SS+ IR AL  G   
Sbjct: 137 FGAGRSGTPAFLREAGARLGFSVEIVGRVNAEGAGSAGGDAPTPASSTAIRAALEVGDAA 196

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG  ++I  +V+ G+K+GR LGFPTAN++  P   L+ G+YA+R        + G
Sbjct: 197 EAARLLGRPYSIVGEVLAGQKLGRELGFPTANIRPDPTCRLRHGIYAVRVDI-GGVLHDG 255

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA+FGR PT V NG  LLE+ +FDFS ++YGQ   V F  ++RPE KF  ++ LK  +  
Sbjct: 256 VASFGRRPT-VDNGEALLEAHVFDFSGDLYGQTLEVFFVGWIRPEEKFASLDALKAQIAA 314

Query: 301 DEKKARKILESS 312
           D  KAR++L +S
Sbjct: 315 DAAKARQMLRAS 326


>gi|239787489|emb|CAX83959.1| Riboflavin biosynthesis protein [uncultured bacterium]
          Length = 323

 Score =  212 bits (539), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 175/306 (57%), Gaps = 9/306 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           LP   +G V+A+GNFDG+H GH +++E A  IA     P  V++F PHPRT+  +    F
Sbjct: 10  LPEETRGAVLALGNFDGVHRGHQIVIETARGIAAREGRPCGVMTFEPHPRTLFSADKEPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P  I+ + +E +G   LI   F  + A +SA +FI+ VL+E L+V+ V+ G  + FG
Sbjct: 70  RLTPFRIKARSIETLGADFLIAQHFDADFAGHSASEFIETVLIENLQVRHVVVGYDYVFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R+GD  +L+      GF T  +D +      + SS+ +R  L +G   +AA LLG  +
Sbjct: 130 KKRSGDVSVLKA---AQGFSTTRVDPVTAPDGDVYSSTRVRACLVEGRPRDAAGLLGRYW 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRN 247
            +E  V  G++ GR +GFPTAN+ L        G YA+R    + Q    + GVANFGR 
Sbjct: 187 EVEGRVERGDQRGRLIGFPTANLHLGEYQRPATGAYAVRAGIDQGQGTVWHDGVANFGRR 246

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+     P ++E  +FDF+ ++Y +   V+  D+LRPE +F  +E LK  + +D  +AR 
Sbjct: 247 PSFDNREP-IMEVHLFDFTGDLYQRHLRVALVDFLRPECRFDGLEALKAQIAQDATQARI 305

Query: 308 ILESSY 313
           +L++ +
Sbjct: 306 LLQTRH 311


>gi|146342886|ref|YP_001207934.1| riboflavin biosynthesis protein ribF/bifunctional flavokinase/FAD
           synthetase [Bradyrhizobium sp. ORS278]
 gi|146195692|emb|CAL79719.1| riboflavin biosynthesis protein ribF; bifunctional : flavokinase;
           FAD synthetase [Bradyrhizobium sp. ORS278]
          Length = 326

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 176/315 (55%), Gaps = 8/315 (2%)

Query: 10  NQSLPNH-LKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSS 66
           + + P H LKG VVA+GNFDG+HLGH  ++E AI++  A   P   L+F PHPR     +
Sbjct: 9   DATPPQHILKGAVVAMGNFDGVHLGHRAVIEAAIEMGRAKGRPALALTFEPHPRRFFSPN 68

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +P F L+  + + ++L   G +  +   F    A  SA+ FI   L+  L V  +  G  
Sbjct: 69  TPQFRLTDEAAKLRLLAGAGLAGAVVMTFDKGRAQTSAQDFIHHDLIGRLGVSGIAVGYD 128

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FGK R G   +L     K G  TV +    +   + VSS+ IR AL +G V  A  +L
Sbjct: 129 FHFGKGRVGSPSLLASEAPKLGI-TVEVQPHVDIDERPVSSTAIREALAEGQVAEATAML 187

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVAN 243
           G  + + ++VIHGEK GR LG+PTANM+L  D  L+ G+YA+R    R  ++    GVAN
Sbjct: 188 GGPWFVTAEVIHGEKRGRDLGYPTANMRLDRDCGLRHGIYAVRVGRGRGANRVLIDGVAN 247

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           FGR PT   NG  LLE+F+FDF   +YG+   V+F  ++R E +F  IE L   M +D  
Sbjct: 248 FGRRPTF-DNGAPLLETFLFDFKDSLYGEVLDVAFIGFIREEARFTSIEALIRQMDDDSA 306

Query: 304 KARKILESSYPLSER 318
           +AR +L ++  L  R
Sbjct: 307 RARAVLAANAGLFPR 321


>gi|294012278|ref|YP_003545738.1| riboflavin kinase [Sphingobium japonicum UT26S]
 gi|292675608|dbj|BAI97126.1| riboflavin kinase [Sphingobium japonicum UT26S]
          Length = 312

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 5/305 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
           +  +P HL+GG++A+GNFDG H GH  ++ +A+ +A +   P  V +F+PHP  + +  +
Sbjct: 7   SAPMPAHLRGGIMALGNFDGFHAGHQAVVRRAVALARDQGRPAIVATFDPHPMRLFRPDT 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    +E++  + G  A++ + FT E A    + F+  +L  W  V  V+TG  F
Sbjct: 67  PWFRLTTLDQRERLFARAGADAMLVFDFTRELAALDPQAFVD-LLARW-GVAGVVTGEDF 124

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG+DRAG    L + G   G     +  +     +I+SS+ IR AL  G    A  LL 
Sbjct: 125 TFGRDRAGSIATLAELGAPLGLTAQAVAPITGQDGEIISSTRIRQALKSGDCETATRLLT 184

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FTIE  V HG+K+GRT+GFPTAN+ +   +    G+YA+R    D     G AN G  
Sbjct: 185 RPFTIEGVVQHGDKLGRTIGFPTANIDMGHYLRPAYGIYAVRALLPDGRVLDGAANLGVR 244

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P++ P    LLE   FDFS+ +Y QR  V    YLRPE K   ++ L   +  D   AR+
Sbjct: 245 PSIDPPKE-LLEPHFFDFSESLYDQRIEVQLIHYLRPEAKLDGLDALMAAIARDCDDARQ 303

Query: 308 ILESS 312
           IL  +
Sbjct: 304 ILAGT 308


>gi|83594295|ref|YP_428047.1| FMN adenylyltransferase / riboflavin kinase [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577209|gb|ABC23760.1| FMN adenylyltransferase / riboflavin kinase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 317

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/302 (39%), Positives = 168/302 (55%), Gaps = 6/302 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           LP  L GG +A+GNFDG+H GH  ++  A  IA     P+ V++F PHPR   Q   P F
Sbjct: 10  LPASLLGGSLALGNFDGVHRGHQRVIGSARAIAAQQGLPLGVMTFAPHPRRFFQPDLPPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           TL+   ++  ++ + G   L    F    +  SAE F+ +VLV+ L V  V+ G  + FG
Sbjct: 70  TLTSFRLKAHLISEEGADFLYVQAFDEALSKGSAEWFVTEVLVKGLHVAHVVVGQDYAFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G   +LQK     GF    +  +++    I SS+ +R  L +G V  AA +LG+ +
Sbjct: 130 HRRQGTVSLLQKMALDLGFGVTAVAPVKDEGGAIYSSTRVRACLQEGDVTTAAQILGHPW 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--QTSY-SGVANFGRN 247
            +E  V HG+K GRT+GFPTAN++L      + GVYA+     D  QT +  GVANFGR 
Sbjct: 190 EVEGRVEHGDKRGRTIGFPTANLKLGDYQRPRAGVYAVTAGLDDGAQTRFRPGVANFGRR 249

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT   NG  LLE  +FD S ++YG+   V F D+LRPE  F  +E LK  +G+D  +AR 
Sbjct: 250 PTF-DNGDALLEVHLFDVSPDLYGRHLRVRFHDFLRPEQTFPGLEALKAQIGQDAAQARA 308

Query: 308 IL 309
           + 
Sbjct: 309 LF 310


>gi|77462855|ref|YP_352359.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides 2.4.1]
 gi|77387273|gb|ABA78458.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 306

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/304 (40%), Positives = 169/304 (55%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR +   +   F
Sbjct: 8   QGLEASDRGASIAMGNFDGVHLGHQHVIDLA---RGRGPLGVVTFEPHPREVFAPNGEPF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L    FT + A  + E F ++VL E L V  V+ GT F FG
Sbjct: 65  RLMNAEARGNRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTHVVVGTDFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + RAG    L + G  +GF     D L    + I SS+ IR ALT+G   +AA +LG+  
Sbjct: 125 RGRAGTAEDLARLGRTHGFEVTVADILTVEGTGI-SSTAIRAALTEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRN 247
            IE +V+HG+K GR LG+PTANM +S   L + GVYA++          SYSG A+ G  
Sbjct: 184 RIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGSYSGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   M  D  +AR+
Sbjct: 244 PMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQMDRDCARARE 302

Query: 308 ILES 311
           IL S
Sbjct: 303 ILGS 306


>gi|126461748|ref|YP_001042862.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103412|gb|ABN76090.1| riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 306

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 169/304 (55%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR +   +   F
Sbjct: 8   QGLEASDRGASIAMGNFDGVHLGHQHVIDLA---RGRGPLGVVTFEPHPREVFAPNGEPF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L    FT + A  + E F ++VL E L V  V+ G  F FG
Sbjct: 65  RLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTHVVVGADFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + RAG    L++ G  +GF     D L    + I SS+ IR ALT+G   +AA +LG+  
Sbjct: 125 RGRAGTAEDLERLGRTHGFEVTVADILTVEGTGI-SSTAIRAALTEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRN 247
            IE +V+HG+K GR LG+PTANM +S   L + GVYA++          SYSG A+ G  
Sbjct: 184 RIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGSYSGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   M  D  +AR+
Sbjct: 244 PMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQMDRDCARARE 302

Query: 308 ILES 311
           IL S
Sbjct: 303 ILGS 306


>gi|167648012|ref|YP_001685675.1| riboflavin biosynthesis protein RibF [Caulobacter sp. K31]
 gi|167350442|gb|ABZ73177.1| riboflavin biosynthesis protein RibF [Caulobacter sp. K31]
          Length = 313

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 174/305 (57%), Gaps = 3/305 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
           + LP   +G  VA+GNFDG+H GH  ++ QA K A    +P+ V++F+PHPR + + + P
Sbjct: 10  KDLPETERGAAVALGNFDGVHRGHQQVIAQAAKAALAGRTPLGVVTFDPHPRRLFRPTEP 69

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L   + Q + LE +G   L    F  E A+++  +F++KVLV  L VK V  G    
Sbjct: 70  AFKLMTHAQQGRALEALGVDLLYLLPFDFEMASFNDREFVEKVLVGGLGVKHVAVGFDIS 129

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG+ R+G   +++  G +YGF     + + N + +  SS+ +R AL  GH   AA +LG 
Sbjct: 130 FGRGRSGSAELMRAYGAEYGFTVSVAEPVANREGEKFSSTGVRDALRDGHPEGAARILGR 189

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F +E  V  G+++GR LGFPTAN+++   ++ + GVYA R R  D     GVAN G NP
Sbjct: 190 PFAVEGVVRRGQQLGRQLGFPTANVEVEDYVVPRLGVYATRTRLPDGREVPGVANLGNNP 249

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T        LE+++FDF +++YGQ        +LRPE+KF  IE +   +  DE+ AR I
Sbjct: 250 T-TGEVETRLETWLFDFDEDLYGQVIETDLIAFLRPELKFDSIELMVEQILRDEQAARAI 308

Query: 309 LESSY 313
           +  ++
Sbjct: 309 VCPTF 313


>gi|148556686|ref|YP_001264268.1| FMN adenylyltransferase / riboflavin kinase [Sphingomonas wittichii
           RW1]
 gi|148501876|gb|ABQ70130.1| FMN adenylyltransferase / riboflavin kinase [Sphingomonas wittichii
           RW1]
          Length = 313

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ 64
           +  ++ LP HL+G VVA+GNFDG H GH  ++  A+    A   P+ V SF+PHP     
Sbjct: 4   LTCDRPLPEHLRGSVVALGNFDGFHRGHQAVVGAAVAHGRATGRPVLVASFDPHPVRFFH 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +P F L+    +  + E+ G  A++ ++F  + A+ SA  F+   L+       V+TG
Sbjct: 64  PDAPPFRLTSLDQRAALFEQAGADAMLVFEFNRQLASVSAPDFVTDWLIGRAGAAHVVTG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FGK RAG+  +L + G  +G     I  + +++   VSSS IR AL  G  + AA 
Sbjct: 124 EDFTFGKGRAGNVRVLAEIGGAHGLTAQAIGPV-SDEGGPVSSSRIREALVAGDPVEAAR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LL   F I+  V HG+K+GRT+GFPTAN+ +   +  K G+YA+R R  D     G AN 
Sbjct: 183 LLTRPFRIQGKVQHGDKLGRTIGFPTANIAMGRYLRPKYGIYAVRGRLPDGRVLDGAANL 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT  P    LLE++ FDF++ +Y Q   V    Y+RPE KF  +E L   M +D  +
Sbjct: 243 GVRPTFDPPKE-LLEAYFFDFAESLYDQCIEVEMIAYIRPEAKFDSLEALTAQMDKDCAE 301

Query: 305 ARKIL 309
           A++IL
Sbjct: 302 AKRIL 306


>gi|119386370|ref|YP_917425.1| riboflavin biosynthesis protein RibF [Paracoccus denitrificans
           PD1222]
 gi|119376965|gb|ABL71729.1| FMN adenylyltransferase / riboflavin kinase [Paracoccus
           denitrificans PD1222]
          Length = 309

 Score =  209 bits (532), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/314 (38%), Positives = 175/314 (55%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + H+    ++LP   +G  VA+GNFDGIHLGH  +++ A + A ++P+ V++F PHPR
Sbjct: 1   MRIHHDW---KALPLDARGATVAMGNFDGIHLGHRSVIDAA-RAACDAPLGVITFEPHPR 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L ++G   L    F    A  + E F ++VLVE L V+ 
Sbjct: 57  EFFAPDAPPFRLMNVESRANRLARLGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRH 116

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  GT F FG+ R+GD   L + G + GF  V +  L  + +   SS+ IR AL +G   
Sbjct: 117 VTVGTDFCFGRKRSGDAQTLARLGREMGF-GVTVAPLIGDGAVQYSSTAIRKALAEGRTR 175

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTS 237
           +A  +LG+   I+ +V+HG+K GR LG+PTANM +    L   G+YA+        D+ S
Sbjct: 176 DAERMLGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGS 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N P  LE  IFDF+ ++YGQ  +V+  +YLRPE KF  +E L   
Sbjct: 236 YKGVASLGVRPMFGENRP-NLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQ 294

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL +
Sbjct: 295 MDRDSARAREILAT 308


>gi|221638725|ref|YP_002524987.1| Riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|221159506|gb|ACM00486.1| Riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides KD131]
          Length = 306

 Score =  208 bits (530), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 169/304 (55%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR +   +   F
Sbjct: 8   QGLEASDRGASIAMGNFDGVHLGHQHVIDLA---RGRGPLGVVTFEPHPREVFAPNGEPF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L    FT + A  + E F ++VL E L V  V+ G  F FG
Sbjct: 65  RLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTHVVVGADFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + RAG    L++ G  +GF     D L    + I SS+ IR ALT+G   +AA +LG+  
Sbjct: 125 RGRAGTAEDLERLGRTHGFEVTVADILTMEGTGI-SSTAIRAALTEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRN 247
            IE +V+HG+K GR LG+PTANM +S   L + GVYA++          SYSG A+ G  
Sbjct: 184 RIEGEVLHGDKRGRNLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGSYSGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LESF+FDFS ++YGQ  +V+F +YLRPE+ F  +  L   M  D  +AR+
Sbjct: 244 PMFGENRP-NLESFLFDFSGDLYGQHLSVAFVEYLRPEMVFDGLPALIAQMDRDCARARE 302

Query: 308 ILES 311
           IL S
Sbjct: 303 ILGS 306


>gi|332557746|ref|ZP_08412068.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides WS8N]
 gi|332275458|gb|EGJ20773.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides WS8N]
          Length = 306

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 168/304 (55%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR +   +   F
Sbjct: 8   QGLEASDRGASIAMGNFDGVHLGHQHVIDLA---RGRGPLGVVTFEPHPREVFAPNGEPF 64

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     +   L K+G   L    FT + A  + E F ++VL E L V  V+ G  F FG
Sbjct: 65  RLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTHVVVGADFCFG 124

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + RAG    L + G  +GF     D L    + I SS+ IR ALT+G   +AA +LG+  
Sbjct: 125 RGRAGTAEDLARLGCTHGFEVTVADILTVEGTGI-SSTAIRAALTEGRPRDAAAMLGHWH 183

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRN 247
            IE +V+HG+K GR LG+PTANM +S   L + GVYA++          SYSG A+ G  
Sbjct: 184 RIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGSYSGAASLGVR 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   M  D  +AR+
Sbjct: 244 PMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQMDRDCARARE 302

Query: 308 ILES 311
           IL S
Sbjct: 303 ILGS 306


>gi|260426202|ref|ZP_05780181.1| riboflavin biosynthesis protein RibF [Citreicella sp. SE45]
 gi|260420694|gb|EEX13945.1| riboflavin biosynthesis protein RibF [Citreicella sp. SE45]
          Length = 310

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 166/297 (55%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+HLGH  ++  A +    +P  VL+F PHPR      SP F L  P  
Sbjct: 15  RGASVAIGNFDGVHLGHQAVIRMAREAGGGAPCGVLTFEPHPREYFAPDSPPFRLMSPEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L    F    A  + E+F ++V+ E L ++ V+ G  F FGK+RAGD 
Sbjct: 75  RTSRLEKLGVERLYELNFNSALAALTPEEFARRVISEGLGLRHVVVGADFCFGKNRAGDV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++ G + GF  V + E+  ++   VSS+ IR ALT G+   AA  LG+   IE  V+
Sbjct: 135 DDLKRFGVEMGF-GVTVAEILEHRGGQVSSTAIRKALTDGNPREAAAQLGHWHRIEGVVV 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTSYSGVANFGRNPTMVPNG 254
            GE+ GR LG+PTANM +      ++GVYA+       + + +Y G A+ G  P    N 
Sbjct: 194 GGEQRGRELGYPTANMSIEGLHPPRQGVYAVVVEVITGEHKGNYHGAASLGVRPMFGENT 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  LE+FIFDF  ++YG   +V   +YLRPE  F  ++ L   M  D  +AR+ILE+
Sbjct: 254 P-NLETFIFDFKGDLYGATLSVGLVEYLRPEQTFDGLDALITQMDADCARAREILEA 309


>gi|86136474|ref|ZP_01055053.1| riboflavin biosynthesis protein RibF [Roseobacter sp. MED193]
 gi|85827348|gb|EAQ47544.1| riboflavin biosynthesis protein RibF [Roseobacter sp. MED193]
          Length = 319

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/304 (38%), Positives = 167/304 (54%), Gaps = 5/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+H GH  +++ A   A  +P+ V++F PHPR      +P F L  P  
Sbjct: 15  RGASVAIGNFDGVHRGHQSVIDLARAAAPQAPLGVMTFEPHPRAFFAPDAPPFRLMSPEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    +    E F +KV+ E L +  V+ G  F FGK R+G  
Sbjct: 75  RASRLEKLGVERLYQLNFNAALSGLPPEDFARKVISEGLGLAHVVVGADFCFGKGRSGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ G + GF  V I  L  + S  VSS+ IRTAL++G   +AA +L +   IE +VI
Sbjct: 135 ADLQRFGAEMGF-GVTIAPLMEHSSDTVSSTAIRTALSEGRPRDAAAMLSHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GR LG+PTANM +        GVYA+     D   + SY G A+ G  P    + 
Sbjct: 194 GGEQRGRDLGYPTANMSIDGLHPPAFGVYAVLVDVLDGPHRGSYQGAASIGVRPMFDGSH 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           P  +E+F+FDF+  +YG   +V+  +YLRPE+KF  +E L   M  D  +AR IL++  P
Sbjct: 254 P-NIETFLFDFTGNLYGATLSVALVEYLRPEMKFDGLEALIAQMDGDCARARHILDAEAP 312

Query: 315 LSER 318
              R
Sbjct: 313 AELR 316


>gi|170747319|ref|YP_001753579.1| riboflavin biosynthesis protein RibF [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653841|gb|ACB22896.1| riboflavin biosynthesis protein RibF [Methylobacterium
           radiotolerans JCM 2831]
          Length = 328

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 159/309 (51%), Gaps = 5/309 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRT 61
           F     +  +P  L G V AIGNFDG+HLGH  +++   A   A   P  +L+F PHPR 
Sbjct: 12  FTICRADAPVPPALAGAVAAIGNFDGVHLGHRTLVDSVRAAARAAGRPSAILTFEPHPRA 71

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                +P+F L+ P+ +E +   +G   LI  +F    A   A  F+   L   L +  V
Sbjct: 72  YFMPDAPMFRLTGPAAKEIVFAHLGLDGLIVRRFDGALAETGARAFVLDFLKGSLGLSGV 131

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVL 180
           + G  F FG+ R G   IL     + G     +  +    ++  VSSS IR AL  G V 
Sbjct: 132 VVGHDFHFGRGREGTPAILADLCREAGMSCRIVAPVALGGETAPVSSSAIRAALAAGDVA 191

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLGYR+ +   V HG+K GR LGFPTAN+ L PD  L  G+YA+R R        G
Sbjct: 192 RANALLGYRWFVLGAVRHGDKRGRQLGFPTANVML-PDCGLAHGIYAVRVRLASGAFRDG 250

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA++GR PT     P LLE+++FDFS ++YGQ   V F  Y+R E +F   E L   M  
Sbjct: 251 VASYGRRPTFDDGAP-LLETYLFDFSGDLYGQDVAVEFVGYIRGEERFASAEALVERMHV 309

Query: 301 DEKKARKIL 309
           D   AR +L
Sbjct: 310 DAATARAML 318


>gi|188579758|ref|YP_001923203.1| riboflavin biosynthesis protein RibF [Methylobacterium populi
           BJ001]
 gi|179343256|gb|ACB78668.1| riboflavin biosynthesis protein RibF [Methylobacterium populi
           BJ001]
          Length = 337

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 153/287 (53%), Gaps = 3/287 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A   P  VL+F PHPR     + P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGPRPAVVLTFEPHPRAFFAPNQPMFRLTGPSAKETVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F  E A  SA+ F++  L + L +  V+ G  F FG+ R G  G L     
Sbjct: 105 GLDGLIVRRFDAELAGTSAQDFVEGWLRDRLGLSGVVIGHDFHFGRGREGSPGTLAALCA 164

Query: 146 KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLTCRIVPAVSADPGDAPISSSAIRAALASGDVARANALLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT     P LLE  +FD
Sbjct: 225 TLGYPTANLALE-SCGLAHGIYAVRVRLADGSLHDGVASYGRRPTFDDGAP-LLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  ++YGQ   V    YLR E +F   E L   M  D  +AR  +++
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEERFSSAEALVTQMDVDSARARAAIQA 329


>gi|114799780|ref|YP_759571.1| riboflavin biosynthesis protein RibF [Hyphomonas neptunium ATCC
           15444]
 gi|114739954|gb|ABI78079.1| riboflavin biosynthesis protein RibF [Hyphomonas neptunium ATCC
           15444]
          Length = 308

 Score =  206 bits (524), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 165/302 (54%), Gaps = 4/302 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + LP   +G  +A+GNFDG+H GH  +++ A + A +   +V +F P PR   +   P F
Sbjct: 8   RGLPQAARGASIALGNFDGLHAGHRAVMDAA-RTAGHGKFSVATFEPPPRAYFRPGDPPF 66

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +  P  +  ++ K G   +    F  E A  + EQF+++VLV+ L V  +  G  FRFG
Sbjct: 67  RILRPERRNALILKAGADTVFELPFNGEMAAMTDEQFVRQVLVDGLGVSHISVGFDFRFG 126

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + R G    L   G   GF    ++E+  + ++  SS+ IR AL  G    AA LLG  +
Sbjct: 127 RGRMGHAQRLASLGRALGFGVTIVEEVSGHGAK-ASSTAIRQALMAGEPDVAAELLGSPW 185

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPT 249
             +  +  GE+ GRT GFPTANM L   I  K GVYA+R R + +  +  GVANFGR PT
Sbjct: 186 IADGIIEPGEQNGRTFGFPTANMALGDLIHPKMGVYAVRLRIEGEDVWRDGVANFGRTPT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                P LLE+FIFDF +EIYG+R  V    Y RPE+KF  ++ +   M  D  KA+ IL
Sbjct: 246 TGLRDP-LLETFIFDFDREIYGERVEVQLIAYQRPELKFPSLDAMIEQMHRDAAKAKDIL 304

Query: 310 ES 311
            +
Sbjct: 305 AA 306


>gi|254460594|ref|ZP_05074010.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           HTCC2083]
 gi|206677183|gb|EDZ41670.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 312

 Score =  206 bits (523), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/299 (41%), Positives = 164/299 (54%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIGNFDG+HLGH  ++E A K      +P  VL+F+PHPR     ++  F L  P
Sbjct: 15  RGASAAIGNFDGVHLGHRAVIEIARKAGEKAGAPCGVLTFDPHPRQYFAPNADPFRLMGP 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +   L K+G   L +  F    A  S E+F  +V+ E   ++ V+ G  F FGKDR G
Sbjct: 75  AAKATELAKIGVERLYQLNFNAALAALSPEEFATRVIHEGFGLQHVVVGADFCFGKDRVG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               LQ  GEK GF  V I EL       VSS++IR AL KG   +AA +LG+   IE  
Sbjct: 135 KAADLQGFGEKLGF-GVTIAELIEGTQGQVSSTSIRQALAKGKPRDAADMLGHWHRIEGI 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ---TSYSGVANFGRNPTMVP 252
           VI GE+ GR LG+PTANM +      + GVYA+    QD      Y GVA+ G  P    
Sbjct: 194 VIGGEQRGRELGYPTANMSIEGLHPPRFGVYAVLVEVQDGPHVGKYHGVASMGVRPMFGI 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           N P  LE+F+FDF+ ++YG   +V+  DYLRPE KF  ++ L   M  D  K+R IL +
Sbjct: 254 NRP-NLETFLFDFTGDLYGATLSVALVDYLRPEEKFDGLDALITQMDADSAKSRAILAA 311


>gi|294677617|ref|YP_003578232.1| riboflavin biosynthesis protein RibF [Rhodobacter capsulatus SB
           1003]
 gi|3128303|gb|AAC16155.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
 gi|294476437|gb|ADE85825.1| riboflavin biosynthesis protein RibF [Rhodobacter capsulatus SB
           1003]
          Length = 307

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 165/298 (55%), Gaps = 8/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VA+GNFDG+HLGH  +++ A       P+ +++F PHPR +    +  F L     
Sbjct: 15  RGASVAMGNFDGVHLGHQSVIDLA---RGREPLGIITFEPHPREVFAPEAAPFRLMNAEA 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E  L K+G + L    F  E A    E F  KVL E L V  V  G  FRFGK RA   
Sbjct: 72  REHRLAKLGVTRLYELPFGPELAGMDPETFAGKVLAEGLGVAHVTVGGDFRFGKGRAAGT 131

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L   G++ GF  V +  L +     VSS+NIR AL +G V +AA +LG+   IE +V+
Sbjct: 132 AELIALGQRLGF-DVTVAPLLHIDGIEVSSTNIRKALAEGRVRDAAKMLGHLHRIEGEVM 190

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTMVPNG 254
           HG+K GR LGFPTANM ++   L K GVYA++          +Y G A+ G  P    N 
Sbjct: 191 HGDKRGRDLGFPTANMSVARLHLPKLGVYAVKVDVLTGPQAGAYFGAASLGVRPMFGENA 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           P  LE+F+FDF  ++YGQ  +V+  +YLRPE+KF  +  L   M  D + AR+IL ++
Sbjct: 251 P-NLETFLFDFEGDLYGQHLSVALVEYLRPEMKFDGLPALMKQMAADCETAREILRTA 307


>gi|114569163|ref|YP_755843.1| riboflavin kinase / FMN adenylyltransferase [Maricaulis maris
           MCS10]
 gi|114339625|gb|ABI64905.1| riboflavin kinase / FMN adenylyltransferase [Maricaulis maris
           MCS10]
          Length = 314

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 5/305 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           +  LP   +G V+A+GNFDG+H+GH  ++  A  +A   ++P+    F+PHPR      +
Sbjct: 7   HSGLPQDDRGAVIALGNFDGVHMGHRHVIGLAADLAQSLDAPLGAALFDPHPRRFFAPDA 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L     + +ILE +G   L    F++  A  +   F+  VL   L +  ++TG  F
Sbjct: 67  PAFRLMGTGRRNRILESLGVQQLHVLPFSMGMARMTPADFVDTVLAGGLGIAGIVTGEDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG  R G    L +    +G  T F  EL  N +  VSS+ IR A+  G +  AA LLG
Sbjct: 127 RFGAGRTGATDDLARLCAGHGIKTAFA-ELHGNGADKVSSTRIRKAIHDGDMQAAATLLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGR 246
             + +E  V  G++ GRT+GFPTAN+ L   +    GVYA+R     D  S +GVAN G+
Sbjct: 186 TPWAVEGVVRRGDQRGRTIGFPTANLTLGDYVRPDYGVYAVRVGIDGDTPSLAGVANIGK 245

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT V     LLE  + D+S ++YG+   V FFD+LR E +F  ++ LK+ + ED   AR
Sbjct: 246 RPT-VDGATELLEVHLLDWSGDLYGRTLEVEFFDHLRSEKRFDGLDALKVQIAEDAAAAR 304

Query: 307 KILES 311
           ++L +
Sbjct: 305 RVLSA 309


>gi|75676725|ref|YP_319146.1| riboflavin kinase / FAD synthetase [Nitrobacter winogradskyi
           Nb-255]
 gi|74421595|gb|ABA05794.1| FMN adenylyltransferase [Nitrobacter winogradskyi Nb-255]
          Length = 327

 Score =  205 bits (522), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/300 (37%), Positives = 166/300 (55%), Gaps = 7/300 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +GGVVA+GNFDG+HLGH  ++  A+++A     P   ++F PHPR     ++P F L+  
Sbjct: 19  RGGVVAMGNFDGVHLGHRAVIAAALRMARLRAKPALAMTFEPHPRKFFSPNTPQFRLTDE 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G +  +   F    A  +A+ FI   L+E L V  V  G  F FGK R G
Sbjct: 79  TGKLRLLAGTGLAGAVVMTFDATRAGTTAQDFIHHDLIERLGVSAVAVGYDFHFGKGRVG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L     + G   V +    + + + VSSS IR AL +  + NA  +LG  + +  +
Sbjct: 139 SPSLLVSEAPRLGIE-VDVQPHVDFEERPVSSSAIRMALAEAQIANATAMLGGPWFVTGE 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRNPTMVP 252
           VIHGEK GR LG+PTAN+ L  D  L+ G+YA+R    + +D   + GVA+FGR PT   
Sbjct: 198 VIHGEKRGRGLGYPTANIHLDRDCGLRHGIYAVRVGHGKGKDHRRFDGVASFGRRPTF-D 256

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           NG  LLE F+FDF  ++YG    V+F  ++R E+KF   E L   M +D   AR  L ++
Sbjct: 257 NGAPLLEVFLFDFQGDLYGAILDVAFIGFIRDELKFDGAEALVRQMDDDAACARIQLAAA 316


>gi|295691025|ref|YP_003594718.1| riboflavin biosynthesis protein RibF [Caulobacter segnis ATCC
           21756]
 gi|295432928|gb|ADG12100.1| riboflavin biosynthesis protein RibF [Caulobacter segnis ATCC
           21756]
          Length = 318

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/321 (37%), Positives = 180/321 (56%), Gaps = 14/321 (4%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPR 60
           +   I+  + LP   +G  VA+GNFDG+H GH  ++ QA K A    +P+ V+SF+PHPR
Sbjct: 2   LLKTIQAWKDLPPEARGASVALGNFDGVHRGHQQVIAQAAKAALAGQTPLGVVSFDPHPR 61

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            + + S P F L     Q + L  +G        F  E A++   +F++KVLVE L VK 
Sbjct: 62  RLFRPSEPAFKLMTHGQQARALAGLGVDVFYLLPFDFEMASFGDREFVEKVLVEGLGVKH 121

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS------QIVSSSNIRTAL 174
           V  G    FG+ R+G   +++  G++YGF TV + E   + S      +  SS+ +R AL
Sbjct: 122 VAVGFDISFGRGRSGSAELMKAYGDEYGF-TVSVAEPVADTSKEGGDGEKFSSTGVRDAL 180

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             GH   AA +LG  F IE  V  G+++GR LGFPTAN+++   ++ + GVYA R R  D
Sbjct: 181 RDGHPEQAARILGRPFAIEGVVRRGQQLGRQLGFPTANVEVEDYVVPRLGVYATRTRLPD 240

Query: 235 QTSYSGVANFGRNPT--MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                GVAN G NPT  +V      LE+++FDF +++YGQ        +LRPE+KF  ++
Sbjct: 241 GREVPGVANLGNNPTTGIVET---RLETWLFDFDEDLYGQIIETDLIAFLRPELKFDSLD 297

Query: 293 KLKIYMGEDEKKARKILESSY 313
            +   +  DE++AR I+  ++
Sbjct: 298 LMIEQIHRDEQQARAIVAPAF 318


>gi|83952835|ref|ZP_00961565.1| riboflavin biosynthesis protein RibF [Roseovarius nubinhibens ISM]
 gi|83835970|gb|EAP75269.1| riboflavin biosynthesis protein RibF [Roseovarius nubinhibens ISM]
          Length = 312

 Score =  205 bits (521), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 169/303 (55%), Gaps = 13/303 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+HLGH  +++ A K   A ++P+ VL+F PHPR      +P F L   
Sbjct: 15  RGASVAIGNFDGVHLGHQAVIDLARKAGEAADAPLGVLTFEPHPRQYFAPEAPPFRLMSA 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   LEK+G   L    F    +  S E+F + VL + L +  V+ G  F FGK R G
Sbjct: 75  EARANRLEKLGVERLYELNFNAALSALSPEEFARNVLCDGLGLAHVVVGADFCFGKGRTG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L++ G + GF     + L  ++ + VSS+ IR AL++G   +AA +LG+   I+  
Sbjct: 135 NAADLKRFGAEMGFGVTVAELLEGDQGE-VSSTAIRQALSEGRPRDAAAMLGHWHRIDGP 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM-- 250
           V+ GE+ GR LG+PTANM ++     K GVYA++    D   +  Y G A+ G  P    
Sbjct: 194 VVGGEQRGRELGYPTANMSIAGLHPPKFGVYAVQIEVMDGPHKGRYHGAASLGIRPMFNG 253

Query: 251 -VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            VPN    LE+F+FDFS ++YG   +V+  DYLRPE  F  +E     M  D  +AR+IL
Sbjct: 254 EVPN----LETFLFDFSGDLYGAHLSVALADYLRPEEVFDSLEAFIAQMDADCARAREIL 309

Query: 310 ESS 312
           E+S
Sbjct: 310 EAS 312


>gi|209886344|ref|YP_002290201.1| riboflavin biosynthesis protein RibF [Oligotropha carboxidovorans
           OM5]
 gi|209874540|gb|ACI94336.1| riboflavin biosynthesis protein RibF [Oligotropha carboxidovorans
           OM5]
          Length = 327

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 173/314 (55%), Gaps = 8/314 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            +  +   N  +P   +G  +A+GNFDG+HLGH  ++E A+ +A ++  P   L+F PHP
Sbjct: 7   QIIRDTTPNADIP---RGATIALGNFDGVHLGHRTVIEAALTMAKSAHQPAFALTFEPHP 63

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R+  +  +P F L+  + + ++L   G    I   F    A   A++FI   L+E L V 
Sbjct: 64  RSFFKPDAPPFRLTDETTKLRLLAGTGLDGAIVLTFDAARAATPAQEFINHELIERLGVS 123

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FGK R G    L + G + G   V +          +SSS IR AL +G V
Sbjct: 124 GISIGDDFHFGKGRGGTPATLVEWGRQRGI-PVHVQTHVGLADMPISSSAIRAALAEGRV 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF-RTQDQTSY 238
            +A  +LG  + +   VIHG K GR LG+PTAN++L+P + L+ G+YA+R  R   +   
Sbjct: 183 RDATAMLGSPWFVNGTVIHGAKRGRDLGYPTANIRLAPHVDLQHGIYAVRVGRGGGRELL 242

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA++GR PT   NG  LLE F+FDF+  +Y +   V+F +YLRPE KF D+  L   M
Sbjct: 243 GGVASYGRRPTF-DNGDALLEVFLFDFAGSLYDEVLDVAFIEYLRPERKFDDLAALVRQM 301

Query: 299 GEDEKKARKILESS 312
            +D  +AR +L ++
Sbjct: 302 DDDSIRARAVLRAA 315


>gi|115523431|ref|YP_780342.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisA53]
 gi|115517378|gb|ABJ05362.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris BisA53]
          Length = 327

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 163/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G VVA+GNFDG+H GH  ++   +++A  +  P   ++F PHPR     + P F L+  
Sbjct: 23  RGAVVAMGNFDGVHRGHRAVINACLEMARIHKQPAFAVTFEPHPRAFFNPAKPEFWLTDV 82

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L   G   ++   F    A   AE FI+  L   L V  V  G  F FGK R G
Sbjct: 83  EGKMRLLAGAGLDGVVLLSFDATRAGTPAEDFIRNELHRRLGVSGVAVGYDFHFGKGRGG 142

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L     K G   V +    +     VSSS IR AL++G + +A H+L   + +  +
Sbjct: 143 SPSLLASEAPKLGIE-VDVQPHIDFGDHPVSSSAIRIALSEGRIKDATHMLTAPWFVSGE 201

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG K GR LG+PTAN++L P+  LK+G+YA+R     Q     VANFGR PT   NG 
Sbjct: 202 VIHGAKRGRELGYPTANIRLDPNCGLKQGIYAVRVGLGGQ-KIDAVANFGRRPTF-DNGA 259

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            LLE F+FDF  ++YGQ+  V+F D++R E KF  +E+L   M +D  +A+  L ++
Sbjct: 260 PLLEVFLFDFQGDLYGQKLDVAFIDFIRAEAKFASVEELIAQMNDDSIRAKTALAAA 316


>gi|310815421|ref|YP_003963385.1| riboflavin biosynthesis protein RibF [Ketogulonicigenium vulgare
           Y25]
 gi|308754156|gb|ADO42085.1| riboflavin biosynthesis protein RibF [Ketogulonicigenium vulgare
           Y25]
          Length = 312

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/294 (40%), Positives = 165/294 (56%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIGNFDG+H GH  +++ A +IA   N+P+ VL+F PHPR       P F L   + +
Sbjct: 18  VIAIGNFDGVHAGHAAVIDHARQIAQQMNAPLGVLTFEPHPRQFFIPDGPTFRLMDAATR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   L    F    A  SAE FIQK+L E L VK V+ G  F FGK R+G+  
Sbjct: 78  AEQLRESGVQRLYELPFNSALAELSAEDFIQKILHERLGVKHVVVGQDFHFGKGRSGNAA 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L + GE  GF  V +  L     + VSS+ IRTAL +G   +AA +LG+   IE  V H
Sbjct: 138 MLAEMGEHLGF-GVTVAPLIALTGKEVSSTAIRTALAEGRPRDAAAMLGHVHRIEGIVEH 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNGP 255
           G++ GR LGFPTAN+ ++   + + GVYA     +D      Y G  + G  PT   N P
Sbjct: 197 GDQRGRELGFPTANIGINGLHMPRFGVYATTVIVRDGPYAGQYLGATSIGSRPTFGVNKP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              E+++ DF  ++YG R +V   DYLRPE+KF  I+ L   M  D  +AR+IL
Sbjct: 257 -NCETYLLDFRGDLYGARISVGLVDYLRPELKFDSIDALITQMHADVIEARRIL 309


>gi|110680684|ref|YP_683691.1| riboflavin biosynthesis protein RibF [Roseobacter denitrificans OCh
           114]
 gi|109456800|gb|ABG33005.1| riboflavin biosynthesis protein RibF [Roseobacter denitrificans OCh
           114]
          Length = 310

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 165/301 (54%), Gaps = 6/301 (1%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P H +G   AIGNFDG+HLGH  +++ A  +A ++P+ +L+F PHPR      +P F L 
Sbjct: 12  PEH-RGASAAIGNFDGVHLGHQSVIDLARSVAPDAPLGILTFEPHPRAFFAPDAPPFRLM 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +   LEK+G   L    F    A+ + E F  +V+ E   +K VI G  F FGK R
Sbjct: 71  SREARASRLEKLGVDILYEVNFNAALASLTPEDFAVRVIHEGFGLKHVIVGADFCFGKGR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G    L++ G+  GF  V +  L       VSS+ IR+AL+ G    AA +LG+   IE
Sbjct: 131 SGTADDLRRFGQTMGF-DVTVAPLMARSDITVSSTAIRSALSAGKPREAAEMLGHWHRIE 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---SYSGVANFGRNPTM 250
             VI GE+ GR LG+PTANM +        GVYA+     D     SY GVA+ G  P  
Sbjct: 190 GPVIGGEQRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLDGAHAGSYHGVASMGVRPMF 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             N P  LE+FIFDFS ++YG   +V+  ++LRPE+KF  ++ L   M +D   AR IL+
Sbjct: 250 GENRP-NLETFIFDFSGDLYGTPLSVALVEHLRPELKFDGLDALIAQMDQDSTAARTILD 308

Query: 311 S 311
           +
Sbjct: 309 A 309


>gi|87201272|ref|YP_498529.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136953|gb|ABD27695.1| FMN adenylyltransferase [Novosphingobium aromaticivorans DSM 12444]
          Length = 307

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 166/301 (55%), Gaps = 4/301 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
           + +P+ L+G +VA+GNFDG HLGH  ++ +AI+ A     P+ V +F+PHP       +P
Sbjct: 8   KPVPDSLRGAIVALGNFDGFHLGHQAVVGEAIRWARAEGRPVVVATFDPHPVRYFAPDAP 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L+    ++++    G  A++   F  E A  SA  +I++ LV  L    V+TG  F 
Sbjct: 68  PFRLTTLDQRQELFAAAGADAMLVIHFGAEVAGMSALAWIEQGLVGHLGAVGVVTGEDFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R+G+  +L + G ++G     +  +   + ++VSSS IR AL  G    AA LL  
Sbjct: 128 FGKGRSGNAQVLSQEGPRFGLVARAVGPV-TLEGEVVSSSRIRDALKAGDCETAARLLTR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F I   V HG+K+GRT+ FPTAN+ +   +  + G+YA+  R  D     G AN G  P
Sbjct: 187 PFAIRGAVQHGDKLGRTINFPTANLDIGNYLRPRYGIYAVTGRLPDGRVVKGAANIGIRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T  P    LLE   FDFS ++YGQ   V+F  +LRPE KF  ++ L   M  D  +AR++
Sbjct: 247 TFDPPKE-LLEPHFFDFSGDLYGQEIEVAFHHFLRPEAKFDGLDALVAQMERDCDEARRL 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|326386296|ref|ZP_08207920.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209521|gb|EGD60314.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 308

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 4/306 (1%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS 65
           +    LP+  +G ++A+GNFDG HLGH  +   A++ A     P  + +F+PHP    Q 
Sbjct: 4   DARHPLPDAFRGAIIALGNFDGFHLGHQAVAGAAVEWARAEGRPAIIATFDPHPVRHFQP 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +  F L+    +E++    G  A++ + F  + AN +A +F+  +LV  L    V+TG 
Sbjct: 64  DTAPFRLTTLDQREELFLAAGADAMLIFHFDHDLANTTAAEFVCDLLVGRLGAAGVVTGD 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FGK R G+ G+L + G + G  T  +  +     ++VSSS IR AL +G  + A  L
Sbjct: 124 DFTFGKGRGGNVGVLTELGRELGLRTRQVGPVLVG-GEVVSSSRIREALEEGDCVTAGRL 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           +   + I   V HG+K+GRT+GFPTAN+ +   +  + G+YA+  R  D T   G AN G
Sbjct: 183 MTRPYAIRGIVQHGDKVGRTIGFPTANLVIRNYLRPRYGIYAVTGRLADGTRLKGAANMG 242

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT  P    LLE   FDFS ++YGQ   V+F  +LR E KF  ++ + + +G+D ++A
Sbjct: 243 VRPTFNPPKE-LLEPHFFDFSGDLYGQEIEVAFHYFLRGEWKFDSLDAMMVQIGKDCEEA 301

Query: 306 RKILES 311
           R++LE 
Sbjct: 302 RRLLEG 307


>gi|254510038|ref|ZP_05122105.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           KLH11]
 gi|221533749|gb|EEE36737.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           KLH11]
          Length = 310

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 164/298 (55%), Gaps = 11/298 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+HLGH  +++ A   A ++P+ VL+F PHPR      +P F L   + 
Sbjct: 15  RGASVAIGNFDGVHLGHQSVIDLAHTAAPDAPLGVLTFEPHPREYFAPDAPPFRLMRGNA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L+K+G   L    F    A  + E F + V+ E L +  ++ G  F FGK R G  
Sbjct: 75  RAHRLQKLGVEKLYELPFNAALAGLTPEAFARNVICEGLGLSHIVVGADFCFGKGRKGTP 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L + G + GF  V I  L      +VSS+ IR AL++G   +AA +LG+   IE +V+
Sbjct: 135 QDLIRFGAEMGF-GVTIAPLMERSENVVSSTAIRNALSEGRPRDAAAMLGHWHRIEGEVV 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM---V 251
            GE+ GR LGFPTANM +      + GVYA+     D   Q SY G A+ G  P     V
Sbjct: 194 GGEQRGRELGFPTANMSIEGLHPPRFGVYAVLVDVLDGPHQGSYLGAASVGTRPMFHGEV 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           PN    +E+F+FDFS ++YG   +V   DYLRPE+ F  +++L   M  D  +ARKIL
Sbjct: 254 PN----IETFLFDFSGDLYGATLSVGLIDYLRPEMTFSRLDELTAQMDADCAQARKIL 307


>gi|254559107|ref|YP_003066202.1| riboflavin biosynthesis protein ribF [Methylobacterium extorquens
           DM4]
 gi|254266385|emb|CAX22149.1| putative riboflavin biosynthesis protein ribF [Includes: Riboflavin
           kinase (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Methylobacterium
           extorquens DM4]
          Length = 337

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 151/287 (52%), Gaps = 3/287 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFSPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT     P LLE  +FD
Sbjct: 225 TLGYPTANLALE-SCGLAHGIYAVRVRLADGSLHDGVASYGRRPTFDDGAP-LLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +
Sbjct: 283 FKGDLYGQEVAVELLGYLRGEEKFSSAEALIAQMDVDSARAKAAIRT 329


>gi|325577253|ref|ZP_08147737.1| riboflavin biosynthesis protein RibF [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160835|gb|EGC72956.1| riboflavin biosynthesis protein RibF [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 308

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 168/301 (55%), Gaps = 16/301 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P +L G  + IGNFDG+HLGH  IL    + AN  N P+ V+ F P PR           
Sbjct: 11  PPYLSGCALTIGNFDGVHLGHQAILRHLRQKANALNLPMAVMLFEPQPREYFMGDKAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L     +   L + G   +I  KF    AN  AEQFI+  LV  L VK +  G  F+FG 
Sbjct: 71  LMRLRDKLHYLAQAGVDVVIVAKFDRTFANLPAEQFIEDWLVRKLNVKFLSIGDDFKFGA 130

Query: 132 DRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            R G+  +LQ+ G+++GF      T  +DELR      +SS+ IR AL K  + +A +LL
Sbjct: 131 KRLGNFAMLQQAGKRFGFEVEDSRTFCLDELR------ISSTAIREALAKDDLQHAQNLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+
Sbjct: 185 GKPYRILGRVIHGNKLGRTIGFPTANVRLHRQVNPVKGVYAVKVRLKSGEIFNGVANMGK 244

Query: 247 NPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG + LLE  +FDFS+ IYGQ   V F   +R EIKF   E LK  + +D K A
Sbjct: 245 RPTI--NGTIQLLEVHLFDFSENIYGQMVEVEFCQKIRDEIKFPSFEALKAQIEQDVKTA 302

Query: 306 R 306
           +
Sbjct: 303 K 303


>gi|218528501|ref|YP_002419317.1| riboflavin biosynthesis protein RibF [Methylobacterium
           chloromethanicum CM4]
 gi|218520804|gb|ACK81389.1| riboflavin biosynthesis protein RibF [Methylobacterium
           chloromethanicum CM4]
          Length = 337

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 151/287 (52%), Gaps = 3/287 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT     P LLE  +FD
Sbjct: 225 TLGYPTANLALE-SCGLAHGIYAVRVRLADGSLHDGVASYGRRPTFDDGAP-LLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRT 329


>gi|114327131|ref|YP_744288.1| FMN adenylyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315305|gb|ABI61365.1| riboflavin kinase [Granulibacter bethesdensis CGDNIH1]
          Length = 325

 Score =  202 bits (513), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 160/298 (53%), Gaps = 1/298 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           +P   +G  VA+GNFDG+HLGH  ++  A      +P+  L+F PHPR   +   P F L
Sbjct: 22  IPPEARGASVALGNFDGVHLGHEAVIRAAHAARPTAPLMALTFEPHPREFFRPYDPPFRL 81

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +  + +   L ++G + ++   F    +   AE+FI  VL+  L+ K +  G  F FG  
Sbjct: 82  TLSAERADALARLGVTWVVELAFDEAFSLMEAEEFISGVLLAGLDAKHLACGADFAFGHR 141

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD  +L  R E  G     +  + + +  + SS+ IR  L  G+   AA LLG  + I
Sbjct: 142 RGGDITLLSTRSEALGIGLTIVPPVMDAEGPL-SSTRIRRLLQDGYPERAAQLLGRPWGI 200

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V HG+K GRT+GFPTAN+     +    GVYA+  R  D T Y GVAN GR PT+  
Sbjct: 201 RGIVSHGDKRGRTIGFPTANIPFGRHLEPARGVYAVTARLPDGTEYPGVANIGRRPTVNE 260

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                LE+ +FDFS ++Y Q  TVS   +LR E KF  ++ L+  + +D  +ARK+L+
Sbjct: 261 GPESRLEAHLFDFSGDLYDQDITVSLHAFLRAERKFAGLDDLRGQIAQDATEARKLLD 318


>gi|90422910|ref|YP_531280.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisB18]
 gi|90104924|gb|ABD86961.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris BisB18]
          Length = 323

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/289 (38%), Positives = 158/289 (54%), Gaps = 5/289 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VVA+GNFDG+HLGH  ++   +++A  +  P   ++F PHPR+      P F L+  
Sbjct: 19  KGAVVAMGNFDGVHLGHRAVIGACLEMAKKHRKPALAVTFEPHPRSFFSPEKPQFPLTDV 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G    +   F    A  SA+ FI+  L   L +  +  G  F FGK R G
Sbjct: 79  TAKLRLLAGAGLDGAVVLSFDAARAATSAQDFIRDELHGRLGITGIAVGYNFHFGKGRGG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L     K G   V +    +     VSSS IR ALT+G + +A  +LG  + +  +
Sbjct: 139 SPSLLASEAPKLGIE-VDVQPHVDVGEHPVSSSAIRQALTEGRIFDATTMLGAPWFVTGE 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+K GR LG+PTAN++L P   LK+G+YA+R     +     VANFGR PT   NG 
Sbjct: 198 VVHGDKRGRLLGYPTANIRLDPHCGLKQGIYAVRVGMNGR-HLDAVANFGRRPTF-DNGA 255

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            LLE F+FDF  ++YG +  V+F D++RPE KF   E L   M +D  K
Sbjct: 256 PLLEVFVFDFQGDLYGAKLDVAFIDFIRPEAKFDSAEALIRQMDDDSLK 304


>gi|326334501|ref|ZP_08200712.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325693270|gb|EGD35198.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 307

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 176/294 (59%), Gaps = 7/294 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   + IG FDGIH+GH  I+ Q +  A    +  TVL+F PHPR ++  S+PI  +   
Sbjct: 14  KESALTIGTFDGIHIGHQRIIAQVVDTARQRHLIPTVLTFFPHPRMVLNPSAPIALIQTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LEK G   L+   F  E A+ +AE ++++VLV+ L+ K +I G   RFGK+R+ 
Sbjct: 74  EERANLLEKYGIEQLVIQPFDKEFASLTAEDYVKEVLVKKLKAKVIIIGYDHRFGKNRSA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  GE+Y F  + I  ++   S  VSS+ IR+AL +G++  A H LGY F++   
Sbjct: 134 GIEELKAFGEQYHFEVIEIP-VQEVDSLSVSSTKIRSALNQGNIKQATHYLGYPFSLSGK 192

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG+KIGRTLG+PTAN+Q++    ++ K GVYA+    + +  Y G+ + G+NPT+   
Sbjct: 193 VVHGQKIGRTLGYPTANIQVANTHKLIPKIGVYAVYSIIEGKKIY-GMLSIGKNPTIEGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           G   +E + FDF +++YG+   V F  +LR E+KF  +E LK  +  DE  AR+
Sbjct: 252 GE-SIEVYFFDFDKDLYGKEIRVYFVAFLREEVKFHSLEALKTQLKMDENIARQ 304


>gi|163732286|ref|ZP_02139732.1| riboflavin biosynthesis protein RibF [Roseobacter litoralis Och
           149]
 gi|161394584|gb|EDQ18907.1| riboflavin biosynthesis protein RibF [Roseobacter litoralis Och
           149]
          Length = 310

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/299 (39%), Positives = 163/299 (54%), Gaps = 6/299 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P H +G   AIGNFDG+HLGH  +++ A  +A ++P+ +L+F PHPR      +P F L 
Sbjct: 12  PEH-RGASAAIGNFDGVHLGHQSVIDLARSVAPDAPLGILTFEPHPRAFFAPDAPPFRLM 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +   L+K+G   L    F    A+ + E F  +V+ E   +K VI G  F FGK R
Sbjct: 71  SREARASRLDKLGVDILYEVNFNAALASLTPEDFAARVIHEGFGLKHVIVGADFCFGKGR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G    L++ G+  GF  V +  L       VSS+ IR+AL+ G    AA +LG+   IE
Sbjct: 131 SGTADDLKRFGQTMGF-DVTVAPLMARSDITVSSTAIRSALSAGKPREAAEMLGHWHRIE 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---SYSGVANFGRNPTM 250
             VI GE+ GR LG+PTANM +        GVYA+     D     SY GVA+ G  P  
Sbjct: 190 GPVIGGEQRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLDGAHAGSYHGVASMGVRPMF 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             N P  LE+FIFDFS ++YG   +V+  ++LRPE+KF  ++ L   M +D   AR IL
Sbjct: 250 GENRP-NLETFIFDFSGDLYGTPLSVALVEHLRPELKFDGLDALIAQMDQDSTAARTIL 307


>gi|163849870|ref|YP_001637913.1| riboflavin biosynthesis protein RibF [Methylobacterium extorquens
           PA1]
 gi|163661475|gb|ABY28842.1| riboflavin biosynthesis protein RibF [Methylobacterium extorquens
           PA1]
          Length = 355

 Score =  201 bits (512), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 151/287 (52%), Gaps = 3/287 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 63  NFDGVHRGHRTLIEAVRTEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 122

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 123 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 182

Query: 146 KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 183 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 242

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT     P LLE  +FD
Sbjct: 243 TLGYPTANLALE-SCGLAHGIYAVRVRLADGSLHDGVASYGRRPTFDDGAP-LLEVHLFD 300

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +
Sbjct: 301 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRT 347


>gi|260432847|ref|ZP_05786818.1| riboflavin biosynthesis protein RibF [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416675|gb|EEX09934.1| riboflavin biosynthesis protein RibF [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 310

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/301 (38%), Positives = 165/301 (54%), Gaps = 11/301 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G   AIGNFDG+H+GH  +++ A K   ++P+ VL+F PHPR      +P F L   + 
Sbjct: 15  RGASAAIGNFDGVHIGHQSVIDLARKACPDAPLGVLTFEPHPREYFAPDAPPFRLMRGNA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L    F    A  + E+F + V+ + L +  V+ G  F FGK R+G  
Sbjct: 75  RAHRLEKLGVQKLYELPFNAALAGLTPEEFARNVICQGLGLAHVVIGADFCFGKGRSGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             + + G + GF  V I  L      +VSS+ IR AL+ G   +AA +LG+   IE +VI
Sbjct: 135 QDMVRFGRQMGF-GVTIAPLMQQSDHVVSSTAIRQALSDGRPRDAAAMLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM---V 251
            GE+ GR LGFPTANM +      K GVYA+     D     SY G A+ G  P     V
Sbjct: 194 GGEQRGRELGFPTANMSIEGIHPPKFGVYAVLVDVLDGPHAGSYHGAASVGVRPMFHGEV 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           PN    +E+F+FDFS ++YG   +V   ++LRPE+ F  ++ L   M ED  +ARKIL +
Sbjct: 254 PN----IETFLFDFSGDLYGATLSVGLVEFLRPEMTFDGLDALIAQMTEDCDRARKILAA 309

Query: 312 S 312
           +
Sbjct: 310 T 310


>gi|159045467|ref|YP_001534261.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
 gi|157913227|gb|ABV94660.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
          Length = 317

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIGNFDG+HLGH  IL +  +IA   ++P+ V++F PHPR      +P F L   
Sbjct: 16  RGACAAIGNFDGVHLGHQSILTRTREIAQTLDAPVGVMTFEPHPREYFAPEAPPFRLMSE 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +   LEK+    L +  F    A  +   F Q +LV+ L ++ VI G  F FGK R G
Sbjct: 76  TAKAHRLEKLDVDILYQLPFDASLAGLTPRDFAQCILVDALGLRHVIVGADFCFGKGRKG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  G + GF     D L++N S +VSS++IRTAL +G   +AA +LG+   I+  
Sbjct: 136 TAENLRSFGAEMGFGVTIADLLQDN-SLVVSSTSIRTALAEGRPEDAARMLGHWHRIDGP 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM-- 250
           V HGEK GRTLG+PTANM ++     K GVYA+     D      Y G A+ G  P    
Sbjct: 195 VEHGEKRGRTLGYPTANMSIAGLHPPKFGVYAVLVDVLDGPHAGHYHGAASMGVRPMFGG 254

Query: 251 -VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            VPN    +E+F+FDF  ++YG + +V+   +LRPE  F  ++ L   M  D  KAR IL
Sbjct: 255 AVPN----IETFLFDFKGDLYGAQLSVALVSFLRPEANFDGLDALIAQMDADCAKARDIL 310


>gi|56697986|ref|YP_168357.1| riboflavin biosynthesis protein RibF [Ruegeria pomeroyi DSS-3]
 gi|56679723|gb|AAV96389.1| riboflavin biosynthesis protein RibF [Ruegeria pomeroyi DSS-3]
          Length = 310

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/297 (38%), Positives = 166/297 (55%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+H+GH  ++E A + A + P+ V++F PHPR      SP F L     
Sbjct: 15  RGASVAIGNFDGVHIGHRSVIELARQAAPDVPLGVMTFEPHPREYFAPDSPPFRLMRGPA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L    F    A  + E F + V+ + L +K V+ G  F FGK R+G+ 
Sbjct: 75  RAHRLEKLGVERLYELPFNAALAGLTPEGFARGVICDGLGLKHVVIGADFCFGKGRSGNA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             + + G++ GF  V I  L     +++SS+ IRTAL++G   +AA +LG+   IE +VI
Sbjct: 135 ADMVRFGQQMGF-GVTIAPLLEQTERVISSTAIRTALSEGRPRDAAAMLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GR LGFPTANM +      + GVYA+     D   + SY G A+ G  P      
Sbjct: 194 GGEQRGRELGFPTANMSIDGLHPPRFGVYAVLVDVLDGPHKGSYHGAASVGVRPMFNGER 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E+F+FDFS ++YG   +V   +YLRPE+ F  ++ L   M  D  +AR IL +
Sbjct: 254 P-NIETFLFDFSGDLYGATLSVGLVEYLRPEMTFDGLDALIAQMDADCARARDILAA 309


>gi|78222600|ref|YP_384347.1| riboflavin kinase/FMN adenylyltransferase [Geobacter
           metallireducens GS-15]
 gi|78193855|gb|ABB31622.1| riboflavin kinase / FMN adenylyltransferase [Geobacter
           metallireducens GS-15]
          Length = 322

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 181/314 (57%), Gaps = 14/314 (4%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGHHLILE----QAIKIANNSPITVLSF 55
           MH+F +IE I + LPN     VV IGNFDG+HLGH  I      +A  I   S   V++F
Sbjct: 1   MHIFRSIEEIAEKLPN----AVVTIGNFDGVHLGHREIFRRVKREAAAIGGVS--LVITF 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
            PHP  ++        +S  + +E +LE  G   L+   FT E A+ SAE+F++ +LV  
Sbjct: 55  IPHPIKMLGVKKGFRLISTYAEKETLLEASGIDYLLIIPFTGEFASISAERFVRDILVGT 114

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           + V+ +I G  + FGK+R GD  +L++ GE+ GF TV + E   +   + SS+ +R  + 
Sbjct: 115 IGVRKLIIGYDYAFGKNRQGDVTMLRRMGEELGF-TVDMLEPITSGDLVYSSTAVRQMVA 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           +G V     LLG  F++   V+HG + G+ LGFPTAN+Q   +++ K GVYA++ + + +
Sbjct: 174 EGDVRGVVRLLGRHFSVGGTVVHGRQRGKGLGFPTANLQTDKELIPKPGVYAVKVKVE-E 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T+Y G  N G NPT   NG L +E FIFDF  +IYG+   + F D +R E+ F + + L+
Sbjct: 233 TTYDGACNIGDNPTF-GNGSLSIEVFIFDFDGDIYGREVRLYFVDRIRDEVTFPNPQVLQ 291

Query: 296 IYMGEDEKKARKIL 309
             +  D  + R++L
Sbjct: 292 EAIARDVARCRELL 305


>gi|240137095|ref|YP_002961564.1| putative riboflavin biosynthesis protein ribF [Methylobacterium
           extorquens AM1]
 gi|240007061|gb|ACS38287.1| putative riboflavin biosynthesis protein ribF [Methylobacterium
           extorquens AM1]
          Length = 337

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 151/287 (52%), Gaps = 3/287 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  + + + GVA++GR PT     P LLE  +FD
Sbjct: 225 TLGYPTANLALE-SCGLAHGIYAVRVRLANGSLHDGVASYGRRPTFDDGAP-LLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRT 329


>gi|329890604|ref|ZP_08268947.1| riboflavin biosynthesis protein RibF [Brevundimonas diminuta ATCC
           11568]
 gi|328845905|gb|EGF95469.1| riboflavin biosynthesis protein RibF [Brevundimonas diminuta ATCC
           11568]
          Length = 309

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 153/288 (53%), Gaps = 3/288 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + L +  KG  VA+G FDG+H GH  ++  A + A+    P+ V+SF+PHPR + Q  + 
Sbjct: 9   RGLTDAQKGAAVAVGAFDGVHRGHQAVIASAREAADRLGVPLAVVSFDPHPRRLFQPEAA 68

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L  P    + L  +G   L    F  E A  S E+F ++VL E L ++    G  F 
Sbjct: 69  PFRLMTPDQMARALAPLGVDRLYLLPFDREMAGMSDEEFARRVLSEGLGIRHAAVGFDFT 128

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R+G   +LQ  GE  GF     D + +     +SSS +R AL  G +  AA +LG 
Sbjct: 129 FGKGRSGSPALLQAYGETLGFTVSVTDRIDDASGLKLSSSAVREALKAGDMDRAAAILGR 188

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F I+ +VIHG+K GRT+G PTAN+ +   +    GVYA R R  D     GVAN G  P
Sbjct: 189 PFAIQGEVIHGDKRGRTIGVPTANIAMGDYMRPAYGVYATRTRLPDGRVVKGVANLGVRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                 P LLE ++ DF + +YGQ        +LR E+KF D++ LK+
Sbjct: 249 MFEIEEP-LLEVWLLDFDESLYGQVLETELVAFLRGEMKFDDLDALKV 295


>gi|163794896|ref|ZP_02188865.1| Riboflavin kinase / FAD synthetase [alpha proteobacterium BAL199]
 gi|159179715|gb|EDP64242.1| Riboflavin kinase / FAD synthetase [alpha proteobacterium BAL199]
          Length = 313

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 170/302 (56%), Gaps = 8/302 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFT 71
           P H +G V AIGNFDG+HLGH  ++ +A +IA +  +P+ VL+F PHPR   Q  +  F 
Sbjct: 12  PQH-RGAVAAIGNFDGVHLGHRAVIGEAARIAGDLHAPLAVLTFEPHPRRFFQPDAAAFR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +   LE++G   L    F    A+ +AE F+  +L + L ++ V+ G  F FG 
Sbjct: 71  LTTSQGRASRLEELGVDVLFELPFDDAFAHVAAESFVDDILYDTLGLRHVVVGYDFNFGH 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R G   +L +R    GF    +  +  +   + SSS IR  L +G    AA LLG  + 
Sbjct: 131 RRRGTPDMLIERAGHLGFGATRVSAVHESDGAVYSSSRIRQCLAEGDPRGAASLLGSPWE 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD----QTSYSGVANFGRN 247
           I+  V  G++ GRT+GFPTAN++L   I  K GVYA+R    D     T  +GVAN G  
Sbjct: 191 IDGIVEEGDRRGRTIGFPTANLRLGSLICPKLGVYAVRAVLADGEGAGTWMTGVANLGVR 250

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+   G +LLE+ +FD S E+YG+R  V   D++RPE KF  +++LK  +  D  +AR+
Sbjct: 251 PTVNDRG-VLLETHLFDRSIELYGRRLRVRLVDFIRPERKFGGLDELKAQIAADAARARE 309

Query: 308 IL 309
           +L
Sbjct: 310 ML 311


>gi|84499761|ref|ZP_00998049.1| riboflavin biosynthesis protein RibF [Oceanicola batsensis
           HTCC2597]
 gi|84392905|gb|EAQ05116.1| riboflavin biosynthesis protein RibF [Oceanicola batsensis
           HTCC2597]
          Length = 312

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/302 (37%), Positives = 170/302 (56%), Gaps = 13/302 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+H+GH  +++ A   A   ++P+ V++F PHPR +    +P F L+ P
Sbjct: 15  RGAAVAIGNFDGVHIGHRAVIDLARAEARRLHAPLGVMTFEPHPRQLFAPDAPPFRLTGP 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +   LEK+G   L    F    A  + E F+++VLVE L V+ V+ G  F FG  RAG
Sbjct: 75  AARAHRLEKIGVEILYELNFNPALAGLTPEAFVRRVLVEGLGVRHVVVGADFHFGAKRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  G++ GF  V + +L    ++ VSS+ IR AL +G   +AA +LG+   IE  
Sbjct: 135 TTETLRAFGQELGF-GVTVADLVAEGTEEVSSTAIRDALAEGRPRDAAAMLGHWHRIEGP 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTM-- 250
           VI G++ GR LG+PTANM ++     + GVYA+         + +Y G A+ G  P    
Sbjct: 194 VIRGDQRGRDLGYPTANMSIAGLHRPRFGVYAVLVDVLTGPHRGTYRGAASLGMRPQFGG 253

Query: 251 -VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             PN    LE+++FDF  ++YG+  +V   +YLRPE KF  ++ L   M  D  +AR IL
Sbjct: 254 ETPN----LETYLFDFQGDLYGETVSVGLVEYLRPEAKFDSLDGLIRQMEADCDRARAIL 309

Query: 310 ES 311
            +
Sbjct: 310 AA 311


>gi|126739861|ref|ZP_01755552.1| riboflavin biosynthesis protein RibF [Roseobacter sp. SK209-2-6]
 gi|126719093|gb|EBA15804.1| riboflavin biosynthesis protein RibF [Roseobacter sp. SK209-2-6]
          Length = 315

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 161/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+H GH  +++ A   A  +P+ V++F PHPR      +P F L  P  
Sbjct: 15  RGASVAIGNFDGVHRGHQSVIDLARAAAPQAPLGVMTFEPHPREFFAPDAPPFRLMSPEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    +    E F +KV+ E L ++ V+ G  F FGK R+G  
Sbjct: 75  RASRLEKLGVDRLYQLNFNSALSGLPPEDFARKVISEGLGLRHVVVGADFCFGKGRSGSA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ G + GF  V I  L  +    VSS+ IRTAL++G    AA +L +   +E +VI
Sbjct: 135 EDLQRFGAEMGF-GVTIAPLMAHSENTVSSTAIRTALSEGRPREAAAMLSHWHRLEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GR LGFPTANM +        GVYA+     D   + SY G A+ G  P      
Sbjct: 194 GGEQRGRELGFPTANMSIDGLHPPAFGVYAVLVDVLDGPHKGSYQGAASVGVRPMFDGEH 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E+F+FDF+  +YG   +V+  +YLRPE+KF  +E L   M  D   AR IL +
Sbjct: 254 P-NIETFLFDFTGNLYGATLSVALVEYLRPEMKFDGLEALIAQMTADCDSARDILAA 309


>gi|288957464|ref|YP_003447805.1| FMN adenylyltransferase [Azospirillum sp. B510]
 gi|288909772|dbj|BAI71261.1| FMN adenylyltransferase [Azospirillum sp. B510]
          Length = 313

 Score =  199 bits (506), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 8/307 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
            LP   +G VVA+GNFDG+H GH  ++  A ++A   + P  V++F PHPR++ +   P 
Sbjct: 9   DLPAEERGAVVALGNFDGVHRGHQAVIGTAQRLAAEMSVPSAVVTFEPHPRSVFRPDDPP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           F L+P  ++ + +E +G   LI   F     + +A+ F+ +VLV  L V+ V+ G  F F
Sbjct: 69  FRLTPFRVKTRHIEALGVDQLIVCHFDDGFRHKTAQAFVDEVLVGGLGVRHVVCGYDFLF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R+GD   LQ  G   GF    +  + + +  + SS+ +R ALT G    AAH+LG+ 
Sbjct: 129 GHRRSGDPAFLQAAGHAQGFGVTEVGPVSDEQGGVYSSTRVRDALTAGRPREAAHVLGHP 188

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGR 246
           + IE  V+HG++ GRT+GFPTAN++L   +    GVYAIR    R  +     GVAN G 
Sbjct: 189 WEIEGRVVHGDQRGRTIGFPTANIELGEYLRPAFGVYAIRAGVDRGGETVWLPGVANLGA 248

Query: 247 NPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  +G +  LE+ +FD   ++Y     V   D+LRPE+KF     LK  + +D   A
Sbjct: 249 RPTV--DGTVARLEAHLFDVDLDLYDLHLRVRMIDFLRPEMKFPSFAALKDQIVQDAAAA 306

Query: 306 RKILESS 312
           R +L + 
Sbjct: 307 RAMLTAG 313


>gi|309389236|gb|ADO77116.1| riboflavin biosynthesis protein RibF [Halanaerobium praevalens DSM
           2228]
          Length = 307

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 16/297 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG FDG+H GH LI+++AIKIA  NN P  VLSF+PHP  II   +P     PP++ 
Sbjct: 18  CLAIGAFDGLHKGHQLIIKRAIKIARKNNYPAAVLSFHPHPLKIIAGKNP-----PPAVV 72

Query: 79  EK-----ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            +     +LE+MG       +F  E A+  AE FI  +L++ ++V T++ G  FRF    
Sbjct: 73  SRHQKISLLEEMGVDYYFEQEFNQEFAHLRAEDFINNILIDKIKVNTIVVGDDFRFAYKN 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  IL++ G+ + F    I +L  +  +I SS+ IR  L  G +  A  LLG  + I 
Sbjct: 133 EGNVDILREMGKIHNFKAEIISQLHASDDRI-SSTRIRNLLKAGELKQAKKLLGRPYQIC 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            +VIHG+K GR +GFPTAN++L  +  L  EGVYA++    DQ  Y G AN G NPT   
Sbjct: 192 GEVIHGKKRGRKMGFPTANLKLETNYALPPEGVYAVKVNI-DQQEYIGAANLGYNPTF-N 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N  +  E ++ DF ++IYG+R  V   +++R E +FK  E+L   M +D    R++L
Sbjct: 250 NQEISFEVYLLDFKKDIYGKRLCVDLIEFIRGERQFKSKEELIEQMQQDILYTRQLL 306


>gi|114767094|ref|ZP_01445977.1| riboflavin biosynthesis protein RibF [Pelagibaca bermudensis
           HTCC2601]
 gi|114540747|gb|EAU43813.1| riboflavin biosynthesis protein RibF [Roseovarius sp. HTCC2601]
          Length = 310

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 161/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+H GH  ++  A     ++P+ VL+F PHPR      SP F L     
Sbjct: 15  RGASVAIGNFDGVHRGHQAVIGLARAAGGDAPLGVLTFEPHPREYFAPESPPFRLMSAKA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L    F    A  + E+F +KV+ + L +K V+ G  F FG  RAG  
Sbjct: 75  RASRLEKLGIERLYEINFNAALAALTPEEFARKVIKDGLGLKHVVVGADFCFGNKRAGTV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++ GE+ GF  V + E+  ++   VSS+ IR ALT G   +AA  LG+   IE  VI
Sbjct: 135 EDLRRFGEEMGF-GVTVAEILEHEGGQVSSTAIREALTDGRPRDAAAQLGHWHRIEGTVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTSYSGVANFGRNPTMVPNG 254
            GE+ GR LG+PT NM +      K GVYA+       + +  Y G A+ G  P    N 
Sbjct: 194 GGEQRGRELGYPTTNMSIDGLHPPKLGVYAVLVEVLTGEHKGHYHGAASIGVRPMFGENR 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  LE+FIFDF  ++YG   ++   +YLRPE+KF  +E L   M  D  +AR ILE+
Sbjct: 254 P-NLETFIFDFKGDLYGATLSIGLVEYLRPELKFDSLEALIEQMDADCARARDILEA 309


>gi|255263613|ref|ZP_05342955.1| riboflavin biosynthesis protein RibF [Thalassiobium sp. R2A62]
 gi|255105948|gb|EET48622.1| riboflavin biosynthesis protein RibF [Thalassiobium sp. R2A62]
          Length = 314

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 165/305 (54%), Gaps = 11/305 (3%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII-----QSSS 67
           LP   +G  VAIGNFDG+HLGH  +L+Q    A   P+ V++F PHPR        ++  
Sbjct: 10  LPPDDRGAAVAIGNFDGVHLGHQAVLKQTSSAAAGVPLGVMTFEPHPREFFARQHGKTLD 69

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L     + + L K+G   L    FT   A  S   F +++LV+ + V  V+ G  F
Sbjct: 70  P-FRLMNADAKARRLSKLGVDRLYEISFTTALAELSDRDFARQILVDGMGVSHVVVGADF 128

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFGK R GD   L   G + GF  V I ++ +     VSS+NIR ALT+G   +AA +LG
Sbjct: 129 RFGKGRTGDAKTLAAYGAEMGF-GVTISDMISTPVGEVSSTNIRAALTEGRPQDAAAMLG 187

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---SYSGVANF 244
           +   IE +VI G++ GR LG+PTAN+ +        GVYAI+    D     +Y G A+ 
Sbjct: 188 HWHRIEGEVIRGDQRGRELGYPTANVSIDGLHQPMFGVYAIKVDVLDGAHVGTYDGAASI 247

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  P    N P   E+F+FDF  ++YG R +V+  ++LR E  F  ++ L   MG D  K
Sbjct: 248 GVRPMFGVNTP-NCENFLFDFQGDLYGSRISVALVEFLRGEENFDSLDALITQMGADCIK 306

Query: 305 ARKIL 309
           AR+IL
Sbjct: 307 AREIL 311


>gi|92118627|ref|YP_578356.1| riboflavin biosynthesis protein RibF [Nitrobacter hamburgensis X14]
 gi|91801521|gb|ABE63896.1| FMN adenylyltransferase [Nitrobacter hamburgensis X14]
          Length = 327

 Score =  198 bits (503), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 170/305 (55%), Gaps = 17/305 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VVA+GNFDG+HLGH  ++E A+ ++ +   P   ++F PHPR     ++P F L+  
Sbjct: 19  KGSVVAMGNFDGVHLGHRAVIEAALAMSRSRGKPAFAVTFEPHPRKFFSPNTPQFRLTDE 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G +  +   F    A  +A+ FI   L+  L+V  +  G  F FGK R G
Sbjct: 79  TSKLRLLAGAGLAGAVVMTFDTARAGTTAQDFIHHDLIARLDVSGIAVGYDFHFGKGRVG 138

Query: 136 DRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              +L     + G        V IDE      + VSSS IR AL +G + +A  +LG  +
Sbjct: 139 SPSLLLSEATRLGIEVDVRPPVDIDE------RPVSSSAIRMALAEGQIADATAMLGGPW 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRN 247
            +  +VIHGEK GR LG+PTAN++L  D  LK G+YA+R    + +D   + GVA+FGR 
Sbjct: 193 FVTGEVIHGEKRGRHLGYPTANIRLDKDCGLKHGIYAVRVGLGQGKDHRRFDGVASFGRR 252

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT   NG  LLE F+FDF  ++YG    V+F  ++R E+KF  I+ L   M +D  +AR 
Sbjct: 253 PTF-DNGAPLLEVFLFDFKGDLYGTVLDVAFIGFIRDELKFDSIDALIRQMDDDSARART 311

Query: 308 ILESS 312
            L ++
Sbjct: 312 QLAAA 316


>gi|99081911|ref|YP_614065.1| FMN adenylyltransferase / riboflavin kinase [Ruegeria sp. TM1040]
 gi|99038191|gb|ABF64803.1| FMN adenylyltransferase / riboflavin kinase [Ruegeria sp. TM1040]
          Length = 310

 Score =  198 bits (503), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 162/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G  VAIGNFDG+H GH  +++ A K A ++P+ V++F PHPR     ++P F L     
Sbjct: 15  RGATVAIGNFDGVHRGHRSVIDLARKAAPDAPLGVMTFEPHPREFFAPNAPPFRLMSAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    ++ + E+F + V+ E L +  V+ G  F FGK RAG  
Sbjct: 75  RAHRLEKIGVEKLYQLNFNHALSSLTPEEFARNVIAEGLGLSHVVVGADFCFGKGRAGTV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ G+  GF  V I  L       VSS+ IRTAL++G   +AA +LG+   IE +VI
Sbjct: 135 EDLQRFGQDMGF-GVTIAPLMGYSEHTVSSTAIRTALSEGRPRDAAAMLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GRTLGFPTAN  +        GVYA+     D   + SY G A+ G  P      
Sbjct: 194 GGEQRGRTLGFPTANQSIDGLHPPAFGVYAVLVDVLDGPHKGSYHGAASVGVRPMFDGEQ 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E+++FDF   +YG   +V   DYLR E+KF  +E     M  D  +AR IL S
Sbjct: 254 P-NIETYLFDFKGNLYGAHLSVGLVDYLRAELKFDGLEPFIAQMQADCDQARAILTS 309


>gi|301154982|emb|CBW14445.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           parainfluenzae T3T1]
          Length = 308

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/299 (40%), Positives = 167/299 (55%), Gaps = 16/299 (5%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLS 73
           +L G  + IGNFDG+HLGH  IL    + AN  N P+ V+ F P PR           L 
Sbjct: 13  YLSGCALTIGNFDGVHLGHQAILRHLRQKANALNLPMAVMLFEPQPREYFMGDKAPARLM 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +   L + G   +I  KF    A+  AEQFI+  LV  L VK +  G  F+FG  R
Sbjct: 73  RLRDKLHYLAQAGVDVVIVAKFDRTFADLPAEQFIEDWLVRKLNVKFLSIGDDFKFGAKR 132

Query: 134 AGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+++GF      T  +DELR      +SS+ IR AL K  + +A +LLG 
Sbjct: 133 LGNFAMLQQAGKQFGFEVEDSRTFCLDELR------ISSTAIREALAKDDLQHAQNLLGK 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ P
Sbjct: 187 PYRIFGRVIHGNKLGRTIGFPTANVRLHRQVNPVKGVYAVKARLKSGEIFNGVANMGKRP 246

Query: 249 TMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T+  NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   E LK  + +D K A+
Sbjct: 247 TI--NGTIQLLEVHLFDFSQNIYGQMIEVEFCHKIRDEIKFPSFEALKAQIEQDVKTAK 303


>gi|220920433|ref|YP_002495734.1| riboflavin biosynthesis protein RibF [Methylobacterium nodulans ORS
           2060]
 gi|219945039|gb|ACL55431.1| riboflavin biosynthesis protein RibF [Methylobacterium nodulans ORS
           2060]
          Length = 338

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 161/295 (54%), Gaps = 5/295 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
            + +P  L+G V AIGNFDG+H GH  ++    +IA     P  VL+F PHPR       
Sbjct: 28  GEPVPEGLRGAVAAIGNFDGLHRGHRALIAAVREIAAAAGRPSAVLTFEPHPREFFAPDV 87

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            +F L+    +  +L ++G   +   +F    A  SA  F+ ++L + L +  V+ G  F
Sbjct: 88  GMFRLTDEGAKLAVLARLGIDGVFVRRFDAALAGTSAAAFVGRLLKDELGLTGVVIGHDF 147

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLL 186
            FG+ R G   +LQ    ++G     I+ +     ++ VSSS IR AL  G V  A  LL
Sbjct: 148 HFGRGREGTPAVLQALCAEHGLTCRVIEPVAAECGEVPVSSSAIRAALEAGDVAGANRLL 207

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+R+ ++  V HG+K GRTLGFPTAN+ L P   L  G+YA+R R  D     GVA++GR
Sbjct: 208 GFRWFVQGVVRHGDKRGRTLGFPTANVAL-PACGLAHGIYAVRVRLADGALREGVASYGR 266

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            PT   NG  LLE+ +FDFS ++YGQR  V F  +LR E +F   E L   M ED
Sbjct: 267 RPTF-DNGAPLLETTLFDFSGDLYGQRIAVEFVGFLRGEARFDSAEALVAQMHED 320


>gi|254454631|ref|ZP_05068068.1| riboflavin biosynthesis protein RibF [Octadecabacter antarcticus
           238]
 gi|198269037|gb|EDY93307.1| riboflavin biosynthesis protein RibF [Octadecabacter antarcticus
           238]
          Length = 314

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/321 (37%), Positives = 173/321 (53%), Gaps = 18/321 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MH+  + +    +  + +G   AIGNFDG+HLGH  +++    +AN +P+ +L+F PHPR
Sbjct: 1   MHIIRDPDF---IAQNDRGAAAAIGNFDGVHLGHQAVIDLTRSVANGAPLGILTFEPHPR 57

Query: 61  TIIQSSS----PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                 S    P F L   + +   LEK+G S L    F    A  + E+F Q ++V+ L
Sbjct: 58  DYFAQMSDQVAPPFRLMNAASKANRLEKLGVSRLYEVPFNDALAALTPEEFAQTIIVDRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  V+ G+ F FGKDRAG+   LQ  G   GF  V I  +    +  VSS+ IR AL  
Sbjct: 118 GLTHVVVGSDFCFGKDRAGNATSLQAFGAAMGF-GVTIAPMLATAAGDVSSTAIRKALAD 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-- 234
           G    AA +LG+   I+  VI GE+ GR LG+PTANM +      K GVYA++    +  
Sbjct: 177 GSPRIAAEMLGHWHRIDGPVITGEQRGRDLGYPTANMSIDGLHPPKFGVYAVKVDVLEGP 236

Query: 235 -QTSYSGVANFGRNPTM---VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            + SY+G A+ G  P     VPN     E+++FDFS ++YG + +V+  DYLR E KF  
Sbjct: 237 HKGSYNGAASIGVRPMFGVNVPN----CETYLFDFSGDLYGTQLSVALVDYLRGEEKFDG 292

Query: 291 IEKLKIYMGEDEKKARKILES 311
           +E L   M  D  +AR IL +
Sbjct: 293 LEALITQMDADCVRARGILSN 313


>gi|149913704|ref|ZP_01902237.1| riboflavin biosynthesis protein RibF [Roseobacter sp. AzwK-3b]
 gi|149812824|gb|EDM72653.1| riboflavin biosynthesis protein RibF [Roseobacter sp. AzwK-3b]
          Length = 312

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+HLGH  +++ A + A +  +P+ VL+F PHPR      +P F L   
Sbjct: 15  RGASVAIGNFDGVHLGHQSVIDIAREHAADLGAPLGVLTFEPHPREYFAPDAPPFRLMSR 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L+K+G   L    F    A  S  +F + V+   L ++ V+ G  F FGK RAG
Sbjct: 75  EARAHRLQKLGIEKLYELNFNAAMAALSPYEFARTVIARGLGLRHVVVGADFCFGKGRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++ G + GF  V I EL   ++  VSS+ IR AL++G   +AA +LG+   I+  
Sbjct: 135 DARDLERFGREMGF-GVTIAELLEGRTGQVSSTAIRAALSEGRPRDAAAMLGHWHRIDGP 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTM-- 250
           V+ GE+ GR LG+PTANM +      + GVYA+    +D      Y G A+ G  P    
Sbjct: 194 VVGGEQRGRELGYPTANMSIEGLHPPRFGVYAVLVEVRDGPHAGQYHGAASLGVRPMFHG 253

Query: 251 -VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            VPN    LE+FIFDFS ++YG   +V+  +YLRPE  F  +E     M  D  +AR IL
Sbjct: 254 EVPN----LETFIFDFSGDLYGAELSVALVEYLRPEATFDSLEAFIAQMDADCARARDIL 309


>gi|256820203|ref|YP_003141482.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea DSM
           7271]
 gi|256581786|gb|ACU92921.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea DSM
           7271]
          Length = 308

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 171/293 (58%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+HLGH  I+E+ +  A    +  T+ +F PHPR ++Q    +  +     +
Sbjct: 17  VLTIGTFDGVHLGHQKIIERVVATARQEGLLATIFTFFPHPRMVVQHDKSLKLIHTLEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++L+++G   L+   F    A  +AE+F+  +LV+ L VK VI G   RFG++R  +  
Sbjct: 77  KQLLQRLGVDLLVVQPFNEAFAQLTAEEFVSTILVQHLNVKKVIIGYDHRFGRNRTANIS 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++  GEKYGF    I  ++      VSS+ IR AL KG V+ A H LG  +++   V+H
Sbjct: 137 DMRLFGEKYGFAVEEIS-VQEVDEVSVSSTKIREALNKGDVITAEHYLGTPYSLTGTVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLG+PTAN+Q++ D  L  K+GVYA+ +   D+    G+ + G+NPT+   G  
Sbjct: 196 GLKLGRTLGYPTANIQVTEDYKLIPKDGVYAV-YSYIDERKVYGMMSIGKNPTIEGKGA- 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E + FDF+ ++Y +  T+ F  YLR E KF  +  LK  + +DE  ARK +
Sbjct: 254 SIEVYFFDFNGDLYDRELTIYFVKYLREERKFSSVALLKKQLQDDETTARKAI 306


>gi|294139772|ref|YP_003555750.1| riboflavin biosynthesis protein RibF [Shewanella violacea DSS12]
 gi|293326241|dbj|BAJ00972.1| riboflavin biosynthesis protein RibF [Shewanella violacea DSS12]
          Length = 311

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 174/310 (56%), Gaps = 16/310 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     LP H  G V+ IGNFDG+H GH  ++ + +K A   N P T+++F P P+ +
Sbjct: 8   HNI-----LPAH-HGCVLTIGNFDGVHRGHAEVIAKLVKKARQLNVPATLMTFEPQPQEM 61

Query: 63  IQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S    LS  ++++KI  LE++G   L+   F  + A+ SA+ FI K+LVE L VK 
Sbjct: 62  FSGDSAPARLS--TLRDKIILLEELGIDRLVCINFNAKFADLSAQDFIDKLLVESLGVKY 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK R G+  +L+  GEK+ F  V          + VSS+ IR  L KG++ 
Sbjct: 120 LVIGDDFCFGKQRKGNFEMLKLAGEKHQFAVVSTQSFVLGDKR-VSSTEIRNQLAKGNLE 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    D   Y G
Sbjct: 179 QARRLLGHPFTLCGKVAHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKMYWDDSDIYDG 238

Query: 241 VANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           VAN G  PT+  NG +  LE  +FDF  ++YG+   V     +R E  FK ++ LK  + 
Sbjct: 239 VANVGFRPTV--NGQVCQLEVHLFDFDDDLYGRTVEVELVAKIRDEQPFKSLDALKKQIN 296

Query: 300 EDEKKARKIL 309
            D  KA+ +L
Sbjct: 297 NDADKAKALL 306


>gi|91978501|ref|YP_571160.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisB5]
 gi|91684957|gb|ABE41259.1| FMN adenylyltransferase / riboflavin kinase [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/286 (38%), Positives = 155/286 (54%), Gaps = 5/286 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VVA+GNFDG+H GH  ++   +++A    +P   ++F PHPR      +P F L+  
Sbjct: 18  KGAVVAMGNFDGVHRGHRAVIGACLEMARVRRAPAFAVTFEPHPRKFFSPDTPQFRLTDE 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L   G    +  +F    A  +A  FI   LV  L V+ +  G  F FGK R G
Sbjct: 78  PAKLRLLAGAGLDGAVVLRFDAARAATTAHDFINHELVGRLGVQGIAVGYDFHFGKGRGG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L       G   V +    +     VSSS IR AL +GH+  A  +LG  + I  +
Sbjct: 138 SPSLLVAEAPALGIE-VDVQPHIDFGDHPVSSSAIRRALEEGHIAAATEMLGSPWFITGE 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHGEK GR LG+PTAN++L P   LK G+YA+R   +    Y  VANFGR PT   NG 
Sbjct: 197 VIHGEKRGRELGYPTANIRLDPHCGLKHGIYAVRV-GRGGKHYDAVANFGRRPTF-DNGA 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            LLE+F+FDF+  +YG+R  ++F  ++R E KF+  E L   M +D
Sbjct: 255 PLLETFLFDFNGSLYGERLDIAFIAFIRDEEKFESAEALVRQMDDD 300


>gi|5932380|gb|AAD56933.1|AF180145_25 riboflavin kinase ribF [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 313

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 158/301 (52%), Gaps = 3/301 (0%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSP 68
           +  +P+HL G +VA+GNFDG HLGH  ++         S P+ V +F+PHP        P
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAHGSPWPCRSRPVIVATFDPHPVRFFCPDLP 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L    V+TG  F 
Sbjct: 67  PFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLTAAGVVTGRDFT 126

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G   +LQ  G+        I  + + +  I SS+ IR AL +G    AA +L  
Sbjct: 127 FGKGRKGGVDLLQAMGQNLNISVDTIMPVCDQQGAI-SSTRIREALKQGDPETAARVLSR 185

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  P
Sbjct: 186 PFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIRP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR  
Sbjct: 246 SFSPPTE-WLEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARAC 304

Query: 309 L 309
           L
Sbjct: 305 L 305


>gi|228472337|ref|ZP_04057103.1| riboflavin biosynthesis protein RibF [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276540|gb|EEK15264.1| riboflavin biosynthesis protein RibF [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 310

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 178/303 (58%), Gaps = 10/303 (3%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P H    V+ IG FDGIH+GH  I+ Q ++ A    +  TVL+F PHPR ++  S+PI  
Sbjct: 13  PEHT---VLTIGTFDGIHIGHQRIITQVVERAKEQDLLPTVLTFFPHPRMVLDPSAPIAL 69

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +     + ++L   G + L+   F+ E A  SA+ +++++LV  L  K +I G   RFGK
Sbjct: 70  IQTIEERAQLLASYGIAQLVIQPFSKEFAALSAQDYVRELLVGKLRAKEIIIGYDHRFGK 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R+     L+  GE+Y F    I  ++   S  VSS+ IR AL KG V  A H LGY F+
Sbjct: 130 NRSAGIEELKAFGEQYHFQVEEIP-VQEVDSLSVSSTKIRQALEKGDVQTANHYLGYSFS 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +   V+HG+K+GRTLG+PTAN+Q+  S  ++ K GVYA+    + +  + G+ + G+NPT
Sbjct: 189 LAGTVVHGQKLGRTLGYPTANLQIENSHKLIPKIGVYAVYMLWEGKKVF-GMLSIGKNPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   G   +E + FDFS ++YG+   + F D++R E+KF  +E LK  + +DE   + ++
Sbjct: 248 IEGKGE-SIEVYFFDFSSDLYGKEIRLYFIDFIRDEVKFPSLEALKAQLKKDEDSCKWLI 306

Query: 310 ESS 312
            ++
Sbjct: 307 ANA 309


>gi|213961797|ref|ZP_03390063.1| riboflavin biosynthesis protein RibF [Capnocytophaga sputigena
           Capno]
 gi|213955586|gb|EEB66902.1| riboflavin biosynthesis protein RibF [Capnocytophaga sputigena
           Capno]
          Length = 308

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/293 (38%), Positives = 170/293 (58%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+HLGH  I+E+ +  A    +  TV +F PHPR ++Q    +  +     +
Sbjct: 17  VLTIGTFDGVHLGHQKIVERVVTTARQEGLLATVFTFFPHPRMVVQHDKGLKLIHTLEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++L+++G   L+   F    A  SAE+F+  +LVE L VK VI G   RFG++R  +  
Sbjct: 77  KQLLQQLGVDLLVVQPFNEAFAQLSAEEFVSTILVEHLNVKKVIIGYDHRFGRNRTANID 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++  G+KYGF    I  ++      VSS+ IR AL KG V  A H LG  +++   V+H
Sbjct: 137 DMRLFGKKYGFAVEEIS-VQEVDEVSVSSTKIREALNKGDVTTAEHYLGTPYSLTGRVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLG+PTAN+Q++ D  L  K+GVYA+      +  Y G+ + G+NPT+   G  
Sbjct: 196 GLKLGRTLGYPTANIQVTEDYKLIPKDGVYAVYSYIGGRKVY-GMMSIGKNPTIEGKGA- 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E + FDF+  +Y Q+ T+ F  YLR E KF  I+ LK  + +DE  ARK +
Sbjct: 254 SIEVYFFDFNGNLYDQKLTIEFVQYLREEQKFATIDLLKKQLQDDETAARKAI 306


>gi|316935897|ref|YP_004110879.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           DX-1]
 gi|315603611|gb|ADU46146.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           DX-1]
          Length = 322

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 156/286 (54%), Gaps = 5/286 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VVA+GNFDG+H GH  ++   + +A    +P   ++F PHPR       P F L+  
Sbjct: 18  KGAVVAMGNFDGVHRGHRAVIGACLDMARIKKAPALAVTFEPHPRKFFSPDVPQFRLTDE 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G    +   F    A+ +A  FIQ  L+  L V+ +  G  F FGK R G
Sbjct: 78  TAKLRLLAGTGLDGAVILSFDARRASTTAHDFIQHELIGRLGVQGIAIGYDFHFGKGRGG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L       G   V +    +     VSSS IR  L +GH+  A  +LG  + +  +
Sbjct: 138 SPSMLVGEAPALGIE-VDVQPHVDFGDHPVSSSAIRKCLEQGHIAAATEMLGGPWFVTGE 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR LG+PTAN++L P+  LK G+YA+R   ++   Y  VANFGR PT   NG 
Sbjct: 197 VIHGDKRGRDLGYPTANIRLDPECSLKHGIYAVRV-GRNGRHYDAVANFGRRPTF-DNGA 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            LLE F+FDF++ +YG+   V+F  ++R E KF+ IE L   M +D
Sbjct: 255 ALLEVFVFDFNEPLYGETLDVAFIAFIRAEEKFESIEALIRQMDDD 300


>gi|157960910|ref|YP_001500944.1| riboflavin biosynthesis protein RibF [Shewanella pealeana ATCC
           700345]
 gi|157845910|gb|ABV86409.1| riboflavin biosynthesis protein RibF [Shewanella pealeana ATCC
           700345]
          Length = 311

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 176/311 (56%), Gaps = 12/311 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI     LP H +G V++IGNFDG+H GH  ++ + +K A +   P  V++F P PR +
Sbjct: 8   HNI-----LPKH-RGCVLSIGNFDGVHRGHAEVINRLVKKAEHLGLPAAVMTFEPQPREL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            Q  S    LS    +  +L+++    L+   F  + ++YSAE FI+++LV+ L VK ++
Sbjct: 62  FQGESAPARLSLLRDKIVLLDELKIDRLLCVNFNNKFSSYSAEDFIEQLLVKALGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R G+  +L+K GEK+GF  V          + VSS+ IR  L KG++  A
Sbjct: 122 VGDDFCFGKQRQGNFDMLRKAGEKFGFAVVSTQSFILGDKR-VSSTEIRKLLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HGEKIGRT+GFPTAN+ L   +    GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGKVAHGEKIGRTIGFPTANIALKRKVTPVRGVFAVKLYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  ++YG+   V     +R E  F  ++ LK  + +D
Sbjct: 241 NVGFRPTV--NGQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQIKDD 298

Query: 302 EKKARKILESS 312
             +A+ +L S 
Sbjct: 299 ANRAKALLGSD 309


>gi|307293213|ref|ZP_07573059.1| riboflavin biosynthesis protein RibF [Sphingobium chlorophenolicum
           L-1]
 gi|306881279|gb|EFN12495.1| riboflavin biosynthesis protein RibF [Sphingobium chlorophenolicum
           L-1]
          Length = 312

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 163/305 (53%), Gaps = 5/305 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS 67
           +  +P HL+G ++A+GNFDG H GH  +  +AI +A     P  + +F+PHP  + + ++
Sbjct: 7   SAPMPAHLRGSIMALGNFDGFHAGHQAVARRAIALARAQGRPAIIATFDPHPMRLFRPNT 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    +E++  + G  A++ + FT E A    + F+  +L +W  V  V+TG  F
Sbjct: 67  PWFRLTTLDQRERLFARAGADAMLVFDFTRELAALDPQAFVD-LLAQW-GVAGVVTGEDF 124

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGKDRAG    L++ G   G     +  +     +I+SS+ IR AL  G    A  LL 
Sbjct: 125 TFGKDRAGSIDTLKQLGAPLGLTAQAVAPITGQDGEIISSTRIREALKSGDCATATRLLT 184

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FTIE  V HG+K+GRT+GFPTAN+ +   +    G+YA+R    D     G AN G  
Sbjct: 185 RPFTIEGIVQHGDKLGRTIGFPTANVDMGHYLRPAYGIYAVRALLPDGRVLDGAANLGIR 244

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P    LLE   FDF++ +Y QR  V    +LRPE K   ++ L   +  D   AR+
Sbjct: 245 PSFDPPKE-LLEPHFFDFAESLYDQRIEVQLIHFLRPEAKLDGLDALMAAIARDCDDARQ 303

Query: 308 ILESS 312
           IL  +
Sbjct: 304 ILAGT 308


>gi|254477243|ref|ZP_05090629.1| riboflavin biosynthesis protein RibF [Ruegeria sp. R11]
 gi|214031486|gb|EEB72321.1| riboflavin biosynthesis protein RibF [Ruegeria sp. R11]
          Length = 310

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 162/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G   AIGNFDG+H GH  +++ A     ++P+ V++F PHPR      +P F L     
Sbjct: 15  RGASAAIGNFDGVHRGHQSVIDLARNAVPDAPLGVMTFEPHPREFFAPDAPAFRLMSAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    +  S E F +KV+ + L ++ V+ G+ F FGK RAG  
Sbjct: 75  RASRLEKLGVERLYQLNFNAALSGLSPEGFARKVIADGLGLRHVVVGSDFCFGKGRAGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ G + GF  V I  L       VSS+ IR AL+ G   +AA++LG+   IE +VI
Sbjct: 135 EDLQRFGAEMGF-GVTIAPLMEYSEDTVSSTAIRRALSDGRPRDAANMLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GR LG+PTANM +        GVYA+     D   + SY G A+ G  P    + 
Sbjct: 194 GGEQRGRELGYPTANMSIDGLHQPAFGVYAVLVDVLDGPNKGSYHGAASVGVRPMFDGSH 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E+F+FDF+  +YG   +V   +YLRPE+ F  ++ L   M  D +KAR IL +
Sbjct: 254 P-NIETFLFDFTGNLYGATLSVGLVEYLRPEMTFDGLDGLLAQMEADCEKARNILSA 309


>gi|240948304|ref|ZP_04752690.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
 gi|240297343|gb|EER47884.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
          Length = 324

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/322 (37%), Positives = 183/322 (56%), Gaps = 18/322 (5%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           FHN+  N   P   +G  ++IGNFDG+HLGH  IL +  + A   N P  V+ F P PR 
Sbjct: 7   FHNLANN---PIFQQGCALSIGNFDGVHLGHQNILARLNEKAKALNLPSVVMVFEPQPRE 63

Query: 62  IIQSSSPIFTLSPPS----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
                S   T +PP+    +++K+  LEK G   ++  +F+ + A  +A +FI+K+LVE 
Sbjct: 64  FFAKKSGNLTANPPARLMRLRDKLKYLEKAGVDFVLCVRFSAQFAKLTAHEFIEKLLVER 123

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTA 173
           L V+ +  G  F FG DR+G+   L   G+  GF    ++E   +  +S+ +SSS IR A
Sbjct: 124 LNVRYLSVGDDFHFGSDRSGNYQTLLNAGKTLGFE---VEESHTHSFESERISSSLIREA 180

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L+K  +  AA LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++  T+
Sbjct: 181 LSKDELTLAAKLLGKPYSIAGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVYAVKIETK 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               YSG+AN G  PT+    P LLE  +FDF+  IYGQ   V F   +R EIKF    +
Sbjct: 241 YGI-YSGIANVGNRPTINGTKP-LLEVHLFDFNHSIYGQAIEVLFLKKIRAEIKFASFNE 298

Query: 294 LKIYMGEDEKKARKILESSYPL 315
           L+  + +D ++A +    + P+
Sbjct: 299 LRQQIEQDREQAVRFFRGNDPV 320


>gi|332283970|ref|YP_004415881.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pusillimonas sp. T7-7]
 gi|330427923|gb|AEC19257.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pusillimonas sp. T7-7]
          Length = 300

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 166/292 (56%), Gaps = 7/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSP---PS 76
           + IGNFDG+H GH  IL +  K A       TV++F+PHPRT          L P    S
Sbjct: 1   MTIGNFDGVHRGHQAILARVRKQALERGLAATVMTFDPHPRTYFARRGQRPELVPTQISS 60

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           +++K+  L   G   +I  +F  + A+ SAE FI+ +LV+ L  + ++ G  FR+G  R+
Sbjct: 61  LRDKLTALAAHGLDQVILERFNQKMADMSAEDFIRHLLVQGLNTRWLLVGEDFRYGHKRS 120

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L++ G+++GF    I ++ +     +SSS +RTAL  G++  A HLLG+ + +  
Sbjct: 121 GDIELLRRAGQEHGFEVETIADVADEHGHRISSSELRTALAVGNLERAEHLLGHSYRLSG 180

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+K+GR++G+PT NM++     L+ G+Y +R       + +GVA+ G  PT+  +G
Sbjct: 181 HVVHGQKLGRSIGYPTLNMKVPTQCALRSGIYVVRAHGLGPQAINGVASLGVRPTISHDG 240

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            L+LE  + D   + YG+   V F +YLR E KF D+  +   +  D + AR
Sbjct: 241 RLMLEVHLLDCHIDAYGKLTCVEFLEYLRDEEKFPDLPTMIAAIDNDAQSAR 292


>gi|86751293|ref|YP_487789.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           HaA2]
 gi|86574321|gb|ABD08878.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G VVA+GNFDG+HLGH  ++   + +A    +P   ++F PHPR      +P F L+  
Sbjct: 18  RGAVVAMGNFDGVHLGHRAVIGACLDMARVRRAPALAVTFEPHPRKFFSPDTPQFRLTDE 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L   G    +  +F    A  +A  FI   L+  L V+ +  G  F FGK R G
Sbjct: 78  PAKLRLLAGAGLDGAVVLRFDAARAATTAHDFIHHELIGRLGVQGIAVGYDFHFGKGRGG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L       G   V +    +     VSSS IR AL   H+  A  +LG  + +  +
Sbjct: 138 SPAMLVGEAPALGIE-VDVQPHIDFGDHPVSSSAIRKALEDSHIAAATQMLGAPWFVTGE 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHGEK GR LG+PTAN++L P   LK G+YA+R   +    Y  VANFGR PT   NG 
Sbjct: 197 VIHGEKRGRDLGYPTANIRLDPQCGLKHGIYAVRV-GRGGKHYDAVANFGRRPTF-DNGA 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            LLE F+FDF++++YG+   V+F  ++R E KF+ IE L   M +D
Sbjct: 255 PLLEIFLFDFNEQLYGETLDVAFIAFIRDEEKFESIEALVRQMDDD 300


>gi|83941347|ref|ZP_00953809.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. EE-36]
 gi|83847167|gb|EAP85042.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. EE-36]
          Length = 310

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 157/297 (52%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G   AIGNFDG+HLGH  +++ A     ++P+ V++F PHPR      +P F L     
Sbjct: 15  QGATAAIGNFDGVHLGHRSVIDMARAALPDAPLGVVTFEPHPREYFAPDAPPFRLMGAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L+K+G   L    F    +  S   F Q+V+V+ L ++ V+ G  FRFGK RAG  
Sbjct: 75  RAHQLQKIGVDKLYELGFDAALSGLSPRAFAQEVIVDGLGLRHVVVGADFRFGKARAGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ  G + GF  V I  L       VSS+ IR ALT+    +AA +LG+   +E  ++
Sbjct: 135 EQLQAFGAEMGF-GVTIAPLMAKGPDTVSSTAIRNALTEARPRDAAAMLGHWHRVEGPIL 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTMVPNG 254
           HGEK GR LG+PTANM +        GVYA+            Y GVA+ G  P    N 
Sbjct: 194 HGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGRYHGVASLGVRPMFGEN- 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              LE+FIFDF  ++YG+  +V+  D+LR E KF  +E L   M  D  +AR IL +
Sbjct: 253 RANLETFIFDFKGDLYGKHVSVALVDHLRGEEKFDSLEALITQMDADSAQARSILAA 309


>gi|56551218|ref|YP_162057.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753147|ref|YP_003226040.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56542792|gb|AAV88946.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552510|gb|ACV75456.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 314

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 161/302 (53%), Gaps = 4/302 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSS 67
           +  +P+HL G +VA+GNFDG HLGH  ++  A+    A   P+ V +F+PHP        
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAAAVARGHAEGRPVIVATFDPHPVRFFCPDL 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L+   V+TG  F
Sbjct: 67  PPFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLKAAGVVTGRDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK R G   +LQ  G+        I  + + +  I SS+ IR AL +G    AA LL 
Sbjct: 127 TFGKGRKGGVDLLQAMGQNLNISVDTIMPVCDQQGAI-SSTRIREALKQGDPETAARLLS 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  
Sbjct: 186 RPFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR 
Sbjct: 246 PSFSPPTE-WLEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARA 304

Query: 308 IL 309
            L
Sbjct: 305 CL 306


>gi|126725855|ref|ZP_01741697.1| Riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF
           [Rhodobacterales bacterium HTCC2150]
 gi|126705059|gb|EBA04150.1| Riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF
           [Rhodobacterales bacterium HTCC2150]
          Length = 312

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 167/307 (54%), Gaps = 7/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
             LP   KGG   IGNFDG+H GH  +L+ A K A  N+ P+ VL+F+PHPR      +P
Sbjct: 8   NDLPASAKGGSAVIGNFDGVHRGHQAVLDIARKRAKDNDIPLGVLTFDPHPRQFFAPDAP 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L     +   L K+G   L +  F    ++++A +F + V+ E L +  ++ G  F 
Sbjct: 68  EFRLMNNEAKANRLAKLGVDYLYQLPFDKIMSSFTAREFAKTVIAEGLGLSHIVIGADFC 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G    L   G ++GF  V I  L    S  +SS++IR AL +G    A+ +LG+
Sbjct: 128 FGKGRLGTAQDLVDFGTQFGF-DVTIAPLLKADSDYISSTSIRRALAEGDPAIASDMLGH 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFG 245
              IE +VIHGEK GR LGFPTANM +    L K GVYA+     D   Q  Y G A+ G
Sbjct: 187 WHRIEGEVIHGEKRGRELGFPTANMSVKGLHLPKFGVYAVFATILDGPYQGVYQGAASLG 246

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             P    N P  LE+++FDF  ++YG   +++  +YLR E KF  ++ L   M  D  +A
Sbjct: 247 IRPMFGENTP-NLETYLFDFDGDLYGTHISIALVEYLRGEEKFDGLDALIDQMTLDCDRA 305

Query: 306 RKILESS 312
           RK+L ++
Sbjct: 306 RKVLANA 312


>gi|253573571|ref|ZP_04850914.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847099|gb|EES75104.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 314

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 180/308 (58%), Gaps = 16/308 (5%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +  H +  V+AIG FDG+HLGH  +++ A+++A     P +V++F+PHP+ +++      
Sbjct: 15  IEQHARPQVLAIGQFDGLHLGHASVIDSAVRLAGELGLPASVMTFHPHPKEVMKKGDYDG 74

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+PP  +E+IL +MG   +   +F    +  S + F+  +LV  L+V T + G  FR+G
Sbjct: 75  YLTPPKEKERILREMGVDYVYIVEFNDAFSRVSPQNFVSGILVP-LQVHTAVVGFDFRYG 133

Query: 131 KDRAGDRGILQK-RGEKYGFHTV---FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
               GD  +L++  G     HTV    ID       + VSSS IR AL +G +  A   L
Sbjct: 134 YRGEGDASMLRELSGNVLDVHTVPPFLID------GEKVSSSGIRKALQEGKIELANRWL 187

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFG 245
           G  +T+   V+HGEK GR LGFPTAN++L+   ++   GVYA+R  T++ T+YSGV N G
Sbjct: 188 GRTYTLRGTVMHGEKRGRQLGFPTANLKLAEHYVVPASGVYAVRV-TREGTTYSGVMNVG 246

Query: 246 RNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             PT   NG +  LE+ +FDFS EIY +  +V    Y+R E KF  +++L   +G+D + 
Sbjct: 247 VKPTFHENGKIFWLEAHLFDFSGEIYDESLSVELVHYIRAERKFGSLDELIAQIGQDAET 306

Query: 305 ARKILESS 312
           A+++L+ S
Sbjct: 307 AKRLLKDS 314


>gi|307244846|ref|ZP_07526945.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307253800|ref|ZP_07535654.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258256|ref|ZP_07539999.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306854291|gb|EFM86497.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306863284|gb|EFM95224.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867716|gb|EFM99561.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 341

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 176/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 90  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 150 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  I   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLITPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|27382591|ref|NP_774120.1| riboflavin biosynthesis bifunctional protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355763|dbj|BAC52745.1| riboflavin biosynthesis bifunctional protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 380

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 8/301 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPR 60
           V  +   + ++P   +G VVA+GNFDG+HLGH  ++  A+++  A+  P   L+F PHPR
Sbjct: 64  VIRDTTPDSAIP---RGAVVAMGNFDGVHLGHRAVIAAALEMGRAHGRPALALTFEPHPR 120

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++P F L+    + ++L   G S  +   F    A  SA+ FI   L+  L V  
Sbjct: 121 RFFSPNTPQFRLTDERAKLRLLAGTGLSGAVVMTFDKARAGTSAQDFIHHDLIGRLGVSA 180

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FGK R G   +L     + G   V +    +   + VSSS IR AL +G + 
Sbjct: 181 IAVGYDFHFGKGRVGSPSLLVNEAPRLGIE-VDVQPHVDFDERPVSSSAIRIALAEGQLD 239

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  +LG  + I  +VIHGEK GR LG+PTAN++L  +  LK G+YA+R   +      G
Sbjct: 240 EATTMLGAPWFITGEVIHGEKRGRDLGYPTANIRLDANCGLKHGIYAVRV-GRGAERLDG 298

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA+FGR PT   NG  LLE F+FDF  ++YGQ    +F  ++R E+KF  +E L   M +
Sbjct: 299 VASFGRRPTF-DNGAPLLEIFLFDFKGDLYGQALDCAFVGFIREELKFDSLEALIRQMDD 357

Query: 301 D 301
           D
Sbjct: 358 D 358


>gi|83854824|ref|ZP_00948354.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. NAS-14.1]
 gi|83842667|gb|EAP81834.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. NAS-14.1]
          Length = 310

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 158/297 (53%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G   AIGNFDG+HLGH  +++ A     ++P+ V++F PHPR      +P F L     
Sbjct: 15  QGATAAIGNFDGVHLGHRSVIDMARAALPDAPLGVVTFEPHPREYFAPDAPPFRLMGAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L+K+G   L    F    +  S   F Q+V+V+ L ++ V+ G  FRFGK RAG  
Sbjct: 75  RAHQLQKIGVDKLYELGFDAALSGLSPRAFAQEVIVDGLGLRHVVVGADFRFGKARAGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ  G + GF  V I  L       VSS+ IR ALT+    +AA +LG+   +E  ++
Sbjct: 135 EQLQAFGAEMGF-GVTIAPLMAKGPDTVSSTAIRNALTEARPRDAAAMLGHWHRVEGPIL 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTMVPNG 254
           HGEK GR LG+PTANM +        GVYA+            Y GVA+ G  P    N 
Sbjct: 194 HGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGRYHGVASLGVRPMFGEN- 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              LE+FIFDF  ++YG+  +V+  D+LR E KF +++ L   M  D  +AR IL +
Sbjct: 253 KANLETFIFDFKGDLYGKHVSVALVDHLRGEEKFDNLDALITQMDADSAQARSILAA 309


>gi|39937439|ref|NP_949715.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           CGA009]
 gi|192293222|ref|YP_001993827.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           TIE-1]
 gi|39651298|emb|CAE29820.1| putative riboflavin kinase ribF [Rhodopseudomonas palustris CGA009]
 gi|192286971|gb|ACF03352.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           TIE-1]
          Length = 322

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VVA+GNFDG+H GH  ++   + +A    +P   ++F PHPR       P F L+  
Sbjct: 18  KGAVVAMGNFDGVHRGHRAVIGACLDMARTKKAPALAVTFEPHPRKFFSPDVPQFRLTDE 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G    +   F    A+ +A  FIQ  L+  L V+ +  G  F FGK R G
Sbjct: 78  TAKLRLLAGTGLDGAVILSFDARRASTTAHDFIQHELIGRLGVQGIAIGYDFHFGKGRGG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L       G   V +    +     VSSS IR  L +GH+  A  +LG  + +  +
Sbjct: 138 SPSMLVAEAPSLGIE-VDVQPHVDFGDHPVSSSAIRKCLEEGHIAAATEMLGGPWFVTGE 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR LG+PTAN++L P   LK G+YA+R   +    Y  VANFGR PT   NG 
Sbjct: 197 VIHGDKRGRDLGYPTANIRLDPQCSLKHGIYAVRV-GRGGRHYDAVANFGRRPTF-DNGA 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            LLE F+FDF++ +YG+   V+F  ++R E KF+ IE L   M +D
Sbjct: 255 PLLEVFVFDFNEPLYGETLDVAFIAFIRDEEKFESIEALIRQMDDD 300


>gi|303251868|ref|ZP_07338039.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302649298|gb|EFL79483.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 320

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 176/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 9   NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 68

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 69  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 129 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 188 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 247 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 305

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 306 KDREQA 311


>gi|311107262|ref|YP_003980115.1| riboflavin biosynthesis protein RibF [Achromobacter xylosoxidans
           A8]
 gi|310761951|gb|ADP17400.1| riboflavin biosynthesis protein RibF [Achromobacter xylosoxidans
           A8]
          Length = 321

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 173/310 (55%), Gaps = 9/310 (2%)

Query: 6   NIEINQSLP--NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           ++ I +SLP  +      + IGNFDG+H GH  +L +  ++A +  +T  V++F PHPR 
Sbjct: 4   SLRIYRSLPPPDRRAPCALTIGNFDGVHRGHQAMLARVCQVARDRNLTPAVMTFEPHPRE 63

Query: 62  IIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
              + +    L+P  I   ++K+  L + G S ++  +F    A  SA  FI+++LV+ L
Sbjct: 64  YFATLNQRPELAPTRISGLRDKLAALARYGISQVVVERFNARLAEMSANAFIEQLLVQGL 123

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  FRFG  R+GD  +L++ G ++GF    + ++ + +   +SSS +RTAL  
Sbjct: 124 HAKWLLVGEDFRFGHKRSGDIDLLREAGLRHGFEVQTLADVTDQQGHRISSSEVRTALAV 183

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A HLLG+ + I   VIHG+K+GRTLGFPT N++++     + G+Y ++       
Sbjct: 184 GDLERARHLLGHPYHISGHVIHGQKLGRTLGFPTMNLRVAERCAARSGIYVVQVYGLADR 243

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
               VA+ G  PT+   G +LLES + D + + YG+   V F   LR E KF D+  L  
Sbjct: 244 PLPAVASLGVRPTVEDRGRVLLESHLLDETIDAYGKLVRVEFLQKLRDEEKFPDLPSLTA 303

Query: 297 YMGEDEKKAR 306
            + ED + AR
Sbjct: 304 AIAEDARNAR 313


>gi|307247021|ref|ZP_07529075.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306856473|gb|EFM88622.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 341

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 176/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 90  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 150 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|83309931|ref|YP_420195.1| FAD synthase [Magnetospirillum magneticum AMB-1]
 gi|82944772|dbj|BAE49636.1| FAD synthase [Magnetospirillum magneticum AMB-1]
          Length = 351

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 169/305 (55%), Gaps = 7/305 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFT 71
           P+H +G VVA+GNFDG+HLGH  ++  A +IA +  +   V++F PHPR++     P F 
Sbjct: 34  PDH-RGCVVALGNFDGVHLGHQAVILTARRIAQDLGVAHAVMTFEPHPRSLFNPDQPPFR 92

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P  ++ +++E +G   L +  F  + A  +A +F+  VLV  ++   V+ G  + FGK
Sbjct: 93  LTPFRVKSRLIEALGTDFLYQQHFDRDFAAMTALEFVGGVLVGCMQASHVVVGYDYVFGK 152

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R G    LQK GE+ GF    +     +  +  SS+ +R  L  G    AA LLG+ + 
Sbjct: 153 GRLGTGAFLQKCGEESGFGVTVVPPAMADHGETYSSTAVREHLVAGRPDAAARLLGHYWE 212

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRNP 248
           +E  V HG+  GR LGFPTAN++L        GVYA+R    +      + GVANFGR P
Sbjct: 213 VEGRVEHGDARGRLLGFPTANLRLGEYQRPASGVYAVRAGIDKGGATVWHDGVANFGRRP 272

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T       L+E  + DF++++YG+   V+  +++RPE +F  + +L   +  D +  R++
Sbjct: 273 TFDKTDE-LMEVHLLDFNEDLYGRHLRVALVEHIRPERRFSGLAELTTQITADVETGRRL 331

Query: 309 LESSY 313
           L + +
Sbjct: 332 LAARH 336


>gi|241760883|ref|ZP_04758972.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374502|gb|EER63963.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 314

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 161/302 (53%), Gaps = 4/302 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS 67
           +  +P+HL G +VA+GNFDG HLGH  ++  A+  A     P+ V +F+PHP        
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAAAVARAHAEGRPVIVATFDPHPVRFFCPDL 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L+   V+TG  F
Sbjct: 67  PPFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLKAAGVVTGRDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK R G   +LQ  G+        I  + + +  I SS+ IR AL +G    AA LL 
Sbjct: 127 TFGKGRKGGVDLLQAMGQSLNISVDTIMPVCDQQGAI-SSTRIREALKQGDPETAARLLS 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  
Sbjct: 186 RPFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR 
Sbjct: 246 PSFSPPTE-WLEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARA 304

Query: 308 IL 309
            L
Sbjct: 305 CL 306


>gi|119774060|ref|YP_926800.1| riboflavin biosynthesis protein RibF [Shewanella amazonensis SB2B]
 gi|119766560|gb|ABL99130.1| riboflavin kinase / FMN adenylyltransferase [Shewanella amazonensis
           SB2B]
          Length = 311

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/309 (36%), Positives = 176/309 (56%), Gaps = 17/309 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSS 66
           I+  LP H +G V+ IGNFDG+H GH  ++   ++ A +   P T+++F P P+ + +  
Sbjct: 7   IHNILPAH-RGCVLTIGNFDGVHRGHAKVIASLVERAKHFGLPATLMTFEPQPQELFRGD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                LS    +  +L+++G   L+   F  + A+   E FI+ +LV+ L VK ++ G  
Sbjct: 66  DAPARLSLLRDKIVLLDELGIDRLLCVNFNRKFASMDPEHFIEDLLVKKLGVKYLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           F FGK RAG+  +L+K GE++GF     H+  + +LR      VSS+ +R  L KG++  
Sbjct: 126 FCFGKSRAGNFDMLKKAGERFGFAVVNTHSFMVGDLR------VSSTAVREQLAKGNLEQ 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L   ++   GV+A++    D   Y GV
Sbjct: 180 ARRLLGHPFTLCGRVAHGQKIGRTIGFPTANIALKRKVVPVRGVFAVKLWWDDSDIYEGV 239

Query: 242 ANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           AN G  PT+  NG +  LE  +FDF  ++YG+R  V     +R E  F+ ++ LK  +  
Sbjct: 240 ANVGFRPTV--NGQVCQLEVHLFDFEGDLYGKRVEVELVAKIRDEQPFESLDALKKQIWN 297

Query: 301 DEKKARKIL 309
           D  +AR +L
Sbjct: 298 DADRARALL 306


>gi|163750657|ref|ZP_02157894.1| riboflavin biosynthesis protein RibF [Shewanella benthica KT99]
 gi|161329652|gb|EDQ00643.1| riboflavin biosynthesis protein RibF [Shewanella benthica KT99]
          Length = 311

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 173/310 (55%), Gaps = 16/310 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     LP H  G V+ IGNFDG+H GH  ++ + +K A   N P T++ F P P+ +
Sbjct: 8   HNI-----LPAH-HGCVLTIGNFDGVHRGHAEVIAKLVKKARQLNVPATLMIFEPQPQEM 61

Query: 63  IQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +  S    LS  S+++KI  LE++G   L+   F  + A+ SA+ FI K+LVE L VK 
Sbjct: 62  FRGDSAPARLS--SLRDKIILLEELGIDRLVCINFNAKFADLSAQDFIDKLLVESLGVKY 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK R G+  +LQ  G+K+ F  V          + VSS+ IR  L KG++ 
Sbjct: 120 LVIGDDFCFGKQRKGNFEMLQSAGKKHQFAVVSTQSFALGDKR-VSSTEIRNQLAKGNLE 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG+ F +   V HGEKIGRTLGFPTAN+ L   +    GV+A++        Y G
Sbjct: 179 QARRLLGHPFILCGKVSHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKMYWDGSDIYDG 238

Query: 241 VANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           VAN G  PT+  NG + LLE  +FDF  ++YG+   V     +R E  FK ++ LK  + 
Sbjct: 239 VANVGFRPTV--NGQVCLLEVHLFDFDDDLYGRTVEVELVAKIRDEKPFKSLDALKKQIN 296

Query: 300 EDEKKARKIL 309
            D  KA+ +L
Sbjct: 297 NDADKAKALL 306


>gi|114769409|ref|ZP_01447035.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HTCC2255]
 gi|114550326|gb|EAU53207.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HTCC2255]
          Length = 321

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/308 (38%), Positives = 167/308 (54%), Gaps = 7/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
           Q + +  +G V AIGNFDG+HLGH   L L Q I   + S +  L+F PHPR     +S 
Sbjct: 8   QFIADEDRGAVAAIGNFDGVHLGHQAALNLVQEIAKESGSYVGTLTFEPHPREYFAPTST 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L     +   LEK+G   L +  F    +  SA +F + V+   L +  VI G  F 
Sbjct: 68  AFRLMSADAKANRLEKLGVERLYQLNFNAALSALSAREFARDVIHNALGLTHVIVGADFC 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGKDRAG    L + G+++GF  V I EL  +  Q+ SS+ IR AL+ G   +AA +LG+
Sbjct: 128 FGKDRAGAASDLIQFGKEFGF-KVTIAELLKDNDQVFSSTAIRNALSDGKPEDAARMLGH 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFG 245
              IE  VI G++ GR LG+PTAN+ ++     K GVYA+     D   Q  Y G A+ G
Sbjct: 187 LHRIEGPVIQGDQRGRELGYPTANLSINGLHPPKYGVYAVTVDILDGPSQGRYFGAASIG 246

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT     P  LE F+FDF  +IYG   +V+  +Y RPE+KF  ++ L + M +D   A
Sbjct: 247 ERPTFGVYKP-NLEVFLFDFHADIYGANISVALVNYQRPELKFDTLDALIVQMNKDCMVA 305

Query: 306 RKILESSY 313
           ++ L + Y
Sbjct: 306 KETLNNLY 313


>gi|32033772|ref|ZP_00134057.1| COG0196: FAD synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126207533|ref|YP_001052758.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           L20]
 gi|126096325|gb|ABN73153.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 320

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 176/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 9   NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 68

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 69  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 129 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 188 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 247 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 305

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 306 KDREQA 311


>gi|332185355|ref|ZP_08387103.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. S17]
 gi|332014333|gb|EGI56390.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. S17]
          Length = 312

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 169/313 (53%), Gaps = 4/313 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
              ++  + +P  L GG+VA+GNFDG HLGH  ++  A+  A     P  V +F+PHP  
Sbjct: 1   MQRLDGAKPVPASLAGGIVALGNFDGFHLGHQAVVGAAVARARAEWRPALVATFDPHPVR 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           + +  +  F L+    + ++    G  A++ ++F    A  +A  F+++ L+  L++  V
Sbjct: 61  LFKPDAEPFRLTSLEQRARLFAAAGVDAMMVFRFDAALAALTARAFVEERLLGDLKIGGV 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FG+ R+G    L+  G + GF +  +  +  ++ + VSS+ IR  L  G   +
Sbjct: 121 VTGEDFTFGRGRSGTVATLRDWGRELGFSSDAVAPVALDR-ETVSSTRIRQHLIAGEPRD 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LL   F IE  V HG+K+GRT+G+PTAN+ +   +    G+YA+R R  D     G 
Sbjct: 180 AARLLTRPFAIEGVVQHGDKLGRTIGYPTANLDMGDYLRPAYGIYAVRGRLDDGRVLDGA 239

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  P   P    LLE + FDF  ++YGQR +V   DYLRPE KF  ++ L   M  D
Sbjct: 240 ANLGIRPQFDPPKE-LLEPYFFDFQGDLYGQRLSVELIDYLRPEAKFDSLDALVAQMDAD 298

Query: 302 EKKARKILESSYP 314
             +AR IL S  P
Sbjct: 299 CARARTILSSHNP 311


>gi|85717166|ref|ZP_01048124.1| riboflavin kinase / FAD synthetase [Nitrobacter sp. Nb-311A]
 gi|85695999|gb|EAQ33899.1| riboflavin kinase / FAD synthetase [Nitrobacter sp. Nb-311A]
          Length = 303

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/283 (36%), Positives = 159/283 (56%), Gaps = 7/283 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +GNFDG+HLGH  ++  A ++A++   P   ++F PHPR     ++P F L+  + + ++
Sbjct: 1   MGNFDGVHLGHRAVIAAAFEMAHSRGKPAFAVTFEPHPRKFFSPNAPQFRLTDETNKLRL 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L   G    +   F    A  +A+ FI   L+E L V  +  G  FRFGK R G   +L 
Sbjct: 61  LAGAGLDGAVVMTFDAARAGTTAQDFIHHDLIERLGVSGIAVGYDFRFGKGRVGSPSLLV 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
               + G   V +    + + + VSSS +R AL +  + +A  +LG  + +  +VIHGEK
Sbjct: 121 SEAARLGIE-VNVQPPVDIEERPVSSSAVRKALVEARIADATAMLGGPWFVTGEVIHGEK 179

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            GR LG+PTAN++L PD  L+ G+YA+R    + +D   + GVA+FGR PT   NG  LL
Sbjct: 180 RGRGLGYPTANIRLDPDCGLRHGIYAVRVGCGKGKDHRRFDGVASFGRRPTF-DNGAPLL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E F+FDF  ++YG    V+F  ++R E+KF  I+ L   M +D
Sbjct: 239 EVFLFDFQGDLYGTMLDVAFIGFIRNELKFDGIKTLVRQMDDD 281


>gi|23016354|ref|ZP_00056111.1| COG0196: FAD synthase [Magnetospirillum magnetotacticum MS-1]
          Length = 333

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 168/303 (55%), Gaps = 7/303 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFT 71
           P+H +G VVA+GNFDG+HLGH  ++  A ++A    +   V++F PHPRT+       F 
Sbjct: 12  PDH-RGCVVALGNFDGVHLGHQAVILTARRMAQELGVAHAVMTFEPHPRTLFNPDQAAFR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P  ++ +++E +G   L +  F  + A  +A +F+  VLV  L+V  V+ G  + FGK
Sbjct: 71  LTPFRVKARLIEALGTDFLYQQHFDRDFAAMTALEFVGDVLVGCLKVSHVVVGYDYVFGK 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R G    LQK GE+ GF    +     +  +  SS+ +R  L  G    AA LLG+ + 
Sbjct: 131 GRLGTGAFLQKCGEESGFGVTVVPPAMADHGETYSSTAVREHLVAGRPDCAARLLGHYWE 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRNP 248
           +E  V HG+  GR LGFPTAN++L        GVYA+R    +      + GVANFGR P
Sbjct: 191 VEGRVEHGDARGRLLGFPTANLRLGEYQRPAGGVYAVRAGIDKGGATVWHDGVANFGRRP 250

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T       L+E  + DF++++YG+   V+  +++RPE KF  +++L   +  D +  R+I
Sbjct: 251 TFDKTDE-LMEVHLLDFNEDLYGRHLRVALVEHIRPERKFGGLDELTHQITADVEAGRRI 309

Query: 309 LES 311
           L +
Sbjct: 310 LAA 312


>gi|315225627|ref|ZP_07867436.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea
           F0287]
 gi|314944444|gb|EFS96484.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea
           F0287]
          Length = 308

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 170/293 (58%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+HLGH  I+E+ +  A    +  T+ +F PHPR ++Q    +  +     +
Sbjct: 17  VLTIGTFDGVHLGHQKIIERVVTTARQEGLLATIFTFFPHPRMVVQHDKSLKLIHTLEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++L+++G   L+   F    A  +AE+F+  +LV+ L VK VI G   RFG++R  +  
Sbjct: 77  KQLLQQLGVDLLVVQPFNEAFAQLTAEEFVSTILVQHLNVKKVIIGYDHRFGRNRTANIS 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++  GEKYGF    I  ++      VSS+ IR AL KG V+ A H LG  +++   V+H
Sbjct: 137 DMRLFGEKYGFAVEEIS-VQEVDEVSVSSTKIREALNKGDVITAEHYLGTPYSLTGTVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLG+PTAN+Q++ D  L  K+GVYA+      +  Y G+ + G+NPT+   G  
Sbjct: 196 GLKLGRTLGYPTANIQVTEDYKLIPKDGVYAVYSYIGARKVY-GMMSIGKNPTIEGKGA- 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E + FDF+ ++Y +  T+ F  YLR E KF  +  LK  + +DE  ARK +
Sbjct: 254 SIEVYFFDFNGDLYDRELTIYFVKYLREERKFSSVALLKKQLRDDETTARKAI 306


>gi|148264727|ref|YP_001231433.1| riboflavin biosynthesis protein RibF [Geobacter uraniireducens Rf4]
 gi|146398227|gb|ABQ26860.1| riboflavin kinase / FMN adenylyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 320

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 181/325 (55%), Gaps = 10/325 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F N+ +I++ LPN     VV IGNFDG+HLGH  I  +  ++A        V++F P
Sbjct: 1   MIIFKNLSDISEKLPN----AVVTIGNFDGVHLGHREIFRRVKQLAAELGGVSVVVTFVP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        ++  + +E ++E  G   LI   F  + A  +A +F+  VLVE + 
Sbjct: 57  HPLKVLAPEKSPLLINTYAEKETLIEASGIDYLIEIPFDEKFAAITAREFVGTVLVEKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V  ++ G  + FG++R GD  +L++ GE+  F    ++ + N ++ I SSS IRT +  G
Sbjct: 117 VNKLVIGYDYAFGRNREGDVALLRQLGEELSFKVEVLEPISNGRT-IFSSSLIRTMMMNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V     LLG  F++   V+HG   G+ LGFPTAN++   ++L K+GVYA++ +  D   
Sbjct: 176 DVKGVVSLLGRHFSLGGTVVHGHHRGKGLGFPTANIETDKELLPKDGVYAVKVKI-DDVL 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT   +  L +E F+FDF  ++YG+   + F D +R E+ F D+  L+  
Sbjct: 235 YDGACNIGSNPTF-KDERLAIEVFLFDFEGDLYGKDARLYFIDRIRGELTFPDVPSLQKA 293

Query: 298 MGEDEKKARKILESSYPLSERDRII 322
           + +D ++ R+IL  +  +  R+ ++
Sbjct: 294 IAKDIERCREILRDAAIIEYREYLV 318


>gi|317407732|gb|EFV87661.1| riboflavin biosynthesis protein [Achromobacter xylosoxidans C54]
          Length = 335

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 172/309 (55%), Gaps = 9/309 (2%)

Query: 7   IEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           + I++SLP   +     + IGNFDG+H GH  +L +  ++A +  +T  V++F PHPR  
Sbjct: 19  LRIHRSLPPPAQRAPSALTIGNFDGVHRGHQAMLARVCQVARDRGLTPAVMTFEPHPREY 78

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
             + +    L+P  I   ++K+  L + G S ++  +F    A  SA  FI+ +LV  ++
Sbjct: 79  FATLNQRPELAPTRISGLRDKLAALARYGISQVVVERFNARLAEMSANAFIENLLVRGMD 138

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G  FRFG  R+GD  +L++ G ++GF    + ++ +     +SSS +RTAL  G
Sbjct: 139 TKWLLVGEDFRFGHKRSGDIDLLREAGLRHGFEVQTLADVTDRHGHRISSSEVRTALAVG 198

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A HLLG+ F I   VIHG+K+GRTLGFPT N++++     + G+Y ++     + +
Sbjct: 199 DLDRARHLLGHPFHISGHVIHGQKLGRTLGFPTMNLRVAERCAARSGIYVVQVYGLAERA 258

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VA+ G  PT+   G +LLE+ + D +   YG+   V F   LR E KF D+  L   
Sbjct: 259 LPAVASLGVRPTVEDRGRVLLEAHLLDETVNAYGKLVRVEFLQKLRDEEKFPDLPSLTAA 318

Query: 298 MGEDEKKAR 306
           + ED + AR
Sbjct: 319 IAEDARNAR 327


>gi|170725651|ref|YP_001759677.1| riboflavin biosynthesis protein RibF [Shewanella woodyi ATCC 51908]
 gi|169810998|gb|ACA85582.1| riboflavin biosynthesis protein RibF [Shewanella woodyi ATCC 51908]
          Length = 311

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 169/305 (55%), Gaps = 9/305 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSS 66
           IN  LP H  G V+ IGNFDG+H GH  ++ + +K A   N P T+++F P P+ + +  
Sbjct: 7   INNILPAH-HGCVLTIGNFDGVHRGHAEVISKLVKKARQLNVPATLMTFEPQPQEMFRGD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           S    LS    +  +LE++G   L+   F  + A   AE FI K+LV+ L VK ++ G  
Sbjct: 66  SAPARLSTLRDKIVLLEELGIDRLVCINFNTKFAEMPAEDFIDKLLVKSLGVKYLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           F FGK+R G+  +L+  GEK+ F  V     L  +K   VSS+ IR  L KG +  A  L
Sbjct: 126 FCFGKERMGNFDMLRTSGEKHQFAVVSTQSFLLGDKR--VSSTEIRGLLAKGKMEQARRL 183

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ FT+   V HGE+IGRT+GFPTAN+ L   +    GV+A++    D   Y GVAN G
Sbjct: 184 LGHPFTLSGRVAHGEEIGRTIGFPTANIALKRKVSPVRGVFAVKLYWDDSDVYDGVANVG 243

Query: 246 RNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             PT+  NG    LE  +FDF  ++YG+   V     +R E  F+ +E L+  +  D  K
Sbjct: 244 FRPTV--NGQKCQLEVHLFDFDGDLYGRTVEVELVAKIRDEQPFQSLEALRKQINNDADK 301

Query: 305 ARKIL 309
           A+ +L
Sbjct: 302 AKALL 306


>gi|149200970|ref|ZP_01877945.1| riboflavin biosynthesis protein RibF [Roseovarius sp. TM1035]
 gi|149145303|gb|EDM33329.1| riboflavin biosynthesis protein RibF [Roseovarius sp. TM1035]
          Length = 312

 Score =  192 bits (489), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 161/299 (53%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+H+GH  ++E A        +P+ +L+F PHPR      +P F L   
Sbjct: 15  RGASVAIGNFDGVHIGHRSVIELARAAGERIGAPLGILTFEPHPREYFAPDAPPFRLMGR 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   LEK+G   L   KF    A  S   F + V+ + L +K V+ G+ F FGK RAG
Sbjct: 75  EARAHRLEKLGVERLYEIKFNAGLAALSPRAFAENVIRDGLGLKHVVVGSDFCFGKGRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  ILQ+ G + GF  V I  L   +S  VSS+ IR AL++G    AA +LG+   I+  
Sbjct: 135 NAAILQEFGREMGF-GVTIATLLEGESGQVSSTAIRAALSEGAPRAAAAMLGHWHRIDGP 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVP 252
           VI GE+ GRTLG+PTANM +      K G+YA+     D   +  Y G A+ G  P M  
Sbjct: 194 VIGGEQRGRTLGYPTANMSIKGLHPPKFGIYAVLVDVLDGPHKGQYHGAASLGVRP-MFQ 252

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                +E+FIFDF+ ++YG   +V   +YLRPE  F  +E     M  D  +AR +L +
Sbjct: 253 GEEANVETFIFDFTGDLYGANLSVGLIEYLRPEATFDSLEAFIAQMDADCLRARSVLAA 311


>gi|254488274|ref|ZP_05101479.1| riboflavin biosynthesis protein RibF [Roseobacter sp. GAI101]
 gi|214045143|gb|EEB85781.1| riboflavin biosynthesis protein RibF [Roseobacter sp. GAI101]
          Length = 310

 Score =  192 bits (489), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/297 (38%), Positives = 156/297 (52%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G   AIGNFDG+HLGH  +++ A      +P+ V++F PHPR     ++  F L  P  
Sbjct: 15  RGASAAIGNFDGVHLGHRSVIDLARAALPEAPLGVVTFEPHPRAFFAPNAAPFRLMGPEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L   KF    A  S   F + VLVE L ++ V+ G  F FGK+RAG  
Sbjct: 75  RAHQLEKIGVDKLYEVKFDAALAGLSPYDFAKNVLVEGLGLRHVVVGADFCFGKNRAGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             + + G + GF  V +  L       VSS+ IR ALT G    AA +LG+   +E  V+
Sbjct: 135 AQMVEFGAQLGF-GVTVAPLMAQGESTVSSTAIRAALTNGKPREAAAMLGHWHRLEGPVL 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTMVPNG 254
           HGEK GR LG+PTANM +        GVYA+            Y GVA+ G  P    N 
Sbjct: 194 HGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGRYHGVASLGVRPMFGEN- 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              LE+FIFDF  ++YG+  +V+  ++LR E KF  I+ L   M  D  +AR IL +
Sbjct: 253 KANLETFIFDFKGDLYGKHISVALIEHLRGEEKFDGIDTLITQMDADSAQARAILAA 309


>gi|5881832|emb|CAB55633.1| riboflavin biosynthesis protein [Gluconobacter oxydans]
          Length = 307

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 162/301 (53%), Gaps = 1/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +++P   +  V A+GNFDG+H GH  +L+       + P++V++F+PHPRT+ +   P F
Sbjct: 8   RNIPAAARNTVAALGNFDGVHRGHVHLLDTLRMARPDHPLSVVTFDPHPRTLFRPQDPPF 67

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L  P ++   L + G   + +  F  E +  SAEQF+  VLV  L V  V  G  F FG
Sbjct: 68  RLMLPDVRAAALGEQGVDHVFQIPFDAEFSRLSAEQFVNDVLVNGLGVAHVACGADFAFG 127

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G+   L+     +G     + +L +    I SSS IR  L +G+   AA  LG  +
Sbjct: 128 HRRTGNIERLETLLAPHGIGLTIVPQLSDEGGPI-SSSRIRRLLQEGYPERAAQELGRPW 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG++ GR LGFPTAN+ L+  +    GVYA R    D     GVAN GR PT+
Sbjct: 187 SITGPVMHGDQRGRLLGFPTANIPLTQHVEPARGVYAARVTLPDGRVIPGVANIGRRPTI 246

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  LE  +FDF++++YGQ  +V+    LR E +F  +++LK  +  D  +AR IL 
Sbjct: 247 NDGQESRLEVHLFDFNEDLYGQILSVALIALLREEKRFSGLDELKTQIAADAAQARSILN 306

Query: 311 S 311
           +
Sbjct: 307 A 307


>gi|197118976|ref|YP_002139403.1| bifunctional riboflavin kinase/FAD synthetase [Geobacter
           bemidjiensis Bem]
 gi|197088336|gb|ACH39607.1| riboflavin kinase and FAD synthetase [Geobacter bemidjiensis Bem]
          Length = 323

 Score =  192 bits (487), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 175/323 (54%), Gaps = 12/323 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFN 56
           M +F +I     +   L+   V IGNFDG+HLGH  I     E+A +++  S   V++F 
Sbjct: 1   MVIFRSI---SDIKEKLRHPAVTIGNFDGVHLGHREIFRRVRERAAELSGVS--VVVTFV 55

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP  ++ +   I  ++    +E ++E  G   L+   F  E A   A  F+QKVLV+ +
Sbjct: 56  PHPLKVLGAHKGIRLITTRREKEFLIESAGIDYLLEIPFDREFAAVPAADFVQKVLVDAI 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V++++ G  + FG+ R G+  +L+  GE+YG+    +D + +N + + SS+ +R  ++K
Sbjct: 116 GVESLVIGYDYAFGRGREGNVQLLRGMGERYGYSVEVLDPI-SNGATVYSSTKVRDMVSK 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G V     +LG  + I   V+HG + GR LGFPTAN+ +  D+L   GVYA++       
Sbjct: 175 GDVEGVVGVLGRHYAITGTVVHGHQRGRGLGFPTANLAMEKDLLPAAGVYAVKVCIGSDL 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G  N G NPT   NG L LE F+FD  +++YG   TV F + LR E +F D++ LK 
Sbjct: 235 -LDGACNIGTNPTF-GNGALSLEVFLFDLDRDLYGLEVTVFFIERLREERRFDDLQALKE 292

Query: 297 YMGEDEKKARKILESSYPLSERD 319
            +  D  + R IL  + P+   D
Sbjct: 293 QIALDVSRCRGILHDAEPVGAGD 315


>gi|89069025|ref|ZP_01156406.1| riboflavin biosynthesis protein RibF [Oceanicola granulosus
           HTCC2516]
 gi|89045394|gb|EAR51459.1| riboflavin biosynthesis protein RibF [Oceanicola granulosus
           HTCC2516]
          Length = 312

 Score =  192 bits (487), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/297 (36%), Positives = 162/297 (54%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+HLGH  +++  +A+      P+ V++F PHPR +    SP F L   
Sbjct: 15  RGAAVAIGNFDGVHLGHGAVIDTTRALAAEQGVPLGVMTFEPHPRQVFAPDSPPFRLMNA 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L K+G  AL    FT   A  S E F +++L + L V  V+ G  F FGK RAG
Sbjct: 75  ESRANRLAKLGVEALYEVPFTPTLAGLSPEAFAREILADALGVAHVVVGQDFYFGKGRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L + G + GF       L   +++I SS+ IRTAL++G   +AA +LG+   I+ +
Sbjct: 135 TAETLGRLGAELGFGVTVAPLLALGETEI-SSTAIRTALSEGRPRDAAGMLGHWHRIDGE 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTSYSGVANFGRNPTMVP 252
           V+HG++ GR LG+PTANM +      + G+YA++          SY G A+ G  PT   
Sbjct: 194 VVHGDQRGRLLGYPTANMSIEGLHPPRFGIYAVKVDVLGGPHAGSYDGAASIGVRPTFGV 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N     E+F+FDF+ ++Y    +V+  +YLR E +F  +E L   M  D  +AR +L
Sbjct: 254 NS-ANCETFLFDFTGDLYNTHLSVALIEYLRDEERFDSVEALVAQMDADCARARALL 309


>gi|254418457|ref|ZP_05032181.1| riboflavin biosynthesis protein RibF [Brevundimonas sp. BAL3]
 gi|196184634|gb|EDX79610.1| riboflavin biosynthesis protein RibF [Brevundimonas sp. BAL3]
          Length = 309

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 155/303 (51%), Gaps = 3/303 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + LPN L+G  VA+G FDG+H GH  ++  A   A    +P+ V+SF+PHPR   Q  + 
Sbjct: 8   RDLPNALRGAAVAVGAFDGVHRGHQAVIAGAKAAAERLGAPLGVVSFDPHPRRWFQPEAA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L       + L  +G   L    F  E A  S   F +KVL   L V+    G  F 
Sbjct: 68  PFRLMTADQMAQALAPLGVDILYLLPFDGEMAGMSDADFAEKVLARGLGVRHAAVGFDFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R+G    L+  GE+ GF     + L +     +SSS +R AL  G +  AA +LG 
Sbjct: 128 FGKGRSGSPEALKTYGERLGFTVSVAERLDDADGLKLSSSAVREALKAGDMDRAAAILGR 187

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F ++ +VIHG+K GRT+G PTAN+ L   +    GVYA R R  D    +GVA+ G  P
Sbjct: 188 PFALQGEVIHGDKRGRTIGVPTANIALGDYMRPAYGVYATRSRLADGRVVNGVASLGVRP 247

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 P LLE ++FDF  ++YGQ        +LR E  F  +  LK  + +D   AR+I
Sbjct: 248 MYALETP-LLEVWLFDFDSDLYGQVIETELVAWLRGEESFDGLGALKAQIDKDADAARRI 306

Query: 309 LES 311
           L S
Sbjct: 307 LAS 309


>gi|15603526|ref|NP_246600.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12722067|gb|AAK03745.1| RibF [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 311

 Score =  191 bits (486), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 166/310 (53%), Gaps = 16/310 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
            +LP +L G  + IGNFDG+HLGH  IL    + A+  N P+ V+ F P PR      + 
Sbjct: 8   HNLPPNLSGCALTIGNFDGVHLGHQAILRHLRQKADALNLPVVVMLFEPQPREYFTGDAI 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     +   L +     ++  +F    A+ +AE+FI+  LV+ L V+ +  G  FR
Sbjct: 68  PARLMRLRDKLHYLAQAKVDYVLCIRFNENFASQTAEEFIEDWLVKKLNVRFLSIGDDFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           FG  R GD  +LQK GE +GF     H+   DELR      +SS+ IR AL +  +  A 
Sbjct: 128 FGAKRQGDFALLQKSGEAFGFFVEDNHSFCCDELR------ISSTAIREALAEDDLAYAE 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            +LG  + I   V HG K+GRT+GFPTAN+ L   +   +GVYA++ R ++Q  Y GVAN
Sbjct: 182 KMLGKPYRILGRVAHGNKLGRTIGFPTANIPLHRQVNPVKGVYAVKVRLKNQEIYHGVAN 241

Query: 244 FGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G+ PT+  NG + LLE  IFDF   IYGQ   V F   +R E KF   E LK  + +D 
Sbjct: 242 IGKRPTI--NGVVQLLEVHIFDFHSTIYGQCLEVEFCHKIRNEFKFPSFEALKEQIAQDV 299

Query: 303 KKARKILESS 312
           + A+    + 
Sbjct: 300 ETAKHFFRTQ 309


>gi|307251566|ref|ZP_07533473.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861030|gb|EFM93036.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 341

 Score =  191 bits (486), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 90  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 150 YLSVGDDFHFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|307260497|ref|ZP_07542191.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869809|gb|EFN01592.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 341

 Score =  191 bits (486), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 90  QANSTACITPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 150 YLSVGDDFHFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|163737795|ref|ZP_02145212.1| putative manganese-dependent inorganic pyrophosphatase [Phaeobacter
           gallaeciensis BS107]
 gi|163742899|ref|ZP_02150283.1| riboflavin biosynthesis protein RibF [Phaeobacter gallaeciensis
           2.10]
 gi|161383863|gb|EDQ08248.1| riboflavin biosynthesis protein RibF [Phaeobacter gallaeciensis
           2.10]
 gi|161389321|gb|EDQ13673.1| putative manganese-dependent inorganic pyrophosphatase [Phaeobacter
           gallaeciensis BS107]
          Length = 310

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +G V AIGNFDG+H GH  +++ A +    +P+ V++F PHPR      +  F L     
Sbjct: 15  RGAVAAIGNFDGVHRGHQSVIDLAREAEPQAPLGVMTFEPHPREFFAPDAKPFRLMSAEA 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   LEK+G   L +  F    +  + E F +KV+ + L ++ V+ G+ F FGK RAG  
Sbjct: 75  RASRLEKLGVERLYQLNFNAALSGLTPEAFARKVIADGLGLRHVVVGSDFCFGKGRAGTA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++ GE  GF  V I  L       VSS+ IR AL+ G   +AA++LG+   IE +VI
Sbjct: 135 EDLKRFGEDMGF-GVTIAPLMEYSEDTVSSTAIRRALSDGRPRDAANMLGHWHRIEGEVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVPNG 254
            GE+ GR LG+PTANM +        GVYA+     D   Q SY G A+ G  P    + 
Sbjct: 194 GGEQRGRELGYPTANMSIDGLHQPAFGVYAVLVDVLDGPHQGSYHGAASVGVRPMFDGSH 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E+F+FDF+  +YG   +V   +YLRPE+ F  ++ L   M  D  +AR +L +
Sbjct: 254 P-NIETFLFDFTGNLYGATLSVGLVEYLRPEMTFDGLDGLLAQMDADCTQARSLLAT 309


>gi|303250524|ref|ZP_07336721.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650512|gb|EFL80671.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 320

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 9   NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 68

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI+++LV+ L V+
Sbjct: 69  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIRELLVKQLRVR 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FG +R GD  +L+  G KY F  V   +  N+  Q VSSS IRTAL +  +
Sbjct: 129 YLSVGDDFHFGANRTGDFALLRNAGLKYRF-AVEDSQTLNHAEQRVSSSLIRTALQQDDL 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 188 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 247 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 305

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 306 KDREQA 311


>gi|165975503|ref|YP_001651096.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875604|gb|ABY68652.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 320

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG VV+IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 9   NLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 68

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI ++LV+ L+V+
Sbjct: 69  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISELLVKQLQVR 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  ++  Q VSSS IRTAL    +
Sbjct: 129 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLSHAEQRVSSSLIRTALQLDDL 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 188 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 247 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 305

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 306 KDREQA 311


>gi|163745708|ref|ZP_02153068.1| riboflavin biosynthesis protein RibF [Oceanibulbus indolifex
           HEL-45]
 gi|161382526|gb|EDQ06935.1| riboflavin biosynthesis protein RibF [Oceanibulbus indolifex
           HEL-45]
          Length = 310

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 160/303 (52%), Gaps = 7/303 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
            LP+  +G   AIGNFDG+HLGH  ++E A + A  +P+ V++F PHPR      +P F 
Sbjct: 11  DLPD--RGATAAIGNFDGVHLGHRSVIELAQRAAPEAPLGVVTFEPHPREYFAPDAPPFR 68

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L     +   LEK+G   L    F    A+ S E F + VL E L +  V+ G  F FGK
Sbjct: 69  LMGREARAHRLEKIGVERLYELAFNGTLASLSPEAFARDVLHEGLGLAHVVVGADFCFGK 128

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            RAG    L + G++YGF  V I  L       VSS+ IR AL+ G    AA +LG+   
Sbjct: 129 GRAGTADDLVRFGDQYGF-GVTIAPLMERDELTVSSTAIREALSGGETREAAAMLGHWHR 187

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNP 248
           I+  VI GE+ GR LGFPTANM +        GVYA+     +   + SY G A+ G  P
Sbjct: 188 IDGPVISGEQRGRELGFPTANMSIDGLHPPAFGVYAVLVDVLEGPHKGSYHGAASIGVRP 247

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
               N    LE+++FDF  ++YG   +V   ++LR E KF  +E L   M  D  +AR I
Sbjct: 248 MFGEN-KANLETYLFDFKGDLYGAPLSVGLVEHLRGEEKFDSLEALITQMDADCTRARAI 306

Query: 309 LES 311
           LE+
Sbjct: 307 LEA 309


>gi|209966830|ref|YP_002299745.1| riboflavin biosynthesis protein RibF [Rhodospirillum centenum SW]
 gi|209960296|gb|ACJ00933.1| riboflavin biosynthesis protein RibF [Rhodospirillum centenum SW]
          Length = 314

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 159/290 (54%), Gaps = 8/290 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
            L   L+G  VA+GNFDG+H GH  ++   Q    A      VL+F PHPR++ +   P 
Sbjct: 9   DLAPELRGCAVALGNFDGVHRGHRAVIAATQEKAAALGGATVVLTFEPHPRSLFRPGDPP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           F L+P  I+ +++E +G  AL    F    +  +AE+F++ VL++ L    V+ G  F F
Sbjct: 69  FRLTPFRIKARLIEALGVDALFVIHFDEAFSRRTAEEFVEHVLIQELGAAHVVAGYDFVF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +L++ GE+ GF    +  + +    + SS+ +R  L  G    A+ +LG+ 
Sbjct: 129 GHKRGGDMALLRRMGEERGFGVTEVRPVADAGGTVFSSTRVRELLQAGEPQAASGILGHP 188

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS----YSGVANFG 245
           F +E  V HG+K GRT+GFPTAN++L   +  + GVYA+     DQ      + GVAN G
Sbjct: 189 FELEGRVEHGDKRGRTIGFPTANVELGEYLRPRFGVYAV-LAGIDQGGGTVWHKGVANLG 247

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           R PT V      LE  +FDF  ++YG+   V    +LRPE+KF  ++ LK
Sbjct: 248 RRPT-VGGHVERLEVHLFDFDGDLYGRHLRVQLLHFLRPELKFDGLDALK 296


>gi|307249244|ref|ZP_07531241.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307262627|ref|ZP_07544257.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306858768|gb|EFM90827.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306872050|gb|EFN03764.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 341

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG VV+IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI ++LV+ L+V+
Sbjct: 90  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISELLVKQLQVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  ++  Q VSSS IRTAL    +
Sbjct: 150 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLSHAEQRVSSSLIRTALQLDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|58039698|ref|YP_191662.1| riboflavin kinase [Gluconobacter oxydans 621H]
 gi|58002112|gb|AAW61006.1| Riboflavin kinase [Gluconobacter oxydans 621H]
          Length = 307

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 162/301 (53%), Gaps = 1/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +++P   +  V A+GNFDG+H GH  +L+       + P++V++F+PHPRT+ +   P F
Sbjct: 8   RNIPAAARNTVAALGNFDGVHRGHVHLLDTLRMARPDHPLSVVTFDPHPRTLFRPQDPPF 67

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L  P ++   L + G   + +  F  E +  S+EQF+  VLV  L V  V  G  F FG
Sbjct: 68  RLMLPDVRAAALGEQGVDHVFQIPFDAEFSRLSSEQFVNDVLVNGLGVAHVACGADFAFG 127

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G+   L+     +G     + +L +    I SSS IR  L +G+   AA  LG  +
Sbjct: 128 HRRTGNIERLETLLAPHGIGLTIVPQLSDEGGPI-SSSRIRRLLQEGYPERAAQELGRPW 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG++ GR LGFPTAN+ L+  +    GVYA R    D     GVAN GR PT+
Sbjct: 187 SITGPVMHGDQRGRLLGFPTANIPLTQHVEPARGVYAARVTLPDGRVIPGVANIGRRPTI 246

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  LE  +FDF++++YGQ  +V+    LR E +F  +++LK  +  D  +AR IL 
Sbjct: 247 NDGQESRLEVHLFDFNEDLYGQILSVALIALLREEKRFSGLDELKTQIAADAAQARSILN 306

Query: 311 S 311
           +
Sbjct: 307 A 307


>gi|307256066|ref|ZP_07537854.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865488|gb|EFM97383.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 341

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 175/306 (57%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG V++IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 30  NLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 89

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI ++LV+ L+V+
Sbjct: 90  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISELLVKQLQVR 149

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  ++  Q VSSS IRTAL    +
Sbjct: 150 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLSHAEQRVSSSLIRTALQLDDL 208

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 209 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 267

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 268 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 326

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 327 KDREQA 332


>gi|313207188|ref|YP_004046365.1| riboflavin biosynthesis protein ribf [Riemerella anatipestifer DSM
           15868]
 gi|312446504|gb|ADQ82859.1| riboflavin biosynthesis protein RibF [Riemerella anatipestifer DSM
           15868]
 gi|315022410|gb|EFT35437.1| FMN adenylyltransferase [Riemerella anatipestifer RA-YM]
 gi|325335372|gb|ADZ11646.1| FAD synthase [Riemerella anatipestifer RA-GD]
          Length = 306

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 169/285 (59%), Gaps = 6/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            ++IG FDG+HLGH  I++   KI++   ++  +L+F PHPRTI   +  +  L+  + +
Sbjct: 17  ALSIGMFDGVHLGHQSIIKNLKKISDEKKLSSGLLTFWPHPRTIFNPNENLKLLNTLAEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ++E +G   L    F  +  N SA+ F++K+LV+ L VK +I G   RFGKD+ GD  
Sbjct: 77  TSLIENLGVDFLFLQNFDEDFRNLSADDFVKKILVDKLNVKHLIIGYDHRFGKDKKGDFN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK   ++ F    +D ++  ++Q +SS+ IR A+T G   +A  +LGY + +   VIH
Sbjct: 137 LLQKMATEFDFEVQQLDAIQ-LENQNISSTKIRNAITSGDFKSANDMLGYHYPLSGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+KIGRT+G+PTAN+ +    LL K+G Y +     D   Y G+ + G NPT V    L 
Sbjct: 196 GKKIGRTIGYPTANISIDNIKLLPKKGAYIVEVWI-DNLFYKGMLSVGTNPT-VSGTELS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +E +I DF+++IY Q  T+ F D+L  EIKF  +E L   + ED+
Sbjct: 254 IEVYILDFNKDIYDQDITIKFRDFLHEEIKFDGLEALIKKLDEDK 298


>gi|167623064|ref|YP_001673358.1| riboflavin biosynthesis protein RibF [Shewanella halifaxensis
           HAW-EB4]
 gi|167353086|gb|ABZ75699.1| riboflavin biosynthesis protein RibF [Shewanella halifaxensis
           HAW-EB4]
          Length = 311

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/311 (36%), Positives = 175/311 (56%), Gaps = 12/311 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI     LP H +G V++IGNFDG+H GH  ++ + +K A +   P  V++F P PR +
Sbjct: 8   HNI-----LPKH-RGCVLSIGNFDGVHRGHAEVINRLVKKAKHLGLPAVVMTFEPQPREL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            Q  +    LS    +  +L+++    L+   F  + ++++AE FI+ +LV+ L VK ++
Sbjct: 62  FQGENAPARLSLLRDKIVLLDELKIDRLLCVNFNNKFSSFTAEDFIELLLVKALGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R G+  +L+K GEK+GF  V          + VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGKQRQGNFEMLRKAGEKHGFAVVSTQSFILGDKR-VSSTEVRQLLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGKVAHGEKIGRTLGFPTANIALKRKVSPVRGVFAVKLYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  ++YG+   V     +R E  F  ++ LK  + +D
Sbjct: 241 NVGFRPTV--NGQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQIKDD 298

Query: 302 EKKARKILESS 312
             +A+ +L S 
Sbjct: 299 ANRAKALLGSD 309


>gi|332880027|ref|ZP_08447711.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332682023|gb|EGJ54936.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 308

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 172/296 (58%), Gaps = 7/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG FDG+HLGH  I+++ ++ A+ + +  TV +F PHPR I+Q    +  +   
Sbjct: 14  KPTVITIGTFDGVHLGHQKIIKRVVETAHKNGLLATVFTFFPHPRMIVQHDQQLKLIHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +++ L+ +G   LI   F    AN SAE F+ ++LV+ L  K VI G    FGK+R  
Sbjct: 74  AEKKQFLQSLGVDLLIVQPFNEAFANLSAEAFVFELLVKHLRAKKVIIGYDHHFGKNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   ++  GE+YGF    I  ++      VSS+ IR AL +G V  A H LG  ++    
Sbjct: 134 NIDNMRLFGEQYGFSVEEIS-VQEVDEVSVSSTKIRQALNEGKVEIAEHYLGVPYSFTGK 192

Query: 196 VIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG K+GRT+GFPTAN+Q+  S  ++ K+GVY +    + +  Y G+ + G+NPT+   
Sbjct: 193 VVHGLKLGRTIGFPTANLQVEASYKLIPKDGVYVVYSLIEGRKVY-GMMSIGKNPTIQGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           G   +E + FDF+Q++YGQ  T+ F  YLR E KF  +  LK  + +DE  ARK +
Sbjct: 252 GA-SIEVYFFDFNQDLYGQDLTIYFVKYLREERKFSSVSLLKKQIQDDEAAARKAI 306


>gi|144898685|emb|CAM75549.1| riboflavin biosynthesis protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 331

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 6/302 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           L+G VVA+GNFDG+H GH  ++  A +IA +  +   V++F PHPR     + P F L+P
Sbjct: 17  LQGCVVALGNFDGVHKGHQAVILTAKRIAQDLGVACGVMTFEPHPRAFFNPAQPPFRLTP 76

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             ++ +++E +G   L    F    A+ +A +F+  VL   L  + V+ G  + FGK R 
Sbjct: 77  FRVKARLIEALGIDLLFMQHFDQAFADMTALEFVGGVLATCLGARHVVVGYDYVFGKGRK 136

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G   +LQK  ++  F    +        +  SS+ +R AL  G    AA LLG+ + IE 
Sbjct: 137 GTGALLQKAADEGAFGFTAVPPEMAKGGETYSSTRVREALVAGQPSVAARLLGHYWEIEG 196

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---DQTSYSGVANFGRNPTMV 251
            V HG++ GRT+GFPTAN+ L        GVYA+R       D     GVANFG  PT  
Sbjct: 197 RVEHGDQRGRTIGFPTANIHLGEYQHPAAGVYAVRAGIDLGGDTQWLDGVANFGNRPTFD 256

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                +LE  + D + ++YG+   V+  D++RPE KF  +++LK  +  D ++AR IL +
Sbjct: 257 KQDQ-ILEVHLLDHNIDLYGRHLRVALVDFIRPERKFAGLDELKTQIAADAQQARAILAA 315

Query: 312 SY 313
            +
Sbjct: 316 RH 317


>gi|126736557|ref|ZP_01752297.1| riboflavin biosynthesis protein RibF [Roseobacter sp. CCS2]
 gi|126713870|gb|EBA10741.1| riboflavin biosynthesis protein RibF [Roseobacter sp. CCS2]
          Length = 313

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 159/297 (53%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIGNFDG+H+GH  +++   K A   N+P+ +++F PHPR+        F L   
Sbjct: 15  RGAAAAIGNFDGVHIGHQAVIDLTRKAAKAVNAPLGIMTFEPHPRSYFSRDPNPFRLMNA 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L K+G   L    F    A  S   F Q ++ + L +K V+ G  F FGK RAG
Sbjct: 75  EARANRLAKLGVEKLYEVPFNEALAGLSPRAFAQTIIADQLGLKHVVVGADFCFGKGRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               LQ  G + GF  V I  +    +  VSS+ IR ALT G   +AA +LG+   IE +
Sbjct: 135 TVDDLQTFGTEMGF-GVTIAPIVAIDTANVSSTAIRQALTDGKPRDAAAMLGHWHRIEGE 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVP 252
           VI G++ GR LG+PTANM +      K GVYA++    D   + +Y G A+ G  P    
Sbjct: 194 VIRGDQRGRDLGYPTANMSIMDLHPPKFGVYAVKVDMLDGPHKGTYDGAASIGVRPMFGE 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N P   E+FIFDF  ++YG   +V+  D+LRPE+KF D++ L   M  D   A++IL
Sbjct: 254 NIP-NCETFIFDFKGDLYGSTLSVALVDFLRPELKFGDLDALITQMDADCVSAKEIL 309


>gi|261854827|ref|YP_003262110.1| riboflavin biosynthesis protein RibF [Halothiobacillus neapolitanus
           c2]
 gi|261835296|gb|ACX95063.1| riboflavin biosynthesis protein RibF [Halothiobacillus neapolitanus
           c2]
          Length = 313

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/298 (38%), Positives = 162/298 (54%), Gaps = 5/298 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +LP    G VV +GNFDG+HLGH  +L QA   A     P+ VL F P PR      +P+
Sbjct: 9   ALPAFPDGCVVTLGNFDGVHLGHQAVLRQAADQAREFGLPLVVLIFEPLPREFFAPHAPV 68

Query: 70  FTLSPPSIQEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             L+    +   + ++G    L+ + F    A  +AE F+++VLV+ L  + ++ G  FR
Sbjct: 69  ARLTRLRERAAFIAELGVVDVLLVHPFNAAFAQSTAEAFVEQVLVDALHARRIVIGDDFR 128

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R GD  +L++ G+++ F +V          + VSS+ IR+ LT+  V  AA LLG 
Sbjct: 129 FGKNRQGDFALLEQLGQRFDF-SVQAAATWALDGERVSSTRIRSHLTERDVAGAARLLGR 187

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            FT+   VIHG+K GR LGFPTAN+ L   +    GV+A++    D    +GVAN G  P
Sbjct: 188 PFTLCGRVIHGDKRGRQLGFPTANVALHRRLSPLRGVFAVKTTLPDGAIVNGVANVGTRP 247

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T V      LE  +FDF ++IYGQ   V+F   LR E KF  +E L   +  D   AR
Sbjct: 248 T-VDGQDARLEVHLFDFDRDIYGQMVRVAFCHPLRDEQKFSSLEALMEQITRDASAAR 304


>gi|157374332|ref|YP_001472932.1| riboflavin biosynthesis protein RibF [Shewanella sediminis HAW-EB3]
 gi|157316706|gb|ABV35804.1| riboflavin biosynthesis protein RibF [Shewanella sediminis HAW-EB3]
          Length = 311

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 171/309 (55%), Gaps = 14/309 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTI 62
           HNI     LP H  G V+ IGNFDG+H GH  ++ + ++ A     P T+++F P P+ +
Sbjct: 8   HNI-----LPAH-HGCVLTIGNFDGVHRGHAEVISKLVQKARQLKVPATLMTFEPQPQEM 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +LE++G   L+   F  + A+  AE FI K+LVE L VK ++
Sbjct: 62  FRGENAPARLSILRDKIFLLEELGIDRLVCINFNAKFASLPAEDFIDKLLVESLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLN 181
            G  F FGK R G+  +L+  GE++ F  V     L  +K   VSS+ IR  L KG +  
Sbjct: 122 VGDDFCFGKQRKGNFNMLKSAGEQHSFAVVSTQSFLLGDKR--VSSTEIRDLLAKGKMEQ 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    +  +Y GV
Sbjct: 180 ARRLLGHPFTLCGKVAHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKLYWDNSDTYEGV 239

Query: 242 ANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           AN G  PT+  NG +  LE  +FDF  ++YG+   V     +R E  F+ +E LK  +  
Sbjct: 240 ANIGFRPTV--NGQVCQLEVHLFDFDGDLYGRTVEVELVAKIRDEQPFQSLEALKRQINN 297

Query: 301 DEKKARKIL 309
           D  KA+ +L
Sbjct: 298 DADKAKALL 306


>gi|190149314|ref|YP_001967839.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914445|gb|ACE60697.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 320

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 174/306 (56%), Gaps = 15/306 (4%)

Query: 12  SLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII--Q 64
           +L NH    KG VV+IGNFDG+HLGH  IL +    A   N P  V+ F P PR     +
Sbjct: 9   NLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQPREFFANK 68

Query: 65  SSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++    ++P  +       K LE+ G   ++  +F    AN SA+ FI ++LV+ L+V+
Sbjct: 69  QANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISELLVKQLQVR 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +L+  G KY F  V   +  ++  Q VSSS IR AL    +
Sbjct: 129 YLSVGDDFRFGANRTGDFALLRNAGLKYRF-AVEDSQTLSHAEQRVSSSLIRMALQLDDL 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           + A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +TQ    ++
Sbjct: 188 VLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQTQ-TGRHN 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D E LK  + 
Sbjct: 247 GIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDFEALKAQIE 305

Query: 300 EDEKKA 305
           +D ++A
Sbjct: 306 KDREQA 311


>gi|258406569|ref|YP_003199311.1| riboflavin biosynthesis protein RibF [Desulfohalobium retbaense DSM
           5692]
 gi|257798796|gb|ACV69733.1| riboflavin biosynthesis protein RibF [Desulfohalobium retbaense DSM
           5692]
          Length = 313

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 174/314 (55%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           MH+F ++   Q  P+  +G    IGNFDG+HLGH  +L + +  A NS  P   ++F+PH
Sbjct: 1   MHIFRSLTDIQ--PHVAQGSCATIGNFDGVHLGHQALLRRVMDSARNSRLPSVAVTFDPH 58

Query: 59  P-RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P R I+  + P  TL+   I+  I++K+G   L+   FT E A    EQF+   L++ L 
Sbjct: 59  PLRVILGKTPPFITLTDQKIE--IMDKLGLDYLLCLPFTREMAGMEPEQFVLTFLIKGLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K ++ G  + FGK R GD  +LQ+ G KYGF    I  ++ N   I SS+ IR  + +G
Sbjct: 117 LKHLVIGYDYAFGKKRRGDFSLLQELGTKYGFTAEQIGPVQKNGDTI-SSTRIRELVEQG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + +   V+ G  + GR LGFPTAN++L  ++  + GVYA+    Q Q 
Sbjct: 176 RVHEARPLLGRWYRVVGSVVEGRNRGGRLLGFPTANLKLIDELAPQPGVYAVWAEFQGQI 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  VAN G NPT   N  L +E  I DF+++IYG    V F + LR E KF  ++ L  
Sbjct: 236 -HKAVANIGYNPTF-GNDALSVEVHIMDFNKDIYGSELRVHFVERLRSERKFDSLDALME 293

Query: 297 YMGEDEKKARKILE 310
            + +D    R++L+
Sbjct: 294 QIYQDIASGRELLD 307


>gi|254447493|ref|ZP_05060959.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           HTCC5015]
 gi|198262836|gb|EDY87115.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           HTCC5015]
          Length = 321

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 164/303 (54%), Gaps = 15/303 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSSPIFTLSP 74
           KG V  IGNFDG+H GH  ++   +++A      P  V+SF P PR            SP
Sbjct: 25  KGCVATIGNFDGVHRGHQKVI-AGLQVAGARLGLPSVVISFEPLPREYFAGRQ-----SP 78

Query: 75  PSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           P +   +EK   L+++G +  +   F    A    E FIQ+VLVE L V+ ++ G  FRF
Sbjct: 79  PRLTRFREKAEQLDQLGVARFLCMPFDDGLAQQCPEDFIQQVLVEGLGVRYLVVGDDFRF 138

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+DRAGD  +L++ GE+YGF  +    +  +  +I SS+ IR  L +G +  AA LLG R
Sbjct: 139 GRDRAGDFALLKRAGERYGFEVIDTQTVTEDAKRI-SSTRIRELLERGDLDEAAELLGRR 197

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +   V HG+K GR +G+PTAN+ +       +G++ +R    ++    GVA+ G  PT
Sbjct: 198 YAMSGRVAHGDKRGRIMGYPTANIHIHRQKTPVQGIFVVRMHGLEEGPVDGVASLGVRPT 257

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +G  +LE  +FDF++ IYG+   V F   +R E KF  +E L   + +D + AR   
Sbjct: 258 FEGDGKAVLEVHLFDFARSIYGEHVQVEFLHKIRDEEKFDSMETLIAAIDDDARCARAWF 317

Query: 310 ESS 312
            S+
Sbjct: 318 ASA 320


>gi|103487839|ref|YP_617400.1| riboflavin biosynthesis protein RibF [Sphingopyxis alaskensis
           RB2256]
 gi|98977916|gb|ABF54067.1| FMN adenylyltransferase / riboflavin kinase [Sphingopyxis
           alaskensis RB2256]
          Length = 309

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+GGV+A+GNFDG H GH  ++ +A++ A +   P  V +F+PHP    +   P F L+ 
Sbjct: 14  LRGGVIALGNFDGFHAGHQAVVGRAVRHAKDEGRPAIVATFDPHPVRFFKPDVPPFRLTT 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              ++++    G  A++   F    A  SAE+FI  +L++      V+TG  F FGK R+
Sbjct: 74  LDQRQELFAAAGADAMLVLPFDAALAATSAEEFITGLLLDRYGAAGVVTGADFVFGKGRS 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   L     + GF T  +  + ++  +++SSS IR AL  G    AA LL   FT+  
Sbjct: 134 GNVVTLADHARRLGFFTEMVAPV-DDADEVISSSRIREALQAGDCATAARLLTRPFTVRG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V HG+K GR LGFPTAN+ +   +  + G+YA+  +  D     G AN G  P+  P  
Sbjct: 193 VVQHGDKNGRLLGFPTANIDMGNYLRPRYGIYAVTGKLPDGRVLKGAANLGIRPSFDPPK 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LLE   FDFS+++YG+   V+F  ++R E KF  ++ L   +  D + A+ +L
Sbjct: 253 E-LLEPHFFDFSEDLYGREIDVAFHAFIRAEAKFDSMDALMAQIAADCEAAKALL 306


>gi|307155165|ref|YP_003890549.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
 gi|306985393|gb|ADN17274.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
          Length = 325

 Score =  188 bits (478), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 169/310 (54%), Gaps = 23/310 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI---------KIANNSPI---TVLSFNPHPRTIIQSSSP 68
            +A+GNFDGIHLGH  ++             K     P+   TV++F+PHPR    S   
Sbjct: 16  AIALGNFDGIHLGHQQVISSIWTKSSSSLVQKSREQDPLLHSTVVTFDPHPREFF-SGQK 74

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+LE++G   L+   F  E A  S +QF++++LV+ L+   +  G  FR
Sbjct: 75  TQCLTPLPEKVKLLEQIGIKQLVLLPFDRELAALSPQQFVEQILVQKLQAARICVGEDFR 134

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLG 187
           FG  RAG    L+     +G   +       N  ++ +SSS IR AL  G++  A  +LG
Sbjct: 135 FGHQRAGGASELEALASPFGIEVIITGLQTCNSEELRISSSRIRQALADGNIEAAKGMLG 194

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQD-------QTSYS 239
             +++   +I G+++GR +GFPTAN+ L S  +L + GVY +R   +D       +TS++
Sbjct: 195 RPYSLTGTIIKGQQLGRKIGFPTANLDLPSHKLLPRYGVYCVRVEIEDDLTQDNPKTSFN 254

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GV N G  PT+   GP  +E  + D+S ++YG+  TVS   +LRPE KF  ++ LK  + 
Sbjct: 255 GVMNIGYRPTVQGEGP-TVEVHLLDWSGDLYGKSLTVSLEQFLRPETKFPSLDALKAQIT 313

Query: 300 EDEKKARKIL 309
           ED + ARKIL
Sbjct: 314 EDCQLARKIL 323


>gi|168333341|ref|ZP_02691625.1| riboflavin biosynthesis protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 303

 Score =  188 bits (478), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 163/285 (57%), Gaps = 5/285 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +V IGNFDG+HLGH  +   A++   +  +  LSF PHP T I S +    ++P   + +
Sbjct: 15  IVVIGNFDGVHLGHQKLFAAAVEAKGDMDVLALSFFPHP-TWILSGAKKEIITPTRDKIE 73

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +++ +G    + Y FTLE AN +A  F  K+L+E L+ K V+ G  +RFGK R      L
Sbjct: 74  VMKSLGVDIFVEYPFTLELANMNAYDFFDKILIEDLKAKVVVVGEDYRFGKARKAGIAEL 133

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +  EK G     + +L     + VSS+ IR  L +G V +A+ LLGY + I   VI G+
Sbjct: 134 AEMCEKKGVRLCVVKKLMLEGEK-VSSTQIRRYLAEGAVEDASKLLGYTYKIVGKVIKGK 192

Query: 201 KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           ++GRT+GF TAN+     +L  K GVYA + +  ++  +  + N G NPT V     ++E
Sbjct: 193 QLGRTIGFKTANISTKEGVLYPKNGVYATKVKVYNK-EFLAITNIGYNPT-VGGKVKMIE 250

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           S IFDF +EIY +   VSF  ++RPE KF ++  LK+ +  D++K
Sbjct: 251 SNIFDFEKEIYDEEIEVSFLKFIRPEKKFVNLNDLKMQIITDKEK 295


>gi|85375539|ref|YP_459601.1| riboflavin biosynthesis protein [Erythrobacter litoralis HTCC2594]
 gi|84788622|gb|ABC64804.1| riboflavin biosynthesis protein [Erythrobacter litoralis HTCC2594]
          Length = 315

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 165/303 (54%), Gaps = 7/303 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +P  L+G ++A+GNFDG H GH  +  +AI  A+    P  + +F+PHP    +  +P F
Sbjct: 10  VPESLRGAIIALGNFDGFHRGHQAVAGEAIDWAHAEGRPSIIATFDPHPVRFFRPDTPPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    ++++    G +A++ + F  E A+ SAE FI ++L++ L    V+TG  F FG
Sbjct: 70  RLTTLEQRQELYIAAGATAMLVFHFDKELASTSAEDFITEILIDRLGAHGVVTGGDFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           +   G+  +L+  G + G  +  ++ + +       ++SSS IR AL  G    A  LL 
Sbjct: 130 QGAKGNVDLLKSFGGERGLESRVVEPVEDAGLGNGGVISSSRIREALRDGDCATATELLS 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGVANFGR 246
             F I   V HG+K GR +G+PTAN+ +   +  + G+YA+  R        +G AN G 
Sbjct: 190 RPFAIRGVVEHGDKRGREIGYPTANLHIESYLRPRYGIYAVTGRILATGQELTGAANIGI 249

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            P   P    LLE + FDFS ++YGQ   VSF  +LRPE KF  +E L   M +D ++AR
Sbjct: 250 RPQFEPPKE-LLEPYFFDFSGDLYGQEIEVSFHHFLRPEAKFDSLEALMAQMEKDCERAR 308

Query: 307 KIL 309
           ++L
Sbjct: 309 ELL 311


>gi|89055856|ref|YP_511307.1| FMN adenylyltransferase / riboflavin kinase [Jannaschia sp. CCS1]
 gi|88865405|gb|ABD56282.1| FMN adenylyltransferase [Jannaschia sp. CCS1]
          Length = 307

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 153/287 (53%), Gaps = 13/287 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           KG  VAIGNFDG+H GH  +L  A ++  ++P+ V++F PHPR +    +P F L     
Sbjct: 15  KGASVAIGNFDGVHRGHQHVLNLAKRL--DAPLGVVTFEPHPREVFAPDAPPFRLMNAEA 72

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L K+G + L+   F    +  +   F++ VLV+ L +   + G  F +GK R G+ 
Sbjct: 73  RANRLRKLGVNLLVELPFDARLSGLTDAAFVRDVLVDSLGISHAVVGADFCYGKGRTGNA 132

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+  G    F     D L  +    VSS+ IR AL+ G   +AA +LG+   IE  V+
Sbjct: 133 STLRDMGAALDFDVTIADLLEGDGGA-VSSTAIRAALSDGRPGDAAEMLGHWHRIEGPVL 191

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMV--- 251
           HGEK GR LG+PTANM L    + + GVYA+    +D     +Y GVAN G  P      
Sbjct: 192 HGEKRGRELGYPTANMGLEGLHVPQPGVYAVTVEVRDGPHAGTYGGVANLGVRPMFELER 251

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           PN    LE+++FDFS ++YG   +V    YLR E +F  ++ L + M
Sbjct: 252 PN----LETYLFDFSGDLYGTHLSVGLVAYLRGEARFDSLDALIVQM 294


>gi|39996587|ref|NP_952538.1| riboflavin biosynthesis protein RibF [Geobacter sulfurreducens PCA]
 gi|39983468|gb|AAR34861.1| riboflavin biosynthesis protein RibF [Geobacter sulfurreducens PCA]
 gi|298505603|gb|ADI84326.1| riboflavin kinase and FAD synthetase [Geobacter sulfurreducens
           KN400]
          Length = 322

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 179/322 (55%), Gaps = 10/322 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F +I EI + LP+     VV IGNFDG+HLGH  I  +  + A   +    V++F P
Sbjct: 1   MKIFRSIDEIREPLPSP----VVTIGNFDGVHLGHREIFRRVKREAARLDGVSMVITFTP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++     +  ++  + +E ++E  G   L+   FT E A   AE+F+ ++LV  + 
Sbjct: 57  HPLKVLGLRKELRLINTYAEKELLIEASGIDCLLTIPFTAEFAAIGAERFVGEILVGRIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK ++ G  + FG++R GD  +L++ GE++GF    ++++ + ++ + SSS +R  +  G
Sbjct: 117 VKKLVIGYDYAFGRNREGDVAMLRRMGEEHGFEVEVLEQIASGET-VYSSSAVRRMIAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +V     L+G  +++   V+HG + G+ LGFPTAN++   +++   GVYA++ R  D T 
Sbjct: 176 NVREVVSLIGRHYSVGGTVVHGRRRGKDLGFPTANLRTEKELIPAAGVYAVKVRV-DDTI 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G  N G NPT   N  + +E  I DF  ++YG+   V F D +R E+++ D+  LK  
Sbjct: 235 RDGACNIGNNPTF-GNEEVTVEVHILDFDGDLYGKEIRVYFVDRVREELRYPDLNALKEG 293

Query: 298 MGEDEKKARKILESSYPLSERD 319
           +  D  + R++L     +  RD
Sbjct: 294 ISRDVARCRELLAGVSIIEYRD 315


>gi|332141928|ref|YP_004427666.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551950|gb|AEA98668.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 306

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 162/304 (53%), Gaps = 8/304 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           +N   P+H KG V+ IG FDG+H GH  +L   ++ A +   P TV+ F P P  +    
Sbjct: 7   LNNVKPHH-KGCVLTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQPEEVFMPD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +SP   + ++L + G   L+  +F  + A  SA+ F+  +LV+ L VK ++ G  
Sbjct: 66  KAPARISPLREKYELLRQQGVDRLLAVRFNAQFAQQSADTFVHDLLVDKLGVKFLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD  +LQ  GE+YGF  V       +  +I SS+ +R AL  G    A  +L
Sbjct: 126 FRFGHGRKGDFKMLQAAGEQYGFDVVSTHSFTMHAHRI-SSTAVREALADGDFGLATEML 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F I   V+HGEK GRT+GFPTAN+ L        GV+A+R    D   ++GVAN G 
Sbjct: 185 GRPFAIHGRVVHGEKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHFNGVANIGT 243

Query: 247 NPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG    LE  IFD S ++YG+  TV     +R EIKF   E LK  +  D  KA
Sbjct: 244 RPTL--NGVRNQLEVHIFDLSSDLYGKPITVFPMAKIRDEIKFASFEALKDQIQADATKA 301

Query: 306 RKIL 309
           R +L
Sbjct: 302 RLLL 305


>gi|197106621|ref|YP_002131998.1| riboflavin biosynthesis protein RibF [Phenylobacterium zucineum
           HLK1]
 gi|196480041|gb|ACG79569.1| riboflavin biosynthesis protein RibF [Phenylobacterium zucineum
           HLK1]
          Length = 315

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 156/305 (51%), Gaps = 2/305 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           ++LP   +G  VA+G+FDG+H GH  ++  A K A     P+ V++F+PHPR   +   P
Sbjct: 11  KTLPPADRGAAVAMGSFDGVHRGHQQVIALAAKAAGALKAPLGVITFDPHPRVYFRPDEP 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L  P  Q + LE +G   L       E A  +  +F ++VL   +  + V  G    
Sbjct: 71  AFRLMKPDQQARALEALGVDMLYVLPMDAEVAGMTDREFAEQVLHRGIGARHVAVGFDNS 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G    ++  GE+ GF     D + +   +  SS+++R AL  G    AA +LG 
Sbjct: 131 FGKGRTGSPATMRVYGEEMGFGVSVADPVGDGDGRKFSSTDVRDALRDGRPEIAAEILGR 190

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F IE  V  G ++GR LGFPTAN+ L   +  + GVYA R R  D     GVAN G NP
Sbjct: 191 PFAIEGPVQRGRQLGRKLGFPTANVALDDYVTPRFGVYATRTRLPDGREVPGVANIGINP 250

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+      LLE ++FDF +++Y Q        +LRPE KF  +E +   +  D K AR +
Sbjct: 251 TVDGITRPLLEVWLFDFDEDLYDQVIETDLITFLRPEEKFPSLEVMTRQVMADAKAARAL 310

Query: 309 LESSY 313
           L   +
Sbjct: 311 LMPDF 315


>gi|163857124|ref|YP_001631423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           petrii DSM 12804]
 gi|163260852|emb|CAP43154.1| riboflavin biosynthesis protein [Bordetella petrii]
          Length = 321

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/293 (35%), Positives = 159/293 (54%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            + IGNFDG+H GH  IL +  + A    +  TV++F PHPR    + +    L+P  I 
Sbjct: 21  ALTIGNFDGVHRGHQAILARVRQAARERGLLPTVMTFEPHPREYFAALNQRPELAPTRIS 80

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L   G + ++  +F    A  SA  FI+ +LV  L+ + ++ G  FRFG+ R
Sbjct: 81  GLRDKLEALACQGMAQVVIERFNARLAEMSANAFIEDLLVARLQTRWLLVGEDFRFGRKR 140

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +GD  +L++ G  +GF    + ++ +     VSSS +RTAL  G +  A  LLG  + I 
Sbjct: 141 SGDIDLLREAGMMHGFEVQTLADITDRHGHRVSSSEVRTALAVGDLARAQDLLGRPYQIS 200

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             VIHG+K+GRTLGFPT N++++P    + G+Y +R           VA+ G  PT+  +
Sbjct: 201 GHVIHGQKLGRTLGFPTLNLRVAPRCAARSGIYVVRAHGLGAQPRPAVASLGVRPTVEDH 260

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           G +LLE+ + D   + YG+   V F   LR E KF D+  L   + ED + AR
Sbjct: 261 GRVLLEAHLLDGPADAYGKLVRVEFLHKLRDEEKFPDLPSLTAAIAEDARNAR 313


>gi|302383346|ref|YP_003819169.1| riboflavin biosynthesis protein RibF [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193974|gb|ADL01546.1| riboflavin biosynthesis protein RibF [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 315

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 3/288 (1%)

Query: 24  IGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+H GH  ++  A + A+    P+ V+SF+PHPR   Q  +  F L  P    + 
Sbjct: 23  LGAFDGVHRGHQAVIASARQAADRLQCPLAVVSFDPHPRRWFQPDAAPFRLMTPGQMARA 82

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G + L    F  E A  +   F ++VL E L +K    G  F +GK R G    L 
Sbjct: 83  LEPLGVARLHLLPFDAEMAAMTDTAFARRVLCEGLGLKHAAVGFDFTYGKGRTGSPDALA 142

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K G   GF     + + +     +SSS +R AL  G +  AA +LG  F IE +V+HGEK
Sbjct: 143 KAGADLGFSVSVTNRIDDIGGLKLSSSAVREALHAGDMARAAAILGRPFAIEGEVVHGEK 202

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            GRT+G PTAN++L   +    GVYA R R  D     GVAN G  P      P LLE +
Sbjct: 203 RGRTIGVPTANVRLGDYMRPAYGVYATRTRLPDGRVIDGVANLGVRPMFEIVEP-LLEVW 261

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +FDF++E+YGQ         LR E+ F  ++ LK  +  D   AR +L
Sbjct: 262 LFDFAEELYGQVVETELVALLRGEMNFDGLDALKTQIDSDAGMARIVL 309


>gi|257465709|ref|ZP_05630080.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
 gi|257451369|gb|EEV25412.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
          Length = 321

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/308 (38%), Positives = 176/308 (57%), Gaps = 18/308 (5%)

Query: 11  QSLPNH---LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
            SL NH    +G  ++IGNFDG+HLGH  IL +  + A   N P  V+ F P PR     
Sbjct: 8   HSLANHSVFQQGCALSIGNFDGVHLGHQNILARLNEKAKTLNLPSVVMVFEPQPREFFAK 67

Query: 66  SSPIFTLSPPS----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            S   T +PP+    +++K+  LEK G   ++  +F+ + A  +A +FI+K+LVE L V+
Sbjct: 68  KSGNSTANPPARLMRLRDKLKYLEKAGVDFVLCVRFSAQFAKLTANEFIEKLLVERLNVR 127

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKG 177
            +  G  F FG DR+G+   L   G+  GF    ++E   +    + +SSS IR AL+K 
Sbjct: 128 YLSVGDDFHFGSDRSGNYQTLLNAGKTLGFE---VEESHTHSFGRERISSSLIRDALSKD 184

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++  T+    
Sbjct: 185 ELTLAAKLLGKPYSIGGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVYAVKIETKCGI- 243

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG+AN G  PT+    P LLE  I +F++ IYG+   VSF   +R E+KF   E L+  
Sbjct: 244 YSGIANVGNRPTINGTKP-LLEVHILNFNRSIYGEAVEVSFLKKIRNEVKFPSFEALREQ 302

Query: 298 MGEDEKKA 305
           + +D ++A
Sbjct: 303 IEKDRQQA 310


>gi|172035873|ref|YP_001802374.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
 gi|171697327|gb|ACB50308.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
          Length = 308

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 169/309 (54%), Gaps = 6/309 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           N+ +  S  N +    +A+GNFDGIHLGH  +L+  +++      T+++F PHP+     
Sbjct: 2   NVWVTSSTSNVITPTAIALGNFDGIHLGHRQVLKPILELQKQYTPTIVTFTPHPQEFFSG 61

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    L+P + + K+LE +    L+R  F    A+ S + F++ +LV+ L  K +  G 
Sbjct: 62  QTRQL-LTPLTEKVKLLESLNVKQLVRLPFDRSLASLSPQAFVEDILVKQLNAKYISVGE 120

Query: 126 KFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNA 182
            FRFGK RAG+  ILQ+  +++G   H   +    N    + +SSS IR  L  G+V  A
Sbjct: 121 DFRFGKGRAGNAQILQELAQQFGVFVHITKLQTCLNKDDPLRISSSRIRQCLATGNVRQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGV 241
             +LGY +++E  V+ G+++GRT+GFPTAN+Q+  D LL + GVY +R     +    GV
Sbjct: 181 KEMLGYSYSLEGIVVKGQQVGRTIGFPTANLQVPLDKLLPRRGVYCVRALLTTEEVVKGV 240

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PT+    P  +E  + D+S  +Y     V    +LR E KF  ++ LK  + +D
Sbjct: 241 INIGSRPTVNGQVP-TVEVHLLDWSGNLYRTFVKVQLDKFLRSEQKFPSLDALKNQIKQD 299

Query: 302 EKKARKILE 310
              AR+ILE
Sbjct: 300 CIIARQILE 308


>gi|68166020|gb|AAY87944.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|68166022|gb|AAY87945.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|68166024|gb|AAY87946.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|75914666|gb|ABA29750.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + +MG   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTEMGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|119946878|ref|YP_944558.1| bifunctional riboflavin kinase and FMN adenylyltransferase
           [Psychromonas ingrahamii 37]
 gi|119865482|gb|ABM04959.1| riboflavin kinase / FMN adenylyltransferase [Psychromonas
           ingrahamii 37]
          Length = 310

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 170/305 (55%), Gaps = 10/305 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+ +       +G V++IGNFDG+HLGH  +L + +  A     P TVL+F P P  +
Sbjct: 8   HNIKASH------QGCVLSIGNFDGVHLGHKAVLSRLLFEAKRLKVPATVLTFEPQPAEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +   L+++G   L+   F  + AN SA++FI+++L++ L VK ++
Sbjct: 62  FSGENAPARLSRLRDKFVQLDQLGLDRLLCVSFNRKFANLSAQEFIEELLIKKLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG  R GD  +L+K GEKYGF  V    L   + +I SSS IR AL  G +  A
Sbjct: 122 IGDDFHFGYQRKGDFELLKKAGEKYGFEVVDTHSLTQQEYRI-SSSRIRAALAAGDMRQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG +++I   V+HG K+GRT+G PTAN+ L   +    GV+ +         Y GVA
Sbjct: 181 ALMLGRKYSITGRVVHGRKLGRTIGVPTANLLLKRRVSPVSGVFVVSVLGIGNQIYQGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G+ PT V      LE  IF+F+  +YG +  V   + +R E++F    +LKI + +D 
Sbjct: 241 NIGQRPT-VQGVRQQLEVHIFNFNANLYGLQLEVVLEEKIRDEVRFDSFAELKIQIDKDI 299

Query: 303 KKARK 307
           K+AR+
Sbjct: 300 KQARQ 304


>gi|84515120|ref|ZP_01002483.1| riboflavin biosynthesis protein RibF [Loktanella vestfoldensis
           SKA53]
 gi|84511279|gb|EAQ07733.1| riboflavin biosynthesis protein RibF [Loktanella vestfoldensis
           SKA53]
          Length = 313

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/297 (37%), Positives = 161/297 (54%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIGNFDG+H+GH  +++  +A   A  +P+ +++F PHPR+     +  F L   
Sbjct: 15  RGAAAAIGNFDGVHIGHRAVIDIARAAADAAKAPLGIMTFEPHPRSYFARDTGPFRLMNA 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L K+G   L    F    AN +   F QK++ + L +  V+ G  F FGKDR G
Sbjct: 75  EARANRLAKLGIEKLYEVPFNTALANLTPRDFAQKIIRDQLGLVHVVVGADFCFGKDRKG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               LQ  G + GF  V I  +       +SS+ IR ALT G   +AA +LG+   IE  
Sbjct: 135 TVADLQAFGAEMGF-GVTIAPIIAIAGANISSTAIRAALTDGRPRDAAAMLGHWHRIEGA 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVP 252
           VI G++ GR LG+PTANM +S     K GVYA++    +   + +YSG A+ G  P    
Sbjct: 194 VIRGDQRGRELGYPTANMSISGLHPPKFGVYAVKIDVLEGAFKGTYSGAASIGVRPMFGE 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N P   E+FIFDF  ++YG   +V+  D+LRPE+KF  ++ L   MG D  +AR IL
Sbjct: 254 NVP-NCETFIFDFKGDLYGTHLSVALVDFLRPELKFDSLDALITQMGADCAQARDIL 309


>gi|308048499|ref|YP_003912065.1| FMN adenylyltransferase ;riboflavin kinase [Ferrimonas balearica
           DSM 9799]
 gi|307630689|gb|ADN74991.1| FMN adenylyltransferase ;riboflavin kinase [Ferrimonas balearica
           DSM 9799]
          Length = 315

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 165/301 (54%), Gaps = 4/301 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSP 68
            +L +  +  V+ IGNFDG+H GH  ++ + + +A     P TV+ F P P+   +  + 
Sbjct: 8   HNLADRHRDCVLTIGNFDGVHRGHAAVINRLVSLARQYGVPATVMVFEPQPQEYFRGEAA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    +   L ++G   ++  +F    A + AE F+Q++LV+ L ++ ++ G  F 
Sbjct: 68  PARLNLLRDKLDRLAELGVDRVLCVRFDARFAGWEAEDFVQQLLVDKLAIRYLVVGDDFC 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG+ R G+   LQ  G K+GF        R  + +I SS+ IR AL  G + +A  +LG+
Sbjct: 128 FGRARRGNFAFLQAAGAKHGFAVEDTASCRLGQERI-SSTLIRNALASGELASAERMLGH 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + I   V HG+K+GRT+GFPTAN+ L   ++   GV+A+R +T+D   + GVAN GR P
Sbjct: 187 PYQISGRVAHGDKLGRTIGFPTANILLKRTVVPISGVFAVRVQTEDGQWHDGVANVGRRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE  +FDF+ ++YGQ   V    +LR E  F  +E LK  +  D ++A+  
Sbjct: 247 T-VSGQQCRLEVHLFDFNADLYGQHLHVRLHSWLRDEHAFPSLEALKAQIRLDAERAQTA 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|261868575|ref|YP_003256497.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413907|gb|ACX83278.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 308

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 169/308 (54%), Gaps = 16/308 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +LP +L    + IGNFDG+HLGH  IL    + A+  + P+ V+ F P PR         
Sbjct: 9   NLPQNLHACALTIGNFDGVHLGHQAILRHLREKADELHLPMVVMLFEPQPREYFCGEDAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +   LE+ G   +I  KF    A   A+QFI+  LV  L+VK +  G  F+F
Sbjct: 69  ARLMHLRDKLHYLEQAGVDIVIVAKFDRTFAALPAQQFIEDWLVRKLKVKFLSIGDDFKF 128

Query: 130 GKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           G  R G+  +LQ+ GE++GF      +  +DELR      +SS+ IR AL    +  A  
Sbjct: 129 GAKRQGNFAMLQQAGEQFGFTVEDNRSFCLDELR------ISSTAIRLALANDDLPLAEK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + I   VIHG ++GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN 
Sbjct: 183 LLGHPYRILGRVIHGNELGRTIGFPTANIRLHRQVNPVKGVYAVKVRLKSGAFFNGVANI 242

Query: 245 GRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G  PT+  NG   LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  + +D +
Sbjct: 243 GTRPTI--NGVNQLLEAHLFDFQGDLYGQWLEVELCHKIRNEMKFPSFDTLKAQIAQDVE 300

Query: 304 KARKILES 311
            A+K+ E+
Sbjct: 301 TAKKVFEA 308


>gi|256425475|ref|YP_003126128.1| riboflavin biosynthesis protein RibF [Chitinophaga pinensis DSM
           2588]
 gi|256040383|gb|ACU63927.1| riboflavin biosynthesis protein RibF [Chitinophaga pinensis DSM
           2588]
          Length = 311

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 171/303 (56%), Gaps = 12/303 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+  V+ IG FDG+H GH  I++Q      A +    +++F+PHPR ++Q   P   L  
Sbjct: 13  LRQAVITIGTFDGVHSGHRYIIQQLQETAAACDGETVIITFDPHPREVLQPGGPPVKLLT 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            ++ EKI  L K G   L+   FT E +  SA+ ++++ L+E     T+I G   RFG +
Sbjct: 73  -TLDEKIELLSKEGIDHLVIVPFTREFSELSAQAYLEEFLIEQFNPHTIIIGYDHRFGHN 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G   +L+    +YGF  + I + +      VSS+ IR +L +G++  A  LLGY + +
Sbjct: 132 REGGLELLEAEQNRYGFRLIEIPQ-QVVHDLAVSSTKIRKSLQEGNIQLANELLGYPYFV 190

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPT 249
           E  VIHG+K+GR LGFPTAN+ +S    ++  EG+YAIR     Q T  +GV + G  PT
Sbjct: 191 EGTVIHGDKMGRQLGFPTANIAVSDVRKLIPVEGIYAIRVYLDKQSTPLNGVMSIGTRPT 250

Query: 250 MVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              NG  L +E+ IFDFS+EIY +   V    Y+R   KF +I+ L   M +D ++AR +
Sbjct: 251 F--NGADLRVEAHIFDFSEEIYDKVIRVELISYIRANQKFDNIDALVAQMHKDSQEARTV 308

Query: 309 LES 311
           L S
Sbjct: 309 LAS 311


>gi|332291638|ref|YP_004430247.1| riboflavin biosynthesis protein RibF [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169724|gb|AEE18979.1| riboflavin biosynthesis protein RibF [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 309

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 169/298 (56%), Gaps = 11/298 (3%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTL 72
           N  KG VV IG FDG+HLGH  I+ +  + A  N+    VL+F PHPR ++Q  + +  +
Sbjct: 11  NSEKGTVVTIGTFDGVHLGHRQIINRLNESARANDWESCVLTFFPHPRMVLQKDTSLKLI 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + ++LE +G   L+ + FTL+ + Y AE F++++LV  L  K VI G   RFG++
Sbjct: 71  NTIDERARLLEGLGLDHLVIHPFTLDFSRYHAETFVEEILVNSLNAKKVIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R  +   L++ GE+ GF    ++E+   + +   VSS+ +R +L  G V  A   L   F
Sbjct: 131 RNANIEDLKRFGEQLGFE---VEEISKQELEDVAVSSTKVRKSLEAGDVALANSYLDQAF 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNP 248
            +   V+ G  +GRT+G+PTAN++++ D  L   +G Y ++ R   +  Y G+ N G NP
Sbjct: 188 MLTGTVVKGRSLGRTIGYPTANLEIAEDYKLIPAQGAYVVQSRINGKIVY-GMMNIGTNP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T V      +E++ FDFS+++YGQ   +   D +R E  F  +++L   M EDEK AR
Sbjct: 247 T-VGGSAQTIETYFFDFSKDLYGQELEIQLLDRIRDEKTFASVDELVKAMKEDEKYAR 303


>gi|300777876|ref|ZP_07087734.1| possible FAD synthetase [Chryseobacterium gleum ATCC 35910]
 gi|300503386|gb|EFK34526.1| possible FAD synthetase [Chryseobacterium gleum ATCC 35910]
          Length = 306

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 174/286 (60%), Gaps = 6/286 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +++G FDG+HLGH  I+++  +I   NN    +L+F PHPR +   +  +  L+    +
Sbjct: 17  ALSLGMFDGVHLGHKSIIDELTQIGTENNLETAILTFWPHPRFVFNPNEDLKLLNTLEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++++EK G   L   +F  E  N + E+F++++LV+ L VK +I G    FGK+++G+  
Sbjct: 77  KQLVEKYGIDNLFLKEFDEEFRNLTGEEFVRQILVDKLNVKYLIIGYDHSFGKNKSGNFE 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK  ++ GF    ++ +  +++ I SS+ +R AL  G++  A  +LGY +++   V+H
Sbjct: 137 LLQKLSKELGFEVEQMEAINIHENNI-SSTKVRNALLAGNIQEANEMLGYSYSVSGTVVH 195

Query: 199 GEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+KIGRT+G+PTAN+   S  +L K+G Y +    +    Y G+ + G NPT V    L 
Sbjct: 196 GKKIGRTIGYPTANIDTESIKLLPKKGAYIVEVFVKG-NQYKGMLSIGTNPT-VNGEKLT 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           +E +I DF ++IY ++ TVSF D+L  EIKF+ ++KL   + ED+K
Sbjct: 254 VEVYILDFDEDIYDEKITVSFRDFLHDEIKFEGLDKLIERLDEDKK 299


>gi|33592822|ref|NP_880466.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           pertussis Tohama I]
 gi|33572470|emb|CAE42040.1| riboflavin biosynthesis protein [Bordetella pertussis Tohama I]
 gi|332382235|gb|AEE67082.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           pertussis CS]
          Length = 321

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 160/300 (53%), Gaps = 7/300 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P+      + IGNFDG+HLGH  IL +  + A    +   V++F PHPR    + +    
Sbjct: 14  PSQRTPCALTIGNFDGVHLGHQAILARVRQEARARGLVPAVMTFEPHPREYFATLNRRPE 73

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  L   G   ++  +F    A  SA  FI+ +LV  L+ + ++ G  
Sbjct: 74  LAPTRISGLRDKLQALAAAGIEQVVVERFDARLAEMSANAFIEDLLVAGLQTRWLLVGED 133

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FR+G  R+GD  +L++ G  +GF    + ++ + +   +SSS +RTAL  G +  AA LL
Sbjct: 134 FRYGHKRSGDIDLLREAGLTHGFEVCTLADITDRQGHRISSSEVRTALAVGDLDRAAQLL 193

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F I   VIHG+K+GR LGFPT N++++P    + G+Y +R           VA+ G 
Sbjct: 194 GQPFHISGHVIHGQKLGRELGFPTMNLRVAPRCATRSGIYVVRVLGLQDRPLPAVASLGV 253

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+   G +LLE+ + D S + YG+   V F   LR E KF D+  L   + +D + AR
Sbjct: 254 RPTVEDRGRVLLEAHLLDESLDAYGKLVRVEFLHKLRDEEKFADLPSLTAAIAQDAQNAR 313


>gi|149185344|ref|ZP_01863661.1| riboflavin biosynthesis protein [Erythrobacter sp. SD-21]
 gi|148831455|gb|EDL49889.1| riboflavin biosynthesis protein [Erythrobacter sp. SD-21]
          Length = 313

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 164/302 (54%), Gaps = 5/302 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           LP  L+G ++A+GNFDG HLGH  + ++AI  A     P  + +F+PHP    +  +  F
Sbjct: 10  LPESLRGAIIALGNFDGFHLGHQAVAKEAIDWARAEGRPAIIATFDPHPVRFFKPDAAPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    ++++    G +A++ + F  E A  +AE F++ +L E L  K V+TG  F FG
Sbjct: 70  RLTTLEQRQELYLAAGATAMLVFHFDGELAGTTAEDFVRVLLAEKLGAKGVVTGGDFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G+   L + G++ G     +D + +  +  VSSS +R AL +G+   AA LL   F
Sbjct: 130 KARGGNFERLVELGKEVGIEARAVDPVMDGGAP-VSSSRVRDALREGNPQEAARLLTRPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGVANFGRNPT 249
            I   V HG+K GR +G+PTAN+ +   +  K G+YA+  R         G AN G  P 
Sbjct: 189 AIRGVVQHGDKRGREIGYPTANLSIEHYLRPKYGIYAVTGRILSTGQELKGAANIGVRPQ 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             P    LLE + FDFS ++YGQ   V+F  +LR E KF  +++L   M +D   AR +L
Sbjct: 249 FEPPKE-LLEPYFFDFSGDLYGQEVEVAFHHFLRGEAKFDHLDELTAQMEKDCSDARHLL 307

Query: 310 ES 311
            +
Sbjct: 308 SA 309


>gi|242280393|ref|YP_002992522.1| riboflavin biosynthesis protein RibF [Desulfovibrio salexigens DSM
           2638]
 gi|242123287|gb|ACS80983.1| riboflavin biosynthesis protein RibF [Desulfovibrio salexigens DSM
           2638]
          Length = 327

 Score =  185 bits (470), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/305 (38%), Positives = 179/305 (58%), Gaps = 12/305 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIF-TLS 73
           +G  V IGNFDG+H GH  ++    K A  N     V++F+PHP R ++ S +P F TL+
Sbjct: 15  QGACVTIGNFDGVHKGHQKLISSTCKKARANGLASVVVTFDPHPLRVLVNSKTPPFITLT 74

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              ++   L K     ++   FT E A  S E+FIQ+ L+E L +K ++ G  +  GK R
Sbjct: 75  SQKLELIALHKPDI--ILALNFTKEMAALSPEEFIQRYLIEPLGMKEMVVGYDYALGKGR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G+   + K G+K+ +    +D +  N + +VSSS IR  +++G+V +   LLG  + + 
Sbjct: 133 SGNYETIVKLGQKHEYGVERLDPVIINDA-VVSSSRIRDMVSEGNVWDVRPLLGRFYQVR 191

Query: 194 SDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            +V+HG  + GR LGFPTAN++L  ++  K+GVYAIR   + +    GVAN G+NPT   
Sbjct: 192 GEVVHGMNRGGRLLGFPTANIKLEDELFPKKGVYAIRVEVEGKV-LPGVANIGKNPTF-G 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           N  L +E+ I DFS++IYG+   V F   +R E KF  +++LK  +G D   AR+IL  S
Sbjct: 250 NEALSVEAHILDFSKDIYGKDIRVHFIQRIRSEKKFNGLDELKERIGIDIGLAREIL--S 307

Query: 313 YPLSE 317
           YP S+
Sbjct: 308 YPESQ 312


>gi|127512031|ref|YP_001093228.1| riboflavin biosynthesis protein RibF [Shewanella loihica PV-4]
 gi|126637326|gb|ABO22969.1| riboflavin kinase / FMN adenylyltransferase [Shewanella loihica
           PV-4]
          Length = 311

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/313 (36%), Positives = 172/313 (54%), Gaps = 22/313 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           HNI     LP H +G V+ IGNFDG+H GH  ++   +K A  +  P T+++F P P+ +
Sbjct: 8   HNI-----LPRH-QGCVLTIGNFDGVHRGHAEVIAALVKKAKQHGVPATLMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +L+++G   L+   F  + A   AE FI+ +LV+ L VK ++
Sbjct: 62  FKGDNAPARLSLLRDKIVLLDELGIDRLLCVNFNQKFAAMPAEAFIEDLLVKQLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +L+  GEKYGF     H+  + + R      VSS+ IR  L KG
Sbjct: 122 VGDDFCFGKQRRGNFEMLKAAGEKYGFAVVNTHSFILGDKR------VSSTEIRGLLAKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           ++  A  LLG+ + +   V HGEKIGRT+GFPTAN+ L   +    GV+A++        
Sbjct: 176 NLEQARRLLGHPYALSGKVAHGEKIGRTIGFPTANIALKRKVSPVRGVFAVKLYWDGSDI 235

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GVAN G  PT+  NG    LE  +FDF  ++YG+   V     +R E  FK ++ LK+
Sbjct: 236 YEGVANVGFRPTV--NGQNCQLEVHLFDFEGDLYGRTVEVELVAKIRDEQPFKSLDALKL 293

Query: 297 YMGEDEKKARKIL 309
            + +D  +A+ +L
Sbjct: 294 QIKDDADRAKALL 306


>gi|68166030|gb|AAY87949.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|313633392|gb|EFS00230.1| riboflavin biosynthesis protein RibF [Listeria seeligeri FSL
           N1-067]
          Length = 314

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|218440941|ref|YP_002379270.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7424]
 gi|218173669|gb|ACK72402.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7424]
          Length = 338

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 172/323 (53%), Gaps = 36/323 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQ------AIKIANNSPI------------TVLSFNPHPRTI 62
            +A+GNFDGIHLGH  ++         +     SP+            TV++FNPHPR  
Sbjct: 16  AIALGNFDGIHLGHQKVISSIWTHSSLVAPPERSPVKDPKKIYSDCYSTVVTFNPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
             S      L+P + +  +LE++G   LI   F  + A+ S + F++++LVE L+ + V 
Sbjct: 76  F-SGQKKQCLTPLAEKILLLEQLGVEQLILLPFDQKLASLSPQAFVEEILVEKLQGRRVS 134

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------VSSSNIRTALT 175
            G  FRFG  R G    L+    ++G   VFI  L+ N S         +SSS IR AL 
Sbjct: 135 VGADFRFGCQRTGGAEDLKAIASQFGIE-VFITSLKTNFSADDPSENLRISSSRIRQALA 193

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIR----- 229
           +G + +A  +LG  +T+   V+ G+K+GRTLGFPTAN++L  D LL   GVYA+R     
Sbjct: 194 EGKIEDANQMLGRPYTLTGTVVTGQKLGRTLGFPTANLELPQDKLLPRFGVYAVRVEIKE 253

Query: 230 --FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
               T  +T + GV N G  PT+    P  +E  + D+S ++YGQ   VS   ++R E K
Sbjct: 254 HLLDTDSKTGFQGVINIGCRPTVAGESP-TVEVHLLDWSGDLYGQCLIVSLEQFIRSEAK 312

Query: 288 FKDIEKLKIYMGEDEKKARKILE 310
           F  ++ LK  +G D + ARKIL+
Sbjct: 313 FPSLDALKAQIGADCELARKILQ 335


>gi|296284865|ref|ZP_06862863.1| riboflavin biosynthesis protein [Citromicrobium bathyomarinum
           JL354]
          Length = 291

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 155/291 (53%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+GNFDG H GH  +  +AI+ A     P+ V +F+PHP    +  +P F L+    + 
Sbjct: 1   MALGNFDGFHKGHQAVAGEAIRWAREEERPVIVATFDPHPVQFFRPDTPPFRLTSLEQRH 60

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++    G +A++ + F  E A  SAE FI+ +LVE      V+TG  F FGK   G+  +
Sbjct: 61  ELYLAFGATAMLVFHFDAELAGTSAEDFIEHILVERFGAHGVLTGEDFTFGKGAKGNAAL 120

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G K+G     +  + +  + +VSSS IR  L  G    AA LL   F I   V HG
Sbjct: 121 LKEHGTKHGLEARTVSAVSDGDA-VVSSSRIRDLLKAGEPQAAAQLLTRPFAIRGIVEHG 179

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNGPLLL 258
           +K GRT+G+PTAN+ L   +  K G+YA+  R         G AN G  P   P    LL
Sbjct: 180 DKRGRTIGYPTANLALEDYLRPKYGIYAVTGRILSSGEELQGAANVGIRPQFEP-AKELL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E + FDFS ++YGQ   V+   ++RPE KF  ++ L   M  D  +AR++L
Sbjct: 239 EPYFFDFSGDLYGQEIEVALHHFIRPEAKFDGLDALIAQMDRDCAEARRLL 289


>gi|313638083|gb|EFS03352.1| riboflavin biosynthesis protein RibF [Listeria seeligeri FSL
           S4-171]
          Length = 314

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEE 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|24375037|ref|NP_719080.1| riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1]
 gi|24349780|gb|AAN56524.1|AE015789_11 riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1]
          Length = 311

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/307 (37%), Positives = 172/307 (56%), Gaps = 12/307 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L +K ++
Sbjct: 62  FRGENAPARLSLLRDKIVLLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGIKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R GD  +L++ G +YGF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGKGRKGDFDMLKQAGTRYGF-TVVSTQSFIVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++   +D   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWEDSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  + DF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQICQLEVHLLDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298

Query: 302 EKKARKI 308
             +AR +
Sbjct: 299 ANEARAL 305


>gi|68166026|gb|AAY87947.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  185 bits (469), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|68166028|gb|AAY87948.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  185 bits (469), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTELGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|289434610|ref|YP_003464482.1| riboflavin biosynthesis protein RibF [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|68166032|gb|AAY87950.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|289170854|emb|CBH27396.1| riboflavin biosynthesis protein RibF [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 314

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|254829914|ref|ZP_05234569.1| hypothetical protein Lmon1_01095 [Listeria monocytogenes 10403S]
 gi|284801714|ref|YP_003413579.1| hypothetical protein LM5578_1468 [Listeria monocytogenes 08-5578]
 gi|284994856|ref|YP_003416624.1| hypothetical protein LM5923_1421 [Listeria monocytogenes 08-5923]
 gi|284057276|gb|ADB68217.1| hypothetical protein LM5578_1468 [Listeria monocytogenes 08-5578]
 gi|284060323|gb|ADB71262.1| hypothetical protein LM5923_1421 [Listeria monocytogenes 08-5923]
          Length = 314

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYLVA-LHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|16803369|ref|NP_464854.1| hypothetical protein lmo1329 [Listeria monocytogenes EGD-e]
 gi|224501728|ref|ZP_03670035.1| hypothetical protein LmonFR_04297 [Listeria monocytogenes FSL
           R2-561]
 gi|255026685|ref|ZP_05298671.1| hypothetical protein LmonocytFSL_10695 [Listeria monocytogenes FSL
           J2-003]
 gi|16410745|emb|CAC99407.1| ribC [Listeria monocytogenes EGD-e]
          Length = 314

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYLVA-LHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|62262314|gb|AAX78060.1| unknown protein [synthetic construct]
          Length = 341

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 169/301 (56%), Gaps = 6/301 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 43  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 102

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 103 VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 162

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 163 LLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 221

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 222 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKNNLL 278

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ + YP    
Sbjct: 279 ETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQISKDIQTAKKLISTLYPYDVP 338

Query: 319 D 319
           D
Sbjct: 339 D 339


>gi|152981109|ref|YP_001352519.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Janthinobacterium sp. Marseille]
 gi|151281186|gb|ABR89596.1| riboflavin biosynthesis protein RibF [Janthinobacterium sp.
           Marseille]
          Length = 326

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 11/326 (3%)

Query: 7   IEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           +++ + LPN        +AIGNFDG+H GH  +L +  ++A+   +   V++F PHPR  
Sbjct: 1   MKVFRGLPNAASRAPCALAIGNFDGVHRGHQALLARLREVASKMGLESAVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSP---PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
             + +   + +P    S+++K+  L K G   +I   F    A+ S ++F++K+LV+ L 
Sbjct: 61  FAARAGDPSKAPTRIASLRDKLQSLAKAGVDRVIVEHFNAHFASLSPQEFVEKILVQGLH 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK +I G  F +G  RAG+   L + G++YGFH      + ++    +SSS +R AL  G
Sbjct: 121 VKWLIVGDDFCYGAKRAGNVATLIEAGKQYGFHVESQPTVTSSTGTRISSSAVREALLHG 180

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               A  LLG+ + +   VIHG+K+GRT+GFPT N++++       G+Y ++    D+  
Sbjct: 181 DFARAEELLGHPYAMSGHVIHGKKLGRTIGFPTLNVRVAHKHPALSGIYIVQVHGLDEQP 240

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE+ +FD+SQ+ YG+   V F   LR E K+ D+  L   
Sbjct: 241 LPGVASIGVRPTVDDSGRVLLETHLFDYSQQCYGRLIRVEFLKKLRDEEKYIDLPTLTAA 300

Query: 298 MGEDEKKARKILE--SSYPLSERDRI 321
           +  D  +AR   +  +    S  DRI
Sbjct: 301 INRDAIEARAYFKQLTDAATSATDRI 326


>gi|257059957|ref|YP_003137845.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8802]
 gi|256590123|gb|ACV01010.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8802]
          Length = 322

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 173/322 (53%), Gaps = 21/322 (6%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQS 65
           +  S  N L    +A+GNFDGIHLGH  +L+  +++ +++P    TV++F PHP+     
Sbjct: 3   VTSSTSNLLTPTAIALGNFDGIHLGHKQVLQPILRLTSDNPALYPTVVTFTPHPQEFFTG 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    L+P S + + LE +G   L+R  F  E A  S + F+  +L++ L+VK +  G 
Sbjct: 63  ETRQL-LTPVSEKIQRLEPLGIQQLVRLPFDRELAALSPQAFVSDILIKQLQVKQISVGE 121

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT------------- 172
            FRFG  R+G    L+K    YG  +V +  L  +K                        
Sbjct: 122 DFRFGHKRSGTAEDLRKIAANYGV-SVHVTALVEDKRGRGGEGERGGTLSSLRISSSLIR 180

Query: 173 -ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRF 230
             L  G++  A  +LGY +++   VI G+++GRT+GFPTAN+++SPD LL   GVY ++ 
Sbjct: 181 QCLADGNIKQANQMLGYCYSLIGKVIQGQQLGRTIGFPTANLEISPDKLLPRFGVYCVQI 240

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           + +      GV N G  PT+    P  +E  +FD+S+++Y Q  TV   ++LRPE KF  
Sbjct: 241 KRETGEIRQGVMNIGYRPTVEGQTP-TVEVHLFDWSEDLYQQTLTVELVEFLRPEQKFSS 299

Query: 291 IEKLKIYMGEDEKKARKILESS 312
           ++ LK  + +D + A++IL+ S
Sbjct: 300 LDALKDQISQDCQLAKEILDKS 321


>gi|254293349|ref|YP_003059372.1| riboflavin biosynthesis protein RibF [Hirschia baltica ATCC 49814]
 gi|254041880|gb|ACT58675.1| riboflavin biosynthesis protein RibF [Hirschia baltica ATCC 49814]
          Length = 324

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +FH  E   + P  ++G  VAIGNFDG+HLGH  ++   + +    N P+ VL F+P 
Sbjct: 1   MKLFHTFE---NAPESVRGAGVAIGNFDGLHLGHRGVISTLRDLCTERNIPLGVLMFDPT 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       SP   +     + K+L++ G        F  E A  +  +F + VL + L V
Sbjct: 58  PFIFFNPDSPSKRIMSLKRRVKVLKQGGLDVAFALPFDAEMAGRTDFEFAKDVLSDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNI 170
             V  G  F +GK R G+   L+K G++ GF  +  D++  N  +I        +SS+ I
Sbjct: 118 SAVSVGYDFCYGKKRMGNVTTLKKFGDEMGFDVLVTDKITPNNMEIGAHGEALKISSTQI 177

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           R  ++ G + +A  ++   +  E+ V HGEK GRT+GFPTANM+LS     K G+YA+  
Sbjct: 178 RELISDGDMESAKLMMKDYWVTEAKVEHGEKRGRTIGFPTANMKLSDYQQPKFGIYAVWT 237

Query: 231 RTQDQTSY-SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           R + + ++  GVANFGR PT     P LLE ++FDF  ++Y +   V+F  +LRPE K+ 
Sbjct: 238 RIEGEKNWRQGVANFGRTPTTGDRDP-LLEVYLFDFEGDLYDKELEVAFVKFLRPEEKYD 296

Query: 290 DIEKLKIYMGEDEKKARKIL 309
            +E L   + +D + A+++L
Sbjct: 297 GLEPLIAQIQKDTENAKQVL 316


>gi|312884037|ref|ZP_07743754.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368495|gb|EFP96030.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 311

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 165/306 (53%), Gaps = 14/306 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE----QAIKIANNSPITVLSFNPHPR 60
           HNI+     P+H KG V+ IGNFDG+HLGH  +L     QA K+    P  V++F P P 
Sbjct: 8   HNIQ-----PHH-KGCVLTIGNFDGVHLGHQEVLRRVDSQAKKLG--VPSVVMTFEPQPM 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +         L+    +   +  +G   L+   F  + AN +A+QFI  +LV+ L VK 
Sbjct: 60  ELFLGHKAPARLTRLRDKYAQIRTLGIDRLLCVSFNKKLANLAADQFIADLLVKKLGVKF 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FG+DRAGD  +LQK G++YGF  V        KS  VSS+ +R AL +  + 
Sbjct: 120 LVVGDDFCFGRDRAGDFSMLQKAGKEYGFDVVSTQSF-CLKSIRVSSTEVRKALVQNQLS 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
             + +LG R++I   V HG KIGRTLGFPTAN+ L  ++    GVY +     + +   G
Sbjct: 179 LVSQMLGRRYSISGRVSHGRKIGRTLGFPTANVPLKRNVSPISGVYIVEVYGINDSPIGG 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  PT V      LE  +FDF+ ++YG++  +     LR E KF+  E LK  +  
Sbjct: 239 VANIGHRPT-VDGKKQQLEVHLFDFNADLYGKQIEIVLLSKLRDEKKFESFELLKQQIKL 297

Query: 301 DEKKAR 306
           D + AR
Sbjct: 298 DAEAAR 303


>gi|293391731|ref|ZP_06636065.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952265|gb|EFE02384.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 310

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 167/308 (54%), Gaps = 16/308 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +LP +L    + IGNFDG+HLGH  IL    + A   + P+ V+ F P PR         
Sbjct: 9   NLPQNLHACALTIGNFDGVHLGHQAILRHLREKAGELHLPMVVMLFEPQPREYFCGEDAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +   LE+ G   +I  KF    A   A+QFI+  LV  L+VK +  G  F+F
Sbjct: 69  ARLMRLRDKLHYLEQAGVDTVIVAKFDRTFAALPAQQFIKDWLVRKLKVKFLSIGDDFKF 128

Query: 130 GKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           G  R G+  +LQ+ GE++GF      +  +DELR      +SS+ IR AL    +  A  
Sbjct: 129 GAKRQGNFAMLQQAGEQFGFTVEDNRSFCLDELR------ISSTAIRLALANDDLPLAEK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + I   VIHG+++GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN 
Sbjct: 183 LLGHPYRILGRVIHGDELGRTIGFPTANIRLHRQVNPVKGVYAVKVRLKSGAFFNGVANI 242

Query: 245 GRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G  PT+  NG   LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  + +D  
Sbjct: 243 GTRPTI--NGVNQLLEAHLFDFQGDLYGQWLEVELCHKIRNEMKFPSFDTLKAQIAQDVV 300

Query: 304 KARKILES 311
            A+K+ E 
Sbjct: 301 TAKKVFEG 308


>gi|269103424|ref|ZP_06156121.1| riboflavin kinase/FMN adenylyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163322|gb|EEZ41818.1| riboflavin kinase/FMN adenylyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 320

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 163/301 (54%), Gaps = 5/301 (1%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT 71
           P H  G V+ IGNFDG+HLGH  +L+Q I  A+    P TV+ F P P  +   S     
Sbjct: 12  PRH-HGCVLTIGNFDGVHLGHQAVLKQLIVKAHEMSLPATVMCFEPQPLEMFAPSRAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +   L+ +G   L+   F    AN +AE+F++++LVE L VK ++ G  FRFGK
Sbjct: 71  LTRFRDKYLQLKNVGVERLLCVNFNAHFANLTAEEFVRRLLVEQLGVKFLVVGDDFRFGK 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR G+  +L   G++YGF  V       +K Q VSS+ IR AL   ++++A  +LG  ++
Sbjct: 131 DRVGNFDMLVAAGKQYGFEVVSTQSFCVSK-QRVSSTAIRQALASDNLVDAETMLGRPYS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   +    GVYA+      +    GVAN G  PT V
Sbjct: 190 INGRVSHGRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVYGVGEKPIPGVANIGHRPT-V 248

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 LE  +FDF  ++YG++  V     LR E KF+  + LK  +  D + AR  L  
Sbjct: 249 KGVRQQLEVHLFDFHSDLYGRQIEVVLRHKLRDEQKFESFDALKAQIEHDAQSARLWLAE 308

Query: 312 S 312
           +
Sbjct: 309 A 309


>gi|74317874|ref|YP_315614.1| FMN adenylyltransferase / riboflavin kinase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057369|gb|AAZ97809.1| riboflavin kinase [Thiobacillus denitrificans ATCC 25259]
          Length = 309

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 4/295 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V IGNFDG+HLGH  +L   QA+  A      VLSF PHPR           LS    +
Sbjct: 15  AVTIGNFDGLHLGHQAMLARLQAVARARGLSSCVLSFEPHPREFFAPEQAPARLSSLREK 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L+++G      ++F    ++ SAE FI++VL   L+ + V+ G  FR+G  RAGD  
Sbjct: 75  AECLQRLGVDRFHVFRFDRPFSSLSAEAFIEQVLGHTLQARYVLVGDDFRYGAKRAGDFA 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G   GF    +  +     +  SS+ +R AL  G + +A  LLG  ++I   V+H
Sbjct: 135 LLQQAGAHLGFDAEHLPTV-EIAGERASSTAVRQALAAGELHHAGCLLGRPYSISGRVVH 193

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGPLL 257
           G+K+GR +GFPTAN+QL  +     G+YA+     +     GVA+ GR PT+   +   +
Sbjct: 194 GDKLGRAIGFPTANIQLRHNRPPLMGIYAVELCGLNGAPLQGVASLGRRPTVKGADAVPV 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LE  +FDF  +IYG+R  V F   LR E ++ D++ L   +  D + AR+ L  +
Sbjct: 254 LEVHLFDFDADIYGRRVRVDFLHKLRDEERYPDLDSLVAQIRRDVEDARQFLAKT 308


>gi|71908660|ref|YP_286247.1| FMN adenylyltransferase / riboflavin kinase [Dechloromonas
           aromatica RCB]
 gi|71848281|gb|AAZ47777.1| FMN adenylyltransferase / riboflavin kinase [Dechloromonas
           aromatica RCB]
          Length = 306

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/277 (38%), Positives = 159/277 (57%), Gaps = 4/277 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIGNFDG+HLGH  ++ +  ++A N  +   VL+F PHPR      S    LS    +
Sbjct: 16  VLAIGNFDGVHLGHAALIRRLAEVAENCQLAPMVLTFEPHPREFFAPESAPARLSTLREK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L   G S ++   F    +  SAE+FI++VLV   +V+ +I G  FRFG+ R GD  
Sbjct: 76  LELLGDSGVSQVMICPFNGAFSALSAEEFIEQVLVRGCQVRHLIIGDDFRFGRGRTGDFA 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G+++GF    +  +     + VSSS +R AL  G + +AA LLG  + I+  V H
Sbjct: 136 LLQEAGQRFGFTVEAMGSV-TVAGERVSSSAVRKALAIGDMEHAALLLGRPYIIDGQVSH 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K+GR LGF TAN+++  + L   GV+A+      + +  GVAN G  PT+    P LL
Sbjct: 195 GQKLGRQLGFATANLRIKHNPLPMSGVFAVEVSGLGEQALPGVANLGIRPTVGGTRP-LL 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           E  +FDF ++IYG   +V F   LR E +F + + LK
Sbjct: 254 EVHLFDFDRDIYGAHISVRFVHKLRNEQRFPNFDALK 290


>gi|47095914|ref|ZP_00233517.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           1/2a F6854]
 gi|254898506|ref|ZP_05258430.1| hypothetical protein LmonJ_01785 [Listeria monocytogenes J0161]
 gi|254912003|ref|ZP_05262015.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes J2818]
 gi|254936330|ref|ZP_05268027.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes F6900]
 gi|47015660|gb|EAL06590.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           1/2a F6854]
 gi|258608920|gb|EEW21528.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes F6900]
 gi|293589967|gb|EFF98301.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes J2818]
          Length = 314

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   +V  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYVVA-LHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|302389791|ref|YP_003825612.1| riboflavin biosynthesis protein RibF [Thermosediminibacter oceani
           DSM 16646]
 gi|302200419|gb|ADL07989.1| riboflavin biosynthesis protein RibF [Thermosediminibacter oceani
           DSM 16646]
          Length = 325

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 174/302 (57%), Gaps = 18/302 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII--QSSSPIFTLSPP 75
               +GNFDG+HLGH  ++ + + IA+   +   V++F PHP  I+  + SSP+ T    
Sbjct: 16  AACGLGNFDGVHLGHQKLISELVTIADEKGLESFVVTFEPHPSKILFPEKSSPLIT--SL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++K++E  G   L+   FT   +  S E+FI  VL+E L+ K V+ G  FRFG   +G
Sbjct: 74  GQKQKVIEAHGVKNLVVIPFTRTFSEMSYEEFIDCVLIEKLKAKLVVVGYNFRFG---SG 130

Query: 136 DRGILQK---RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            RG +++    G+K GF T+ I  +   + ++VSS+ IR+ + +G ++ A  LLG  F+I
Sbjct: 131 GRGTVEELIIMGKKKGFDTLIIPPV-TLEEKVVSSTLIRSMIERGDMVEARALLGRPFSI 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTM- 250
           E  V+ GE IGR LGFPTAN+  SP+I++   GVYA+    + +  Y G+AN G  PT  
Sbjct: 190 EGKVVTGEAIGRKLGFPTANVSFSPEIVVPAYGVYAVLVSLRGKF-YKGIANVGEKPTFK 248

Query: 251 --VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             V N    LE  IFDF+++IYG+   V F + +R E  F D + L   + +D  +AR I
Sbjct: 249 RKVANNQPTLEVHIFDFNEQIYGEEVEVYFIERIRDERLFPDAKSLAQQVKQDFLRARSI 308

Query: 309 LE 310
           L+
Sbjct: 309 LD 310


>gi|33596601|ref|NP_884244.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           parapertussis 12822]
 gi|33601156|ref|NP_888716.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           bronchiseptica RB50]
 gi|33573302|emb|CAE37285.1| riboflavin biosynthesis protein [Bordetella parapertussis]
 gi|33575591|emb|CAE32669.1| riboflavin biosynthesis protein [Bordetella bronchiseptica RB50]
          Length = 321

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 7/300 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P+      + IGNFDG+HLGH  IL +  + A    +   V++F PHPR    + +    
Sbjct: 14  PSQRTPCALTIGNFDGVHLGHQAILARVRQEARARGLVPAVMTFEPHPREYFATLNRRPE 73

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  L   G   +   +F    A  SA  FI+ +LV  L+ + ++ G  
Sbjct: 74  LAPTRISGLRDKLQALAAAGIEQVAVERFDARLAEMSANAFIEDLLVAGLQTRWLLVGED 133

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FR+G  R+GD  +L++ G  +GF    + ++ + +   +SSS +RTAL  G +  AA LL
Sbjct: 134 FRYGHKRSGDIDLLREAGLAHGFEVCTLADITDRQGHRISSSEVRTALAVGDLDRAAQLL 193

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F I   VIHG K+GR LGFPT N++++P    + G+Y +R           VA+ G 
Sbjct: 194 GQPFHISGHVIHGRKLGRELGFPTMNLRVAPRCATRSGIYVVRVLGLQDRPLPAVASLGV 253

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+   G +LLE+ + D S + YG+   V F   LR E KF D+  L   + +D + AR
Sbjct: 254 RPTVEDRGRVLLEAHLLDESLDAYGKLVRVEFLHKLRDEEKFADLPSLTAAIAQDAQNAR 313


>gi|68166036|gb|AAY87952.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++     G   V I + +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYAN--GRFDVTIVDKQTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T Y G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-YLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|218246896|ref|YP_002372267.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8801]
 gi|218167374|gb|ACK66111.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8801]
          Length = 322

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 172/322 (53%), Gaps = 21/322 (6%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQS 65
           +  S  N L    +A+GNFDGIHLGH  +L+  +++ +++P    TV++F PHP+     
Sbjct: 3   VTSSTSNLLTPTAIALGNFDGIHLGHKQVLQPILRLTSDNPALYPTVVTFTPHPQEFFTG 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    L+P S + + LE +G   L+R  F  E A  S + F+  +L++ L+VK +  G 
Sbjct: 63  ETRQL-LTPVSEKIQRLEPLGIQQLVRLPFDRELAALSPQAFVSDILIKQLQVKQISVGE 121

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT------------- 172
            FRFG  R+G    L+K    YG  +V +  L  +K                        
Sbjct: 122 DFRFGHKRSGTAEDLRKIAANYGV-SVHVTALVEDKRGRGGEGERGGTLSSLRISSSLIR 180

Query: 173 -ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRF 230
             L  G++  A  +LGY +++   VI G+++GRT+GFPTAN+++SPD LL   GVY ++ 
Sbjct: 181 QCLADGNIKQANQMLGYCYSLIGKVIQGQQLGRTIGFPTANLEISPDKLLPRFGVYCVQI 240

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           + +      GV N G  PT+    P  +E  +FD+S+++Y Q  TV   ++LRPE KF  
Sbjct: 241 KRETGEIRQGVMNIGYRPTVEGQTP-TVEVHLFDWSEDLYQQTLTVELVEFLRPEQKFSS 299

Query: 291 IEKLKIYMGEDEKKARKILESS 312
           ++ LK  + +D + A++I + S
Sbjct: 300 LDALKDQISQDCQLAKEIFDQS 321


>gi|255533430|ref|YP_003093802.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
           2366]
 gi|255346414|gb|ACU05740.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
           2366]
          Length = 311

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 177/309 (57%), Gaps = 14/309 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M+++H+    + L N     V  IG FDG+H GH  I+++  ++A  +     +L+F PH
Sbjct: 1   MNIYHHFSEFKRLNN----AVATIGTFDGVHYGHQKIIKRLCELARATGGESVILTFFPH 56

Query: 59  PRTIIQ-SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR II   +  +  ++    + KIL  +G   LI   FT + +N SAE++I+ +LV+ + 
Sbjct: 57  PRLIIDPENQDLKMINTIDEKAKILAALGVDHLIITPFTRDFSNLSAEEYIKNILVDTIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K +I G   RFGKDR G    L      Y +    I E   N    VSS+ +R AL  G
Sbjct: 117 IKNLIVGYDHRFGKDRKGGMPELLALARTYSYQIEVIPEQDINDVA-VSSTKVRNALLNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN--MQLSPDILLKEGVYAIRFRTQDQ 235
            V  AA  LGY F++   VI G+KIGRT+GFPTAN  ++ +  ++  +G+YA+    ++Q
Sbjct: 176 QVALAAEYLGYNFSLHGRVIKGDKIGRTIGFPTANIFIEETYKLIPSDGIYAVTVDMEEQ 235

Query: 236 TSYSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            S+ G+A  G+ PT+  NG    +E  IFDF +EIYGQ  T++F  +LR ++KF  +E L
Sbjct: 236 -SFRGMAYIGQRPTI--NGMTRNIEVNIFDFDREIYGQDITMTFLQFLRHDVKFTGLEAL 292

Query: 295 KIYMGEDEK 303
           KI + +D++
Sbjct: 293 KIQLQKDKE 301


>gi|71278470|ref|YP_267924.1| riboflavin biosynthesis protein RibF [Colwellia psychrerythraea
           34H]
 gi|71144210|gb|AAZ24683.1| riboflavin biosynthesis protein RibF [Colwellia psychrerythraea
           34H]
          Length = 306

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 169/308 (54%), Gaps = 13/308 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI++N    +H    V+ IGNFDG+HLGH  +++  +  A   N    VL F P P+ +
Sbjct: 8   HNIQLN----DH--SCVLTIGNFDGVHLGHQQVIKALVSKAKALNCVAAVLVFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    L     +  +L K+G   LI   FT + AN SA+ FI+ +LV  L +K +I
Sbjct: 62  FSPETAPARLCRLRDKYNLLAKLGVQRLICVNFTAKFANQSAKHFIENLLVAKLGIKHLI 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK+R G+  +L++ GEK+GF        +    +I SS+ IR AL +  +++ 
Sbjct: 122 VGDDFHFGKNRTGNFSMLRQAGEKFGFDVSDTASYKMADCRI-SSTAIRQALEQDDLVSV 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG  ++I   V HG+K GR LGFPTAN+ L   +    GV+A+  +T D   + GVA
Sbjct: 181 KQMLGREYSIIGRVFHGDKRGRQLGFPTANVLLKRRVSPLSGVFAVMVKTND-GEFKGVA 239

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG    LE  IFDF + +YGQ   V     LRP IKF  +E L   + +D
Sbjct: 240 NIGARPTV--NGIRQQLEVHIFDFDENLYGQCIEVVVKRKLRPVIKFDSLEALTAQIRQD 297

Query: 302 EKKARKIL 309
            ++A+++L
Sbjct: 298 SEQAKQVL 305


>gi|68166034|gb|AAY87951.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVRYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++     G   V I + +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYAN--GRFDVTIVDKQTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T Y G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-YLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|300024115|ref|YP_003756726.1| riboflavin biosynthesis protein RibF [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525936|gb|ADJ24405.1| riboflavin biosynthesis protein RibF [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 308

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           MHV H    ++ +P   +G  +AIGNFDG+H GH  ++ +A   A    +    + F PH
Sbjct: 1   MHVIHG---HKHVPPEHRGASIAIGNFDGVHRGHRALIREAKAKAREKGTASAAMVFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q +   F L+  + +  I EK+G   +    F  + A    E FI++VLV  L  
Sbjct: 58  PREFFQPNEVQFRLTTLNRKLAIFEKLGLDLVFVEPFDADLAALPGEAFIERVLVAGLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG  R G+  ++ + GE+ GF    +  +  + + + SSS +R  L +G 
Sbjct: 118 AHVVIGYDFYFGHKRGGNPELMVRSGEELGFGVTVMPPIAEDGA-VFSSSGVRLHLAQGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V    H+LG  + +   VI G K G  +G+PTAN+ +     L  G+YA+R    DQT Y
Sbjct: 177 VKGVTHMLGEPWRVSGRVIGGAKRGTGMGYPTANIPMPKGTTLGHGIYAVRTHLDDQT-Y 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              A  G  PT   +G  +LE F+FDF+ +IYG+   V F D++R + +F+  E+L + M
Sbjct: 236 DAAAYLGTRPTF-DDGHPVLEVFLFDFNGDIYGREIEVEFIDFIRSDRRFRSAEELVVQM 294

Query: 299 GEDEKKARKILESS 312
             D  +A+ +L ++
Sbjct: 295 EADIAQAKAVLSAN 308


>gi|206891050|ref|YP_002248546.1| riboflavin biosynthesis protein RibF [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742988|gb|ACI22045.1| riboflavin biosynthesis protein RibF [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 317

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 167/299 (55%), Gaps = 6/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IGNFDG+H+GH  I +   + A+  N    V++F+PHP  ++    P+  ++  
Sbjct: 13  KNTVITIGNFDGVHIGHQKIFDYLKRKASQINGKSVVITFHPHPIKVLFKEHPLRLITTT 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K++EK G    I   FT E A   AE F++ +LVE L  K V+ G  +RFG+ R G
Sbjct: 73  DDKLKLIEKCGVDITILIPFTREFAQIEAEDFVKDILVEKLNAKWVVVGYDYRFGRGRKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           DR +L+K G  YGF    +   + +K +I+SS+ +R AL  G++  A   LG  + I+ D
Sbjct: 133 DRYLLKKLGLFYGFKVTVLKAYK-SKGKILSSTAVRNALNDGNIKEANLFLGRAYHIDGD 191

Query: 196 VIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMVPN 253
           VI G   G T LG+PTAN+    +I+ KEGVYA++      + ++ GVAN G+NPT   N
Sbjct: 192 VIKGLGRGSTVLGYPTANIAPIQEIIPKEGVYAVKVTIPHLSKTFKGVANIGKNPTF-NN 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +  E  IFDF + + G+   V F   LR E KF   ++LK  +  D + A+K+ +  
Sbjct: 251 VNMSYEVHIFDFKENLLGKTIRVHFIARLRDEKKFNSPDELKKNIAHDIEMAKKVFKQD 309


>gi|323700578|ref|ZP_08112490.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. ND132]
 gi|323460510|gb|EGB16375.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           ND132]
          Length = 327

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 13/317 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQS--S 66
           Q +   + G  V IGNFDG+H GH  ++  A + A    +T  V++F+PHP  ++++  +
Sbjct: 8   QDIQGVIAGSCVTIGNFDGVHKGHQKLIALACERAKARDLTSVVVTFDPHPLRVLRNDRT 67

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            P  TL+   ++  ++ + G    +  +FT++ A  S E+F++  LV+ L+VK +I G  
Sbjct: 68  PPFITLTEQKLE--LISQYGPQVCLLLEFTMDMARLSPEEFVKTYLVDGLKVKDMIIGYD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           +  GK RAG+   L + G KYGF    +D +  + + IVSS+ IR  +  GHV     LL
Sbjct: 126 YHLGKGRAGNFETLCELGGKYGFTVDRLDPVTIDNA-IVSSTRIRDLVQAGHVWAVRPLL 184

Query: 187 GYRFTIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           G  + +  +V+HG  + G+ LGFPTAN++L  ++  K GVYAI +   D   Y GVAN G
Sbjct: 185 GRFYQVTGEVVHGMNRGGKLLGFPTANLKLVDELFPKPGVYAI-WAEVDGAVYEGVANIG 243

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           +NPT   N  L +E+ + DFS +IYG    V F   +R E KF  +++LK  + +D +  
Sbjct: 244 KNPTF-GNDVLSVEAHLLDFSGDIYGDVIRVHFVQRIRDEKKFNGLDELKDRIAKDVELG 302

Query: 306 RKIL---ESSYPLSERD 319
           R+IL   E++  L+  D
Sbjct: 303 RRILAQPEAAIKLTHPD 319


>gi|187477910|ref|YP_785934.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           avium 197N]
 gi|115422496|emb|CAJ49021.1| riboflavin biosynthesis protein [Bordetella avium 197N]
          Length = 321

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 157/300 (52%), Gaps = 7/300 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P       + IGNFDG+H GH  IL Q  + A    +  +V++F PHPR      +    
Sbjct: 14  PGQCAPCALTIGNFDGVHRGHQAILAQVREAAEKRGLIPSVMTFEPHPREYFARLNRRPE 73

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  L   G   ++   F    A+ SA  FI+ +LV+ L  + ++ G  
Sbjct: 74  LAPTRISGLRDKVSALACAGIKQVLIEPFNARLADMSANAFIEDLLVKGLRTRWLLVGED 133

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG+ R+GD  +L++ G  +GF    + ++ +     +SSS +RTAL  G +  A HLL
Sbjct: 134 FRFGRKRSGDIDLLREAGLSHGFEVATLADVTDRHGHRISSSEVRTALAVGDLERAQHLL 193

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ F +   VIHG K+GR LGFPT N++++P    + G+Y +R         + VA+ G 
Sbjct: 194 GHPFRVSGHVIHGRKLGRELGFPTMNLRVAPRFAARSGIYVVRAHGLGDQPLAAVASLGV 253

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            P++   G +LLE ++ D     YG+   + F   LR E K+ D+  L   + ED + AR
Sbjct: 254 RPSVEEAGRVLLEVYLLDERINAYGKLVHIEFLHKLRDEEKYPDLPSLTAAIAEDARNAR 313


>gi|161344765|ref|NP_441016.2| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechocystis sp. PCC 6803]
          Length = 313

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 162/297 (54%), Gaps = 13/297 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP----ITVLSFNPHPRTIIQS-SSPIFTLSPP 75
            +A+GNFDG+H GH ++L Q +  A          V+SFNPHPR+     + P+ T  P 
Sbjct: 15  AIALGNFDGVHRGHGVVLRQVMDFAQAVEHLLHPAVVSFNPHPRSFFSGRTQPLLTPLPE 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
              +  L  +G   L+   FT + AN S +QF+Q +LVE L+ K +  G  F FG  R G
Sbjct: 75  KAAQ--LTAIGIEQLVLLPFTEKLANLSPKQFVQSILVEQLQAKFISVGQDFCFGHQRRG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ  G+++G  TV I +L    ++ +SSS IR AL +G +  A HLLG  + +   
Sbjct: 133 NVQDLQNLGQEFGI-TVAIAQLEQTDTERISSSRIRRALKEGKLAMANHLLGRPYALRGT 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYA--IRFRTQDQTSYSGVANFGRNPTMVP 252
           V+ G+++GR LGFPTAN+ L  D L  K GVYA  +     D      V N G  PT+  
Sbjct: 192 VVQGQQLGRKLGFPTANLCLPADKLWPKYGVYAGWVNLNALD-VPIPAVINLGDRPTVNG 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             P   E  +  +S ++YGQ   V+   YLRPE KF  +++LK  + +D ++A K+L
Sbjct: 251 QEP-SAEVHLLQWSGDLYGQGLEVALTHYLRPETKFAGLDQLKNQIAQDCQQAEKLL 306


>gi|285017716|ref|YP_003375427.1| riboflavin biosynthesis protein [Xanthomonas albilineans GPE PC73]
 gi|283472934|emb|CBA15439.1| probable riboflavin biosynthesis protein [Xanthomonas albilineans]
          Length = 329

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 166/312 (53%), Gaps = 8/312 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  ++ QA     A   P   LSF P PR
Sbjct: 4   LFRDVEGGTLFP---QGSVVCIGAFDGLHLGHRALVRQASARACALGVPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P   L+    + + L+++G  ++   +F    A+ +AE F+Q+VLVE L  + 
Sbjct: 61  EFFAPDAPPPRLTLARSKVQGLQQLGIESVGLLRFDRRMASMTAEAFVQRVLVERLRARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G  FRFG  RAGD  +L+  G ++GF    I  +  ++ +I SS+ IR  L  G   
Sbjct: 121 VWIGPAFRFGHKRAGDIALLRALGVQFGFTADEIAPVHLHEERI-SSTRIRELLVAGEFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++GRTLG+PTAN++ +    L  G+YA          +  
Sbjct: 180 HAADLLGRPYAIGGRVVRGKQLGRTLGYPTANLRFARAPALS-GIYATWVHGAAAQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E  F D+  L   M  
Sbjct: 239 VSSFGTRPTVQGVEP-LLEAHLFDFQGDLYGRHLEVEFVAKLRDEETFADLPALTAQMHR 297

Query: 301 DEKKARKILESS 312
           D  +AR +L ++
Sbjct: 298 DAAQARHVLAAA 309


>gi|290893560|ref|ZP_06556543.1| ribC protein [Listeria monocytogenes FSL J2-071]
 gi|290556905|gb|EFD90436.1| ribC protein [Listeria monocytogenes FSL J2-071]
          Length = 314

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|161936327|ref|YP_128815.2| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photobacterium profundum SS9]
          Length = 323

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 169/320 (52%), Gaps = 18/320 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI+     P H    V+ IGNFDG+HLGH  +L Q I  A +   P TV++F P P  +
Sbjct: 8   HNIK-----PRH-HDCVLTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
             + +    L+    +   L+K G   L+   F  + AN SAE F++++LVE L VK ++
Sbjct: 62  FAADNAPARLTRFRDKYTQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFGK R G+  +L+  G+++GF  V          Q VSS+ IR AL    +  A
Sbjct: 122 VGDDFRFGKGRRGNFEMLEAAGQEFGFVVVSTQSF-CMLEQRVSSTAIRHALVNDQLPLA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D     GVA
Sbjct: 181 ASMLGRSYSISGRVSHGRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVFGVDGAPLPGVA 240

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG    LE  +FDF  ++YG +  V     LR EIKF+  + LK  +  D
Sbjct: 241 NVGHRPTV--NGVRQQLEVHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQIERD 298

Query: 302 EKKARKILESSYPLSERDRI 321
            + AR        LSER+ +
Sbjct: 299 AQTAR------VWLSERNNV 312


>gi|224499910|ref|ZP_03668259.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           Finland 1988]
          Length = 314

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|212636474|ref|YP_002312999.1| riboflavin kinase /FAD synthetase [Shewanella piezotolerans WP3]
 gi|212557958|gb|ACJ30412.1| Riboflavin kinase / FAD synthetase [Shewanella piezotolerans WP3]
          Length = 309

 Score =  182 bits (462), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 171/311 (54%), Gaps = 12/311 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     LP H  G V+ IGNFDG+H GH  ++ + ++ A   + P  V++F P P+  
Sbjct: 6   HNI-----LPQH-HGCVLTIGNFDGVHRGHAEVINRLVEKAKHLDLPAVVMTFEPQPQEF 59

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +L+++    ++   F  + A+Y+AE F++++LV+ L VK ++
Sbjct: 60  FRGENAPARLSLLRDKVMLLDELSIERMLCINFNKKFADYTAEDFVEQLLVKALGVKYLV 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R G+  +L+K GEK+GF  V          + VSS+ +R  L +G++  A
Sbjct: 120 VGDDFCFGKQRQGNFDMLRKAGEKFGFAVVSTQSFVLGDKR-VSSTEVRRLLAEGNMEQA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ F +   V HG+KIGRT+GFPTAN+ L   +    GV+A++    +   Y GVA
Sbjct: 179 RRLLGHPFILSGKVAHGQKIGRTIGFPTANIALKRKVTPVRGVFAVKLYWDNSDIYEGVA 238

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  ++YG+   V     +R E  F  ++ LK  +  D
Sbjct: 239 NVGFRPTV--NGQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQIKND 296

Query: 302 EKKARKILESS 312
             +A+ +L S 
Sbjct: 297 ADRAKALLGSD 307


>gi|313608976|gb|EFR84722.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           F2-208]
          Length = 317

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 24  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 84  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 142

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 143 TDLAQYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 200

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 201 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 259

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 260 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTR 309


>gi|254827590|ref|ZP_05232277.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N3-165]
 gi|258599967|gb|EEW13292.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N3-165]
          Length = 314

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQSFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|94501196|ref|ZP_01307718.1| hypothetical protein RED65_07969 [Oceanobacter sp. RED65]
 gi|94426623|gb|EAT11609.1| hypothetical protein RED65_07969 [Oceanobacter sp. RED65]
          Length = 323

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 162/291 (55%), Gaps = 5/291 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+HLGH  +L++         +   V+ F P P+           L   
Sbjct: 30  EGCVLTIGNFDGVHLGHQALLDKVKAKGEELSLQTAVMIFEPQPKEFFDPDGAPARLCNL 89

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++ ++     L    F       +AE F+Q+VL++ L VK +I G  FRFG DR+G
Sbjct: 90  AEKIQLFQRQNIDVLACMAFNPRFRQLTAEAFVQQVLIDALNVKALIVGDDFRFGCDRSG 149

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ GE+YGF       +  + ++ VSS+ +R AL +G +L+AA LLG  ++I   
Sbjct: 150 DFAFLQEAGERYGFSVEDTQTIAQSGNR-VSSTRVRQALEEGRLLDAAELLGRPYSISGR 208

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + HG+K+GRT+G PTAN+ L  +     GV+A++   + Q  + GVAN G  PT V    
Sbjct: 209 IAHGQKLGRTIGTPTANVILKREKAPLRGVFAVKVICK-QGEFKGVANIGTRPT-VGGVK 266

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             LE+ +FDFS ++YGQR  V F + +R E +F  I+ LK  + +D + A+
Sbjct: 267 ANLEAHLFDFSGDLYGQRIDVIFCEKIRDEKRFDGIDALKAAIEQDRQLAK 317


>gi|313619125|gb|EFR90917.1| riboflavin biosynthesis protein RibF [Listeria innocua FSL S4-378]
          Length = 314

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TELENYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTR 306


>gi|149192165|ref|ZP_01870385.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           shilonii AK1]
 gi|148834005|gb|EDL51022.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           shilonii AK1]
          Length = 311

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 157/298 (52%), Gaps = 4/298 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
            +L N   G V+ IGNFDG+HLGH  +LEQ  K A     P  V++F P P  +      
Sbjct: 8   HNLKNQHHGCVLTIGNFDGVHLGHQRVLEQVKKKALLLGLPAVVMTFEPQPMELFAKDKA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++LE M    L+   F    A+ S E FI+ +LV  L VK ++ G  FR
Sbjct: 68  PARLTRLRDKFELLEAMHLDRLLCVNFNRRFASMSPESFIKDLLVNKLGVKFLVIGDDFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G+  +L+K GE++GF  V         ++ VSS+ IR AL   H+  +A +LG 
Sbjct: 128 FGKGREGNFDMLKKAGEEFGFEVVNTASFCVEDTR-VSSTAIRQALASDHLDESAEMLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            +T+   V HG+K+ R  GFPTAN+ L   +    GVYA++    D     G+AN G+ P
Sbjct: 187 HYTLSGRVAHGQKLARDFGFPTANISLKRYVSPVRGVYAVQVYGVDSQPLPGIANVGKKP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T+    P  LE  IFDF   +YG++  V+    +R E KF+ +E LK  +  D   AR
Sbjct: 247 TVAGTTP-DLEVHIFDFEGNLYGKQIEVALLHKIRDEKKFESLELLKQQIELDADVAR 303


>gi|315302986|ref|ZP_07873704.1| riboflavin biosynthesis protein RibF [Listeria ivanovii FSL F6-596]
 gi|313628636|gb|EFR97051.1| riboflavin biosynthesis protein RibF [Listeria ivanovii FSL F6-596]
          Length = 314

 Score =  182 bits (461), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIATQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMTDLGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+  G   G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLE--GYANGRFEVTIVDKQTASSDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGKT-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|239993318|ref|ZP_04713842.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii ATCC
           27126]
          Length = 306

 Score =  182 bits (461), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 160/304 (52%), Gaps = 8/304 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           +N   P+H KG V+ IG FDG+H GH  +L   ++ A +   P TV+ F P P  +    
Sbjct: 7   LNNVKPHH-KGCVLTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQPEEVFMPD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +SP   + ++L + G   L+  +F  E A  SA+ F+  +LV+ L VK ++ G  
Sbjct: 66  KAPARISPLREKYELLRQQGVDRLLAVRFNAEFAKQSADTFVHDLLVDKLGVKFLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD  +L+  G +YGF  V       +  +I SS+ +R AL       +  +L
Sbjct: 126 FRFGNGRKGDFEMLEAAGRQYGFEVVSTHSFTMHAHRI-SSTAVREALADSDFGLSTEML 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F I   V+HGEK GRT+GFPTAN+ L        GV+A+R    D   Y+GVAN G 
Sbjct: 185 GRPFAIHGRVVHGEKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHYNGVANIGT 243

Query: 247 NPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG    LE  IFD S ++YG+  TV     +R EIKF   E LK  +  D  +A
Sbjct: 244 RPTV--NGVRNQLEVHIFDLSSDLYGKPITVFPMAKIRDEIKFDSFEALKDQIQADAAQA 301

Query: 306 RKIL 309
           R +L
Sbjct: 302 RLLL 305


>gi|308068704|ref|YP_003870309.1| riboflavin biosynthesis protein ribC [Paenibacillus polymyxa E681]
 gi|305857983|gb|ADM69771.1| Riboflavin biosynthesis protein ribC [Paenibacillus polymyxa E681]
          Length = 312

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/296 (38%), Positives = 170/296 (57%), Gaps = 14/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+HLGH  ++ +A+ +A     P++V++F+PHP+ +++       L+P + +
Sbjct: 23  VTAIGQFDGLHLGHASVIRKAVALAREQQVPVSVMTFHPHPKEVMKKGDYEGYLTPLADK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + IL  MG   L    F  + +  S E F+  VL+  L+++T + G  FRFG   AG   
Sbjct: 83  QTILADMGVDVLYILSFNEDFSKVSPEAFMSDVLLP-LQIRTAVVGFDFRFGHRGAGHED 141

Query: 139 ILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L+K  GE    HTV   EL  +K   VSSS IR AL  G + +A+  LG  + I+  V+
Sbjct: 142 TLRKLGGELMSVHTVSPFELDGDK---VSSSRIRRALQNGDLAHASRWLGRPYRIQGTVM 198

Query: 198 HGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            GEK GRT+GFPTAN++L    ++  +GVYA+R    D+   +GV N G  PT   +  +
Sbjct: 199 DGEKRGRTIGFPTANLKLDDTYVIPIKGVYAVRALVGDRW-INGVMNVGVKPTF--HEGV 255

Query: 257 LLESF---IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           L  SF   +FDF+Q+IYG    V    Y+RPE KF  +++L   +G D + A+K+L
Sbjct: 256 LNPSFEVHLFDFNQQIYGDSVLVELHHYIRPERKFSSVDELISQIGNDAQTAKKLL 311


>gi|328676513|gb|AEB27383.1| Riboflavin kinase / FMN adenylyltransferase [Francisella cf.
           novicida Fx1]
          Length = 306

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 171/296 (57%), Gaps = 12/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI-IQSSSP--IFTLSPP 75
            +AIG+FDG+HLGH  I+++ + IAN + +   +L F P P+   ++  +P  I+     
Sbjct: 17  AIAIGSFDGVHLGHQTIIKKLLTIANENNLVPYILFFEPLPKEFFLKDKAPLRIYDFRNK 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I    + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R G
Sbjct: 77  VIN---IHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S 
Sbjct: 134 DYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +    
Sbjct: 193 VIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 250 NLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|254372409|ref|ZP_04987899.1| riboflavin kinase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373880|ref|ZP_04989362.1| hypothetical protein FTDG_00034 [Francisella novicida GA99-3548]
 gi|151570137|gb|EDN35791.1| riboflavin kinase [Francisella novicida GA99-3549]
 gi|151571600|gb|EDN37254.1| hypothetical protein FTDG_00034 [Francisella novicida GA99-3548]
          Length = 306

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 171/296 (57%), Gaps = 12/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI-IQSSSP--IFTLSPP 75
            +AIG+FDG+HLGH  I+++ + IAN + +   +L F P P+   ++  +P  I+     
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIANENNLVPYILFFEPLPKEFFLKDKAPLRIYDFRNK 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I    + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R G
Sbjct: 77  VIN---IHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S 
Sbjct: 134 DYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +    
Sbjct: 193 VIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 250 NLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|317486444|ref|ZP_07945270.1| riboflavin biosynthesis protein RibF [Bilophila wadsworthia 3_1_6]
 gi|316922300|gb|EFV43560.1| riboflavin biosynthesis protein RibF [Bilophila wadsworthia 3_1_6]
          Length = 333

 Score =  181 bits (460), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 173/314 (55%), Gaps = 24/314 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V +GNFDG+HLGH  +L    +   A  +    ++FNPHP  ++   +P   L+ P
Sbjct: 20  QGTSVTVGNFDGVHLGHQALLAMTCERAAATGTLPVAMTFNPHPLEVLTPYAPP-RLTTP 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LE  G + ++   FT E A  S E F++++L+  L ++ ++ G  F  GK RAG
Sbjct: 79  QARLALLEASGMALVMLVVFTSEFAAMSPETFVRRILLGTLNMRELLLGYDFTLGKGRAG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L + G+  GF+   +D L +   ++VSS+ IR  L +G V  A+ LLG  ++++ +
Sbjct: 139 TPEVLAQLGKAEGFNVDRMDAL-SVHDEVVSSTRIRELLHQGQVWEASSLLGRLYSVQGE 197

Query: 196 VIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG-------------- 240
           VIHG+ + GR LGFPTAN+  +P +L K GVY +   T  +++ SG              
Sbjct: 198 VIHGKNRGGRLLGFPTANLAPTPTMLPKPGVY-VTLATPSESAGSGLPFVFDPAHPTPNT 256

Query: 241 ---VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              V N G NPT  P G L +E+ + DF  ++YG+   V+F + LR E+ F   + L   
Sbjct: 257 YPAVTNIGYNPTFGP-GALTVETHLLDFDADLYGKHLEVAFVERLRGEVTFTGPDSLVAQ 315

Query: 298 MGEDEKKARKILES 311
           + +D  +ARKILE+
Sbjct: 316 IKKDADQARKILET 329


>gi|167856255|ref|ZP_02478988.1| riboflavin biosynthesis protein [Haemophilus parasuis 29755]
 gi|167852612|gb|EDS23893.1| riboflavin biosynthesis protein [Haemophilus parasuis 29755]
          Length = 325

 Score =  181 bits (460), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 170/302 (56%), Gaps = 23/302 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V+ IGNFDG+HLGH  IL++ ++ AN    P  V+ F P PR           L+ P
Sbjct: 28  KGCVLTIGNFDGVHLGHQQILKRLLEKANALRLPSVVMIFEPQPREFFAKKQD--KLTAP 85

Query: 76  S----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           +    +++KI  L+++GF  L+  +F  + A    EQFIQ +LV+ L VK +  G  F+F
Sbjct: 86  ARLMRLRDKIHALQEIGFDYLLCVRFNAQFAQLQPEQFIQHLLVDKLNVKYLSVGDDFQF 145

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKGHVLNAAH 184
           G  R+G    LQ+ G+++GF      ++ N+ S     Q +SSS IR AL   ++  A  
Sbjct: 146 GYKRSGTFDSLQQAGKQFGF------DVENSHSHCLEQQRISSSLIRDALHNDNLQLAEK 199

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  + I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++ +T     ++ +AN 
Sbjct: 200 MLGKPYAICGRVAHGNKLGRTIGFPTANLMLNRLVTAIQGVYAVKVKTSAGI-FNSIANV 258

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+    P LLE  +FDF   IYGQ   V F   +R EIKF   ++LK+ + +D + 
Sbjct: 259 GNRPTINGTKP-LLEVHLFDFDNSIYGQAIEVRFLKKVRSEIKFASFDELKLQIEKDVQA 317

Query: 305 AR 306
            R
Sbjct: 318 VR 319


>gi|75914664|gb|ABA29749.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  181 bits (460), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I +F +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILNFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|326402806|ref|YP_004282887.1| flavokinase/FAD synthetase [Acidiphilium multivorum AIU301]
 gi|325049667|dbj|BAJ80005.1| flavokinase/FAD synthetase [Acidiphilium multivorum AIU301]
          Length = 309

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           + VFH+      +P   +G  VA+GNFDG+H GH  +L  A     ++P   L+F PHPR
Sbjct: 2   IRVFHDW---SGIPPEARGASVALGNFDGMHRGHVEVLRAAHAARPDAPRAALTFAPHPR 58

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +   P F L   + +   LE  G   L    F    +  SAE FI++VL   +    
Sbjct: 59  EFFRPDDPPFRLMLEAERAAALEAEGIEILYELTFDRAFSLLSAEAFIEEVLDRGIGAAH 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FG  R GD  +L+   E  G     +  L + +  I SSS IR  L  G+  
Sbjct: 119 LACGADFAFGHRRGGDVAMLRAAAEARGIGLSIVPHLDDAEGPI-SSSRIRRLLQDGYPE 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG    I   V HG+  GRT+GFPTAN+ L   +    GVYA+  R  D     G
Sbjct: 178 RAAALLGRPHAIRGVVAHGDARGRTIGFPTANVALGRHLEPARGVYAVTVRLADGRMVKG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN GR PT+       LE+ +FDFS ++YGQ  TVS   ++R E +F   ++L+  +  
Sbjct: 238 VANIGRRPTVAEGAISRLEAHLFDFSGDLYGQEITVSLHRFIRDERRFASFDELRAQIAA 297

Query: 301 DEKKARKILES 311
           D  +AR++L +
Sbjct: 298 DADEARRLLST 308


>gi|315634926|ref|ZP_07890208.1| riboflavin biosynthesis protein RibF [Aggregatibacter segnis ATCC
           33393]
 gi|315476478|gb|EFU67228.1| riboflavin biosynthesis protein RibF [Aggregatibacter segnis ATCC
           33393]
          Length = 312

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 169/312 (54%), Gaps = 16/312 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +LP +L    + IGNFDG+HLGH  IL      A+  + P+ V+ F P PR    + +  
Sbjct: 9   NLPQNLHTCALTIGNFDGVHLGHQAILRHLRTKADELHLPMVVMLFEPQPREYFCAENAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     + + L++ G   +I  KF    A+  A+QFI+  LV  L VK +  G  F+F
Sbjct: 69  ARLMRLRDKLRYLKQAGVDMVIVAKFDRTFADLPAQQFIEDWLVRKLNVKFLSIGDDFKF 128

Query: 130 GKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           G  R G+  +LQ+ GEK+GF      +  +D LR      +SS+ IR AL    +  A  
Sbjct: 129 GAKRQGNFVLLQQAGEKFGFTVEDNRSFCLDALR------ISSTAIREALANDDLTLAEK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  + I   VIHG ++GRT+GFPTAN++L   +   +GVYA+R R +    ++GVAN 
Sbjct: 183 LLGRPYRILGRVIHGNELGRTIGFPTANIRLHRQVNPVKGVYAVRVRLKSGAFFNGVANI 242

Query: 245 GRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G  PT+  NG   LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  + +D +
Sbjct: 243 GTRPTI--NGVNQLLEAHLFDFQGDLYGQWLDVELCHKIRNEMKFPSFDDLKAQIAKDVE 300

Query: 304 KARKILESSYPL 315
            A+ + ++   L
Sbjct: 301 TAKNVFKTDRTL 312


>gi|148259599|ref|YP_001233726.1| riboflavin biosynthesis protein RibF [Acidiphilium cryptum JF-5]
 gi|146401280|gb|ABQ29807.1| FMN adenylyltransferase / riboflavin kinase [Acidiphilium cryptum
           JF-5]
          Length = 309

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           + VFH+      +P   +G  VA+GNFDG+H GH  +L  A     ++P   L+F PHPR
Sbjct: 2   IRVFHDW---SGIPPEARGASVALGNFDGMHRGHVEVLRAAHAARPDAPRAALTFAPHPR 58

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +   P F L   + +   LE  G   L    F    +  SAE FI++VL   +    
Sbjct: 59  EFFRPDDPPFRLMLEAERAAALEAEGIEILYELTFDRAFSLLSAEAFIEEVLDRGIGAAH 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FG  R GD  +L+   E  G     +  L + +  I SSS IR  L  G+  
Sbjct: 119 LACGADFAFGHRRGGDVAMLRAAAEARGIGLSIVPHLDDAEGPI-SSSRIRRLLQDGYPE 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG    I   V HG+  GRT+GFPTAN+ L   +    GVYA+  R  D     G
Sbjct: 178 RAAALLGRPHAIRGVVAHGDARGRTIGFPTANVALGRHLEPARGVYAVTVRLADGRMVKG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN GR PT+       LE+ +FDFS ++YGQ  TVS   ++R E +F   ++L+  +  
Sbjct: 238 VANIGRRPTVAEGAISRLEAHLFDFSGDLYGQEITVSLHRFIRDERRFASFDELRAQIAA 297

Query: 301 DEKKARKILES 311
           D  +AR++L +
Sbjct: 298 DADEARRLLAT 308


>gi|149280010|ref|ZP_01886135.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter
           sp. BAL39]
 gi|149229207|gb|EDM34601.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter
           sp. BAL39]
          Length = 311

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 174/294 (59%), Gaps = 12/294 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV IG FDG+H GH  I+++  ++A  +N    +L+F PHPR II   +    L  
Sbjct: 13  LDHAVVTIGTFDGVHFGHQKIIKRLCELAKASNGESVILTFFPHPRMIIDPENQDLKLIN 72

Query: 75  PSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            +I EK  ILE +G   LI   FT + +N S  ++I+ +LV+ + VK +I G   RFGKD
Sbjct: 73  -TIAEKASILEGLGVDHLIITPFTRDFSNLSPAEYIKNILVDTIGVKELIVGYDHRFGKD 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G    L++  + +G+    I E ++     VSS+ IR +L  G V  A+H LGY F++
Sbjct: 132 RKGGMPELEEFSDPFGYSIEVIPE-QDIDDVAVSSTKIRQSLLNGAVGQASHYLGYDFSM 190

Query: 193 ESDVIHGEKIGRTLGFPTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              VI G+KIGRT+G+PTAN  ++ +  ++  +G+YA+    ++   Y G+A  G+ PT+
Sbjct: 191 YGRVIKGDKIGRTIGYPTANIFIEETYKLIPSDGIYAVTVEMEEGI-YKGMAYIGQRPTI 249

Query: 251 VPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             NG    +E  IFDF +EIYGQ  T+ F ++LR ++KF  +E LKI + +D++
Sbjct: 250 --NGMTRNIEVNIFDFDKEIYGQYITMHFLEFLRHDVKFSGLEALKIQLKKDKE 301


>gi|310641600|ref|YP_003946358.1| riboflavin biosynthesis protein ribf [Paenibacillus polymyxa SC2]
 gi|309246550|gb|ADO56117.1| Riboflavin biosynthesis protein RibF [Paenibacillus polymyxa SC2]
          Length = 312

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/296 (38%), Positives = 169/296 (57%), Gaps = 14/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+HLGH  ++ +A+ +A     P++V++F+PHP+ +++       L+P + +
Sbjct: 23  VTAIGQFDGLHLGHASVIRKAVALAREQKVPVSVMTFHPHPKEVMKKGDYEGYLTPLADK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + IL  MG   L    F  E +  S E FI  VL+  L++ T + G  FRFG   AG   
Sbjct: 83  QTILSDMGVDVLYILSFNEEFSKVSPEAFITDVLLP-LQILTAVVGFDFRFGHRGAGHED 141

Query: 139 ILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L+K  GE    +TV   EL  +K   VSSS IR AL  G + +A+  LG  + I+  V+
Sbjct: 142 TLRKLGGELMSVYTVPPFELDGDK---VSSSGIRRALQTGDLAHASRWLGRPYRIQGTVM 198

Query: 198 HGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            GEK GRT+GFPTAN++L    ++  +GVYA+R    D    +GV N G  PT   +  +
Sbjct: 199 DGEKRGRTIGFPTANLKLDDSYVIPVKGVYAVRALIGDHW-INGVMNVGVKPTF--HEGV 255

Query: 257 LLESF---IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           L  SF   +FDF+Q+IYG+   V    Y+RPE KF  +E+L   +G D + A+K+L
Sbjct: 256 LNPSFEVHLFDFNQQIYGESVLVELHHYIRPERKFSSVEELISQIGNDAQTAKKLL 311


>gi|15839010|ref|NP_299698.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa 9a5c]
 gi|9107607|gb|AAF85218.1|AE004051_2 riboflavin biosynthesis protein [Xylella fastidiosa 9a5c]
          Length = 315

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 168/309 (54%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  +I S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERI-SATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALS-GIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F DI+ +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDIQSMTTQIHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAQQARHIL 306


>gi|284035722|ref|YP_003385652.1| riboflavin biosynthesis protein RibF [Spirosoma linguale DSM 74]
 gi|283815015|gb|ADB36853.1| riboflavin biosynthesis protein RibF [Spirosoma linguale DSM 74]
          Length = 309

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 14/317 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++  ++  Q LPN     VV  G FDG+H GH +IL +  ++A  S     ++++ PH
Sbjct: 1   MIIYQGLDDIQPLPN----AVVTSGTFDGVHRGHQIILSRLTEVAQASGGESVLITYWPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PRT++ + S    L   +++EKI  L++ G   L+   FT   +  ++E++I+++L++ +
Sbjct: 57  PRTVVSNDSQNLKLLT-TLEEKIELLDQAGVEHLVVIPFTRSFSELTSEEYIRQILLDKI 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G   RFG+DR G    +Q    +YGF    I   ++ ++  VSSS IR AL +
Sbjct: 116 GTKKLVIGYDHRFGRDREGGFDYIQAHQSEYGFEVEEIPR-QDVEAVGVSSSKIRAALNE 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQD 234
           G+V  A   LG  + +   ++ G ++GRT+GFPTANMQ+     ++   GVYA+      
Sbjct: 175 GNVHTANLFLGRPYNLTGTIVKGRQLGRTIGFPTANMQVDDPAKLIPANGVYAVDVEYAG 234

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           QT   G+ N G  PT V      +E++IFDF ++IYG+  T+ F ++LRPE KF+ +  L
Sbjct: 235 QT-LGGMLNIGFRPT-VAGTHQTIETYIFDFDKDIYGEHMTLRFREFLRPEQKFEGLPAL 292

Query: 295 KIYMGEDEKKARKILES 311
              +  DE+ ARK+L S
Sbjct: 293 VAQLKRDEEAARKVLGS 309


>gi|89255847|ref|YP_513209.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314334|ref|YP_763057.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156501827|ref|YP_001427892.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010069|ref|ZP_02275000.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367208|ref|ZP_04983238.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           holarctica 257]
 gi|290954401|ref|ZP_06559022.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312178|ref|ZP_06802983.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143678|emb|CAJ78877.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129233|gb|ABI82420.1| riboflavin kinase [Francisella tularensis subsp. holarctica OSU18]
 gi|134253028|gb|EBA52122.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           holarctica 257]
 gi|156252430|gb|ABU60936.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 306

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 77  VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 137 LLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 196 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGNRPT-IDGKNNLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 253 ETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|84686163|ref|ZP_01014058.1| riboflavin biosynthesis protein RibF [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665690|gb|EAQ12165.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           HTCC2654]
          Length = 312

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 7/300 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  VAIGNFDG+H GH  +++ A + A   ++P+ V++F PHPR         F L   
Sbjct: 15  RGASVAIGNFDGVHRGHQFVIDIARREATALSAPLGVMTFEPHPREYFAPGGDPFRLMNA 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L+ +G   L    F    +  + E F ++V+V+ L ++ V+ G  F FG  RAG
Sbjct: 75  EARANRLDWLGVEKLYELTFNDTLSALTPEDFARRVIVDGLGLRHVVVGADFHFGAKRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L   G++ GF  V +  L ++    +SS+ IR AL++G   +AA +LG+   I+  
Sbjct: 135 NVDTLVALGQEMGF-GVTVAPLMHDDDVEISSTAIRQALSEGRPRDAARMLGHWHRIDGT 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQTSYSGVANFGRNPTMVP 252
           V+ G++ GR LG+PT NM ++     K GVYA++           Y G A+ G  PT   
Sbjct: 194 VVRGDQRGRDLGYPTINMSIAGLHPPKFGVYAVKADVLTGPHAGEYGGAASIGVRPTFGE 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           N P  +E+F+FDF  ++YG+  +V+  DYLRPE +F  ++ L   M +D  KAR +L ++
Sbjct: 254 NLP-NIETFLFDFKGDLYGEHISVALVDYLRPEERFDSLDALIEQMDDDCAKARAVLAAT 312


>gi|113971293|ref|YP_735086.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. MR-4]
 gi|117921575|ref|YP_870767.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. ANA-3]
 gi|113885977|gb|ABI40029.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. MR-4]
 gi|117613907|gb|ABK49361.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. ANA-3]
          Length = 311

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 12/307 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L VK ++
Sbjct: 62  FRGENAPARLSLLRDKIILLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L + G +YGF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFEMLMQAGARYGF-TVVSTQSFMVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWDESDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298

Query: 302 EKKARKI 308
             +AR +
Sbjct: 299 ANEARAL 305


>gi|260581956|ref|ZP_05849752.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae NT127]
 gi|260095149|gb|EEW79041.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae NT127]
          Length = 312

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 170/302 (56%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 136 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 193 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 252

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F+  +R EIKF   + LK+ + +D + A+   
Sbjct: 253 --NGLMQLLEVHLFDFSQNIYGQMVEVEFYHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 310

Query: 310 ES 311
            S
Sbjct: 311 NS 312


>gi|68166038|gb|AAY87953.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
 gi|68166040|gb|AAY87954.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
 gi|68166042|gb|AAY87955.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++     G   V I + +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYAN--GRFDVTIVDKQTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|319775101|ref|YP_004137589.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3047]
 gi|317449692|emb|CBY85899.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3047]
          Length = 308

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 170/302 (56%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+  L
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFL 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|114048531|ref|YP_739081.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp. MR-7]
 gi|113889973|gb|ABI44024.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp. MR-7]
          Length = 311

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 12/307 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVVANLVQKAKQLSLPPTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L VK ++
Sbjct: 62  FRGENAPARLSLLRDKIILLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L + G +YGF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFEMLMQAGARYGF-TVVSTQSFMVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWDESDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298

Query: 302 EKKARKI 308
             +AR +
Sbjct: 299 ANEARAL 305


>gi|126661618|ref|ZP_01732645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cyanothece
           sp. CCY0110]
 gi|126617097|gb|EAZ87939.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cyanothece
           sp. CCY0110]
          Length = 306

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
           +  S  N +    +A+GNFDGIHLGH  +L+  +++      T+++F PHP+      + 
Sbjct: 3   VTSSTNNVITPTAIALGNFDGIHLGHRQVLKPILELQKQYTPTIVTFTPHPQEYFSGQTR 62

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P + + K+LE +    L+R  F    A+ S + F++ +LV+ L  K +  G  FR
Sbjct: 63  QL-LTPLTEKVKLLESLNIRQLVRLPFDRSLASLSPQAFVEDILVKQLNAKYISVGQDFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFH---TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           FGK RAG+  +LQ+  +K+G     T     L  + S  +SSS IR  L  G+V  A  +
Sbjct: 122 FGKGRAGNAQMLQELAQKFGVFVHITKLQTCLNEDNSLRISSSRIRQYLATGNVRQAKEM 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LGY +++E  V+ G+++GRT+GFPTAN+Q+  + LL + GVY +R     +    GV N 
Sbjct: 182 LGYPYSLEGIVVKGQQVGRTIGFPTANLQVPLNKLLPRRGVYCVRAFLTTEEVIKGVINI 241

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+    P  +E  + D+S  +YG    V    +LR E KF  ++ LK  + +D   
Sbjct: 242 GSRPTVNGQVP-TVEVHLLDWSGNLYGTFVRVDLEKFLRSEQKFPSLDALKNQIKQDCIV 300

Query: 305 ARKIL 309
           AR+IL
Sbjct: 301 ARQIL 305


>gi|295132329|ref|YP_003583005.1| riboflavin kinase / FAD synthetase [Zunongwangia profunda SM-A87]
 gi|294980344|gb|ADF50809.1| riboflavin kinase / FAD synthetase [Zunongwangia profunda SM-A87]
          Length = 312

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 178/302 (58%), Gaps = 11/302 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG FDG+H GH  I+++ +  A  NN    +L+F PHPR ++Q  S I  ++  
Sbjct: 14  KPTVVTIGTFDGVHAGHQKIIKRLVDSARANNLESVILTFFPHPRMVLQKESGIKLINTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  ILE+ G   L+ + FT++ +  +A +F++++LVE L  K VI G   RFG++R  
Sbjct: 74  EERTDILEQSGIDHLVIHPFTMQFSRLTAREFVKEILVEKLRAKKVIIGYDHRFGRNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDEL-RNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +   L+K GE++ F    ++E+ R +  ++ VSS+ IRTAL +G V  A + L + F+++
Sbjct: 134 NINDLKKFGEEFDFE---VEEITRQDIEEVAVSSTKIRTALEEGRVEKANNYLRHPFSLK 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
            +V+ G  +G+   +PTAN+ ++ D  L  K GVY +R   + +T Y G+ + G NPT V
Sbjct: 191 GEVVKGRGLGKEFNYPTANINIAEDYKLIPKNGVYVVRSVIEGET-YFGMMSIGTNPT-V 248

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 +ESF F   +++YG+R  +     +R E KF  +E+LK+ M +DE  +++ ++ 
Sbjct: 249 GGTSRTIESFFFKLDKDLYGKRLKIDLLIRIRDEKKFNSVEELKLAMKQDEAFSKQYIKD 308

Query: 312 SY 313
           +Y
Sbjct: 309 NY 310


>gi|329903781|ref|ZP_08273613.1| Riboflavin kinase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548212|gb|EGF32914.1| Riboflavin kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 325

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 170/328 (51%), Gaps = 16/328 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPR 60
           +++ + LPN       A  IGNFDG+HLGH  +L    E A K+  +S   V++F PHPR
Sbjct: 1   MKVFRGLPNAAARAPCALTIGNFDGVHLGHQSLLARVSEAAGKLGLDS--AVMTFEPHPR 58

Query: 61  TIIQSSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
                       +P  I       + L + G   +I   F    A  + + FI+ +LV+ 
Sbjct: 59  EYFARVQGDPAKAPARIANLRDKLRSLHQAGIDRVIVQHFNAHFAALTPDDFIRHILVDG 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L VK ++ G  F FG  RAG+  +L + G++YGFH   +  +R++ ++I SSS IR AL 
Sbjct: 119 LHVKWLMVGEDFCFGARRAGNVALLIEAGQRYGFHVETLPTVRHDGTRI-SSSAIRDALH 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G+   A  +LG+ + +   VIHG+K+GRT+GFPT N+ ++       G+Y ++      
Sbjct: 178 AGNFAQAHQMLGHPYAMSGHVIHGKKLGRTIGFPTLNLAVTHKHPALSGIYVVQVHGLAD 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVA+ G  PT+  +G +LLE+ +FDF+   YG+   + F   LR E K+ D+  L 
Sbjct: 238 QPLPGVASIGVRPTVDDSGRVLLETHVFDFAANCYGKLIRIEFLKKLRSEEKYTDLPSLT 297

Query: 296 IYMGEDEKKARKILE--SSYPLSERDRI 321
             +  D   AR      S+  LS  DRI
Sbjct: 298 AAIANDASNARDYFRDASAVALSATDRI 325


>gi|329122985|ref|ZP_08251556.1| riboflavin biosynthesis protein RibF [Haemophilus aegyptius ATCC
           11116]
 gi|327471916|gb|EGF17356.1| riboflavin biosynthesis protein RibF [Haemophilus aegyptius ATCC
           11116]
          Length = 312

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 170/302 (56%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 136 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 193 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 252

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+  L
Sbjct: 253 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFL 310

Query: 310 ES 311
            S
Sbjct: 311 NS 312


>gi|217964524|ref|YP_002350202.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes HCC23]
 gi|217333794|gb|ACK39588.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes HCC23]
 gi|307570910|emb|CAR84089.1| riboflavin biosynthesis protein [Listeria monocytogenes L99]
          Length = 314

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +  G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYAD--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|322420007|ref|YP_004199230.1| riboflavin biosynthesis protein RibF [Geobacter sp. M18]
 gi|320126394|gb|ADW13954.1| riboflavin biosynthesis protein RibF [Geobacter sp. M18]
          Length = 331

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 169/298 (56%), Gaps = 9/298 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+HLGH  I  +  ++A  +     V++F PHP  ++ +   +  ++    +E
Sbjct: 19  VTIGNFDGVHLGHREIFRRVRELARETGGVSVVVTFVPHPLKVVSAHREVRLITTSREKE 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ++E  G   L+   F    A   A +F+++VLV+ + V+ ++ G  + FG+ R GD G+
Sbjct: 79  ALIEGSGIDYLLEIPFDRAFAAVPAAEFVERVLVDAIGVERLVIGYDYAFGRGREGDVGL 138

Query: 140 LQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+  G+++G+    ++EL+  ++ S + SS+ +R  ++ G V  A+ +LG  F I   V+
Sbjct: 139 LRDLGKRFGYT---VEELQPISDGSTVYSSTAVRRMVSAGDVAGASLVLGRHFAITGKVV 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG + GR LGFPTAN++   D++   GVYA++    +Q    G  N G NPT   N  L 
Sbjct: 196 HGHERGRGLGFPTANIETDKDLIPSAGVYAVKVCLGEQL-LDGACNIGANPTF-GNARLS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           +E F+ DF  ++YG+  T+ F + LR E +F  + +LK  +  D  + R+IL+ + P+
Sbjct: 254 IEVFLLDFDADLYGREITLFFIERLRGEKRFAGLGELKDAIAADVVRCREILKDARPV 311


>gi|54066453|gb|AAV28537.1| riboflavin kinase and FAD synthase-like [Listeria welshimeri]
          Length = 313

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 20  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 79

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 80  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++     G   V I + +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 139 ADLERYAN--GRFDVTIVDKQTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 197 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 255

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 256 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 305


>gi|116872760|ref|YP_849541.1| riboflavin biosynthesis protein RibF [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116741638|emb|CAK20762.1| riboflavin biosynthesis protein RibF [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 314

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 169/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++     G   V I + +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYAN--GRFDVTIVDKQTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF  EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHWEIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|332305531|ref|YP_004433382.1| riboflavin biosynthesis protein RibF [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172860|gb|AEE22114.1| riboflavin biosynthesis protein RibF [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 312

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 169/301 (56%), Gaps = 7/301 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +L +  +G V+ IG FDG+HLGH  +L Q +  A     P TV+ F P P  +    +  
Sbjct: 13  NLRDRHRGCVLTIGKFDGVHLGHQAVLSQLVVKARELGLPATVMVFEPQPEELFTPDNAP 72

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             LS    +   L+ +G   L+  KF    A+++AEQF++++LVE L V+ ++ G  FRF
Sbjct: 73  ARLSLLRDKYVQLKALGVDRLLCLKFDKRFASFTAEQFVEQLLVEDLGVQFLVVGDDFRF 132

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK R G+  +LQ  G+K GF  V     R +  +I SS+ +R AL++ +   A  +LG  
Sbjct: 133 GKGRVGNFAMLQAEGQKCGFSVVSTQSFRLDDYRI-SSTEVRKALSEDNFTLAEKMLGRP 191

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           FTI   V+HG+K GRT+GFPTAN+ L        GV+A++      T YSGVAN G  PT
Sbjct: 192 FTISGKVLHGDKKGRTIGFPTANLLLKRCNAPINGVFAVQVDIAG-TIYSGVANIGTRPT 250

Query: 250 MVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +  NG    LE  IF F+  +YG+  +V+    LR EIKF   E+L   +  D ++A+++
Sbjct: 251 V--NGQRSQLEVHIFHFTGNLYGRFISVAIRAKLRNEIKFDSFEQLHQQILRDAEQAKQL 308

Query: 309 L 309
           L
Sbjct: 309 L 309


>gi|319425457|gb|ADV53531.1| riboflavin biosynthesis protein RibF [Shewanella putrefaciens 200]
          Length = 311

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 170/308 (55%), Gaps = 12/308 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRAFASQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L   GE++GF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFDMLMHAGERFGF-TVVSTQSFIVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHSFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKKQILND 298

Query: 302 EKKARKIL 309
             +AR + 
Sbjct: 299 ANEARALF 306


>gi|46912218|emb|CAG19013.1| putative FAD synthase [Photobacterium profundum SS9]
          Length = 306

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 163/304 (53%), Gaps = 12/304 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+HLGH  +L Q I  A +   P TV++F P P  +  + +    L+    +
Sbjct: 1   MLTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQPLELFAADNAPARLTRFRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              L+K G   L+   F  + AN SAE F++++LVE L VK ++ G  FRFGK R G+  
Sbjct: 61  YTQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGVKFLVVGDDFRFGKGRRGNFE 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  G+++GF  V          Q VSS+ IR AL    +  AA +LG  ++I   V H
Sbjct: 121 MLEAAGQEFGFVVVSTQSF-CMLEQRVSSTAIRHALVNDQLPLAASMLGRSYSISGRVSH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           G K+GRT+GFPTAN+ L   +    GVYA+     D     GVAN G  PT+  NG    
Sbjct: 180 GRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVFGVDGAPLPGVANVGHRPTV--NGVRQQ 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           LE  +FDF  ++YG +  V     LR EIKF+  + LK  +  D + AR        LSE
Sbjct: 238 LEVHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQIERDAQTAR------VWLSE 291

Query: 318 RDRI 321
           R+ +
Sbjct: 292 RNNV 295


>gi|119897497|ref|YP_932710.1| riboflavin kinase/FMN adenylyltransferase [Azoarcus sp. BH72]
 gi|119669910|emb|CAL93823.1| riboflavin kinase / FMN adenylyltransferase [Azoarcus sp. BH72]
          Length = 332

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 162/311 (52%), Gaps = 9/311 (2%)

Query: 7   IEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++++ +P+H   +  V+ IGNFDG+H GH  +L+     A     P  VL+F PHPR  
Sbjct: 1   MQVSRGIPDHAARQPSVLTIGNFDGVHRGHQALLKLLTDKARALGLPAVVLTFEPHPREY 60

Query: 63  IQSSSPIFTLSPPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               +    L+  S++EK+L     G   +   +F    A  S   FI  +LV  L V+ 
Sbjct: 61  FAPDAAPARLA--SLREKLLLLAAAGVDRVHVCRFDARLAQLSPTAFIDDLLVRGLGVRH 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  FRFG  RAGD  +LQ+ G  +GF    +  L + + + VSSS +R AL  G + 
Sbjct: 119 LYIGDDFRFGARRAGDFAMLQQAGAAHGFAVESMATL-DVEGERVSSSAVRAALADGDMA 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LLG  ++I   VIHG+KIGR +G+PTAN+Q+        GVYA+R          G
Sbjct: 178 HAERLLGRPYSIAGRVIHGDKIGRRIGYPTANVQMKHRKPPFTGVYAVRVEGLTDGLVDG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA+ G  PT+   G L LE  +FD++ + YG    V F   LR E +F  ++ L   +G 
Sbjct: 238 VASMGIRPTINSAGSLRLEVNLFDWNSDCYGAHLRVHFLHRLRGEARFDSLDALTAQIGR 297

Query: 301 DEKKARKILES 311
           D   AR  L +
Sbjct: 298 DADDARAWLAA 308


>gi|134302193|ref|YP_001122162.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254368675|ref|ZP_04984689.1| hypothetical protein FTAG_01696 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|134049970|gb|ABO47041.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|157121590|gb|EDO65767.1| hypothetical protein FTAG_01696 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 306

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 77  VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 137 LLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 196 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKNNLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 253 ETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|119717411|ref|YP_924376.1| riboflavin kinase / FMN adenylyltransferase [Nocardioides sp.
           JS614]
 gi|119538072|gb|ABL82689.1| riboflavin kinase / FMN adenylyltransferase [Nocardioides sp.
           JS614]
          Length = 310

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPH 58
           M ++ ++E    +P+ L    V IGNFDG+HLGH  ++ +A + A    +TV++  F PH
Sbjct: 1   MQIWRSLE---EVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++      TL+   I+ ++L   G  A++   F    A ++ E+F+++VLV+ L  
Sbjct: 58  PMAVLRPEHAPTTLTSLEIRAELLADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD   L++ GE++GF    I    +   Q+ SS+ +R +L  G 
Sbjct: 118 AVVVVGANFRFGNKAAGDVATLRQAGERHGFEAEGI--ALDGGPQVWSSTYVRMSLAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ-T 236
           V  AA  LG  + +   V+ G++ GR LGFPTAN+       +  +GVYA R R  D   
Sbjct: 176 VAGAAEALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGE 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           ++    + G NPT        +E+++ D +  ++YG    VSF D LR  + F+ I+KL 
Sbjct: 236 TFPAAISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLV 295

Query: 296 IYMGEDEKKARKIL 309
             M +D  +AR++L
Sbjct: 296 AQMNDDVDRARELL 309


>gi|120599902|ref|YP_964476.1| riboflavin biosynthesis protein RibF [Shewanella sp. W3-18-1]
 gi|120559995|gb|ABM25922.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp.
           W3-18-1]
          Length = 311

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 170/308 (55%), Gaps = 12/308 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRAFASQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L   GE++GF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFDMLMHAGERFGF-TVVSTQSFIVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKKQILND 298

Query: 302 EKKARKIL 309
             +AR + 
Sbjct: 299 ANEARALF 306


>gi|146292161|ref|YP_001182585.1| riboflavin biosynthesis protein RibF [Shewanella putrefaciens
           CN-32]
 gi|145563851|gb|ABP74786.1| FMN adenylyltransferase / riboflavin kinase [Shewanella
           putrefaciens CN-32]
          Length = 311

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 170/308 (55%), Gaps = 12/308 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P TV++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRTFASQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L   GE++GF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFDMLMHAGERFGF-TVVSTQSFIVGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKKQILND 298

Query: 302 EKKARKIL 309
             +AR + 
Sbjct: 299 ANEARALF 306


>gi|331000982|ref|ZP_08324618.1| riboflavin biosynthesis protein RibF [Parasutterella
           excrementihominis YIT 11859]
 gi|329569757|gb|EGG51521.1| riboflavin biosynthesis protein RibF [Parasutterella
           excrementihominis YIT 11859]
          Length = 315

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 167/297 (56%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            VAIGNFDG+H GH  +L + ++ A+   +   VL+F PHPR           +S  S+ 
Sbjct: 18  AVAIGNFDGVHRGHQALLHEVVEAAHARLLCPAVLTFEPHPREFFNPEDAPRRIS--SLH 75

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +K+  +E  G   +   +F    A+ S   F++++LV+ L  + V  G  FRFG  RAGD
Sbjct: 76  DKVEAIEACGIQRVYILRFNEHLASLSPCDFVKEILVDGLHARWVTVGENFRFGDKRAGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ G+++ F    +  L +  + I SSS IR AL +G +  A ++LG  + I   V
Sbjct: 136 IKLLEQLGKEFHFEVHPMPMLFHTHAPI-SSSRIRHALAEGDIPTANYMLGRPYMISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLK---EGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           +HG+++GRTLGFPT N + L P    K   EGVYA++          GVA  GR PT+  
Sbjct: 195 LHGKQLGRTLGFPTINQRILPPHSKAKPAIEGVYAVKAHGIGPRPIEGVACVGRRPTVDD 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +G  LLE+ +F+F  ++Y Q   V FF  +R E KF  +E+L+  + +D+ KA++IL
Sbjct: 255 HGEYLLETHLFNFHGDLYDQDVKVEFFSKIRDEKKFCSLEELRAAIADDQLKAKQIL 311


>gi|145634140|ref|ZP_01789851.1| hypothetical protein CGSHiAA_08850 [Haemophilus influenzae PittAA]
 gi|148826386|ref|YP_001291139.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittEE]
 gi|229846023|ref|ZP_04466135.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 7P49H1]
 gi|145268584|gb|EDK08577.1| hypothetical protein CGSHiAA_08850 [Haemophilus influenzae PittAA]
 gi|148716546|gb|ABQ98756.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittEE]
 gi|229811027|gb|EEP46744.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 7P49H1]
          Length = 308

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 167/305 (54%), Gaps = 20/305 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGENAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           R G+  +LQ   +++GF      +  +DE R      +SS+ IR AL    +  A +LLG
Sbjct: 132 RQGNFAMLQAASKRFGFIVEDNRSFCLDEQR------ISSTAIREALANDDLQLAENLLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ 
Sbjct: 186 KPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKR 245

Query: 248 PTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT+  NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+
Sbjct: 246 PTI--NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAK 303

Query: 307 KILES 311
               S
Sbjct: 304 AFFNS 308


>gi|94267065|ref|ZP_01290705.1| Riboflavin kinase / FAD synthetase [delta proteobacterium MLMS-1]
 gi|93452222|gb|EAT02876.1| Riboflavin kinase / FAD synthetase [delta proteobacterium MLMS-1]
          Length = 321

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 171/316 (54%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           MH+  ++    S+ + L    V IGNFDG+HLGH  +     ++A  +      ++F PH
Sbjct: 1   MHIHRSL---ASITDPLPYACVTIGNFDGVHLGHQQLFHTVSQLARQHQGTAVAITFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     I  +S P  + +++E+ G   L+   FT E A+ +AE+F+ +VLV  L V
Sbjct: 58  PLQVVCPEKGIKLISNPEQKIELIEQAGVDELLILPFTKELASMAAEEFVDRVLVATLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FG+ R GD   L+ RG K GF    I   +     +VSSS +R  +T G 
Sbjct: 118 KELVVGYDYAFGRGRRGDPEFLKARGVKQGFRVEVIPAFQVC-GMVVSSSKVRELVTAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
           +     LLG  + +   V  G++ G + LGFPTAN+ L+  D+  K GVY  +    D  
Sbjct: 177 MEEVTCLLGRYYQLRGVVQEGKRRGGSILGFPTANLTLNENDLCPKHGVYVTQV-IYDGK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   +G L  E+ IFDF+Q+IYG+   ++   +LRPE +F   E+L  
Sbjct: 236 CYGGVLNIGYNPTFA-DGKLAAETHIFDFNQDIYGKPIKLNLLKHLRPERRFAGPEELAA 294

Query: 297 YMGEDEKKARKILESS 312
            + +D  +A+K+L ++
Sbjct: 295 QIAKDTTEAQKVLAAA 310


>gi|315648090|ref|ZP_07901191.1| riboflavin biosynthesis protein RibF [Paenibacillus vortex V453]
 gi|315276736|gb|EFU40079.1| riboflavin biosynthesis protein RibF [Paenibacillus vortex V453]
          Length = 317

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 165/297 (55%), Gaps = 8/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+HLGH  +L  A+ IA  N  P  +++F PHP+ +I   S    L+P   +
Sbjct: 23  VAAIGQFDGLHLGHASVLSTAVNIARDNGVPAALITFYPHPKDVIGKGSYEGYLTPQPDK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++LE+MG   L   +F  E +  S E F++++L+  L ++T + G  FRFG   AGD  
Sbjct: 83  QQLLEEMGIDILYIVEFNKEFSQVSPETFVEEMLLP-LNLQTAVVGFDFRFGHKGAGDAV 141

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ+ GE  G  TV          + V SS+IR AL  G + +A    G  + I   VIH
Sbjct: 142 KLQELGE--GRMTVVTVPPFLVDGEKVGSSSIRIALKTGQLSDANRWFGRNYRIRGSVIH 199

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPN-GP 255
           GEK GR +GFPTAN++L+ P ++   GVYA+R RT    ++  GV N G  PT       
Sbjct: 200 GEKRGRKIGFPTANLELTDPYVVPALGVYAVRARTNKHDNWIPGVMNIGVKPTFHEGITE 259

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +AR+IL  S
Sbjct: 260 PIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARRILNVS 316


>gi|332140400|ref|YP_004426138.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550422|gb|AEA97140.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 289

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 155/292 (53%), Gaps = 7/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+H GH  +L   ++ A +   P TV+ F P P  +         +SP   +
Sbjct: 1   MLTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQPEEVFMPDKAPARISPLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L + G   L+  +F  + A  SA+ F+  +LV+ L VK ++ G  FRFG  R GD  
Sbjct: 61  YELLRQQGVDRLLAVRFNAQFAQQSADTFVHDLLVDKLGVKFLVVGDDFRFGHGRKGDFK 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ  GE+YGF  V       +  +I SS+ +R AL  G    A  +LG  F I   V+H
Sbjct: 121 MLQAAGEQYGFDVVSTHSFTMHAHRI-SSTAVREALADGDFGLATEMLGRPFAIHGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-L 257
           GEK GRT+GFPTAN+ L        GV+A+R    D   ++GVAN G  PT+  NG    
Sbjct: 180 GEKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHFNGVANIGTRPTL--NGVRNQ 236

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE  IFD S ++YG+  TV     +R EIKF   E LK  +  D  KAR +L
Sbjct: 237 LEVHIFDLSSDLYGKPITVFPMAKIRDEIKFASFEALKDQIQADAAKARLLL 288


>gi|16800434|ref|NP_470702.1| hypothetical protein lin1366 [Listeria innocua Clip11262]
 gi|16413839|emb|CAC96597.1| ribC [Listeria innocua Clip11262]
          Length = 314

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 167/290 (57%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S   F+   LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMANLGVDIMYVVRFTTQFSELSPRAFVDNYLVA-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TELENYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTR 306


>gi|303257733|ref|ZP_07343745.1| riboflavin biosynthesis protein RibF [Burkholderiales bacterium
           1_1_47]
 gi|302859703|gb|EFL82782.1| riboflavin biosynthesis protein RibF [Burkholderiales bacterium
           1_1_47]
          Length = 345

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 167/297 (56%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            VAIGNFDG+H GH  +L + ++ A+   +   VL+F PHPR           +S  S+ 
Sbjct: 48  AVAIGNFDGVHRGHQALLHEVVEAAHARLLCPAVLTFEPHPREFFNPEDAPRRIS--SLH 105

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +K+  +E  G   +   +F    A+ S   F++++LV+ L  + V  G  FRFG  RAGD
Sbjct: 106 DKVEAIEACGIQRVYILRFNEHLASLSPCDFVKEILVDGLHARWVTVGENFRFGDKRAGD 165

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ G+++ F    +  L +  + I SSS IR AL +G +  A ++LG  + I   V
Sbjct: 166 IKLLEQLGKEFHFEVHPMPMLFHTHAPI-SSSRIRHALAEGDIPTANYMLGRPYMISGRV 224

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLK---EGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           +HG+++GRTLGFPT N + L P    K   EGVYA++          GVA  GR PT+  
Sbjct: 225 LHGKQLGRTLGFPTINQRILPPHSKAKPAIEGVYAVKAHGIGPRPIEGVACVGRRPTVDD 284

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +G  LLE+ +F+F  ++Y Q   V FF  +R E KF  +E+L+  + +D+ KA++IL
Sbjct: 285 HGEYLLETHLFNFHGDLYDQDVKVEFFSKIRDEKKFCSLEELRAAIADDQLKAKQIL 341


>gi|332992322|gb|AEF02377.1| riboflavin biosynthesis protein RibF [Alteromonas sp. SN2]
          Length = 306

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 159/305 (52%), Gaps = 8/305 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSS 66
           +N   P H  G V+ IG FDG+HLGH  +L   ++ A     P TV+ F P P  +    
Sbjct: 7   LNNVKPQH-SGCVLTIGKFDGVHLGHQAVLSNVLQKAKALGLPATVMVFEPQPEEVFTPD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +SP   + ++L++ G   L+  +F    A+ SA+ F+  +LV+ L VK ++ G  
Sbjct: 66  RAPARISPLREKYELLKQQGVDRLLAVRFNRAFASQSADTFVHDLLVDKLGVKFLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG+ R GD  +LQ  G+KYGF  V       +  +I SS+ +R AL          +L
Sbjct: 126 FRFGQGRKGDFAMLQAAGQKYGFEVVSTQSFMMHAHRI-SSTAVREALADSDFALGEEML 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F +   V+HGEK GRT+GFPTAN+ L        GV+A+     D   ++GVAN G 
Sbjct: 185 GRPFAVYGRVVHGEKKGRTIGFPTANVMLKRCRAPIHGVFAVHVAV-DGKKFNGVANIGT 243

Query: 247 NPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG    LE  IFD S ++YG+  TV     +R E KF   E LK  +  D  KA
Sbjct: 244 RPTL--NGVRNQLEVHIFDMSADLYGKPMTVFPVAKIRDEQKFDSFEILKAQIQADAAKA 301

Query: 306 RKILE 310
           R +LE
Sbjct: 302 RLLLE 306


>gi|118497049|ref|YP_898099.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida U112]
 gi|194324284|ref|ZP_03058058.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida FTE]
 gi|208780506|ref|ZP_03247846.1| riboflavin biosynthesis protein RibF [Francisella novicida FTG]
 gi|118422955|gb|ABK89345.1| riboflavin kinase/FMN adenylyltransferase [Francisella novicida
           U112]
 gi|194321731|gb|EDX19215.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida FTE]
 gi|208743652|gb|EDZ89956.1| riboflavin biosynthesis protein RibF [Francisella novicida FTG]
          Length = 306

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/296 (38%), Positives = 170/296 (57%), Gaps = 12/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI-IQSSSP--IFTLSPP 75
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+   ++  +P  I+     
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPLRIYDFRNK 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I    + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R G
Sbjct: 77  VIN---IHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S 
Sbjct: 134 DYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +    
Sbjct: 193 VIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 250 NLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|309973535|gb|ADO96736.1| Putative riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R2846]
          Length = 312

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 167/305 (54%), Gaps = 20/305 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGENAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           R G+  +LQ   +++GF      +  +DE R      +SS+ IR AL    +  A +LLG
Sbjct: 136 RQGNFAMLQAASKRFGFIVEDNRSFCLDEQR------ISSTAIREALANDDLQLAENLLG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ 
Sbjct: 190 KPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKR 249

Query: 248 PTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT+  NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+
Sbjct: 250 PTI--NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAK 307

Query: 307 KILES 311
               S
Sbjct: 308 AFFNS 312


>gi|54112737|gb|AAV29002.1| NT02FT0623 [synthetic construct]
          Length = 306

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 77  VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 137 LLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 196 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKNNLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 253 ETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|304412575|ref|ZP_07394180.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS183]
 gi|307303591|ref|ZP_07583344.1| riboflavin biosynthesis protein RibF [Shewanella baltica BA175]
 gi|304349051|gb|EFM13464.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS183]
 gi|306912489|gb|EFN42912.1| riboflavin biosynthesis protein RibF [Shewanella baltica BA175]
          Length = 311

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 12/307 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P T+++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L + G +YGF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFEMLVQAGIQYGF-TVVSTQSFMLGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298

Query: 302 EKKARKI 308
             +AR +
Sbjct: 299 ANEARAL 305


>gi|146298561|ref|YP_001193152.1| riboflavin biosynthesis protein RibF [Flavobacterium johnsoniae
           UW101]
 gi|146152979|gb|ABQ03833.1| riboflavin biosynthesis protein RibF [Flavobacterium johnsoniae
           UW101]
          Length = 310

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 175/311 (56%), Gaps = 15/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +FH+I    +     K  ++ +G FDG+H+GH  ILE+  +   N      VL+F PH
Sbjct: 1   MKLFHSINDFHTT----KKTILTLGTFDGVHIGHKKILERITENTENGKYESLVLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S I  L+  S + K+LE  G   L+ + F    +  +AE+F+  +LV+   +
Sbjct: 57  PRMVLQEKSEIKLLNTISEKTKLLEATGIENLVIHPFNESFSRLTAEEFVHSILVDQFHI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTK 176
           + +I G   RFG++R  +   L   G +YGF    +  +E+++     VSS+ IR ALT+
Sbjct: 117 QKIIIGHDHRFGRNRTANIENLIAFGIEYGFEVEQISAEEIQDVS---VSSTKIRKALTE 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQD 234
           G+++ A   LGY + +  +V+ G+++GRT+GFPTAN+Q+  +  L  K GVY +R    D
Sbjct: 174 GNMILANEYLGYDYFLTGEVVQGKQLGRTIGFPTANIQIEEEYKLIPKNGVYVVRALI-D 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +    G+ N G NPT V      +E  +FDF  +IYG++  VS   YLR E KF  I+ L
Sbjct: 233 EKEVFGMMNIGFNPT-VNGQKQTIEVNLFDFDADIYGKKIEVSLLQYLRDEQKFGSIDLL 291

Query: 295 KIYMGEDEKKA 305
           K  + +D++ A
Sbjct: 292 KAQLNQDKQNA 302


>gi|284050301|ref|ZP_06380511.1| riboflavin biosynthesis protein RibF [Arthrospira platensis str.
           Paraca]
 gi|291569871|dbj|BAI92143.1| riboflavin biosynthesis protein RibF [Arthrospira platensis
           NIES-39]
          Length = 340

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 31/320 (9%)

Query: 21  VVAIGNFDGIHLGHHLIL----------------------EQAIKIANNSPITVLSFNPH 58
            VA+GNFDG H GH  ++                      E+   +A +   TV++FNPH
Sbjct: 15  AVALGNFDGFHRGHQQVVRPILNPNEVAVDSQKVGFIKTDEKTPPVAISGYGTVVTFNPH 74

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+      +    L+P   +  IL + G   L+   F  + A+ +  QF++++LVE+L+ 
Sbjct: 75  PQEFFTGQTKKL-LTPLPEKIDILRRFGVQQLVLLPFDKDLASLTPAQFVEQILVEYLQA 133

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  FRFG+ R G    L+    +YG     +   ++     +SSS IR +LT+GH
Sbjct: 134 TRVSVGFDFRFGRHRMGSTEDLKAIASQYGIDVEIVSRFKSAYGDRISSSIIRESLTEGH 193

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAI---RFRTQD 234
           +  A  LLG  +T+   V+ G+++GRTLGFPTAN+QL PD  L + GVYA+    F   +
Sbjct: 194 LNRANQLLGRAYTLVGQVVQGQQLGRTLGFPTANLQLPPDKFLPQYGVYAVLVTGFAFGE 253

Query: 235 QTSYS---GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           QT+ +   GV N G  PT+  + P  +E  + D+  ++YGQ  TVS   +LRPE KF  +
Sbjct: 254 QTTIAPQLGVMNIGCRPTVAGDNP-TVEVHLLDWHGDLYGQSLTVSLEGFLRPEQKFASL 312

Query: 292 EKLKIYMGEDEKKARKILES 311
           E+LK  +  D   AR  L++
Sbjct: 313 EQLKAQIQRDCTHARTYLQA 332


>gi|56708017|ref|YP_169913.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670488|ref|YP_667045.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457098|ref|ZP_03665571.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370500|ref|ZP_04986505.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874816|ref|ZP_05247526.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604509|emb|CAG45549.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320821|emb|CAL08932.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568743|gb|EDN34397.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840815|gb|EET19251.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159205|gb|ADA78596.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 306

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 77  VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + + F+   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 137 LLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 196 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKNNLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 253 ETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|229843976|ref|ZP_04464117.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 6P18H1]
 gi|229812970|gb|EEP48658.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 6P18H1]
          Length = 308

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGENAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|225011222|ref|ZP_03701681.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-3C]
 gi|225004636|gb|EEG42599.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-3C]
          Length = 318

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 170/301 (56%), Gaps = 14/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V IG FDG+HLGH  I++Q ++ A     P  VLSF PHPR ++   S I  L   S+Q
Sbjct: 17  AVTIGTFDGVHLGHTQIIKQLVEKAKILKVPAVVLSFYPHPRIVLHQDSGIKLLD--SLQ 74

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK   LE +G    + Y F+   +   A  F+  +LV+ L  K+V+ G   RFG++R  +
Sbjct: 75  EKAAKLEALGVDYFVVYPFSKSFSRMKAATFVSDILVKGLHAKSVLIGYDHRFGRNRNAN 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G++Y F  + I   +  ++  +SS+ IR AL +G V  A   LG  F++   V
Sbjct: 135 IEDLRNYGKQYNFEVIEISA-QAIEAVAISSTKIRKALAQGQVKKANQFLGSAFSLSGKV 193

Query: 197 IHGEKIGRTLGFPTANMQ--LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP-N 253
           + G++IGRT+GFPTAN++   S  ++ KEGVY I+     Q  + G+ N G+NPT+   +
Sbjct: 194 VSGKQIGRTMGFPTANIKPTYSYKLIPKEGVYVIKSHLGGQEVF-GMLNIGQNPTVTAQD 252

Query: 254 GPLL---LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P +   +E+  F+F++++Y Q  TV   D LR EIKF+ +E L   + +D+  A  I+ 
Sbjct: 253 APSIFPKIEAHFFNFNKDLYEQEITVCLIDRLRDEIKFESLEALASQLKKDQSNALNIVT 312

Query: 311 S 311
           +
Sbjct: 313 A 313


>gi|145628099|ref|ZP_01783900.1| hypothetical protein CGSHi22121_03640 [Haemophilus influenzae
           22.1-21]
 gi|145638214|ref|ZP_01793824.1| hypothetical protein CGSHiII_05569 [Haemophilus influenzae PittII]
 gi|144979874|gb|EDJ89533.1| hypothetical protein CGSHi22121_03640 [Haemophilus influenzae
           22.1-21]
 gi|145272543|gb|EDK12450.1| hypothetical protein CGSHiII_05569 [Haemophilus influenzae PittII]
          Length = 308

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|92112613|ref|YP_572541.1| riboflavin kinase / FMN adenylyltransferase [Chromohalobacter
           salexigens DSM 3043]
 gi|91795703|gb|ABE57842.1| FMN adenylyltransferase [Chromohalobacter salexigens DSM 3043]
          Length = 355

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 16/318 (5%)

Query: 7   IEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +E+ + L N  + G  V  IGNFDG+H GH  IL+Q    A     P+ V+ F P PR  
Sbjct: 1   MELIRGLHNLREAGPCVATIGNFDGVHRGHQAILDQLKSRARALGLPVAVVVFEPQPREY 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    LS    + ++L   G   ++   F       +A++FI++VL++ L VK ++
Sbjct: 61  FAGQQAPPRLSRLRDKVELLAAHGADRILCLPFNAALRRLTADEFIERVLIQGLGVKHLV 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKG 177
            G  FRFG DRAGD  +LQ+ GE+ GF      T  +D+ R      VSS+ +RT L  G
Sbjct: 121 VGDDFRFGCDRAGDFALLQRVGERRGFGVEHTRTFVLDDER------VSSTRVRTLLASG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +   AA +LG  + +   V+   ++GRT+G PTAN+ L+   L   G+YA   R  D   
Sbjct: 175 NFAQAARMLGRPYQLTGRVVADRQLGRTIGVPTANLPLAARPLALRGIYACVTRLPDGRE 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +G AN G  PT+    P +LE  +FDF  ++YGQR TV     LR E+ F  ++ L   
Sbjct: 235 LTGAANIGWRPTVGSTRP-VLEVHLFDFDGDLYGQRLTVVPCARLRGEVNFAGLDALTRQ 293

Query: 298 MGEDEKKARKILESSYPL 315
           +  D  +AR    ++ PL
Sbjct: 294 IHADLAQARHYFRTATPL 311


>gi|254362637|ref|ZP_04978726.1| riboflavin kinase [Mannheimia haemolytica PHL213]
 gi|153094251|gb|EDN75122.1| riboflavin kinase [Mannheimia haemolytica PHL213]
          Length = 320

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 178/316 (56%), Gaps = 25/316 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           FHN++ + +L    +G V++IGNFDG+HLGH  IL +    A +   P  V+ F P PR 
Sbjct: 7   FHNLDKHIALN---QGCVLSIGNFDGVHLGHQNILARLCDRALDLGLPSVVMLFEPQPRE 63

Query: 62  IIQSSSPIFT-LSPPS----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
                S   T  +PP+    +++K+  LE+ G   ++  +F+ + A  SA+ FI  +L +
Sbjct: 64  FFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCVRFSEKFAQISADDFISDLLAK 123

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSN 169
            L+V+ +  G  FRFG  RAG    L+  G KY F     HT  ++E R      +SSS 
Sbjct: 124 RLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAVEESHTHSLNEER------ISSSL 177

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           +R AL    +  A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++
Sbjct: 178 VREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPTANIMLNRLVTPIQGVFAVK 237

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            +T+ Q S++G+AN G  PT+    P LLE  IFDF+  IYG+   V F   LR EIKF 
Sbjct: 238 VKTK-QGSFNGIANVGNRPTINGTKP-LLEVHIFDFNASIYGEAIEVIFLKKLRNEIKFP 295

Query: 290 DIEKLKIYMGEDEKKA 305
           D E LK  + +D  +A
Sbjct: 296 DFEALKAQIEKDRLQA 311


>gi|28199319|ref|NP_779633.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa Temecula1]
 gi|182682044|ref|YP_001830204.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa M23]
 gi|28057425|gb|AAO29282.1| riboflavin kinase / FAD synthetase [Xylella fastidiosa Temecula1]
 gi|182632154|gb|ACB92930.1| riboflavin biosynthesis protein RibF [Xylella fastidiosa M23]
 gi|307578312|gb|ADN62281.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 315

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 167/309 (54%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  +I S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERI-SATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALS-GIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAQQARHIL 306


>gi|46204417|ref|ZP_00050033.2| COG0196: FAD synthase [Magnetospirillum magnetotacticum MS-1]
          Length = 278

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 137/266 (51%), Gaps = 3/266 (1%)

Query: 45  ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
           + + P  VL+F PHPR       P+F LS    +E +  ++G   LI  +F    A  SA
Sbjct: 5   SGSRPAAVLTFEPHPRAFFAPDQPMFRLSGRRAKEIVFARLGLDGLIVRRFDAALAGTSA 64

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           + F++  L + L V  V+ G  F FG+ R G  G L     + G     +  +  +    
Sbjct: 65  QGFVEGWLRDQLGVSGVVIGHDFHFGRGREGSPGTLADLCAQAGIGCRIVPAVSADPGDA 124

Query: 165 -VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE 223
            +SSS IR AL  G V  A  LLGYR+ + ++V HG+K GRTLG+PTAN+ L     L  
Sbjct: 125 PISSSAIRAALAAGDVARANALLGYRWFVLAEVRHGDKRGRTLGYPTANLALDA-CGLAH 183

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           G+YA+R R  D   + GVA++GR PT     P LLE  +FDF  ++YGQ   V    YLR
Sbjct: 184 GIYAVRVRLADGNLHPGVASYGRRPTFDDGAP-LLEVHLFDFKGDLYGQEVAVELLAYLR 242

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKIL 309
            E +F   E L   M  D  +AR  +
Sbjct: 243 GEERFASAEALVAQMDVDSMQARAAI 268


>gi|46907555|ref|YP_013944.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47094122|ref|ZP_00231845.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           4b H7858]
 gi|226223930|ref|YP_002758037.1| riboflavin kinase and FAD synthase [Listeria monocytogenes
           Clip81459]
 gi|254824612|ref|ZP_05229613.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           J1-194]
 gi|254852621|ref|ZP_05241969.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           R2-503]
 gi|254932356|ref|ZP_05265715.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           HPB2262]
 gi|255520237|ref|ZP_05387474.1| riboflavin kinase and FAD synthase [Listeria monocytogenes FSL
           J1-175]
 gi|300765431|ref|ZP_07075413.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N1-017]
 gi|46880823|gb|AAT04121.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47017507|gb|EAL08317.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           4b H7858]
 gi|225876392|emb|CAS05101.1| Putative riboflavin kinase and FAD synthase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605936|gb|EEW18544.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           R2-503]
 gi|293583912|gb|EFF95944.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           HPB2262]
 gi|293593850|gb|EFG01611.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           J1-194]
 gi|300513868|gb|EFK40933.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N1-017]
 gi|328468612|gb|EGF39612.1| riboflavin kinase and FAD synthase [Listeria monocytogenes 1816]
 gi|328475049|gb|EGF45837.1| riboflavin kinase and FAD synthase [Listeria monocytogenes 220]
 gi|332311772|gb|EGJ24867.1| Riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           Scott A]
          Length = 314

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDNYLVA-LHVQHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +  G   V I + +   S  +SS+NIR A+ +G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYAD--GRFEVTIVDKQTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|260913215|ref|ZP_05919697.1| riboflavin biosynthesis protein RibF [Pasteurella dagmatis ATCC
           43325]
 gi|260632802|gb|EEX50971.1| riboflavin biosynthesis protein RibF [Pasteurella dagmatis ATCC
           43325]
          Length = 312

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 16/304 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
            +LP +L G  + IGNFDG+HLGH  IL+   K AN  N P+ V+ F P PR        
Sbjct: 13  HNLPLNLSGCALTIGNFDGVHLGHQAILKHLRKKANELNLPVIVMLFEPQPREYFTGEDI 72

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     +   L K G   ++  +F    A  SAE+FI+  LV  L V+ +  G  FR
Sbjct: 73  PARLMRLRDKLHALAKAGVDYVLCIRFNQYFAELSAEKFIEDWLVNKLRVRFLSIGDDFR 132

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-----VSSSNIRTALTKGHVLNAA 183
           FG  R GD  +LQ+ GE+ GF      ++ NN+S       +SS+ IR AL    +  A+
Sbjct: 133 FGAKRQGDFSLLQQAGERLGF------QVENNRSYCFHNLRISSTAIREALANDDLSLAS 186

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            +LG  ++I   V HG K+GRT+GFPTAN+ L   +   +GVY I+ R +    + GVAN
Sbjct: 187 KMLGKPYSILGRVAHGNKLGRTIGFPTANIPLHRQVNPVKGVYVIKVRLKTGEMFHGVAN 246

Query: 244 FGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G  PT+  NG + LLE+ +FDF ++IYGQ   +     +R E KF   ++LK  + +D 
Sbjct: 247 IGNRPTI--NGIVQLLEAHLFDFQRDIYGQCIEIELCHKIRNEQKFASFDELKQQILKDV 304

Query: 303 KKAR 306
           + A+
Sbjct: 305 EFAK 308


>gi|145637268|ref|ZP_01792929.1| hypothetical protein CGSHiHH_05187 [Haemophilus influenzae PittHH]
 gi|145269520|gb|EDK09462.1| hypothetical protein CGSHiHH_05187 [Haemophilus influenzae PittHH]
          Length = 308

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGENAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|145630059|ref|ZP_01785841.1| hypothetical protein CGSHi22421_08408 [Haemophilus influenzae
           R3021]
 gi|145632349|ref|ZP_01788084.1| hypothetical protein CGSHi3655_07839 [Haemophilus influenzae 3655]
 gi|144984340|gb|EDJ91763.1| hypothetical protein CGSHi22421_08408 [Haemophilus influenzae
           R3021]
 gi|144987256|gb|EDJ93786.1| hypothetical protein CGSHi3655_07839 [Haemophilus influenzae 3655]
 gi|301169688|emb|CBW29289.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae 10810]
          Length = 308

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|71276194|ref|ZP_00652473.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Dixon]
 gi|71900453|ref|ZP_00682584.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|170730686|ref|YP_001776119.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa M12]
 gi|71162955|gb|EAO12678.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Dixon]
 gi|71729759|gb|EAO31859.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|167965479|gb|ACA12489.1| riboflavin kinase / FAD synthetase [Xylella fastidiosa M12]
          Length = 315

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 167/309 (54%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASATPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  +I S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERI-SATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALS-GIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTAQIHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAQQARHIL 306


>gi|319897523|ref|YP_004135720.1| bifunctional riboflavin kinase/fad synthetase [Haemophilus
           influenzae F3031]
 gi|317433029|emb|CBY81400.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3031]
          Length = 308

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|221135352|ref|ZP_03561655.1| riboflavin biosynthesis protein RibF [Glaciecola sp. HTCC2999]
          Length = 315

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 159/311 (51%), Gaps = 11/311 (3%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
            HNI          K  V+ IG FDG+HLGH  +L   I  A +   P TV+ F P P  
Sbjct: 7   LHNIRAQH------KSCVLTIGKFDGVHLGHKAVLSSLIAKAKSLGLPSTVMVFEPQPEE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +    +    LS    + + L+ +G   LI   FT + A+ S E FI+  LV  L VK +
Sbjct: 61  VFSPDNAPARLSRWRDKYEALKDIGIDRLICVHFTAKFASQSPEHFIEHTLVNALGVKFL 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG+ R GD  +L+  G ++GF  V     R++  +I SS+ IR AL       
Sbjct: 121 VVGDDFRFGQARRGDFTMLKAAGHEHGFSVVNTASFRHDDCRI-SSTAIREALANNQFTL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  +LG  FTI   V+HG+  GRT+GFPTAN+ L        GV+A++   Q      GV
Sbjct: 180 ANEMLGREFTINGRVVHGQAKGRTIGFPTANVNLQRAKAPIVGVFAVQAECQG-LRLDGV 238

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  PT V     LLE  +FDF Q+IYGQ  +VS    LR   KF    +L+  + ED
Sbjct: 239 ANIGTRPT-VDGHQGLLEVHLFDFDQDIYGQYLSVSLQHKLRGIKKFDTFAQLQTQIAED 297

Query: 302 EKKARKILESS 312
            ++AR +L  S
Sbjct: 298 AQQARNLLAES 308


>gi|291562547|emb|CBL41363.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SS3/4]
          Length = 309

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 164/294 (55%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VV+IG FDG+H GH  ++ + +K       I V +F   P T+++       ++ P  +E
Sbjct: 17  VVSIGKFDGLHRGHQKLMHEMLKWKEQGFKIAVFTFATPPGTLVKGKMQTMIMTNPE-RE 75

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE+ G   ++ Y F  E  + + E+F+  +LV  +    +++G    FG   AGD  +
Sbjct: 76  MLLERAGVDYIVEYPFDEEVCHMAPEKFVSDILVGHMNAGVIVSGPDCHFGYKAAGDCAM 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   +YG+    +D+ R+ + +I+SS+ IR  L  G+++ A  LLGY + +   V HG
Sbjct: 136 LERLSSEYGYRYFVVDKERDEEGKIISSTYIREMLADGNIIKANKLLGYYYFVTGTVQHG 195

Query: 200 EKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             IG T  +PTAN+ + P +  L K GVY  R  T D  +Y G+ N G  PT+    P+ 
Sbjct: 196 NAIGHTKLYPTANL-IPPAVKHLPKFGVYVTRV-TVDGKTYGGLTNVGAKPTISGENPVG 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA-RKILE 310
           +E+++++F  ++YG+   V   D++RPE+KF+ I+ LK  +  D K+  R+ LE
Sbjct: 254 VETYLYNFEGDLYGKDMKVELLDFVRPEMKFESIDALKAQLDHDIKECQRRYLE 307


>gi|253700251|ref|YP_003021440.1| riboflavin biosynthesis protein RibF [Geobacter sp. M21]
 gi|251775101|gb|ACT17682.1| riboflavin biosynthesis protein RibF [Geobacter sp. M21]
          Length = 323

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 176/323 (54%), Gaps = 12/323 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFN 56
           M +F +I     +   L+   V IGNFDG+HLGH  I     E+A ++   S   V++F 
Sbjct: 1   MVIFRSI---SDITEKLRHPAVTIGNFDGVHLGHREIFRRVRERAAELGGVS--VVVTFV 55

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP  ++ S   I  ++    +E ++E  G   L+   F  E A   A  F+QKVLV+ +
Sbjct: 56  PHPLKVVGSHKEIRLITTRREKEFLIESAGIDYLLEIPFDREFAAVPAADFVQKVLVDAI 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V++++ G  + FG+ R G+  +L+  GE+YG+    +D + +N + + SS+ +R  +T 
Sbjct: 116 GVESLVIGYDYAFGRGREGNVQLLRGMGERYGYSVEVLDPI-SNGATVYSSTKVRDMVTT 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G V     +LG  + I   V+HG + GR LGFPTAN+ +  D+L   GVYA++     + 
Sbjct: 175 GDVEGVVGVLGRHYAITGTVVHGHQRGRGLGFPTANLAMEKDLLPAAGVYAVKVCLGHEL 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G  N G NPT   NG L LE F+FD  +++YG+  TV F   LR E +F++++ LK 
Sbjct: 235 -LDGACNIGTNPTF-GNGALSLEVFLFDLDRDLYGREVTVFFIARLREERRFEELQALKE 292

Query: 297 YMGEDEKKARKILESSYPLSERD 319
            +  D  + R IL+ + P+   D
Sbjct: 293 QIALDVARCRGILQDAEPVGAGD 315


>gi|309751369|gb|ADO81353.1| Putative riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R2866]
          Length = 312

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 136 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 193 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 252

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 253 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 310

Query: 310 ES 311
            S
Sbjct: 311 NS 312


>gi|126173297|ref|YP_001049446.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS155]
 gi|160874275|ref|YP_001553591.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS195]
 gi|125996502|gb|ABN60577.1| FMN adenylyltransferase / riboflavin kinase [Shewanella baltica
           OS155]
 gi|160859797|gb|ABX48331.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS195]
 gi|315266508|gb|ADT93361.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS678]
          Length = 311

 Score =  179 bits (454), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 12/307 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P T+++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +L + G +YGF TV   +     SQ VSS+ +R  L KG++  A
Sbjct: 122 VGDDFCFGQGRKGNFEMLVQAGIQYGF-TVVSTQSFMLGSQRVSSTAVREQLAKGNLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y GVA
Sbjct: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIYEGVA 240

Query: 243 NFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK  +  D
Sbjct: 241 NIGFRPTV--NGQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298

Query: 302 EKKARKI 308
             +AR +
Sbjct: 299 ANEARAL 305


>gi|182414633|ref|YP_001819699.1| riboflavin biosynthesis protein RibF [Opitutus terrae PB90-1]
 gi|177841847|gb|ACB76099.1| riboflavin biosynthesis protein RibF [Opitutus terrae PB90-1]
          Length = 313

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 157/297 (52%), Gaps = 9/297 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI 69
           S P HL     AIG FDG+HLGH  ++E A++ A  +N    VL+F+PHP  I++ + P 
Sbjct: 17  SRPVHL-----AIGIFDGVHLGHAAVIEAAVQSARRSNGQSAVLTFDPHPSVILRPAEPT 71

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L   S + ++L ++G  A+I   FT+E A   A QF+  +     ++  +  G  +RF
Sbjct: 72  RLLMNRSAKARVLGRLGIEAVINQPFTVELAAMEAVQFVPWLKQHVPQLAGIYVGENWRF 131

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+ R GD  +L   G K G  +VF     +   + +SSS IR A+T G +  A  +LGY 
Sbjct: 132 GRGRRGDIALLVNEGRKVGV-SVFSAPRVSLDGEPISSSRIRAAVTAGEIAAANAMLGYV 190

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNP 248
           +  E  V+ G K+GRT+GFPT N+  +PD+  + GVY +R   T+       VAN+G  P
Sbjct: 191 YFAEGRVVPGNKLGRTMGFPTLNLAWAPDLQPRFGVYVVRVTGTKSTAPLRAVANYGARP 250

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           T+       LE  + D      G   TV +  +LRPE+KF  +  L+  +  D + A
Sbjct: 251 TVEKAAEPRLEVHLLDECPYDAGDEITVEWLHFLRPEMKFGGLGTLRAQIAADREAA 307


>gi|296117461|ref|ZP_06836048.1| riboflavin biosynthesis protein RibF [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295975982|gb|EFG82773.1| riboflavin biosynthesis protein RibF [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 313

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P   +G V A+GNFDG+HLGH  +L           + V++F PHPR + +   P F
Sbjct: 10  RDIPAAARGTVAALGNFDGVHLGHAHLLRTLRAARPEGELAVVTFEPHPRELFRPQDPPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+ P  +   L  +G   + +  FT E +  SAE+F+  VL   L V+ V  G  F FG
Sbjct: 70  RLTLPDERFSALVALGVRHVFQIPFTPEFSAMSAEEFVTGVLHAGLGVRHVACGADFAFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   L +     G     +  L  + +   SS+ IR  L +G+   AA  LG  +
Sbjct: 130 HRRRGDVAFLAQEAHDLGIGLTVVPAL-CDAAGPYSSTRIRRLLQEGYPERAADELGRAW 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D     GVAN GR PT+
Sbjct: 189 SIRGQVEHGDKRGRLLGFPTANIALGRHLEPARGVYAVSVRMGDGRVCPGVANIGRRPTI 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  LE  + DF  ++YGQ  +V+    LR E +F  ++ L+  +  D + AR  L
Sbjct: 249 NDGQVSRLEVHLLDFDGDLYGQTLSVALHTLLREERRFDGLDALRAQIARDTQAARDYL 307


>gi|149928078|ref|ZP_01916325.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Limnobacter
           sp. MED105]
 gi|149823164|gb|EDM82401.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Limnobacter
           sp. MED105]
          Length = 318

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 164/302 (54%), Gaps = 9/302 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG  + IGNFDG+H GH  +  + +  A    +  TV++ +PHP+      +P F L   
Sbjct: 14  KGTALTIGNFDGVHSGHAELFRRVVFAARAQGLVPTVVTLHPHPKEFF---NPAFKLDRI 70

Query: 76  S-IQEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S ++++I+E  + G   +    F    A+ S E F+Q+VL+  L  K V  G  FRFG  
Sbjct: 71  STLRDRIIEMKRCGIEQVCILPFNKRMASLSPEAFVQEVLLNQLNAKQVWVGDDFRFGAK 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           RAGD  +L+  GE +GF    + E++ + S+ VSSSNIR AL  G V  AAH+LG+    
Sbjct: 131 RAGDFALLKGLGESHGFTVNDLAEVQTDGSR-VSSSNIREALKAGDVAKAAHMLGHPLAY 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              ++HG+K+GRTLGFPT N++++       G+ A+      +     VA+ G  PT+  
Sbjct: 190 SGHIVHGKKLGRTLGFPTMNLRIAGRASALTGILAVWVHGLAEKPLPAVASMGVRPTVEQ 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  +LLE+FI D+    YG+   +    ++RPE  F  ++ +   M +D  KA  +L ++
Sbjct: 250 SDQILLETFIPDWQGNAYGKLLRIEVLAHIRPEQHFDSLDTMVEQMHKDTAKAMAMLAAN 309

Query: 313 YP 314
            P
Sbjct: 310 QP 311


>gi|315282185|ref|ZP_07870648.1| riboflavin biosynthesis protein RibF [Listeria marthii FSL S4-120]
 gi|313614171|gb|EFR87852.1| riboflavin biosynthesis protein RibF [Listeria marthii FSL S4-120]
          Length = 314

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 170/290 (58%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA ++A    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQSVIKQAKQLAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQDFVDNYLVA-LNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L     K  F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 NDLADYA-KGRFEVTVVDK-QTAASDKISSTNIRRAITEGELEVANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTR 306


>gi|68249551|ref|YP_248663.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 86-028NP]
 gi|68057750|gb|AAX88003.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae
           86-028NP]
          Length = 312

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGENAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 136 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 193 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 252

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 253 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 310

Query: 310 ES 311
            S
Sbjct: 311 NS 312


>gi|16272900|ref|NP_439124.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae Rd KW20]
 gi|260580053|ref|ZP_05847883.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae RdAW]
 gi|1573988|gb|AAC22622.1| riboflavin kinase / FMN adenylyltransferase (ribF) [Haemophilus
           influenzae Rd KW20]
 gi|260093337|gb|EEW77270.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae RdAW]
          Length = 312

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 18  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 76

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 77  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQLADVFIEQTLVNHLHVKFLSIGDDFKFGSK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 136 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 192

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 193 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 252

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 253 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 310

Query: 310 ES 311
            S
Sbjct: 311 NS 312


>gi|297621090|ref|YP_003709227.1| putative riboflavin kinase/FMN adenylyltransferase [Waddlia
           chondrophila WSU 86-1044]
 gi|297376391|gb|ADI38221.1| putative riboflavin kinase/FMN adenylyltransferase [Waddlia
           chondrophila WSU 86-1044]
          Length = 318

 Score =  179 bits (453), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 166/288 (57%), Gaps = 5/288 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+H GHH ++EQ++  A        VL+F+ HP  ++ + +P+  +  P  +
Sbjct: 19  VLTIGNFDGVHRGHHRVIEQSVSYARLIGGKSVVLTFSNHPSEVLPNRTPVLPICTPLHK 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++LEK+    LI+  F+LE +  SAE FIQ +  +++    ++ G   RFG +R GD+ 
Sbjct: 79  KQLLEKLSVDFLIQIPFSLEFSKQSAETFIQSIR-KFIPFSHLVLGYDARFGNNRQGDQE 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            +Q++ + +GF T +ID +  N    VSSSNIR A+  G+   A+ LL   ++I S VI 
Sbjct: 138 AIQQQAKIFGFTTDYIDCVDIN-GITVSSSNIRIAVKNGNFTEASKLLERPYSILSTVIK 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           GE+IG  +GFPTAN+ ++   L   GVYA+  +  DQ +  GVAN G  PT+        
Sbjct: 197 GEQIGTQIGFPTANLDVANLCLPPFGVYAVHLKC-DQATLPGVANLGVAPTLKNTRLPTF 255

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           E F+ D    + G+   +    +LR E+KF  +++LK  + ED K A+
Sbjct: 256 EVFMLDGILNLLGKTVELIPLHFLRTEVKFSSLKQLKQQISEDIKTAK 303


>gi|319778237|ref|YP_004129150.1| Riboflavin kinase [Taylorella equigenitalis MCE9]
 gi|317108261|gb|ADU91007.1| Riboflavin kinase [Taylorella equigenitalis MCE9]
          Length = 321

 Score =  179 bits (453), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 164/316 (51%), Gaps = 22/316 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSF 55
           H+  N+  N S         + +GNFDG+HLGH  IL    K+ + S IT      VL+F
Sbjct: 9   HISRNLLSNSST-------CLTVGNFDGVHLGHQSIL----KLVSQSAITKELVPSVLTF 57

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQ---EKILE--KMGFSALIRYKFTLETANYSAEQFIQK 110
            PHPR     +     L P  IQ   +K+L   + G S +   +F   TA+   E FI  
Sbjct: 58  EPHPREYFGVTGNRPELIPTKIQGLRDKVLSLGRCGISEIYIQRFNKTTASMLPEDFITS 117

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           +LV+ L+VK++  G  FRFG  R GD  +L+   +K+GF   FID++ +      SSS +
Sbjct: 118 ILVKGLKVKSLFVGADFRFGYKRKGDSEMLKSASKKFGFDVNFIDDILDTNQIRYSSSEL 177

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           R AL  G++  A+ ++G  +     VIHG+K+G  +G PT NM++     L+ G+Y +  
Sbjct: 178 RNALAYGNISQASQIMGRNYHFTGRVIHGKKLGAKIGTPTMNMRVPQRFALRSGIYIVTV 237

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
                     VAN G  PT+  +G +LLE  I D     YG+   VSF D++R E KF  
Sbjct: 238 SGLSAEPLQAVANLGIRPTVESSGEVLLEVHILDRIISAYGKIINVSFLDFIRDEEKFPS 297

Query: 291 IEKLKIYMGEDEKKAR 306
           +E + I + +D +KA+
Sbjct: 298 VEAMAIAIQKDIEKAK 313


>gi|293374235|ref|ZP_06620563.1| riboflavin biosynthesis protein RibF [Turicibacter sanguinis PC909]
 gi|292647068|gb|EFF65050.1| riboflavin biosynthesis protein RibF [Turicibacter sanguinis PC909]
          Length = 305

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 175/303 (57%), Gaps = 8/303 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ 64
           + +NQ+  N  +G  VA+G FDG+H+GH L++++AI+ A  + +   V++F+P+P  I++
Sbjct: 4   LNLNQTSFNSEEGLSVALGYFDGLHIGHQLVIKEAIEYAKKNGLKSAVMTFSPNPNVILK 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             S    ++PP+ + ++L ++G   L+   F  E A+  A  FI++ LV+ ++V+ V TG
Sbjct: 64  KLSSEHLITPPTEKVRLLTELGVDYLMILTFNEELASLRAIDFIERYLVK-MKVEHVSTG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFGK   G   +L++  EK+  +     E+   K   + ++ I++ L  G++  A  
Sbjct: 123 FDFRFGKKGEGSVELLRQYPEKFSLNVTDKKEIEGEK---IGATEIKSYLAVGNIEKANE 179

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVAN 243
           +LG  +T+   VI G++ GR +GFPTAN+  +   I+ K GVYA+R   + Q SY+G+ N
Sbjct: 180 MLGRPYTLCGTVISGQQKGRQIGFPTANVATTEAYIIPKNGVYAVRVWVKGQ-SYAGMCN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT      + +E  I DF+Q+IYGQ   V F+  LR E +F  IE L   +  D K
Sbjct: 239 IGHNPTFNFIDNVSVEVHILDFNQDIYGQEMKVEFYHRLRDEERFSSIEALMTQLNHDRK 298

Query: 304 KAR 306
             R
Sbjct: 299 TVR 301


>gi|1175472|sp|P44957|RIBF_HAEIN RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
          Length = 308

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQLADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|90412465|ref|ZP_01220468.1| hypothetical protein P3TCK_13873 [Photobacterium profundum 3TCK]
 gi|90326502|gb|EAS42908.1| hypothetical protein P3TCK_13873 [Photobacterium profundum 3TCK]
          Length = 306

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 157/292 (53%), Gaps = 6/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+HLGH  +L Q I  A +   P TV++F P P  +  + +    L+    +
Sbjct: 1   MLTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQPLELFAADNAPARLTRFRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              L+K G   L+   F  + AN SAE F++++LVE L VK ++ G  FRFGK R G+  
Sbjct: 61  YTQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGVKFLVVGDDFRFGKGRRGNFE 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  G ++GF  V          Q VSS+ IR AL    +  AA +LG  ++I   V H
Sbjct: 121 MLEAAGREFGFVVVSTQSF-CMLEQRVSSTAIRHALVNDQLPLAASMLGRPYSISGRVSH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           G K+GRT+GFPTAN+ L   +    GVYA+     D     GVAN G  PT+  NG    
Sbjct: 180 GRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVIGVDGAPLPGVANVGHRPTV--NGVRQQ 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE  +FDF  ++YG +  V     LR EIKF+  + LK  +  D + AR  L
Sbjct: 238 LEVHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQIERDAQTARVWL 289


>gi|261407932|ref|YP_003244173.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. Y412MC10]
 gi|261284395|gb|ACX66366.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. Y412MC10]
          Length = 317

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 163/297 (54%), Gaps = 8/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+HLGH  +L  A+ IA  N  P  +++F PHP+ +I   S    L+P   +
Sbjct: 23  VAAIGQFDGLHLGHASVLSTAVNIARENGVPAALITFYPHPKDVIGKGSYEGYLTPQPDK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++LE+MG   L   +F  E +  S E F++++L   L ++T + G  FRFG   AGD  
Sbjct: 83  QQLLEQMGIDILYVVEFNKEFSQVSPEAFVEEMLFP-LNLQTAVVGFDFRFGHKGAGDAV 141

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ+ GE  G  +V          + V SS+IR AL  G + +A   LG  + I   V+H
Sbjct: 142 KLQELGE--GKMSVVTVPPFLVDGEKVGSSSIRIALKTGQLSDANRWLGRNYHIRGTVVH 199

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPN-GP 255
           GEK GR +GFPTAN++L+ P +    GVYA+R RT     +  GV N G  PT       
Sbjct: 200 GEKRGRKIGFPTANLELTDPFVAPALGVYAVRARTDKHYDWIPGVMNVGVKPTFHEGITE 259

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +ARKIL  S
Sbjct: 260 PIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARKILNVS 316


>gi|162146413|ref|YP_001600872.1| riboflavin biosynthesis protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209543578|ref|YP_002275807.1| riboflavin biosynthesis protein RibF [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784988|emb|CAP54531.1| putative riboflavin biosynthesis protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531255|gb|ACI51192.1| riboflavin biosynthesis protein RibF [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 315

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 152/301 (50%), Gaps = 1/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P   +G   A+GNFDG+HLGH  ++        +  + V++F PHPR + +   P F
Sbjct: 10  RHIPAEARGMAAALGNFDGVHLGHAHLVHLLHAARPDLGLAVVTFEPHPRELFRPQDPPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+ P  +   L  +G   + +  F    +  SAE+F+  VL E L ++ +  G  F FG
Sbjct: 70  RLTLPEERLAALSALGVRHVFQIPFDAAFSAMSAERFVTDVLHEGLGLRHLGCGADFVFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G+   L  R E+ G     +  L  + S   SS+ IR  L  G+   AA  LG  +
Sbjct: 130 HRRGGNVTFLADRAEELGIGLTAVPPL-TDASGPYSSTRIRRLLQDGYPERAAEELGRAW 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D  ++ GVAN GR PT+
Sbjct: 189 SIRGVVQHGDKRGRLLGFPTANVPLGRHLEPARGVYAVTVRLADGRAWPGVANIGRRPTI 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  LE  + DF  ++YGQ  +V     LR E +F  ++ LK  + ED   AR  L+
Sbjct: 249 DDGQESRLEVHLLDFDGDLYGQTLSVGLHTLLREERRFAGLDALKAQIAEDAATARAYLD 308

Query: 311 S 311
           +
Sbjct: 309 T 309


>gi|319786582|ref|YP_004146057.1| riboflavin biosynthesis protein RibF [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465094|gb|ADV26826.1| riboflavin biosynthesis protein RibF [Pseudoxanthomonas suwonensis
           11-1]
          Length = 316

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 8/313 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F +++     P   +G VV IG FDG+HLGH  ++  A+  A   + P   LSF   P
Sbjct: 3   RLFRDVDGGSLCP---RGSVVCIGAFDGLHLGHRALVRHAVARARALDVPAVGLSFECLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+ P  + ++L   G   L   +F    A   AE F+++VL   L  +
Sbjct: 60  REFFARGNPPPRLTLPRDRIRLLLDQGLDHLGLLRFNAALAAMPAEDFVRRVLAGRLGAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD  +LQ  G + GF    I+ +   + + VSS+ IR AL  G  
Sbjct: 120 EVWIGPEFRFGNRRGGDLALLQAMGAELGFQAAEIEPV-QVQGERVSSTRIREALVAGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
                LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          + 
Sbjct: 179 ARVGLLLGRPYAIGGRVVRGRQLGRTLGFPTANLRF-PKAPALSGIYATWVHGVAAQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF+ ++YG+   V F   LR E KF D+  L + M 
Sbjct: 238 SVSSFGTRPTVEGVEP-LLEAHLFDFAGDLYGRHIEVEFVAKLRDEEKFPDLPALTVQMQ 296

Query: 300 EDEKKARKILESS 312
            D  +AR IL  S
Sbjct: 297 RDAGQARAILSES 309


>gi|187931315|ref|YP_001891299.1| riboflavin kinase/FMN adenylyltransferase [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712224|gb|ACD30521.1| riboflavin kinase/FMN adenylyltransferase [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 306

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+         F +     +
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPLPKEFFLKDKAPFRIYDFRNK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R GD  
Sbjct: 77  VINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIVGDDFKFGKNRGGDYA 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  + +  +   +  L N  +  +SSS+IR ALT   ++ A  LLG    I S VIH
Sbjct: 137 LLNQYSQTHDLNVDKVSTL-NLDNHRISSSDIRQALTNHDLIEANKLLGESLKINSRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GR +GF TAN +L  +  LK GVY  R    D   Y GVAN G  PT +     LL
Sbjct: 196 GQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY-GVANAGTRPT-IDGKNNLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 253 ETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|329929304|ref|ZP_08283057.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. HGF5]
 gi|328936673|gb|EGG33116.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. HGF5]
          Length = 317

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 162/294 (55%), Gaps = 8/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+HLGH  +L  A+ IA  N  P  +++F PHP+ +I   S    L+P   +
Sbjct: 23  VAAIGQFDGLHLGHASVLSAAVNIARENGVPAALITFYPHPKDVIGKGSYEGYLTPQPDK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++LE+MG   L   +F  E +  S E F++++L   L ++T + G  FRFG   AGD  
Sbjct: 83  QQLLEQMGIDVLYVVEFNKEFSQVSPEAFVEEMLFP-LNLQTAVVGFDFRFGHKGAGDAV 141

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ+ GE  G  +V          + V SS+IR AL  G + +A   LG  + I   V+H
Sbjct: 142 KLQELGE--GKMSVVTVPPFLVDGEKVGSSSIRIALKTGQLSDANRWLGRNYHIRGTVVH 199

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPN-GP 255
           GEK GR +GFPTAN++L+ P +    GVYA+R RT     +  GV N G  PT       
Sbjct: 200 GEKRGRKIGFPTANLELTDPFVAPALGVYAVRARTDKHHDWIPGVMNVGVKPTFHEGITE 259

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +ARKIL
Sbjct: 260 PIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARKIL 313


>gi|45656624|ref|YP_000710.1| riboflavin biosynthesis protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599859|gb|AAS69347.1| riboflavin biosynthesis protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 318

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 178/315 (56%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M  FH IE  Q+        VV +GNFDGIHLGH  +L+Q +K++  + ++  V++++P+
Sbjct: 1   MITFHTIE--QAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   + +  L     +E+ + + G   L+   F  E A  +AE F++++L++ L+ 
Sbjct: 59  PAIVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK R G+  +L++  EK  +    +D +  N +++ SSS +R  +T+G+
Sbjct: 119 KNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLNDTKL-SSSYVRRLITEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           V  A H L   ++I   V+ G K GR +GFPTAN++ + DILL   GVYA      +   
Sbjct: 178 VKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYA-GLTQVEGIE 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N GRNPT   N  L LES IFDF ++IY Q   + F + +R EIKF  +E L   
Sbjct: 237 YPSMINIGRNPTFGINS-LTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQ 295

Query: 298 MGEDEKKARKILESS 312
           + +DE   R IL+S+
Sbjct: 296 LKQDEILTRNILKST 310


>gi|160872471|ref|ZP_02062603.1| riboflavin biosynthesis protein RibF [Rickettsiella grylli]
 gi|159121270|gb|EDP46608.1| riboflavin biosynthesis protein RibF [Rickettsiella grylli]
          Length = 310

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 160/292 (54%), Gaps = 6/292 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+H GH  +++  IK+A   + P  V+ F PHP+      +    L    
Sbjct: 17  GCVATIGNFDGLHRGHQKVIQSLIKLARQFHRPTCVIIFEPHPQEFFYRENAPARLMRFR 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L+ +G   ++  +F    A  SA  F++K+L+E L +K ++ G  FRFGK R GD
Sbjct: 77  EKFKSLQALGIDRVLCLRFNKRLAECSATDFVKKILIEKLGIKGLMIGDDFRFGKARQGD 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+  G +YGF       L  +  +I  SS +R A+ +     A  LLG+ FT+   V
Sbjct: 137 WVLLKNLGREYGFKVFSTPTLLFDNERI-GSSRVRNAVKQADFKLAERLLGHSFTLSGRV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-P 255
           I+G++ GR LGFPTAN+ L   I   EGV+ ++         +GVAN G  PTM  NG  
Sbjct: 196 IYGDQRGRLLGFPTANVGLHRRIAPLEGVFIVKVYGLASIPIAGVANCGTRPTM--NGLK 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LLE ++FDF++ IYGQ   + F + +R E KF+ IE LK  + +D   A++
Sbjct: 254 NLLEVYLFDFNRTIYGQFIEIEFLEKIRDEKKFESIETLKQRIAKDVATAKE 305


>gi|94496307|ref|ZP_01302884.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. SKA58]
 gi|94424053|gb|EAT09077.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. SKA58]
          Length = 308

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSS 67
           +  +P HL+G V+A+GNFDG H GH  ++ +AI    A   P  V +F+PHP  + +  +
Sbjct: 7   SAPVPPHLRGSVMALGNFDGFHAGHQAVVGRAIARAKAEGRPAIVATFDPHPMRLFRPDT 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    QE +  + G  A++ + FT   A      ++ +VL+E + V  V+TG  F
Sbjct: 67  PSFRLTTLDQQEALFARAGADAMMVFDFTPALAALEPADYV-RVLIEDMGVAAVVTGEDF 125

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG+ R+G            G     +  + + +  I+SS+ +R AL  G    A  LL 
Sbjct: 126 TFGRARSGTVDSFAA----LGLSAQAVGPVSDAQG-IISSTRVREALRAGDCETACRLLT 180

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             F I   V HG+K+GRT+GFPTAN+ + P +    G+YA+R    D    +G AN G  
Sbjct: 181 RPFAIRGVVQHGDKLGRTIGFPTANIDMGPYLRPAYGIYAVRGILPDGRVLNGAANLGIR 240

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P    LLE   FDF++ +Y Q   V    YL  E K+  ++ L   + +D   AR+
Sbjct: 241 PSFDPPKE-LLEPHFFDFAESLYAQEVEVQLIRYLHGERKYDGLDALTAGIAQDCADARQ 299

Query: 308 ILESS 312
           IL  +
Sbjct: 300 ILAGT 304


>gi|261250334|ref|ZP_05942910.1| riboflavin kinase/FMN adenylyltransferase [Vibrio orientalis CIP
           102891]
 gi|260939450|gb|EEX95436.1| riboflavin kinase/FMN adenylyltransferase [Vibrio orientalis CIP
           102891]
          Length = 314

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 12/305 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+      +H +G V+ IGNFDG+HLGH  +L Q  + A+    P TV++F+P P  +
Sbjct: 8   HNIK------SHHQGCVLTIGNFDGVHLGHQEVLRQVSEQASVLGLPSTVMTFDPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    AN SA++FI  +LV+ L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKYVQLSKLNIERLLCVNFNHRFANQSADEFISDLLVKRLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R G+  +LQK G++YGF  V     R  + + VSS+ IR AL K  +  A
Sbjct: 122 VGDDFCFGRGREGNFAMLQKAGKQYGFEVVSTQSFRLEQLR-VSSTAIRKALAKDKLDAA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +      +    GVA
Sbjct: 181 AEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVEALGLGEQPIGGVA 240

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG    LE  +FDF   +YG++  +   D +R E KF+  E LK  +  D
Sbjct: 241 NIGNRPTV--NGVRQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFEALKHQIELD 298

Query: 302 EKKAR 306
            + AR
Sbjct: 299 AEAAR 303


>gi|170078993|ref|YP_001735631.1| riboflavin kinase/FAD synthase; RibF [Synechococcus sp. PCC 7002]
 gi|169886662|gb|ACB00376.1| riboflavin kinase/FAD synthase; RibF [Synechococcus sp. PCC 7002]
          Length = 331

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 168/317 (52%), Gaps = 22/317 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA-------------NNSP---ITVLSFNPHPRTIIQ 64
            +A+GNFDG+H GH  ++  A+  A             +NSP    TV++F+PHPR    
Sbjct: 15  CIALGNFDGVHRGHQRVIAPAVTQARALSQGVVVGDRLSNSPKIHATVVTFDPHPREFF- 73

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           S +P   L+P   ++  L + G   L+   F  E A  S ++F+ ++LV+ L+ +++  G
Sbjct: 74  SGNPQHLLTPLPEKQAFLAQFGIEQLVLLPFDRELAALSPQEFVAEILVKQLQTQSISVG 133

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           + F FG+ R+G    LQ   + +G   V I  L       +SSS IR AL  G +  A  
Sbjct: 134 SDFSFGRGRSGSATDLQAIAKSFGID-VHITPLCREAETRISSSAIREALATGQIQYANQ 192

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD--QTSYSGV 241
           LLG  ++++  V HG+K+GR +GFPTAN+Q  +   L K GVYA++  T D   T+  G+
Sbjct: 193 LLGRPYSLQGTVTHGQKLGRQIGFPTANLQGEATKFLPKYGVYAVQV-TSDVLPTAQWGI 251

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PT+       +E  + D+ Q++YG    V    YLRPE KF  ++ L+  + +D
Sbjct: 252 LNIGCRPTVTTTALPTVEVHLLDYHQDLYGANLKVDLLHYLRPEQKFASLQALQNQIHQD 311

Query: 302 EKKARKILESSYPLSER 318
             +AR +L ++    ER
Sbjct: 312 GDRARTLLTTTSNQHER 328


>gi|85858638|ref|YP_460840.1| riboflavin kinase / FMN adenylyltransferase [Syntrophus
           aciditrophicus SB]
 gi|85721729|gb|ABC76672.1| riboflavin kinase / FMN adenylyltransferase [Syntrophus
           aciditrophicus SB]
          Length = 326

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 165/303 (54%), Gaps = 6/303 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQ-SSS 67
           + + +  KG V  IGNFDG+HLGH  I  + ++ A    S   V++F+PHP++++     
Sbjct: 8   KGVSDEFKGAVATIGNFDGVHLGHQQIFRKIVQEARQCQSKSVVITFDPHPKSVLHPEKR 67

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P + L+    + K+++ +    ++   F+LE +  +A  F+ ++L E L +K +  G  +
Sbjct: 68  PFYLLTTLDEKLKLIKSLEIDGVMLIPFSLEFSKTTATDFVCRILWEQLRIKKIFIGHDY 127

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG+ + G+   L + G+K GF     + ++     I+SS+ IR A+  G V  A  LLG
Sbjct: 128 TFGRGKEGNEEFLARYGKKLGFRVDVTNAVKVG-DIIISSTRIRNAICDGDVRLAGSLLG 186

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             + ++  V  G K G  LGFPTAN+     +L +EGVYA+      +  Y GV N GRN
Sbjct: 187 RPYNLKGSVAGGYKRGTQLGFPTANLDPEKLLLPREGVYAVVVELNGK-RYQGVLNIGRN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT   N  L +E  I DFS +IYG++  + F D +R EI+F + E L   +  D  +AR 
Sbjct: 246 PTF-GNENLTVELHILDFSDDIYGEKLELFFIDRIREEIRFDNPESLADQIRSDVAQART 304

Query: 308 ILE 310
           +LE
Sbjct: 305 VLE 307


>gi|109899484|ref|YP_662739.1| riboflavin biosynthesis protein RibF [Pseudoalteromonas atlantica
           T6c]
 gi|109701765|gb|ABG41685.1| FMN adenylyltransferase [Pseudoalteromonas atlantica T6c]
          Length = 308

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 7/301 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +L +  +G V+ IG FDG+HLGH  +L Q +  A     P TV+ F P P  +    +  
Sbjct: 9   NLRDKHRGCVLTIGKFDGVHLGHQAVLSQVVVKARELGLPATVMVFEPQPEELFTPDNAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             LS    +   L+ +G   L+  KF    A+++AEQF++++LV+ L V+ ++ G  FRF
Sbjct: 69  ARLSLLRDKYVQLKALGVDRLLCLKFDKRFASFTAEQFVEQLLVKDLGVQFLVVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK R G+  +LQ  G K GF  V     R    +I SS+ +R AL++ +   A  +LG  
Sbjct: 129 GKGRVGNFAMLQVEGRKCGFSVVSTQSFRLEDCRI-SSTEVRNALSENNFSLAEKMLGRP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           FTI   V+HG+K GRT+GFPTAN+ L        GV+A++     + +YSGVAN G  PT
Sbjct: 188 FTISGKVLHGDKKGRTIGFPTANLLLKRCNAPINGVFAVQVDIAGK-AYSGVANIGTRPT 246

Query: 250 MVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +  NG    LE  IF F+  +YG   +V+    LR EIKF   E+L   +  D ++A+++
Sbjct: 247 V--NGQRSQLEVHIFHFTGNLYGHFISVAIKAKLRNEIKFDSFEQLHQQIQRDAEQAKQL 304

Query: 309 L 309
           L
Sbjct: 305 L 305


>gi|152979534|ref|YP_001345163.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Actinobacillus succinogenes 130Z]
 gi|150841257|gb|ABR75228.1| riboflavin biosynthesis protein RibF [Actinobacillus succinogenes
           130Z]
          Length = 317

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 11/305 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++L  + +   + IGNFDG+HLGH  +L    + A+  N P+ V+ F P PR   Q    
Sbjct: 8   RNLQQNFEHCALTIGNFDGVHLGHQAVLRHLREKADSLNLPVVVMLFEPQPREYFQGERA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     +   L++ G   +I  KF    A  +AE+FI + LV  L V  +  G  FR
Sbjct: 68  PARLMRLRDKLHYLDEAGVDFVICVKFDRTFATLTAEEFICQWLVRKLNVSFLSIGDDFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R GD  +LQ+ G K+GF TV  +   +   Q +SS+ IRTAL   ++  A  LLG 
Sbjct: 128 FGANREGDFTLLQQSGSKFGF-TVEDNSTFHLCEQRISSTAIRTALADDNLALAESLLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-------YSGV 241
            + I   V+HG+K+GRT+GFPTAN++L   +   +GVYA++ R +           + G+
Sbjct: 187 PYRIFGKVVHGKKLGRTIGFPTANIRLQRQVNPVKGVYAVKVRCEADVRGEKCGRIFEGI 246

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G+ PT V     LLE  +FDF+ ++YGQ  +V F   +R E+KF  ++ L+  + +D
Sbjct: 247 ANIGQRPT-VDGVKQLLEVHLFDFNSDLYGQTISVEFCKKIRNEVKFPSLDALQAQIRQD 305

Query: 302 EKKAR 306
              A+
Sbjct: 306 ALTAK 310


>gi|85704413|ref|ZP_01035515.1| riboflavin biosynthesis protein RibF [Roseovarius sp. 217]
 gi|85670821|gb|EAQ25680.1| riboflavin biosynthesis protein RibF [Roseovarius sp. 217]
          Length = 312

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 7/289 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIGNFDG+H+GH  ++E A        +P+ +L+F PHPR      +P F L   
Sbjct: 15  RGASAAIGNFDGVHIGHRSVIELARTAGERIGAPLGILTFEPHPREYFAPDAPPFRLMGR 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   LEK+G   L    F    A  S   F + V+ + L ++ V+ G  F FGK RAG
Sbjct: 75  EARAHRLEKLGVERLYEINFNAGLAALSPRAFAETVIRDGLGLRHVVVGADFCFGKGRAG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +LQ+ G+  GF       L     Q VSS+ IR AL++G    AA +LG+   I+  
Sbjct: 135 NATMLQEFGDDMGFDVTIATLLEGEIGQ-VSSTAIRAALSEGAPRAAAAMLGHWHRIDGP 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGVANFGRNPTMVP 252
           VI GE+ GRTLG+PTANM +      K G+YA+     D   +  Y G A+ G  P M  
Sbjct: 194 VIGGEQRGRTLGYPTANMSIKGLHPPKFGIYAVLVDVLDGPHKGQYHGAASLGVRP-MFQ 252

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
                +E+FIFDF+ ++YG   +V   +YLRPE  F  +E     M  D
Sbjct: 253 GEEANIETFIFDFTGDLYGANLSVGLIEYLRPEATFDSLEAFIAQMDAD 301


>gi|73662802|ref|YP_301583.1| riboflavin kinase; FAD synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495317|dbj|BAE18638.1| riboflavin kinase; FAD synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 323

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/320 (36%), Positives = 179/320 (55%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           + V H I+ NQ +   +    +A G FDG+H GH  + E   A   + N    V++F+PH
Sbjct: 4   IEVAHPIQDNQYITEAV---AMAFGFFDGMHKGHAKVFETLDAKAKSQNLKKAVMTFDPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P   + +ILE  G    I   F+ + A  +AE+FIQ  +++   
Sbjct: 61  PSVVLNPKLKRTDYLTPIQDKVEILESYGIDYCIVINFSSKFAEVTAEEFIQDYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  IL +  E   F+T  + + +  +S+ +S+++IR +L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMMILDEMSE---FNTTVVSK-QEIESEKISTTDIRKSLKTG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQ-DQ 235
            +  A   LGYR+ I+  V+ GEK GRT+GFPTAN+Q S D +L K GVYA+      ++
Sbjct: 176 DLQKANEELGYRYRIKGTVVQGEKRGRTIGFPTANVQPSGDYVLPKNGVYAVSMEIGVNK 235

Query: 236 TSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +Y GVAN G  PT        +++E  +FDFS+ IYG+R TV +  YLRPEIKF  I+ 
Sbjct: 236 ETYRGVANVGVKPTFHDPSKAQVVIEVNLFDFSENIYGERVTVYWHHYLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D++KA+ +L   +
Sbjct: 296 LVEQMNKDKEKAKYLLSVDF 315


>gi|222056460|ref|YP_002538822.1| riboflavin biosynthesis protein RibF [Geobacter sp. FRC-32]
 gi|221565749|gb|ACM21721.1| riboflavin biosynthesis protein RibF [Geobacter sp. FRC-32]
          Length = 319

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 9/301 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV +GNFDG+HLGH  I  +  K A +S     V++F PHP  ++        ++ 
Sbjct: 14  LTNAVVTVGNFDGVHLGHREIFRKVKKAAADSGGVSVVVTFIPHPLKVLAPQKSPQLINT 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            + +E ++E  G   L+   F  + A+ +A  F+  +LV  L +  +I G  + FG++R 
Sbjct: 74  YAEKETLIEASGIDYLVEIAFDHQFASTTARDFVANILVGKLGMSKLIIGYDYAFGRNRE 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           G+  +L   G+++ F    ++EL+  +N S I SS+ IR  +  G V     LLG  F++
Sbjct: 134 GNVSLLTLLGDEFSFK---VEELKPISNGSTIFSSTAIRKMIASGDVKGVVPLLGRHFSV 190

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V+HG   G+ LGFPTAN++   ++L K+GVYA++ +  D   Y+G  N G NPT   
Sbjct: 191 GGTVVHGHHRGKGLGFPTANLETEKELLPKDGVYAVKVKV-DGVFYAGACNIGTNPTF-K 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           N  L +E F+FDF  ++Y +   V F D +R E  F D+  L+  + +D ++ R IL  +
Sbjct: 249 NHALSVEVFLFDFEGDLYQKEIRVYFIDRIRDEKSFADVSSLQQAIADDIQRCRDILSKA 308

Query: 313 Y 313
           +
Sbjct: 309 F 309


>gi|294828319|ref|NP_713629.2| riboflavin biosynthesis protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293386171|gb|AAN50647.2| riboflavin biosynthesis protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 318

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 178/315 (56%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M  FH IE  Q+        VV +GNFDGIHLGH  +L+Q +K++  + ++  V++++P+
Sbjct: 1   MITFHTIE--QAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   + +  L     +E+ + + G   L+   F  E A  +AE F++++L++ L+ 
Sbjct: 59  PAIVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK R G+  +L++  EK  +    +D +  N +++ SSS +R  +T+G+
Sbjct: 119 KNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLNDTKL-SSSYVRRLITEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           V  A H L   ++I   V+ G K GR +GFPTAN++ + DILL   GVYA      +   
Sbjct: 178 VKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNMDILLPGIGVYA-GLTQVEGIE 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N GRNPT   N  L LES IFDF ++IY Q   + F + +R EIKF  +E L   
Sbjct: 237 YPSMINIGRNPTFGINS-LTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQ 295

Query: 298 MGEDEKKARKILESS 312
           + +DE   R IL+S+
Sbjct: 296 LKQDEILTRNILKST 310


>gi|148828140|ref|YP_001292893.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittGG]
 gi|148719382|gb|ABR00510.1| hypothetical protein CGSHiGG_08390 [Haemophilus influenzae PittGG]
          Length = 308

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 168/302 (55%), Gaps = 14/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G+  +LQ   +++GF    +++ R+    +Q +SS+ IR AL    +  A +LLG  +
Sbjct: 132 RQGNFAMLQAASKRFGF---IVEDNRSFCLDAQRISSTAIREALANDDLQLAENLLGKPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    ++GVAN G+ PT+
Sbjct: 189 RIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIFNGVANMGKRPTI 248

Query: 251 VPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             NG + LLE  +FDFSQ IYGQ   V F   +R EIKF     LK+ + +D + A+   
Sbjct: 249 --NGLMQLLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFGDLKVQIEKDVETAKAFF 306

Query: 310 ES 311
            S
Sbjct: 307 NS 308


>gi|220936372|ref|YP_002515271.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997682|gb|ACL74284.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 308

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 166/312 (53%), Gaps = 24/312 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HN+      P H +G V  IGNFDG+HLGH  +L Q  + A     P TV+SF P PR  
Sbjct: 8   HNLR-----PRH-RGTVATIGNFDGLHLGHQAVLGQLAEKAAELGLPTTVISFEPLPREY 61

Query: 63  IQSSSPIFTLSPPSIQ---EKILEKMGFSA--LIRYKFTLETANYSAEQFIQKVLVEWLE 117
                     +PP +Q   +K L    FS   L+  +F    A   A  F++ +L E L 
Sbjct: 62  FLGDK-----APPRLQRFRDKFLALRRFSVDRLLCLRFDRRLAEQEASAFVEDLLAERLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK ++ G  FRFG+ R+GD  +L++ G+++GFH   +   + + ++ VSS+ IR AL  G
Sbjct: 117 VKYLVVGDDFRFGRKRSGDFQLLRELGQRHGFHVARMHSFQVDGAR-VSSTRIREALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  LLG  + +   V HG+K GRT+GFPTAN+++ P  L   GVYA+     +   
Sbjct: 176 DMDTAQKLLGRPYRLNGRVAHGDKRGRTIGFPTANLRMGPRPLAVRGVYAVEVFGLNGDP 235

Query: 238 YSGVANFGRNPTMVPNGPL--LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             GVAN G  PT+   G L   LE  +FD   ++YG+   V     +R E +F+ ++ LK
Sbjct: 236 VRGVANVGTRPTV---GGLENRLEVHLFDVDADLYGRVLHVDLLARIREEQRFESLDALK 292

Query: 296 IYMGEDEKKARK 307
             +  D ++AR+
Sbjct: 293 AQIARDAQQARQ 304


>gi|89093565|ref|ZP_01166513.1| hypothetical protein MED92_18273 [Oceanospirillum sp. MED92]
 gi|89082255|gb|EAR61479.1| hypothetical protein MED92_18273 [Oceanospirillum sp. MED92]
          Length = 310

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 161/291 (55%), Gaps = 5/291 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V  IGNFDG+HLGH  +L Q    A     P  V++F P PR           L+  
Sbjct: 15  RGCVATIGNFDGVHLGHRQVLAQVKAKAQELGLPSVVITFEPQPREFFAGDKAPPRLTRF 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S + ++L+  G    +   F     + +AEQF++++L+  L V+  + G  FRFG DR+G
Sbjct: 75  SEKYRLLQAEGMDRHLCLTFNERLRSMTAEQFVEELLLRGLAVEHFVVGDDFRFGCDRSG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L + GE++GF TV   E   ++ + VSS+ +R  L    +  AA LLG  +T+   
Sbjct: 135 DYEMLSQAGERHGF-TVVNTETFLSEEERVSSTRLRHVLEANDLATAAALLGRPYTVSGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+K+GR LG PTAN+++        GVYA+    Q   +  GV N G  PT+    P
Sbjct: 194 VMHGQKLGRQLGVPTANVRMHRFPCPLRGVYAVEVTGQTLKA-QGVCNVGLRPTVCGQQP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +LE+ +FDF ++IYGQ  TV F  ++R E KF  I++LK  + +D ++ R
Sbjct: 253 -VLETHLFDFDKDIYGQLLTVEFKQFIREERKFDGIDQLKEQIFKDIEEVR 302


>gi|126666690|ref|ZP_01737667.1| hypothetical protein MELB17_19591 [Marinobacter sp. ELB17]
 gi|126628735|gb|EAZ99355.1| hypothetical protein MELB17_19591 [Marinobacter sp. ELB17]
          Length = 326

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 163/302 (53%), Gaps = 15/302 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V  +GNFDG+H GH  ILEQ    A  +N P  V+ F P P+   +       L+  
Sbjct: 23  RGCVATVGNFDGVHRGHQAILEQVKTQAAKHNLPSVVVIFEPQPQEFFRGVDAPPRLTGF 82

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G  A++  +F  +   +SA  F+  +L++ L VK ++ G  FRFG DR+G
Sbjct: 83  RQKVEALRGQGIDAVLCLRFDEQFRQFSAWGFVDSLLIQGLAVKHLVVGDDFRFGCDRSG 142

Query: 136 DRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           D   L+K G   GF      TV I+  R      VSS+ IR  L    + +A H LG+++
Sbjct: 143 DFNFLEKVGADAGFTVENTRTVVIEGDR------VSSTRIRKLLADNQLDSAEHFLGWKY 196

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   +++G ++GR +G PTAN++L+    L+ GVY ++ R  D T + G+AN G  PT+
Sbjct: 197 HIAGRIVYGRQLGREIGAPTANIRLAQIPALR-GVYVVKVRLADGTLHDGIANIGLRPTV 255

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               P  LE  +FD++  +YGQR  V+F   LR E++F+ +  LK  + +D   AR+ L 
Sbjct: 256 DGKHP-ALEVHLFDYAGMLYGQRLDVTFHHGLRDEVRFESVGALKTQIAKDFSSARRWLA 314

Query: 311 SS 312
            S
Sbjct: 315 ES 316


>gi|85709709|ref|ZP_01040774.1| riboflavin biosynthesis protein [Erythrobacter sp. NAP1]
 gi|85688419|gb|EAQ28423.1| riboflavin biosynthesis protein [Erythrobacter sp. NAP1]
          Length = 308

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 9/308 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           H  ++ Q+L    +G V+A+GNFDG H GH  +  +AI+ A+    P  + +F+PHP   
Sbjct: 6   HREQVTQAL----RGAVIALGNFDGFHRGHQAVAGEAIRWAHEEGRPSIIATFDPHPVRF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +   P F L+    ++++    G +A++ + F  E A   AE FI  +L+E      V+
Sbjct: 62  FRPDVPPFRLTTLEQRQELYLAAGATAMLVFHFDGELAGTPAEDFITDILIERFGAYGVV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
           TG  F FGK   G+  +L+  G + G  +  ++ +  +   +VSSS +R AL +G    A
Sbjct: 122 TGGDFTFGKGAKGNVDLLRDFGSQKGLKSRVVEAVEGH-GDVVSSSRVREALREGKPELA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGV 241
           A LL   F I   V HG+K GR LG+PTAN+ +   +  K GVYA+  +         G 
Sbjct: 181 AELLTRPFAIRGIVEHGDKNGRKLGYPTANLAIDTYLRPKYGVYAVTGKILATGQELKGA 240

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  P   P    LLE + FDFS ++YGQ   V+F  +LR E +F  ++ L + M  D
Sbjct: 241 ANIGIRPQFEPPKE-LLEPYFFDFSGDLYGQEIEVAFHHFLRGEARFDSLDDLMVQMERD 299

Query: 302 EKKARKIL 309
             +AR++L
Sbjct: 300 CDRARELL 307


>gi|313623915|gb|EFR94025.1| riboflavin biosynthesis protein RibF [Listeria innocua FSL J1-023]
          Length = 314

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 167/290 (57%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMADLGVDIMYVVRFTTQFSELSPQAFVDKYLVA-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+      G   V I + +   S  +SS+NIR A+T+G +  A  LL   +T +  VI
Sbjct: 140 TELENYAN--GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLXXXYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTR 306


>gi|193213429|ref|YP_001999382.1| riboflavin biosynthesis protein RibF [Chlorobaculum parvum NCIB
           8327]
 gi|193086906|gb|ACF12182.1| riboflavin biosynthesis protein RibF [Chlorobaculum parvum NCIB
           8327]
          Length = 321

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 8/307 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H+ E  Q +    +   V +G+FDG+H+GH  I+   I  A    +   V++F+PHPR +
Sbjct: 12  HDAETGQVVSLKPEPSAVTVGSFDGLHVGHRKIIGTMIDKARQDGLRSVVVTFDPHPRLV 71

Query: 63  IQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           ++SSS        +  EK+     M    L   +F  E +  S+  FI+ VLV+ L  + 
Sbjct: 72  LESSSDCQVQLLTTFDEKVAHFRTMQVDLLFVIRFDREFSRKSSADFIRDVLVKMLGARQ 131

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G    FG DR+G    L++ GE++GF    + E+  + S  VSS+ IR  L +G + 
Sbjct: 132 VTVGYDHGFGSDRSGSGKTLRQLGEEHGFRVEVVGEIIVDGSP-VSSTRIRHLLAEGRIR 190

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSY 238
            A   LG  +TI  +V++G+K+GR +GFPTAN++LS     L   GVYA R  T D   +
Sbjct: 191 EANVCLGTPYTISGEVVNGKKLGRQIGFPTANLELSDRCKHLPAHGVYAARV-TIDGRDW 249

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             + N GR PT+  +G + +E+ I  FS E+YG    +   D++RPE  F  I++LK  +
Sbjct: 250 PVMMNIGRRPTVEEHGAVTVEAHIVGFSGELYGAVLVLQLLDFIRPEQCFDSIDELKAQL 309

Query: 299 GEDEKKA 305
             D+KKA
Sbjct: 310 LADQKKA 316


>gi|307543905|ref|YP_003896384.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Halomonas
           elongata DSM 2581]
 gi|307215929|emb|CBV41199.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Halomonas
           elongata DSM 2581]
          Length = 343

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 14/301 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+H GH  IL+Q ++ A +   P TV+ F P PR           L+   
Sbjct: 16  GCVATIGNFDGVHRGHQAILDQLLERARSLSLPATVVVFEPQPREFFAGDQAPPRLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++L + G   ++   F     + +A  FI++VLV+ L V+ ++ G  FRFG DR GD
Sbjct: 76  DKVRLLAEYGADRVLCLPFNDALRSLTARAFIEQVLVQGLGVRHLVVGDDFRFGCDRRGD 135

Query: 137 RGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ  G   GF      T  +D  R      VSS+ +RT L  G+   AA +LG  + 
Sbjct: 136 FELLQTVGTGSGFEVEHTRTFLLDGER------VSSTRVRTMLASGNFDQAARMLGRPYR 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           +   V+   ++GRT+G PTAN+   P  L  +GVYA++          GVAN G  PT+ 
Sbjct: 190 LGGRVMRDRQLGRTIGVPTANLPQPPHPLALQGVYAVKVELPGGRHAEGVANIGWRPTVG 249

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              P +LE  +FDF +++YG+R TV     LR E+KF  +E LK  +G D+ +AR+    
Sbjct: 250 SQRP-VLEVHLFDFDEDLYGERLTVLPCAKLRGEMKFDGLEALKAQIGADQARARRFFAE 308

Query: 312 S 312
           +
Sbjct: 309 T 309


>gi|330447397|ref|ZP_08311046.1| riboflavin biosynthesis protein RibF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491588|dbj|GAA05543.1| riboflavin biosynthesis protein RibF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 320

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 165/319 (51%), Gaps = 16/319 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+     P H  G V+ IGNFDG+HLGH  +L+Q +  A+    P TV++F P P  +
Sbjct: 8   HNIQ-----PQH-HGCVLTIGNFDGVHLGHQTLLQQVVAKAHAMQLPATVMTFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    L+    +   L+K+G   L+   F    AN SAE F++++LV+ L VK ++
Sbjct: 62  FAGDNAPARLTRFRDKYLQLKKVGIDRLLCISFNHHFANMSAEDFVERLLVKQLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFGKDR G   +L   G K+GF  V       ++ Q VSS+ IR AL    +  A
Sbjct: 122 IGDDFRFGKDRCGSFDMLVAAGLKHGFEVVSTQSFCVSE-QRVSSTAIRQALANDDLEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG  ++I   V HG K+GRT+ FPTAN+ L   +    GVYA+           GVA
Sbjct: 181 EMMLGRPYSITGRVSHGRKLGRTIDFPTANIPLKRRVTPVSGVYAVEVYGAASGPIMGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE  +FDF  ++YG++  V     LR E KF+  + LK  +  D 
Sbjct: 241 NVGNRPT-VKGVRRQLEVHLFDFKADLYGRQLEVVLRHKLRDEKKFESFDALKCQIERDA 299

Query: 303 KKARKILESSYPLSERDRI 321
           + AR        LSER+ +
Sbjct: 300 QTAR------VWLSERNNV 312


>gi|219871120|ref|YP_002475495.1| riboflavin biosynthesis protein [Haemophilus parasuis SH0165]
 gi|219691324|gb|ACL32547.1| riboflavin biosynthesis protein [Haemophilus parasuis SH0165]
          Length = 325

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/308 (36%), Positives = 171/308 (55%), Gaps = 23/308 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG  + IGNFDG+HLGH  IL++ ++ AN    P  V+ F P PR           L+ P
Sbjct: 28  KGCALTIGNFDGVHLGHQQILKRLLEKANTLRLPSVVMIFEPQPREFFAKKQD--KLTAP 85

Query: 76  S----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           +    +++KI  L+++G   L+  +F  + A    EQFI+ +LV+ L VK +  G  F+F
Sbjct: 86  ARLMRLRDKIHALQEIGVDYLLCVRFNSQFAQLQPEQFIRHLLVDKLNVKYLSVGDDFQF 145

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKGHVLNAAH 184
           G  R+G    LQ+ G+++GF      ++ N+ S     Q +SSS IR AL   ++  A  
Sbjct: 146 GYKRSGTFDSLQQAGKQFGF------DVENSHSHCLGQQRISSSLIRDALHNDNLQLAEK 199

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  + I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++ +T     ++G+AN 
Sbjct: 200 MLGKPYAICGRVAHGNKLGRTIGFPTANLMLNRLVTAIQGVYAVKVKTPAGV-FNGIANV 258

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+    P LLE  +FDF   IYGQ   V F   +R EIKF   ++LK+ + +D + 
Sbjct: 259 GNRPTINGTKP-LLEVHLFDFDNSIYGQAIEVRFLKKVRSEIKFASFDELKLQIEKDVQA 317

Query: 305 ARKILESS 312
            R   + +
Sbjct: 318 VRLFFQEA 325


>gi|237747568|ref|ZP_04578048.1| riboflavin kinase [Oxalobacter formigenes OXCC13]
 gi|229378930|gb|EEO29021.1| riboflavin kinase [Oxalobacter formigenes OXCC13]
          Length = 318

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 160/293 (54%), Gaps = 8/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            + IGNFDG+H GH ++L Q  + A+  + P  VL+F+PHPR      S     +P +I 
Sbjct: 17  ALTIGNFDGVHRGHMVLLAQLREAADRLHLPAAVLTFSPHPRQYFAFQSDKSVTAPATIT 76

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             +EKI  L + G   +    F   TA+ +AEQFI+++LV  L VK +I G KFRFGK R
Sbjct: 77  PLREKIQALSQCGVDQVTIAHFDHLTASLTAEQFIEQILVRALGVKWLIIGEKFRFGKGR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G   +L+  G+KYGFH   +  + N+++  +SSS IR AL +      A LL   + + 
Sbjct: 137 LGTTDMLKDAGKKYGFHVEVLPAV-NDENGRISSSCIRKALEESDFPKVAELLEKPYMMS 195

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+KIGR LGFPTAN+ +     +  GV+  +           V+  G  PT+  +
Sbjct: 196 GHVVHGDKIGRDLGFPTANLPIRHYNPILSGVFITQVHGLSDEPLPSVSMIGTRPTIESD 255

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             ++LE+ I DF +  YG+   + F   LR   KF D+  LK  +G+D + AR
Sbjct: 256 RHIMLETHILDFDRICYGKLIAIEFLKKLRDNQKFPDLNALKTAIGKDVETAR 308


>gi|166713093|ref|ZP_02244300.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 338

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 163/312 (52%), Gaps = 8/312 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P    G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++P   L+    + + L   G  ++   +F    +  SAE F+   LV  L  + 
Sbjct: 61  EFFAPAAPPPRLTLARAKIEGLHGFGADSVGMLRFDGRLSKMSAEDFVHLALVGRLCARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G +FRFG  R GD G+L   GE++GF    I  +  +  +I S++ IR  L  G   
Sbjct: 121 VWIGPEFRFGHRRGGDIGLLHALGEQHGFVAGEIAPVHLHGERI-SATRIRELLVAGQFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +T +  
Sbjct: 180 HAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PCTPALSGIYATWVHGVAETPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+++FDF  ++YG+   V F   LR E KF  +E L + M  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEAYLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMHH 297

Query: 301 DEKKARKILESS 312
           D ++AR +L +S
Sbjct: 298 DAEQARAVLAAS 309


>gi|238924300|ref|YP_002937816.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Eubacterium
           rectale ATCC 33656]
 gi|238875975|gb|ACR75682.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Eubacterium
           rectale ATCC 33656]
 gi|291525071|emb|CBK90658.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium rectale DSM
           17629]
          Length = 309

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 164/298 (55%), Gaps = 10/298 (3%)

Query: 9   INQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT-IIQ 64
           I+++L  H+K   V++ G FDG+H GH  ++E+ I+ +N       + +F+  P++ ++ 
Sbjct: 4   ISKTLDFHVKEPSVISFGKFDGLHRGHEFLMEKQIEQSNLHGYKRIIFTFDIPPKSEVLG 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             S +   +    +E + EK G   LI   F  +     A+ F+ + +V+ L VK +I G
Sbjct: 64  VESKVIITNDE--KEYVFEKSGIDYLIECPFVPQVMTMEADAFV-RWIVKSLNVKCIIVG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG +RAGD  +L     + G+  + +D++++    I SS+ IR  +  GH+  A  
Sbjct: 121 DDFRFGHNRAGDHRLLSAMAGELGYELIVVDKIKDGDRDI-SSTYIREEIAAGHIKKANE 179

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVAN 243
           LLGY F I+  V+HG  +GRT+G PT N+ +  D LL  +GVY  R   +D   Y GV N
Sbjct: 180 LLGYPFFIKGRVVHGRALGRTIGIPTVNLSVPHDKLLPPKGVYMSRVLVRDNW-YLGVTN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            G  PT+    P+  E++I DF Q++YGQ   V    ++RPE+KF  IE LK  M  D
Sbjct: 239 IGCKPTIEGKNPIGAETYIIDFGQDVYGQDIMVELHKFVRPEMKFDSIEALKSQMSAD 296


>gi|325845620|ref|ZP_08168904.1| riboflavin biosynthesis protein RibF [Turicibacter sp. HGF1]
 gi|325488318|gb|EGC90743.1| riboflavin biosynthesis protein RibF [Turicibacter sp. HGF1]
          Length = 305

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 174/303 (57%), Gaps = 8/303 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ 64
           + +NQ+  N  +G  VA+G FDG+H+GH L++++AI+ A  + +   V++F+P+P  I++
Sbjct: 4   LNLNQTSFNSEEGLSVALGYFDGLHIGHQLVIKEAIEYAKKNGLKSAVMTFSPNPNVILK 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             S    ++PP+ + ++L ++G   L+   F  E A+  A  FI++ LV+  +V+ V TG
Sbjct: 64  KLSSEHLITPPTEKVRLLTELGVDYLMILTFNEELASLRAIDFIERYLVK-TKVEHVSTG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFGK   G   +L++  EK+  +     E+   K   + ++ I++ L  G++  A  
Sbjct: 123 FDFRFGKKGEGSVELLRQYPEKFSLNVTDKKEIEGEK---IGATEIKSYLAVGNIEKANE 179

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVAN 243
           +LG  +T+   VI G++ GR +GFPTAN+  +   I+ K GVYA+R   + Q SY+G+ N
Sbjct: 180 MLGRPYTLCGTVISGQQKGRQIGFPTANVATTEAYIIPKNGVYAVRVWVKGQ-SYAGMCN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT      + +E  I DF+Q+IYGQ   V F+  LR E +F  IE L   +  D K
Sbjct: 239 IGHNPTFNFIDNVSVEVHILDFNQDIYGQEMKVEFYHRLRDEERFSSIEALMTQLNHDRK 298

Query: 304 KAR 306
             R
Sbjct: 299 TVR 301


>gi|298207391|ref|YP_003715570.1| Riboflavin kinase / FAD synthetase [Croceibacter atlanticus
           HTCC2559]
 gi|83850027|gb|EAP87895.1| Riboflavin kinase / FAD synthetase [Croceibacter atlanticus
           HTCC2559]
          Length = 307

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 10/298 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  VV IG FDG+H+GH  I+ + +  A    + +L+F PHPR ++Q  + I  L     
Sbjct: 14  KNTVVTIGTFDGVHIGHQKIVNRLVNQAELDSV-ILTFFPHPRMVLQQDNTIKLLHTIEE 72

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +LE++G   L+ + FT E +  +A+QF++ +LV  L+ K +I G   RFG++R  D 
Sbjct: 73  KTTVLEQLGLDHLVIHPFTKEFSRLTAQQFVENILVNQLKAKKIIIGYDHRFGRNRTADI 132

Query: 138 GILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +  GE+YGF    ++E+  ++     VSS+ IRTAL KG +  A   LG  + +   
Sbjct: 133 STFKDFGEQYGF---VVEEITKQDVDDVAVSSTKIRTALQKGQIEKANAFLGQPYMLTGT 189

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           ++ G+ IG+TLG+PTAN+Q+     ++ K GVY ++   +  T Y G+ N G NPT V  
Sbjct: 190 IVKGKGIGKTLGYPTANIQIEEAYKLIPKNGVYIVKTNFKGIT-YFGMMNIGTNPT-VGG 247

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +E++ F+   ++YG + T+     +R E KF  +++L   M  DEK +   +E+
Sbjct: 248 KSQTIETYFFNMDTDLYGSKMTIQMLKRIRDEKKFASVDQLIEAMQNDEKISINYIET 305


>gi|255067969|ref|ZP_05319824.1| riboflavin biosynthesis protein RibF [Neisseria sicca ATCC 29256]
 gi|255047746|gb|EET43210.1| riboflavin biosynthesis protein RibF [Neisseria sicca ATCC 29256]
          Length = 317

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/310 (36%), Positives = 168/310 (54%), Gaps = 19/310 (6%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS---P 68
           P+  +G  V IGNFDG+HLGH  IL++    A+  N P+ V+ F P P+      +   P
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHILQKLKNEADSRNLPVIVVIFEPQPKEFFSQKAGFTP 70

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              +SP   +  +L   G   A+   +F  E A+ SA+ FI K+L + L  + ++ G  F
Sbjct: 71  PCRISPLRTKLDLLSDTGCIDAVWVLRFNQEFADMSAQDFIDKLLRQTLNTRYLLIGDDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R G   +L+++ +     T  V ++++R       SS+ +R ALT G++  A  L
Sbjct: 131 RFGAGREGCFDLLKQQSDIQTERTPSVIVEDIR------TSSTAVREALTDGNLAYAKKL 184

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT--SYSGVAN 243
           LG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +     D T  +  GVA+
Sbjct: 185 LGHDYVLSGKVKHGKKLGRTINAPTANIQLPPHRYPLRGVFVVE---ADGTFGTRRGVAS 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           FG NPT+  N    LE  +FDF   +YGQR  V F   LR E KF DIE LK  + +D +
Sbjct: 242 FGLNPTVSSNNSQKLEVHLFDFEGNLYGQRLKVRFLHKLRDEQKFSDIEALKRQIEQDIE 301

Query: 304 KARKILESSY 313
           +A++  E+ Y
Sbjct: 302 EAKQWQETDY 311


>gi|291529166|emb|CBK94752.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium rectale
           M104/1]
          Length = 309

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 164/298 (55%), Gaps = 10/298 (3%)

Query: 9   INQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT-IIQ 64
           I+++L  H+K   V++ G FDG+H GH  ++E+ I+ +N       + +F+  P++ ++ 
Sbjct: 4   ISKTLDFHVKEPSVISFGKFDGLHRGHEFLMEKQIEQSNLHGYKRIIFTFDIPPKSEVLG 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             S +   +    +E + EK G   LI   F  +     A+ F+ + +V+ L VK +I G
Sbjct: 64  VESKVIITNDE--KEYVFEKSGIDYLIECPFVPQVMTMEADAFV-RWIVKSLNVKCIIVG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG +RAGD  +L     + G+  + +D++++    I SS+ IR  +  GH+  A  
Sbjct: 121 DDFRFGHNRAGDHRLLSAMAGELGYELIVVDKIKDGARDI-SSTYIREEIAAGHIKKANE 179

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVAN 243
           LLGY F I+  V+HG  +GRT+G PT N+ +  D LL  +GVY  R   +D   Y GV N
Sbjct: 180 LLGYPFFIKGRVVHGRALGRTIGIPTVNLSVPHDKLLPPKGVYMSRVLVRDNW-YLGVTN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            G  PT+    P+  E++I DF Q++YGQ   V    ++RPE+KF  IE LK  M  D
Sbjct: 239 IGCKPTIEGKNPIGAETYIIDFGQDVYGQDIMVELHKFVRPEMKFDSIEALKSQMSAD 296


>gi|288921721|ref|ZP_06415988.1| riboflavin biosynthesis protein RibF [Frankia sp. EUN1f]
 gi|288346893|gb|EFC81203.1| riboflavin biosynthesis protein RibF [Frankia sp. EUN1f]
          Length = 309

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 164/299 (54%), Gaps = 6/299 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++ P    GGVV IG FDG+HLGH  I+ +A+++A       TVL+F+PHP  +++  + 
Sbjct: 8   ENTPEDWPGGVVTIGFFDGVHLGHRRIVGRAVELARQRGQRSTVLTFDPHPAEVLRPGTH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++L  +G  AL    FTLE +   AE+F+++VLV  L   TV+ G  F 
Sbjct: 68  PAQLTTLRYKAELLAAIGVDALCVAPFTLEFSRIPAEEFVRQVLVGRLRATTVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G   AG+   L + G   GF    I  +R ++ +++SS+ IR  +  G V  AA  LG 
Sbjct: 128 YGHRAAGNVESLARDGRAEGFEVEGIGLVRADE-KVLSSTEIRRRVAAGDVEGAAAALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              +E  V+HG+  GRT+G+PTAN+Q +P   +  +GVYA      DQ   + + + G N
Sbjct: 187 PHRVEGVVVHGDARGRTIGYPTANLQCAPWSAIPDDGVYAGFASWSDQRRAAAI-SIGTN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT        +E+F+ DF  ++YG+  T  F   LRP ++F  +++L   MG D  + R
Sbjct: 246 PTF-EGRDRRVEAFLLDFDGDLYGEYMTYEFTRRLRPTLRFDSVDELVEQMGRDVDETR 303


>gi|89072553|ref|ZP_01159125.1| hypothetical protein SKA34_18549 [Photobacterium sp. SKA34]
 gi|89051657|gb|EAR57110.1| hypothetical protein SKA34_18549 [Photobacterium sp. SKA34]
          Length = 320

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 164/319 (51%), Gaps = 16/319 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           HNI+     P H  G V+ IGNFDG+HLGH  +L Q +  A+   +  TV++F P P  +
Sbjct: 8   HNIQ-----PQH-HGCVLTIGNFDGVHLGHQALLRQVVAKAHAMQLSATVMTFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L+K+G   L+   F    A  SAE F++ +LV+ L VK ++
Sbjct: 62  FAGDKAPARLTRFRDKYLQLKKVGIDRLLCVNFNHHFATMSAEDFVECLLVKQLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+ R GD  +L + G K+GF  V       ++ Q VSS+ IR AL K  +  A
Sbjct: 122 IGDDFRFGQGRNGDFSMLVEAGRKHGFEVVSTQSFCVSE-QRVSSTAIRQALAKNELEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D     GVA
Sbjct: 181 EMMLGRPYSIRGRVSHGRKLGRTIGFPTANIPLKRRVTPVAGVYAVEVYGADSRPVMGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE  +FDF  ++YG +  V     LR E KF+  + LK  +  D 
Sbjct: 241 NVGHRPT-VKGVRQQLEVHLFDFQADLYGHQLEVVLRHKLRDEKKFESFDALKRQIERDA 299

Query: 303 KKARKILESSYPLSERDRI 321
           + AR        LSER+ +
Sbjct: 300 QAAR------VWLSERNNV 312


>gi|323492573|ref|ZP_08097719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           brasiliensis LMG 20546]
 gi|323313175|gb|EGA66293.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           brasiliensis LMG 20546]
          Length = 314

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 162/305 (53%), Gaps = 12/305 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+     P+H +G V+ IGNFDG+HLGH  +L Q  + A     P TV++F+P P  +
Sbjct: 8   HNIK-----PHH-QGCVLTIGNFDGVHLGHQEVLRQVSEQAKELGLPSTVMTFDPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F  + AN + E FI  +LVE L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKFVQLSKLNIERLLCVNFNHKFANQTPEAFISDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG++R G+  +LQ+ G+KYGF  V     R  K + VSS+ IR AL +  +  A
Sbjct: 122 VGDDFCFGQNRKGNFAMLQEAGKKYGFEVVSTQSFRLAKLR-VSSTAIRQALAQDKLDAA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +           GVA
Sbjct: 181 AEMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVEALGLGDEPVGGVA 240

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  NG    LE  +FDF   +YG++  +   D +R E KF+  E LK  +  D
Sbjct: 241 NIGNRPTV--NGVRQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFEALKQQIELD 298

Query: 302 EKKAR 306
            + AR
Sbjct: 299 AEAAR 303


>gi|330994143|ref|ZP_08318071.1| Riboflavin biosynthesis protein ribF [Gluconacetobacter sp. SXCC-1]
 gi|329758610|gb|EGG75126.1| Riboflavin biosynthesis protein ribF [Gluconacetobacter sp. SXCC-1]
          Length = 319

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGH-HLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSP 68
           +++P+  +G V A+GNFDG+HLGH HL+   A++ A     + V++F PHPR + +   P
Sbjct: 10  RAIPDSARGTVAALGNFDGVHLGHAHLV--HALQAARPGRDLAVVTFEPHPRELFRPQDP 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L+    +   L  +G   + + +F  E +  SAE F+ +VL E L +K V  G  F 
Sbjct: 68  PFRLTLEQERFAALAALGVQHVFQIRFDHEFSAMSAEDFVTRVLHESLGLKHVACGLDFA 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG  R G+   L +R          +  L +      SS+ IR  L  G+   AA  LG 
Sbjct: 128 FGHRRRGNVDFLAERTRALDMGLTVVPPLSDGLGPY-SSTRIRRLLQDGYPERAAEELGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D T + GVAN GR P
Sbjct: 187 PWSIRGVVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVSVRLADGTVHPGVANIGRRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+       LE  +  F+ ++YGQ  +V+    LR E +F  ++ LK  +  D ++A   
Sbjct: 247 TINDGQESRLEVHLLGFAGDLYGQSLSVALHTLLRAERRFDGLDALKAQIARDSEQAAAY 306

Query: 309 LESSYP 314
           L S  P
Sbjct: 307 LSSRLP 312


>gi|84498580|ref|ZP_00997343.1| riboflavin kinase/ FMN adenyltransferase [Janibacter sp. HTCC2649]
 gi|84381113|gb|EAP96998.1| riboflavin kinase/ FMN adenyltransferase [Janibacter sp. HTCC2649]
          Length = 323

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 166/321 (51%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M   H        P+ L   VV +GNFDG+H GH  +L + ++I      P   ++F+PH
Sbjct: 1   MSTVHRFTDPAETPDELAPCVVTLGNFDGVHRGHKAVLSRLVEIGRERGLPSVAVTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++P S+++ +LE  G   L+   FT E A  S E+F++   V+ L+ 
Sbjct: 61  PLAVLHPDRAPEIITPSSVRDDLLEATGLDGLLVLGFTKEFAQQSPEEFVKGTFVDGLQA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G   RFG   +GD   L++ GE YGF  + ++++ + +    SS+++R ALT+G 
Sbjct: 121 KVVVVGVDTRFGYKNSGDVATLRELGETYGFEVIALEDVGDGERW--SSTSVRNALTEGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQD- 234
           V  AA +LG    +   V+HG   GR LGFPTAN  LSPD   ++  EGVYA      D 
Sbjct: 179 VAAAARVLGRPHRVVGTVVHGHHRGRELGFPTAN--LSPDSAGLVPAEGVYAGWLTRLDL 236

Query: 235 -----QTSYSGVANFGRNPTMVPNGPLLLESFI-FDFSQEIYGQRCTVSFFDYLRPEIKF 288
                  +     + G NPT        +E+++      ++Y +R  V F +++RP ++F
Sbjct: 237 DAGEPDRTMPAAISIGTNPTFDTKDRRTVEAYVLDRDDLDLYDERVVVEFVEHIRPTLRF 296

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             I+ L + M +D ++ R +L
Sbjct: 297 DSIDDLLVAMAKDVEQCRAVL 317


>gi|307824799|ref|ZP_07655022.1| riboflavin biosynthesis protein RibF [Methylobacter tundripaludum
           SV96]
 gi|307734157|gb|EFO05011.1| riboflavin biosynthesis protein RibF [Methylobacter tundripaludum
           SV96]
          Length = 327

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 176/307 (57%), Gaps = 17/307 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHP-RTIIQSSSPIFTLSPP 75
           G V+ IGNFDG+HLGH  ++++  +   A + P+ V++F P P    +  ++P   +   
Sbjct: 16  GCVLTIGNFDGLHLGHRAVIKKLAERGAALDLPVIVMTFEPQPLEYFLGENAPSRLMR-- 73

Query: 76  SIQEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            ++EK+++  K+    L+  +F    A+  AEQFI+ VLV+ L +K ++ G  F FGK R
Sbjct: 74  -LREKVIQFSKLPVDDLLILRFNQYFADCDAEQFIEDVLVKKLNIKHLVVGDDFHFGKAR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
            G+  +L+ +G+ +GF     D       Q+    VSS+ IR AL +G++  A  LLG  
Sbjct: 133 RGNFAMLKDKGKLFGF-----DVEDTGSYQVTGLRVSSTLIRDALGEGNLALAEKLLGCC 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +++   V HG+K GRT+G+PTAN+Q+        GV+A+     D   + GVAN G  PT
Sbjct: 188 YSVCGRVAHGDKRGRTIGYPTANIQMFRKNTPVNGVFAVTMTGIDGCEFDGVANVGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +     ++LE+ +FDF +EIYG+   V F   +R E++F+ +++LK+ + +D  +A+  L
Sbjct: 248 VDGGSKVILEAHLFDFDREIYGRYVEVHFKQKIRDEMRFQSLDELKVQIVKDVAEAKAAL 307

Query: 310 ESSYPLS 316
            S +  S
Sbjct: 308 SSLHACS 314


>gi|52425807|ref|YP_088944.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307859|gb|AAU38359.1| RibF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 314

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 24/304 (7%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPI 69
           +L     G  + IGNFDG+HLGH  IL+   + AN    P+ V+ F P PR    S+   
Sbjct: 9   NLRRDFAGCALTIGNFDGVHLGHQAILQHLREKANQLKLPMVVMLFEPQPREYFVSADA- 67

Query: 70  FTLSPPS----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                P+    +++K+  L++ G   +I  KF    A      FI+  LV  L VK +  
Sbjct: 68  -KQQAPARLMRLRDKLHYLQQQGVDYVICVKFDRTFAKQDPNLFIETYLVNRLHVKFLSI 126

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           G  FRFG +R GD  +L+  G+KYGF      T  +D+LR      +SS+ IR AL    
Sbjct: 127 GDDFRFGANRRGDFSLLESAGKKYGFSVEDNRTFSLDKLR------ISSTAIRHALAHDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  ++I   V+HG+K+GRT+GFPTAN++L   +   +GVYA+R +     ++
Sbjct: 181 LKKAEELLGRAYSIFGKVVHGQKLGRTIGFPTANIRLQRQVNPLQGVYAVRIQCPCGRAF 240

Query: 239 SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVAN G+ PT+  NG    LE  +FDF + +YGQ   V+F   +R E+KF  +  LK  
Sbjct: 241 QGVANIGQRPTV--NGVEQRLEVHLFDFDENLYGQNIAVTFCHKIRNEMKFPSLNALKQQ 298

Query: 298 MGED 301
           +  D
Sbjct: 299 IARD 302


>gi|227872008|ref|ZP_03990393.1| tRNA pseudouridine 55 synthase [Oribacterium sinus F0268]
 gi|227842151|gb|EEJ52396.1| tRNA pseudouridine 55 synthase [Oribacterium sinus F0268]
          Length = 531

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 17/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++  G FDG+HLGH  I E+  K   A N   +VLSF  HP  +         L      
Sbjct: 233 ILTFGKFDGLHLGHQKIFEELFKEGKAENLVPSVLSFTTHPSALFSGERQDL-LCTEDEH 291

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              L+  GFS +  +  TLETA  S E+F++ +LV+ L+VK ++ GT   FG    GD  
Sbjct: 292 FTRLQNAGFSQIFLFPLTLETAKMSPEKFLENILVKALKVKHLVVGTDCSFGYKGKGDVA 351

Query: 139 ILQKRGEKYGFHTVFIDEL----RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           +LQ++ E +G+    +++        KS  +SS+ IR  L +G V   A LLG  +T+  
Sbjct: 352 LLQEKAEDFGYKLTVVEKALTQDATGKSVEISSTYIRKCLEEGAVEETARLLGRYYTLSG 411

Query: 195 DVIHGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+HG+KIGR++ FPTAN+     +L P     EGVY  R     +  Y G+ + G+NP+
Sbjct: 412 TVVHGKKIGRSINFPTANILPKEGKLCP----MEGVYHTRVLL-GKDYYEGMTSIGKNPS 466

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           +  N PL +E+ I  F  +IYG++  + F  ++R +  FKDIE+LK  + +D
Sbjct: 467 VAENNPLTIETHILGFQGDIYGEKLRLEFISFIREQRHFKDIEELKSQLEKD 518


>gi|152999654|ref|YP_001365335.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS185]
 gi|217974392|ref|YP_002359143.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS223]
 gi|151364272|gb|ABS07272.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS185]
 gi|217499527|gb|ACK47720.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS223]
          Length = 311

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 169/312 (54%), Gaps = 22/312 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI     L +H  G V+ IGNFDG+H GH  ++   ++ A   + P T+++F P P+ +
Sbjct: 8   HNI-----LSSH-HGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQPQEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L VK ++
Sbjct: 62  FSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGVKYLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FG+ R G+  +L + G +YGF  V      +  LR      VSS+ +R  L KG
Sbjct: 122 VGDDFCFGQGRKGNFEMLVQAGIQYGFTVVSTQSFMLGSLR------VSSTAVREQLAKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           ++  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   
Sbjct: 176 NLEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDI 235

Query: 238 YSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GVAN G  PT+  NG +  LE  +FDF  +IYG+   V     LR E  F  ++ LK 
Sbjct: 236 YEGVANIGFRPTV--NGQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQ 293

Query: 297 YMGEDEKKARKI 308
            +  D  +AR +
Sbjct: 294 QILNDANEARAL 305


>gi|114564055|ref|YP_751569.1| riboflavin biosynthesis protein RibF [Shewanella frigidimarina
           NCIMB 400]
 gi|114335348|gb|ABI72730.1| riboflavin kinase / FMN adenylyltransferase [Shewanella
           frigidimarina NCIMB 400]
          Length = 311

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 169/307 (55%), Gaps = 7/307 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSS 66
           I+  LP+H  G V+ IGNFDG+H GH  ++   +  A++   P  +++F P P+   + +
Sbjct: 7   IHNILPSH-HGCVLTIGNFDGVHRGHAQVISSLVSKAHHFQLPAMLMTFEPQPQERFRGT 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                LS    + ++L+++    L+   FT   AN  AE FI+++LV+ L VK ++ G  
Sbjct: 66  DAPARLSLLRDKIRLLDELKIDQLLCINFTEAFANQPAEAFIEELLVKKLGVKYLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FGK R G+  +L   G+++GF TV   +     S  VSS+ +R  L  GH+  A  LL
Sbjct: 126 FCFGKGRLGNFDMLVAAGKEFGF-TVVSTQSFVVGSLRVSSTAVREQLALGHLEQARRLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ F +   V HG+K+GRT+GFPTAN+ L   ++   GV+A+R        Y GVAN G 
Sbjct: 185 GHPFILSGKVAHGQKLGRTIGFPTANIALKRHVVPVRGVFAVRLYWDGSDIYDGVANVGF 244

Query: 247 NPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG    LE  +FDFS ++YG+R  V     +R E  F+ ++ LK  +  D  +A
Sbjct: 245 RPTV--NGQTCRLEVHLFDFSGDLYGKRVEVELVAKIRDEQPFESLDALKKQILNDANEA 302

Query: 306 RKILESS 312
           R +  + 
Sbjct: 303 RALFSND 309


>gi|238916830|ref|YP_002930347.1| riboflavin kinase [Eubacterium eligens ATCC 27750]
 gi|238872190|gb|ACR71900.1| riboflavin kinase [Eubacterium eligens ATCC 27750]
          Length = 308

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 160/295 (54%), Gaps = 6/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   V +G FDGIH GH  ++E   + A+  N    + +F+  P +I       F +S  
Sbjct: 14  KESAVTLGKFDGIHTGHQKLIEIVRQKADEENLLAVLFTFDSLPLSICPQKYQHF-ISTS 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S + ++ E  G    I Y FT E  N   E FI ++L++ L  K V+ GT +RFGKDRAG
Sbjct: 73  SERRRLCENFGIDVEIEYPFTEEFMNMEPEDFICRILIDKLHAKYVVVGTDYRFGKDRAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L + GE+ GF T+ +++ +    +I SS+ IR  L  GH+     LL   F +   
Sbjct: 133 DAAMLVEAGEELGFTTIIVEKEKYQDKEI-SSTYIREELKVGHMETVNVLLNRPFNVTGV 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V  G ++GR L FPT N+  +   LL   GVYA +  T D   + GV N G  PT+    
Sbjct: 192 VSIGNQLGRKLDFPTINIYPTEYKLLPPNGVYATQ-TTIDGEKFYGVTNLGTKPTVSDAP 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + +E+F+FDF +++YG++  V F  ++RPE+KF+D+E LK  +  D   AR + 
Sbjct: 251 EISVETFLFDFDKDVYGKKVDVEFIHFIRPEMKFEDVEGLKRQIAADSDFARNMF 305


>gi|192359046|ref|YP_001983672.1| riboflavin biosynthesis protein RibF [Cellvibrio japonicus Ueda107]
 gi|190685211|gb|ACE82889.1| riboflavin biosynthesis protein RibF [Cellvibrio japonicus Ueda107]
          Length = 344

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 162/310 (52%), Gaps = 9/310 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
            HN+      P H +G V  IG+FDG+HLGH  IL+Q +  AN+   P  V+ F P P  
Sbjct: 37  LHNLR-----PWH-RGCVATIGSFDGVHLGHQAILKQLLDAANSHQLPAVVILFEPQPHE 90

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     L     + + L   G   ++   F     + SAE F++++LV+ L ++ +
Sbjct: 91  FFAGDKAPARLMRLREKVQALRAAGVQRVLCLHFNQHLRSLSAEAFVEQILVQGLGIRHL 150

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG DR GD  +LQ  G++YGF       L+ +  +  SS+ IR  L +G   +
Sbjct: 151 VVGDDFRFGCDRRGDFALLQTLGDEYGFAVTDTCTLQIDGER-ASSTRIRQLLEQGDFAH 209

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG  + I   V++G+++GR LG PTAN+QL       +GV+A+  R  D + + GV
Sbjct: 210 AQKLLGKPYEISGRVVYGKQLGRQLGVPTANVQLRRYRSPLQGVFAVLVRFADGSLHQGV 269

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  PT+  +   LLE  +FDFS+ +YG    V F   LR E KF  ++ L+  +  D
Sbjct: 270 ANVGLRPTVSGDRKPLLEVHLFDFSRMVYGAVIQVRFLYKLRDEQKFASLDALRAQLQND 329

Query: 302 EKKARKILES 311
             +A+   +S
Sbjct: 330 IAQAKTYFQS 339


>gi|322513919|ref|ZP_08066996.1| riboflavin biosynthesis protein RibF [Actinobacillus ureae ATCC
           25976]
 gi|322120254|gb|EFX92207.1| riboflavin biosynthesis protein RibF [Actinobacillus ureae ATCC
           25976]
          Length = 320

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 173/312 (55%), Gaps = 17/312 (5%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRT 61
           FHN+    +L    KG V+ IGNFDG+H+GH  IL +     +  N P  V+ F P PR 
Sbjct: 7   FHNLANFHALQ---KGCVLTIGNFDGVHIGHQNILARLCDKSLELNLPSVVMLFEPQPRE 63

Query: 62  IIQSSSPIFTLS--PPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
                S   T S  P  +       K LE+ G   ++  +F+ + A  SA+ FI ++LV+
Sbjct: 64  FFAKKSANLTASSAPARLMRLRDKLKYLEEAGIDFVLCVRFSDKFAQLSADAFISELLVK 123

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+V+ +  G  FRFG+ RAG+  +L   G KY F  V      +   + +SSS IR AL
Sbjct: 124 RLQVRYLSIGDDFRFGEKRAGNFEMLHNAGLKYRF-AVEESHTHSFNCERISSSLIRQAL 182

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            + ++     LLG  ++I   V HG K+GRT+GFPTAN+ L+  ++  +GV+A++ +T+ 
Sbjct: 183 QQDNLHLVEKLLGRPYSIAGRVAHGNKLGRTIGFPTANIMLNRLVIPLQGVFAVQIQTKT 242

Query: 235 QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              Y+G+AN G  PT+  NG   LLE  IFDF++ IYG+   V F   +R E+KF   E 
Sbjct: 243 -GKYNGIANVGNRPTI--NGSKALLEVHIFDFNRSIYGEAIEVFFMHKIRNEVKFPSFEA 299

Query: 294 LKIYMGEDEKKA 305
           LK  + +D ++A
Sbjct: 300 LKAQIEKDRQQA 311


>gi|134094086|ref|YP_001099161.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Herminiimonas arsenicoxydans]
 gi|133737989|emb|CAL61034.1| bifunctional riboflavin biosynthesis protein RibF [Includes:
           Riboflavin kinase (Flavokinase); FMN adenylyltransferase
           (FAD pyrophosphorylase) (FAD synthetase)] [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 181/325 (55%), Gaps = 14/325 (4%)

Query: 7   IEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           +++ + LPN        +AIGNFDG+H GH  +L +  ++A+   +   V++F PHPR  
Sbjct: 1   MKVFRGLPNAASRAPCALAIGNFDGVHRGHQALLARLREVASKMGLESAVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSP---PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
             + +   + +P    S+++K+  L   G   +I   F    A+ S ++F++K+LV+ L 
Sbjct: 61  FAARAGDPSKAPTRIASLRDKLQSLATAGVDRVIVEHFNEHFASLSPQEFVEKILVQGLH 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK +I G  F +G  RAG+   L + G++YGFH      + ++ ++I SSS IR AL +G
Sbjct: 121 VKWLIVGEDFCYGAKRAGNVASLIEAGKQYGFHVESQATVTSSGARI-SSSAIRKALAQG 179

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               A  LLG+ + +   VIHG+K+GRT+GFPT N+++        G+Y ++       +
Sbjct: 180 DFAEAEVLLGHPYAMSGHVIHGKKLGRTIGFPTLNLRVGHKHPALSGIYIVQVHGLADDA 239

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE+ +FD+SQ+ YG+   V F   LR E K+ D+  L   
Sbjct: 240 LPGVASIGIRPTVDDSGRVLLETHLFDYSQQCYGKLIRVEFLKKLRDEEKYIDLPTLTQA 299

Query: 298 MGEDEKKAR----KILESSYPLSER 318
           +  D  +AR    +I +S+   ++R
Sbjct: 300 IERDAVQARTYFKQIADSATSATDR 324


>gi|260771784|ref|ZP_05880702.1| riboflavin kinase/FMN adenylyltransferase [Vibrio metschnikovii CIP
           69.14]
 gi|260613076|gb|EEX38277.1| riboflavin kinase/FMN adenylyltransferase [Vibrio metschnikovii CIP
           69.14]
          Length = 348

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 162/312 (51%), Gaps = 12/312 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+     P+H  G V+ IGNFDG+HLGH  +L Q  + A   N P  V++F P P  +
Sbjct: 34  HNIK-----PHH-HGCVLTIGNFDGVHLGHQQVLSQVSQRAKQLNLPSVVMTFEPQPMEL 87

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
             +S     L+    +   L K+G   L+   F    AN  A+ FI+ +LV  L VK ++
Sbjct: 88  FLTSKAPARLTRLRDKFVQLGKLGIDRLLCVNFNHRFANLEAQAFIRDLLVGQLGVKFLV 147

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG+ R GD  +L++ GE+YGF  V        +S+ VSS+ IR AL    +  A
Sbjct: 148 VGDDFCFGQGRKGDFAMLRQAGEQYGFEVVSTQSFCVQQSR-VSSTLIREALASDQLATA 206

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +           GVA
Sbjct: 207 DTMLGRAYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEVYGLSTLPLGGVA 266

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G+ PT+  NG    LE  +FDF   +YG++  V+    LR E KF   + LK  +  D
Sbjct: 267 NIGQRPTV--NGVRQQLEVHLFDFQGNLYGKQLEVALLHKLRDEQKFASFDALKQQIELD 324

Query: 302 EKKARKILESSY 313
            + AR  L+  Y
Sbjct: 325 AEAARVWLQQLY 336


>gi|315126083|ref|YP_004068086.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315014597|gb|ADT67935.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 308

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 162/306 (52%), Gaps = 13/306 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           HNI      P H  G V+ IGNFDG+HLGH  +L+  +  A  NN P TV+ F P P+  
Sbjct: 8   HNIR-----PQHF-GCVLTIGNFDGVHLGHAAVLKGLLADAKENNLPSTVMLFEPQPQEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              ++    L+    + ++L  +G   +I   F    AN  AEQF+  +L++ L VK + 
Sbjct: 62  FAKNNAPARLTRLRDKLRLLSNLGIERVICISFNQAFANMHAEQFVSDILIKKLGVKALT 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFGK R G+  +L   G + G         R   ++ VSS+ IR AL +G +++A
Sbjct: 122 VGDDFRFGKQRQGNFSLLATMGTQAGMSVKSTASFRQLNAR-VSSTLIREALAEGDLVSA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  + GVA
Sbjct: 181 KVMLGHNYAISGRVIHGWKKGRELGFRTANIALKRQVCPVNGVFAVQVMIAGKQVF-GVA 239

Query: 243 NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT   NG   LLE  +FDF+Q+IYGQ   V   + LR E KF+ + +L   +  D
Sbjct: 240 NIGNKPTF--NGTRALLEVHLFDFAQDIYGQFMHVELIEKLRNEKKFETLTQLTAQIATD 297

Query: 302 EKKARK 307
              A++
Sbjct: 298 VAAAKQ 303


>gi|217970196|ref|YP_002355430.1| riboflavin biosynthesis protein RibF [Thauera sp. MZ1T]
 gi|217507523|gb|ACK54534.1| riboflavin biosynthesis protein RibF [Thauera sp. MZ1T]
          Length = 312

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 157/311 (50%), Gaps = 8/311 (2%)

Query: 7   IEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
           +++++ +P       V+ IGNFDG+HLGH  +L      A     P  VL+F PHPR   
Sbjct: 1   MQVHRGIPEQADTAAVLTIGNFDGVHLGHQALLSLLTDKARALGLPAVVLTFEPHPREYF 60

Query: 64  QSSSPIFTLSPPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +     L+  S++EK+L     G       +F    A   A+ FI  +LV  L V+ +
Sbjct: 61  SPADAPARLA--SLREKLLLLSAAGVDRCHVCRFDARFAAQPAQAFIDDILVRGLGVRHL 118

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  FRFG  R G+  +L+  G + GF    +  L     + VSSS +R AL +G + +
Sbjct: 119 FIGDDFRFGARRQGNFAMLRAAGAEGGFGVESMPTL-AVAGERVSSSAVRAALAEGDLAH 177

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLG  ++I   V HG+K+GR LGFPTAN+Q+        GVY +          +GV
Sbjct: 178 AARLLGRPYSIAGRVSHGDKLGRQLGFPTANIQMKHRRPALGGVYVVSVEGLASGPVAGV 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  PT   NG   LE  +FD++Q+ YG    V F   LR E KF  ++ L+  +  D
Sbjct: 238 ANIGLRPTATANGRARLEVHLFDWTQDCYGAHIRVHFLHRLRAEQKFPSLDALRAQIALD 297

Query: 302 EKKARKILESS 312
            + AR  L ++
Sbjct: 298 SQTARDWLAAN 308


>gi|313674895|ref|YP_004052891.1| riboflavin biosynthesis protein ribf [Marivirga tractuosa DSM 4126]
 gi|312941593|gb|ADR20783.1| riboflavin biosynthesis protein RibF [Marivirga tractuosa DSM 4126]
          Length = 316

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 169/298 (56%), Gaps = 8/298 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII-QSSSPIFTLS 73
           +K  VV IG FDGIHLGH  I+ + I++A +      +++F PHPR ++  +   +  L+
Sbjct: 13  IKNAVVTIGTFDGIHLGHQEIISRIIELAKSVEGETALVTFWPHPRYVLGNNQDDLKLLT 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  IL+++G   ++R  FT E + +++EQFIQ++++  L  K ++ G   RFGKDR
Sbjct: 73  TFDEKAAILDQLGLDHIVRVHFTKEFSQWTSEQFIQRIIISALHTKRLVIGYDHRFGKDR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    L+K   +YGF    I +   +   I SS+ IR A+  G V  A   LG  + I 
Sbjct: 133 EGGFEHLKKHSNRYGFEVEEIPKQTIDDVGI-SSTKIRNAIEDGKVELAHDFLGRYYEIN 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
            +++ G+KIG+TLGF TAN+Q+     ++  +GVYA+    + Q  Y  + N G  PT V
Sbjct: 192 GEIVGGDKIGKTLGFATANIQVEEPYKLVPADGVYAVTAELKGQ-QYKAMLNIGYRPT-V 249

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 +E+ IFDF+ +IYG++  ++F   LR EIKF     L   + +D++KA +IL
Sbjct: 250 DGKTKKIEANIFDFNDDIYGEKIKINFIKRLREEIKFDSKAALSKQLQKDKEKAIQIL 307


>gi|312114351|ref|YP_004011947.1| riboflavin biosynthesis protein RibF [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219480|gb|ADP70848.1| riboflavin biosynthesis protein RibF [Rhodomicrobium vannielii ATCC
           17100]
          Length = 321

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 161/315 (51%), Gaps = 16/315 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V H       +P+  KG  +AIG FDG+H GH  +L  A + A +   P+  + F P+
Sbjct: 1   MDVVHGW---HEVPDSAKGASLAIGTFDGVHRGHRAVLHAAQEKAQDGRLPMGAMVFEPY 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI----LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PR   Q    +F L+  ++Q K+        GF+A+I   F  + A   A+ F++++LV+
Sbjct: 58  PRKFFQPQKTLFRLT--TLQRKLDLLAAYGCGFTAVI--PFDADLAGLPADAFVEQILVD 113

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +K    G  F FGK R+G+  +L   G ++GF    +   +     + SS+ IR  L
Sbjct: 114 AFAIKHASVGYNFFFGKGRSGNPDVLAALGRQHGFGVTVV-SAQGYAGDVFSSTRIRELL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G V  AA +LG  + I   V  G   G+ LG+PTAN++L   + LK G+YA+     D
Sbjct: 173 AEGDVAAAAEMLGSWWRIAGPVEGGAGRGKVLGYPTANIRLEDGVSLKHGIYAVNAYV-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                G +  G  PT     P LLE+F+FDF  ++YG+   + F  Y+R + KFK  E L
Sbjct: 232 GRKVQGASYLGTRPTFDAGQP-LLETFLFDFDGDLYGKTIEIEFIAYIRDDAKFKSAEAL 290

Query: 295 KIYMGEDEKKARKIL 309
              M  D  KA++IL
Sbjct: 291 AQQMATDVAKAKEIL 305


>gi|325954507|ref|YP_004238167.1| riboflavin biosynthesis protein RibF [Weeksella virosa DSM 16922]
 gi|323437125|gb|ADX67589.1| riboflavin biosynthesis protein RibF [Weeksella virosa DSM 16922]
          Length = 308

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 174/308 (56%), Gaps = 9/308 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF +IE  Q++ N     V+ +G +DG+H GH  I++Q   IA   N    ++SF+PH
Sbjct: 1   MKVFSSIEACQNIQN----PVLTLGMYDGVHKGHQKIIQQLNTIAKEVNGESVLMSFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q    +  +S  S +++IL +      +   FT E +  SA  F+   L+  + V
Sbjct: 57  PRLVLQPDFDLELISTLSEKKEILAQNDLHNFVIQSFTREFSQVSARDFVVDYLIGKINV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G    FGK+R G+   L +  ++YGF+ V I+E+   ++ I SS+ IR AL  G 
Sbjct: 117 HTLVIGYDHHFGKNREGNFEQLTELSKEYGFNVVRINEICEGETPI-SSTKIRKALKTGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS 237
           +  A + LGY FT+  +VIHG+K+GRTLGFPTAN++L    L+ K GVY +  + + +  
Sbjct: 176 IEYANNALGYNFTLTGEVIHGDKLGRTLGFPTANLKLPAYKLVPKTGVYVVHVQIEGKL- 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + G+ + G   T+  N  L +E  I DF  ++YG+  +V    ++R E KF  +E+L   
Sbjct: 235 HLGLLSIGYRETVTDNSELRVEVNILDFEGDLYGKILSVEIMGFIRNEKKFNSLEELTEA 294

Query: 298 MGEDEKKA 305
           M  D++ A
Sbjct: 295 MNHDKEYA 302


>gi|332799228|ref|YP_004460727.1| riboflavin biosynthesis protein RibF [Tepidanaerobacter sp. Re1]
 gi|332696963|gb|AEE91420.1| riboflavin biosynthesis protein RibF [Tepidanaerobacter sp. Re1]
          Length = 308

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 165/294 (56%), Gaps = 8/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IGNFDGIH GH  ++++ ++ +   N    + +F PHP  ++ S + +  +  P+ +
Sbjct: 17  ACGIGNFDGIHKGHQKLIKELLRSSQLRNIDSLIFTFEPHPSKVLSSDNNVKFIMTPNQK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++I++  G    I   FTLE +  + + FI  +L+     K ++ G  +RFG    G   
Sbjct: 77  QQIMKSYGIDHFILAPFTLEFSRINYKDFIYDILINKCNAKVIVVGYNYRFGYKSEGTAH 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++   K G  T+ I  ++  K QI+SS+ IR  + KG + +AA  LG  FT+E  V H
Sbjct: 137 TLKEICHKEGIDTIIIPPVKY-KGQIISSTFIRNLIEKGDMKSAAEFLGRPFTVEGFVQH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PL 256
           G  IG+ LGFPTAN+    +++L   GVYA+  R +D   Y GVAN G  PT   NG  +
Sbjct: 196 GNGIGKKLGFPTANILPEQELILPPRGVYAVLVRWKDNI-YKGVANLGIKPTF--NGDSI 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            LE+ +F+FS+++YG++  V F D LR EIKF   E L + +  D  +A +IL+
Sbjct: 253 WLETHLFNFSKKLYGEKLEVMFIDNLRREIKFNTAEALAMQIQNDFIRAMEILK 306


>gi|113460334|ref|YP_718395.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           somnus 129PT]
 gi|170718711|ref|YP_001783411.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           somnus 2336]
 gi|112822377|gb|ABI24466.1| FMN adenylyltransferase [Haemophilus somnus 129PT]
 gi|168826840|gb|ACA32211.1| riboflavin biosynthesis protein RibF [Haemophilus somnus 2336]
          Length = 314

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 165/313 (52%), Gaps = 14/313 (4%)

Query: 4   FHNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
           FHN      LP  LK  G  V IGNFDG+HLGH  IL+     A   N P+ V+ F P P
Sbjct: 7   FHN------LPEPLKQQGCAVTIGNFDGVHLGHQSILQHLKAKAKQLNLPVVVMLFEPQP 60

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
               Q       L     +   L ++G   +   KF    A  SAEQFI   LV+ L++K
Sbjct: 61  YEYFQGDQAPARLMRLRDKLAYLAQLGVDYVFCVKFNRTFAQLSAEQFISDCLVKHLKMK 120

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG +R GD  +LQK+G++  F       L+ N  Q +SS+ IR AL++ ++
Sbjct: 121 FLSIGDDFRFGLNREGDFRLLQKKGQQQSFIVEDNRSLQLN-DQRISSTAIRQALSEDNL 179

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  + I   V HG K+GRT+GFPTAN+ L   +   +GVY ++ R ++   + 
Sbjct: 180 ALAEKLLGKPYRIYGRVAHGNKLGRTIGFPTANIYLHRQVNPIKGVYVVKVRLKNGDIFQ 239

Query: 240 GVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GVAN G+ PT+  NG   LLE  +F+F +++YGQ   + F   +R E KF  +  LK  +
Sbjct: 240 GVANIGKRPTI--NGVKQLLEVHLFNFDRDLYGQSLQIEFCHKIRHEKKFPSLNALKNQI 297

Query: 299 GEDEKKARKILES 311
             D   A+K  + 
Sbjct: 298 ENDVVVAKKYFQQ 310


>gi|332668406|ref|YP_004451194.1| riboflavin biosynthesis protein RibF [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332337220|gb|AEE54321.1| riboflavin biosynthesis protein RibF [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 664

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 12/305 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII---QSS 66
            LP+  K  VV IG+FDG+H GH  I+EQ  +IA        V++F+PHPR+I+    +S
Sbjct: 9   DLPD-FKNAVVTIGSFDGVHQGHQSIIEQVRQIALRYGGESVVITFHPHPRSIVFPKDTS 67

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             + T +   I+  + E+     L+   FT+E +  SA+++I+K LVE    K ++ G  
Sbjct: 68  LRLITTTEEKIE--LFERYHIDHLVIVPFTVEFSQMSADEYIEKFLVEKFHPKCIVIGYD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            RFG  R GD   L+   E++G+  V I E R      VSS+ IR AL    V  AA L+
Sbjct: 126 HRFGLSRQGDIHYLRWHCERFGYEVVEI-EPRQVDDMTVSSTKIRRALENCEVKAAAQLM 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANF 244
           G+ F +   V+ G++IGRTLGFPTAN++L+    L   +G+YA++     Q  Y G+   
Sbjct: 185 GHYFPLSGVVVKGQQIGRTLGFPTANIELNERFKLIPPDGIYAVKVSINAQ-QYRGMLYM 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+       +E  IFDF+Q+IY Q+ T+   D++R + K+  +  L   + +D+  
Sbjct: 244 GTRPTLKQYHNRTIEVNIFDFNQDIYEQKITLELVDFIRHDQKYAQLSDLAKQLEQDKIA 303

Query: 305 ARKIL 309
             K+L
Sbjct: 304 VEKVL 308


>gi|224476400|ref|YP_002634006.1| putative riboflavin kinase / FAD synthase RibC [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421007|emb|CAL27821.1| putative riboflavin kinase / FAD synthase RibC [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 324

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/299 (37%), Positives = 170/299 (56%), Gaps = 11/299 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP-IFTLSPPSIQ 78
           +A+G FDG+H GH  +     +IA   N    V++F+PHP  ++         L+P S +
Sbjct: 22  MALGFFDGLHKGHAQVFHALNEIAEKKNLKKAVMTFDPHPSVVLNPKQKRTDYLTPLSDK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +ILE      +I   FT + A+ S E+F+++ LVE   VK VI G  F FGK   G+  
Sbjct: 82  IEILEAYDIDYVIIVNFTSKFADCSIEEFVEQYLVEN-HVKEVIAGFDFTFGKHGKGNMS 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++  E +    V   E+ + K   +S++ IR AL +G++  A   LGYR+ I+  V+ 
Sbjct: 141 VLKELKEHFNTTVVSKQEMYSEK---ISTTEIRRALKEGNLKKANEELGYRYRIKGTVVQ 197

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTM--VPNG 254
           GEK GRT+GFPTAN++ S D +L K+GVYA+      +Q  Y GV N G  PT       
Sbjct: 198 GEKRGRTIGFPTANIEPSDDYVLPKKGVYAVSLAIGAEQRIYRGVCNVGVKPTFHDPKKS 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +++E  IFDF ++IYG+R  V +  YLRPEIKF  I+ L   M +D+++A+ +L   +
Sbjct: 258 HVVIEVNIFDFDEDIYGERVVVFWHHYLRPEIKFDGIDPLVEQMNKDKEQAKYLLSVDF 316


>gi|91794075|ref|YP_563726.1| riboflavin biosynthesis protein RibF [Shewanella denitrificans
           OS217]
 gi|91716077|gb|ABE56003.1| FMN adenylyltransferase / riboflavin kinase [Shewanella
           denitrificans OS217]
          Length = 311

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 167/302 (55%), Gaps = 5/302 (1%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSS 66
           I+  LP+H  G V+ IGNFDG+H GH  ++   +  A++   P T+++F P P      +
Sbjct: 7   IHNILPSH-HGCVLTIGNFDGVHRGHGQVIGNLVSKAHHFQLPATLMTFEPQPMERFLGA 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    LS    + ++L+++    L+   FT   A+ +AE FI+ +LV+ L VK ++ G  
Sbjct: 66  NAPARLSLLRDKVRLLDELEVDRLLCVNFTHAFASQTAETFIEDLLVKKLGVKYLVVGDD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FGK R G+  +L   G+K+GF TV   +     S  VSS+ +R  L  G++  A  LL
Sbjct: 126 FCFGKGRLGNFDMLLNAGKKHGF-TVVSTQSFMLGSHRVSSTAVREQLAAGNLEQARRLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ F +   V HG+KIGRT+GFPTAN+ +  +++   GV+A+R   Q   SY GVAN G 
Sbjct: 185 GHPFILSGRVAHGKKIGRTIGFPTANIAMKRNVVPVRGVFAVRINWQGSDSYEGVANVGF 244

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT V      LE  +FDF  ++YG+   V     +R E  F+ ++ LK  +  D  +AR
Sbjct: 245 RPT-VQGQTCQLEVHLFDFDGDLYGKHVEVELVAKIREEQPFESLDALKQQILNDANQAR 303

Query: 307 KI 308
            +
Sbjct: 304 AL 305


>gi|58581248|ref|YP_200264.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58425842|gb|AAW74879.1| riboflavin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 398

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 167/319 (52%), Gaps = 22/319 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P    G VV IG FDG+HLGH  +++ A+  A   + P   +SF P PR
Sbjct: 64  LFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLPR 120

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +  SAE F+   LV
Sbjct: 121 EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMSAEDFVHLALV 173

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R GD G+L   GE++GF    I  +  +  +I S++ IR  
Sbjct: 174 GRLCAREVWIGPEFRFGHRRGGDIGLLHTLGEQHGFVAGEIAPVHLHGERI-SATRIREL 232

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA      
Sbjct: 233 LVAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGV 291

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +T +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 292 AETPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEA 350

Query: 294 LKIYMGEDEKKARKILESS 312
           L + M  D ++AR +L +S
Sbjct: 351 LTVQMHRDAEQARAVLAAS 369


>gi|291280325|ref|YP_003497160.1| riboflavin biosynthesis regulatory protein RibF [Deferribacter
           desulfuricans SSM1]
 gi|290755027|dbj|BAI81404.1| riboflavin biosynthesis regulatory protein RibF [Deferribacter
           desulfuricans SSM1]
          Length = 305

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+HLGH  I+++ + +A   N    V++F+PHP         +       I 
Sbjct: 17  IITIGNFDGVHLGHQTIIKKVLSLAKEFNLKSGVVTFSPHPIKFFNKDIKLIMTERKKI- 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KI E +G        F    AN   E FI++ LV+ L+   ++ G  +RFG+ R GD  
Sbjct: 76  -KIFESLGIDYFFNLTFNESIANMDPEIFIREFLVKSLKASFIVVGYDYRFGRKRKGDYE 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+    KYG+    I  ++ +   IVSS+NIR+ L+KG V  A  +LG  FT+E  V+ 
Sbjct: 135 LLKMLETKYGYTAFKIPPVKID-DIIVSSTNIRSLLSKGDVELANKMLGRPFTLEGVVVK 193

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+  GR LG+PTAN+ +  +++   G+YA +    ++  Y  V N G  PT+V    + +
Sbjct: 194 GDGYGRLLGYPTANLSVKNELIPANGIYATKTIINNK-KYLSVTNIGIRPTLVNKNEVRV 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E+ IFDF ++IY     V F  Y+R E KF+D+  L   + +D +KA++IL
Sbjct: 253 ETHIFDFDEDIYDNFIEVEFHSYIREEKKFEDVNSLIKQIQKDCEKAKEIL 303


>gi|270159964|ref|ZP_06188620.1| riboflavin biosynthesis protein RibF [Legionella longbeachae
           D-4968]
 gi|289165292|ref|YP_003455430.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella longbeachae NSW150]
 gi|269988303|gb|EEZ94558.1| riboflavin biosynthesis protein RibF [Legionella longbeachae
           D-4968]
 gi|288858465|emb|CBJ12343.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella longbeachae NSW150]
          Length = 322

 Score =  175 bits (443), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  ++      AN+   P+ ++ F P PR   Q       LS  
Sbjct: 15  KGVVATIGNFDGVHLGHQSLIRTLRAKANHLKLPLVLILFEPQPREFFQKEKAPARLS-- 72

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           S++EK+  L       +  +KF  + A  SAE F +  L   L VK ++ G  FRFGK+R
Sbjct: 73  SLREKLEALRCCQVDYIYCFKFNNDLAQTSAEDFARDYLFSMLNVKHLLVGEDFRFGKNR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +L++  ++Y            N+ +I SS+ IR+AL KG +  AA  LG  + I 
Sbjct: 133 EGDISLLKELSQEYACDVSIYSNFCINEDRI-SSTRIRSALQKGDLNTAAKYLGRIYNIC 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             ++HG+  GR  G PTAN+ L+   L  +GV+ ++ R   +T Y GVAN GR PT V  
Sbjct: 192 GRILHGDGRGRQWGIPTANLALNRYSLPLQGVFVVQVRIASKTVY-GVANVGRRPT-VDG 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +LE  +FDF Q IYG+   V F   LR E+KF  ++ L   + ED K A+  L +
Sbjct: 250 SKNILEVHLFDFDQSIYGELMQVFFLHKLRDEVKFNSVDALLAQINEDIKAAKAYLRT 307


>gi|328953955|ref|YP_004371289.1| riboflavin biosynthesis protein RibF [Desulfobacca acetoxidans DSM
           11109]
 gi|328454279|gb|AEB10108.1| riboflavin biosynthesis protein RibF [Desulfobacca acetoxidans DSM
           11109]
          Length = 324

 Score =  175 bits (443), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 14/305 (4%)

Query: 21  VVAIGNFDGIHLGHH----LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           V+ IGNFDG+HLGH     L+ E+A  +  +S   V++F+PHP  ++Q    +  L+   
Sbjct: 18  VITIGNFDGVHLGHQTLFGLVRERAAAVNGHS--VVITFDPHPIKLMQPGRQLPLLTTTD 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++L ++    +I + FT E     A +FIQ  L+E L V+ ++ G  +RFG +R G+
Sbjct: 76  QKIRLLGELNLDIVIVHPFTKEFGAMPAREFIQHYLLERLGVQEIVIGHDYRFGHNREGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ  G  +GF    +D ++ ++  IVSS+ IR  +  G V  A   LG  + +  +V
Sbjct: 136 IALLQTLGAAWGFPVHVVDAIQVDEI-IVSSTLIRNLIRDGKVAAARTFLGRSYEVTGEV 194

Query: 197 IHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHG   G R LGFPTAN++   ++L   G+YA+R     +T Y+ VAN G  PT   N  
Sbjct: 195 IHGHGRGARLLGFPTANIRADNELLPVAGIYAVRATLWGRT-YAAVANIGVCPTF-DNDE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           L LE  I DF+Q+IYG    V F   LR E +F +I  L   +  D + AR+I+     L
Sbjct: 253 LSLEVHILDFNQDIYGSHLAVEFVQRLRDERRFPNIPALVDQIKTDVEAARQIVR----L 308

Query: 316 SERDR 320
             RDR
Sbjct: 309 EGRDR 313


>gi|255029857|ref|ZP_05301808.1| hypothetical protein LmonL_13769 [Listeria monocytogenes LO28]
          Length = 288

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 164/282 (58%), Gaps = 8/282 (2%)

Query: 29  GIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKM 85
           G+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + K+
Sbjct: 3   GVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKL 62

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +
Sbjct: 63  GVDIMYVVRFTTQFSELSPQAFVDNYLVA-LHVEHVVAGFDYSYGKKGEGKMTDLAKYAD 121

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
             G   V I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT
Sbjct: 122 --GRFEVTIVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRT 179

Query: 206 LGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +GFPTAN++++ D L+ K GVYA++FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 IGFPTANIRVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 238

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           F +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R
Sbjct: 239 FHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTR 280


>gi|262401620|ref|ZP_06078186.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC586]
 gi|262352037|gb|EEZ01167.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC586]
          Length = 322

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 154/296 (52%), Gaps = 10/296 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F+P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFDPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    + +AA +LG  ++I 
Sbjct: 133 KGNFALLQQAGQAFGFEVVSTQSF-CLQQQRVSSTAIREALAADELTSAADMLGRNYSIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG+K+GRT+GFPTAN+ L   +    GVY +      QT   GVAN G  PT V  
Sbjct: 192 GRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPIGGVANIGNRPT-VDG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  L
Sbjct: 251 IRQQLEVHFFDFQGNLYGKQLEVALLHKLRDECKFASFEALKQQIELDAEAARVWL 306


>gi|84623168|ref|YP_450540.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|84367108|dbj|BAE68266.1| riboflavin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 338

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 167/319 (52%), Gaps = 22/319 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P    G VV IG FDG+HLGH  +++ A+  A   + P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +  SAE F+   LV
Sbjct: 61  EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMSAEDFVHLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R GD G+L   GE++GF    I  +  +  +I S++ IR  
Sbjct: 114 GRLCAREVWIGPEFRFGHRRGGDIGLLHTLGEQHGFVAGEIAPVHLHGERI-SATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA      
Sbjct: 173 LVAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +T +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AETPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILESS 312
           L + M  D ++AR +L +S
Sbjct: 291 LTVQMHRDAEQARAVLAAS 309


>gi|328675588|gb|AEB28263.1| Riboflavin kinase / FMN adenylyltransferase [Francisella cf.
           novicida 3523]
          Length = 306

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 168/296 (56%), Gaps = 12/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI-IQSSSP--IFTLSPP 75
            +AIG+FDG+HLGH  I+++ + IA  NN    +L F P P+   ++  +P  I+     
Sbjct: 17  AIAIGSFDGVHLGHQAIIKKLLTIAKKNNLVPYILFFEPLPKEFFLKDKAPLRIYDFRNK 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I    + K+G   +I  KF  + AN +A +FI++ LV+ L  K +I G  F+FGK+R G
Sbjct: 77  VIN---IHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNTKHIIIGDDFKFGKNRGG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L +  + + F    +  L N  +  +SSS+IR AL   +++ A  LLG    I S 
Sbjct: 134 DYALLNQYSQTHDFSVDKVSTL-NLDNHRISSSDIRQALITHNLIEANKLLGESLKINSR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG+K GR +GF TAN +L  +  LK GVY  R    D   + GV N G  PT +    
Sbjct: 193 VIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFI-DNAIFYGVTNAGTRPT-IDGKN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ + +D + A+K++ +
Sbjct: 250 NLLETHIFNFNQEIYGKHITTEIVSFIRSEMKFNSFEELKLQISKDIQTAKKLIST 305


>gi|258620349|ref|ZP_05715387.1| Riboflavin biosynthesis protein [Vibrio mimicus VM573]
 gi|258587228|gb|EEW11939.1| Riboflavin biosynthesis protein [Vibrio mimicus VM573]
          Length = 322

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/296 (37%), Positives = 153/296 (51%), Gaps = 10/296 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    + NAA +LG  ++I 
Sbjct: 133 KGNFALLQQAGQAFGFEVVSTQSF-CLQQQRVSSTAIREALAADELTNAADMLGRNYSIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG+K+GRT+GFPTAN+ L   +    GVY +      QT   GVAN G  PT V  
Sbjct: 192 GRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPIGGVANIGNRPT-VDG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  L
Sbjct: 251 IRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWL 306


>gi|218708569|ref|YP_002416190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           splendidus LGP32]
 gi|218321588|emb|CAV17540.1| Riboflavin biosynthesis protein ribF [Vibrio splendidus LGP32]
          Length = 311

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 154/291 (52%), Gaps = 6/291 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQEVLSQVSKQATALGLPSVVMTFEPQPMELFAKGRAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+  S L+   F    A+ SAE FI+ +LV+ L VK ++ G  F FGK R G+
Sbjct: 76  DKYVQLSKLEISRLLCVNFNQYFASLSAEAFIKDLLVDKLGVKFLVVGDDFCFGKGRTGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ GEKYGF  V       N+ + VSS+ IR AL    + ++A +LG  ++I   V
Sbjct: 136 FAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAANDLASSATMLGRDYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-P 255
            HG K+GRT+GFPTAN+ L   +    GVY +     D     GVAN G+ PT+  NG  
Sbjct: 195 SHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALDIDGVPVGGVANIGQRPTV--NGVR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             LE   FDF   +YG++  V     LR EIKF+  + LK  +  D + AR
Sbjct: 253 QQLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFESFDALKNQIELDAEAAR 303


>gi|116329029|ref|YP_798749.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116330362|ref|YP_800080.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121773|gb|ABJ79816.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124051|gb|ABJ75322.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 319

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 174/301 (57%), Gaps = 17/301 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV +GNFDGIHLGH  +L++ ++++  + +   V++++P+P  ++     +  L   + +
Sbjct: 19  VVTLGNFDGIHLGHQALLDRVLQVSQKTGLASCVVTYDPNPAVVLGKKPEMKNLMTFADK 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E+ + + G   L+   F  E A  SAE F++++L++ L+ K +I G    FGK+R G+  
Sbjct: 79  EEWIRQKGIDFLVVLSFNKELAEMSAESFLEEILLKQLKAKNIIIGFNHCFGKERRGNYE 138

Query: 139 ILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +L++  EK  +       VF+ E++      +SSS +R  +++G+V  AAH L   +++ 
Sbjct: 139 LLKEYSEKLKYSVEKMDPVFLKEIK------LSSSYVRRLISEGNVKEAAHCLNRFYSVS 192

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G K GR +GFPTAN+Q  + DILL   GVYA  F T     YS + N G NPT  
Sbjct: 193 GTVVGGHKRGRKIGFPTANVQPTNADILLPGIGVYA-GFTTVAGIEYSSMINIGHNPTFG 251

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            N  + LES IFDF + IY +   ++F + +R EI+F  +E L   + +DE  AR IL++
Sbjct: 252 ENA-ITLESNIFDFQKNIYDEGIKIAFAEKIRNEIQFSSVENLIAQLKQDEISARNILKT 310

Query: 312 S 312
           +
Sbjct: 311 T 311


>gi|90580544|ref|ZP_01236349.1| hypothetical protein VAS14_07439 [Vibrio angustum S14]
 gi|90438202|gb|EAS63388.1| hypothetical protein VAS14_07439 [Photobacterium angustum S14]
          Length = 320

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/319 (36%), Positives = 163/319 (51%), Gaps = 16/319 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           HNI+     P H  G V+ IGNFDG+HLGH  +L Q +  A+   +T  V++F P P  +
Sbjct: 8   HNIQ-----PQH-HGCVLTIGNFDGVHLGHQALLRQVVAKAHAMQLTATVMTFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L+K+G   L+   F    A  SAE F++ +LV+ L VK ++
Sbjct: 62  FAGDKAPARLTRFRDKYLQLKKVGIDRLLCVNFNHHFATMSAEDFVECLLVKQLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+ R GD  +L + G K+GF  V       ++ Q VSS+ IR AL    +  A
Sbjct: 122 IGDDFRFGQGRNGDFSMLVEAGRKHGFEVVSTQSFCVSE-QRVSSTAIRQALANNELEQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D     GVA
Sbjct: 181 EMMLGRPYSIRGRVSHGRKLGRTIGFPTANIPLKRRVTPVAGVYAVEVYGADSRPVMGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE  +FDF  ++YG +  V     LR E KF+  + LK  +  D 
Sbjct: 241 NVGHRPT-VKGVRQQLEVHLFDFHADLYGHQLEVVLRHKLRDEKKFESFDALKSQIERDA 299

Query: 303 KKARKILESSYPLSERDRI 321
           + AR        LSER+ +
Sbjct: 300 QTAR------VWLSERNNV 312


>gi|145297753|ref|YP_001140594.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850525|gb|ABO88846.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 324

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 165/307 (53%), Gaps = 17/307 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPR 60
           HNI+     P H +G V+ IGNFDG+H GHH +L    E+A+++    P  V+ F P P 
Sbjct: 8   HNIK-----PRH-RGCVLTIGNFDGVHQGHHAVLARLQEKAVQLG--LPACVMLFEPQPL 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   S+    LS    + + L+ M    ++  +F    A  S   FI+++LVE L V+ 
Sbjct: 60  ELFAGSAAPARLSRLREKYEALKGMQIDRMLCVRFNHRFAEQSPNSFIEQLLVEKLGVRY 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  FRFGK R GD  +L++ G ++GF  +     +  + Q VSS+ +R AL  G + 
Sbjct: 120 LVVGDDFRFGKGREGDFHLLEEAGHRFGFEVISTQSFQLER-QRVSSTLVREALKAGRMA 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
               +LG  +TI   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T + G
Sbjct: 179 EVEMMLGRPYTISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVLCSGKT-FPG 237

Query: 241 VANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           VAN G  PT+  NG    LE  +FDFS ++YGQ+  V     LR E KF     LK  + 
Sbjct: 238 VANVGVRPTV--NGTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFASFIALKEQIE 295

Query: 300 EDEKKAR 306
            D   AR
Sbjct: 296 RDALAAR 302


>gi|261492879|ref|ZP_05989425.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496771|ref|ZP_05993146.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307610|gb|EEY08938.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311420|gb|EEY12577.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 320

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 176/316 (55%), Gaps = 25/316 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           FHN++ + +L    +G V++IGNFDG+HLGH  IL +    A +   P  V+ F P PR 
Sbjct: 7   FHNLDKHIALN---QGCVLSIGNFDGVHLGHQNILARLCDRALDLGLPSVVMLFEPQPRE 63

Query: 62  IIQSSSPIFT-LSPPS----IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
                S   T  +PP+    +++K+  LE+ G   ++  +F+ + A  SA+ FI  +L +
Sbjct: 64  FFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCVRFSEKFAQISADDFISDLLAK 123

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSN 169
            L+V+ +  G  FRFG  RAG    L+  G KY F     HT  ++E R      +SSS 
Sbjct: 124 RLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAVEESHTHSLNEER------ISSSL 177

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           +R AL    +  A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   + V+ ++
Sbjct: 178 VREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPTANIMLNRLVTPIQEVFVVK 237

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            +T+ Q S++G+AN G  PT+    P LLE  IFDF+  IYG+   V F   LR EIKF 
Sbjct: 238 VKTK-QGSFNGIANVGNRPTINGTKP-LLEVHIFDFNASIYGEAIEVIFLKKLRNEIKFP 295

Query: 290 DIEKLKIYMGEDEKKA 305
           D E LK  + +D  +A
Sbjct: 296 DFEALKAQIEKDRLQA 311


>gi|237801849|ref|ZP_04590310.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331024707|gb|EGI04763.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 316

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFAFLQQAGTTYGFTVEAAQTVEIDGVR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AVADFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             S+ GVAN G  P++  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E L
Sbjct: 232 GKSWPGVANIGVRPSVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|254417322|ref|ZP_05031065.1| riboflavin biosynthesis protein RibF [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175860|gb|EDX70881.1| riboflavin biosynthesis protein RibF [Microcoleus chthonoplastes
           PCC 7420]
          Length = 325

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/324 (35%), Positives = 161/324 (49%), Gaps = 24/324 (7%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGH----HLILEQAIKIANNS-PI------------- 50
           +  SL   L    VA+GNFDGIH GH    H IL+ +  +   S PI             
Sbjct: 3   VTSSLATALTPTAVALGNFDGIHRGHQQVIHPILQHSSLLPGQSEPINPQERVNREGKHI 62

Query: 51  --TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
             T+ +F PHPR    S  P   L+P   +   L+++G   L+   F  E A  S EQF+
Sbjct: 63  YPTLATFYPHPREFF-SGQPWKLLTPKPEKVDQLQRLGIEQLVLLPFDRELAALSPEQFV 121

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
            K+L+E L    V  G  FRFG  R G    LQ     YG   V I  ++  + + +SSS
Sbjct: 122 DKILIEQLRATHVSIGEDFRFGYRRTGTAKDLQAIAATYGVK-VTIVTIQTCQGERISSS 180

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYA 227
            IR +L +G +L A  LLG  ++I   V+ G+++GRTLGFPTAN++  PD  L + GVY 
Sbjct: 181 LIRQSLEEGDILKANRLLGRPYSIMGQVVKGQQLGRTLGFPTANLEWFPDKFLPRNGVYC 240

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           +R          GV N G  PT V    L +E  + ++S ++YGQ  TVS   +LRPE K
Sbjct: 241 VRVSRPSFPDQWGVMNIGERPT-VKGTCLTVEIHLLNWSGDLYGQTITVSLEQFLRPEQK 299

Query: 288 FKDIEKLKIYMGEDEKKARKILES 311
           F  ++ L+  +  D        E+
Sbjct: 300 FASLDDLRTQIQADCAATTTFFET 323


>gi|256750796|ref|ZP_05491681.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750379|gb|EEU63398.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 316

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 160/278 (57%), Gaps = 6/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+    P   ++    +
Sbjct: 17  VIALGNFDGVHIGHQKLIKQAIFLSKENNLTSAVFTFKQHTSKILTPDKPPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI K+LVE L ++  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTENFSKLAAEEFIIKILVELLNIRIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +  V++      +  +VSSS IR  +  G +  A  LLG  F+++ +VIH
Sbjct: 137 TLKKYSKIYSYK-VYVVPPVIREGVVVSSSYIRELIKSGKIEKANELLGRFFSLQGEVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D++L K GVY  R +  D+  Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISGDLVLPKAGVYVTRVKIDDKF-YIAVTNVGSKPTF-GGKNIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +ES+I D+++ +Y +   V F   +R EIKFK++E LK
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFKNVEALK 291


>gi|209694171|ref|YP_002262099.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Aliivibrio
           salmonicida LFI1238]
 gi|208008122|emb|CAQ78264.1| riboflavin biosynthesis protein RibF [Aliivibrio salmonicida
           LFI1238]
          Length = 310

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 161/315 (51%), Gaps = 20/315 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI      PNH +G V+ IGNFDG+HLGH  +L+Q    A     P  V++F+P P   
Sbjct: 8   HNIT-----PNH-QGCVMTIGNFDGVHLGHQQVLQQVKGKAKQLGLPSVVMTFDPQPMEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F  + A  +A++F++ +LV+ L VK ++
Sbjct: 62  FAKEKAPARLTRLRDKFVQLNKLDIDRLLCINFNHKFAQQTADEFVEHLLVKLLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQK GEKYGF  V      N KS     Q VSS+ IR AL + 
Sbjct: 122 IGDDFCFGKHRLGNFDMLQKAGEKYGFEVV------NTKSFCIEKQRVSSTAIRNALAEN 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + + A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +      
Sbjct: 176 RLKDVAVMLGRDYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSSGKQ 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G  PT V      LE   FD+   +YGQ+  V     LR E KF+  + LK  
Sbjct: 236 LGGVANIGHRPT-VDGVRQQLEVHFFDYKGNLYGQQLDVELLCKLRDEHKFESFDALKQQ 294

Query: 298 MGEDEKKARKILESS 312
           +  D + AR  L  +
Sbjct: 295 IELDSQAARVWLSEN 309


>gi|251794003|ref|YP_003008735.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Aggregatibacter aphrophilus NJ8700]
 gi|247535402|gb|ACS98648.1| riboflavin biosynthesis protein RibF [Aggregatibacter aphrophilus
           NJ8700]
          Length = 339

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 170/336 (50%), Gaps = 43/336 (12%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +LP++L+G  + IGNFDG+HLGH  IL    + A+  N P+ V+ F P PR         
Sbjct: 9   NLPHNLQGCTLTIGNFDGVHLGHQAILRHLRQKADELNLPMAVMLFEPQPREYFLGEKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +   L++ G   +I  KF    A   AEQF++  LV  L VK +  G  F+F
Sbjct: 69  ARLMRLRDKLHYLKQAGVDIVIVAKFDRTFAGMPAEQFVEDWLVRTLNVKFLSIGDDFKF 128

Query: 130 GKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           G  R G+  +LQ+ GEK+GF      +  +DELR      +SS+ IR AL    +  A  
Sbjct: 129 GAKRQGNFAMLQQAGEKFGFTVEDNRSFCLDELR------ISSTAIREALANDDLTLAEK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS------- 237
           LLG  + I   VIHG ++GRT+GFPTAN++L   +   +GVYA+R    + +S       
Sbjct: 183 LLGRPYRILGRVIHGNQLGRTIGFPTANIRLHRQVNPVKGVYAVRVFIIEPSSIIHPSGA 242

Query: 238 --------------------YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTV 276
                               ++GVAN G  PT+  NG   LLE+ +FDF  +IYGQ   V
Sbjct: 243 VEQADVQNASRFVWLKSGAFFNGVANIGTRPTI--NGVNQLLEAHLFDFQGDIYGQWLEV 300

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
                +R E+KF   + LK  + +D + A+ I ++ 
Sbjct: 301 ELCHKIRNEMKFASFDDLKDQIAKDVETAKNIFKTD 336


>gi|51244946|ref|YP_064830.1| riboflavin kinase (FAD synthetase) [Desulfotalea psychrophila
           LSv54]
 gi|50875983|emb|CAG35823.1| related to riboflavin kinase (FAD synthetase) [Desulfotalea
           psychrophila LSv54]
          Length = 324

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 169/315 (53%), Gaps = 14/315 (4%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFN 56
           M +F +I +I Q   N      V IGNFDG+HLGH  +  + +  A          ++F+
Sbjct: 1   MQIFTDITQIKQCFTN----ACVTIGNFDGVHLGHQKLFNEVLHRARARRGGTSVAITFD 56

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP ++++    I  +S    + +++E+ G   L+   F+ E A  +AE F+ ++L+  L
Sbjct: 57  PHPLSVLRPEG-IQLISTMEQKLELVEQAGVDILLLIPFSKEFAKTTAEYFVDEILLGCL 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  ++ G  + FGK RAG+   L+  GE+YGF    +D    +  + VSS+ IR  +T 
Sbjct: 116 GIVELVVGYDYAFGKGRAGNIDFLRIEGERYGFPVTVVDAFYES-GEPVSSTRIRKLITA 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE-GVYAIRFRTQD 234
           G V  AA L+G  + I   V HG K G + LGFPTAN+ L+ + L+   GVY  +    D
Sbjct: 175 GDVAKAATLMGRNYQIRGKVQHGVKRGGSQLGFPTANLSLNKEYLIPHFGVYVAQI-IYD 233

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +Y+GV N GRNPT  P   L+ E  IFDF++EIYG+   ++   +LR E+ F DI  L
Sbjct: 234 GHTYNGVLNVGRNPTF-PENKLVAEVHIFDFNKEIYGKHIKINLLQFLRGEVSFPDIASL 292

Query: 295 KIYMGEDEKKARKIL 309
              +  D    + IL
Sbjct: 293 AKQIEADIALTKAIL 307


>gi|226226965|ref|YP_002761071.1| riboflavin kinase/FMN adenylyltransferase [Gemmatimonas aurantiaca
           T-27]
 gi|226090156|dbj|BAH38601.1| riboflavin kinase/FMN adenylyltransferase [Gemmatimonas aurantiaca
           T-27]
          Length = 326

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 165/307 (53%), Gaps = 10/307 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSS 66
           +++ LP    G VV +G FDG+HLGHH +L + ++ A     P  V++F+PHP  ++  +
Sbjct: 5   LDRGLPLPAGGAVVTVGTFDGVHLGHHDVLARLVEHAKVRGLPSVVVTFDPHPLEVVNPA 64

Query: 67  S--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +  P+ TL    ++  +    G S ++   FT   A + A  F+  VL +   V  ++ G
Sbjct: 65  AAPPLLTLHHEKLE--LFALSGVSYVVVLPFTTTLAGFDAAYFVDHVLRDQFAVSELLVG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               FG+ R GD G+L+  G++ GF    +  +       +SS+ IR A++ G +  AA 
Sbjct: 123 HDHGFGRGRMGDIGMLRTLGQERGFDVTVLAPVHTADGMTISSTVIRQAISDGDLNRAAA 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVA 242
            LG R+++   V+ G++ GRTLGFPT N+    +  +L  +GVYA+R +   Q ++ G+ 
Sbjct: 183 GLGRRYSVSGVVVRGDQRGRTLGFPTLNLGPVSERKLLPPDGVYAVRVQLP-QGTFGGML 241

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT   +G   +E+ +FD S + YG    + F  YLR    F  IE L+  + +DE
Sbjct: 242 NLGPRPTFGDHG-RRIETHVFDASHDWYGAPVRLDFVRYLRGTRPFPGIEALRAQLADDE 300

Query: 303 KKARKIL 309
           ++AR  L
Sbjct: 301 QQARDAL 307


>gi|167037617|ref|YP_001665195.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116032|ref|YP_004186191.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856451|gb|ABY94859.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929123|gb|ADV79808.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 316

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 160/278 (57%), Gaps = 6/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +  V++      +  +VSSS IR  +  G V  A  LLG  F+++  VIH
Sbjct: 137 TLKKYSKIYSYK-VYVVPPVIREGIVVSSSYIRELIKSGKVEEANSLLGRFFSLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D++L K GVY  R + +D+  Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIEDKF-YIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALK 291


>gi|149911070|ref|ZP_01899698.1| hypothetical protein PE36_22870 [Moritella sp. PE36]
 gi|149805896|gb|EDM65884.1| hypothetical protein PE36_22870 [Moritella sp. PE36]
          Length = 310

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 157/297 (52%), Gaps = 4/297 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +L  H +G V+ IGNFDG+HLGH  +L Q I+ A   N P TV++F P P  +I      
Sbjct: 9   NLKPHHQGCVLTIGNFDGVHLGHQSVLRQLIEKAKQLNLPATVMTFEPQPLEMIIGDKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    +   L+      L+   F  + A  SA++FI ++LV  L VK ++ G  FRF
Sbjct: 69  ARLTRLRDKYAALKDQHIDQLLCVNFNSKFAALSADEFITQLLVNKLGVKYLVVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQ  G KYGF  V +D     +++ VSS+ IR AL +  +  AA LLG  
Sbjct: 129 GHKRTGDFAMLQAAGAKYGFDVVSMDTFSVAQAR-VSSTMIRDALAQDDLDLAAELLGRP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F+I   V HG K+GRT+GFPTAN+ L   +    GVY +        +  GVAN G+ PT
Sbjct: 188 FSIFGKVAHGAKLGRTIGFPTANIPLKRCVDPINGVYVVEVLGISDDAIQGVANIGKRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            V      LE  +F+F  ++YG++  V     LR E KF   + L+  +  D   A+
Sbjct: 248 -VGGVRTQLEVNLFNFDGDLYGKQLEVVLKKRLRGEQKFASFDVLRQQIERDVIAAK 303


>gi|160880901|ref|YP_001559869.1| riboflavin biosynthesis protein RibF [Clostridium phytofermentans
           ISDg]
 gi|160429567|gb|ABX43130.1| riboflavin biosynthesis protein RibF [Clostridium phytofermentans
           ISDg]
          Length = 317

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 156/277 (56%), Gaps = 5/277 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDG+H GH L+L +  K       +V+ +F+ HP  +  S   I  +     ++
Sbjct: 16  CVTLGKFDGLHRGHQLLLSELAKFEQQGLTSVMFTFDYHPGNLF-SEKEIDLIYTEEEKK 74

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L ++G   LI Y FT ETA+   E FI++VL+  L+ K ++ G  +RFG+ R GD  +
Sbjct: 75  ELLSRLGPKVLISYPFTEETASMEPEDFIKEVLIGKLDAKAIVIGADYRFGRKRKGDAAL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K    YG+  V  ++L  + + ++SS+ IR  L  G + +   +LG+ +TI   V+ G
Sbjct: 135 LKKYSIMYGYELVICEKLTYHDN-VISSTRIREELKNGQMESVNEMLGHPYTIMGTVVTG 193

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            KIGRT+G PT N+  +   LL   GVYA   + Q+ T Y GV N G  PT+     L +
Sbjct: 194 NKIGRTIGVPTVNLLPAEHKLLPPNGVYASIIKFQENT-YYGVTNIGYKPTVGAGQKLGV 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           E+ IF F+ ++YG+   V  + Y RPE KF  IE+LK
Sbjct: 253 ETHIFGFTGDLYGKIIEVELYRYERPETKFTSIEELK 289


>gi|56477956|ref|YP_159545.1| riboflavin biosynthesis protein [Aromatoleum aromaticum EbN1]
 gi|56313999|emb|CAI08644.1| probable riboflavin biosynthesis protein [Aromatoleum aromaticum
           EbN1]
          Length = 312

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 160/309 (51%), Gaps = 12/309 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VF  I    +     +  V+ IGNFDG+H GH  +L+     A +   P  VL+F PH
Sbjct: 1   MQVFRGIPERAA-----QSSVLTIGNFDGVHRGHQALLKLLTDKARSLALPAVVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR     +     L+  S++EK+L     G   +   +F    A  +A+QFI  +LV  L
Sbjct: 56  PREYFCPADAPARLA--SLREKLLLLASCGVDRVHVCRFDARFAALTADQFIDDILVRGL 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V+ +I G  FRFG  R GD  +LQ RG  + F    +  L +   +  SSS IR AL +
Sbjct: 114 GVRHLIIGDDFRFGVKRQGDFALLQARGASHRFAVEAMPTL-DIDGERASSSAIRAALAE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G + +AA LLG  ++I   V+HG+KIGRTLG+PT N+Q+        GV+A+        
Sbjct: 173 GDLAHAARLLGRPYSIAGRVVHGDKIGRTLGYPTVNIQMKHRRPALSGVFAVAVEGLAAE 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             +GVA+ G  PT+  +G   LE  +FD++++ YG    V F +  R E KF+ ++ L  
Sbjct: 233 PVAGVASIGVRPTITASGRPRLEVHLFDWNRDCYGAHLRVHFLNKQRDETKFESLDALIA 292

Query: 297 YMGEDEKKA 305
            +  D + A
Sbjct: 293 QIARDAENA 301


>gi|117619272|ref|YP_855223.1| riboflavin biosynthesis protein RibF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560679|gb|ABK37627.1| riboflavin biosynthesis protein RibF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 324

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 15/306 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPR 60
           HNI+     P H +G V+ IGNFDG+H GHH +L    E+A ++    P  V+ F P P 
Sbjct: 8   HNIK-----PRH-RGCVLTIGNFDGVHQGHHAVLFRLQEKAAQL--GLPACVMLFEPQPL 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   ++    LS    + + L+ M    ++  +F    A  SA  FI+++LVE L V  
Sbjct: 60  ELFAGAAAPARLSRLREKYEALKGMQIDRMLCVRFNHRFAEQSATTFIEQLLVEKLGVHY 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  FRFGK R GD  +L++ G ++GF  +     + ++ Q VSS+ +R AL  G + 
Sbjct: 120 LVVGDDFRFGKGREGDFHLLEEAGRRFGFEVISTQSFQLSR-QRVSSTLVREALAAGRMA 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
               +LG  +TI   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T + G
Sbjct: 179 EVELMLGRPYTISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVLCSGKT-FPG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  PT+       LE  +FDFS ++YGQ+  V     LR E KF     LK  +  
Sbjct: 238 VANVGVRPTL-SGTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFASFTALKEQIER 296

Query: 301 DEKKAR 306
           D   AR
Sbjct: 297 DALAAR 302


>gi|257094114|ref|YP_003167755.1| riboflavin biosynthesis protein RibF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046638|gb|ACV35826.1| riboflavin biosynthesis protein RibF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 307

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 157/292 (53%), Gaps = 3/292 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+HLGH  +L +    A  + +   VL+F PHPR      SP   LS    +
Sbjct: 16  VLTIGNFDGVHLGHRALLARLTAAAAKAGLPAAVLTFEPHPREFFAPHSPPSRLSTLREK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++   G        F    A ++ E+FI++VLV  L V+ +I G  FRFG  RAG+  
Sbjct: 76  LELIADDGVDLAYVCHFNARFAAFAPEEFIERVLVGALRVRHLIVGDDFRFGARRAGNFA 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++ G   GF    ++ +  N  +  SSS +R AL +G + +AA LLG  ++I+  V+H
Sbjct: 136 LLREAGAHLGFQVEAMESVTLNGER-ASSSAVRDALQEGRLEHAARLLGRPYSIDGRVVH 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+KIGR LGF TAN+++  +    +GV+A+  +      + G AN G  P+       LL
Sbjct: 195 GDKIGRQLGFATANIRIKHERPPLQGVFAVEVKGLPGGPHRGAANLGYRPSANQVVRPLL 254

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  +FDFS +IYG    V F   LR E+KF D   LK  +  D + A+   +
Sbjct: 255 EVHLFDFSADIYGAHLNVRFLHKLRDEVKFPDFNALKAQIASDVEAAKAYFQ 306


>gi|86140924|ref|ZP_01059483.1| putative riboflavin kinase [Leeuwenhoekiella blandensis MED217]
 gi|85832866|gb|EAQ51315.1| putative riboflavin kinase [Leeuwenhoekiella blandensis MED217]
          Length = 311

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 169/300 (56%), Gaps = 11/300 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSP 74
           LKG VV IG FDG+HLGH  I+++ +  A ++ +   VL+F PHPR ++Q  + I  ++ 
Sbjct: 13  LKGTVVTIGTFDGVHLGHRKIIDRLLASAQSNDLESVVLTFFPHPRMVLQKDTGIKLIN- 71

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            SI E+I  LE  G   LI + FT E +  +AE+F++ +LV+ L+ + VI G   RFG++
Sbjct: 72  -SIDERIALLEACGLDHLIIHPFTQEFSRLTAEEFVKDILVDQLKARKVIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  +   L+  GE+Y F    I + ++     VSS+ +R AL +G++  A   LGY F +
Sbjct: 131 RNANIDDLKAFGEQYDFEVEEISK-QDVDDVAVSSTKVRKALDEGNITLANEYLGYPFML 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V  G+ +G+   +PTAN+++  D  L   +GVY ++    ++  Y G+ + G NPT 
Sbjct: 190 NGIVSRGKGLGKKFNYPTANLKIEEDYKLIPAKGVYVVQATLANERVY-GMMSIGTNPT- 247

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           V    L +E+F FDF   +Y Q   +     +R E KF  +++L   M  DEK +R  ++
Sbjct: 248 VGGSDLTIETFFFDFDANLYDQHLQIELLTRIRDEKKFNSVDQLIAAMQADEKFSRDFIQ 307


>gi|319953430|ref|YP_004164697.1| riboflavin biosynthesis protein ribf [Cellulophaga algicola DSM
           14237]
 gi|319422090|gb|ADV49199.1| riboflavin biosynthesis protein RibF [Cellulophaga algicola DSM
           14237]
          Length = 309

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 161/297 (54%), Gaps = 17/297 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H+GH  +L++ I  A   N   TVL+F PHPR I+Q  + I  L+    + 
Sbjct: 18  VTIGTFDGVHIGHRKLLDRLINDAKLLNLKATVLTFFPHPRMILQQDANIKLLNTIDEKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           KILE +G   L+ Y F+ E +  SA  F++ +LV+ L  K +I G   RFG++R  D   
Sbjct: 78  KILENIGLDYLMIYPFSKEFSRLSATDFVESILVKGLASKKIIIGYDHRFGRNRNADIKD 137

Query: 140 LQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           L   G+ Y F         IDE+       VSS+ IR AL +G +  A   LGY + +  
Sbjct: 138 LISFGKIYSFEVEEIPAQEIDEVS------VSSTKIRKALEEGDITTANAYLGYNYMLTG 191

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            VIHG+ +G+ L FPTAN+ +  +  L    GVY ++    + T Y G+ N G NPT V 
Sbjct: 192 TVIHGKGLGKQLSFPTANIHIEENFKLIPLNGVYVVKSEIDNATVY-GMMNIGFNPT-VS 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                +E   FDF Q++YG++  +   + LR E KF  +E+LK  + +D+K +  ++
Sbjct: 250 GKEKSIEVHFFDFDQDLYGKKIQIDILERLRDEHKFNSVEELKKQLEQDKKTSLSLI 306


>gi|284929070|ref|YP_003421592.1| FMN adenylyltransferase /riboflavin kinase [cyanobacterium UCYN-A]
 gi|284809529|gb|ADB95234.1| FMN adenylyltransferase /riboflavin kinase [cyanobacterium UCYN-A]
          Length = 314

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 165/310 (53%), Gaps = 11/310 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + I  S+ N      VA+GNFDGIHLGH  +L+  +K A     TV++F PHP+      
Sbjct: 8   VWIPSSIDNAKTPTAVALGNFDGIHLGHRQVLKPILKFAKQYVPTVVTFEPHPQEFFTGE 67

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    L+P   + +IL  +    LIR  F  + A+ S  +FI  +LV  L V+ +  G  
Sbjct: 68  TRQL-LTPIDEKVQILNSLNIKQLIRLPFNQDLASLSPLEFIIDILVGKLNVRYISVGEN 126

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT------VFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           F FG  + G   +L+   E++G          F+   + N  +I SSS IR  L  G + 
Sbjct: 127 FYFGHKKTGTVELLRDFTERFGISVNTIRLETFLTSDKKNPLRI-SSSKIREYLADGSIA 185

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYS 239
               +LGY + +   VI G++IGRT+GFPTAN++L  + LL   GVY +    +++    
Sbjct: 186 EVNQMLGYSYFLRGIVISGQQIGRTIGFPTANLKLPTNKLLPCNGVYCVYVEFENKDIIK 245

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GV N G+ PT+  +G L +E  + D+S  +YG++ TV    +LR E KF  ++ L+  + 
Sbjct: 246 GVMNVGKRPTI--DGSLTVEVHLLDWSGNLYGKKLTVYLEKFLRYETKFPSLQALRNQIE 303

Query: 300 EDEKKARKIL 309
           +D KKAR IL
Sbjct: 304 QDCKKARSIL 313


>gi|320540431|ref|ZP_08040081.1| bifunctional riboflavin kinase/FAD synthetase [Serratia symbiotica
           str. Tucson]
 gi|320029362|gb|EFW11391.1| bifunctional riboflavin kinase/FAD synthetase [Serratia symbiotica
           str. Tucson]
          Length = 310

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 12/306 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI+          G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +
Sbjct: 8   HNIQARH------HGCVLTIGNFDGVHRGHQAVLEQLQQEGQRLGLPVMVMIFEPQPLEM 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
             +      L+    + K L + G   L+  KF    A  +A+ FI ++LVE L VK +I
Sbjct: 62  FATDQAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFIAELLVEKLGVKLLI 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  R GD  +LQ+ G++YGF  V     R    Q +SS+ IR AL  G +  A
Sbjct: 122 VGDDFRFGAGRQGDFTLLQQAGKEYGFEVVSTSTFREG-GQRISSTAIRHALDDGALPLA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
            +LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVA
Sbjct: 181 ENLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPDPLPGVA 240

Query: 243 NFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT+  +G    LE  + D + ++YG+   V     +R E +F  ++ LK  + +D
Sbjct: 241 NIGTRPTL--DGVCQQLEVHLLDVTMDLYGRHIDVVLRMKMRNEQRFASLDALKQQIADD 298

Query: 302 EKKARK 307
              ARK
Sbjct: 299 VVTARK 304


>gi|56751037|ref|YP_171738.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechococcus elongatus PCC 6301]
 gi|81299303|ref|YP_399511.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechococcus elongatus PCC 7942]
 gi|56685996|dbj|BAD79218.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168184|gb|ABB56524.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus
           elongatus PCC 7942]
          Length = 315

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 162/297 (54%), Gaps = 8/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP---ITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            +A+GNFDGIHLGH  ++        + P    +V++FNPHP+    S   + +++P + 
Sbjct: 15  AIALGNFDGIHLGHQQVIAPVRAAHRSHPDWMPSVVTFNPHPQAFF-SGDRLPSITPVAE 73

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L+ +G   L+   FT E AN + EQF+ +VLV+ L+ + +  G  FRFG+ R+G  
Sbjct: 74  KAELLQGLGIEQLVLLPFTRELANLTPEQFVSEVLVQHLQARQISVGQDFRFGRGRSGSA 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ   +  G  T  +  L  ++   VSSS IR AL +G    AA  LG  + +   VI
Sbjct: 134 QDLQAIAQGRGIPTTIV-PLFKHRDLRVSSSAIRKALDQGQPELAAAWLGRPYRLTGCVI 192

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS--GVANFGRNPTMVPNG 254
            G+++GR LG PTAN+QL  D LL + GVYA R    +Q  ++   V N G+ PT+  + 
Sbjct: 193 LGQQLGRQLGTPTANLQLPADKLLPRWGVYAGRAHLPEQGLHNLPAVLNVGQRPTVTGDR 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +E  + D+  + YGQ   V    +LRPE KF  +  L   + +D + AR  L +
Sbjct: 253 SVSVEVHLLDWQGDCYGQLLQVDLLHFLRPEQKFDSLSALTQQIQQDCRLARSQLAT 309


>gi|126662584|ref|ZP_01733583.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteria bacterium BAL38]
 gi|126625963|gb|EAZ96652.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteria bacterium BAL38]
          Length = 310

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 157/294 (53%), Gaps = 17/294 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++ +G FDG+HLGH  IL++  K          VL+F PHPR ++   S I  L+  
Sbjct: 14  KKTILTLGTFDGVHLGHKSILDKLKKGTEKGHYESVVLTFFPHPRMVLNQDSSIKLLNTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LE  G   LI + F    +N +AE F++ +LV+ L ++ +I G   RFGK+R  
Sbjct: 74  DEKTILLENFGIDTLIIHPFDAAFSNLTAEDFVKDILVDQLNIQKIIIGYDHRFGKNRTA 133

Query: 136 DRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           D   L   GEKYGF         IDE+       +SS+ IR AL  G +      LGY +
Sbjct: 134 DINDLIAFGEKYGFEVAQIGAKEIDEIA------ISSTKIRKALLGGDIKLTNQYLGYSY 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            I   V+ G+KIGRT+GFPTAN++LS    +L K GVY +  +  D T + G+ N G NP
Sbjct: 188 FISGKVVEGKKIGRTIGFPTANIELSETYKLLPKNGVYIVSSKIND-TLFYGMMNIGNNP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           T+  N    +E   F+ +Q+IY     +S   ++R E KF  I++LK  +  D+
Sbjct: 247 TIGDN-EQSIEVHFFELNQDIYNHNLQISILKHIREEQKFNSIDELKSQLENDK 299


>gi|152998226|ref|YP_001343061.1| riboflavin biosynthesis protein RibF [Marinomonas sp. MWYL1]
 gi|150839150|gb|ABR73126.1| riboflavin biosynthesis protein RibF [Marinomonas sp. MWYL1]
          Length = 309

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 4/290 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IGNFDG+HLGH  IL +   +A   NSP  ++ F P PR      +    +   
Sbjct: 15  KECVLTIGNFDGVHLGHGAILARVKALAKQYNSPAAIMIFEPQPREFFAPDTAPGRIGRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K+LE  G   ++   F  +     A+ F Q++L++ L VK ++ G  FRFG DR G
Sbjct: 75  RDKVKLLEGQGIDYVLCMPFNPKLQQLDAQAFCQQILLDGLSVKHLVVGDDFRFGCDRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ G ++GF       + N  ++ VSS+ +R AL +G +  A   +G+  ++   
Sbjct: 135 DFYYLQEFGGQHGFDVENTPSVLNALNERVSSTLVRDALERGDIAAAQMNMGHSVSLSGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GR LGFPTAN+ L        GVYA+ F   D  S++GVAN G  PT+    P
Sbjct: 195 VVHGQQLGRKLGFPTANVHLKGIKSALSGVYAVTFMV-DSVSHNGVANIGVRPTVQGKTP 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            +LE  + DFS ++Y +   V+F  ++R E K   ++ L+  +  D+++A
Sbjct: 254 -ILEVHLLDFSGDLYDKYVQVTFCHFIRAERKMASLDALEKQIQCDKEEA 302


>gi|163814219|ref|ZP_02205611.1| hypothetical protein COPEUT_00373 [Coprococcus eutactus ATCC 27759]
 gi|158450668|gb|EDP27663.1| hypothetical protein COPEUT_00373 [Coprococcus eutactus ATCC 27759]
          Length = 323

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 15/303 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VA+G FDGIH GH L++EQ +K+  +  +  V +F+     +   S+ + T+     + +
Sbjct: 20  VALGKFDGIHQGHMLLIEQVLKLQKHGYMGVVFTFDMRENHVFDVSN-MKTIYTSEEKAQ 78

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++   G   L+ Y F    A    E FI+ +LV  +    V+ G+ +RFG+DR GD   L
Sbjct: 79  VVSDTGVDVLVEYPFDDAFAATEPEAFIRDILVGMMRAGYVVVGSDYRFGRDRKGDVETL 138

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   E+YG+  + ID+L  +  ++VSS+ IR  +++G+V     +LG  +++  +V+ G+
Sbjct: 139 KSHAEEYGYKVIVIDKLEQD-DEVVSSTVIRRNISEGNVRAVIPMLGRPYSMTGEVVSGK 197

Query: 201 KIGRTLGFPTANMQLSPDILL--KEGVYAIRFRT--------QDQ-TSYSGVANFGRNPT 249
           ++GRT+G PTANM L  D  L    GVYA R +         +D    Y G+ N G NPT
Sbjct: 198 QLGRTIGIPTANM-LPQDHKLYPPAGVYASRIKIVKGEHAGHEDPFRMYMGITNIGDNPT 256

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  NG + +E+ IFDF ++IYG    V     +R E KF  IE+LK  M  D   A+KI+
Sbjct: 257 VNDNGNITIETNIFDFDRDIYGNIIKVELIQKIRGEKKFAGIEELKKQMSNDIDAAKKII 316

Query: 310 ESS 312
             S
Sbjct: 317 VDS 319


>gi|120437823|ref|YP_863509.1| riboflavin kinase / FAD synthetase [Gramella forsetii KT0803]
 gi|117579973|emb|CAL68442.1| riboflavin kinase / FAD synthetase [Gramella forsetii KT0803]
          Length = 311

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 168/298 (56%), Gaps = 7/298 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IG FDG+H GH  I+E+ +  AN  N    VL+F PHPR ++Q  S I  ++    +
Sbjct: 17  VVTIGTFDGVHAGHRKIIERLVNSANANNLDSVVLTFFPHPRMVLQKESGIQLINTIEER 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +L + G   L+ + FT + +  +A +F++ +LV  L+ K +I G   RFG++R  D  
Sbjct: 77  KNLLRETGIDHLVIHPFTHQFSRLTALEFVRDILVNKLKAKKIIIGYDHRFGRNRTADIN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++ G+ +GF    I + ++ +   VSS+ IR AL  G V  A   L + FT++  ++ 
Sbjct: 137 DLKQFGKDFGFEVEEISQ-QDVEQVAVSSTKIRNALLDGRVERANMYLQHPFTLKGTIVR 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G  IG+ LGFPTAN++++ D  L  K GVY +     D  + +G+ N G NPT V     
Sbjct: 196 GRGIGKDLGFPTANLEVAEDYKLIPKNGVYVVS-TIIDGKAVNGMMNIGTNPT-VGGKEK 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +ES+ FD  +++YG++  +     +R E KF  +  LK+ M +D+  +++ L+ ++ 
Sbjct: 254 TIESYFFDLDKDLYGKQLEIELLVRIRDEKKFTSVNDLKVAMKQDQAFSKQYLKDNHA 311


>gi|194333214|ref|YP_002015074.1| riboflavin biosynthesis protein RibF [Prosthecochloris aestuarii
           DSM 271]
 gi|194311032|gb|ACF45427.1| riboflavin biosynthesis protein RibF [Prosthecochloris aestuarii
           DSM 271]
          Length = 321

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 173/316 (54%), Gaps = 15/316 (4%)

Query: 1   MHV--FHNIEIN-----QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--T 51
           MHV  +HN  ++     Q  P  L    V +G++DG+H+GH  I+ + + IA+   +   
Sbjct: 1   MHVAEYHNGSVSYTTTGQDNPFPLMASAVTVGSYDGVHVGHRRIIGRMLDIASQERLRSV 60

Query: 52  VLSFNPHPRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
           V++F PHPR +I S  SS I  L+ PS +  ++E +G   L   +F    A+ S+E FIQ
Sbjct: 61  VVTFEPHPRQVIASGRSSAIELLTLPSEKRLLMESLGIDVLFVVRFDALFASRSSEWFIQ 120

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +L++ +  + ++ G    FG+DR G R  L+K   + GF    +DE+R +     SS+ 
Sbjct: 121 HILLDLIGARHIVIGYDHGFGRDRTGGRRTLEKLAGERGFSVDVVDEVRLHDEHF-SSTR 179

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYA 227
           IRT L +G +  A   LG  + I   V+HG+ +GR +GFPT N++L+ PD LL + GVY 
Sbjct: 180 IRTLLHEGRLREANAFLGAPYMISGQVVHGQGLGRKIGFPTVNIKLADPDKLLPRHGVY- 238

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           I     D   Y  + N G  PT+      ++E+ I  +S  +YG+   +  F+ LR E K
Sbjct: 239 IAETHLDGQKYKVMMNIGIRPTVSDGSGAVIEAHILGYSSSLYGREVHLWLFERLRDEKK 298

Query: 288 FKDIEKLKIYMGEDEK 303
           F+ ++ L+  + +D+K
Sbjct: 299 FESLDALREQLQKDKK 314


>gi|242242555|ref|ZP_04797000.1| FAD synthetase [Staphylococcus epidermidis W23144]
 gi|242233982|gb|EES36294.1| FAD synthetase [Staphylococcus epidermidis W23144]
          Length = 323

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 15/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +   + A    +   V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + +++ + G    I   F+   A+ +++ FI+K ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFASVTSDDFIKKYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ   E   F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---ESKAFNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPARAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   M ED+ KA+ +L
Sbjct: 296 LVKQMNEDKAKAKHLL 311


>gi|312194989|ref|YP_004015050.1| riboflavin biosynthesis protein RibF [Frankia sp. EuI1c]
 gi|311226325|gb|ADP79180.1| riboflavin biosynthesis protein RibF [Frankia sp. EuI1c]
          Length = 316

 Score =  172 bits (437), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 159/297 (53%), Gaps = 11/297 (3%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P   +GGVV IG FDG+H+GH  I+ +A++ A     P+ VL+F+PHP  +++  S    
Sbjct: 11  PVDWRGGVVTIGFFDGVHVGHRKIIGRAVERATALGLPLLVLTFDPHPGEVLRPGSHPAL 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + ++L  +G  AL    FTLE +   A++F+ K+LVE L  + V+ G  F +G 
Sbjct: 71  LTTLQFKTELLAAIGVDALCVQPFTLEFSEVPADEFVAKILVETLRARVVVVGQNFSYGH 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRN------NKSQIVSSSNIRTALTKGHVLNAAHL 185
              G    L + G ++GF    +  LR+      + + +VSS++IR  + +G V  AA  
Sbjct: 131 RALGRIDTLVRSGAQHGFEVDAMPLLRDDHQAGPDSTPVVSSTHIRAQVAEGDVAGAAQG 190

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+HG+  GRT+GFPTAN+Q++P   +  +GVYA  +            + 
Sbjct: 191 LGRLHRVEGVVVHGDARGRTIGFPTANLQVTPWAAIPADGVYA-GYACWSGRRQPAAISI 249

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           G NPT        +E+F+ DF  ++YG+     F   LRP +KF  +E+L   M  D
Sbjct: 250 GTNPTFAGR-ERRVEAFLLDFDGDLYGEYMAFEFVALLRPTLKFNSVEELVSQMTLD 305


>gi|262163907|ref|ZP_06031646.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus VM223]
 gi|262172242|ref|ZP_06039920.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus MB-451]
 gi|261893318|gb|EEY39304.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus MB-451]
 gi|262027435|gb|EEY46101.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus VM223]
          Length = 322

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 153/296 (51%), Gaps = 10/296 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    + +AA +LG  ++I 
Sbjct: 133 KGNFALLQQAGQAFGFEVVSTQSF-CLQQQRVSSTAIREALAADELTSAADMLGRNYSIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG+K+GRT+GFPTAN+ L   +    GVY +      QT   GVAN G  PT V  
Sbjct: 192 GRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPIGGVANIGNRPT-VDG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  L
Sbjct: 251 IRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWL 306


>gi|292492814|ref|YP_003528253.1| riboflavin biosynthesis protein RibF [Nitrosococcus halophilus Nc4]
 gi|291581409|gb|ADE15866.1| riboflavin biosynthesis protein RibF [Nitrosococcus halophilus Nc4]
          Length = 310

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 159/302 (52%), Gaps = 9/302 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQ-AIKIAN-NSPITVLSFNPHPRTII--QSSSPI 69
           P H +GGV  IGNFDGIHLGH  +L + A K A    P  +++F P P      + +   
Sbjct: 13  PCH-RGGVATIGNFDGIHLGHQAVLGRLAAKAAEFQRPSLLITFEPSPEEFFTPEGAPAR 71

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            T     IQ    + + +   +R+   L  A   A+ FI+ VLVE L ++ +I G  FRF
Sbjct: 72  LTRFREKIQALRCQPLDWVLCLRFDHAL--AGMEADDFIRIVLVEKLGLRYLIVGEDFRF 129

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+DR GD  +LQ+ GE YGF    +  L   + + VSS+ IR ALT+G +  A   LG  
Sbjct: 130 GRDRCGDLNLLQRAGEHYGFEVATMPTL-CLEGERVSSTRIREALTRGDLAQAEKFLGRP 188

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +   ++ G+K GRTLGFPTAN+ L        GV+A+  +        GVAN G  PT
Sbjct: 189 YHMSGRIVEGDKRGRTLGFPTANIGLHRRRTPFTGVFAVAVQGLAAAPLPGVANVGVRPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +     LLE  + DF  +IYG+   V+F   LRPE +F+ +  L+  + +D   AR+  
Sbjct: 249 -IGGRRALLEVHLLDFEGDIYGRYVQVTFLRQLRPEQRFESLSALRQQIEKDCVAAREFF 307

Query: 310 ES 311
            +
Sbjct: 308 AA 309


>gi|258624721|ref|ZP_05719655.1| Riboflavin biosynthesis protein [Vibrio mimicus VM603]
 gi|258583008|gb|EEW07823.1| Riboflavin biosynthesis protein [Vibrio mimicus VM603]
          Length = 322

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 153/296 (51%), Gaps = 10/296 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    + +AA +LG  ++I 
Sbjct: 133 KGNFALLQQAGQAFGFEVVSTQSF-CLQQQRVSSTAIREALAADELTSAADMLGRNYSIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG+K+GRT+GFPTAN+ L   +    GVY +      QT   GVAN G  PT V  
Sbjct: 192 GRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPIGGVANIGNRPT-VDG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  L
Sbjct: 251 IHQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWL 306


>gi|21242007|ref|NP_641589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21107405|gb|AAM36125.1| riboflavin biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 340

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +   AE F++  LV
Sbjct: 61  EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMRAEDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  +I S++ IR  
Sbjct: 114 ARLRAREVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLHGERI-SATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G    A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA      
Sbjct: 173 LGAGEFARAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D ++AR++L +
Sbjct: 291 LTVQMHRDAEQAREVLAA 308


>gi|323497795|ref|ZP_08102809.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           sinaloensis DSM 21326]
 gi|323317142|gb|EGA70139.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           sinaloensis DSM 21326]
          Length = 314

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/310 (36%), Positives = 164/310 (52%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI+     P+H  G V+ IGNFDG+HLGH  +L Q  + A     P TV++F+P P  +
Sbjct: 8   HNIQ-----PHH-TGCVLTIGNFDGVHLGHQAVLRQVSEKAKQLGLPSTVMTFDPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F  + AN SA++FI  +LV+ L VK ++
Sbjct: 62  FARDKAPARLTRLRDKFVQLSKLNIERLLCVNFNHQFANQSADEFISDLLVKRLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ G+K+GF  V      + +LR      VSS+ IR AL + 
Sbjct: 122 VGDDFCFGKGRRGNFAMLQEAGKKHGFDVVSTQSFCLQQLR------VSSTAIREALAQD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++        
Sbjct: 176 KLEQAAEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVQALGLGDEP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G  PT+  NG    LE  +FDF   +YG++  +   D +R E KF+  + LK 
Sbjct: 236 IGGVANIGNRPTV--NGVRQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFDALKQ 293

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 294 QIELDAEAAR 303


>gi|296132892|ref|YP_003640139.1| riboflavin biosynthesis protein RibF [Thermincola sp. JR]
 gi|296031470|gb|ADG82238.1| riboflavin biosynthesis protein RibF [Thermincola potens JR]
          Length = 313

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 172/313 (54%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFNP 57
           M V+++I   ++ PN     VVA+GNFDG+HLGH  ++ +  K+A+    +P+ V +F+P
Sbjct: 1   MEVYYDIRDVKNYPNP----VVALGNFDGVHLGHRELVRRTRKMADEISGTPV-VFTFDP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++   S    L P   + K++ ++G + ++   F+   AN     F++K+LVE + 
Sbjct: 56  HPLKVLLPDSYPPLLLPKEEKIKMMAELGIAVMVIAGFSRRMANLEPADFMKKILVEGVG 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F FGK   G   +L++   +  +    +  +  +  + VSS+ IR  L +G
Sbjct: 116 AKGIIVGYNFSFGKGGKGTPELLREYAPEGNYRVDVVPPVTVDGVE-VSSTLIRQLLLRG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT 236
            V  A   LGY   +   V++G ++GR +GFPTAN+ L+ +IL+  +GVYA+R     + 
Sbjct: 175 EVTEARKYLGYFPYVRGKVVYGVQLGRKIGFPTANLDLNHEILVPAKGVYAVRVSCLGE- 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + GVAN G  PT+    P+ LE  IFDF   +YG    V F   LR E  F+D+E+L  
Sbjct: 234 KHCGVANIGNKPTLKKENPVNLEVHIFDFDGNLYGHEIKVEFVARLRAEKSFQDLEELTR 293

Query: 297 YMGEDEKKARKIL 309
            +  D   AR+IL
Sbjct: 294 QICIDAGLARRIL 306


>gi|261749622|ref|YP_003257308.1| riboflavin biosynthesis protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497715|gb|ACX84165.1| riboflavin biosynthesis protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 319

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 7/305 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI---KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           V  +G FDG+H GH  +++  I   K        +L+FNPHP+ ++     I  L+  S 
Sbjct: 17  VFTLGFFDGVHRGHQRVIQNLIFRAKKKEEYCSVLLTFNPHPKEVLNPGKKILYLNTLSE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L K G   LI + FT+  +  SA+ F+QK+L   L++K +ITG     GKDR G  
Sbjct: 77  RIYHLRKTGVEHLIIHPFTINFSKLSAKDFLQKILFSKLKIKQIITGYDSHLGKDRDGSS 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K  + YGF    +      K +I+SS+ IR +L KG++  A   LGY +T+   VI
Sbjct: 137 HQLKKFSQIYGFKLYQVSP-HKLKKKIISSTYIRKSLLKGNIEWANKALGYLYTLSGYVI 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM-VPNGP 255
            G  IGRTL FPTAN+Q+    L+ K+GVYA++    +Q  Y G+ N G  PT+ + N  
Sbjct: 196 KGRGIGRTLNFPTANVQVDKKKLIPKKGVYAVKINYLNQI-YQGMMNIGICPTIHLFNKE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + +E  IFDF Q IYG++  V      R E+KF+ +  LK  + +D+ K +         
Sbjct: 255 IKIEVHIFDFHQNIYGKKIDVLIVQIFRDEMKFQTLHDLKRQISQDKMKIKNFFNQIIYC 314

Query: 316 SERDR 320
            +++R
Sbjct: 315 EKKNR 319


>gi|294627039|ref|ZP_06705629.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598701|gb|EFF42848.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 340

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 20/317 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSS--PIFTLSPPSIQEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLVE 114
                ++  P  TL+    + KI    GF A    +IR+   L  +   AE F++  LV 
Sbjct: 61  EFFAPAALPPRLTLA----RAKIEGLYGFGADSVGMIRFDGRL--SKMCAEDFVRLALVG 114

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + V  G +FRFG  RAGD G+L+  GE++GF    I  +  +  +I S++ IR  L
Sbjct: 115 RLRAREVWIGPEFRFGHRRAGDIGLLRTLGEQHGFVAGEIAPVHLHGERI-SATRIRELL 173

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       
Sbjct: 174 GAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVA 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L
Sbjct: 233 ERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEAL 291

Query: 295 KIYMGEDEKKARKILES 311
            + M  D ++AR++L +
Sbjct: 292 TVQMHRDAEQAREVLAA 308


>gi|86607031|ref|YP_475794.1| riboflavin biosynthesis protein RibF [Synechococcus sp. JA-3-3Ab]
 gi|86555573|gb|ABD00531.1| riboflavin biosynthesis protein RibF [Synechococcus sp. JA-3-3Ab]
          Length = 310

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 6/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + +   L   L+   VAIGNFDG+HLGH  +L Q I+ +     TVL+F+PHP+ ++   
Sbjct: 1   MHVTSDLAQTLRPTAVAIGNFDGLHLGHQKVL-QPIRDSLQGVRTVLTFHPHPQEVLTGR 59

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             +  L+PP+ +  +L +MGF  ++   FT   A    ++FIQ VL + L V+ +  G  
Sbjct: 60  RQLL-LTPPAEKLALLAQMGFEQVVLLPFTPAFARQPPQEFIQTVLEQGLRVRHLSVGWD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  R+G+   LQ  G +       I E    K + VSSS IR AL  G V  A  LL
Sbjct: 119 FCFGHRRSGNAQTLQAWGSERCIPVEVIPEA-QLKGERVSSSRIRAALATGEVAAATELL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSGVANF 244
           G  + +  +V+ G++ GR LGFPTAN++L P+  L ++GVY++      +  +  GV N 
Sbjct: 178 GRPYRLIGEVVPGDRRGRELGFPTANLRLPPEKFLPRDGVYSVWVNVPAEAAALPGVMNI 237

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT        +E  + D++ ++YGQ   V+   ++RPE +F  +  L   + +D + 
Sbjct: 238 GHRPTFA-GLQHTVEVHLLDWTGDLYGQEVQVALQGFIRPERRFPSVADLIQQIRQDCQT 296

Query: 305 ARKIL 309
           AR+ L
Sbjct: 297 ARQQL 301


>gi|291538571|emb|CBL11682.1| riboflavin kinase/FMN adenylyltransferase [Roseburia intestinalis
           XB6B4]
          Length = 309

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPSIQ 78
           V+++G FDGIH GH L++E  A K        + +FN  PR ++ Q  + + T +   + 
Sbjct: 17  VLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEAKVLTTNEEKMH 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD  
Sbjct: 77  --IFEQIGIDYLVECPFTREIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGDYH 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   +KYG+  + ID+++ +K  I SS+ +R  + KG++  A HLLGY + +  +++H
Sbjct: 134 MLKDLSDKYGYEVLVIDKMQEDKRDI-SSTFVREEIAKGNIEKANHLLGYHYFVTGEILH 192

Query: 199 GEKIGRT-LGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G  +G T LG PT N Q+ P+  +L + GVY    R  D+ SY GV N G  PT+    P
Sbjct: 193 GRHLGSTKLGIPTIN-QIPPEEKLLPESGVYVTEVRLGDR-SYRGVTNVGVKPTIEGKNP 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 251 VGVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|332289397|ref|YP_004420249.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Gallibacterium anatis UMN179]
 gi|330432293|gb|AEC17352.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Gallibacterium anatis UMN179]
          Length = 312

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 158/308 (51%), Gaps = 14/308 (4%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPI 69
           +LP    G  + IGNFDG+HLGH  IL    + A     P  V+ F P  +         
Sbjct: 9   NLPTFPNGCALTIGNFDGVHLGHQTILRHLKQKAQQLGLPTVVMLFEPQAKEFFLKQKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +   L + G   +    F    A  SAEQFIQ  L+E L VK +  G  FRF
Sbjct: 69  ARLMRLRDKLTALAQFGIDYVFCVPFNAAFAQQSAEQFIQHYLIEKLRVKFLSVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKGHVLNAAH 184
           G +R+G+   LQK G++YGF      ++ NN S     Q VSS+ IR AL +  +     
Sbjct: 129 GINRSGNFATLQKAGKQYGF------QVENNASYCLAQQRVSSTAIREALAQDKLEQVEQ 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  ++I   V+HG ++GRT+GFPTAN+ L  ++   +GVYA+  + +    Y GVAN 
Sbjct: 183 MLGRPYSILGRVVHGNELGRTIGFPTANIGLHRNVNPIQGVYAVEVKDKANHHYYGVANV 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+    P LLE  +FDF+ ++YGQ   + F   LR EIKF     L+  +  D + 
Sbjct: 243 GNRPTINGFKP-LLEVHLFDFNGDLYGQTLEIFFKLKLRSEIKFPSFVALQQQIKLDAEN 301

Query: 305 ARKILESS 312
           A++  + +
Sbjct: 302 AKRYFQQN 309


>gi|86609648|ref|YP_478410.1| riboflavin biosynthesis protein RibF [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558190|gb|ABD03147.1| riboflavin biosynthesis protein RibF [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 310

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 6/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + I   L   L+   VAIGNFDG+HLGH  +L Q I+ +     TVL+F+PHP+ ++ + 
Sbjct: 1   MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVL-QPIRDSLQGVRTVLTFHPHPQEVL-TR 58

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            P   L+PP+ +  +L +MGF  ++   FT   A    ++FIQ VL + L V+ +  G  
Sbjct: 59  RPQLLLTPPAEKLDLLAQMGFEQVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  R+G+   LQ  G +       I E + N  + VSSS IR AL  G V  A  LL
Sbjct: 119 FCFGHRRSGNAQTLQAWGSERCIPVEVIPETKLNGER-VSSSRIRAALATGEVSTAEALL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSGVANF 244
           G  + +  +V+ G++ GR LGFPTAN++L P+  L ++GVY++         +  GV N 
Sbjct: 178 GRPYRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNI 237

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT        +E  + D++ ++Y Q   V+   ++RPE +F  +  L   + +D + 
Sbjct: 238 GHRPTFA-GLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQT 296

Query: 305 ARKIL 309
           AR+ L
Sbjct: 297 ARQQL 301


>gi|325914856|ref|ZP_08177191.1| FMN adenylyltransferase ;riboflavin kinase [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538947|gb|EGD10608.1| FMN adenylyltransferase ;riboflavin kinase [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 343

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 5/294 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDG+HLGH  +++ AI  A     P   LSF P PR     ++P   L+    +
Sbjct: 1   MVCIGAFDGLHLGHRTLVQHAIARARALGVPAVALSFEPLPREFFAPAAPPPRLTLARAK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G  ++   +F    +  SAE F++  LV  L  K V  G +FRFG  R GD  
Sbjct: 61  IEGLYDFGADSVGLIRFDGRLSKMSAEDFVRLALVGRLCAKEVWIGPEFRFGHRRGGDIA 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  GE+YGF    I  +  +  +I S++ IR  L  G  ++AA LLG  + I   V+ 
Sbjct: 121 LLRALGEQYGFVAGEITPVHLHGERI-SATRIRELLGAGEFVHAADLLGRPYAIGGRVVR 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRTLG+PTAN++  P      G+YA       +  +  V++FG  PT+    P LL
Sbjct: 180 GKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVSEQPWPSVSSFGTRPTVAGVEP-LL 237

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           E+ +FDF  ++YG+   V F   LR E KF  ++ L + M  D ++AR +L++S
Sbjct: 238 EAHLFDFQGDLYGRHLEVEFVAKLRDEEKFDGLDALTVQMHRDAEQARAVLKAS 291


>gi|240146069|ref|ZP_04744670.1| riboflavin biosynthesis protein RibF [Roseburia intestinalis L1-82]
 gi|257201814|gb|EEV00099.1| riboflavin biosynthesis protein RibF [Roseburia intestinalis L1-82]
          Length = 309

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPSIQ 78
           V+++G FDGIH GH L++E  A K        + +FN  PR ++ Q  + + T +   + 
Sbjct: 17  VLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEAKVLTTNEEKMH 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD  
Sbjct: 77  --IFEQIGIDYLVECPFTKEIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGDYH 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   +KYG+  + ID+++ +K  I SS+ +R  + KG++  A HLLGY + +  +++H
Sbjct: 134 MLKDLSDKYGYEVLVIDKMQEDKRDI-SSTFVREEIAKGNIEKANHLLGYHYFVTGEILH 192

Query: 199 GEKIGRT-LGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G  +G T LG PT N Q+ P+  +L + GVY    R  D+ SY GV N G  PT+    P
Sbjct: 193 GRHLGSTKLGIPTIN-QIPPEEKLLPESGVYVTEVRLGDR-SYRGVTNVGVKPTIEGKNP 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 251 VGVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|91227671|ref|ZP_01261948.1| hypothetical protein V12G01_13339 [Vibrio alginolyticus 12G01]
 gi|269966609|ref|ZP_06180690.1| Riboflavin biosynthesis protein [Vibrio alginolyticus 40B]
 gi|91188450|gb|EAS74744.1| hypothetical protein V12G01_13339 [Vibrio alginolyticus 12G01]
 gi|269828794|gb|EEZ83047.1| Riboflavin biosynthesis protein [Vibrio alginolyticus 40B]
          Length = 311

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/313 (36%), Positives = 163/313 (52%), Gaps = 22/313 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI      P H  G V+ IGNFDG+H GH  +L+Q  + A+  + P  V++F P P  +
Sbjct: 8   HNIN-----PRH-HGCVLTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQPMEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ GEKYGF  V      + +LR      VSS+ IR AL + 
Sbjct: 122 VGDDFCFGKGRTGNFAMLQEAGEKYGFDVVSTQSFCLQQLR------VSSTAIRQALARD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++        
Sbjct: 176 DLHSAQQMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  E LK 
Sbjct: 236 VGGVANIGQRPTV--NGVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQ 293

Query: 297 YMGEDEKKARKIL 309
            +  D + AR  L
Sbjct: 294 QIELDAEAARVWL 306


>gi|326389431|ref|ZP_08210998.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994436|gb|EGD52861.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 316

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 159/278 (57%), Gaps = 6/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +  V++      +  +VSSS IR  +  G V  A  LLG  F ++  VIH
Sbjct: 137 TLKKYSKVYSYK-VYVVPPVIREGIVVSSSYIRELIKSGKVEEANSLLGRFFPLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D++L K GVY  R + +D+  Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIEDKF-YIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALK 291


>gi|170723721|ref|YP_001751409.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida W619]
 gi|169761724|gb|ACA75040.1| riboflavin biosynthesis protein RibF [Pseudomonas putida W619]
          Length = 316

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 160/303 (52%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVIFEP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +N SA++F++ +LV+ L 
Sbjct: 57  QPREYFAPDTAPARLARLRDKVELLAGEGIDRVLCLAFNQRLSNLSADEFVEAILVDGLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G++YGF     +TV  D LR      VSS+ +R 
Sbjct: 117 VRHLEVGDDFRFGCDRAGDFTFLIEAGKQYGFTVEAANTVIQDGLR------VSSTEVRQ 170

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G+   A HLLG  ++I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 171 ALSEGNFELAEHLLGRPYSITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI 230

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E
Sbjct: 231 -DGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLE 289

Query: 293 KLK 295
            LK
Sbjct: 290 ALK 292


>gi|304320105|ref|YP_003853748.1| riboflavin biosynthesis protein RibF [Parvularcula bermudensis
           HTCC2503]
 gi|303299008|gb|ADM08607.1| riboflavin biosynthesis protein RibF [Parvularcula bermudensis
           HTCC2503]
          Length = 314

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 3   VFHN-IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
           V H  +E + + P   +G V  IGN DG+H GH  ++ +A + A  +  P+ V  F+PHP
Sbjct: 6   VLHAPLECDVAAP--YRGAVSVIGNLDGVHRGHQALIGRAKERAEAASRPLAVTVFDPHP 63

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY----SAEQFIQKVLVEW 115
           R +     P F L+    + +IL  +G    + Y F L   +Y    + E F++  L E 
Sbjct: 64  RRVFSPEGPPFLLTKLETKAEILGSLG----VDYVFVLPFNDYLRTQTPETFVRHTLAER 119

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L + T+ITGT FRFG  R+GD   L +     G     I  +    ++  SSS IR AL 
Sbjct: 120 LGLHTIITGTDFRFGAGRSGDCTALARHAAASGMQAEAISPVLAPGTEKYSSSGIRAALQ 179

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G    AA  LG  ++I   V  G ++ RTL FPTAN+ L P +  K GVYA      D 
Sbjct: 180 AGDPQKAARWLGRPWSILGTVEQGRQLARTLDFPTANISLGPYVRPKFGVYATSTLI-DG 238

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G  PT V      LE  +FD + ++YG+     F  +LRPE KF  I+ LK
Sbjct: 239 ERVPGVANIGVRPT-VDGTAEWLEVHLFDVAADLYGRALDTQFLAFLRPEQKFDGIDALK 297

Query: 296 IYMGEDEKKARKI 308
             +  D   AR I
Sbjct: 298 AQIATDGALARNI 310


>gi|307264919|ref|ZP_07546481.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306920177|gb|EFN50389.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 316

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 158/278 (56%), Gaps = 6/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDRQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGYNYRFGYKALGNVN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    I  +   +  +VSSS IR  +  G +  A  LLG  F++   VIH
Sbjct: 137 TLKKYSKIYSYKVYVIPPVIR-EGIVVSSSYIRELIKSGKIEEANSLLGRFFSLRGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D++L K GVY  R + +D+  Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIEDKF-YIAVTNVGSKPTF-GGKNIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALK 291


>gi|323485579|ref|ZP_08090923.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14163]
 gi|323692927|ref|ZP_08107149.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14673]
 gi|323401097|gb|EGA93451.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14163]
 gi|323503010|gb|EGB18850.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14673]
          Length = 315

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 5/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VV +G FDG+H GH  +L +  +  +    T V +F   P T+++        +    +E
Sbjct: 17  VVTLGKFDGLHRGHQKLLNEVFRFRDKGYKTAVFTFETAPGTLMKGKLQTMITTNAERRE 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             LEK G   L+ Y F  E A+   E+F+  +L   ++ + ++TGT FRFG  R GD  +
Sbjct: 77  N-LEKAGVDYLVEYPFNQEVAHMQPEEFVSHILCGQMKARAIVTGTDFRFGYQRKGDVEL 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    KYG+  V +D+  +   +I SS+ IR  L +G++  A  LLGY + I   VIHG
Sbjct: 136 LKSLAGKYGYEMVIVDKALDGSREI-SSTYIREELARGNIKKANELLGYTYMIHGRVIHG 194

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
             +G TLGFPT N++      L   GVY  +    D   ++G+ N GR PT+    P+ +
Sbjct: 195 RHLGTTLGFPTVNIEPREQKHLPAFGVYLSKV-VIDGNIHNGITNIGRKPTIEGKHPVGV 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E++I+D   ++Y +   V   D++RPE +F  +E LK  +  D++  R++    Y +
Sbjct: 254 ETYIYDLDADLYDKWIEVRLTDFIRPEQRFSSVEALKERVLADKEAGRRLHARPYSI 310


>gi|167040278|ref|YP_001663263.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter sp. X514]
 gi|300914362|ref|ZP_07131678.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X561]
 gi|307724402|ref|YP_003904153.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X513]
 gi|166854518|gb|ABY92927.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X514]
 gi|300889297|gb|EFK84443.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X561]
 gi|307581463|gb|ADN54862.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X513]
          Length = 316

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 159/278 (57%), Gaps = 6/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +  V++      +  +VSSS IR  +  G V  A  LLG  F ++  VIH
Sbjct: 137 TLKKYSKIYSYK-VYVVPPVIREGIVVSSSYIRELIKSGKVEEANSLLGRFFPLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D++L K GVY  R + +D+  Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIEDKF-YIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALK 291


>gi|78046845|ref|YP_363020.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78035275|emb|CAJ22920.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 350

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 168/318 (52%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +   AE F++  LV
Sbjct: 61  EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMRAEDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  +I S++ IR  
Sbjct: 114 GRLRAREVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLHGERI-SATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA      
Sbjct: 173 LGAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D ++AR++L +
Sbjct: 291 LTVQMHRDAEQAREVLAA 308


>gi|297562518|ref|YP_003681492.1| riboflavin biosynthesis protein RibF [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846966|gb|ADH68986.1| riboflavin biosynthesis protein RibF [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 315

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 169/312 (54%), Gaps = 14/312 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P+     VVA+G FDG+H GH  ILE A+        P+TV++F+PHP+T+++ ++P
Sbjct: 8   EGVPSGWGRSVVAVGVFDGVHRGHQAILETAVGHGRELGLPVTVVTFDPHPQTVLRGTTP 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + ++L + G  A+    FT + ++ + E+F+Q+VLV+ L    V+ G  FR
Sbjct: 68  P-VLTPLERRVELLTEYGADAVCVLPFTKDLSSLTPEEFVQRVLVDRLHAAAVVVGEDFR 126

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +GD   L   G +YGF    +  + +  +  ++S+ +R  L +G V  AA LLG 
Sbjct: 127 FGHRASGDVAALAALGAEYGFTADGVALVADGDT--ITSTRVRGLLAEGDVAGAAELLGR 184

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK-EGVYAIRFRTQD-----QTSYSGV 241
              +  +V+HG   GR  LGFPTANM L PD  +  +GVYA      +     ++ +   
Sbjct: 185 PHRVGGEVVHGAARGRELLGFPTANMDLLPDTAVPGDGVYAGWLHRSEPAPGQESRWPAA 244

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NPT        +E++  D    ++YG R TV F  ++R + +F  I++L + M  
Sbjct: 245 ISVGSNPTF-DGAERTVEAYALDRDDLDLYGLRMTVDFTVHIRGQERFDSIDELIVAMRR 303

Query: 301 DEKKARKILESS 312
           D  + R++L + 
Sbjct: 304 DVDRCREVLRAG 315


>gi|94987151|ref|YP_595084.1| FAD synthase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731400|emb|CAJ54763.1| FAD synthase [Lawsonia intracellularis PHE/MN1-00]
          Length = 347

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 166/309 (53%), Gaps = 18/309 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   + +GNFDG+HLGH  +L+     A    S  TV++F PHP+ ++   SP   L+  
Sbjct: 20  KKTTITLGNFDGVHLGHQALLKTIYLTAKKQQSISTVITFEPHPQAVLIGESPSL-LTTK 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K+++ MG   + +  FT   AN + EQF+Q +L+E L ++ ++ G  F  GK+R G
Sbjct: 79  KEKLKLIKSMGIDLIFQLNFTSTLANMTTEQFVQSILLERLHMEGIVLGHDFSMGKERLG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            + +L   G+  GF TV    +   K Q VSSS IR A+ +G +  A  LLG  ++I+  
Sbjct: 139 TQHVLSTLGKTMGF-TVTHQPVFTFKEQPVSSSLIREAIQEGAIEKANLLLGRCYSIDGT 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQT----------SYSGVA 242
           +IHG+K GR LGFPTAN+ LS +++   GVYA        QD T          ++  V 
Sbjct: 198 IIHGKKRGRMLGFPTANLALSSNLIPSTGVYATLVTLESNQDNTFYIPVQHQKNTFLAVT 257

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G NPT   + P  +E+ + +F  ++Y Q  T++F   LR E  F +I  L   + +D 
Sbjct: 258 NIGINPTFGDSIP-KIETHLLNFHNDLYEQHMTINFLKKLREEAIFSNISSLITQIKDDI 316

Query: 303 KKARKILES 311
            + + I ++
Sbjct: 317 SQTKTIFKN 325


>gi|325928649|ref|ZP_08189828.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas perforans
           91-118]
 gi|325540977|gb|EGD12540.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas perforans
           91-118]
          Length = 350

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 168/318 (52%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +   AE F++  LV
Sbjct: 61  EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMRAEDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  +I S++ IR  
Sbjct: 114 GRLRAREVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLHGERI-SATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA      
Sbjct: 173 LGAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D ++AR++L +
Sbjct: 291 LTVQMHRDAEQAREVLAA 308


>gi|148978531|ref|ZP_01814983.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrionales
           bacterium SWAT-3]
 gi|145962320|gb|EDK27601.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrionales
           bacterium SWAT-3]
          Length = 311

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 150/290 (51%), Gaps = 4/290 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L Q  + A     P  V++F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQEVLSQVSEQAAALGLPSVVMTFEPQPMELFARDRAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+  S L+   F    A+ SAE FI+ +LV+ L VK ++ G  F FGK R G+
Sbjct: 76  DKYVQLSKLDISRLLCVNFNQYFASLSAEAFIKDLLVDKLGVKFLVVGDDFCFGKGRTGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+  GEKYGF  V       N+ + VSS+ IR AL    +  +A +LG  ++I   V
Sbjct: 136 FAMLKDAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAVDDLAASATMLGRDYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            HG K+GRT+GFPTAN+ L   +    GVY +     D     GVAN G+ PT V     
Sbjct: 195 SHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALDIDGVPVGGVANIGQRPT-VNGARQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LE   FDF   +YG++  V     LR EIKF+  + LK  +  D + AR
Sbjct: 254 QLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFESFDALKNQIELDAEAAR 303


>gi|254230239|ref|ZP_04923630.1| riboflavin biosynthesis protein RibF [Vibrio sp. Ex25]
 gi|151937219|gb|EDN56086.1| riboflavin biosynthesis protein RibF [Vibrio sp. Ex25]
          Length = 311

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 162/310 (52%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI      P H  G V+ IGNFDG+H GH  +L+Q  + A+  + P  V++F P P  +
Sbjct: 8   HNIT-----PRH-HGCVLTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQPMEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ GEKYGF  V      + +LR      VSS+ IR AL + 
Sbjct: 122 VGDDFCFGKGRTGNFAMLQEAGEKYGFDVVSTQSFCLQQLR------VSSTAIRQALARD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++        
Sbjct: 176 DLHSAQQMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  E LK 
Sbjct: 236 VGGVANIGQRPTV--NGVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQ 293

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 294 QIELDAEAAR 303


>gi|289578382|ref|YP_003477009.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter italicus
           Ab9]
 gi|297544658|ref|YP_003676960.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528095|gb|ADD02447.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter italicus
           Ab9]
 gi|296842433|gb|ADH60949.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 316

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 170/302 (56%), Gaps = 7/302 (2%)

Query: 9   INQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS 65
           I++S  +  K   V+A+GNFDG+H+GH  +++QAI ++  NN    V +F  H   I+  
Sbjct: 4   IDESSASRCKEAKVIALGNFDGVHIGHQKLIKQAISLSKKNNLTSAVFTFKQHTSKILTP 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
             P   ++    + +IL++      I + FT   +  +AE+FI K+LVE L ++  + G 
Sbjct: 64  DKPSELITTYQKKVEILKQFNLDYGIFFDFTENFSKLTAEEFIIKILVELLNIRIAVAGY 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFG    G    L+K  + Y +  V++      +  +VSSS IR  +  G +  A  L
Sbjct: 124 NYRFGYKALGSVDTLKKYSKIYSYK-VYVVPPVIREGVVVSSSYIRELIKSGKIEKANEL 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG  F+++  VIHG++IGR LGFPTAN+Q+S D++L K GVY  R + +D+  Y  V N 
Sbjct: 183 LGRFFSLQGQVIHGQEIGRKLGFPTANLQISEDLVLPKTGVYVTRVKIEDKF-YIAVTNV 241

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT      + +ES++ D+++ +Y +   + F   +R EIKF+++E L+  + +D   
Sbjct: 242 GSKPTF-GGTNISVESYVLDYNENLYDKYLEIEFITRIRDEIKFQNVEALQQQVFKDINY 300

Query: 305 AR 306
           A+
Sbjct: 301 AK 302


>gi|260435782|ref|ZP_05789752.1| riboflavin biosynthesis protein RibF [Synechococcus sp. WH 8109]
 gi|260413656|gb|EEX06952.1| riboflavin biosynthesis protein RibF [Synechococcus sp. WH 8109]
          Length = 329

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 160/294 (54%), Gaps = 5/294 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            +A+G+FDG+H GH  ++ +AI+ + +N+  +V+SF PHPR ++   + +  L  PS + 
Sbjct: 31  ALALGSFDGLHAGHRRVIAEAIQDSPDNAVASVVSFWPHPREVLFGEARL-RLDLPSEKL 89

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   L+   FT E A  SAE F+  VL+  L+ + +  GT FRFG  R GD  +
Sbjct: 90  ALLEPLGIHQLVLVPFTRELAQLSAEDFVTSVLLNTLQARRIAVGTNFRFGHQRRGDAEM 149

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   + G     +  + + + ++ SSS IR AL +  +  A  LLG  +  +  V+ G
Sbjct: 150 LERLAARSGVEVKVVPIVEDQEGRM-SSSRIRAALDQADLTTAKSLLGRAYRFQGRVVRG 208

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLL 257
             +GR LG+PTAN+Q+     L   GVYA   +   D      V N G  PT+ P  P  
Sbjct: 209 RGLGRELGWPTANLQVDGRKALPGLGVYAAWAQLDGDDNRLPAVMNLGPQPTIDPTSPSA 268

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E  + D S E+ G++  V     LR + KF  +E+L   +G D  +AR+IL++
Sbjct: 269 VEVHLLDQSLELEGRQLGVEPVQRLRGQTKFSGLEELSSQIGRDAAQAREILQA 322


>gi|294666945|ref|ZP_06732175.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603317|gb|EFF46738.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 340

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 20/317 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSS--PIFTLSPPSIQEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLVE 114
                ++  P  TL+    + KI    GF A    +IR+   L  +   AE F++  LV 
Sbjct: 61  EFFAPAALPPRLTLA----RAKIEGLYGFGADSVGMIRFDGRL--SKMCAEDFVRLALVG 114

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + V  G +FRFG  RAGD G+L+  GE++GF    I  +  +  +I S++ IR  L
Sbjct: 115 RLCAREVWIGPEFRFGHRRAGDIGLLRTLGEQHGFVAGEIAPVHLHGERI-SATRIRELL 173

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G   +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       
Sbjct: 174 GAGEFAHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVA 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L
Sbjct: 233 ERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEAL 291

Query: 295 KIYMGEDEKKARKILES 311
            + M  D ++AR++L +
Sbjct: 292 TVQMHRDAEQAREVLAA 308


>gi|91776561|ref|YP_546317.1| riboflavin kinase / FMN adenylyltransferase [Methylobacillus
           flagellatus KT]
 gi|91710548|gb|ABE50476.1| riboflavin kinase / FMN adenylyltransferase [Methylobacillus
           flagellatus KT]
          Length = 306

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 164/297 (55%), Gaps = 12/297 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            VAIGNFDG+HLGH  +L + I++A+   +   V++F PHPR           L+  S++
Sbjct: 16  AVAIGNFDGVHLGHQALLRRLIEVASAQGLKSAVMTFEPHPREFFAPDKAPARLT--SLR 73

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+    + G   +    F    A  + E F+Q +L   L+ +T++ G  FRFG   AG 
Sbjct: 74  EKLELFAEAGVDYVYVCHFNRRFAAITVEAFMQDILRNALDARTILVGEDFRFG---AGR 130

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           +G ++    + GF+     ++ N   + VSS+ IR AL KG +  AA LLG  ++I   V
Sbjct: 131 QGSMEDFA-RAGFNLQSQPQV-NLDGKRVSSTAIREALAKGQLDEAARLLGRPYSISGKV 188

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+K+ R LG+PTAN+ +  D     G+YA++     +   + GVA+ G  PT+  +G 
Sbjct: 189 VHGDKLARELGYPTANIHMLHDRPPLFGIYAVKLEGLAEGGDWPGVASLGVRPTVKQDGK 248

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LE+ +FDFS +IYG+   V F   +R E+KF  +E LK ++  D + AR+   ++
Sbjct: 249 PTLEAHLFDFSGDIYGRHVRVKFMHKIRDEMKFDSLETLKYWIARDAEMAREYFRAN 305


>gi|270263901|ref|ZP_06192169.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           odorifera 4Rx13]
 gi|270042094|gb|EFA15190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           odorifera 4Rx13]
          Length = 312

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKQEGQRLGLPVMVMIFEPQPLEMFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  KF    A  +A+ F+ ++LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAELLVEKLGVKFLMVGDDFRFGAARQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK GE+YGF  +     R    Q +SS+ IR AL    +  A  LLG+ ++I   V
Sbjct: 136 FPLLQKAGEEYGFEVISTPTFREG-DQRISSTAIRNALRDDDLAQAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPLPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   ARK      P+
Sbjct: 254 QLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARKFFGLQTPV 312


>gi|242373564|ref|ZP_04819138.1| FAD synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348927|gb|EES40529.1| FAD synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 323

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 171/299 (57%), Gaps = 12/299 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT-LSPPSIQ 78
           +A G FDG+H GH  + +   + A  S +   V++F+PHP  ++       T L+P S +
Sbjct: 22  MAFGFFDGMHRGHDKVFQTLDRKAKESNLKKAVMTFDPHPSVVLNPERKRTTYLTPLSDK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++ +      I   F+   AN ++E FIQ+ ++    VK VI G  F FGK   G+  
Sbjct: 82  LEMIAQHDIDYCIVINFSSRFANVTSEAFIQEYVINN-HVKEVIAGFDFTFGKFGKGNMT 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+  E   F+T  + + +   S+ +S++ IR ALT+G++  A   LGY + I+  V+ 
Sbjct: 141 VLQESEE---FNTTIVGK-QEMGSEKISTTAIREALTEGNLRKANEALGYLYRIKGTVVQ 196

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTM--VPNG 254
           GEK GRT+GFPTAN+Q + D +L K+GVYA+      ++  Y GVAN G  PT       
Sbjct: 197 GEKRGRTIGFPTANVQPNDDYVLPKKGVYAVSMEIGPESKLYRGVANVGVKPTFHDPAKA 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +++E  IFDF + IYG+R TV +  +LRPE+KF+ I+ L   M ED+ KA+ +L   +
Sbjct: 257 EVVIEVNIFDFDENIYGERVTVYWHHFLRPEVKFEGIDPLVEQMNEDKAKAKYLLSVDF 315


>gi|56460237|ref|YP_155518.1| FAD synthase [Idiomarina loihiensis L2TR]
 gi|56179247|gb|AAV81969.1| FAD synthase [Idiomarina loihiensis L2TR]
          Length = 312

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/295 (37%), Positives = 161/295 (54%), Gaps = 7/295 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L Q  + A     P  V++F P P+ + Q       L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQAVLSQVREKAQQLGMPSAVMTFEPQPQELFQPEKAPARLTNWR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L+       I  +F  + A+  A +FI++ LV  L VK ++ G  FRFG  R GD
Sbjct: 76  EKYLALQAQNVDRHIVVEFNKKFASQPAREFIEQTLVGKLGVKFLVVGDDFRFGYKREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G++ GF  V     R  + Q VSS+ IR AL +G    A  +LG  + I   V
Sbjct: 136 FELLQKAGKELGFEVVDTRSYRQQQ-QRVSSTAIRQALEEGDFEQAEQMLGRPYQICGKV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNG- 254
           +HG K GRT+GFPTAN+ L        GV+A+  +  +D+  +SGVAN G  PT+  NG 
Sbjct: 195 VHGRKNGRTIGFPTANVPLKRLKSPLHGVFAVTAQFGKDEEIHSGVANLGTRPTL--NGD 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + LE  +F+FS  +YGQ+ TV+    LR E +F  ++ L+  + +D  +AR+ L
Sbjct: 253 EVQLEVHLFEFSGNLYGQQMTVTPVAKLRNEQRFASLQHLQEQIEKDAARAREAL 307


>gi|326791494|ref|YP_004309315.1| riboflavin biosynthesis protein RibF [Clostridium lentocellum DSM
           5427]
 gi|326542258|gb|ADZ84117.1| riboflavin biosynthesis protein RibF [Clostridium lentocellum DSM
           5427]
          Length = 325

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 168/303 (55%), Gaps = 7/303 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV +GNFDG+H GH  + + A     AN     V SF PHP  +I  +     +S    +
Sbjct: 27  VVVLGNFDGVHKGHQRLFQVAKDRAKANGLRTVVFSFYPHPTWVIGDNRKALIMSRRD-K 85

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++++ +MG   LI Y FT   A  S E F   +L++ L+ K ++ G+ + FGK + G+  
Sbjct: 86  KQVIGEMGIDELIEYPFTRTFAAISPETFFVDILMKRLKAKILVVGSNYYFGKGKTGNPK 145

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++ GEKY      +D ++   S  +SSS+IR  + +G++  A  +LG+ + I  +V+ 
Sbjct: 146 YLRQLGEKYNIEVCIVDAVKIGGSM-ISSSSIRKLILEGNIEKANEMLGHPYMIVGNVVQ 204

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GRT+GFPT N+   PD +    GVYA   R   +T Y G+ N G NPT V     +
Sbjct: 205 GKQLGRTIGFPTINLIADPDRVYPPNGVYATVVRVYSKT-YRGMTNIGVNPT-VSGQRKM 262

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E+ IF++  +IYG+   V F+ Y+RPE KFKDI  LK  + +D+   ++   +   L  
Sbjct: 263 IETHIFNYDADIYGEAVEVYFYHYVRPEQKFKDINALKAQIQQDKWHVQEFFANPINLFA 322

Query: 318 RDR 320
            D+
Sbjct: 323 NDK 325


>gi|27467867|ref|NP_764504.1| FAD synthase RibC [Staphylococcus epidermidis ATCC 12228]
 gi|57866762|ref|YP_188421.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           RP62A]
 gi|251810703|ref|ZP_04825176.1| FAD synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876296|ref|ZP_06285163.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           SK135]
 gi|293366764|ref|ZP_06613440.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315412|gb|AAO04546.1|AE016747_43 riboflavin kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57637420|gb|AAW54208.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           RP62A]
 gi|251805863|gb|EES58520.1| FAD synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295321|gb|EFA87848.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           SK135]
 gi|291319065|gb|EFE59435.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329724337|gb|EGG60849.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU144]
 gi|329736363|gb|EGG72635.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU028]
 gi|329736643|gb|EGG72909.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU045]
          Length = 323

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 177/316 (56%), Gaps = 15/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +   + A    +   V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + +++ + G    I   F+   AN +++ FI+  ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFANVTSDDFIKNYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ   E   F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---ESKAFNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPTRAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   M ED+ +A+ +L
Sbjct: 296 LVKQMNEDKAQAKHLL 311


>gi|78358544|ref|YP_389993.1| riboflavin kinase / FMN adenylyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78220949|gb|ABB40298.1| riboflavin kinase / FMN adenylyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 314

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 9/306 (2%)

Query: 11  QSLPNHLKGG-VVAIGNFDGIHLGHH-LILEQAIKIANNS-PITVLSFNPHP-RTIIQSS 66
           Q +   L GG  V IGNFDG+H GH  LI     K A  S P  V++F PHP R ++   
Sbjct: 8   QEITLDLSGGSCVTIGNFDGVHNGHRKLIGRMMAKAAKASLPGVVVTFCPHPLRVLVGPH 67

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +P F ++    +  +LE +G    +  +FT E A    E+F++ +LV+ L VK ++ G  
Sbjct: 68  TPPF-ITDYEKKLDLLEALGVDLTLMLQFTRELAALEPEEFVRSILVDGLNVKELVVGYD 126

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           + FGK R G   +L + GEKYGF    +D +  + + +VSS+ IR  +  G V     L+
Sbjct: 127 YSFGKGRKGHFELLVELGEKYGFSCERLDPVIIDGA-VVSSTRIRDMIKAGDVWGVRPLM 185

Query: 187 GYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
              + +   V+HG+K  GR LGFPTAN+++  +++   GVYA+     D   Y GV N G
Sbjct: 186 DRFYVVRGTVVHGKKRGGRLLGFPTANLEVRDELVPGPGVYAVWVEV-DGNLYKGVTNIG 244

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT   N  L +E++I DF ++IYG    ++F   LR E KF  ++ L   +  D +  
Sbjct: 245 YNPTF-GNETLSVETYIMDFDRDIYGWELRLNFVHRLRDERKFSGLDDLMTQIRSDVELG 303

Query: 306 RKILES 311
           R+IL+S
Sbjct: 304 RQILDS 309


>gi|300113749|ref|YP_003760324.1| riboflavin biosynthesis protein RibF [Nitrosococcus watsonii C-113]
 gi|299539686|gb|ADJ28003.1| riboflavin biosynthesis protein RibF [Nitrosococcus watsonii C-113]
          Length = 310

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 154/296 (52%), Gaps = 4/296 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ-AIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           + GV  IGNFDG+HLGH  +L Q A K A    P  +++F P P   +  +     L+  
Sbjct: 16  QSGVATIGNFDGLHLGHQAVLRQLAAKAAELQQPSLLITFEPSPSEFLAPAKAPARLTQF 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G  F FG+DR G
Sbjct: 76  REKFEILRAQPVDWMLCLRFNSLLARMEATDFIRIVLVEKLNLRYLVAGKDFCFGRDRRG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +LQ+ G+ YGF    +  L   K++I SS+ +R AL +G++  A  LLG  + +   
Sbjct: 136 NLTLLQRAGKYYGFEVAPMPALCLEKARI-SSTRVRQALAQGNLSRAEQLLGRPYRMSGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+K GRTLGFPTAN+ L        GV+A+     D     GVAN G  PT +    
Sbjct: 195 VIQGDKRGRTLGFPTANIALRRHRTPLTGVFAVEVYGLDYKPLPGVANVGVRPT-IGGHR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE  + DF ++IYG    V F   LRPE +F+ +  L   +  D  +ARK   S
Sbjct: 254 ALLEVHLLDFERDIYGCYLQVDFLRQLRPEKRFESLAALGQQIERDCNRARKFFTS 309


>gi|209525276|ref|ZP_03273818.1| riboflavin biosynthesis protein RibF [Arthrospira maxima CS-328]
 gi|209494291|gb|EDZ94604.1| riboflavin biosynthesis protein RibF [Arthrospira maxima CS-328]
          Length = 339

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 166/320 (51%), Gaps = 32/320 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI---KIANNS------------PI------TVLSFNPHP 59
            VA+GNFDG H GH  ++   +   ++A +S            P       TV++FNPHP
Sbjct: 15  AVALGNFDGFHRGHQQVVRPILNPNQVAVDSQKVGGGYSETTPPFGISGYGTVVTFNPHP 74

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +      +    L+P   + +IL + G   L+   F  + A+ +  QF++++LVE+L+  
Sbjct: 75  QEFFTGQTKKL-LTPLPEKIEILRRFGVQQLVLLPFDKDLASLTPTQFVEQILVEYLQAT 133

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  FRFG+ R G    L+    +YG     +          +SSS IR +LT+GH+
Sbjct: 134 RVSVGFDFRFGRHRMGSTDDLKAIASQYGIDVEIVSRFPCPYGDRISSSIIRESLTEGHL 193

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSY 238
             A  LLG  +T+  +V+ G+++GRTLGFPTAN+QL P+  L + GVYA+   T     Y
Sbjct: 194 NRANQLLGRAYTLLGEVVQGQQLGRTLGFPTANLQLPPEKFLPRYGVYAV-LVTGLAARY 252

Query: 239 S-------GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                   GV N G  PT+  + P  +E  + D+  ++YGQ  TVS   +LRPE KF  +
Sbjct: 253 GKTIAPQLGVMNIGCRPTVAGDNP-TVEVHLLDWDGDLYGQSLTVSLEGFLRPEQKFASL 311

Query: 292 EKLKIYMGEDEKKARKILES 311
           E+LK  +  D   AR  L++
Sbjct: 312 EQLKAQIQRDCTHARTYLQA 331


>gi|322834474|ref|YP_004214501.1| riboflavin biosynthesis protein RibF [Rahnella sp. Y9602]
 gi|321169675|gb|ADW75374.1| riboflavin biosynthesis protein RibF [Rahnella sp. Y9602]
          Length = 312

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 154/292 (52%), Gaps = 6/292 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           G V+ IGNFDG+H GH  ++EQ +K+       P+ V+ F P P  +         L+  
Sbjct: 16  GCVLTIGNFDGVHRGHQALIEQ-LKLEGQRLGLPVMVMIFEPQPLELFAGDKAPARLTSL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L + G   L+  +F    A + A+ FI ++LVE L VK +  G  FRFG  R G
Sbjct: 75  RDKAKYLAECGVDYLLCVRFEPRFAAHMAQAFISQLLVEKLGVKFLTVGDDFRFGASRLG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK GE+YGF  +     R  +++I SS+ IR AL    +  A +LLG+ F+I   
Sbjct: 135 DFELLQKAGEEYGFEVISTQTFREGENRI-SSTAIRNALRDDDLALAENLLGHPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+K+GRT+GFPTAN+ L   +    GVYA+           GVAN G  PT V    
Sbjct: 194 VVHGDKLGRTIGFPTANVPLKRVVSPVRGVYAVEVLGLGPEPLPGVANIGIRPT-VGGVR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V     LR E +F  ++ LK  +  DE  AR+
Sbjct: 253 KQLEVHLLDTTLDLYGRHIDVVLRAKLRNEQRFSSLDALKQQIANDEVTARE 304


>gi|319401438|gb|EFV89648.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           FRI909]
          Length = 323

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 177/316 (56%), Gaps = 15/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +   + A    +   V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + +++ + G    I   F+   A+ +++ FI+  ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFASVTSDDFIKNYIINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ   E   F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---ESKAFNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPARAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   M ED+ KA+ +L
Sbjct: 296 LVKQMNEDKAKAKHLL 311


>gi|323342020|ref|ZP_08082253.1| riboflavin biosynthesis protein RibF [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464445|gb|EFY09638.1| riboflavin biosynthesis protein RibF [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 312

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 9/294 (3%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            IG FDG+H GH +++ +A KI    N    +++F+P P T+I + S +  L+P   + +
Sbjct: 22  CIGYFDGLHRGHQILINEAKKIGQEFNYETALITFDPDPWTVIHNKSHVKHLTPIKEKVR 81

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I E +G   LI  +FT + +  S  +FI+K+LV  L VKT+I G  ++FG    G    L
Sbjct: 82  IAESLGIDYLITIEFTKDLSKLSPLEFIEKILVP-LNVKTLICGADYKFGYRGEGSVDDL 140

Query: 141 QKRGEKY-GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           +  G  Y   H V +D +   K   + ++ I  A+  G V  A  LLG  ++I   V+ G
Sbjct: 141 EALGHYYFDTHVVPLDHVNEQK---IGTTAITQAILNGDVQQANDLLGRLYSISGFVVGG 197

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +  GR +GFPTANM +  + ++ K+GVYA  F     T Y  V N G NPT      L L
Sbjct: 198 QHRGREIGFPTANMDVVDEYVIPKQGVYA-GFVEVKGTMYQSVINIGHNPTFNTTEHLSL 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           E++I DF ++IYG+    SF   LR E+KF  IE L   M  D K+AR IL+ +
Sbjct: 257 ETYILDFDEDIYGEVIKQSFVKRLRDELKFDSIETLVEQMHRDVKEARLILDET 310


>gi|66043974|ref|YP_233815.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae B728a]
 gi|63254681|gb|AAY35777.1| Riboflavin kinase / FAD synthetase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 314

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 13  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 65  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 125 HLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQTVEIDGIR------VSSTKVRKAL 178

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 179 AASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDI-D 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 238 GKTWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 297

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 298 KTAINADVAAAR 309


>gi|330954238|gb|EGH54498.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae Cit 7]
          Length = 308

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 232 GKAWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|59711073|ref|YP_203849.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           fischeri ES114]
 gi|59479174|gb|AAW84961.1| bifunctional riboflavin kinase/FAD synthetase [Vibrio fischeri
           ES114]
          Length = 310

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 157/304 (51%), Gaps = 10/304 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI      P+H KG V+ IGNFDG+HLGH  +L+Q    A     P  V++F P P   
Sbjct: 8   HNIT-----PDH-KGCVMTIGNFDGVHLGHQQVLQQVKSKAKELGLPSVVMTFEPQPMEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L+K+    L+   F  + A  SA++F++ +LV  L+VK ++
Sbjct: 62  FAKEKAPARLTRLRDKFVQLKKLEIERLLCINFNQKFAEQSADEFVEDLLVRLLDVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R G+  +LQ+ G+K+GF  V        + Q VSS+ IR+AL    + + 
Sbjct: 122 VGDDFCFGKHRKGNFAMLQEAGKKHGFEVVNTQSF-CLQQQRVSSTAIRSALLHNKLDDV 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +        GVA
Sbjct: 181 ATMLGRHYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSKGKQLGGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE   FD+   +YGQ+  V     LR E KF+  + LK  +  D 
Sbjct: 241 NIGHRPT-VNGARQQLEVHFFDYKGNLYGQQLDVELLYKLRDEHKFESFDALKQQIELDS 299

Query: 303 KKAR 306
           + AR
Sbjct: 300 QAAR 303


>gi|257487503|ref|ZP_05641544.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289625176|ref|ZP_06458130.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289651360|ref|ZP_06482703.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|320326229|gb|EFW82283.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320330653|gb|EFW86630.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330869172|gb|EGH03881.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330881362|gb|EGH15511.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330988786|gb|EGH86889.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331008750|gb|EGH88806.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 308

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AASDFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 232 GKTWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|188575771|ref|YP_001912700.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188520223|gb|ACD58168.1| riboflavin biosynthesis protein RibF [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 320

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 19/301 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
           +V IG FDG+HLGH  +++ A+  A   + P   +SF P PR     ++P     PP + 
Sbjct: 1   MVCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLPREFFAPAAP-----PPRLT 55

Query: 78  --QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             + KI    GF A    +IR+   L  +  SAE F+   LV  L  + V  G +FRFG 
Sbjct: 56  LARAKIEGLYGFGADSVGMIRFDGRL--SKMSAEDFVHLALVGRLCAREVWIGPEFRFGH 113

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R GD G+L   GE++GF    I  +  +  +I S++ IR  L  G   +A  LLG  + 
Sbjct: 114 RRGGDIGLLHTLGEQHGFVAGEIAPVHLHGERI-SATRIRELLVAGEFAHAGDLLGRPYA 172

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+ G+++GRTLG+PTAN++  P      G+YA       +T +  V++FG  PT+ 
Sbjct: 173 IGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAETPWPSVSSFGTRPTVA 231

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M  D ++AR +L +
Sbjct: 232 GVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMHRDAEQARAVLAA 290

Query: 312 S 312
           S
Sbjct: 291 S 291


>gi|260910881|ref|ZP_05917524.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634989|gb|EEX53036.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 304

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 166/297 (55%), Gaps = 7/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  +++   ++A    ++  V++F  HPR ++Q+S     LS P  +
Sbjct: 10  VATIGFFDGVHLGHRYLIDHVRQLAQAQGMSSKVVTFGTHPRQVVQTSFVPKLLSTPEEK 69

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+L + G    +   F L  A  +A +F+Q++L E L V  ++ G   +FG +R     
Sbjct: 70  LKLLHETGIDHTMVLNFDLNMAALTAREFMQRILKERLNVAQLVIGYDNKFGHNREESFE 129

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++ G+  G H V   +   + + I SSS IR  L +G V  A  LLGY +++   V+ 
Sbjct: 130 DYRRHGQAMGIHVVEASQFAPDGAHI-SSSAIRNHLLEGRVKQANALLGYNYSLGGKVVP 188

Query: 199 GEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           G + GR +GFPTAN+ + +P  LL + GVYA     +  +    G+ N G  PT    G 
Sbjct: 189 GFQEGRKMGFPTANLLVENPQKLLPQNGVYATLVEVEGYEHPLMGMTNIGNRPTFNGKG- 247

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +E+ I DFS +IYGQ   V+F + +R E+KF  I++LK  M EDE+ AR++++++
Sbjct: 248 VTIETNILDFSADIYGQNMRVAFVERIRAEVKFSTIDELKAKMKEDEEAARQLIQNT 304


>gi|303325604|ref|ZP_07356047.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. 3_1_syn3]
 gi|302863520|gb|EFL86451.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. 3_1_syn3]
          Length = 311

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 175/320 (54%), Gaps = 22/320 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M + H+++   SL     G  V IGNFDG+H GH  ++ + + +     +   +++F PH
Sbjct: 5   MQLVHSVDGLGSL----TGASVTIGNFDGVHKGHQALIRRTLDVCRQDDLACVLVTFWPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++    P   L+    + ++L  +G   ++   FT E A  + E+F+++ L+  + +
Sbjct: 61  PRLVVSPHKPHAPLTSRERRLELLAGLGVEHVLELPFTQELAALTPEEFVRRYLLP-MHL 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTA 173
           + ++ G  F  G+ R+G   +L+  G  +GF       V +D+       +VSS+ +R  
Sbjct: 120 RRLVVGYDFSLGRGRSGHAEVLRSLGADWGFAVEQLPPVIVDD------AVVSSTRLRDL 173

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT 232
           +++G V  AA LLG  +    +V+HGE  G  LGFPTAN+ L P+ LL  EGVYA R R 
Sbjct: 174 ISRGDVWQAARLLGRCYGFSGEVVHGEGRGGGLGFPTANL-LPPETLLPAEGVYAARVRL 232

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D+T +  V N GR PT      + +ESF+ D S ++YG+R  + F   LR E +F  +E
Sbjct: 233 -DETWHQAVTNVGRKPTF-GGRDVTVESFLLDTSADLYGRRVRLEFVARLRGERRFASVE 290

Query: 293 KLKIYMGEDEKKARKILESS 312
           +L   +GED  +AR+ILE +
Sbjct: 291 ELTRRIGEDVAEARRILEKA 310


>gi|71735847|ref|YP_273012.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71556400|gb|AAZ35611.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 344

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 43  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 94

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 95  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 154

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 155 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 208

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 209 AASDFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 267

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 268 GKTWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 327

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 328 KTAINADVAAAR 339


>gi|329114392|ref|ZP_08243154.1| Riboflavin biosynthesis protein RibF [Acetobacter pomorum DM001]
 gi|326696468|gb|EGE48147.1| Riboflavin biosynthesis protein RibF [Acetobacter pomorum DM001]
          Length = 315

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 157/301 (52%), Gaps = 1/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P    G   A+GNFDG+HLGH  ++        + P+ V++F PHPR + +   P F
Sbjct: 11  RDIPPEAHGCAAALGNFDGVHLGHAHLVHSTHAARPDLPLAVVTFEPHPRELFRPQDPPF 70

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS P  +   L+ +G   + +  F    +  +AE+F++ VL + L ++ V  G  F FG
Sbjct: 71  RLSLPDERFAALQALGVQHVFQIGFDEAFSRMTAERFVEDVLHDALCLRHVACGPDFAFG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   L +R  + G     +  L  + +   SS+ IR  L +G+   A   LG  +
Sbjct: 131 YRRGGDVTFLAERTGELGMGFTSVPAL-ADAAGPYSSTRIRRLLQEGYPERATEELGRPW 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V HG+K GR LGFPTAN+ L   +    GVYA+  R     +  GVAN GR PT+
Sbjct: 190 FIRGQVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVTVRLPGGYTRPGVANIGRRPTI 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E  +FDF  ++YGQ  +V+    LRPE +F  +++LK  + +D ++AR +L 
Sbjct: 250 NDGQESRVEVNLFDFDGDLYGQTLSVALHKMLRPEQRFAGLDELKAQIAQDAQQARMVLN 309

Query: 311 S 311
           +
Sbjct: 310 A 310


>gi|225027054|ref|ZP_03716246.1| hypothetical protein EUBHAL_01310 [Eubacterium hallii DSM 3353]
 gi|224955518|gb|EEG36727.1| hypothetical protein EUBHAL_01310 [Eubacterium hallii DSM 3353]
          Length = 309

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 162/288 (56%), Gaps = 4/288 (1%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSP 74
           H K   VA+G F+GIH GH L++++  K   +   +V+ +F+   R  +   +    +  
Sbjct: 10  HFKDTAVALGKFEGIHRGHQLLMDEVKKQELHGLRSVVFTFDRPTRLTLTGDTEYKQIYT 69

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + +ILEK G   LI + FT E A  + ++FI++VLVE +  K ++ GT F FGK+R+
Sbjct: 70  KKERREILEKRGIDILIEHPFTKEFAALTPDRFIREVLVEKVGAKVIVVGTDFHFGKNRS 129

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+K  E+ G+H + +++L+ N   I SS+ IR +L KG +  A  LLG  +++  
Sbjct: 130 GSITDLEKLEEECGYHLIVVEKLQLNGKDI-SSTRIRASLEKGAMEEAKALLGRNYSVSG 188

Query: 195 DVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           +++HG  +GRT+  PT N Q+ S  +L   GVY  +   +D+  Y G+ N G  PT+   
Sbjct: 189 EILHGNALGRTIQVPTINQQVPSFKLLPPNGVYVSKIHWKDEV-YYGITNIGTKPTVNNT 247

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
               +E+ IFDF++++YG+   V    Y R E +F  +E L+  + +D
Sbjct: 248 SEKTVETNIFDFNKDVYGEEMVVELLHYHRKETRFSSVEALQAQLFQD 295


>gi|325286674|ref|YP_004262464.1| riboflavin biosynthesis protein RibF [Cellulophaga lytica DSM 7489]
 gi|324322128|gb|ADY29593.1| riboflavin biosynthesis protein RibF [Cellulophaga lytica DSM 7489]
          Length = 309

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 163/295 (55%), Gaps = 11/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+H+GH  ILE+ I  A    I  TVL+F PHPR ++Q  S I  L+    +
Sbjct: 17  VITIGTFDGVHIGHKKILERLINSAKLLEIESTVLTFFPHPRMVLQQDSNIKLLNTIEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E IL  +G   LI + F+ E +  SA +F++ +LV  L  K +I G   RFG++R  D  
Sbjct: 77  EMILSNLGLDFLIIHPFSKEFSRLSAIEFVRDILVNKLNTKKIIIGYDHRFGRNRNADIN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            L+  G  + F+   ++E+   +     VSS+ IR AL +G V  A   LGY + +   V
Sbjct: 137 DLKNYGTTFDFN---VEEITAQEIDDVSVSSTKIRKALAEGDVSKANSYLGYNYMLTGIV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
             G+ +GR L FPTAN+ +  +  L  K GVY ++ +  + T + G+ N G NPT V   
Sbjct: 194 TKGKGLGRQLNFPTANIYIKEEYKLIPKNGVYVVKAKLNNSTVF-GMMNIGYNPT-VNGT 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E   F+F+ ++YG++  V   + +R E+KF  I  LK+ + +D++ A  ++
Sbjct: 252 EKTIEVNFFNFNDDLYGKKIQVDILERIRDEVKFDSINDLKVQLTKDQETATSLI 306


>gi|150016090|ref|YP_001308344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           beijerinckii NCIMB 8052]
 gi|149902555|gb|ABR33388.1| riboflavin biosynthesis protein RibF [Clostridium beijerinckii
           NCIMB 8052]
          Length = 311

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 164/288 (56%), Gaps = 7/288 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++ + +++A  N     V +F  HPRT+I   + +  L     + 
Sbjct: 18  IALGSFDGLHIGHLSLINKVVEVAKKNKGRSMVFTFKNHPRTLINKENSVKLLMDNERKA 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           KILEK     +   +F LE    + ++FI+ ++V +  +K  + G  ++FG    G+  +
Sbjct: 78  KILEKHKVDIVCFKEFDLEFMKMTPKEFIEFLIVNY-NIKGFVVGFNYKFGYKNLGNVEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   +YG+    +D  R   + +VSS+ IR A+  G V  A  +L   +T+  ++IHG
Sbjct: 137 LRELQNEYGYELYVMDP-RTYNNDVVSSTRIRKAIQDGEVSEANKMLSMPYTLSGEIIHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +KIGRT+GFPTAN++   + +L K GVY    +  +   Y G+ + G NPT V    L +
Sbjct: 196 KKIGRTIGFPTANLKYDENFILPKIGVYYTNVKVNNNI-YKGITSVGYNPT-VEGKNLTV 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           E++I DF++EIYG +  VSF   +R E KF  +E+LK  +  D+  A+
Sbjct: 254 ETYILDFNKEIYGDKIDVSFIKKIRDEEKFNSLEELKDQLESDKAFAK 301


>gi|255535431|ref|YP_003095802.1| FMN adenylyltransferase [Flavobacteriaceae bacterium 3519-10]
 gi|255341627|gb|ACU07740.1| Riboflavin kinase [Flavobacteriaceae bacterium 3519-10]
          Length = 306

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 167/287 (58%), Gaps = 8/287 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN--PHPRTIIQSSSPIFTLSPPSIQ 78
            ++IG FDG+H GH  I      IA    +   +F   PHPR +   +  +  L+    +
Sbjct: 17  ALSIGMFDGVHRGHQSIFSNLKSIAAQKGLKTAAFTFWPHPRKVFNPADDLKLLNTIDEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ++ K G  +L   +F  +  N S E+F++++LVE L VK +I G    FGK+++GD  
Sbjct: 77  TYLISKNGVESLFLKEFDEDFRNLSGEEFVRQILVEKLNVKYLIIGYDHTFGKNKSGDFS 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K   +  F    ++ +  +   I SS+ IR AL +G V  A  +LGY +++   V+H
Sbjct: 137 LLKKLSSELNFEVEQVEAVDFHDKHI-SSTQIRNALAEGDVKEANDMLGYVYSVAGKVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PL 256
           G+KIGRT+G+PTAN+++    LL K+G Y +    ++ + Y G+ + G NPT+  NG  +
Sbjct: 196 GKKIGRTIGYPTANLEVDAIKLLPKKGAYIVDVFVKN-SRYKGMLSIGTNPTV--NGETI 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            +E +I  FS++IYG+  +V+F ++L  EIKF+++EKL   + ED++
Sbjct: 253 TVEVYILGFSEDIYGEDISVNFREFLHEEIKFENLEKLIERLDEDKR 299


>gi|104783647|ref|YP_610145.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           entomophila L48]
 gi|95112634|emb|CAK17362.1| riboflavin biosynthesis protein RibF [Pseudomonas entomophila L48]
          Length = 316

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 156/299 (52%), Gaps = 20/299 (6%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRT 61
            HN+      P H +G V  IGNFDG+H GH  IL +  +   A   P  V+ F P PR 
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQPRE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                +    L+    + ++L   G   ++   F    +  SA +F++++LV+ L V+ +
Sbjct: 61  YFAPDTAPARLARLRDKVELLAGEGIDRVLCLAFNQRLSKLSACEFVEQILVDGLGVRHL 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTK 176
             G  FRFG DRAGD G L + G+++GF     +TV  D LR      VSS+ +R AL  
Sbjct: 121 EVGDDFRFGCDRAGDFGFLIESGKQHGFTVEAANTVIQDGLR------VSSTEVRKALAD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G    AAHLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  
Sbjct: 175 GDFELAAHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI-DGK 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           ++ GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E LK
Sbjct: 234 AWPGVGNIGVRPTVSGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|254434309|ref|ZP_05047817.1| riboflavin biosynthesis protein RibF [Nitrosococcus oceani AFC27]
 gi|207090642|gb|EDZ67913.1| riboflavin biosynthesis protein RibF [Nitrosococcus oceani AFC27]
          Length = 325

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 156/302 (51%), Gaps = 4/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQ-AIKIAN-NSPITVLSFNPHPRTIIQSSSPI 69
           +L +H + GV  IGNFDG+HLGH  +L Q A K A    P  +++F P P   +  +   
Sbjct: 25  NLQSHQQSGVATIGNFDGLHLGHQAVLRQLAAKAAELQRPSLLITFEPPPSEFLAPAKAP 84

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G  F F
Sbjct: 85  ARLTQFREKFEILRAQPVDWMLCLRFNSFLARMEAADFIRMVLVERLRLRYLVAGKDFCF 144

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+DR G+  +LQ+ G+ YGF    +  L    ++ VSS+ IR AL +G++  A  LLG  
Sbjct: 145 GRDRRGNLTLLQRAGKYYGFEVAPMPALCVEGAR-VSSTRIRQALAQGNLSRAEQLLGRP 203

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +   VI G+K GRTLGFPTAN+ L    +   GV+A+     D     GVAN G  PT
Sbjct: 204 YRMSGRVIQGDKRGRTLGFPTANIALRRHRMPLTGVFAVEVYGLDNEPLPGVANVGVRPT 263

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +     LLE  + DF ++IYG+   V F   LRPE  F+ +  L   +  D   AR   
Sbjct: 264 -IGGRRALLEVHLLDFERDIYGRYLQVDFLRQLRPEKCFESLAALGQQIERDCGVARDFF 322

Query: 310 ES 311
            S
Sbjct: 323 TS 324


>gi|330831174|ref|YP_004394126.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas veronii B565]
 gi|328806310|gb|AEB51509.1| Riboflavin kinase/FMN adenylyltransferase [Aeromonas veronii B565]
          Length = 324

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 164/306 (53%), Gaps = 15/306 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPR 60
           HN++     P H +G V+ IGNFDG+H GHH +L    E+A ++    P  V+ F P P 
Sbjct: 8   HNLK-----PRH-RGCVLTIGNFDGVHQGHHAVLARLKEKAAQL--GLPACVMLFEPQPL 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   ++    LS    + + L+ +    ++  +F+   A  +A  FI+++LVE L V+ 
Sbjct: 60  ELFAGTAAPARLSRLREKYEALQGLHIDRMLCVRFSHRFAEQAASTFIEQLLVERLGVRY 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  FRFGK R GD  +L++ G ++GF  +     + ++ Q VSS+ +R AL  G + 
Sbjct: 120 LVVGDDFRFGKGREGDFHLLEEAGHRFGFEVISTQSFQLSR-QRVSSTLVREALKAGRMA 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
               +LG  + I   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T + G
Sbjct: 179 EVELMLGRPYAISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVICSGKT-FPG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  PT+       LE  +FDFS ++YGQ+  V     LR E KF     LK  +  
Sbjct: 238 VANVGVRPTL-SGTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFDSFSALKEQIER 296

Query: 301 DEKKAR 306
           D   AR
Sbjct: 297 DALAAR 302


>gi|327404079|ref|YP_004344917.1| riboflavin biosynthesis protein RibF [Fluviicola taffensis DSM
           16823]
 gi|327319587|gb|AEA44079.1| riboflavin biosynthesis protein RibF [Fluviicola taffensis DSM
           16823]
          Length = 312

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 166/302 (54%), Gaps = 19/302 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ +G +DG+HLGH  I+   ++ A   N    + +F+PHPR ++   S    L   ++ 
Sbjct: 17  ILTLGTYDGVHLGHQEIIRSLVEKARTENKESVLFTFDPHPRKVLYPESYSVKL-IDTVD 75

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L+++G   +I + FT E +  SA +F++ VLV  + V  +  G    FGK+R G 
Sbjct: 76  EKLEKLKELGLDTVILFPFTKEFSRLSAMEFVRDVLVNQIGVSEMHIGHDHHFGKNREGS 135

Query: 137 RGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              LQ+ GE Y F       +F++E        +SS+ IR A+  G+V  A  LLG  F 
Sbjct: 136 FQELQELGELYDFSVFQLPAIFLEE------TAISSTKIRNAILDGNVEYANQLLGSSFV 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           ++  V+ G++IGRT+GFPTAN+ L  +  I+ K GVYA +     + SY  V N G  PT
Sbjct: 190 LQGKVVKGQQIGRTIGFPTANIDLDNTEKIVPKNGVYAAQVHIGSK-SYHAVMNIGTRPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  NG + +E ++FDF+++IY Q   V     +R E +F++IE LK  +  DE  AR   
Sbjct: 249 IANNGSVTIEVYLFDFNEDIYDQFIKVEVKQRIRDEQRFENIEDLKNQIQLDEISARNYF 308

Query: 310 ES 311
            S
Sbjct: 309 SS 310


>gi|223044233|ref|ZP_03614270.1| riboflavin biosynthesis protein RibF [Staphylococcus capitis SK14]
 gi|222442383|gb|EEE48491.1| riboflavin biosynthesis protein RibF [Staphylococcus capitis SK14]
          Length = 323

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 180/320 (56%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           + V H I+ +Q +  ++    +A G FDG+H GH  + +   + A  NN    V++F+PH
Sbjct: 4   IEVTHPIQKDQLINENV---AMAFGFFDGMHRGHDKVFQALNQKAEENNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + +++E       I   F+   A+ ++E+FIQ+ ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIEHHDVDYCIVINFSSRFASVTSEEFIQEYVINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+  +   F T  + + +   S+ +S++ IR ALT+G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESND---FKTTIVGK-QELDSEKISTTAIREALTEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++
Sbjct: 176 NLRKANEELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVTVYWHYFLRPEVKFSGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ +A+ +L   +
Sbjct: 296 LVEQMNEDKDQAKYLLSVDF 315


>gi|77165500|ref|YP_344025.1| FMN adenylyltransferase, riboflavin kinase [Nitrosococcus oceani
           ATCC 19707]
 gi|76883814|gb|ABA58495.1| FMN adenylyltransferase [Nitrosococcus oceani ATCC 19707]
          Length = 310

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 156/302 (51%), Gaps = 4/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQ-AIKIAN-NSPITVLSFNPHPRTIIQSSSPI 69
           +L +H + GV  IGNFDG+HLGH  +L Q A K A    P  +++F P P   +  +   
Sbjct: 10  NLQSHQQSGVATIGNFDGLHLGHQAVLRQLAAKAAELQRPSLLITFEPPPSEFLAPAKAP 69

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G  F F
Sbjct: 70  ARLTQFREKFEILRAQPVDWMLCLRFNSFLARMEAADFIRMVLVERLRLRYLVAGKDFCF 129

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+DR G+  +LQ+ G+ YGF    +  L    ++ VSS+ IR AL +G++  A  LLG  
Sbjct: 130 GRDRRGNLTLLQRAGKYYGFEVAPMPALCVEGAR-VSSTRIRQALAQGNLSRAEQLLGRP 188

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +   VI G+K GRTLGFPTAN+ L    +   GV+A+     D     GVAN G  PT
Sbjct: 189 YRMSGRVIQGDKRGRTLGFPTANIALRRHRMPLTGVFAVEVYGLDNEPLPGVANVGVRPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +     LLE  + DF ++IYG+   V F   LRPE  F+ +  L   +  D   AR   
Sbjct: 249 -IGGRRALLEVHLLDFERDIYGRYLQVDFLRQLRPEKCFESLAALGQQIERDCGVARDFF 307

Query: 310 ES 311
            S
Sbjct: 308 TS 309


>gi|119470025|ref|ZP_01612830.1| bifunctional protein [Alteromonadales bacterium TW-7]
 gi|119446735|gb|EAW28008.1| bifunctional protein [Alteromonadales bacterium TW-7]
          Length = 316

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 168/318 (52%), Gaps = 14/318 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTI 62
           HNI      P+H  G V+ IGNFDG+HLGH  +L+   A   A+N P TVL F P P+  
Sbjct: 8   HNIR-----PHHF-GCVLTIGNFDGVHLGHAQVLKGLLADAKAHNLPSTVLLFEPQPQEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              ++    L+    + ++L  +G   +I   F    AN  AEQF+ ++L++ L VK + 
Sbjct: 62  FAKNNAPARLTRLRDKLRLLSDLGIERVICISFNQRFANMHAEQFVNEILIKKLGVKALT 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+ R G+  +L   G++ G             ++ VSS+ IR AL  G++ +A
Sbjct: 122 VGDDFRFGQQRKGNFNLLVNMGKQAGMDVQSTASFHQLNAR-VSSTLIREALACGNLADA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  + GVA
Sbjct: 181 KVMLGHNYAISGRVIHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQVF-GVA 239

Query: 243 NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT   NG   LLE  +FDF+Q+IYGQ   V     LR E KF+ + +L   +  D
Sbjct: 240 NIGNKPTF--NGTRALLEVHLFDFAQDIYGQFMHVELIQKLRDEKKFETLTQLTAQIATD 297

Query: 302 EKKARKILESSYPLSERD 319
              A++    +  +++RD
Sbjct: 298 VAAAKQCFGLN-QVADRD 314


>gi|237809690|ref|YP_002894130.1| riboflavin biosynthesis protein RibF [Tolumonas auensis DSM 9187]
 gi|237501951|gb|ACQ94544.1| riboflavin biosynthesis protein RibF [Tolumonas auensis DSM 9187]
          Length = 317

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 158/296 (53%), Gaps = 6/296 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           P H  G V+ IGNFDG+H GH  +L   QA       P  V+ F P P            
Sbjct: 12  PEH-AGCVLTIGNFDGVHRGHQAVLSRLQARAQQLGLPSCVMVFEPQPLEFFARDKAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           LS    + + +  +G   L+  KF    A  SA QFI+++LV  L V+ ++ G  FRFG 
Sbjct: 71  LSRLRDKYEAIASLGIDRLLCVKFDHTFAELSAAQFIEQILVRKLSVRFLVIGDDFRFGL 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R+GD  +L + G+++GF  +  D L +++ Q VSS+ +R AL  G + +   +LG+ ++
Sbjct: 131 HRSGDFALLVEAGKRHGFQVLSTDTLLHDQ-QRVSSTLLREALRDGRLADVELMLGHPYS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   ++  +GVYA++     +  + GVAN G  PT V
Sbjct: 190 ISGRVAHGAKLGRTIGFPTANIHLKRLVVPIQGVYAVQILIAGKMHF-GVANIGFRPT-V 247

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                 LE  IFDF  ++YG++  +     LR E KF     L+  +  D ++AR+
Sbjct: 248 SGTRSQLEVHIFDFKDDLYGKQLQIRVCHKLRDEQKFPSFTALQTQITADARQARQ 303


>gi|325479363|gb|EGC82459.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 313

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 163/307 (53%), Gaps = 8/307 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
           ++N  LP+ L+   V++GNFDG+HLGH  +++  ++I+   N    VL F  + +  ++ 
Sbjct: 9   DLNIDLPD-LERKAVSLGNFDGVHLGHQKLMKNNLEISKKYNLEPAVLLFKENTKLRLKQ 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                T     I+  IL  MG        F  +  N S  +FI +++ + L    VI G 
Sbjct: 68  EKEYMTSLEDKIE--ILASMGIETFCLIDFDEKFMNLSPREFISEIINKKLNASYVICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFGK  +GD   L K  E+Y + T  +D  + +    +SS++IR  + +G++  A  L
Sbjct: 126 DYRFGKKASGDIETLDKFEERYDYKTSVVDFEKEDHDNKISSNHIRDIIREGNIKKANRL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANF 244
           LG  + I+  V+ G K GRTL FPTAN+ LS + +L  +GVY  +    D   Y G+ N 
Sbjct: 186 LGRNYKIKGRVVDGMKRGRTLNFPTANLDLSFNYVLPVDGVYLTKVNV-DNEFYYGLTNI 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT   N    +E++I DF + IYG+  ++ F D+ R +IKF   E L   M  D+ K
Sbjct: 245 GTNPTF-ENADRKIETYILDFDKNIYGKDISIEFIDFFRYDIKFDSKEDLIDQMNSDKAK 303

Query: 305 ARKILES 311
           AR  LE+
Sbjct: 304 ARLYLEN 310


>gi|332519197|ref|ZP_08395664.1| riboflavin biosynthesis protein RibF [Lacinutrix algicola 5H-3-7-4]
 gi|332045045|gb|EGI81238.1| riboflavin biosynthesis protein RibF [Lacinutrix algicola 5H-3-7-4]
          Length = 305

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 170/304 (55%), Gaps = 9/304 (2%)

Query: 14  PNHLKG--GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPI 69
           PN L+    ++ IG FDG+H+GH  I+++ I + +   +  T+L+F PHPR ++Q  + I
Sbjct: 3   PNALENEQTIITIGTFDGVHIGHQKIIKRLIAVGSKKHLKPTILTFFPHPRMVLQKDANI 62

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    +  +LE +G   +I  KFT E +  +AE F++K+LV+ L  K +I G    F
Sbjct: 63  KLINTMDEKASLLESLGIKNMIVEKFTQEFSRLTAEDFVEKLLVKKLNAKYIIIGYDHHF 122

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++R+ +   L   G+ Y F    I     N    VSS+ IR AL +G +  A   LGY 
Sbjct: 123 GRNRSANIDNLIDFGKTYNFEVEEITAQDINDVA-VSSTKIRNALNEGDIKTANTYLGYN 181

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           F +   V+ G+ IG+T+ +PTAN++++    ++ K+GVY I+   + +T + G+ N G N
Sbjct: 182 FMLTGTVVKGKGIGKTINYPTANLEITETYKLIPKQGVYVIKSIIEGKTVF-GMMNIGTN 240

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT V      +E+  F++   +Y +   +   D LR E KF+ IE LK  + +D+ KA  
Sbjct: 241 PT-VDGTSQTIETHFFNWDVSLYNKTLKIELLDRLRDEQKFESIEVLKTQLKKDQNKALL 299

Query: 308 ILES 311
           I+++
Sbjct: 300 IIKN 303


>gi|330971960|gb|EGH72026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 308

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AASDFALAERMLGRPFQIVGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 232 GKAWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|167031664|ref|YP_001666895.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida GB-1]
 gi|166858152|gb|ABY96559.1| riboflavin biosynthesis protein RibF [Pseudomonas putida GB-1]
          Length = 322

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 13  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVIFEP 62

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L 
Sbjct: 63  QPREYFAPETAPARLARLRDKVELLAAEGIDRVLCLAFNQRLSKLSADAFVKAILVDGLG 122

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G++YGF     +TV  D LR      VSS+ +R 
Sbjct: 123 VRHLEVGDDFRFGCDRAGDFAFLIEAGKQYGFTVEAANTVIQDGLR------VSSTEVRK 176

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G+   A HLLG  ++I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 177 ALSEGNFELAEHLLGRPYSITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI 236

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E
Sbjct: 237 -DGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLE 295

Query: 293 KLK 295
            LK
Sbjct: 296 ALK 298


>gi|197335008|ref|YP_002155221.1| riboflavin biosynthesis protein RibF [Vibrio fischeri MJ11]
 gi|197316498|gb|ACH65945.1| riboflavin biosynthesis protein RibF [Vibrio fischeri MJ11]
          Length = 310

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 157/304 (51%), Gaps = 10/304 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI      P+H KG V+ IGNFDG+HLGH  +L+Q    A     P  V++F P P   
Sbjct: 8   HNIT-----PDH-KGCVMTIGNFDGVHLGHQQVLQQVKSKAKELGLPSVVMTFEPQPMEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L+K+    L+   F  + A  SA++F++ +LV  L VK ++
Sbjct: 62  FAKEKAPARLTRLRDKFVQLKKLEIERLLCINFNQKFAEQSADEFVEDLLVRLLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK R G+  +LQ+ G+K+GF  V        + Q VSS+ IR+AL    + + 
Sbjct: 122 VGDDFCFGKHRKGNFAMLQEAGKKHGFEVVNTQSF-CLQQQRVSSTAIRSALLHNKLDDV 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +  +     GVA
Sbjct: 181 ATMLGRHYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSEGKQLGGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE   FD+   +YGQ+  V     LR E KF+  + LK  +  D 
Sbjct: 241 NIGHRPT-VNGARQQLEVHFFDYKGNLYGQQLDVELLYKLRDEHKFESFDALKQQIELDS 299

Query: 303 KKAR 306
           + AR
Sbjct: 300 QAAR 303


>gi|293392922|ref|ZP_06637239.1| riboflavin biosynthesis protein RibF [Serratia odorifera DSM 4582]
 gi|291424456|gb|EFE97668.1| riboflavin biosynthesis protein RibF [Serratia odorifera DSM 4582]
          Length = 312

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 10/313 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI          +G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +
Sbjct: 8   HNIRARH------RGCVLTIGNFDGVHRGHKALLEQLEQEGKRLGLPVIVMIFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
             +      L+    + K L + G   L+  KF    A  +A+ FI ++LVE L V+ ++
Sbjct: 62  FAADKAPARLTRLRDKAKYLAQAGVDTLLCVKFDPRFAANTAQAFIAELLVEKLGVRFLM 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG +R GD  +LQK GE+YGF  V     R    +I SS+ IR AL    +  A
Sbjct: 122 VGDDFRFGANRIGDFPLLQKAGEEYGFEVVSTPTFREGDRRI-SSTAIRNALRDDDLPLA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVA
Sbjct: 181 EKLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPQPLPGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE  + D + ++YG+   V     LR E +F  ++ LK  +  D 
Sbjct: 241 NIGTRPT-VAGVRQQLEVHLLDVTMDLYGRHLDVVLRAKLRNEQRFASLDALKQQIANDV 299

Query: 303 KKARKILESSYPL 315
             AR       P+
Sbjct: 300 VTARSFFGLKTPV 312


>gi|255035040|ref|YP_003085661.1| riboflavin biosynthesis protein RibF [Dyadobacter fermentans DSM
           18053]
 gi|254947796|gb|ACT92496.1| riboflavin biosynthesis protein RibF [Dyadobacter fermentans DSM
           18053]
          Length = 308

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 172/313 (54%), Gaps = 18/313 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M+++H+++  + L      GVV  G FDG+HLGH  IL +  +I   S     VL+F PH
Sbjct: 1   MNIYHSLDSFEKLEY----GVVTSGTFDGVHLGHQKILARLKEITEQSGGESVVLTFWPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PRT++   S    L   +I+EKI    K+G   L    FT   +  ++E+FI+++LV+ +
Sbjct: 57  PRTVVSEDSQDLQL-LSTIEEKIELFSKLGIHHLAIVPFTRSFSELTSEEFIKEILVQKI 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTAL 174
             K ++ G   RFG++R G    LQK   +YGF    ++E+   + +   +SSS IR AL
Sbjct: 116 GTKKLVIGYDHRFGRNREGSFEFLQKNCSEYGFE---VEEIPREDIEHTAISSSRIRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRT 232
             GH+  A  LLG  + +   V+ G+++GRT+GFPTAN+ +  +  ++   GVY I    
Sbjct: 173 ITGHIHEANELLGRNYALSGTVVKGKQLGRTIGFPTANLYVHEAYKLIPMNGVYVINAIH 232

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           Q Q  + G+ N G  PT V      +E+ +FDF +EIYG+   +    YLRPE KF  ++
Sbjct: 233 QGQ-RFKGMLNIGVRPT-VDGTVRTIEAHLFDFDKEIYGEDLQLELLHYLRPEQKFDGLD 290

Query: 293 KLKIYMGEDEKKA 305
            L   +  D++ A
Sbjct: 291 MLVRQIKIDQENA 303


>gi|28897307|ref|NP_796912.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260363893|ref|ZP_05776641.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           K5030]
 gi|260876270|ref|ZP_05888625.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AN-5034]
 gi|260895078|ref|ZP_05903574.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           Peru-466]
 gi|28805516|dbj|BAC58796.1| riboflavin kinase/FMN adenylyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308088916|gb|EFO38611.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           Peru-466]
 gi|308093040|gb|EFO42735.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AN-5034]
 gi|308112949|gb|EFO50489.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           K5030]
 gi|328472069|gb|EGF42946.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           parahaemolyticus 10329]
          Length = 311

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 161/310 (51%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI      P+H  G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +
Sbjct: 8   HNIA-----PHHY-GCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQPMEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ GEKYGF  V      + +LR      VSS+ IR AL + 
Sbjct: 122 VGDDFCFGKGRLGNFAMLQEAGEKYGFEVVSTQSFCLQQLR------VSSTAIREALARD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++        
Sbjct: 176 DLHAAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  E LK 
Sbjct: 236 VGGVANIGQRPTV--NGVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQ 293

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 294 QIELDAEAAR 303


>gi|262340860|ref|YP_003283715.1| bifunctional riboflavin kinase/FAD synthetase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272197|gb|ACY40105.1| bifunctional riboflavin kinase/FAD synthetase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 312

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 169/292 (57%), Gaps = 9/292 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQE 79
           ++ IG FDG+H+GH  I++  I  A      VL +F+PHP+ I+      F L+  +I E
Sbjct: 17  ILTIGIFDGVHMGHKKIIQNLILSAEKKYCPVLITFHPHPKEILNPGKKFFYLN--TISE 74

Query: 80  KI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +I  L+K+G   LI + F++  +  S ++F+ K+L     +K +ITG     GK+R G  
Sbjct: 75  RIYNLKKIGIEHLIVHPFSINFSKLSTKKFLNKILHSQFRIKQIITGHDSHIGKNRDGSY 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K    YGF    ++  + NK +IVSS++IR +L  G++  A   LGY +T+  +VI
Sbjct: 135 EELKKLSHIYGFKLYQVEAYKLNK-RIVSSTDIRKSLLLGNIQWANQALGYLYTLSGNVI 193

Query: 198 HGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM-VPNGP 255
            G+ IG+T+ FPTAN+Q+ S  ++ K GVYA++    D   Y G+ N G NPT+   N  
Sbjct: 194 KGKGIGKTIQFPTANLQIDSKKLIPKNGVYAVKINYLDNI-YQGMLNIGFNPTIDQQNQK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           + +E  IF+F + IYG++  +S    +R E KF  +++LK  + +DE   +K
Sbjct: 253 INVEVHIFNFFENIYGKKIEISIIHMIREEKKFNTLQELKKQIEKDEINIKK 304


>gi|261212210|ref|ZP_05926496.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC341]
 gi|260838818|gb|EEX65469.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC341]
          Length = 322

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 160/315 (50%), Gaps = 26/315 (8%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI+      +  +G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +
Sbjct: 8   HNIQ------SRHQGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLEL 61

Query: 63  I---QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
               Q+ + +  L    +Q   L K+G   L+   F    A      FI+ +LV  L VK
Sbjct: 62  FAKQQAPARLTRLRDKFVQ---LSKLGVDRLLCVNFNHHFAQLDPHTFIRDLLVARLGVK 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTAL 174
            ++ G  F FGK+R G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL
Sbjct: 119 FLVVGDDFCFGKERKGNFALLQQAGQALGFEVVSTQSFCLQQLR------VSSTAIREAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
               + +AA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      
Sbjct: 173 AADQLSSAATMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLG 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           QT + GVAN G  PT V      LE   FDF   +YG++  V+    LR E KF   E L
Sbjct: 233 QTPFGGVANIGNRPT-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEAL 291

Query: 295 KIYMGEDEKKARKIL 309
           K  +  D + AR  L
Sbjct: 292 KQQIELDAEAARVWL 306


>gi|21230612|ref|NP_636529.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66769392|ref|YP_244154.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|21112193|gb|AAM40453.1| riboflavin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574724|gb|AAY50134.1| riboflavin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 362

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P+   G VV IG FDG+HLGH  ++  A++ A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHQALVRHAVERARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
               + +P     PP +   + KI    GF A    +IR+   L     SA+ F++  LV
Sbjct: 61  EFFANDTP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRLSA--MSAQDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R GD  +L+  GE++GF    I  + + + + +S++ IR  
Sbjct: 114 GRLCAREVWIGPEFRFGHRRGGDIALLRALGEQHGFAAGEIAPV-HLRGERISATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++ S    L  G+YA      
Sbjct: 173 LVAGEFAHAGELLGRPYAIGGRVVRGKQLGRTLGYPTANLRFSRTPALS-GIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AAQPWPSVSSFGTRPTVAGIEP-LLEAHLFDFQGDLYGRHIAVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D ++AR +L +
Sbjct: 291 LTVQMHRDAEQARAVLAT 308


>gi|153838775|ref|ZP_01991442.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ3810]
 gi|149747807|gb|EDM58697.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ3810]
          Length = 311

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 161/310 (51%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           HNI      P+H  G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +
Sbjct: 8   HNIA-----PHHY-GCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQPMEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L VK ++
Sbjct: 62  FAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ GEKYGF  V      + +LR      VSS+ IR AL + 
Sbjct: 122 VGDDFCFGKGRLGNFAMLQEAGEKYGFEVVSTQSFCLKQLR------VSSTAIREALARD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++        
Sbjct: 176 DLHAAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  E LK 
Sbjct: 236 VGGVANIGQRPTV--NGVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQ 293

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 294 QIELDAEAAR 303


>gi|241663922|ref|YP_002982282.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           pickettii 12D]
 gi|240865949|gb|ACS63610.1| riboflavin biosynthesis protein RibF [Ralstonia pickettii 12D]
          Length = 332

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 164/312 (52%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  + ++F++ VLV+ L  + ++
Sbjct: 61  FMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAGQTPDEFVRNVLVDGLHTRWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFAYLQAAGAQFGFEVEQMGSVSESGVRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVAGIFVVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  + +D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHIFDYQANVYGKLVRVEFMKKLRDEARYDSLDALKDAIAQDC 299

Query: 303 KKARKILESSYP 314
             AR+    + P
Sbjct: 300 VHARQFFGLAVP 311


>gi|288940911|ref|YP_003443151.1| riboflavin biosynthesis protein RibF [Allochromatium vinosum DSM
           180]
 gi|288896283|gb|ADC62119.1| riboflavin biosynthesis protein RibF [Allochromatium vinosum DSM
           180]
          Length = 313

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 31/310 (10%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V  IGNFDG+HLGH  + ++ +        P TV++F P P  +    S       P
Sbjct: 15  RGCVATIGNFDGVHLGHRAVFQRLLARGCELGLPATVITFEPQPMEVFAPESA------P 68

Query: 76  SIQEKILEKMG------FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           +   ++ EK+G         ++  +F    A   A +F+Q++L+E L V+ ++ G  FRF
Sbjct: 69  ARLTRLREKLGALRASDIERVMLLEFGPRLAAMPAPEFVQRLLIEGLGVRFLLVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGE-----KYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           G+ R GD  +L+  G        GF     HT+       + ++ +SS+ +R AL +G +
Sbjct: 129 GRGRTGDFALLRDMGRVAEANGAGFAVEDLHTI------THGAERISSTRVREALARGDL 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A HLLG  + +E  V+HG+K GR +GFPTAN+ L   +    GVYA+R +      + 
Sbjct: 183 EQARHLLGRPYCLEGRVVHGDKRGRAIGFPTANIALHRRVSPVRGVYAVRVKGLGSEPWP 242

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVAN G  PT+   G   LE  +FDF Q IYG+   V     LR E +F+  E L+  + 
Sbjct: 243 GVANIGTRPTVDGTGA-RLEVHLFDFDQSIYGRHLEVELVLRLRDEQRFESFEALRGQIQ 301

Query: 300 EDEKKARKIL 309
            D   AR  L
Sbjct: 302 RDAGTARAFL 311


>gi|77359864|ref|YP_339439.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874775|emb|CAI85996.1| bifunctional protein [Includes: Riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Pseudoalteromonas haloplanktis TAC125]
          Length = 308

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 154/292 (52%), Gaps = 7/292 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L+  +    ANN P TV+ F P P+     S+    L+   
Sbjct: 16  GCVLTIGNFDGVHLGHAEVLKGLLIDAKANNLPSTVMLFEPQPQEFFAKSNAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +L ++G   +I   F  + AN  AEQF+  +L++ L VK +  G  FRFGK R G+
Sbjct: 76  DKLLLLSELGIERVICISFNQQFANMHAEQFVSDILIKKLGVKALTVGDDFRFGKQRQGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L   G++           R   ++ VSS+ IR AL  G +  A  +LG+ + I   V
Sbjct: 136 FDLLVSMGKQASMDVKSTASFRQLNAR-VSSTLIREALAAGDLSTAKVMLGHNYAISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP- 255
           IHG K GR LGF TAN+ L   +    GV+A++     +  Y GVAN G  PT   NG  
Sbjct: 195 IHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQVY-GVANIGNKPTF--NGTR 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LLE  +FDF+Q+IYGQ   V     LR E KF+ + +L   +  D   A++
Sbjct: 252 ALLEVHLFDFAQDIYGQFMHVELIKKLRDEKKFETLTQLTAQIATDVAAAKQ 303


>gi|89890031|ref|ZP_01201542.1| FAD synthase and riboflavin biosynthesis protein [Flavobacteria
           bacterium BBFL7]
 gi|89518304|gb|EAS20960.1| FAD synthase and riboflavin biosynthesis protein [Flavobacteria
           bacterium BBFL7]
          Length = 311

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 172/314 (54%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +F NI   ++     KG VV IG FDG+H GH  IL++  +IA    +T  +L+F PH
Sbjct: 1   MKIFENIASYKAE----KGAVVTIGTFDGVHQGHQKILKRVTEIAKQKSLTSVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S +  ++    ++ ++   G   ++ + F+LE A  SA  +++ +LV+ L  
Sbjct: 57  PRMVLQPDSDLKLINTIEERQLLIAANGIENIVTHPFSLEFARTSAHDYVKNILVDQLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G   RFG++RA     L++ G+++ F  V I + ++ +   VSS+ IR A+  G 
Sbjct: 117 AVVVIGYDHRFGRNRAASINELEEYGKEFNFKVVQISK-KDIEEVTVSSTKIRNAIESGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQT 236
           +    + L   +++  D++ G+ IGRT+ +PTAN+++S +  +L K GVY I     D  
Sbjct: 176 METTRNYLNRPYSVTGDIVQGKAIGRTINYPTANLKVSKNYKLLPKNGVY-ITSSIIDGI 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G+ N G NPT+  +    +E++  DF+ ++Y  +  + F   LR E+KF  +E L  
Sbjct: 235 VVYGMTNIGVNPTISNDLKKTIETYYIDFTGDLYHTQMELFFHKRLRNELKFNSMEDLTA 294

Query: 297 YMGEDEKKARKILE 310
            M EDE   R  ++
Sbjct: 295 AMKEDELNTRTYVQ 308


>gi|329851140|ref|ZP_08265897.1| riboflavin biosynthesis protein RibF [Asticcacaulis biprosthecum
           C19]
 gi|328839986|gb|EGF89558.1| riboflavin biosynthesis protein RibF [Asticcacaulis biprosthecum
           C19]
          Length = 332

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 155/291 (53%), Gaps = 3/291 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIG+FDG+H+GH  ++E AI  A  +    +V+ F+PHP++  +  S  F L   
Sbjct: 38  RGTAAAIGSFDGVHIGHQHVIESAIDAAARTGARSSVICFDPHPQSFFRPDSSPFRLMRV 97

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S Q +  E +G    +  +F    ++  A+ F + +L + L +     G  F+FGK   G
Sbjct: 98  SQQVRAFEALGVDYALIIRFDGNLSSLDADAFARVILRDHLALSHCSAGFDFQFGKRGGG 157

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L   GE++GF T  +    +   Q +SSS +R AL  G    A ++LG       +
Sbjct: 158 HAKDLVAFGEQFGFTTDILPLQTDQAGQKLSSSAVRDALLAGDARTAENILGRPQAYVGE 217

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG K GRT+ FPT N++L   +  + G+Y  + R  D    +GV+N G  PT+  N  
Sbjct: 218 VIHGAKQGRTIDFPTLNIRLGDYLRPRYGIYVTQTRLGDGRVVNGVSNIGVRPTVGGN-I 276

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LLE+++FDF ++IYGQ       D++RPE KF   E++++ + +D   AR
Sbjct: 277 ELLETYLFDFKEDIYGQTVETLLRDFIRPEAKFDSFEEMRVQIQKDAGTAR 327


>gi|171913138|ref|ZP_02928608.1| riboflavin biosynthesis protein RibF [Verrucomicrobium spinosum DSM
           4136]
          Length = 310

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 166/298 (55%), Gaps = 5/298 (1%)

Query: 17  LKGGV-VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           L+G V +AIG FDG+HLGH  ++  A+  A  +     V++F+PHP  +++  S    L 
Sbjct: 13  LRGPVALAIGVFDGVHLGHQEVIRAAMDHAATHQGTAVVMTFDPHPLRVLRPESAPRLLC 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + +ILE++G + ++  KFT + A   A QF+  +      +  +  G  + FGK R
Sbjct: 73  STRHKLQILEQLGVTDVLICKFTPDFAKIDAAQFVGALSQSCQPLGFISVGYTWSFGKGR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+   L + G ++GF    + E++ +  ++VSS+ IR A+       AA LLG  +T+ 
Sbjct: 133 GGNIHQLMELGREFGFGVYGVPEVKLS-DEVVSSTLIREAVRAADFSRAAELLGRPYTVL 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            +V+ G ++GRTLGFPTAN+++  + L   GVYA+R +   +   SGVAN G  PT+   
Sbjct: 192 GEVVVGRQLGRTLGFPTANVRVENEELPPTGVYAVRVQLNGRC-LSGVANLGFRPTVDSG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           G   LE  +FD S + YG +  V+F   LR E KF  +E LK  +  D  +AR +L++
Sbjct: 251 GERSLEVHLFDQSGDFYGHQMEVAFVQKLRDERKFDGLEALKAQIALDATEARSVLQA 308


>gi|226313015|ref|YP_002772909.1| riboflavin biosynthesis protein RibC [Brevibacillus brevis NBRC
           100599]
 gi|226095963|dbj|BAH44405.1| riboflavin biosynthesis protein RibC [Brevibacillus brevis NBRC
           100599]
          Length = 313

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/309 (35%), Positives = 165/309 (53%), Gaps = 12/309 (3%)

Query: 6   NIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRT 61
            I +    P+ L+     +A+G FDG+H+GH  ++++AI  A  N    TV++F+PHPR 
Sbjct: 3   TIYLTYPFPSDLQANPCAIALGYFDGVHIGHRRVIQKAIDTAKANGWQSTVVTFDPHPRE 62

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++  S     L+P + + +  EKMG       KF +  A    E FI + L+  LE + +
Sbjct: 63  VLGQSGYTRYLTPLADKLEQFEKMGVDTTYVMKFDISFAAIYPEDFITECLLP-LECRHI 121

Query: 122 ITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           + G  + FG    G    LQ+  + +YG   V      N   + VSS+ IR  L  G V 
Sbjct: 122 VVGFDYTFGYRGMGTAHTLQEMSKGRYGLDIV---GPVNRLGEKVSSTIIREYLHHGDVE 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS 239
              HLLG  + +   V+HG+K GRT+GFPTAN+Q++ P ++ K GVY +RF T D+ SY 
Sbjct: 179 QVRHLLGRSYKVRGTVVHGDKRGRTIGFPTANVQVNQPYLIGKNGVYGVRF-TVDEQSYY 237

Query: 240 GVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GV N G  PT  +      LE  IF+FS EIY +   V F  Y+R E KF  ++ L   +
Sbjct: 238 GVMNVGIKPTFELEKKEKSLEVHIFEFSGEIYDKEVEVEFLFYIREEQKFAGVDALIAQI 297

Query: 299 GEDEKKARK 307
           G D + A++
Sbjct: 298 GRDVQTAKQ 306


>gi|145589919|ref|YP_001156516.1| riboflavin biosynthesis protein RibF [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048325|gb|ABP34952.1| FMN adenylyltransferase / riboflavin kinase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 316

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 20/307 (6%)

Query: 14  PNHLKGGVVA---IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           P     G+     IGNFDG+H GH  +L+Q +  A    +   V++F PHP+        
Sbjct: 7   PTQFSAGLACALTIGNFDGVHRGHRALLKQLVDGATERGLVSCVMTFEPHPKEFFSPEQ- 65

Query: 69  IFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
               +PP I   ++K+  L ++G   ++   F    A  S E+F+ +++V+ L  K ++ 
Sbjct: 66  ----APPRILNLRDKLAALAELGIDRVVVEHFNTAFARLSPEEFVSEIIVKRLNAKWILI 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +G  RAGD   L+  GEKYGF    I  +  N  +I SSS +R AL  G +L A 
Sbjct: 122 GDDFCYGAKRAGDFASLKAAGEKYGFEVSSIQTILENGERI-SSSALRNALGSGDMLQAE 180

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
            LLG  ++I   VIHG+++GR LGFPT N+ ++  +  ++    G++  +       +  
Sbjct: 181 KLLGRPYSISGHVIHGQQLGRQLGFPTLNLAVANHLHHRKPATTGIFTAQVLGLSDKALP 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            VA+ G  PT+   G +LLE+ +FD+ Q++YG+  TV   + +R E K+  +  L   + 
Sbjct: 241 AVASLGVRPTVEDEGRVLLETHVFDYQQDVYGKIITVELLEKIRDEAKYDGLVALTQAIA 300

Query: 300 EDEKKAR 306
            D K AR
Sbjct: 301 SDAKHAR 307


>gi|258541832|ref|YP_003187265.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01]
 gi|256632910|dbj|BAH98885.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01]
 gi|256635967|dbj|BAI01936.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-03]
 gi|256639022|dbj|BAI04984.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-07]
 gi|256642076|dbj|BAI08031.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-22]
 gi|256645131|dbj|BAI11079.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-26]
 gi|256648186|dbj|BAI14127.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-32]
 gi|256651239|dbj|BAI17173.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654230|dbj|BAI20157.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-12]
          Length = 315

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 157/301 (52%), Gaps = 1/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P    G   A+GNFDG+HLGH  ++        + P+ V++F PHPR + +   P F
Sbjct: 11  RDIPPEAHGCAAALGNFDGVHLGHAHLVHSTHAARPDLPLAVVTFEPHPRELFRPQDPPF 70

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS P  +   L+ +G   + +  F  E +  +AE+F++ VL + L ++ V  G  F FG
Sbjct: 71  RLSLPDERFAALQALGVQHVFQIGFDEEFSRMTAERFVEDVLHDALCLRHVACGPDFAFG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   L +R  + G     +  L  + +   SS+ IR  L +G+   A   LG  +
Sbjct: 131 YRRGGDVTFLAERTGELGMGFTSVPAL-ADAAGPYSSTRIRRLLQEGYPERATEELGRPW 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V HG+K GR LGFPTAN+ L   +    GVYA+  R     +  GVAN GR PT+
Sbjct: 190 FIRGQVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVTVRLPGGYTRPGVANIGRRPTI 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E  +FDF  ++YGQ  +V+    LR E +F  +++LK  + +D ++AR +L 
Sbjct: 250 NDGQESRVEVNLFDFDGDLYGQTLSVALHKMLRAEQRFAGLDELKAQIAQDAQQARMVLN 309

Query: 311 S 311
           +
Sbjct: 310 A 310


>gi|190573351|ref|YP_001971196.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Stenotrophomonas maltophilia K279a]
 gi|190011273|emb|CAQ44886.1| putative riboflavin biosynthesis protein RibF [Stenotrophomonas
           maltophilia K279a]
          Length = 315

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 160/309 (51%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+    A       ++F P PR
Sbjct: 4   LFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P   L+    + +IL ++G  A+   +F    A   AE F++++LV+ L  + 
Sbjct: 61  EFFAQGTPPPRLTLARSKVEILRELGVDAVGLLRFDAAMAAMPAETFVRQLLVKRLSARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L +G   
Sbjct: 121 VWIGPEFCFGNRRRGDLALLQKMGAELGFTAGEIEAV-DLHGERISSTRIRQLLQQGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          +  
Sbjct: 180 RANDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M  
Sbjct: 239 VSSFGTRPTVEGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAEQARAIL 306


>gi|149377783|ref|ZP_01895516.1| riboflavin kinase/FAD synthase [Marinobacter algicola DG893]
 gi|149357955|gb|EDM46444.1| riboflavin kinase/FAD synthase [Marinobacter algicola DG893]
          Length = 323

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 157/300 (52%), Gaps = 5/300 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+HLGH  I++Q  + A     P  V+ F P PR   Q       L P  
Sbjct: 24  GCVATIGNFDGVHLGHQTIIDQVHEKALELGVPSVVMVFEPQPREFFQGREAPPRLMPFR 83

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L   G   ++  +F     +YS   FI+ VL++ L V+ ++ G  FRFG DRAGD
Sbjct: 84  QKFESLLASGIDVVLCLRFNERFRSYSGMGFIEDVLMDGLGVRHLVVGDDFRFGCDRAGD 143

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ GE+ GF TV          + VSS+ IR  L++  + +A  LLG+ + I   +
Sbjct: 144 FSLLREVGEQRGF-TVENTRTVTVHGERVSSTRIRGVLSENRINDAEDLLGHPYRIRGRI 202

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           ++G ++GR +G PTAN+ L P +   +GVY +    ++     GVAN G  PT+    P 
Sbjct: 203 VYGRQLGRQIGAPTANILL-PHMPALKGVYVVSATLENGRVLDGVANIGLRPTVDGKQP- 260

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
            LE  +FDF+  +YGQR  V F   LR E+KF  +E LK  +  D   AR  +     L+
Sbjct: 261 SLEVHLFDFAGTLYGQRLDVVFRHALRDEVKFDSVEDLKEQIARDFDDARAWIAGHGSLA 320


>gi|308272077|emb|CBX28685.1| hypothetical protein N47_G40090 [uncultured Desulfobacterium sp.]
          Length = 311

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 18/318 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFN 56
           M + ++IE   S+    K  VV IGNFDG+H+GH    H ++E+A  I   S    ++FN
Sbjct: 1   MKIINSIE---SIKKPFKNAVVTIGNFDGVHIGHQALFHAVIEKADSINGTS--VGITFN 55

Query: 57  PHPRTIIQSSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PHP  +++ +   P+ T+    I+  ++EK G   LI   FT E A   A +FI+ +L++
Sbjct: 56  PHPVKVLKKNRHIPLITIHEQKIE--LIEKTGLDVLICIPFTPEFAKLPALEFIKDLLIK 113

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRT 172
            + +K ++ G  + FGK+R G+   L+   ++YG+  +  D   + N     +SS+ IR 
Sbjct: 114 KIGMKAIVVGNDYVFGKNREGNTEFLKACSKEYGYEVIVADWISITNTIPGRISSTKIRK 173

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            + +G V     LLG  + I   V  G  + G+ LGFPTAN+ +  ++  K+GVYA+   
Sbjct: 174 LVAEGRVAKTQQLLGRYYQIRGTVEKGRNRGGKLLGFPTANLLMQDELAPKKGVYAVTVE 233

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
             +   Y GVAN G +PT   N    +E  + DF+++IYG+   ++F   +R E+KF  I
Sbjct: 234 -YNGLKYKGVANIGYSPTFDDN-IFTIEVHLLDFNKDIYGKNIRINFVKRIRDELKFSGI 291

Query: 292 EKLKIYMGEDEKKARKIL 309
            +L   + +D  KAR IL
Sbjct: 292 AELSEQIKKDIDKARSIL 309


>gi|86130924|ref|ZP_01049523.1| riboflavin biosynthesis protein RibF [Dokdonia donghaensis MED134]
 gi|85818335|gb|EAQ39495.1| riboflavin biosynthesis protein RibF [Dokdonia donghaensis MED134]
          Length = 317

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 168/300 (56%), Gaps = 11/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VV IG FDG+HLGH  I+ +  + A  N     VL+F PHPR ++Q  + +  ++  
Sbjct: 14  KGTVVTIGTFDGLHLGHRKIINRINESARANGWESCVLTFFPHPRMVLQKDTSLKLINTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +E++LE +    L+ + FTL+ + Y AE F++++LV  L  K VI G   RFG++R  
Sbjct: 74  AEREQLLESLDLDHLVIHPFTLDFSRYHAETFVEEILVNSLNAKKVIIGYDHRFGRNRNA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +   L++ G+  GF    ++E+   + +   +SS+ +R AL  G+V  A   L   F + 
Sbjct: 134 NIEDLKRFGKTLGFE---VEEISKQELEDVAISSTKVRKALVSGNVALANSYLSAPFMLN 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G+ +GRT+G+PTAN++++ D  L   +GVY  +     +  + G+ N G NPT V
Sbjct: 191 GVVVKGKSLGRTIGYPTANLEIAEDYKLIPAQGVYVAKAIINGKPVF-GMMNIGTNPT-V 248

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 +E++ FDF +++YGQ+  +   + +R E  F  I++L   M  DE  +R  + S
Sbjct: 249 GGEKQTIETYFFDFDEDLYGQQLEIQLLERIREEKTFDTIDELVAAMKTDEAFSRNYIAS 308


>gi|119489872|ref|ZP_01622627.1| hypothetical protein L8106_30460 [Lyngbya sp. PCC 8106]
 gi|119454300|gb|EAW35451.1| hypothetical protein L8106_30460 [Lyngbya sp. PCC 8106]
          Length = 363

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 177/363 (48%), Gaps = 64/363 (17%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-------------------NSP 49
           I  SL   L    VA+GNFDGIH GH  +++   K +                    +SP
Sbjct: 3   ITSSLNTVLTPTAVALGNFDGIHRGHRQVIQPIFKQSQSFSSSLLSQQQPEILLTQVDSP 62

Query: 50  I----------------------------------TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +                                  TV++F+PHP+      S    L+P 
Sbjct: 63  LQPPTPAQNYRSGVSLTPEENRLNFDAGESHQRYATVVTFHPHPQEFFTGQSKKL-LTP- 120

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            I EKI  L+ MG   ++   F  + A+ S  +F+++++++ L+   V  G  FRFGK R
Sbjct: 121 -IDEKIECLQMMGVEQMVLLAFDQQLASLSPPEFVEEIVIKHLQASHVTIGFDFRFGKGR 179

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    LQ     YG     +D     + + +SSS IR AL +G++  A  LLG  +T+ 
Sbjct: 180 TGTAKDLQAIAAPYGVEVTIVDRYPCEQGERISSSMIRQALEQGNLQRAHQLLGRDYTLV 239

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ----TSYSGVANFGRNP 248
             V+ G+++GRT+GFPTAN+Q+ P+  L   GVYA++  +  +    T+Y  V N G  P
Sbjct: 240 GQVVPGQQLGRTIGFPTANLQVPPEKFLPSYGVYAVQVFSSGEALNLTAYPAVMNIGCRP 299

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+    P  +E ++ D+S ++YGQ  T+   ++LRPE KF  +++LK  +  D  +A+K+
Sbjct: 300 TVEGQQP-TVEVYLLDWSGDLYGQTLTICLKEFLRPEQKFASLDELKAQIVADCVQAKKV 358

Query: 309 LES 311
           L S
Sbjct: 359 LNS 361


>gi|330977515|gb|EGH77461.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 308

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV I+ +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIEGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 232 GKAWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|116073394|ref|ZP_01470656.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9916]
 gi|116068699|gb|EAU74451.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9916]
          Length = 305

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 4/293 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  +++   +  +    TV+SF PHPR ++   + +  L  P  +  
Sbjct: 15  ALALGSFDGLHAGHRRVIDAVCQEPHGGVPTVVSFWPHPREVLHGEARL-RLDLPEEKLS 73

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L+ +G   L+   F  + A  SAE+F++ +L+E L+ + +  G  FRFG+ R G    L
Sbjct: 74  LLQPLGIEQLVLVPFDQDLARLSAEEFVRTMLLETLQARHIAVGANFRFGRGRLGTTETL 133

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           Q    + G     +  L  + S  +SSS IR AL++G +  A  LLG  +     V+ G 
Sbjct: 134 QTLCRQSGAQVTVLPIL-EDASGAMSSSRIRAALSEGDLAMAQQLLGRPYRFSGTVVQGR 192

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
            +G T+G+PTAN+Q+     L   GVYA   +  D+  +   V N G  PT+ PN P  +
Sbjct: 193 GLGHTIGWPTANLQVDGRKFLPGLGVYAAWAQVGDEDVHLPAVMNLGPQPTVDPNSPSAV 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E  + D ++E+ GQR TV     LR + +F  +E+L   +G D + AR  L +
Sbjct: 253 EVHLLDTNRELVGQRLTVEPVQRLRGQQRFSGLEELSAQIGRDAQMARTTLRA 305


>gi|330811821|ref|YP_004356283.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379929|gb|AEA71279.1| Putative bifunctional protein: Riboflavin kinase; FAD synthetase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 312

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 160/318 (50%), Gaps = 24/318 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PQH-RGCVATIGNFDGVHRGHQAILARLRERALEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++    L+    + ++L   G   ++   F    +  SA  F++ +LV+ L VK
Sbjct: 59  RECFDPATAPARLARLRDKLQLLAAEGIDRVLCLAFNRRLSKLSAAAFVETILVDGLGVK 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G   GF      TV ID LR      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGCDRVGDFNYLQQAGIAQGFTVEAAQTVEIDGLR------VSSTQVRNAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  LLG  + I   ++HG+K+ R LG PTAN+QL    +   GV+ +     D
Sbjct: 173 AAADFELAERLLGRPYRIAGRILHGQKLARQLGTPTANVQLKRRRVPLTGVFLVSVEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E L
Sbjct: 232 GKTWPGVANIGVRPTVQGDGKAHLEVHVLDFAGDLYDRRLTVVFHHKLREEQRFASLEAL 291

Query: 295 KIYMGEDEKKARKILESS 312
           K  +  D   AR ++ +S
Sbjct: 292 KTAIHADIAAARALVATS 309


>gi|157368942|ref|YP_001476931.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           proteamaculans 568]
 gi|157320706|gb|ABV39803.1| riboflavin biosynthesis protein RibF [Serratia proteamaculans 568]
          Length = 312

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKQEGQRLGLPVMVMIFEPQPLEMFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  KF    A  +A+ F+ ++LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAELLVEKLGVKFLMVGDDFRFGATRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G++YGF  +     R    Q +SS+ IR AL    +  A  LLG+ ++I   V
Sbjct: 136 FPLLQKAGKEYGFEVISTPTFREG-DQRISSTAIRNALRDDDLALAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPQPLPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   ARK      P+
Sbjct: 254 QLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARKFFGLQTPV 312


>gi|194364902|ref|YP_002027512.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Stenotrophomonas maltophilia R551-3]
 gi|194347706|gb|ACF50829.1| riboflavin biosynthesis protein RibF [Stenotrophomonas maltophilia
           R551-3]
          Length = 315

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 158/309 (51%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+    A       ++F P PR
Sbjct: 4   LFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P   L+    + +IL ++G  A+   +F    A   AE F++++LV  L  + 
Sbjct: 61  EFFAQGTPPPRLTLARSKVEILRELGVDAIGLLRFDAAMAAMPAETFVRQLLVNRLSARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L  G   
Sbjct: 121 VWIGPEFCFGNRRRGDLALLQKLGAELGFSAGEIEAV-DLHGERISSTRIRQLLQDGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          +  
Sbjct: 180 RAGDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M  
Sbjct: 239 VSSFGTRPTVDGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAEQARAIL 306


>gi|327399687|ref|YP_004340556.1| riboflavin biosynthesis protein RibF [Hippea maritima DSM 10411]
 gi|327182316|gb|AEA34497.1| riboflavin biosynthesis protein RibF [Hippea maritima DSM 10411]
          Length = 304

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 5/295 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           ++   +A+GNFDGIH GH  ++ + +K++    +T  V +F+PHP+ +I+     F +  
Sbjct: 13  IEATAIALGNFDGIHRGHQALINETVKLSKKLNLTPAVFTFHPHPKKVIEHIDEPFLIQR 72

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + KI+E  G   ++   FT   A      F++ +L++ +  + +  G  + FGK   
Sbjct: 73  FKEKTKIIESFGIDIVVCAHFTQAFAEMEPYNFVKDILIDRMHARAICVGHDYTFGKKAL 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L++     GF  + I   + N + IVSS+ IR  L  G +  A   LG  +TI  
Sbjct: 133 GTTKTLRELSNSLGFELIVIPPFKINGT-IVSSTRIREFLRTGQIGLANEFLGRNYTISG 191

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V  GE  G +LGFPTAN+  + +ILL  GVYA  +   D   Y+   N G NPT     
Sbjct: 192 IVKEGEGRGSSLGFPTANIYPTNEILLTNGVYA-AYVYIDSKKYAAAVNVGVNPTF-KGT 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E+FIFDF+ ++Y +R T+ F D++RPE KFK I+ L   + +D K+ + IL
Sbjct: 250 QKHIEAFIFDFNGDLYRKRITIEFIDFIRPERKFKRIDDLISQIKQDIKQIKTIL 304


>gi|314933451|ref|ZP_07840816.1| riboflavin biosynthesis protein RibF [Staphylococcus caprae C87]
 gi|313653601|gb|EFS17358.1| riboflavin biosynthesis protein RibF [Staphylococcus caprae C87]
          Length = 323

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 180/320 (56%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           + V H I+ +Q +  ++    +A G FDG+H GH  + +   + A  NN    V++F+PH
Sbjct: 4   IEVTHPIQKDQLINENV---AMAFGFFDGMHRGHDKVFQALNQKAEENNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + +++E+      I   F+   A+ ++E+FIQ+ ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIEQHDVDYCIVINFSSRFASVTSEEFIQEYVINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+  +   F T  + + +   S+ +S++ IR ALT+G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESND---FKTTIVGK-QELDSEKISTTAIREALTEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++
Sbjct: 176 NLRKANEELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVIVYWHYFLRPEVKFSGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ +A+ +L   +
Sbjct: 296 LVEQMNEDKARAKYLLSVDF 315


>gi|213971064|ref|ZP_03399184.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato T1]
 gi|301384213|ref|ZP_07232631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato Max13]
 gi|302060863|ref|ZP_07252404.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato K40]
 gi|302132872|ref|ZP_07258862.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213924172|gb|EEB57747.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato T1]
 gi|330878963|gb|EGH13112.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966382|gb|EGH66642.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 308

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F    +  SA  F++ VL++ L V+
Sbjct: 59  REFFAPQTAPARLARLRDKLELLSAEGVDRVLCLSFNQRLSKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID LR      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGLR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AAADFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              + GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E L
Sbjct: 232 GKPWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|299823027|ref|ZP_07054913.1| FAD synthetase [Listeria grayi DSM 20601]
 gi|299816556|gb|EFI83794.1| FAD synthetase [Listeria grayi DSM 20601]
          Length = 312

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 169/296 (57%), Gaps = 8/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++  A  IA+ + I   VL+F+PHP  ++ +  +    L+P   
Sbjct: 20  VIALGFFDGVHLGHQAVIRSAKSIADAAGIKTAVLTFDPHPSVVLSKKRNKAKYLTPIEE 79

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +E MG       +FT + +    + F+QK L+    V  ++ G  + +G+  AG  
Sbjct: 80  KARKVEAMGVDYFYVVRFTTKFSELEPKDFVQKYLLPLGAVH-IVAGFDYTYGRLGAGKM 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             ++   E        +D+ +   +Q +SS+ IR A+ +G +  A  LLG  +T +  VI
Sbjct: 139 ADMETYAEN-KLQVTIVDK-QEADNQKISSTAIRQAIEEGSMEEANKLLGEPYTTKGTVI 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ +  D L+ K GVYA++F+  ++T + G+A+ G N T   +  L
Sbjct: 197 HGDKRGRTIGFPTANILVEEDYLIPKLGVYAVKFKIGNET-HLGMASIGYNITFKDDQSL 255

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +E +I DF++EIYG+   + +F Y RPE+KF  +E L   + +DE+  R+  + +
Sbjct: 256 SIEVYILDFNREIYGEEVEIEWFQYFRPELKFSGMEGLIKQLEKDEQDTREYFQKN 311


>gi|150390431|ref|YP_001320480.1| riboflavin biosynthesis protein RibF [Alkaliphilus metalliredigens
           QYMF]
 gi|149950293|gb|ABR48821.1| riboflavin biosynthesis protein RibF [Alkaliphilus metalliredigens
           QYMF]
          Length = 307

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 154/283 (54%), Gaps = 6/283 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+GNFDGIHLGH  ++   IK      +  TV +F  HP T+I        +S  S+++
Sbjct: 18  IALGNFDGIHLGHQRLINTLIKECKEQSLEATVYTFINHPATVISGREMPPQISNLSMKK 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+ + +G   L   +F  E  + S E F++++L++ L  K  + G  +RFG    GD  +
Sbjct: 78  KVFQSLGLDTLFLDEFNKEIMSLSPEAFVEEILIKKLNCKIAVVGFDYRFGYKAQGDVTL 137

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G  +GF  + I+ +  +  +I SSSNIR  +  G +  A   LG  ++I S+VIHG
Sbjct: 138 LKRLGHLHGFQVIEINPVTLDDEKI-SSSNIREFIADGKMNEATKFLGREYSIISEVIHG 196

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +  G  LG+PTAN+ + P  L+ KEGVYA      D + Y G    G NPT   N  + +
Sbjct: 197 KGRGIHLGYPTANLLVHPSHLVPKEGVYATLVEI-DGSVYKGATCVGTNPTFGKN-SISI 254

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E+FI D+   IYG+   V F  Y+R +IKF+  E L   M  D
Sbjct: 255 ETFIIDYVGSIYGKEIEVRFVKYVRDQIKFEKTEDLTNQMKLD 297


>gi|257055500|ref|YP_003133332.1| FMN adenylyltransferase /riboflavin kinase [Saccharomonospora
           viridis DSM 43017]
 gi|256585372|gb|ACU96505.1| FMN adenylyltransferase /riboflavin kinase [Saccharomonospora
           viridis DSM 43017]
          Length = 313

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 17/311 (5%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           LP      VV IG FDG+H GH  ++ Q ++ A     P  VL+F+PHP  +++  S   
Sbjct: 4   LPGDWGRCVVTIGVFDGVHKGHQALISQTVRTARQRGLPSVVLTFDPHPAEVLRPGSHPA 63

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +++E++G   L    FT E +  S E+F+ ++LVE L   TVI G  FRFG
Sbjct: 64  QLTTLTRKAELIEQLGVDVLAVLPFTPELSRLSPEEFVHEILVERLHAATVIVGENFRFG 123

Query: 131 KDRAGDRGILQKRGEKYGF---------HTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
               G    L++ G+++GF         H+V   E   +     SS+ +R+ +  G V+ 
Sbjct: 124 YKARGTVETLRELGKRFGFTAHEATLEGHSV--SENGGSAEITYSSTYVRSCINAGDVVA 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ--DQTSY 238
           AA  LG    +E  V+ GE  GR LGFPTAN+ L     +  +GVYA  F  Q  D+   
Sbjct: 182 AAEALGRPHRLEGIVVRGEGRGRELGFPTANLSLPAFSAVPADGVYACWFVRQGRDEEPL 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
               + G NPT        +E+F+ DF  ++YGQ+  + F   LR +I F   E+L  ++
Sbjct: 242 PAAVSVGTNPTF-SGRERTVEAFVLDFDADLYGQQVALDFVARLRGQIAFDTTEELVRHI 300

Query: 299 GEDEKKARKIL 309
            +D  + R+IL
Sbjct: 301 ADDVARTRQIL 311


>gi|253690015|ref|YP_003019205.1| riboflavin biosynthesis protein RibF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756593|gb|ACT14669.1| riboflavin biosynthesis protein RibF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 313

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 157/306 (51%), Gaps = 3/306 (0%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPI 69
           +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P P  +  +    
Sbjct: 9   NLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQPLELFAAEKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + K L + G   L+  +F    A   AE F+  +LV+ L VK ++ G  FRF
Sbjct: 69  ARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDAETFVSFLLVKKLGVKFLVVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQK G + GF  +  D   N   + VSS+ +R AL++  +  A  LLG+ 
Sbjct: 129 GAGRQGDFLLLQKAGRESGFDVISTDSFCNGGKR-VSSTAVREALSRDELELAESLLGHP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      Q    GVAN G  PT
Sbjct: 188 YCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGQEPLPGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  +    LE  + D + ++YG+   V     +R E +F  ++ LK  + +D   AR   
Sbjct: 248 VNGDKRQQLEVHLLDVTIDLYGRHIEVVLRKKIRNEQRFASLDALKQQIADDVVTARTFF 307

Query: 310 ESSYPL 315
               P+
Sbjct: 308 GLKTPV 313


>gi|268316871|ref|YP_003290590.1| riboflavin biosynthesis protein RibF [Rhodothermus marinus DSM
           4252]
 gi|262334405|gb|ACY48202.1| riboflavin biosynthesis protein RibF [Rhodothermus marinus DSM
           4252]
          Length = 312

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 169/304 (55%), Gaps = 11/304 (3%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLS 73
           H    VV +G FDG+H GH  +L+  +  A   N   TVLSF+PHPR ++++  P+  L+
Sbjct: 12  HDARSVVTVGTFDGVHRGHQAVLQFLMARARERNGVSTVLSFDPHPREVLRAE-PVSLLT 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +LE +G    I   FT E A   A QF++++LV  + ++ +  G    FG++R
Sbjct: 71  TIEERATLLEALGIERFIVLSFTPELAAMPARQFVEEILVRRIGLQAICVGYDHTFGRNR 130

Query: 134 AGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFT 191
            G+  +LQ+ G +YGF   V   ++  +++  VSS+ IRT L + G V  AA LLG  + 
Sbjct: 131 EGNVALLQQLGSQYGFAVDVIPPQVVGDRT--VSSTLIRTILLRDGDVRQAAELLGRPYM 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIR-FRTQDQTSYSGVANFGRNP 248
           +++ V+ G+  GR LGFPTAN+  S P  L+ + GVYA+R +   +     G+ N G  P
Sbjct: 189 LQATVVKGDGRGRVLGFPTANLHPSHPRKLVPRNGVYAVRVWLPGEAEPRGGMMNIGMRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +    LE  + DF  ++YGQ   V F + LR E +F  IE L+  +  D ++  ++
Sbjct: 249 TFAGD-RRTLEVHLLDFEGDLYGQVLRVDFIERLRDERRFPSIEALREQLFRDRQRCMEV 307

Query: 309 LESS 312
           L++S
Sbjct: 308 LQAS 311


>gi|187929795|ref|YP_001900282.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           pickettii 12J]
 gi|187726685|gb|ACD27850.1| riboflavin biosynthesis protein RibF [Ralstonia pickettii 12J]
          Length = 332

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  + ++F++ VLV+ L  + ++
Sbjct: 61  FMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAGQTPDEFVRNVLVDGLHTRWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFAYLQAAGAQFGFEVEQMGSVSESGVRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVAGIFVVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  + +D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHIFDYQANVYGKLVRVEFMKKLRDEARYDSLDALKDAIAQDC 299

Query: 303 KKARKILESSYP 314
             AR+      P
Sbjct: 300 VHARQFFGLPVP 311


>gi|50122798|ref|YP_051965.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613324|emb|CAG76775.1| riboflavin biosynthesis protein ribf [includes: riboflavin kinase;
           FMN adenylyltransferase] [Pectobacterium atrosepticum
           SCRI1043]
          Length = 313

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 156/306 (50%), Gaps = 3/306 (0%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPI 69
           +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P P  +  +    
Sbjct: 9   NLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQPLELFAAEKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + K L + G   L+  +F    A   AE F+  +L + L VK ++ G  FRF
Sbjct: 69  ARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDAETFVSSLLAKKLGVKFLVVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQK G + GF  +  D   N   + VSS+ +R AL++  +  A  LLG+ 
Sbjct: 129 GAGRQGDFLLLQKAGRESGFDVISTDSFCNGGKR-VSSTAVREALSRDELELAESLLGHP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      Q    GVAN G  PT
Sbjct: 188 YCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGQEPLPGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  +    LE  + D + ++YG+   V     +R E +F  ++ LK  + +D   AR   
Sbjct: 248 VNGDKRQQLEVHLLDVTIDLYGRHIEVVLRKKIRNEQRFASLDALKQQIADDVVTARTFF 307

Query: 310 ESSYPL 315
               P+
Sbjct: 308 GLKTPV 313


>gi|302185238|ref|ZP_07261911.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae 642]
          Length = 308

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +      
Sbjct: 173 AASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEING 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  + GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E L
Sbjct: 233 KV-WPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|332532156|ref|ZP_08408039.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038497|gb|EGI74941.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 316

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 169/318 (53%), Gaps = 14/318 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTI 62
           HNI      P+H  G V+ IGNFDG+HLGH  +L+  +    A++ P TV+ F P P+  
Sbjct: 8   HNIR-----PHHF-GCVLTIGNFDGVHLGHAEVLKGLLSDAKAHSLPSTVMLFEPQPQEF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              ++    L+    + ++L  +G   +I   F  + AN  AEQF+  +L++ L VK + 
Sbjct: 62  FAKNNAPARLTRLRDKLRLLSDLGIERVICISFNQQFANMHAEQFVNDILIKKLGVKALT 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F+FGK R G+  +L   G++ G         R   ++ VSS+ IR AL  G + +A
Sbjct: 122 VGDDFKFGKQRQGNFDLLASMGKQAGMDVKSTASFRQLNAR-VSSTLIRDALASGDLASA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  + GVA
Sbjct: 181 KIMLGHDYAISGRVIHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQIF-GVA 239

Query: 243 NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G  PT   NG   LLE  +FDF+Q+IYGQ   V   + LR E KF+ + +L   +  D
Sbjct: 240 NVGNKPTF--NGTRALLEVHLFDFAQDIYGQFMHVELIEKLRDEKKFETLTQLTAQIATD 297

Query: 302 EKKARKILESSYPLSERD 319
              A++    +  +++RD
Sbjct: 298 VAAAKQCFGLN-QVADRD 314


>gi|237747480|ref|ZP_04577960.1| riboflavin biosynthesis protein RibF [Oxalobacter formigenes
           HOxBLS]
 gi|229378831|gb|EEO28922.1| riboflavin biosynthesis protein RibF [Oxalobacter formigenes
           HOxBLS]
          Length = 318

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 10/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR------TIIQSSSPIFTL 72
            + IGNFDG+H GH ++L +  + A+  + P  VL+FNPHPR      T   SS+P  T+
Sbjct: 17  ALTIGNFDGVHKGHMVLLAKLREAADRLHLPAAVLTFNPHPRQYFALKTGTLSSAPA-TI 75

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   + + L +     +   +F    ++ S E+FI+++LV+ L V+ +I G KFRFGK 
Sbjct: 76  TPLREKVQALAQCCVDQVTIARFNNTVSSLSPEEFIEEILVKALNVRWLIIGEKFRFGKG 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G    L++ G+++GFH   +  + +   +I SSS IR AL +      + LLG  + I
Sbjct: 136 RTGTTDELKEAGKRFGFHVEVLPAVMDENGRI-SSSCIRQALEQSDFEKVSGLLGKPYAI 194

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              ++HG+KIGR LGFPTAN+ +     +  GV+  R    ++     V+  G  PT+  
Sbjct: 195 SGHIVHGDKIGRDLGFPTANLPIRHYNPILSGVFITRVHGLEEKPLPSVSMIGTRPTIES 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +  ++LE+ I DF +  YG    V F   LR   KF D+  LK  +  D   AR
Sbjct: 255 DRHIMLETHILDFGRTCYGSLVQVEFLKKLRDNQKFPDLNALKKAIQNDVDTAR 308


>gi|260889681|ref|ZP_05900944.1| riboflavin biosynthesis protein RibF [Leptotrichia hofstadii F0254]
 gi|260860287|gb|EEX74787.1| riboflavin biosynthesis protein RibF [Leptotrichia hofstadii F0254]
          Length = 333

 Score =  168 bits (426), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 163/284 (57%), Gaps = 11/284 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +GNFDG+H+GH +IL +A+K A   N    V +F  +P+      + I T S  +  
Sbjct: 39  IVILGNFDGVHIGHQIILHKAVKQAKEKNLKTIVYTFREYPKN---QQTKITTCSEKAY- 94

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G   L   +F  +  NY+ E+F++KVLV+ L    V  G  F FGK+++G+  
Sbjct: 95  --LLNENGIDYLYLEQFE-KVRNYTPEEFVEKVLVDILNATEVYCGFNFTFGKEKSGNTD 151

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K   +        + + +   +I+SS+ +R  + +G+      LLG+ F I  +VI+
Sbjct: 152 TLEKLLTEKNIKLNVQEPILDENGEIISSTRVRNYIKEGNFEKVRELLGHNFIILGEVIY 211

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GR +GFPTAN++    I  + GVY ++   Q D+  Y+GV N GRNPT V  G L 
Sbjct: 212 GKQLGRVIGFPTANLRFENKIYPEFGVYGVKICIQDDEKVYNGVMNIGRNPT-VDVGVLS 270

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           +E+ IFDF ++IYG+   +   + +R E KF+ +++LK  +G+D
Sbjct: 271 VETNIFDFDEDIYGKVIFIEILENIRHEKKFESVDELKEQIGKD 314


>gi|289662724|ref|ZP_06484305.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 333

 Score =  168 bits (426), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 166/318 (52%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P+   G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
                ++P     PP +   + KI    GF A    +IR+   L  +  SAE F++  LV
Sbjct: 61  EFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMSAEDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R GD  +L   GE++GF    I  +  +  +I S++ IR  
Sbjct: 114 GRLCAREVWIGPEFRFGHRRGGDIRLLHMLGEQHGFVAGEIAPVHLHGERI-SATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GR+LG+PTAN++  P      G+YA      
Sbjct: 173 LVAGEFAHAGDLLGRPYAIGGRVVRGKQLGRSLGYPTANLRF-PRTPALSGIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +T +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E 
Sbjct: 232 AKTPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D  +AR++L +
Sbjct: 291 LTVQMHRDAGQAREVLAA 308


>gi|292670910|ref|ZP_06604336.1| riboflavin biosynthesis protein RibF [Selenomonas noxia ATCC 43541]
 gi|292647531|gb|EFF65503.1| riboflavin biosynthesis protein RibF [Selenomonas noxia ATCC 43541]
          Length = 319

 Score =  168 bits (426), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 15/304 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H+GH  ++  A+K A     T  V SF  HPR +I        +   S++
Sbjct: 18  VIALGMFDGLHIGHQEVIRTAVKKAQEIKGTALVFSFANHPRAVIVPEGAPHRIGCQSVR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL+ +G  AL+   FT   A  +A  FI  +L ++   K ++ G  + FG+   G+  
Sbjct: 78  LRILKNLGVDALVEIAFTSSFAETTANGFIH-LLQQYFAPKYIVVGENYTFGRGGRGNPN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+++  +YGFH +    +       VSS+ IR  L +G + +    LGY FT+   VIH
Sbjct: 137 LLKEQSGRYGFHLIVCPPVLYGGVP-VSSTRIRALLAQGDLSHVNAYLGYPFTVTGTVIH 195

Query: 199 GEKIGRTLGFPTANMQL-----SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           G++ GRTLGFPTAN+ L     SP      GVYA+      + SY GVAN G NPT    
Sbjct: 196 GQERGRTLGFPTANVSLHESYESP----PNGVYAVMV-VHKKHSYHGVANIGNNPTF-GG 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
               LE  I DFS ++Y    TVSFF  +R E +F   ++L I + +D++ A K L+ S+
Sbjct: 250 YDRRLEVHIIDFSGDLYDSEITVSFFFKIRDEQRFSTADELIIQIKKDKEAAIKGLKESF 309

Query: 314 PLSE 317
            L E
Sbjct: 310 RLQE 313


>gi|113868999|ref|YP_727488.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           eutropha H16]
 gi|113527775|emb|CAJ94120.1| FAD Synthase [Ralstonia eutropha H16]
          Length = 381

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 158/312 (50%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 51  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 110

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 111 FTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAAQSPQAFVENVLWHGLHARWVL 170

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ+ G +YGF    +  +     +I SSS +R AL  G + +A
Sbjct: 171 VGDDFRFGARRAGDFTYLQEAGRRYGFDVEQMGSVSEGGIRI-SSSAVRQALADGDLEHA 229

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 230 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVSGIFVVQVHGIADQPLPGVA 289

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G +LLE  +FDF + +YG+   V F   LR E +F ++++L   + +D 
Sbjct: 290 SIGVRPTIEDAGRVLLEVHLFDFKENLYGKLVRVEFMKKLRDEARFDNLDELTAAIAKDS 349

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 350 ADARAFFGLTAP 361


>gi|27363972|ref|NP_759500.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           vulnificus CMCP6]
 gi|27360089|gb|AAO09027.1| riboflavin biosynthesis protein RibF [Vibrio vulnificus CMCP6]
          Length = 311

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 159/310 (51%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI+     P H +G V+ IGNFDG+HLGH  +L Q    A     P  V++F P P  +
Sbjct: 8   HNIK-----PQH-RGCVLTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQPLEL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+  A+ FI+ +LVE L VK ++
Sbjct: 62  FAKEKAPARLTRLRDKFVQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGVKFLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ G+KYGF  V      + +LR      VSS+ IR AL   
Sbjct: 122 VGDDFCFGKARQGNFAMLQEAGKKYGFTVVNTQSFCLAQLR------VSSTAIREALAHD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++    D   
Sbjct: 176 QLAVAAQMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKP 235

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  + LK 
Sbjct: 236 IGGVANIGQRPTV--NGVRQQLEVHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQ 293

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 294 QIELDAEAAR 303


>gi|292489406|ref|YP_003532293.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora CFBP1430]
 gi|292898375|ref|YP_003537744.1| bifunctional riboflavin kinase\FMN adenylyltransferase [Erwinia
           amylovora ATCC 49946]
 gi|291198223|emb|CBJ45329.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Erwinia amylovora ATCC 49946]
 gi|291554840|emb|CBA22712.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora CFBP1430]
 gi|312173571|emb|CBX81825.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora ATCC BAA-2158]
          Length = 312

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 153/292 (52%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L Q          P+ V+ F P P  +  +      L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLAQLCAEGRQRHLPVVVMLFEPQPLEMFAAEKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + LE+ G  A++   F    A +SA++FI  +LV+ L V+ +  G  FRFG  R G
Sbjct: 75  REKLRYLEQAGVDAVLCIGFDRHFAAHSAQRFITDLLVKKLRVQLLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF+ +      +   +I SS+ +R AL +  +  A  LLG  F+I   
Sbjct: 135 DFLLLQKAGVEYGFNVISTQTFCDGGKRI-SSTAVRQALAEDDLPLAQSLLGRPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRTLGFPTAN+ L   +   +GVYA+      + +  GVAN G  PT V    
Sbjct: 194 VVHGDALGRTLGFPTANLPLRRTVSPVKGVYAVEVLGLGERALPGVANIGTRPT-VAGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V   D +R E +F  ++ LK  +  D   AR+
Sbjct: 253 QQLEVHLLDVAIDLYGRHIEVVLLDKIRDEQRFTSLDALKEQIANDVVTARR 304


>gi|87125479|ref|ZP_01081324.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9917]
 gi|86166779|gb|EAQ68041.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9917]
          Length = 308

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 4/293 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  +++           +V+SF PHPR ++    P   L  PS +  
Sbjct: 15  ALALGSFDGLHAGHRRVIDAVCGDPCGGLPSVVSFWPHPREVLHGE-PRLRLDLPSEKVD 73

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE +G   L+   F  + A   AE F+ +VL+  L+ + +  G  FRFG+DR GD   L
Sbjct: 74  LLEPLGIEQLVLVPFDQQLAGLQAEDFVDQVLLTTLQARHIAVGANFRFGRDRTGDTDTL 133

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++  E+ G     +  L ++  ++ SSS IR AL  G +  A+ LLG  +     V+ G 
Sbjct: 134 RRLCERAGVRVSVLPILEDDGGRM-SSSRIRAALGAGDLARASALLGRAYRFSGRVVRGR 192

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLLL 258
            +GR LG+PTAN+Q+     L   GVYA     QD+      V N G  PT+ P  P  +
Sbjct: 193 GLGRELGWPTANLQVDGRKFLPGLGVYAAWAFLQDKGERLPAVMNLGPQPTVDPTSPSAV 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E  + D   E+ G+  TV   + LR + +F  +E+L   +G D ++AR  L++
Sbjct: 253 EVHLLDTRLELEGRELTVEPVERLRGQQRFSGLEELSAQIGLDAQRARLRLQA 305


>gi|262274902|ref|ZP_06052713.1| riboflavin kinase/FMN adenylyltransferase [Grimontia hollisae CIP
           101886]
 gi|262221465|gb|EEY72779.1| riboflavin kinase/FMN adenylyltransferase [Grimontia hollisae CIP
           101886]
          Length = 313

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 153/296 (51%), Gaps = 7/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+HLGH  +L + ++ A     P TV+ F P PR +         L+  
Sbjct: 15  RGCVLTIGNFDGVHLGHQEVLRRVVEKAGELGLPPTVMLFEPQPRELFAGEKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L K+G   L+   F  + A  +   F+ ++L E L VK ++ G  FRFG  R G
Sbjct: 75  RDKYVQLAKLGVERLVMVNFNAKFAAITPHDFVHRLLAEQLGVKFLVVGDDFRFGARRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ +    GF  V  D    ++ Q VSS+ IR  L  G    A  +LG  ++I   
Sbjct: 135 DFSYLQSQAVLAGFEVVSTDSFTVSE-QRVSSTAIREVLAAGQQYEAEQMLGRPYSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNG 254
           V HG+K+GRT+GFPTAN+ L   +    GVY +R    +   +  GVAN G  PT+  NG
Sbjct: 194 VSHGKKLGRTIGFPTANVPLKRRVSPVSGVYVVRVGGIESGQWLGGVANVGTRPTV--NG 251

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LE  +FD  +++YG++  V     LR E+KF  +++LK  +  D + AR  L
Sbjct: 252 VRQQLEVHLFDLEKDLYGRQIEVQLLHKLRDEMKFSSLDELKAQIEIDAQTARAWL 307


>gi|254519180|ref|ZP_05131236.1| riboflavin biosynthesis protein RibF [Clostridium sp. 7_2_43FAA]
 gi|226912929|gb|EEH98130.1| riboflavin biosynthesis protein RibF [Clostridium sp. 7_2_43FAA]
          Length = 307

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 166/289 (57%), Gaps = 9/289 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H GH  ++++ +++A   N    V ++  HP+T+++  S    +     + 
Sbjct: 18  VALGSFDGLHSGHLSLVKKTVQVAKEKNGKSMVFTYKNHPKTLVKPESAPKLIMDLETKL 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K LE+     ++   FT E  + SAE FI+ + V++  VK +I G  FRFG    GD  +
Sbjct: 78  KYLEEENVDIVVLRSFTKEFMSVSAEDFIKLLCVDY-NVKGIIVGFNFRFGYKNLGDVKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    KYG+  +++ E       ++SS+ IR ++ +G V  A+ +L   + I+  VIHG
Sbjct: 137 LEDLQGKYGYK-LYVMEPYTYNGDVISSTRIRKSILEGDVKEASKMLSKPYLIKGKVIHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           +K+GRT+GFPTAN++    I++  +GVY       ++T Y G+ + G NPT+  NG  L 
Sbjct: 196 KKLGRTIGFPTANLEFDSKIIIPDKGVYYTNVEYNNKT-YKGITSVGYNPTV--NGQQLT 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E++I DF   IYGQ   V F + +R EIKF  +++L   + +DE  A+
Sbjct: 253 IETYILDFDDTIYGQELKVYFIERIREEIKFNSLDELVKQIKKDENFAK 301


>gi|218886854|ref|YP_002436175.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757808|gb|ACL08707.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 314

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 16/302 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V +GNFDG+H GH  ++ + +  A     P  V++F PHP  ++         +PP
Sbjct: 16  RGSCVTVGNFDGVHNGHRKLIGRVMAKAAALGVPSVVVTFCPHPLRVLVGPH-----TPP 70

Query: 76  SIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            I +      + E +G    +  +FT E A    E+F+++VLV+ L  + ++ G  F  G
Sbjct: 71  LITDYEKKLDLFEALGVDLTLMLRFTREMAAQEPEEFVRRVLVDALHTRELVIGYDFSLG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G+  +LQ+ G++YGF T  +D +  N + +VSS+ IR  +  G V +   L+   +
Sbjct: 131 KGRKGNFELLQRLGKQYGFATEQLDPVIINDA-VVSSTRIRDLIRAGDVWDVRPLMDRFY 189

Query: 191 TIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            I   V+ G ++ G+ LGFPTANM+   +++ K GVYA       Q  Y GV N G NPT
Sbjct: 190 AIRGKVVRGMDRGGKLLGFPTANMEPRDELMPKPGVYATWVLIDGQV-YQGVTNVGFNPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              N  L +E+ I DF ++IYG    VSF   LR E KF  +++L   +  D   AR+IL
Sbjct: 249 F-DNARLSVETHILDFDRDIYGWEIRVSFVHRLRDERKFSGLDELVTQIRRDVDLARQIL 307

Query: 310 ES 311
            +
Sbjct: 308 SA 309


>gi|148273325|ref|YP_001222886.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831255|emb|CAN02211.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 310

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V H+      +P       V IG FDG+H GH  ++ + + IA +  ++  V++F+ H
Sbjct: 1   MLVVHD---PAGVPGGFGPSAVTIGKFDGVHAGHRAVIRRLLGIAADEGLSSAVVTFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  ++   +L     + ++L ++G  A +   F       S E+F++ VLV+ L  
Sbjct: 58  PAALLAPAARPQSLVSNRQKIELLAELGVDATLMLPFDERLQRLSPEEFVRTVLVDALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AGD   L + GE +GF TV + ++  + S+ VSS+ IR  + +G 
Sbjct: 118 RVVLVGEDFRFGAQGAGDAATLTRLGEAHGFRTVVVGDVMPDGSRKVSSTWIRDLMDRGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQ 235
           V  AA LLG    +  DV+HGEK GR LGFPTAN  LSP+   ++  +GVYA   R  D+
Sbjct: 178 VEAAAELLGRAPAVRGDVVHGEKRGRELGFPTAN--LSPEAEGLIPADGVYAGWLRDGDR 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y    + G NPT     P ++E+F+ D + ++Y     V F   +R  + ++  E L 
Sbjct: 236 T-YPSAISVGTNPTFAGVRPRVVEAFVLDETLDLYDHEVEVVFVARIRGMVAYEGREPLI 294

Query: 296 IYMGEDEKKARKIL 309
             M +D  + R +L
Sbjct: 295 AQMTDDVVRTRGVL 308


>gi|37678870|ref|NP_933479.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           vulnificus YJ016]
 gi|37197611|dbj|BAC93450.1| FAD synthase [Vibrio vulnificus YJ016]
          Length = 326

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 159/310 (51%), Gaps = 22/310 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           HNI+     P H +G V+ IGNFDG+HLGH  +L Q    A     P  V++F P P  +
Sbjct: 23  HNIK-----PQH-RGCVLTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQPLEL 76

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+    +   L K+    L+   F    A+  A+ FI+ +LVE L VK ++
Sbjct: 77  FAKEKAPARLTRLRDKFVQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGVKFLV 136

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKG 177
            G  F FGK R G+  +LQ+ G+KYGF  V      + +LR      VSS+ IR AL   
Sbjct: 137 VGDDFCFGKARQGNFAMLQEAGKKYGFTVVNTQSFCLAQLR------VSSTAIREALAHD 190

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++    D   
Sbjct: 191 QLAVAAQMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKP 250

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             GVAN G+ PT+  NG    LE  +FDF   +YG++  V     LR E KF+  + LK 
Sbjct: 251 IGGVANIGQRPTV--NGVRQQLEVHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQ 308

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 309 QIELDAEAAR 318


>gi|194290605|ref|YP_002006512.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224440|emb|CAQ70451.1| bifunctional: flavokinase; FAD synthetase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 385

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 5/304 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 51  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 110

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  S ++F++ VL   L  + ++
Sbjct: 111 FTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAGQSPQEFVENVLWHGLHTRWLL 170

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ+ G +YGF    +  +     +I SSS +R AL  G + +A
Sbjct: 171 VGDDFRFGAKRAGDFAYLQEAGRRYGFDVEQMGSVSEGGIRI-SSSAVRQALADGDLEHA 229

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 230 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVSGIFVVQVHGIADHPLPGVA 289

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G +LLE  +FDF++ +YG+   V F   LR E +F  +++L   + +D 
Sbjct: 290 SIGVRPTIEDAGRVLLEVHLFDFNESLYGKLVRVEFMKKLRDEARFDSLDELTAAIAKDS 349

Query: 303 KKAR 306
             AR
Sbjct: 350 ADAR 353


>gi|26987339|ref|NP_742764.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida KT2440]
 gi|24981990|gb|AAN66228.1|AE016251_4 riboflavin biosynthesis protein RibF [Pseudomonas putida KT2440]
          Length = 316

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 154/303 (50%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVIFEP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L 
Sbjct: 57  QPREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNQRLSKLSADAFVKAILVDGLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G  YGF     +TV  D LR      VSS+ +R 
Sbjct: 117 VRHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTVIQDGLR------VSSTEVRK 170

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G    A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 171 ALSEGDFELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASI-V 229

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E
Sbjct: 230 IDGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLE 289

Query: 293 KLK 295
            LK
Sbjct: 290 ALK 292


>gi|317125346|ref|YP_004099458.1| riboflavin kinase; FMN adenylyltransferase [Intrasporangium calvum
           DSM 43043]
 gi|315589434|gb|ADU48731.1| riboflavin kinase; FMN adenylyltransferase [Intrasporangium calvum
           DSM 43043]
          Length = 323

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 177/321 (55%), Gaps = 23/321 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN---SPITVLSFNPHPRTIIQ-SS 66
           + +P+ L   VV +GNFDG+H GH  +L + ++ A     +P+ V +F PHP T++    
Sbjct: 8   EDIPSDLGPTVVTLGNFDGVHRGHREVLGRVVREARERGATPVAV-TFEPHPVTVLHPER 66

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +P   +S   +++++  LE +G  A++   FT E A  + E+F+++  V+ L    V+ G
Sbjct: 67  APAMVMS---VEQRLDALESVGLGAVLVLNFTREFAQQTPEEFVERTFVDGLHAVAVVVG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNA 182
              RFG   +GD G L + GEK+GF  + +D++   +++ +  SS+ +R  +  G V +A
Sbjct: 124 RDTRFGVRNSGDVGTLTELGEKHGFEVIALDDIGEASHEGRRWSSTQLRAEILDGKVSHA 183

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYA---IRFRTQ----D 234
           + +LG    +   V+HG+  GR LGFPTAN+ Q    ++  +GVYA   IR        D
Sbjct: 184 SEILGRPHRVTGTVVHGDHRGRELGFPTANLSQDHEGLVPSDGVYAGWLIRLDLDTGAVD 243

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +T  + + + G NPT        +E+++ D +  ++YG+R  V F  +LRP ++F  IE 
Sbjct: 244 RTLPAAI-SVGTNPTF-DGHQRRVEAYVLDRTDLDLYGERVAVDFVSHLRPTLRFDSIEG 301

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L   M ED  + R+IL +  P
Sbjct: 302 LVTQMREDVARCREILSAIVP 322


>gi|261363879|ref|ZP_05976762.1| riboflavin biosynthesis protein RibF [Neisseria mucosa ATCC 25996]
 gi|288567874|gb|EFC89434.1| riboflavin biosynthesis protein RibF [Neisseria mucosa ATCC 25996]
          Length = 309

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 166/308 (53%), Gaps = 19/308 (6%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS---P 68
           P+  +G  V IGNFDG+HLGH  IL++  + A+    P+ V+ F P P+      +    
Sbjct: 11  PDFPQGSAVTIGNFDGVHLGHKHILQKLKQEADARGLPVVVVIFEPQPKEFFARQTGKKQ 70

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            + +SP   +  +LE+ G   A+   +F    A+  A+ FI  +L + L  + ++ G  F
Sbjct: 71  PYRISPLRTKLNLLEQTGCVDAVWVLRFNQTFADMDAQDFINLLLRKTLNTRYLLIGDDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R GD  +L  + +     T  V ++++R       SS+ +R AL++G +  A  L
Sbjct: 131 RFGAGRRGDFELLATQPDIQTDRTPSVIVEDIR------TSSTAVRNALSEGRLDYAKKL 184

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT--SYSGVAN 243
           LG+ +T+   V HG+K+GRT+  PTAN+QL P      GV+ +     D T  +  GVA+
Sbjct: 185 LGHDYTLSGKVKHGKKLGRTINAPTANIQLPPHHYALSGVFVVEV---DGTFGTKRGVAS 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           FG NPT+  N    LE  +FDF++ IYGQR  V F   LR E KF  I +LK+ + +D K
Sbjct: 242 FGFNPTVSNNRVQKLEVHLFDFNENIYGQRLNVRFLHKLRDEKKFDSIAELKVQIEQDMK 301

Query: 304 KARKILES 311
            AR   E+
Sbjct: 302 NARHWSET 309


>gi|148545893|ref|YP_001265995.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida F1]
 gi|148509951|gb|ABQ76811.1| riboflavin kinase / FMN adenylyltransferase [Pseudomonas putida F1]
          Length = 322

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 155/303 (51%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 13  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVIFEP 62

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L 
Sbjct: 63  QPREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNHRLSKLSADAFVKAILVDGLG 122

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G  YGF     +TV  D LR      VSS+ +R 
Sbjct: 123 VRHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTVIQDGLR------VSSTEVRK 176

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G+   A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 177 ALSEGNFELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASI-V 235

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E
Sbjct: 236 IDGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLE 295

Query: 293 KLK 295
            LK
Sbjct: 296 ALK 298


>gi|307244375|ref|ZP_07526488.1| riboflavin biosynthesis protein RibF [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492276|gb|EFM64316.1| riboflavin biosynthesis protein RibF [Peptostreptococcus stomatis
           DSM 17678]
          Length = 323

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 158/296 (53%), Gaps = 21/296 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+H+GH  ++ + +K A    +   V +F+ HP    +   P +  +  S ++
Sbjct: 18  VTIGNFDGVHMGHQELISKTVKYAKKKRLKSVVFTFSNHPVNFFK---PGYVKNIISQEQ 74

Query: 80  K--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           K  ++EK+G    +   F +     SA  +++K+LV+ L +K VI G  F F + + G+ 
Sbjct: 75  KQALIEKLGVDVYVNIPFDITMTQISARDYVKKILVDKLRIKKVIVGHDFSFARKKEGNP 134

Query: 138 GILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             L   G++Y F       V +D  R      VSS++IRT ++ G V  A  LLG  + I
Sbjct: 135 EKLIDFGKEYNFEVEIVTPVLLDGKR------VSSTDIRTLISNGDVAGAKKLLGQYYCI 188

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  V+ G +IGRT+GFPTAN+     +++ + G+YA    T D   Y G  N G NPT V
Sbjct: 189 EGIVVEGRQIGRTIGFPTANIDYDKSMVIPRMGIYA-SLATVDGNVYCGATNIGTNPT-V 246

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               + +E++I DF Q IYG+   V F +++R E+KFK  E L   + ED    R+
Sbjct: 247 HGKKVTIETYILDFDQMIYGKELKVEFVEHMRDEVKFKSKEDLMNQLKEDVAYVRE 302


>gi|188992579|ref|YP_001904589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167734339|emb|CAP52549.1| Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Xanthomonas campestris pv.
           campestris]
          Length = 362

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 165/318 (51%), Gaps = 22/318 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P+   G VV IG FDG+HLGH  ++  A++ A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHQALVRHAVERARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFIQKVLV 113
               + +P     PP +   + KI    GF A    +IR+   L     SA+ F++  LV
Sbjct: 61  EFFANDTP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRLSA--MSAQDFVRLALV 113

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V  G +FRFG  R GD  +L+  GE++GF    I  + + + + +S++ IR  
Sbjct: 114 GRLCAREVWIGPEFRFGHRRGGDIALLRALGEQHGFAAGEIAPV-HLRGERISATRIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G   +A  LLG  + I   V+ G+++GRTLG+PTAN++ +    L  G+YA      
Sbjct: 173 LVAGEFAHAGELLGRPYAIGGRVVRGKQLGRTLGYPTANLRFARTPALS-GIYATWVHGV 231

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               +  V++FG  PT+    P LLE+ +FDF   +YG+   V F   LR E KF  +E 
Sbjct: 232 AAHPWPSVSSFGTRPTVAGIEP-LLEAHLFDFQGNLYGRHIAVEFVAKLRDEEKFDGLEA 290

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D ++AR +L +
Sbjct: 291 LTVQMHRDAEQARAVLAA 308


>gi|153207903|ref|ZP_01946480.1| riboflavin biosynthesis protein RibF [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161831021|ref|YP_001596334.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 331]
 gi|165918822|ref|ZP_02218908.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 334]
 gi|120576329|gb|EAX32953.1| riboflavin biosynthesis protein RibF [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161762888|gb|ABX78530.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 331]
 gi|165917454|gb|EDR36058.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 334]
          Length = 320

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 159/309 (51%), Gaps = 15/309 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P P+    
Sbjct: 4   IRGKHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKLPTVVIIFEPQPKEFFA 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSA-----LIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                  L     +EK L   GF+      L+  +F    A+ +AE F++++LV+ L  K
Sbjct: 64  KGQTEARLM--RFREKWL---GFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGAK 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G +
Sbjct: 119 AVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGDM 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
                LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY 
Sbjct: 178 AVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVR-AFLNKKSYR 236

Query: 240 GVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   M
Sbjct: 237 GVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQM 296

Query: 299 GEDEKKARK 307
             D  +A K
Sbjct: 297 HRDVIEAEK 305


>gi|262395189|ref|YP_003287043.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. Ex25]
 gi|262338783|gb|ACY52578.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. Ex25]
          Length = 294

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 156/294 (53%), Gaps = 16/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+Q  + A+  + P  V++F P P  +         L+    +
Sbjct: 1   MLTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQPMELFAKDKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              L K+    L+   F    A+ +AE+FI+ +LVE L VK ++ G  F FGK R G+  
Sbjct: 61  FVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLVVGDDFCFGKGRTGNFA 120

Query: 139 ILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +LQ+ GEKYGF  V      + +LR      VSS+ IR AL +  + +A  +LG  ++I 
Sbjct: 121 MLQEAGEKYGFDVVSTQSFCLQQLR------VSSTAIRQALARDDLHSAQQMLGRNYSIS 174

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+  N
Sbjct: 175 GRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKPVGGVANIGQRPTV--N 232

Query: 254 G-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           G    LE  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR
Sbjct: 233 GVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAAR 286


>gi|212213112|ref|YP_002304048.1| FMN adenylyltransferase [Coxiella burnetii CbuG_Q212]
 gi|212219169|ref|YP_002305956.1| FMN adenylyltransferase [Coxiella burnetii CbuK_Q154]
 gi|215918958|ref|NP_819430.2| FMN adenylyltransferase [Coxiella burnetii RSA 493]
 gi|206583843|gb|AAO89944.2| riboflavin kinase [Coxiella burnetii RSA 493]
 gi|212011522|gb|ACJ18903.1| riboflavin kinase [Coxiella burnetii CbuG_Q212]
 gi|212013431|gb|ACJ20811.1| riboflavin kinase [Coxiella burnetii CbuK_Q154]
          Length = 345

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 159/309 (51%), Gaps = 15/309 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P P+    
Sbjct: 29  IRGKHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKLPTVVIIFEPQPKEFFA 88

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSA-----LIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                  L     +EK L   GF+      L+  +F    A+ +AE F++++LV+ L  K
Sbjct: 89  KGQTEARLM--RFREKWL---GFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGAK 143

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G +
Sbjct: 144 AVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGDM 202

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
                LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY 
Sbjct: 203 AVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVR-AFLNKKSYR 261

Query: 240 GVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   M
Sbjct: 262 GVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQM 321

Query: 299 GEDEKKARK 307
             D  +A K
Sbjct: 322 HRDVIEAEK 330


>gi|209364146|ref|YP_001425011.2| FMN adenylyltransferase [Coxiella burnetii Dugway 5J108-111]
 gi|207082079|gb|ABS77883.2| riboflavin kinase [Coxiella burnetii Dugway 5J108-111]
          Length = 345

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 159/309 (51%), Gaps = 15/309 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ 64
           I    +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P P+    
Sbjct: 29  IRGKHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKIPTVVIIFEPQPKEFFA 88

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSA-----LIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                  L     +EK L   GF+      L+  +F    A+ +AE F++++LV+ L  K
Sbjct: 89  KGQTEARLM--RFREKWL---GFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGAK 143

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G +
Sbjct: 144 AVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGDM 202

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
                LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY 
Sbjct: 203 AVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVR-AFLNKKSYR 261

Query: 240 GVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   M
Sbjct: 262 GVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQM 321

Query: 299 GEDEKKARK 307
             D  +A K
Sbjct: 322 HRDVIEAEK 330


>gi|330961576|gb|EGH61836.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 308

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GLPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLGAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AAADFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E L
Sbjct: 232 GKAWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|300690678|ref|YP_003751673.1| riboflavin biosynthesis protein ribF [includes: riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum PSI07]
 gi|299077738|emb|CBJ50376.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum PSI07]
          Length = 332

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 163/312 (52%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  + ++F++ VLV+ L  + ++
Sbjct: 61  FMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPQEFVRNVLVDGLHARWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFTYLQAAGAQFGFEVEQMGSVSESGIRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVSGIFIVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  +FDF   +YG+   V F   LR E +F  ++ LK  + +D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAIAKDC 299

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 300 VDARHFFGLALP 311


>gi|188532858|ref|YP_001906655.1| Riboflavin biosynthesis protein [Erwinia tasmaniensis Et1/99]
 gi|188027900|emb|CAO95757.1| Riboflavin biosynthesis protein [Erwinia tasmaniensis Et1/99]
          Length = 312

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 154/297 (51%), Gaps = 4/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L Q  A     N P+ V+ F P P  +  +      L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHLALLAQLCAEGRERNLPVMVMLFEPQPLELFAAEKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + LE+ G  A++   F    A YSA++FI  +LV  L V+ +  G  FRFG  R G
Sbjct: 75  REKLRYLEQAGVDAVLCVSFDRHFAAYSAQRFITDLLVNRLGVQLLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF  +      +N  +I SS+ +R AL + ++  A  LLG  F+I   
Sbjct: 135 DFLLLQKAGVEYGFDVISTQTFCDNGKRI-SSTAVRQALAEDNLPLARSLLGRPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRT+GFPTAN+ L   +   +GVYA+        +  GVAN G  PT V    
Sbjct: 194 VVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGPRALPGVANIGTRPT-VAGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LE  + D + ++Y +   V   D +R E +F  ++ LK  +  D   AR+    S
Sbjct: 253 QQLEVHLLDVTIDLYERHIEVVLLDKIRDEQRFNSLDALKEQIANDVVTARRFFGQS 309


>gi|85712276|ref|ZP_01043327.1| FAD synthase [Idiomarina baltica OS145]
 gi|85693903|gb|EAQ31850.1| FAD synthase [Idiomarina baltica OS145]
          Length = 317

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L Q  A   A      V++F P P+ I Q       L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQAVLAQVKAQARALGVAAAVMTFEPQPQEIFQPEKAPARLTNWR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L        +  +F  + A+    +FI+ VLVE L VK ++ G  FRFG  R GD
Sbjct: 76  EKYLALRDQQIDRHLVIEFNRKFASQPPIEFIENVLVEKLGVKFLVVGDDFRFGYKREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G++ GF  V     R  + + VSS+ IR AL +G    A  +LG  + +   +
Sbjct: 136 FALLQREGKRLGFEVVDTRSYRQQQLR-VSSTAIRAALAEGDFERAESMLGRPYQMMGKI 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF----------RTQDQTSYSGVANFGR 246
           +HG K GRT+GFPTAN+ L        GV+A++            ++ + +Y GVAN G 
Sbjct: 195 VHGRKNGRTIGFPTANIPLKRLKSPLHGVFAVKINVGRALGATTNSRAEGTYHGVANLGT 254

Query: 247 NPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  NG  + LE  +FDFS  +YGQ  TV+    LR E +F  +E LK  + +D  +A
Sbjct: 255 RPTL--NGDEVQLEVHLFDFSGNLYGQHATVTPVAKLRSEQRFASLEHLKQQIEKDAARA 312

Query: 306 RKIL 309
           R +L
Sbjct: 313 RALL 316


>gi|288929726|ref|ZP_06423569.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288328827|gb|EFC67415.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 304

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 7/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++    ++A     P  V++F  HPR ++Q+S     LS P  +
Sbjct: 10  VATIGFFDGVHLGHRYLISHVRQLAQGQGMPSMVVTFGTHPRQVVQTSFVPKLLSTPEEK 69

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +K+L + G    +   F    A  +A +F+Q+VL E L V  ++ G   +FG +R     
Sbjct: 70  QKLLCETGIDHTMVLNFDQNMATLTAREFMQRVLKERLNVGQLVIGYDNKFGHNREEGFE 129

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + GE  G   V   +   +    VSSS IRT L +G V  A  LLGY +++   V+ 
Sbjct: 130 DYCRYGEMLGIQVVEAPQFEPDGVH-VSSSAIRTHLLEGRVKQANALLGYAYSLGGKVVP 188

Query: 199 GEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           G + GR +GFPTAN+ + +P  LL + GVYA     +  +    G+ N G  PT    G 
Sbjct: 189 GFQEGRKMGFPTANLLVENPQKLLPQNGVYATWVEVEGHEHPLMGMTNIGNRPTFNGKG- 247

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E+ I DFS +IYGQ   ++F D +R E+KF  I++LK  M EDE+ AR+++++
Sbjct: 248 VTIETNILDFSADIYGQNMRIAFVDRIRAEVKFDTIDQLKAKMKEDEEVARRLVQN 303


>gi|299065946|emb|CBJ37127.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum CMR15]
          Length = 332

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 163/312 (52%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  + ++F++ VLV+ L  + ++
Sbjct: 61  FMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPQEFVRNVLVDGLHARWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFTYLQTAGAQFGFEVEQMGSVSESGIRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  +FDF   +YG+   V F   LR E +F  ++ LK  + +D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAIAKDC 299

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 300 VDARHFFGLAIP 311


>gi|295094749|emb|CBK83840.1| riboflavin kinase/FMN adenylyltransferase [Coprococcus sp. ART55/1]
          Length = 323

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 165/303 (54%), Gaps = 21/303 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VA+G FDGIH GH L++EQ +K+     +  V +F+     +   S+ + T+     + +
Sbjct: 20  VALGKFDGIHQGHMLLIEQVLKLQRQGYMGVVFTFDMRENHVFDVSN-MKTIYTSDEKAQ 78

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++   G   L+ Y F    A    + FI+ VLV+ +    V+ G+ +RFG+DR GD   L
Sbjct: 79  VVSDTGVDVLVEYPFDDAFAATEPKAFIRDVLVDMMRAGYVVVGSDYRFGRDRKGDVDTL 138

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   ++YG+  + ID+L  +  ++VSS+ IR  +++G V +   +LG  +++  +V+ G+
Sbjct: 139 RSYADEYGYKVIVIDKLEQD-DEVVSSTVIRKNISEGDVRSVIPMLGRPYSMTGEVVSGK 197

Query: 201 KIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRT--------QDQ-TSYSGVANFGR 246
           ++GRT+G PTANM     +L P      GVYA R R         +D    Y G+ N G 
Sbjct: 198 QLGRTIGIPTANMLPEERKLYP----PAGVYASRIRIIRGKHTGHEDPFRVYMGITNIGD 253

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT+   G + +E+ IF F + IYGQ   V   + +R E KF  +++LK  M  D + ++
Sbjct: 254 NPTVNDKGNITIETNIFGFDRNIYGQVIKVELIEQIRGEKKFGSLDELKAQMANDIETSK 313

Query: 307 KIL 309
           +IL
Sbjct: 314 RIL 316


>gi|302343157|ref|YP_003807686.1| riboflavin biosynthesis protein RibF [Desulfarculus baarsii DSM
           2075]
 gi|301639770|gb|ADK85092.1| riboflavin biosynthesis protein RibF [Desulfarculus baarsii DSM
           2075]
          Length = 316

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 167/314 (53%), Gaps = 11/314 (3%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQS 65
           E+ Q  P+     VV IGNFDG+HLGH  +  +A +  +A       ++F PHP  +++ 
Sbjct: 9   ELRQKYPSP----VVTIGNFDGVHLGHQALFAKARERALALGGASLAMTFEPHPMRVLRP 64

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +  +  ++P   + +++E  G    +  +F    A  SA+ F+ K+LV  L    V+ G 
Sbjct: 65  AVNLPLITPLEQKLQLIEAQGVDVALCVQFDAGFAALSADDFVDKLLVARLRAAEVVVGY 124

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG    GD  +LQ++G ++GF    +  +  +  + VSS+ +R  +  GH+  A  L
Sbjct: 125 DFSFGHRGLGDLELLQQKGAQHGFAVHVVGPVLVD-GRAVSSTRVRQEVGAGHLAEARKL 183

Query: 186 LGYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LG  + I   V+ G   G + +GF TAN+++S ++L  EGVYA+  +      + GV N 
Sbjct: 184 LGRNYRIAGTVVSGHGRGAKVVGFATANIKVSDELLPAEGVYAVLVQDDQGKLHKGVTNI 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT   +  L +E+ + D+  ++YG+   V F +YLR E KF   ++LK  + +D ++
Sbjct: 244 GNNPTFA-DAQLSVETHLLDYHGDLYGKHIVVIFIEYLRGEQKFASADELKAQIAKDIQR 302

Query: 305 ARKILESSYPLSER 318
           A  +L+    LS R
Sbjct: 303 AHCVLDQD--LSRR 314


>gi|291536074|emb|CBL09186.1| riboflavin kinase/FMN adenylyltransferase [Roseburia intestinalis
           M50/1]
          Length = 309

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 162/297 (54%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPSIQ 78
           V+++G FDGIH GH L++E  A K        + +FN  PR ++ Q  + + T +   + 
Sbjct: 17  VLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEAKVLTTNEEKMH 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD  
Sbjct: 77  --IFEQIGIDYLVECPFTREIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGDYH 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   +KYG+  + I++++ +K  I SS+ +R  + KG++  A HLLGY + +  +++H
Sbjct: 134 MLKDLSDKYGYEVLVINKMQEDKRDI-SSTFVREEIAKGNIEKANHLLGYHYFVTGEILH 192

Query: 199 GEKIGRT-LGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G  +G T LG PT N Q+ P+  +L + GVY    R  D+ S  GV N G  PT+    P
Sbjct: 193 GRHLGSTKLGIPTIN-QIPPEEKLLPESGVYVTEVRLGDR-SCRGVTNVGVKPTIEGKNP 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 251 VGVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|288870955|ref|ZP_06115906.2| riboflavin biosynthesis protein RibF [Clostridium hathewayi DSM
           13479]
 gi|288865264|gb|EFC97562.1| riboflavin biosynthesis protein RibF [Clostridium hathewayi DSM
           13479]
          Length = 319

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 160/296 (54%), Gaps = 9/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IG FDG H GH  +L+Q +++     +   V +F+  P +++       T+   +++
Sbjct: 18  VVTIGKFDGRHRGHQKLLKQMLEVKAERGLKTAVFTFDMTPGSLVAGKQQ--TVITTNLE 75

Query: 79  EKI-LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            +  LEK+G   L+ Y FT ETA+ + E F++ +LV  +  + ++ GT   FG   AG+ 
Sbjct: 76  RRNNLEKIGIDYLVEYPFTEETAHMAPEDFVRDILVSRMHARVIVVGTDCSFGYKGAGNA 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+    KYG+  + I + R++   I SS+ +R  L  G+++ A  LLG  + I   V+
Sbjct: 136 DCLEAWKAKYGYELIVIRKERDDNRDI-SSTYVREELDAGNIVKANELLGEPYAIHGTVV 194

Query: 198 HGEKIGRT-LGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HG  IG + LGFPTAN+   P+  L   GVY  +   +  T Y GV N GR PT+    P
Sbjct: 195 HGNHIGGSVLGFPTANILPPPEKHLPAFGVYVSKVYVEG-TYYGGVTNIGRKPTVSGESP 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +  E+F++   Q+IYG+   V    ++RPE KF  +E+LK  +G D   A   L++
Sbjct: 254 VGAETFLYGIDQDIYGKNIEVQLLSFIRPEKKFDGLEQLKAQIGRDRDYALAYLKN 309


>gi|295677442|ref|YP_003605966.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1002]
 gi|295437285|gb|ADG16455.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1002]
          Length = 349

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 155/309 (50%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L      AN    P+ V++F PHPR  
Sbjct: 19  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAANARGLPVCVMTFEPHPREF 78

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 79  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 133

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L++ G+ YGF    +  + +     +SSS +R AL  G
Sbjct: 134 ARWVMIGDDFRYGAKRAGDFASLREAGKHYGFEVEQMATVADPSGARISSSGVRAALVAG 193

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A   LG  + I   V HG K+GR LGFPT N+ ++       G++ ++    D+  
Sbjct: 194 DLDSARAALGRDYLISGHVTHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGIDEHP 253

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 254 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLETLTAA 313

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 314 IARDVANAR 322


>gi|149182495|ref|ZP_01860969.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. SG-1]
 gi|148849826|gb|EDL64002.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. SG-1]
          Length = 315

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 168/294 (57%), Gaps = 18/294 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII-QSSSPIFTLSPPSIQ 78
           +A+G FDG+H GH  ++  A+  A   N    V++F+PHP  ++ +    +  ++P   +
Sbjct: 21  MALGYFDGVHKGHQKVINTAVMEAEKRNLNSAVMTFDPHPSVVLGRKHKHVHYITPLQDK 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++E +G   L   +FT + AN   ++++ + ++  + VK V  G  F +GK   G+  
Sbjct: 81  IKLMETLGVDYLFIVRFTSDFANLHPQEYVDQYIIN-MNVKHVSAGFDFTYGKLGKGNME 139

Query: 139 ILQ--KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            LQ   RGE   F    + +L ++  +I SS+ IR AL+ G     ++LLG  +T    V
Sbjct: 140 TLQFHSRGE---FTYTTVHKLTDHDEKI-SSTAIRKALSDGETAKVSNLLGRYYTTSGTV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHG+K GR +GFPTAN++LS D I  K GVYA+R   Q+Q  ++GVAN G  PT   N P
Sbjct: 196 IHGDKRGRKIGFPTANIELSDDYITPKIGVYAVRLYVQNQW-HNGVANLGYKPTF--NNP 252

Query: 256 ----LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
               L +E  IFD+S  IYG+  TV + +Y+R E KF  IE+L   + +D+++A
Sbjct: 253 EDKALSIEVHIFDYSSSIYGEEVTVEWHNYIRSEKKFDGIEQLIAQIEKDKQQA 306


>gi|313496977|gb|ADR58343.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida BIRD-1]
          Length = 316

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 154/303 (50%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVIFEP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L 
Sbjct: 57  QPREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNHRLSKLSADAFVKAILVDGLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G  YGF     +TV  D LR      VSS+ +R 
Sbjct: 117 VRHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTVIQDGLR------VSSTEVRK 170

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G    A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 171 ALSEGDFELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASI-V 229

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E
Sbjct: 230 IDGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLE 289

Query: 293 KLK 295
            LK
Sbjct: 290 ALK 292


>gi|67920640|ref|ZP_00514160.1| Riboflavin kinase / FAD synthetase [Crocosphaera watsonii WH 8501]
 gi|67858124|gb|EAM53363.1| Riboflavin kinase / FAD synthetase [Crocosphaera watsonii WH 8501]
          Length = 309

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 161/293 (54%), Gaps = 8/293 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +A+GNFDGIHLGH  +++  I++      T+++F PHP+      +    L+P + + K 
Sbjct: 16  IALGNFDGIHLGHRQVIKPIIELEAEYIPTLVTFTPHPQEFFTGKTRQL-LTPLTEKVKR 74

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +    L+R  F    A+   + F++ +LV+ L VK +  G  FRFGK R G+  +LQ
Sbjct: 75  LESLKIRQLVRLPFDSSLASLGPQAFVEDILVKQLNVKYISVGQDFRFGKGREGNAQMLQ 134

Query: 142 KRGEKYGFHTVFIDELR---NNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           +     G   V+I +L+   + +S + +SSS IR  L  G+V  A  +L Y +++E  V+
Sbjct: 135 ELANNLGIF-VYITKLKTLVSGESGLRISSSRIRQCLAVGNVRQAKEMLSYPYSLEGMVV 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GRT+GFPTAN+Q+  D LL + GVY +R     +    GV N G  PT+    P 
Sbjct: 194 RGQQVGRTIGFPTANLQIPADKLLPRRGVYCVRVILATEEVIKGVINIGSRPTVNGQVP- 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  + D+S  +Y     V    +LR E KF  ++ LK  + +D   AR+ L
Sbjct: 253 TVEVHLLDWSGNLYATFLRVQLEKFLRSEQKFPSLDALKNQITQDCMIARQTL 305


>gi|296532264|ref|ZP_06895005.1| riboflavin biosynthesis protein RibF [Roseomonas cervicalis ATCC
           49957]
 gi|296267400|gb|EFH13284.1| riboflavin biosynthesis protein RibF [Roseomonas cervicalis ATCC
           49957]
          Length = 321

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/284 (36%), Positives = 142/284 (50%), Gaps = 2/284 (0%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+HLGH  +L  A        +  L+F PHPR   +   P F L+  S +   L   
Sbjct: 35  NFDGVHLGHRAVLRAAHAGRPELKLAALTFEPHPREHFRPDDPPFRLTLASAKAAALGAA 94

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   +I   F    A   AE+F+ +VL   L  K +  G  F FG  R GD G L  R E
Sbjct: 95  GADIVIALPFDATLAAMPAEEFVTEVLHRGLGAKHLACGADFAFGHRRGGDVGFLAARAE 154

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
             G     +  + +    I SSS IR AL  G+   AA  LG  + I   V HG+K GRT
Sbjct: 155 ALGIGLTVVPPVADEAGPI-SSSRIRRALQDGYPERAAAALGRPWAITGVVSHGDKRGRT 213

Query: 206 LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF 265
           +GFPTAN+ L   +    GVYA+  R     +  GVAN G  PT V      +E+ +FD+
Sbjct: 214 IGFPTANVPLGRHLEPARGVYAVAVRLAGGATVPGVANIGLRPT-VGGSESRVEAHLFDY 272

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + ++YGQ  +V+   +LRPE KF  + +L   +G D   AR++L
Sbjct: 273 AGDLYGQEVSVALRHFLRPERKFAGLPELVAQIGADAAAARRLL 316


>gi|53803701|ref|YP_114670.1| riboflavin biosynthesis protein RibF [Methylococcus capsulatus str.
           Bath]
 gi|53757462|gb|AAU91753.1| riboflavin biosynthesis protein RibF [Methylococcus capsulatus str.
           Bath]
          Length = 309

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 167/313 (53%), Gaps = 27/313 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V H +      P      V +IGNFDG+HLGH  ++ +  +  +    P+ ++ F P 
Sbjct: 1   MRVIHGLSGTICPP----ACVASIGNFDGVHLGHQTLVRRLTEQGHRLGLPVALVLFEPQ 56

Query: 59  PRTIIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR            SPP +    EK+  L ++    ++  +F  + A  +   F++++L 
Sbjct: 57  PREFFDQDQ-----SPPRLMRLSEKLTRLAELPVDWVLLLRFDEKLATLAPADFVRRILA 111

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSS 168
           E L V+ +I G  FRFG+ R+GD  +L + G  +GF      +V +  +R      VSS+
Sbjct: 112 ERLHVRHLIVGDDFRFGRGRSGDYELLCRLGRLHGFAVSDTESVTVGGIR------VSST 165

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            +R AL +G +  AA LLG  + +   V+HG+++GR LGFPTAN++L  + +  +GV+A+
Sbjct: 166 RVREALGRGDMAGAATLLGRPYALRGRVVHGDQLGRRLGFPTANIELGRENIPVQGVFAV 225

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                    + GVAN G  PT+  +   +LE+ +FDF+ ++YG+R  +     LR E++F
Sbjct: 226 TMSGISAEPWPGVANIGIRPTVGGHRKAMLETHLFDFAGDLYGRRVEIHLHYKLRDEMRF 285

Query: 289 KDIEKLKIYMGED 301
            ++E+LK  +  D
Sbjct: 286 ANLEELKEQIACD 298


>gi|269962528|ref|ZP_06176876.1| Riboflavin biosynthesis protein [Vibrio harveyi 1DA3]
 gi|269832723|gb|EEZ86834.1| Riboflavin biosynthesis protein [Vibrio harveyi 1DA3]
          Length = 323

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/296 (36%), Positives = 156/296 (52%), Gaps = 16/296 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +         L+   
Sbjct: 28  GCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQPMELFARDKAPARLTRLR 87

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+    L+   F    A+ +AE+FI+ +LV  L VK ++ G  F FGK R G+
Sbjct: 88  DKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGVKFLVIGDDFCFGKGRTGN 147

Query: 137 RGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ+ GEKYGF  V      + +LR      VSS+ IR AL +  + +A  +LG  ++
Sbjct: 148 FAMLQEAGEKYGFEVVSTQSFCLQQLR------VSSTAIRKALARDDLHSAQEMLGRDYS 201

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+ 
Sbjct: 202 ISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPIGGVANIGQRPTV- 260

Query: 252 PNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            NG    LE  +FDF  ++YG++  V     LR E KF+  E LK  +  D + AR
Sbjct: 261 -NGVRQQLEVHLFDFHADLYGKQLEVKLLHKLRDEQKFESFEALKQQIVLDAEAAR 315


>gi|325272198|ref|ZP_08138621.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           sp. TJI-51]
 gi|324102664|gb|EGC00088.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           sp. TJI-51]
          Length = 316

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 154/303 (50%), Gaps = 28/303 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE------QAIKIANNSPITVLSFNP 57
            HN+      P H +G V  IGNFDG+H GH  IL       QA+ +    P  V+ F P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERGQALGL----PTCVVVFEP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      +    L+    + ++L   G   ++   F    +   A+ F++ +LV+ L 
Sbjct: 57  QPREYFAPDTAPARLARLRDKLELLAAEGIDRVLCLAFNQRLSKLGADAFVKTILVDGLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRT 172
           V+ +  G  FRFG DRAGD   L + G++YGF     +TV  D LR      VSS+ +R 
Sbjct: 117 VRHLEVGDDFRFGCDRAGDFAFLVEAGKQYGFTVEAANTVIQDGLR------VSSTEVRQ 170

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL  G+   A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY      
Sbjct: 171 ALADGNFELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI 230

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D  ++ GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E
Sbjct: 231 -DGKAWPGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLE 289

Query: 293 KLK 295
            LK
Sbjct: 290 ALK 292


>gi|293606193|ref|ZP_06688556.1| riboflavin biosynthesis protein RibF [Achromobacter piechaudii ATCC
           43553]
 gi|292815340|gb|EFF74458.1| riboflavin biosynthesis protein RibF [Achromobacter piechaudii ATCC
           43553]
          Length = 285

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 145/261 (55%), Gaps = 5/261 (1%)

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAE 105
           +V++F PHPR    + +    L+P  +   ++K+  L + G S ++  +F    A  SA 
Sbjct: 17  SVMTFEPHPREYFATLNHRPELAPTRVSGLRDKLSALARYGVSQVVVQRFNARLAEMSAN 76

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV 165
            FI+ +LV+ L+ K ++ G  FRFG  R+GD  +L++ G  +GF    + ++ + +   +
Sbjct: 77  AFIETLLVQGLQTKWLLVGEDFRFGHKRSGDIDLLREAGMHHGFEVQTLADVTDQQGHRI 136

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGV 225
           SSS +RTAL  G +  A HLLG+ + I   VIHG+K+GRTLG+PT N++++     + G+
Sbjct: 137 SSSEVRTALAVGDLDRARHLLGHPYHISGHVIHGQKLGRTLGYPTMNLRVAERCAARSGI 196

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           Y ++           VA+ G  PT+   G +LLES + D + + YG+   V F   LR E
Sbjct: 197 YVVQVHGLADRPLPAVASLGVRPTVEDRGRVLLESHLLDDTVDAYGKLVRVEFLHKLRDE 256

Query: 286 IKFKDIEKLKIYMGEDEKKAR 306
            KF D+  L   + ED + AR
Sbjct: 257 EKFPDLPSLTAAIAEDARNAR 277


>gi|27262322|gb|AAN87442.1| Riboflavin kinase [Heliobacillus mobilis]
          Length = 335

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 5/289 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDG+HLGH  ++ + +K A        V +F+PHP  + +  S    ++PP ++ 
Sbjct: 30  VALGNFDGVHLGHQKLISEMVKKARARQGTAVVATFHPHPLQVTRPQSAPKIITPPDVKA 89

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ++ ++G   ++   F  E A+ S E+F QK+L+E L  ++V  G  + FG+   G   +
Sbjct: 90  ALMGRLGVDIVLMLPFDAELASLSPEEFTQKILIEDLRAQSVTVGFNYSFGRGGKGTPQL 149

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G++ GF    ID +     + VSS+ IR++L  G +  AA  LGYR  ++  V+ G
Sbjct: 150 LWELGQQKGFRVKVIDAV-TVSGEPVSSTLIRSSLEAGRIERAAEFLGYRPILQGIVVPG 208

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNGPLL 257
           ++ GR++GFPTAN+Q++ +  L   GVYA   R  Q +     V N G  PT        
Sbjct: 209 DQRGRSIGFPTANLQVAAEQFLPARGVYAAWARVGQKEAESMAVLNIGVKPTFGSGLAET 268

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E+ + DF  ++YGQ  ++S   +LRPE++F+  E+L   +  D +  R
Sbjct: 269 IEAHLIDFEGDLYGQPLSLSLLSHLRPEMRFQSAEQLVEQIHRDVQAVR 317


>gi|17547176|ref|NP_520578.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           solanacearum GMI1000]
 gi|17429478|emb|CAD16164.1| probable riboflavin biosynthesis protein [Ralstonia solanacearum
           GMI1000]
          Length = 332

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 155/296 (52%), Gaps = 3/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+H GH  +L +A   A+    P+TV++F PHPR           ++    +
Sbjct: 17  ALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREFFMPDRAPTRIALLRDK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++   F    A  + + F++ VLV+ L  + ++ G  FRFG  RAGD  
Sbjct: 77  LESLRRQGVDRVVVEHFNAHFAAQTPQAFVRNVLVDGLHARWLLVGDDFRFGAKRAGDFT 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A  LLG+ + I   V+H
Sbjct: 137 YLQAAGAQFGFEVEQMGSVSESGIRI-SSSAVREALAAGDLEHARRLLGHGYAISGHVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K+GR+LGFPT N+++S       G++ ++     +     VA+ G  PT+  +G +LL
Sbjct: 196 GQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLTEKPLPAVASIGVRPTVDDSGRVLL 255

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E+ +FDF   +YG+   V F   LR E +F  ++ LK  +  D   AR     + P
Sbjct: 256 EAHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAIARDCVDARHFFGLAIP 311


>gi|309781489|ref|ZP_07676225.1| riboflavin biosynthesis protein RibF [Ralstonia sp. 5_7_47FAA]
 gi|308919902|gb|EFP65563.1| riboflavin biosynthesis protein RibF [Ralstonia sp. 5_7_47FAA]
          Length = 332

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  + ++F++ VLV+ L  + ++
Sbjct: 61  FTPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPDEFVRNVLVDGLHARWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFTYLQAAGAQFGFEVEQMGSVSESGIRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVAGIFVVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  + +D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHIFDYHASVYGKLVRVEFMKKLRDEARYDSLDALKDAIAQDC 299

Query: 303 KKARKILESSYP 314
             AR+      P
Sbjct: 300 VHARQFFGLPVP 311


>gi|260220491|emb|CBA28081.1| Riboflavin biosynthesis protein ribF [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 344

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 158/328 (48%), Gaps = 25/328 (7%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT 71
           P   +   V IGNFDG+H GH  +L      A     P  VL+F PHPR           
Sbjct: 22  PGVAEACAVTIGNFDGVHRGHQAMLALLKSEAQQRGVPSCVLTFEPHPRDYFAKLHQKPE 81

Query: 72  LSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P    ++++K+  L K G    I   F    AN S + FIQ+VL + L  + V+ G  
Sbjct: 82  LAPARVGTLRDKLDDLAKAGVDQTIVLPFDARLANQSPQDFIQQVLQDGLGARYVLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNA 182
           FRFGK RAGD  +L   GE  GF     D  R N  ++    VSSS +R AL +G + +A
Sbjct: 142 FRFGKARAGDYALLDAAGEALGF-----DVARMNSYEVHGLRVSSSAVREALGQGRMQDA 196

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A LLG  + I   V+HG K+GRTLGF T N++ +       G++ +           GVA
Sbjct: 197 ARLLGRPYCISGHVVHGRKLGRTLGFKTLNLRFAHWKPAASGIFVVLVHGLAAKPLQGVA 256

Query: 243 NFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDIEK 293
           N G  P++ PN    G +LLE+   D+ +E+     YG+   V     L  E+K+  ++ 
Sbjct: 257 NLGVRPSLDPNDVNRGRVLLETHCLDWPEELGTEGAYGKIIRVELLHKLHDELKYDGLDA 316

Query: 294 LKIYMGEDEKKARKILESSYPLSERDRI 321
           L   + +D   AR  L +   L    RI
Sbjct: 317 LTQGIQKDRDDARAWLAAHISLPGGTRI 344


>gi|28868033|ref|NP_790652.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851269|gb|AAO54347.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|331018367|gb|EGH98423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 308

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P   + F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCAVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F    +  SA  F++ VL++ L V+
Sbjct: 59  REFFAPQTAPARLARLRDKLELLGAEGVDRVLCLSFNQRLSKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID LR      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGLR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AAADFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              + GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E L
Sbjct: 232 GKPWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|296274830|ref|ZP_06857337.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MR1]
          Length = 323

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T+ +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTIIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|170025804|ref|YP_001722309.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|169752338|gb|ACA69856.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           YPIII]
          Length = 312

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD
Sbjct: 76  DKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V
Sbjct: 136 FQLLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDDLVLAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRTLGFPTAN+ L   +   +GVYA+       T   GVAN G  PT V     
Sbjct: 195 VHGDELGRTLGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPLYGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG    V     LR E +F  +E LK  +  D   AR       P+
Sbjct: 254 QLEVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQIANDVVTARTFFGLKTPV 312


>gi|148267762|ref|YP_001246705.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393821|ref|YP_001316496.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH1]
 gi|257795672|ref|ZP_05644651.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9781]
 gi|258416075|ref|ZP_05682343.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9763]
 gi|258421658|ref|ZP_05684582.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9719]
 gi|258447557|ref|ZP_05695701.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6300]
 gi|258449399|ref|ZP_05697502.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6224]
 gi|258454778|ref|ZP_05702742.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A5937]
 gi|282927614|ref|ZP_06335230.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A10102]
 gi|295406209|ref|ZP_06816016.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8819]
 gi|297244437|ref|ZP_06928320.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8796]
 gi|147740831|gb|ABQ49129.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946273|gb|ABR52209.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH1]
 gi|257789644|gb|EEV27984.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9781]
 gi|257839223|gb|EEV63699.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9763]
 gi|257842344|gb|EEV66769.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9719]
 gi|257853748|gb|EEV76707.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6300]
 gi|257857387|gb|EEV80285.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6224]
 gi|257863161|gb|EEV85925.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A5937]
 gi|282590617|gb|EFB95694.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A10102]
 gi|285816954|gb|ADC37441.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus aureus
           04-02981]
 gi|294968797|gb|EFG44819.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8819]
 gi|297178467|gb|EFH37713.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8796]
 gi|315131066|gb|EFT87050.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727059|gb|EGG63515.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 323

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKTEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|239905257|ref|YP_002951996.1| riboflavin kinase/FMN adenylyltransferase [Desulfovibrio magneticus
           RS-1]
 gi|239795121|dbj|BAH74110.1| riboflavin kinase/FMN adenylyltransferase [Desulfovibrio magneticus
           RS-1]
          Length = 312

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 165/302 (54%), Gaps = 15/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L G  + IGNFDG+H+GH  +L++  +  +A       L+F+PHPR ++  ++     +P
Sbjct: 14  LHGVCLTIGNFDGVHMGHAKLLQRTRERAVAAGLVSVALTFDPHPRRVLMGNA-----AP 68

Query: 75  PSIQ--EKILEKMGFSAL---IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           P+I   E  LE +G S +   +   FT E A    E F+ +VLV  L +K ++ G  + F
Sbjct: 69  PAITLLEHKLECIGQSGVQVCVVLPFTRELAAREPEDFVGQVLVGGLCLKHLVIGYDYAF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK R G+  +L   G+KYGF    +D +  N + +VSS+ IR  +  G+V +A  LLG  
Sbjct: 129 GKGRRGNFEMLSTMGQKYGFGVERLDPVIINGA-VVSSTRIRDMVQAGNVWDARPLLGRF 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
             +   V+HG+K GR LGFPTAN+ +  +++   GVYA+     D     GVAN G+NPT
Sbjct: 188 HQVRGLVVHGQKRGRKLGFPTANVGVRDELVPLSGVYAVWVEV-DGILRPGVANIGKNPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +  L +E+ I DF  +IY Q   V F   +R E KF   E+L   + ED   AR IL
Sbjct: 247 F-GDFDLSVEAHILDFKGKIYDQPIRVHFVQRIRSEKKFSGPEELITRIREDIGLARMIL 305

Query: 310 ES 311
            +
Sbjct: 306 AA 307


>gi|262195658|ref|YP_003266867.1| riboflavin biosynthesis protein RibF [Haliangium ochraceum DSM
           14365]
 gi|262079005|gb|ACY14974.1| riboflavin biosynthesis protein RibF [Haliangium ochraceum DSM
           14365]
          Length = 325

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 166/325 (51%), Gaps = 15/325 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +F   E +++L   L   VVA+GNFDG+HLGH  +L +A+++A   +S     +F+PH
Sbjct: 1   MEIF---EGHRALFRPLVAPVVALGNFDGVHLGHQRLLSRAVELARAGDSDAVAFTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  S     L+  + + ++  + G SA +   FT E A  + E F+Q +LV+    
Sbjct: 58  PAAVLAPSKAPPLLTTRARKLELFAEAGLSACVVEPFTAELAALAPEAFLQSILVDIFGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G+ RAG    L+  G   G     I  +     + +SS+ +R  +  G 
Sbjct: 118 RHIVVGYDFTYGRARAGTTETLRAFGAARGIGVDVIAPVEAG-GEAISSTRVRALVEAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF-------- 230
           V +A  LLG  F +E  V+ GE  GRT+G PTAN+++   +L   GVYA+R         
Sbjct: 177 VSDAGALLGRSFDVEGAVVRGEGRGRTIGIPTANIEVGGALLPPGGVYAVRADLLGAPLA 236

Query: 231 -RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
                +  ++GVAN G  PT    G   LE  + D S ++YG+   + F + LR E +F 
Sbjct: 237 DDAPRRAGWAGVANLGTKPTFGDGGEQTLEVHLLDRSDDLYGKTLRLHFVERLRAEQRFD 296

Query: 290 DIEKLKIYMGEDEKKARKILESSYP 314
            ++ L   +  D  +AR++L    P
Sbjct: 297 GVDALVRQIHTDIARARELLGCPAP 321


>gi|254490428|ref|ZP_05103614.1| riboflavin biosynthesis protein RibF [Methylophaga thiooxidans
           DMS010]
 gi|224464172|gb|EEF80435.1| riboflavin biosynthesis protein RibF [Methylophaga thiooxydans
           DMS010]
          Length = 293

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 14/293 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IGNFDG+HLGH  +L Q     +    P  V++F P P            L+    +
Sbjct: 1   MATIGNFDGVHLGHQAVLSQLAMKGDMLRLPAVVITFEPQPFEYFVPEKAPARLTRFREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L       L   +F    A  +AE+FIQK+LVE L V+ ++ G  FRFG+ R GD  
Sbjct: 61  VEALRAFSIQQLCVLRFNQALARMTAEEFIQKLLVEGLNVRYLVVGDDFRFGRHRHGDFA 120

Query: 139 ILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +LQ+ G++YGF     HT  I+  R      VSS+ IR AL  G +  A  LLG  + + 
Sbjct: 121 MLQQAGKQYGFQVVNMHTFAIEHDR------VSSTRIRDALRDGDLEMAEKLLGRPYRMS 174

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG+K GR +GFPTAN+ L    +   GV+A++    ++   +GVAN G  PT+  N
Sbjct: 175 GRVAHGDKRGRKMGFPTANIHLHRCKIPLTGVFAVQLFGLEEEPVNGVANIGIRPTIGGN 234

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              LLE  +FDF ++IYG+   V F   +R E +F  ++ L   +  D ++A+
Sbjct: 235 -KALLEVHLFDFKRDIYGEHVQVHFLHKIRDEQRFDGLDALIAQIEIDCEQAK 286


>gi|163786664|ref|ZP_02181112.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteriales bacterium ALC-1]
 gi|159878524|gb|EDP72580.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteriales bacterium ALC-1]
          Length = 298

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 158/295 (53%), Gaps = 7/295 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTL 72
           N     V  IG FDGIH+GH  IL++ + +A    +   VL+  PHPR ++Q    I  L
Sbjct: 2   NTKSAKVTTIGTFDGIHIGHQKILKRVVTLAKKQDLEPVVLTLFPHPRMVLQKDDSIKLL 61

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +  + +  +L+  G   +I  +FT E AN SA+ +++++LV+ L  K ++ G    FGK+
Sbjct: 62  NTINERVVLLKSFGIKDVIVKEFTKEFANLSAKDYVKQILVDELNTKQIVIGYDHHFGKN 121

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  +   L++  + Y F    I   ++ +   VSS+ IR AL KG V  A   LGY + I
Sbjct: 122 RNANITDLKEFAQLYNFRVEEISA-QDIEDVTVSSTKIRNALDKGQVALANSFLGYTYFI 180

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V+ G+ IGRT+ FPTAN+ +     L   EGVY ++ +  D   + G+ N G NPT 
Sbjct: 181 TGTVVKGKGIGRTIDFPTANIHIKETYKLIPNEGVYVVKSKIDDNIIF-GMMNIGTNPT- 238

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           V      +E   F+F+ +IY     + F   LR E KF++IE LK  + +D+K A
Sbjct: 239 VGGETRSIEVHFFNFNTDIYESELKIEFLKRLRSEQKFENIEALKNQLAKDKKAA 293


>gi|256830735|ref|YP_003159463.1| riboflavin biosynthesis protein RibF [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579911|gb|ACU91047.1| riboflavin biosynthesis protein RibF [Desulfomicrobium baculatum
           DSM 4028]
          Length = 314

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 10/297 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII--QSSSPIFTLS 73
           KG  V IGNFDG+H+GH  ++ +   +A     P  V++F PHP      + + P  TL 
Sbjct: 15  KGSCVTIGNFDGVHIGHQRLIARVRDLAAGFGLPSVVITFEPHPLRFFTGKKTPPFITLY 74

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + +++  +G   L+  +F    A+ S E F++++LVE L +K ++ G  + FGK R
Sbjct: 75  EQ--RAELIRSLGIDHLLCLEFNQALASMSPEDFVRRILVEGLHIKELVIGYDYAFGKGR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +L + G+++ F    ++ +  +++ IVSS+ IR  +  G V  A  LLG  + + 
Sbjct: 133 RGNYALLSQLGKQWAFGVEQLEPVMVDQA-IVSSTRIRDLVEAGDVWAAKPLLGRFYRVT 191

Query: 194 SDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+ + GR LGFPTAN+ L  ++  K GVY   +   D   +  VAN G NPT   
Sbjct: 192 GTVVHGQNRGGRLLGFPTANVHLVDELFPKTGVYCC-WAELDGEIHQAVANIGYNPTF-G 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N  L +E  + DFS ++Y +   V F   LR E KF  +++LK  +G+D   AR IL
Sbjct: 250 NDVLSVEVHVMDFSADLYERTLKVHFVQRLRGERKFSGLDELKAQIGKDVALARTIL 306


>gi|50954473|ref|YP_061761.1| riboflavin kinase/ FMN adenyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
 gi|50950955|gb|AAT88656.1| riboflavin kinase/ FMN adenyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
          Length = 314

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 25/321 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF  +     +P       V IG FDG+H GH  ++ +  ++A+   +  TV++F+ +
Sbjct: 1   MKVFTAV---ADVPAGYGPSAVTIGKFDGVHTGHRAVIARLRQVADERGLAATVITFDRN 57

Query: 59  PRTIIQSSSPIFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           P  +I          PP++     +  +L   G  A +   F    A  S ++F++++LV
Sbjct: 58  PLEVIAPEK-----CPPALVSNRQKLDLLAGTGIDATLMVPFDRALAELSPDEFVRRILV 112

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L    V+ G+ FR+G+  AGD   L++RGE+YGF    ID++R  + + VSS+ IR  
Sbjct: 113 DRLRAAVVLVGSDFRYGRGGAGDVAFLRERGEQYGFAVELIDDVRPERGRRVSSTWIREL 172

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRF 230
           L +G V +AA LLG   T+   V+HG   GR LGFPTAN  LSP+   ++  +GVYA  F
Sbjct: 173 LAEGDVAHAALLLGQVPTVRGVVVHGAVRGRELGFPTAN--LSPELEGLIPADGVYA-GF 229

Query: 231 RTQDQTSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
            T D   +    + G NPT   VP+    +E++  D   ++YG    ++F + +R  + +
Sbjct: 230 LTDDGQRWPSAISVGNNPTFEGVPHKQ--VEAYALDRELDLYGHTVELAFHERIRGMVAY 287

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E L   + +D ++AR+IL
Sbjct: 288 AGVEPLIAQIRDDVERARRIL 308


>gi|121998616|ref|YP_001003403.1| riboflavin biosynthesis protein RibF [Halorhodospira halophila SL1]
 gi|121590021|gb|ABM62601.1| riboflavin biosynthesis protein RibF [Halorhodospira halophila SL1]
          Length = 311

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 8/300 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  + IGNFDG+H GH  ++++  + A     P  V++F PHP   +  +     L+  
Sbjct: 15  RGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPMERLAPARAPARLT-- 72

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            ++EK+  L + G  A++  +F    A   AE F  ++L   L    V+ G  FRFG+ R
Sbjct: 73  GLREKVRRLGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFVLVGDDFRFGRQR 132

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +L++ GE +G+    ++ +     + VSS+ IR A+  G    AA LLG+ + I+
Sbjct: 133 RGDLEMLRRAGEAWGYEVAPMETV-TRSGERVSSTRIREAVRAGRFAEAAELLGHPYCIQ 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+ +GR LG+PTAN++LSP+ +  +G+YA   R   +  +    + G  PT V  
Sbjct: 192 GRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAISVGIRPT-VGG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
              + E+ + DF  ++YG+   V     LR E  F  ++ L   +GED + AR++L   +
Sbjct: 251 RRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVRAARRVLGQEH 310


>gi|260775153|ref|ZP_05884051.1| riboflavin kinase/FMN adenylyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608854|gb|EEX35016.1| riboflavin kinase/FMN adenylyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 311

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/312 (36%), Positives = 160/312 (51%), Gaps = 26/312 (8%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPR 60
           HNI+ + S      G V+ IGNFDG+HLGH  +L    EQA K+    P TV++F P P 
Sbjct: 8   HNIKAHHS------GCVLTIGNFDGVHLGHQAVLRQVSEQAAKLG--LPATVMTFEPQPL 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +         L+    +   L K+    L+   F    AN + ++FI  +LV+ L VK 
Sbjct: 60  ELFAKEKAPARLTRLRDKFVQLSKLNIQRLLCVNFNKRFANQTPDEFISDLLVKRLGVKF 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALT 175
           ++ G  F FGK R G+  +L++ GEK+GF  V      +++LR      VSS+ IR AL 
Sbjct: 120 LVVGDDFCFGKGRKGNFKMLKEAGEKHGFEVVSTQSFCLEQLR------VSSTAIREALA 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
              + +AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +       
Sbjct: 174 SDELNSAAEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALGLGG 233

Query: 236 TSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               GVAN G  PT+  NG    LE  +FDF   +YG++  +     LR E KF   E L
Sbjct: 234 KPIGGVANIGNRPTV--NGVRQQLEVHLFDFQANLYGKQLEIVLLHKLRDEHKFDSFEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D + AR
Sbjct: 292 KQQIELDAEAAR 303


>gi|197283929|ref|YP_002149801.1| bifunctional riboflavin kinase/FMN adenyltransferase [Proteus
           mirabilis HI4320]
 gi|227358202|ref|ZP_03842543.1| FAD synthetase [Proteus mirabilis ATCC 29906]
 gi|194681416|emb|CAR40254.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Proteus mirabilis HI4320]
 gi|227161538|gb|EEI46575.1| FAD synthetase [Proteus mirabilis ATCC 29906]
          Length = 313

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 156/294 (53%), Gaps = 5/294 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   + A+    P  V++F P P            L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLKHLKQEASRRGLPTVVMTFEPQPLEFFLPEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  KF  + A  + E+F+  +LV+ L VK +  G  FRFGK+RAGD
Sbjct: 76  DKIKYLAECGIDYLLCVKFDKQFAAQTPEEFVSSLLVDKLGVKFLAIGDDFRFGKNRAGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              LQ+ G +YGF  V   E   +K   +SS+ +R AL    +  A  LLG+ +++   V
Sbjct: 136 FHFLQQAGARYGFE-VANTESYCDKGLRISSTAVREALFNDDLALAESLLGHPYSVCGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           +HG ++GRT+GFPTAN+ +   +    GVYA+     D Q+  +GVAN G  PT+   G 
Sbjct: 195 VHGNQLGRTIGFPTANIPMKRLVAPVAGVYAVDVYLADHQSPLAGVANIGSRPTVKGKG- 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + LE  + D + ++YG+R  V     LR E +F  ++ LK  +  D   AR  L
Sbjct: 254 VQLEVHLIDVNMDLYGRRIDVVLRKKLRNEQRFASLDALKQQIANDVAAARDFL 307


>gi|163791143|ref|ZP_02185562.1| riboflavin biosynthesis protein RibF [Carnobacterium sp. AT7]
 gi|159873615|gb|EDP67700.1| riboflavin biosynthesis protein RibF [Carnobacterium sp. AT7]
          Length = 323

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 157/287 (54%), Gaps = 9/287 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI--FTLSPPS 76
           V+A+G FDG+H GH  ++ +A  IA  NN  + V++FN HP  + +   P     LS  S
Sbjct: 21  VLALGFFDGVHRGHQEVIGRAKNIADKNNLKLAVMTFNQHPSIVFKKLDPDQHKYLSTVS 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E++++K+G   L    FT   A+ S + F+++ ++  L  KTV+ G  + FGK     
Sbjct: 81  RKEELMDKIGVDYLYEVDFTSAFASLSPQDFVEQYIIN-LHAKTVVAGFDYTFGKKEVAS 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L        F  V + E +  K + +SS+ IR AL  G +  A  LLGY +     V
Sbjct: 140 MEHLPMYANNR-FDIVVV-EKQTLKEKKISSTRIRLALEIGDMAVANKLLGYTYATPGRV 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GR LGFPTAN+++   + L + GVYA+      Q  Y G+A+ G N T  PN P
Sbjct: 198 VHGDARGRLLGFPTANIEVENFVKLPRIGVYAVEILVGGQV-YKGMASIGHNVTFEPNRP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           L +E +I DFS +IYG+  TV + DYLR E KF  I+ L   + +DE
Sbjct: 257 LTVEVYILDFSDDIYGEEVTVFWHDYLRGEEKFDSIDALIAQLKQDE 303


>gi|311898684|dbj|BAJ31092.1| putative riboflavin kinase/FMN adenylyltransferase [Kitasatospora
           setae KM-6054]
          Length = 314

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H +E    +P      VV IG+FDG+H GH LI+ + +++A    +   V++F+PH
Sbjct: 1   MQRWHGLE---EIPGDWGRSVVTIGSFDGVHRGHQLIINRVVELAGELGARSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++E++G  A++   FT E +  S E F++ VLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPQPRRAELVEQLGVDAVLVLPFTAEFSKESPEYFVRSVLVDALHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID-ELRN--NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AGD G+L + G    F    +D ++R      +  SSS  R  + 
Sbjct: 118 KAVVEGPNFRFGHRAAGDVGLLAELGRADDFTVEVVDLQVRGAAGDGEPFSSSLCRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
            G +   A +LG    +E +V+ G + GR LG+PTAN+  ++   +  +GVYA  + T D
Sbjct: 178 AGDLAGVAEILGRPHRVEGEVVRGAQRGRELGYPTANVDTVAHSAIPADGVYA-GWLTAD 236

Query: 235 QTSYSGVANFGRNPTMVPNGP-LLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             +     + G NPT   +G    +E++  D    ++YGQ   V F  +LR   KF  IE
Sbjct: 237 GETMPAAISVGTNPTF--DGTHRTVEAYAIDRVGLDLYGQHVAVDFLAWLRGMEKFDSIE 294

Query: 293 KLKIYMGEDEKKARKILE 310
            L   M ED K+AR + E
Sbjct: 295 ALLERMAEDVKRARDLTE 312


>gi|323527125|ref|YP_004229278.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1001]
 gi|323384127|gb|ADX56218.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1001]
          Length = 331

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG  + I   V+HG K+GR LGFPT N+Q++       G++ +R        
Sbjct: 176 DLDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLQIAHKRPALAGIFVVRVHGVADEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|260438336|ref|ZP_05792152.1| riboflavin biosynthesis protein RibF [Butyrivibrio crossotus DSM
           2876]
 gi|292808923|gb|EFF68128.1| riboflavin biosynthesis protein RibF [Butyrivibrio crossotus DSM
           2876]
          Length = 299

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 151/278 (54%), Gaps = 9/278 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV  G FDGIH GH L++E+A++I +   I V+  +FN        ++ P   ++ P  +
Sbjct: 16  VVTFGKFDGIHNGHRLLIEKAVRIGHEQGIKVVLCTFNMDN----WNAKPQKAITTPDER 71

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I EK G   L  Y F  E A    E+F++  L E L  K V+ G  +RFGK+R+GD  
Sbjct: 72  AYICEKYGIDVLYEYPFDNEIAGMLPEEFLKYFLKEKLNAKFVVIGADWRFGKNRSGDAA 131

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   +KY + +  I++   N ++I SS+ IR  + K  +     LLGY +  +  V+H
Sbjct: 132 LLKAYEDKYCYSSYVIEKETYNNTEI-SSTWIRNEIEKSDLSTVKKLLGYDYFFKGKVVH 190

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GRT+GFPT N+  SP+ +L E GVY       D   Y GV N G  PT+     + 
Sbjct: 191 GKQLGRTIGFPTLNLIPSPNKILPEYGVYESEV-VIDNHMYKGVTNIGIRPTIDDGTYVT 249

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +E+F+ DF +++Y     +    ++RPE KF  +  LK
Sbjct: 250 VETFVLDFDEDVYDSDVIIRLKKFIRPEQKFDSVNGLK 287


>gi|49483435|ref|YP_040659.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|282903827|ref|ZP_06311715.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C160]
 gi|282905590|ref|ZP_06313445.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908565|ref|ZP_06316395.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|283958015|ref|ZP_06375466.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295427759|ref|ZP_06820391.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297591283|ref|ZP_06949921.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus MN8]
 gi|49241564|emb|CAG40250.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|282327627|gb|EFB57910.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330882|gb|EFB60396.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595445|gb|EFC00409.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C160]
 gi|283790164|gb|EFC28981.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295128117|gb|EFG57751.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297576169|gb|EFH94885.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus MN8]
 gi|315194160|gb|EFU24553.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 323

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  ++  E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVNKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|283852347|ref|ZP_06369618.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. FW1012B]
 gi|283572304|gb|EFC20293.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. FW1012B]
          Length = 312

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 162/302 (53%), Gaps = 15/302 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L G  + IGNFDG+H+GH  +L++      A +     L+F+PHPR ++  ++     +P
Sbjct: 14  LNGVCLTIGNFDGVHMGHVKLLQRVRDRAAAASLVSAALTFDPHPRRVLLGNA-----AP 68

Query: 75  PSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           P+I       + +E +G    +   FT E A    E F++++LVE L ++ ++ G  + F
Sbjct: 69  PAITSTEHKLECIEAVGIQVAVVLPFTRELAAREPEDFVREILVEGLSLRQLVIGYDYAF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK R G+  +L   G+KYGF    +D +  N + +VSS+ IR  +  G V +A  LLG  
Sbjct: 129 GKGRKGNFELLSALGQKYGFGVERLDPVIINGA-VVSSTRIRDMVQAGQVWDARPLLGRF 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
             +   V HG+K GR LGFPTAN+ L  +++   GVYA+    +      GVAN GRNPT
Sbjct: 188 HQVRGTVAHGQKRGRKLGFPTANLALRDELVPLSGVYAVWVEVEGSIR-PGVANIGRNPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 + +E+ I D+  +IYG+   V F   +R E KF   ++L   + ED   AR IL
Sbjct: 247 F-GEFEMAVEAHILDYKGKIYGEPIRVHFVQRIRSEKKFSGPDELITRIREDVGLARMIL 305

Query: 310 ES 311
            +
Sbjct: 306 AA 307


>gi|310765127|gb|ADP10077.1| Riboflavin biosynthesis protein [Erwinia sp. Ejp617]
          Length = 314

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L Q          P+ V+ F P P  +  +      L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLAQLCAEGRRRHLPVVVMLFEPQPLELFAADKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + LE+ G   ++   F    A YSA++FI  +LV  L V+ +  G  FRFG  R G
Sbjct: 75  REKLRYLEQAGVDTVLCVGFDRHFAAYSAQRFITDLLVNKLGVQLLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF+ +      +   +I SS+ +R AL    +  A  LLG  F+I   
Sbjct: 135 DFLLLQKAGVEYGFNVISTQTFCDGGKRI-SSTAVRQALAADDLPLAQSLLGRPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRT+GFPTAN+ L   +   +GVYA+      + +  GVAN G  PT V    
Sbjct: 194 VVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGERALPGVANIGTRPT-VAGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V   D +R E +F  ++ LK  +  D   AR+
Sbjct: 253 QQLEVHLLDVTIDLYGRHIDVVLLDKIRDEQRFTSLDALKEQIANDVVTARR 304


>gi|121730023|ref|ZP_01682435.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae V52]
 gi|153215107|ref|ZP_01949814.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 1587]
 gi|153826783|ref|ZP_01979450.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-2]
 gi|153829356|ref|ZP_01982023.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 623-39]
 gi|254291959|ref|ZP_04962739.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           AM-19226]
 gi|121628227|gb|EAX60746.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae V52]
 gi|124114898|gb|EAY33718.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 1587]
 gi|148875139|gb|EDL73274.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 623-39]
 gi|149739434|gb|EDM53674.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-2]
 gi|150422098|gb|EDN14065.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           AM-19226]
 gi|327483481|gb|AEA77888.1| Riboflavin kinase [Vibrio cholerae LMA3894-4]
          Length = 322

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 153/301 (50%), Gaps = 20/301 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 133 QGNFALLQQAGQALGFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 187 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 247 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|256544702|ref|ZP_05472074.1| riboflavin biosynthesis protein RibF [Anaerococcus vaginalis ATCC
           51170]
 gi|256399591|gb|EEU13196.1| riboflavin biosynthesis protein RibF [Anaerococcus vaginalis ATCC
           51170]
          Length = 313

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V++GNFDG+H GH  ++++ IKI+ +  +T  VL F  + + I+       T     I+
Sbjct: 21  AVSLGNFDGVHKGHQKLMKENIKISKSKNLTPSVLLFKENTKNILNGEREYLTSLEDKIE 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             IL+ +G       +F+ +  + S  +FI+++L + L  K VI G  +RFGK   GD  
Sbjct: 81  --ILKNLGIECFCLLEFSDKFKDLSPYEFIEEILYKKLNTKYVIVGDNYRFGKMAKGDIK 138

Query: 139 ILQKRGEKYGFHTVFID-ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L+K  E + + T  +D EL + K  I++S++IR  + +G +  A   LG+ F ++  VI
Sbjct: 139 TLKKYEEDFAYKTKVVDFELDDGK--IINSTDIRQMVREGKIEKANKDLGHPFKMQGKVI 196

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G + GR L FPTAN++ S   +  K GVY  R    D+  Y  + + G NPT   N  +
Sbjct: 197 KGAQRGRLLNFPTANLKPSFKYVTAKSGVYFTRVNI-DRDFYYALTDIGTNPTF-ENKKM 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +E++I DFS++IYG+  ++ F +YLRP+ KF   E+L   M +D+K  R ++E
Sbjct: 255 KIETYIMDFSKDIYGKNISIEFLEYLRPDYKFNSPEELIGQMEKDKKTGRNLIE 308


>gi|241667172|ref|ZP_04754750.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254875724|ref|ZP_05248434.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254841745|gb|EET20159.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 305

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 12/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI-IQSSSP--IFTLSPP 75
            VAIG+FDG+HLGH  I+++ I+ A  NN    ++ F P P+   ++  +P  I+     
Sbjct: 17  AVAIGSFDGVHLGHQAIIQKLIRTAKENNLVPYIMFFEPLPKEFFLKEIAPTRIYDFRNK 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I    L K+G   +I +KF    AN  A++FI++ LV  L  K +I G  F+FGK+RAG
Sbjct: 77  VIN---LNKLGVEHIICHKFNQRFANIEAKEFIEEFLVRKLNTKHIIVGDDFKFGKNRAG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +L++    + F    I  L N  +  +SSS IR A+ +  +  A  L+G    I S 
Sbjct: 134 NYSLLEQYSLTHDFTVDRISTL-NLDNHRISSSQIRQAIAEHDIQQANKLIGSSLKINSR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+K GR +GFPT N +L  + +LK GVY  +    DQ  + G++N G  PT +    
Sbjct: 193 VLHGQKNGRKIGFPTVNQKLLKNSVLK-GVYLSKIYIDDQV-FFGISNAGTRPT-IDGKN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LLE+ IF+F++ IYG+  T     ++RPE KF   ++LK  + ED + A+K
Sbjct: 250 SLLETHIFNFNEFIYGKHITTEIIGFIRPEKKFNSFDELKTQIYEDVEIAKK 301


>gi|146305987|ref|YP_001186452.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina ymp]
 gi|145574188|gb|ABP83720.1| FMN adenylyltransferase / riboflavin kinase [Pseudomonas mendocina
           ymp]
          Length = 316

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 159/308 (51%), Gaps = 9/308 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           +L    +G VV IGNFDG+H GH  IL    E+A ++A   P  V+ F P PR      +
Sbjct: 9   NLQPQARGCVVTIGNFDGVHRGHQAILARLRERAAELA--VPSCVVIFEPQPREFFGPDT 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+    +  +L   G   ++   F       SA +F+Q+VLV+ L VK +  G  F
Sbjct: 67  APARLTRLRDKLALLAAEGVDLVLCLAFNRRLRELSAAEFVQRVLVDGLGVKDLEIGDDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG DRAGD   L+  G++YGF +V            VSS+ +R AL  G    A  LLG
Sbjct: 127 RFGCDRAGDFEFLKAAGQRYGF-SVDASTTVEVLGGRVSSTRVRQALADGDFELAEALLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             F I   V+HG+K+GR L  PTAN+QL    +   GVY +     D     GVAN G  
Sbjct: 186 RPFRIAGRVLHGQKLGRQLDAPTANIQLKRRKVPLTGVYLVSCEI-DGVIQPGVANIGVR 244

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P++  +G   LE  + DF+ ++YG+R +V+F   LR E +F  +E LK  +  D   AR+
Sbjct: 245 PSVAGDGRAHLEVHLLDFAGDLYGRRLSVAFHHKLRDEQRFASLEALKAAIAADIAAARE 304

Query: 308 ILESSYPL 315
             + S+PL
Sbjct: 305 YWQ-SHPL 311


>gi|147675076|ref|YP_001216176.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           cholerae O395]
 gi|262169980|ref|ZP_06037670.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC27]
 gi|146316959|gb|ABQ21498.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O395]
 gi|227012506|gb|ACP08716.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O395]
 gi|262021714|gb|EEY40425.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC27]
          Length = 322

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 153/301 (50%), Gaps = 20/301 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 133 QGNFALLQQAGQALGFEVVSTRSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 187 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 247 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|298530228|ref|ZP_07017630.1| riboflavin biosynthesis protein RibF [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509602|gb|EFI33506.1| riboflavin biosynthesis protein RibF [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 313

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 174/313 (55%), Gaps = 21/313 (6%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-- 63
           +IN +L + ++G  + IGNFDG+H+GH  +++Q  K      ++  V++F+PHP  ++  
Sbjct: 5   DIN-ALTDKIEGSALTIGNFDGVHVGHQQLIQQVRKRGRRMGLSSIVVTFDPHPLRVLVG 63

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           + + P  TL+   ++  +++++G   ++   F  + A+   E F+   LV+ L ++ +I 
Sbjct: 64  KKTPPFITLNQHKLE--LMQELGVDYILCMTFNKDIASMEPEDFVYDFLVKKLRLRELIV 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGH 178
           G  + FGK+R G+  +LQ+ G+KYGF       V +D        IVSS+ IR  +  G 
Sbjct: 122 GYDYVFGKNRRGNFHLLQQLGQKYGFSVDQFMPVMVD------GAIVSSTRIRDLVESGR 175

Query: 179 VLNAAHLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V     LLG  +++E  V  G ++ G  LGFPTAN+ L  ++    GVYA+ +     + 
Sbjct: 176 VWEVHPLLGRFYSVEGRVTTGRQRGGSLLGFPTANILLQDELFPSTGVYAV-WAEISGSI 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++ VAN G NPT   N  L +E  IFDF Q++Y  +  V F   LR E KF  IE+LK  
Sbjct: 235 HAAVANIGYNPTF-GNDYLSVEVHIFDFHQDVYNHKVKVHFVQRLRSEKKFAGIEELKSQ 293

Query: 298 MGEDEKKARKILE 310
           +  D K AR+IL+
Sbjct: 294 ITLDCKLAREILK 306


>gi|77919745|ref|YP_357560.1| riboflavin biosynthesis protein RibF [Pelobacter carbinolicus DSM
           2380]
 gi|77545828|gb|ABA89390.1| FMN adenylyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 330

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 9/303 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI----KIANNSPITVLSFNPHPRTIIQSS 66
           Q L   +   VV IGNFDGIHLGH  I  + +    +I   S   V +F PHP  ++   
Sbjct: 8   QDLETPIDKAVVTIGNFDGIHLGHREIFRRIVTRSREIGGTS--VVYTFVPHPLKVLAPE 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                ++    +E ++E      LI   F+ + A   A +F+++VLVE + V  ++ G  
Sbjct: 66  RAPELINTYPEKEVLIEASCIDVLICAPFSRDLAELPAHRFVREVLVEKIGVSHLVVGYD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           + FGKDR+GD  +L++ GE  GF    +D +    + + SS+ +R  + +G + +   +L
Sbjct: 126 YLFGKDRSGDIELLRRMGEHLGFSVEVLDPIATGDT-VYSSTRVRELVRRGEMRDVVQVL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  +T E  V+HG   G  LGFPTAN++   +++   GVYA++ + +      GV N G+
Sbjct: 185 GRHYTFEGRVVHGFGRGSKLGFPTANLKTDKELMPCPGVYAVKVK-RGGVLIDGVLNLGQ 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT    G   +E  + DF  ++YG++  V F + LR E  F   E L   + ED ++AR
Sbjct: 244 NPTFCAAGS-FIEVHLLDFEGDLYGEKLRVYFVERLRDEKCFDGPESLMDAIREDIRRAR 302

Query: 307 KIL 309
            +L
Sbjct: 303 ALL 305


>gi|298485391|ref|ZP_07003481.1| Riboflavin kinase / FMN adenylyltransferase [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160089|gb|EFI01120.1| Riboflavin kinase / FMN adenylyltransferase [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 308

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++   S + +  F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVELGVLSCVVI--FEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R           L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPGIAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AASDFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E  F  +E L
Sbjct: 232 GKTWPGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQLFASLEAL 291

Query: 295 KIYMGEDEKKAR 306
           K  +  D   AR
Sbjct: 292 KTAINADVAAAR 303


>gi|187925132|ref|YP_001896774.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia phytofirmans PsJN]
 gi|187716326|gb|ACD17550.1| riboflavin biosynthesis protein RibF [Burkholderia phytofirmans
           PsJN]
          Length = 331

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDTFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G++YGF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFDSLKAAGQQYGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDSARAALGRDYLISGHVVHGMKLGRDLGFPTLNLAIAHKRPALSGIFVVRVHGVADEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|83814555|ref|YP_445892.1| riboflavin biosynthesis protein RibF [Salinibacter ruber DSM 13855]
 gi|83755949|gb|ABC44062.1| riboflavin biosynthesis protein RibF [Salinibacter ruber DSM 13855]
          Length = 311

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 14/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
           VV +G FDG+H GH  I+E  Q    A N P T++SF+PHPR ++     P+ T    ++
Sbjct: 17  VVTVGTFDGVHRGHQAIIEYLQDRAEAQNGPSTLVSFDPHPRAVVHDEEVPLLT----TV 72

Query: 78  QEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            E+  +LE++G    +   F+ + A  S   ++++VLV+ + V+ +  G   RFGKDRAG
Sbjct: 73  AERADLLERLGLDRFVVVPFSDDFAQLSPTAYVEEVLVDRIGVQEITVGYDHRFGKDRAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT-KGHVLNAAHLLGYRFTIES 194
           D   L++ G +YGF +V +   +     +VSS  IR+ L  +G V  A   LG  + ++ 
Sbjct: 133 DVEALRELGGEYGF-SVDVIPPQEVDHDVVSSRTIRSLLVEEGRVEQATDRLGRPYQLQG 191

Query: 195 DVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V  G+  GR LG+PTAN+ L  +  ++ K+GVYA      +     G+ N G  PT   
Sbjct: 192 VVSRGQGRGRKLGYPTANLALGDARKLVPKQGVYATAVTLPNGDRRGGMMNIGSRPTF-D 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              + +E  + D+  ++YG   +V F   LR E KF+  E L   + EDE++ R ++ +
Sbjct: 251 EMDVTVEVHLLDYEGDLYGASLSVEFLQRLRAEQKFESAEALAAQLSEDEERCRTVIRT 309


>gi|114331429|ref|YP_747651.1| riboflavin biosynthesis protein RibF [Nitrosomonas eutropha C91]
 gi|114308443|gb|ABI59686.1| riboflavin kinase / FMN adenylyltransferase [Nitrosomonas eutropha
           C91]
          Length = 325

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 156/293 (53%), Gaps = 18/293 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+HLGH  ++ +  + A    +   V++F PHPR ++        L+    +
Sbjct: 16  ALTIGNFDGVHLGHQAMIARLKRAARRLGAASCVMTFEPHPRELLMPDRAPARLTNLREK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L  +G   +  Y+F    A  SAE F+ ++L++ + V  ++ G  F FG  R+GD  
Sbjct: 76  LELLASLGVDRVQIYRFNHAFAKISAELFVTRILLQEMNVCWLLVGEDFCFGARRSGDVA 135

Query: 139 ILQKRGEKYG------FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           +LQK   + G         V +DELR      VSS+ +R AL    +  AA LLG  FT+
Sbjct: 136 LLQKLFSESGGRELEVMSPVVLDELR------VSSTAVRHALASDDLDLAAELLGRPFTM 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS----GVANFGRNP 248
              V+ G K+G+ LGFPTAN+QL     L  G++ +    ++ + ++    GVA+ G  P
Sbjct: 190 GGRVVDGLKLGKKLGFPTANIQLKDHHPLLNGIFVVEASWRNGSGFTQRVRGVASLGVRP 249

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           T++     +LE  +FDF ++IYGQR  + F   LR E KF D+E L   M +D
Sbjct: 250 TVLEYAQPVLEVHLFDFDEDIYGQRLRIEFLQKLRDEEKFPDMETLVKQMEQD 302


>gi|262191829|ref|ZP_06050000.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae CT
           5369-93]
 gi|297580805|ref|ZP_06942731.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC385]
 gi|262032316|gb|EEY50883.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae CT
           5369-93]
 gi|297535221|gb|EFH74056.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC385]
          Length = 322

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 153/301 (50%), Gaps = 20/301 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 133 QGNFALLQQAGQALGFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 187 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 247 T-VDGIRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|225012232|ref|ZP_03702669.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-2A]
 gi|225003787|gb|EEG41760.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-2A]
          Length = 312

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 7/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++ IG FDGIH+GH  IL+  +  A   N    VL+F PHPR ++Q  S I  +   
Sbjct: 14  KKSILTIGTFDGIHIGHQKILKSLVAQAKKENLLANVLTFFPHPRMVLQKESQIKLIDTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +E  L K+G   LI + F++  +  +A +FIQ +LV+ L++ ++  G   RFG++R  
Sbjct: 74  KEREDFLRKLGVDNLIIHPFSVAFSKLTALEFIQNILVKQLKIDSLYIGYDHRFGRNREA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  G++Y F  V I   +   +  VSS+ IR A+  G  +   H LG  F +   
Sbjct: 134 TVEDLKSYGQQYDFK-VNIISAQQIATIAVSSTKIREAIALGDFVKVHHFLGRPFQLRGT 192

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V  GE IGR L FPTAN+ ++    I+  +GVY +    +    Y G+ N G  PT+   
Sbjct: 193 VTKGEGIGRKLAFPTANLNVNIPYKIIPPQGVYLVSILLEKGVFY-GMMNIGTRPTLSGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               +E  IFDF++++YG+  TV  ++ +R E KF  +E LK  + +D+KK ++ L
Sbjct: 252 NE-SIEIHIFDFNEDLYGKMITVCLYEKIRDERKFDSLEALKTQLIKDKKKCKRTL 306


>gi|150024343|ref|YP_001295169.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Flavobacterium psychrophilum JIP02/86]
 gi|149770884|emb|CAL42349.1| Bifunctional riboflavin biosynthesis protein RibF : Riboflavin
           kinase and FMN adenylyltransferase [Flavobacterium
           psychrophilum JIP02/86]
          Length = 310

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 167/310 (53%), Gaps = 22/310 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V  +G FDG+HLGH  I+ + +    N  +   VL+F+ HPR+++Q  S I  L+  
Sbjct: 14  KKTVATLGTFDGVHLGHQKIISRLLNNTQNKHLESVVLTFSQHPRSVLQVESNIKLLNTN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +  +LEK G   LI + F    +  + E F++ +LV+ L +K +I G   RFGK+RA 
Sbjct: 74  AEKIALLEKKGIDNLIIHPFDASFSELTGEDFVKNILVDQLNIKKIIIGYDHRFGKNRAS 133

Query: 136 DRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           D   L   G+KY F         IDE+       +SS+ IR A+  G++  A   LGY +
Sbjct: 134 DIHDLIYFGKKYHFDVEQISAKEIDEIS------ISSTKIRKAIQDGNIKLANQYLGYNY 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
               +VI G+++GRT+GFPTAN+ +  +  I+ K GVY +    Q + ++ G+ N G  P
Sbjct: 188 LFAGNVIRGQQLGRTIGFPTANISIENTQKIIPKNGVYIVEGSWQGK-NHQGMMNIGTKP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      +E   F+ ++++Y    T+S  +++R E+KF  IE+LK  + +D     KI
Sbjct: 247 T-VDGKNTTIEVHFFNLNEDLYNLEITISVCEFIRAEVKFNSIEELKRQLQQD-----KI 300

Query: 309 LESSYPLSER 318
           +   Y  + R
Sbjct: 301 ISLDYFFNRR 310


>gi|73542429|ref|YP_296949.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           eutropha JMP134]
 gi|72119842|gb|AAZ62105.1| FMN adenylyltransferase / riboflavin kinase [Ralstonia eutropha
           JMP134]
          Length = 347

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 5/318 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 13  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 72

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 73  FTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAGQSPQAFVENVLWHGLHARWVL 132

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +     +I SSS +R AL  G + +A
Sbjct: 133 VGDDFRFGAKRAGDFTYLQDAGRRFGFDVEQMGSVSEGGIRI-SSSAVRQALADGDLEHA 191

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 192 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVNGIFVVQVHGIADHPVPGVA 251

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G +LLE  +FD ++ +YG+   V F   LR E +F ++E L   + +D 
Sbjct: 252 SIGVRPTIEDAGRVLLEVHLFDINENLYGKLIRVEFMKKLRDEARFDNLEDLTAAIAKDS 311

Query: 303 KKARKILESSYPLSERDR 320
            +AR     + P +   R
Sbjct: 312 AEARAFFGLTAPDAHTGR 329


>gi|15895082|ref|NP_348431.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           acetobutylicum ATCC 824]
 gi|15024779|gb|AAK79771.1|AE007689_9 Riboflavin kinase/FAD synthase [Clostridium acetobutylicum ATCC
           824]
 gi|325509220|gb|ADZ20856.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           acetobutylicum EA 2018]
          Length = 303

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG+FDGIH+GH  ++++AI ++  NN+   + +F  HP  +I  S     L     + 
Sbjct: 18  VTIGSFDGIHMGHLSLIKKAISLSKKNNTMSMLSTFKEHPLNVINKSIVPKILMDNETKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +IL+ +G   L  + F  E      E FI  ++  +  +  +ITG   RFG   +GD  +
Sbjct: 78  EILKSIGLDILNFFDFNEEIMKMMPEDFILNMINHY-NIDGIITGFNHRFGYKNSGDIHL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+   EKYGF    +  + + K+ +VSS+ IR  ++ G++  A  +L   F+I++ VIHG
Sbjct: 137 LKTLSEKYGFELYVLPPV-SFKNDMVSSTRIRNCISDGNIEEANQMLLRPFSIKAKVIHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +IGR +GFPTAN+      +L K GVY       ++ +Y G+ N G NPT V    L +
Sbjct: 196 REIGRQIGFPTANLSYDNKFILPKIGVYYTTVE-YNKITYKGITNVGTNPT-VNGDKLTI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E++I DF+Q IY +   V+F   +R +IKF+ IE+LK+ + +D+K A K
Sbjct: 254 ETYILDFNQNIYDEEIRVNFVKKIRDQIKFESIEQLKVQLEKDKKFAYK 302


>gi|261823082|ref|YP_003261188.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261607095|gb|ACX89581.1| riboflavin biosynthesis protein RibF [Pectobacterium wasabiae
           WPP163]
          Length = 313

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 156/306 (50%), Gaps = 3/306 (0%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPI 69
           +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P P  +  +    
Sbjct: 9   NLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQPLELFATEKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + K L + G   L+  KF    A   A+ F+  +LV+ L VK ++ G  FRF
Sbjct: 69  ARLTRLRDKVKYLAQAGVDYLLCVKFDACFAANDAQTFVSSLLVKKLGVKFLVVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQK G + GF  +  +   N   + VSS+ +R AL++  +  A  LLG+ 
Sbjct: 129 GAGRQGDFLLLQKAGRESGFDVISTNSFCNGGKR-VSSTAVREALSRDELELAESLLGHP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      +    GVAN G  PT
Sbjct: 188 YCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGEEPLPGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  +    LE  + D +  +YG+   V     +R E +F  ++ LK  + +D   AR   
Sbjct: 248 VNGDRRQQLEVHLLDVTMNLYGRHIEVVLRKKIRNEQRFASLDALKQQIADDVVTARTFF 307

Query: 310 ESSYPL 315
               P+
Sbjct: 308 GLKTPV 313


>gi|328957416|ref|YP_004374802.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Carnobacterium sp. 17-4]
 gi|328673740|gb|AEB29786.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Carnobacterium sp. 17-4]
          Length = 325

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 167/304 (54%), Gaps = 9/304 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF--TLSPPS 76
           V+A+G FDG+H GH  ++ +A KIA  N   + V++FN HP  + +  +P     LS  S
Sbjct: 21  VLALGFFDGVHRGHQEVIGRAKKIAEKNQLKLAVMTFNQHPSIVFKKLNPDHHKYLSTIS 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+++ K+G   L    FT   A  + ++F+++ ++  L  +TV+ G  + FGK     
Sbjct: 81  RKEELMGKIGVDFLYEVDFTSAFAGLTPQEFVEQYII-GLHAQTVVAGFDYSFGKKEVAS 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L     K  F  V + E + +K   +SS+ IR AL  G +  A +LLGY +     V
Sbjct: 140 MEHLPLYA-KDRFEIVVV-EKQLSKEDKISSTRIRLALEVGDMDAANNLLGYVYATPGRV 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GR LGFPTAN+++   + L + GVYA+      Q  Y G+A+ G N T  PN P
Sbjct: 198 VHGDARGRLLGFPTANIEVENFVKLPRIGVYAVEISVGGQV-YKGMASIGHNVTFEPNRP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           L +E +I DF+++IYG+  TV ++DYLR E KF  I+ L   + +DE       E+   L
Sbjct: 257 LTVEVYILDFNEDIYGENVTVFWYDYLRNEEKFDSIDALIAQLKQDELDTAHFFENYKGL 316

Query: 316 SERD 319
           + ++
Sbjct: 317 THKN 320


>gi|313672440|ref|YP_004050551.1| riboflavin biosynthesis protein ribf [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939196|gb|ADR18388.1| riboflavin biosynthesis protein RibF [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 307

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 162/292 (55%), Gaps = 6/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +GNFDG+H+GH  I+E+ + IA    I   V++F+PHP         +  L+    + 
Sbjct: 18  ITLGNFDGVHIGHTRIIEKTVNIARGYGIKSVVVTFDPHPMAFFGQRVDL--LTNLEKKN 75

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +ILE MG    +   F  E      E FI++++V+ L+ K V+ G  ++FG  R GD  +
Sbjct: 76  QILETMGVDFHLVMSFNRELMMMDPEVFIREIIVKRLKAKYVVVGYDYKFGSRRKGDFEL 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    +YG+     D++  + +  VSSSNIR  L +G++  A  +LG  +++   V+ G
Sbjct: 136 LKIFSSRYGYEAYRYDKVVVD-NMTVSSSNIRNLLKEGNLSLANKMLGRYYSVLGQVVKG 194

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IGR L +PTAN+ ++  ++ K GVYA      D   Y  V N G  PT+     L +E
Sbjct: 195 DGIGRLLSYPTANIVVADFLIPKYGVYATLIDI-DGKIYPCVTNVGVRPTIPGKNELRIE 253

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           SFIFDF+ +IY +   + F  ++R E+KF++ + LK  +  D + A+ IL++
Sbjct: 254 SFIFDFNDDIYNKNVELFFVQFIRDEMKFENFDDLKNRIAIDCEVAKNILDN 305


>gi|163803543|ref|ZP_02197412.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio sp.
           AND4]
 gi|159172678|gb|EDP57531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio sp.
           AND4]
          Length = 311

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 157/296 (53%), Gaps = 16/296 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +   +     L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQPMELFARNKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+    L+   F    A+ +AE+FI+ +LV  L VK ++ G  F FGK R G+
Sbjct: 76  DKFVQLSKLDIDRLLCVNFNRRFADLTAEEFIRDLLVGRLGVKFLVVGDDFCFGKGRTGN 135

Query: 137 RGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ+ G+K+GF  V      + +LR      VSS+ IR AL +  +  A  +LG  ++
Sbjct: 136 FAMLQEAGKKHGFEVVSTQSFCLQQLR------VSSTAIRQALARDDLDCAQEMLGRDYS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   +    GVY ++    +   + GVAN G+ PT+ 
Sbjct: 190 IAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQVLGLEDKPFGGVANIGKRPTV- 248

Query: 252 PNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            NG    LE  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR
Sbjct: 249 -NGVRQQLEVHLFDFHANLYGKQLEVELLLKLRDEQKFESFEALKQQIELDAEAAR 303


>gi|251788187|ref|YP_003002908.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dickeya
           zeae Ech1591]
 gi|247536808|gb|ACT05429.1| riboflavin biosynthesis protein RibF [Dickeya zeae Ech1591]
          Length = 313

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 3/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQPLELFAPEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+   F    A   A+ FI  +LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKVKYLAQAGVDYLLCVTFDAGFAANHADTFISSLLVEKLGVKFLVVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +  F  +      ++  + VSS+ +R AL + ++  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGAEQNFEVISTATFCSSGKR-VSSTAVREALAQDNLALAQELLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GRT+GFPTAN+ L   +    GVYA++     +T   GVAN G  PT+  +   
Sbjct: 195 VHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGETPLPGVANIGTRPTVTGDKRQ 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   AR+      P+
Sbjct: 255 QLEVHLLDVTLDLYGRHIDVVMCKKLRSEQRFASLDALKQQIADDVVAAREFFGLKAPV 313


>gi|229918672|ref|YP_002887318.1| riboflavin biosynthesis protein RibF [Exiguobacterium sp. AT1b]
 gi|229470101|gb|ACQ71873.1| riboflavin biosynthesis protein RibF [Exiguobacterium sp. AT1b]
          Length = 308

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 157/293 (53%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSS-SPIFTLSPPSI 77
           V+ +G FDG+H GH  ++  A ++A  +N P+TV++F+PHP+ ++ +    +  ++P S 
Sbjct: 18  VMVLGFFDGVHKGHQAVIHHAKRVAAEHNLPVTVVTFDPHPKQVLSNKPDAVRYITPLSR 77

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + K +E +G    +   FT E A  S +QF+   L+    V  V  G  + +GK   G  
Sbjct: 78  KLKRIEALGVERCLVLTFTKELAGLSPQQFVDDYLIGAGAVH-VTAGFDYSYGKFGEGTM 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L        F T  + E +    + VSS+ IR  L +G V  A  LLG  + I  +VI
Sbjct: 137 ETLPYHARDQ-FTTSVVTE-QTMTGEKVSSTRIRKLLAEGSVDEAHELLGSPYVICGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+  GRT+GFPTAN+ +    ++ + GVYA R    D  ++  + N GR PT    G +
Sbjct: 195 HGDARGRTIGFPTANVLMDASYVMPRLGVYATRVTLPDGRTFRAMTNVGRRPTFYETGSV 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +ES +FDFS+++YGQ   + +  Y+R E  F  ++ L   + EDE  AR IL
Sbjct: 255 SVESHLFDFSEDLYGQVIEIEWIQYIRNERAFDGLDALVAQLKEDEVAARSIL 307


>gi|304436488|ref|ZP_07396462.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304370534|gb|EFM24185.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 323

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 160/306 (52%), Gaps = 11/306 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           K  VVA+G FDG+H+GH  I+    EQA +I   +   V SF  HPRTI+ S      +S
Sbjct: 19  KNIVVALGMFDGLHIGHQKIIRTASEQASRIHGTT--FVFSFTNHPRTIVDSLGAPRRIS 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +  +IL  +G   L+   FT + A+ S E+FI  +L      + ++ G  + FGK  
Sbjct: 77  SEQVSLRILRNLGVDVLVEIPFTHDFADTSPEEFIH-LLYRHFSPRYIVVGENYTFGKKG 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           AG   +L   G++Y   T+    +  +   I SS+ IRT + +G + +   LLGY FT+ 
Sbjct: 136 AGTPQLLHDMGKRYTIETIVCSSVLYDGEPI-SSTRIRTYIEQGDITHVNELLGYPFTMI 194

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIHG+  GR LGFPTAN+ L     +L  GVYA+      +  YS VAN G NPT   
Sbjct: 195 GTVIHGQARGRLLGFPTANIALRESYEILPNGVYAVTVVYHHRI-YSAVANIGNNPTF-G 252

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
                +E  I DF  ++YG++  VSF   +R E +F  +E L   +  D++ A  + + +
Sbjct: 253 LCDRRMEVHIMDFDGDLYGKKILVSFHKRIRSETRFDSVEALISQIKSDKECAECVFQET 312

Query: 313 YPLSER 318
           + L E+
Sbjct: 313 FHLQEK 318


>gi|227499292|ref|ZP_03929404.1| possible FAD synthetase [Anaerococcus tetradius ATCC 35098]
 gi|227218643|gb|EEI83877.1| possible FAD synthetase [Anaerococcus tetradius ATCC 35098]
          Length = 312

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 168/307 (54%), Gaps = 8/307 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS 65
           ++N  LP+ L+   V++GNFDG+HLGH  +++  ++I+    +   VL F  + +  ++ 
Sbjct: 9   DLNIDLPD-LQRKAVSLGNFDGVHLGHQKLMKNNLEISKKYDLEPAVLLFKQNTKLRLKD 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                T     I+  IL  +G        F  +  N S  +FI +++ + L    +I G 
Sbjct: 68  EKEYMTSLEDKIE--ILSSIGIHTFCLIDFDEKFMNLSPREFIAEIINKKLNASYIICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFGK  +GD   L+K  E+Y + T  +D  + ++   +SS+++R  + +G++     L
Sbjct: 126 DYRFGKKASGDVDTLEKYEERYNYKTSVVDFEKEDEFNKISSNHLRDLIREGNIKKVNKL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANF 244
           L   + I+  ++ G K GRTL FPTAN++LS + +L  +GVY  R    D  SY  ++N 
Sbjct: 186 LARPYKIKGTIVDGMKRGRTLNFPTANLKLSFNYVLPIDGVYLTRINI-DNKSYYALSNV 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G+NPT   N    +E++I DF Q IYG+  ++ F ++ R +IKF   E+L   M  D+K+
Sbjct: 245 GKNPTFGENSR-KVETYILDFDQNIYGENVSIEFLEFFRYDIKFTSREELIEQMNIDKKR 303

Query: 305 ARKILES 311
           A K LE+
Sbjct: 304 AYKYLEN 310


>gi|22127575|ref|NP_670998.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis KIM 10]
 gi|45443438|ref|NP_994977.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51594967|ref|YP_069158.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108810057|ref|YP_653973.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Antiqua]
 gi|108810511|ref|YP_646278.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Nepal516]
 gi|145600413|ref|YP_001164489.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Pestoides F]
 gi|150260490|ref|ZP_01917218.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CA88-4125]
 gi|153948228|ref|YP_001402416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162420878|ref|YP_001605366.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Angola]
 gi|165927256|ref|ZP_02223088.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937880|ref|ZP_02226441.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008814|ref|ZP_02229712.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212053|ref|ZP_02238088.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401586|ref|ZP_02307080.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418778|ref|ZP_02310531.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426070|ref|ZP_02317823.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469839|ref|ZP_02334543.1| riboflavin biosynthesis protein RibF [Yersinia pestis FV-1]
 gi|186893969|ref|YP_001871081.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|218927671|ref|YP_002345546.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CO92]
 gi|229836944|ref|ZP_04457109.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Pestoides A]
 gi|229840361|ref|ZP_04460520.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842441|ref|ZP_04462596.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229900700|ref|ZP_04515824.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Nepal516]
 gi|270487932|ref|ZP_06205006.1| riboflavin biosynthesis protein RibF [Yersinia pestis KIM D27]
 gi|21960681|gb|AAM87249.1|AE013973_8 putative regulator [Yersinia pestis KIM 10]
 gi|45438307|gb|AAS63854.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588249|emb|CAH19856.1| flavokinase and FAD synthetase (includes: riboflavin kinase and FMN
           adenyltransferase) [Yersinia pseudotuberculosis IP
           32953]
 gi|108774159|gb|ABG16678.1| riboflavin kinase / FMN adenylyltransferase [Yersinia pestis
           Nepal516]
 gi|108781970|gb|ABG16028.1| FMN adenylyltransferase / riboflavin kinase [Yersinia pestis
           Antiqua]
 gi|115346282|emb|CAL19153.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia pestis CO92]
 gi|145212109|gb|ABP41516.1| FMN adenylyltransferase / riboflavin kinase [Yersinia pestis
           Pestoides F]
 gi|149289898|gb|EDM39975.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CA88-4125]
 gi|152959723|gb|ABS47184.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353693|gb|ABX87641.1| riboflavin biosynthesis protein RibF [Yersinia pestis Angola]
 gi|165914292|gb|EDR32908.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920718|gb|EDR37966.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992153|gb|EDR44454.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206799|gb|EDR51279.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962772|gb|EDR58793.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167048968|gb|EDR60376.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054993|gb|EDR64793.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186696995|gb|ACC87624.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682039|gb|EEO78131.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Nepal516]
 gi|229690751|gb|EEO82805.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696727|gb|EEO86774.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705887|gb|EEO91896.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Pestoides A]
 gi|270336436|gb|EFA47213.1| riboflavin biosynthesis protein RibF [Yersinia pestis KIM D27]
 gi|320016962|gb|ADW00534.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 312

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD
Sbjct: 76  DKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V
Sbjct: 136 FQLLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDDLVLAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPLYGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG    V     LR E +F  +E LK  +  D   AR       P+
Sbjct: 254 QLEVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQIANDVVTARTFFGLKTPV 312


>gi|15924262|ref|NP_371796.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926855|ref|NP_374388.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus N315]
 gi|21282884|ref|NP_645972.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus MW2]
 gi|57651842|ref|YP_186148.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus COL]
 gi|82750873|ref|YP_416614.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus RF122]
 gi|87161758|ref|YP_493862.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194982|ref|YP_499782.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221393|ref|YP_001332215.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156979593|ref|YP_001441852.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161509438|ref|YP_001575097.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142506|ref|ZP_03566999.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253316408|ref|ZP_04839621.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253731891|ref|ZP_04866056.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733490|ref|ZP_04867655.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006059|ref|ZP_05144660.2| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257425326|ref|ZP_05601751.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257427987|ref|ZP_05604385.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257430620|ref|ZP_05607002.1| riboflavin kinase/FAD synthase ribC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433380|ref|ZP_05609738.1| riboflavin kinase/FAD synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436222|ref|ZP_05612269.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M876]
 gi|258423887|ref|ZP_05686772.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9635]
 gi|258434814|ref|ZP_05688888.1| riboflavin kinase/FAD synthase [Staphylococcus aureus A9299]
 gi|258444610|ref|ZP_05692939.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A8115]
 gi|258452571|ref|ZP_05700577.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A5948]
 gi|262048161|ref|ZP_06021048.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus D30]
 gi|262051334|ref|ZP_06023557.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus
           930918-3]
 gi|269202889|ref|YP_003282158.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892760|ref|ZP_06300995.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8117]
 gi|282910844|ref|ZP_06318647.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914049|ref|ZP_06321836.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M899]
 gi|282916532|ref|ZP_06324290.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus D139]
 gi|282918971|ref|ZP_06326706.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C427]
 gi|282920516|ref|ZP_06328237.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9765]
 gi|282924094|ref|ZP_06331770.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C101]
 gi|284024265|ref|ZP_06378663.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501081|ref|ZP_06666932.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293526629|ref|ZP_06671314.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M1015]
 gi|297208082|ref|ZP_06924513.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912163|ref|ZP_07129606.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381164|ref|ZP_07363817.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13701072|dbj|BAB42367.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus N315]
 gi|14247042|dbj|BAB57434.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21204323|dbj|BAB95020.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus MW2]
 gi|57286028|gb|AAW38122.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus COL]
 gi|82656404|emb|CAI80823.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus RF122]
 gi|87127732|gb|ABD22246.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87202540|gb|ABD30350.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374193|dbj|BAF67453.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721728|dbj|BAF78145.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160368247|gb|ABX29218.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253724301|gb|EES93030.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728544|gb|EES97273.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257271783|gb|EEV03921.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274828|gb|EEV06315.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278748|gb|EEV09367.1| riboflavin kinase/FAD synthase ribC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281473|gb|EEV11610.1| riboflavin kinase/FAD synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284504|gb|EEV14624.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M876]
 gi|257845916|gb|EEV69945.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9635]
 gi|257849175|gb|EEV73157.1| riboflavin kinase/FAD synthase [Staphylococcus aureus A9299]
 gi|257850103|gb|EEV74056.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A8115]
 gi|257859789|gb|EEV82631.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A5948]
 gi|259160709|gb|EEW45730.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus
           930918-3]
 gi|259163727|gb|EEW48282.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus D30]
 gi|262075179|gb|ACY11152.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269940763|emb|CBI49145.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282314066|gb|EFB44458.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316781|gb|EFB47155.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C427]
 gi|282319019|gb|EFB49371.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus D139]
 gi|282322117|gb|EFB52441.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325449|gb|EFB55758.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282594178|gb|EFB99165.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9765]
 gi|282764757|gb|EFC04882.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8117]
 gi|283470487|emb|CAQ49698.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ST398]
 gi|290920701|gb|EFD97764.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096086|gb|EFE26347.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|296887325|gb|EFH26227.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886409|gb|EFK81611.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332878|gb|ADL23071.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302751095|gb|ADL65272.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340147|gb|EFM06088.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312438348|gb|ADQ77419.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312829666|emb|CBX34508.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315198514|gb|EFU28843.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320140911|gb|EFW32758.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144373|gb|EFW36139.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329727796|gb|EGG64247.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733553|gb|EGG69881.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 323

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|319892290|ref|YP_004149165.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161986|gb|ADV05529.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464613|gb|ADX76766.1| riboflavin biosynthesis protein RibF [Staphylococcus
           pseudintermedius ED99]
          Length = 323

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 174/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + + H I+  Q +   +    +A+G FDG+H GH  + ++  ++A    +   V++F+PH
Sbjct: 4   IEITHPIQAEQYIQEDV---AMALGFFDGLHRGHQALFDELDRVAKEKDLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T ++P   + ++L +      +   F+   A  + ++F+Q  LV+   
Sbjct: 61  PSVVLNPKQKRTTYITPLDDKIELLGEQNIDYCLVVNFSSRFAEVTPDEFVQDYLVK-NH 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + +I G  F FGK   G+  +LQ+   ++   T+   +L   K   +S++ IR AL  G
Sbjct: 120 ARVIIAGFDFTFGKYGKGNMAMLQEYQAQFESITIGKQDLNREK---ISTTAIREALKTG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFR--TQD 234
           H+  A   LGYR+ ++  V+ GEK GRT+GFPTAN++ S D +    GVYA+     + D
Sbjct: 177 HLAKANEQLGYRYRMKGTVVQGEKRGRTIGFPTANIEPSDDYVWPTLGVYAVSMTIGSSD 236

Query: 235 QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           Q  Y GVAN G  PT   + P  ++E  IFDF++ IYG+R T+ +  Y+RPE+KF  I+ 
Sbjct: 237 QI-YRGVANIGVKPTFHDDLPQAVIEVNIFDFTENIYGERVTIYWHHYIRPELKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVAQMNDDKARAKHLLAVDF 315


>gi|254282210|ref|ZP_04957178.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           NOR51-B]
 gi|219678413|gb|EED34762.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           NOR51-B]
          Length = 318

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 158/312 (50%), Gaps = 13/312 (4%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE----QAIKIANNSPITVLSFNPHP 59
            HN+      P H +G    +G FDG+HLGH  +LE    +A ++   S  TV+ F P P
Sbjct: 7   LHNLR-----PRH-RGCAATVGAFDGVHLGHRAVLEHLKSEAARLGVAS--TVIFFEPLP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R   Q       L     +   L  +G    +  +F     N SA+ FI+ V    LE +
Sbjct: 59  REYFQPLEAPARLMNFREKCVALRDVGIDQALCLRFDERVRNMSADGFIEAVFSRGLEAQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFGK R GD   + +R ++YG+       L  +  + VSS+ IR AL +G  
Sbjct: 119 YIAIGDDFRFGKSREGDLRYMAERAQEYGYEVRSTSTLARSGER-VSSTRIRAALAEGDF 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             AA LLG RF +   V+HG+++GR LGFPTAN+ L       +GV+ +    +   S  
Sbjct: 178 QLAAELLGRRFVMGGRVLHGKQLGRQLGFPTANIALHRLRAPVQGVFVVSVTGEGLDSVP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            +AN G  PT+  +    LE  + D  +++YG+R TV+F   LR E KF+ IE L+  + 
Sbjct: 238 ALANVGVRPTVEDSIRANLEVHLIDVDEDLYGRRLTVNFLHKLRDENKFEGIEALRAAIS 297

Query: 300 EDEKKARKILES 311
            D ++AR+ L +
Sbjct: 298 NDLEQARQWLAT 309


>gi|229530487|ref|ZP_04419875.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           12129(1)]
 gi|229332260|gb|EEN97748.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           12129(1)]
          Length = 455

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 153/302 (50%), Gaps = 20/302 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 149 GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 208

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 209 DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 265

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 266 QGNFALLQQAGQALGFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 319

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 320 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 379

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 380 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 438

Query: 309 LE 310
           L 
Sbjct: 439 LR 440


>gi|259907373|ref|YP_002647729.1| Riboflavin biosynthesis protein [Erwinia pyrifoliae Ep1/96]
 gi|224962995|emb|CAX54478.1| Riboflavin biosynthesis protein [Erwinia pyrifoliae Ep1/96]
 gi|283477204|emb|CAY73111.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           pyrifoliae DSM 12163]
          Length = 314

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L Q          P+ V+ F P P  +  +      L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLAQLCAEGRRRHLPVVVMLFEPQPLELFTADKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + LE+ G   ++   F    A YSA++FI  +LV  L V+ +  G  FRFG  R G
Sbjct: 75  REKLRYLEQAGVDTVLCVGFDRHFAAYSAQRFITDLLVNKLGVQLLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF+ +      +   +I SS+ +R AL    +  A  LLG  F+I   
Sbjct: 135 DFLLLQKAGVEYGFNVISTQTFCDGGKRI-SSTAVRQALAADDLPLAQSLLGRPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRT+GFPTAN+ L   +   +GVYA+      + +  GVAN G  PT V    
Sbjct: 194 VVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGERALPGVANIGTRPT-VAGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V   D +R E +F  ++ LK  +  D   AR+
Sbjct: 253 QQLEVHLLDVTIDLYGRYIDVVLLDKIRDEQRFTSLDALKEQIANDVVTARR 304


>gi|49486111|ref|YP_043332.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|49244554|emb|CAG42983.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
          Length = 323

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 170/312 (54%), Gaps = 16/312 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           QS   + +   +A G FDG+H GH  + +   +IA    +   V++F+PHP  ++     
Sbjct: 11  QSKQYNTEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPHPSVVLNPKRK 70

Query: 69  IFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             T L+P S + + + +      I   F+   AN S E F++  +++   VK VI G  F
Sbjct: 71  RTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-NVKEVIAGFDF 129

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L  G +  A   
Sbjct: 130 TFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLINGELQKANDA 183

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-YSGVAN 243
           LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      +   Y GVAN
Sbjct: 184 LGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTENKLYRGVAN 243

Query: 244 FGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ L   M +D
Sbjct: 244 IGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDPLVKQMNDD 303

Query: 302 EKKARKILESSY 313
           + +A+ +L   +
Sbjct: 304 KSRAKYLLAVDF 315


>gi|307730762|ref|YP_003907986.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1003]
 gi|307585297|gb|ADN58695.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1003]
          Length = 331

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G++YGF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGARRAGDFASLKAAGQQYGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVTDEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|302879259|ref|YP_003847823.1| riboflavin biosynthesis protein RibF [Gallionella capsiferriformans
           ES-2]
 gi|302582048|gb|ADL56059.1| riboflavin biosynthesis protein RibF [Gallionella capsiferriformans
           ES-2]
          Length = 323

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 8/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+H GH  +L Q  A   A   P  V+ F PHPR      +    LS  S++
Sbjct: 31  ALTIGNFDGVHRGHQALLNQLKAAAAARGLPTAVVIFEPHPREFFTPDTAPARLS--SLR 88

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+   E+ G   +   +F    A  SA  FI + L + L  K V+ G  FRFG  R GD
Sbjct: 89  EKLALFEQFGIDRVQVCRFDARLAQMSAADFI-RALHQKLNAKFVLIGDDFRFGSGRIGD 147

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +++K GE+ GF    +  + ++  +I SS+ +R AL  G +      LG  ++I   V
Sbjct: 148 FALMEKIGEQQGFEVQAVQSVTHDGVRI-SSTAVRAALAAGQMRRCHDYLGRTYSISGRV 206

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GR LG+PTAN+Q+  +     G++ +    +      GVA+ G  PT+      
Sbjct: 207 VHGDGVGRKLGYPTANIQIKHNRPPLSGIFVVEAHAEGLGILQGVASLGVRPTLKHQARP 266

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +LE  +F+F Q+IYG+R  V F    R E KF D+  L   +  D + A+K  E
Sbjct: 267 ILEVHLFEFKQDIYGKRLRVEFLQKRRDEQKFPDVGALTRQIALDVENAKKWFE 320


>gi|153834673|ref|ZP_01987340.1| riboflavin biosynthesis protein RibF [Vibrio harveyi HY01]
 gi|148868925|gb|EDL67983.1| riboflavin biosynthesis protein RibF [Vibrio harveyi HY01]
          Length = 323

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 16/296 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +         L+   
Sbjct: 28  GCVLTIGNFDGVHRGHQRVLQQVSEQAEKLSLPSVVMTFEPQPMELFARDKAPARLTRLR 87

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+    L+   F    A+ +AE+FI+ +LV  L VK ++ G  F FGK R G+
Sbjct: 88  DKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGVKFLVIGDDFCFGKGRTGN 147

Query: 137 RGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ+ GEKYGF  V      + +LR      VSS+ IR AL +  + +A  +LG  ++
Sbjct: 148 FTMLQEAGEKYGFEVVSTQSFCLQQLR------VSSTAIRKALARDDLHSAQEMLGRDYS 201

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+ 
Sbjct: 202 IAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPVGGVANIGQRPTV- 260

Query: 252 PNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            NG    LE  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR
Sbjct: 261 -NGVRQQLEIHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAAR 315


>gi|254473541|ref|ZP_05086937.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
 gi|211957253|gb|EEA92457.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
          Length = 221

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 2/209 (0%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP 59
           H F +I      P  L+GGVVAIGNFDG+H GH  +L+ A   A     P   ++F PHP
Sbjct: 9   HSFQHITDLAQFPEKLRGGVVAIGNFDGVHRGHRAVLDLARDEAAKRGVPALAMTFEPHP 68

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           RT  +   P+F L+P  I+ +ILE      +I   FT E A+ +AE F++ +LV+ L + 
Sbjct: 69  RTFFRPEQPVFRLTPSHIKAEILEAEHLDGVIELPFTKEFASMAAEDFVKDILVDRLGIS 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
             ITG  F FGK R G    L++ GE +GF    +    +   +++SSS IR AL +G +
Sbjct: 129 QSITGYDFHFGKGRQGTPEFLREAGEAHGFAVTIVGAEGDEGGEVISSSRIRAALGEGDL 188

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGF 208
             A  LLGYR+ +E+ V HGEK GR LG+
Sbjct: 189 AVANGLLGYRYFVEATVQHGEKRGRELGY 217


>gi|70726642|ref|YP_253556.1| riboflavin kinase / FAD synthase ribC [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447366|dbj|BAE04950.1| riboflavin kinase / FAD synthase ribC [Staphylococcus haemolyticus
           JCSC1435]
          Length = 323

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 174/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           + V H I+ +Q +   +    +A G FDG+H GHH + E   +   A N    V +F+PH
Sbjct: 4   IEVTHPIQEDQLIKEDV---AMAFGFFDGMHRGHHKVFEALDERAAAQNLKKAVTTFDPH 60

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E+      I   F+   A+ +AE+F+Q  ++    
Sbjct: 61  PSVVLNPERKRTDYLTPLSDKLEMIEQHDVDYCIVINFSSRFASVTAEEFVQDYIINN-R 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F +GK   G+  +L +  E   F T  + + +  +++ +S++ IR AL +G
Sbjct: 120 VKEVIAGFDFTYGKFGKGNMSVLNEMDE---FSTTIVGK-QEMETEKISTTAIREALKEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      + 
Sbjct: 176 NLKKANEQLGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMAIGAEN 235

Query: 237 S-YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF+  IYG+R  V +  YLRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFNDNIYGERVIVYWHHYLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M  D++KA+ +L   +
Sbjct: 296 LVEQMNNDKEKAKYLLSVDF 315


>gi|269120797|ref|YP_003308974.1| riboflavin biosynthesis protein RibF [Sebaldella termitidis ATCC
           33386]
 gi|268614675|gb|ACZ09043.1| riboflavin biosynthesis protein RibF [Sebaldella termitidis ATCC
           33386]
          Length = 314

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 171/303 (56%), Gaps = 11/303 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVL-SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ +GNFDGIHLGH  ++++ I+ + ++   TVL +F  H    I+    + T +   I 
Sbjct: 18  IIILGNFDGIHLGHQELIKRGIECSEDTEYKTVLYTFKTHTNQNIK----LLTNNEEKIL 73

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L+K     +   +F  E  N S E+FIQK++++ L    VI G  F F K+++G+  
Sbjct: 74  --LLKKFNLDYVYFEEFD-EVKNLSPEEFIQKIIIDRLHSDKVICGFDFTFSKNKSGNTD 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K G++     V ID +++   +++SS+ +R  +  G++  A  LLG+   I  +V+H
Sbjct: 131 LLKKLGQEKNVKVVVIDSVKDESGEVISSTRVRKYIEDGNLSEATKLLGHYPIIAGEVVH 190

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLL 257
           G+K+ R +GFPTAN+     +    GVY +  + + D   Y+GV N G+NPT+ P G L 
Sbjct: 191 GKKMARQMGFPTANLIFENKVYPPFGVYGVYVKIEGDNNIYNGVMNLGKNPTLKP-GELS 249

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E  I +F + IYG++  +   + +  EIKF  I++L   +G D K  +K ++  Y  ++
Sbjct: 250 VEVHILNFDKFIYGEKIIIYVLEKISDEIKFNGIDQLVEKIGNDVKYWKKKVKDEYGNTD 309

Query: 318 RDR 320
           + R
Sbjct: 310 KTR 312


>gi|228475006|ref|ZP_04059734.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis SK119]
 gi|228270991|gb|EEK12379.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis SK119]
          Length = 323

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 176/318 (55%), Gaps = 17/318 (5%)

Query: 7   IEINQSLPNH--LKGGV-VAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR 60
           IEI   + N   +K  V +A G FDG+H GH  + E A+ I     N    V +F+PHP 
Sbjct: 4   IEITHPIQNEQLIKEDVAMAFGFFDGMHRGHSKVFE-ALDIRAKEKNLKKAVTTFDPHPS 62

Query: 61  TIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++         L+P S + +++E+      I   F+   AN +AE+FI+  ++    VK
Sbjct: 63  VVLNPERKRTDYLTPLSDKLEMIEQHDIDYCIVINFSSRFANVTAEEFIKDYIINN-HVK 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FGK   G+  +L +  E   F+T  + +L +  S+ +S+++IR AL +G++
Sbjct: 122 EVVAGFDFTFGKFGKGNMAVLNEIDE---FNTTIVGKL-DLDSEKISTTSIRQALHEGNL 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT-QDQTS 237
             A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      +   
Sbjct: 178 QKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEHKI 237

Query: 238 YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           Y GVAN G  PT        +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ L 
Sbjct: 238 YRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDALV 297

Query: 296 IYMGEDEKKARKILESSY 313
             M +D+++A+ +L   +
Sbjct: 298 SQMNDDKERAKYLLAVDF 315


>gi|329313942|gb|AEB88355.1| Riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 323

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSIEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|296157164|ref|ZP_06840000.1| riboflavin biosynthesis protein RibF [Burkholderia sp. Ch1-1]
 gi|295892500|gb|EFG72282.1| riboflavin biosynthesis protein RibF [Burkholderia sp. Ch1-1]
          Length = 331

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDSARAALGRDYVISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVGDEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|229512428|ref|ZP_04401902.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TMA 21]
 gi|229519955|ref|ZP_04409385.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229525333|ref|ZP_04414738.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229338914|gb|EEO03931.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229343007|gb|EEO07995.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229350578|gb|EEO15524.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TMA 21]
          Length = 455

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 153/302 (50%), Gaps = 20/302 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 149 GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 208

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 209 DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 265

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+  GF  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 266 QGNFALLQQAGQALGFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 319

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 320 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 379

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 380 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 438

Query: 309 LE 310
           L 
Sbjct: 439 LR 440


>gi|330466371|ref|YP_004404114.1| riboflavin biosynthesis protein RibF [Verrucosispora maris
           AB-18-032]
 gi|328809342|gb|AEB43514.1| riboflavin biosynthesis protein RibF [Verrucosispora maris
           AB-18-032]
          Length = 309

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 6/304 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
            + P      VV IG FDG+H GH   +  A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   DAAPGGWGRAVVTIGVFDGVHKGHQATIGYAVARARELGVQSVVVTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+ P+ + +++E +G   L    FT E +   AE F+  VLVE L    V+ G  FR
Sbjct: 68  PAVLTEPARKAELIEALGVDVLCVVPFTPEFSRLPAEAFVHDVLVEHLHAALVVVGDNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD  +L++ G  +GF  V    L      + SS+ IR+ +  G V  AA  LG 
Sbjct: 128 FGHRAAGDVALLEQLGRTFGF-AVESAPLVAEAGTVFSSTYIRSCVDAGDVTAAASALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVA-NFGR 246
              +E  V+ G++ GR LGFPTAN+       +  +G+YA R   + +    G A + G 
Sbjct: 187 PHRLEGVVVRGDQRGRELGFPTANLLCHRYAAIPADGIYAARLIRRGRREPLGAAVSIGT 246

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT        +E++  DF+ ++YG+R  + F  +LR +I+F  IE L   + +D ++ R
Sbjct: 247 NPTF-SGRERRVEAYALDFTGDLYGERLALDFVAHLRGQIRFDGIEPLVAQIAQDVERTR 305

Query: 307 KILE 310
           + L+
Sbjct: 306 RALD 309


>gi|319941943|ref|ZP_08016264.1| hypothetical protein HMPREF9464_01483 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804596|gb|EFW01466.1| hypothetical protein HMPREF9464_01483 [Sutterella wadsworthensis
           3_1_45B]
          Length = 332

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 156/302 (51%), Gaps = 13/302 (4%)

Query: 1   MHVFHNIEIN-QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
           MHVF  +    Q +P+      VAIGNFDG+H GH  +L   +  A    +  +VL+F P
Sbjct: 16  MHVFRGLPSPLQRIPS-----AVAIGNFDGVHTGHQALLAGLVDAARERGLVPSVLTFEP 70

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR       P+  +S    + K L   G   +    F    A   AE F+  VLV  L+
Sbjct: 71  HPREFFPHLDPVPRISTLCDKVKRLLDCGIERIYMMPFNEHIAREGAEAFVTNVLVNGLD 130

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V  G  FRFG  RA     L++ G+++ F T +I  L  + +  VSS+ +R AL++G
Sbjct: 131 ARWVTVGEDFRFGSGRAAGAHDLERLGKEHHFET-WISPLLFHGTAKVSSTRLRAALSEG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLK---EGVYAIRFRTQ 233
               A  +LG+ +T+   VIHG+ +GRTLG+PT N+  + P    +    GV+A++    
Sbjct: 190 DFYEAEMMLGHPYTMSGRVIHGQALGRTLGYPTLNIAPIPPGSRARPALAGVFAVKVSGL 249

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                 GVA+ G  PT+      LLE+ +FD+  + YG+  TV F + +R E KF  +E+
Sbjct: 250 GPAEQCGVASLGLRPTVSSARRWLLETHVFDWKGDAYGRPVTVRFIERIRGEKKFSGLEE 309

Query: 294 LK 295
           L+
Sbjct: 310 LQ 311


>gi|91784972|ref|YP_560178.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia xenovorans LB400]
 gi|91688926|gb|ABE32126.1| FMN adenylyltransferase [Burkholderia xenovorans LB400]
          Length = 331

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNQTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDSARAALGRDYVISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVADEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|297623841|ref|YP_003705275.1| riboflavin biosynthesis protein RibF [Truepera radiovictrix DSM
           17093]
 gi|297165021|gb|ADI14732.1| riboflavin biosynthesis protein RibF [Truepera radiovictrix DSM
           17093]
          Length = 321

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 167/307 (54%), Gaps = 18/307 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSS 66
           ++  L   L+G V+ IGNFDG+HLGH L+L +  + A +  +P  VL+F P P  +    
Sbjct: 17  VSSPLALELRGVVLCIGNFDGVHLGHQLLLRRLQEAATSLRAPSVVLTFFP-PAKVFFQG 75

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  T    S +EK+  L +   +A++   F  + A    E F++++  + L  K +I G
Sbjct: 76  KPYLT----SAEEKLFLLRRFSPTAVVMTPFDHDYARTPKEAFLEQL--QHLAPKLLIVG 129

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG  R+G    LQ   E+     VF   LR  + + + SS+IR  L  G V  A  
Sbjct: 130 EDFHFGYKRSGGLDDLQHVTERL---EVF--SLRRLEEEPIKSSHIRELLRTGEVEQARR 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LGY +    +V  G++ GRT+GFPTAN+QL+P+  L  GV+A+   T   T + G+AN 
Sbjct: 185 FLGYSYLAIGEVTAGDRRGRTVGFPTANLQLAPEKALPIGVFAVWVETPYGT-FGGMANV 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  P+  P+ P  LE  +FDF  ++YG+   VSF  +LR + +F  ++ LK  +  DE++
Sbjct: 244 GPRPSY-PDAPPSLEVHLFDFDGDLYGKTIRVSFERFLRAQRRFAGLDDLKAQLAADEQR 302

Query: 305 ARKILES 311
           AR  L++
Sbjct: 303 ARAALQA 309


>gi|156973298|ref|YP_001444205.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           harveyi ATCC BAA-1116]
 gi|156524892|gb|ABU69978.1| hypothetical protein VIBHAR_00979 [Vibrio harveyi ATCC BAA-1116]
          Length = 311

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/296 (36%), Positives = 154/296 (52%), Gaps = 16/296 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQPMELFARDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+    L+   F    A+ +AE+FI+ +LV  L VK ++ G  F FGK R G+
Sbjct: 76  DKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGVKFLVIGDDFCFGKGRTGN 135

Query: 137 RGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ+ GEKYGF  V      + +LR      VSS+ IR AL +  +  A  +LG  ++
Sbjct: 136 FAMLQEAGEKYGFEVVSTQSFCLQQLR------VSSTAIRKALARDDLHFAQEMLGRDYS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V HG K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+ 
Sbjct: 190 IAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPVGGVANIGQRPTV- 248

Query: 252 PNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            NG    LE  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR
Sbjct: 249 -NGVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAAR 303


>gi|33862637|ref|NP_894197.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9313]
 gi|33634553|emb|CAE20539.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9313]
          Length = 310

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 9/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +A+G+FDG+H GH  ++E    + NN+P   TV+SF PHPR ++    P   L  PS +
Sbjct: 20  ALALGSFDGLHAGHRRVIE---AVVNNAPGVPTVVSFWPHPREVLYGE-PRLRLDLPSEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G   L+   F    A+ SAE F++++L+  L+ + +  G  FRFG++R GD  
Sbjct: 76  ACLLAPLGVEQLVLVPFDRALASLSAETFVKQMLIHTLKAERIAVGANFRFGRNREGDTT 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ+     G   + +  L + + ++ SSS IR+AL++G +  A  L+G  +     V+ 
Sbjct: 136 TLQQLAAAAGVEVMVLPILEDTEGRM-SSSRIRSALSEGDLQAATTLMGRPYRFRGRVVS 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPL 256
           G  +GR LG+PTAN+Q+     L   GVYA     +D++   + V N G  PT+ P  P 
Sbjct: 195 GRGLGRKLGWPTANLQVDGRKFLPGLGVYAAWASVKDESKPLAAVMNLGPQPTVDPTSPS 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E  + D   ++ G    V     LR + +F ++E+L   +G D   AR  L++
Sbjct: 255 AVEVHLLDQQMDLEGCEILVEPIQRLRGQQRFANLEELSTQIGRDADLARSKLKA 309


>gi|303232204|ref|ZP_07318907.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513310|gb|EFL55349.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 309

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 163/295 (55%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDG+H GH  ++  AI  A  +  +TVL +F+ HP TI++       +    I 
Sbjct: 18  VYALGTFDGVHRGHQRVIGNAIAEAKAHDAVTVLVTFSAHPMTILRPGDVPKRVLSADIM 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++ILE +    ++R    L+  N S ++F+  +  + ++V  +  GT F FG   AG+  
Sbjct: 78  DEILESLKVDYILRLPMNLDIFNMSPDKFLDALCGD-IDVVGIAIGTNFTFGAKGAGNPQ 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++++R    G H + ++ L + +   + S+NIR A+ +GH+  AA  LG  +     VI 
Sbjct: 137 LMRERLSAKGIH-IIVEPLLSTEEGPICSTNIRKAIEEGHMEQAATWLGRPYQFRGIVIK 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GRTLGFPT N  L  ++ +  +GVYA R    D   Y GV N G NPT   N    
Sbjct: 196 GDQRGRTLGFPTINFLLPNEMAIPPDGVYANRV-CIDGIWYDGVGNIGDNPTF-KNQYHR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            E  +FDF Q++YG+  TV F  Y+R E+KF ++++L   M  DE+ A +IL ++
Sbjct: 254 CEVHVFDFDQDVYGKEVTVQFISYIRGEVKFNNLQELIDQMKVDEETAIRILRNN 308


>gi|110597603|ref|ZP_01385888.1| riboflavin biosynthesis protein RibF [Chlorobium ferrooxidans DSM
           13031]
 gi|110340723|gb|EAT59200.1| riboflavin biosynthesis protein RibF [Chlorobium ferrooxidans DSM
           13031]
          Length = 321

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/293 (35%), Positives = 161/293 (54%), Gaps = 12/293 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS--SPIFTLSP 74
           G  V IG+FDG+H GH +I+ + + +A +  +   V++F PHPR +++ +   P+  L+ 
Sbjct: 26  GSAVTIGSFDGVHKGHRMIIARLVALARSRQLRSVVVTFEPHPRRVLKGAVTGPLGLLT- 84

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            +++EKI  L + G   L   +FT + A  S+E FI+ VLV  +  K++I G    FG+D
Sbjct: 85  -TLEEKINLLSREGVDLLFVVRFTPDFARRSSEDFIRNVLVNLIGAKSIIIGYDHAFGRD 143

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+G    L+  G +  F    +DEL        SS+ IR  L  G +  A   LG  + I
Sbjct: 144 RSGSGTTLEHLGGELDFDVEVLDELLIGDEHF-SSTRIRQLLASGLIAEANEFLGSPYMI 202

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V+ G+K GR +GFPT N+QLS PD LL + GVY  R    D  S+  + N G  PT+
Sbjct: 203 SGVVVDGDKRGREIGFPTVNLQLSDPDKLLPRSGVYLARTEL-DGRSFKVMMNIGLRPTV 261

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              G   +E++I  +S  +YG+    S F ++R E KF  +++LK  + +D+K
Sbjct: 262 SSEGITTVEAYILGYSGTLYGRTLKFSLFRFIREERKFTSLDELKNQLEKDKK 314


>gi|283797344|ref|ZP_06346497.1| riboflavin biosynthesis protein RibF [Clostridium sp. M62/1]
 gi|291075016|gb|EFE12380.1| riboflavin biosynthesis protein RibF [Clostridium sp. M62/1]
 gi|295115416|emb|CBL36263.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SM4/1]
          Length = 313

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDG+H GH  +LE+  +       T V +F   P T+I+        +     E
Sbjct: 17  AVTLGKFDGLHRGHKKLLEELFRFRGKGYRTAVFTFETAPGTLIRRKLQTMITTNEERCE 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L   G   L+ Y F  + A+ + E F++KVLVE +  K ++ GT F FG  R+GD   
Sbjct: 77  N-LRAAGVDYLVEYPFNDQVASMTPEDFVRKVLVEQMNAKAIVAGTDFHFGCRRSGDVEF 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    + G+  V +++  +   +I SS+ IR  L  G +  A  LLGY ++++  V+HG
Sbjct: 136 LRAHARELGYELVVVEKAMDGSREI-SSTYIREELAAGQIEKANELLGYTYSVQGRVVHG 194

Query: 200 EKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + +G  +GFPT N+ L P    L   GVY       D   Y G+ N GR PT+    P  
Sbjct: 195 KHLGTGMGFPTVNL-LPPSQKHLPAFGVYYSEV-VIDGKVYPGITNIGRKPTIKGEHPAG 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E++I+D+ ++IYG+   V    +LRPE KF+ +E+LK  +  D+++ R+  E 
Sbjct: 253 VETYIYDWKKDIYGKNIEVKLLSFLRPERKFESVEELKRQVLSDKEEGRRWHEE 306


>gi|123440979|ref|YP_001004968.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122087940|emb|CAL10728.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 312

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKREGQRLRLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L K G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD
Sbjct: 76  DKARYLAKAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V
Sbjct: 136 FQLLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALYDDDLVLAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGSKPLPGVANIGTRPT-VAGIRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 254 QLEVHLLDVTMDLYGRHIDVVLCAKLRNEQRFASLDALKQQIAHDVVTARTFFGLKTPV 312


>gi|313895694|ref|ZP_07829250.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320528962|ref|ZP_08030054.1| riboflavin biosynthesis protein RibF [Selenomonas artemidis F0399]
 gi|312975820|gb|EFR41279.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320138592|gb|EFW30482.1| riboflavin biosynthesis protein RibF [Selenomonas artemidis F0399]
          Length = 319

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 7/300 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDGIHLGH  I++ A++ A        V SF  HPR ++        +    ++
Sbjct: 18  VMALGMFDGIHLGHQRIVKTAVRRAREIGGTALVFSFLNHPRAVVDPQRSPRLIGSDVLR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KILE++G   L+   FT   A   A  F+  +L ++   + V+ G  + FG+   G   
Sbjct: 78  RKILERLGVDVLVEIPFTPNFAKTDAADFV-ALLHQYCAPQYVVIGENYTFGRFGRGTPD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++++  ++YGF  +  + +  +  + +SS+ IR  + +G +      LGY F+I   V+H
Sbjct: 137 LMRQEAKRYGFRALVCNPVIRD-GEPISSTRIRGLIQQGEIAKVNEYLGYPFSIIGTVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           GE  GR LGFPTAN++L  +   L  GVYA+         Y+GVAN G NPT        
Sbjct: 196 GEARGRLLGFPTANIELQDENESLPNGVYAVTV-AHGAEQYAGVANIGNNPTF-GGCRRR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           LE  IFD S+++YG R TVSF   +R E +F   E+LK  +  D+K +  ++   + L E
Sbjct: 254 LEVHIFDISKDLYGDRLTVSFHARIREERRFSSAEELKAQIERDKKTSISVIAEIFHLQE 313


>gi|254431093|ref|ZP_05044796.1| riboflavin biosynthesis protein RibF [Cyanobium sp. PCC 7001]
 gi|197625546|gb|EDY38105.1| riboflavin biosynthesis protein RibF [Cyanobium sp. PCC 7001]
          Length = 329

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 8/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPS 76
            +A+G+FDG+H GH  ++    +  +A+  P+  TV+SF PHPR ++    P   L  PS
Sbjct: 15  AIALGSFDGLHRGHRRVIAAVTEPAVADGVPLVPTVVSFWPHPREVLHGE-PRLRLDLPS 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE +G   L+   F  + A    E F+ +VLV  L+ + +  GT FRFG +R GD
Sbjct: 74  EKLELLEPLGVRQLVLVPFDRQLAALDPEAFVDRVLVNQLDSRRIAVGTNFRFGVNRQGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            G L       G     +  L + + ++ SSS IR AL  G +L A  LL   +     V
Sbjct: 134 TGTLVALAAARGIEVAVVPMLTDGEERL-SSSRIRRALAAGDLLEAERLLQRPYRFRGAV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNG 254
           + G  +GR LG+PTAN+Q+     L  EGVYA R +      +   V N G  PT+ P  
Sbjct: 193 VQGRGLGRQLGWPTANLQVDGRKFLPMEGVYAARAQVDAAGPWLPAVMNLGPQPTVDPLA 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P  +E  + D + E++G++  V     LR + +F  +E L   +  D  +AR
Sbjct: 253 PSAVEVHLLDRNLELHGRQLQVEPVALLRRQQRFDGVEALSAQIARDAARAR 304


>gi|124023637|ref|YP_001017944.1| riboflavin kinase/FAD synthase [Prochlorococcus marinus str. MIT
           9303]
 gi|123963923|gb|ABM78679.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9303]
          Length = 310

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +A+G+FDG+H GH  ++E    + NN+P   TV+SF PHPR ++    P   L  P+ +
Sbjct: 20  ALALGSFDGLHAGHRRVIE---AVVNNAPGVPTVVSFWPHPREVLYGE-PRLRLDLPTEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G   L+   F    A+ SAE F++++L+  L+ + +  G  FRFG++R GD  
Sbjct: 76  TCLLAPLGVEQLVLVPFDRALASLSAETFVKQMLIHTLKAQRIAVGANFRFGRNREGDTT 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQK     G   + +  L + + ++ SSS IR+AL++G +  A  L+G  +     V+ 
Sbjct: 136 TLQKLAAAAGVEVMVLPILEDTEGRM-SSSRIRSALSEGDLQAATTLMGRPYRFRGRVVS 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPL 256
           G  +GR LG+PTAN+Q+     L   GVYA     +D++   + V N G  PT+ P  P 
Sbjct: 195 GRGLGRKLGWPTANLQVDGRKFLPGLGVYAAWASVKDESEPLAAVMNLGPQPTVDPTSPS 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +E  + D   ++ G    V     LR + +F ++E+L   +G D   AR  L+
Sbjct: 255 AVEVHLLDQQMDLEGCELLVEPLQRLRGQQRFANLEELSTQIGRDADLARSKLK 308


>gi|49085302|gb|AAT51267.1| PA4561 [synthetic construct]
          Length = 313

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 153/289 (52%), Gaps = 19/289 (6%)

Query: 17  LKGGVVA-IGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           L GG VA IGNFDG+HLGH  IL    E+++++    P  V+ F P PR      S    
Sbjct: 13  LAGGCVATIGNFDGVHLGHQAILARLRERSLELG--VPSCVVIFEPQPREFFSPDSAPVR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + ++L   G   ++   F       SA +F+++VLV+ L V+ +  G  FRFG 
Sbjct: 71  LTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGC 130

Query: 132 DRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           DR+GD   L   G + GF      TV +D +R      VSS+ +R AL +G +  A  LL
Sbjct: 131 DRSGDFAFLVNAGREQGFTVEAATTVELDGVR------VSSTRVRQALAEGDLHLAERLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F++   V+HG+K+GR LG PTAN+QL        GVY +      Q    GVAN G 
Sbjct: 185 GRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRC-QGVANIGT 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P++  +G   LE+ + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 244 RPSVNGDGRPHLEAHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|209517452|ref|ZP_03266293.1| riboflavin biosynthesis protein RibF [Burkholderia sp. H160]
 gi|209502106|gb|EEA02121.1| riboflavin biosynthesis protein RibF [Burkholderia sp. H160]
          Length = 352

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 22  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAAKARGLPVCVMTFEPHPREF 81

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 82  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDTFVERIIVNGLH 136

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  FR+G  RAGD   LQ  G++YGF    +  + +     +SSS +R AL  G
Sbjct: 137 ARWIMIGDDFRYGAKRAGDFASLQAAGKQYGFEVEQMATVADPSGARISSSGVRAALVAG 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG  + I   V HG K+GR LGFPT N+ ++       G++ ++     +  
Sbjct: 197 DLDAARAALGRDYLISGHVTHGMKLGRDLGFPTLNLPITHKRPALAGIFVVQVHGIAEQP 256

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 257 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLEMLTAA 316

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 317 IARDVANAR 325


>gi|289550936|ref|YP_003471840.1| Riboflavin kinase/FMN adenylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658438|ref|ZP_07911310.1| riboflavin biosynthesis protein RibF [Staphylococcus lugdunensis
           M23590]
 gi|289180468|gb|ADC87713.1| Riboflavin kinase/FMN adenylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496767|gb|EFU85090.1| riboflavin biosynthesis protein RibF [Staphylococcus lugdunensis
           M23590]
          Length = 323

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 169/299 (56%), Gaps = 12/299 (4%)

Query: 22  VAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFT-LSPPSIQ 78
           +A G FDG+H GH  + E       A+N    V++F+PHP  ++       T L+P + +
Sbjct: 22  MAFGFFDGMHKGHLKVFETLNERAEAHNLKKAVMTFDPHPSVVLNPKRKRTTYLTPLTDK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++E+      I   F+   A+ +AE F+Q  ++    VK V+ G  F +GK   G+  
Sbjct: 82  LEMIEQQNIDYCIVINFSSRFADVTAEDFVQNYIINN-HVKEVVAGFDFTYGKFGKGNMT 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++  +   F+T  + + +  +++ +S++ IR AL +GH+  A + LGY + ++  V+ 
Sbjct: 141 VLKEMDD---FNTTIVGK-QEIEAEKISTTAIRQALQEGHLQKANNELGYLYRLKGTVVQ 196

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTM--VPNG 254
           GEK GRT+GFPTAN+Q S D +L K+GVYA+      ++  Y GVAN G  PT       
Sbjct: 197 GEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMAIGAEKRLYRGVANVGVKPTFHDPSKA 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ L   M ED+ KA+ +L   +
Sbjct: 257 EIVIEVNIFDFDENIYGERVIVYWHHYLRPEVKFDGIDPLVEQMNEDKAKAQYLLAVDF 315


>gi|317152589|ref|YP_004120637.1| riboflavin biosynthesis protein RibF [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942840|gb|ADU61891.1| riboflavin biosynthesis protein RibF [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 332

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 15/322 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  NIE    +   + G  V IGNFDG+H GH  ++E A   A    +   V++F+PH
Sbjct: 1   MIIVKNIE---DIRGAIAGSCVTIGNFDGVHKGHQKLIELATSRAKAQGLVSVVVTFDPH 57

Query: 59  PRTII--QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  ++   ++ P  TL+   ++  ++ + G    +  +FTLE A  S E+F++K LV+ +
Sbjct: 58  PLQVLGKAAAPPFITLTEQKLE--LISQHGPQVCLLLEFTLEMARLSPEEFVRKYLVDGV 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            ++ +I G  +  GK R+G+   L + G   GF    +D +  + + +VSS+ IR  +  
Sbjct: 116 HMQEMIIGYDYHLGKGRSGNFETLSELGAACGFAVDRLDPVTIDGA-VVSSTRIRDLVQS 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLG  + ++  V+HG  + GR LGFPTAN++L  ++    GVYAI      +
Sbjct: 175 GRVWAARPLLGRFYQVKGRVVHGMNRGGRLLGFPTANLKLVDELFPMPGVYAIWVEVPGE 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G NPT   N  L +E+ I D+S ++YG    V F   +R E KF  +++L+
Sbjct: 235 VRM-GVANIGINPTF-GNDALSVEAHILDYSGDLYGADIRVHFVQRIRDERKFSGLDELR 292

Query: 296 IYMGEDEKKARKILESSYPLSE 317
             + +D +  R+IL  S P +E
Sbjct: 293 ARITKDVELGRQIL--SQPEAE 312


>gi|314936567|ref|ZP_07843914.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655186|gb|EFS18931.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis subsp.
           hominis C80]
          Length = 323

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 175/318 (55%), Gaps = 17/318 (5%)

Query: 7   IEINQSLPNH--LKGGV-VAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR 60
           IEI   + N   +K  V +A G FDG+H GH  + E A+ I     N    V +F+PHP 
Sbjct: 4   IEITHPIQNEQLIKEDVAMAFGFFDGMHRGHSKVFE-ALDIRAKEKNLKKAVTTFDPHPS 62

Query: 61  TIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++         L+P S + +++E       I   F+   AN +AE+FI+  ++    VK
Sbjct: 63  VVLNPERKRTDYLTPLSDKLEMIEHHDIDYCIVINFSSRFANVTAEEFIKDYIINN-HVK 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FGK   G+  +L +  E   F+T  + +L +  S+ +S+++IR AL +G++
Sbjct: 122 EVVAGFDFTFGKFGKGNMAVLNEIDE---FNTTIVGKL-DLDSEKISTTSIRQALHEGNL 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT-QDQTS 237
             A   LGY + I+  V+ GEK GRT+GFPTAN+Q S D +L K+GVYA+      +   
Sbjct: 178 QKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEHKI 237

Query: 238 YSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           Y GVAN G  PT        +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ L 
Sbjct: 238 YRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDALV 297

Query: 296 IYMGEDEKKARKILESSY 313
             M +D+++A+ +L   +
Sbjct: 298 SQMNDDKERAKYLLAVDF 315


>gi|294507802|ref|YP_003571860.1| Riboflavin biosynthesis protein [Salinibacter ruber M8]
 gi|294344130|emb|CBH24908.1| Riboflavin biosynthesis protein [Salinibacter ruber M8]
          Length = 311

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 14/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
           VV +G FDG+H GH  I+E  Q    A N P T++SF+PHPR ++     P+ T    ++
Sbjct: 17  VVTVGTFDGVHRGHQAIIEYLQDRAEAQNGPSTLVSFDPHPRAVVHDEVVPLLT----TV 72

Query: 78  QEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            E+  +LE++G    +   F+ + A  S   ++++VLV+ + V+ +  G   RFGKDRAG
Sbjct: 73  AERADLLERLGLDRFVVVPFSDDFAQLSPTAYVEEVLVDRIGVQEITVGYDHRFGKDRAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT-KGHVLNAAHLLGYRFTIES 194
           D   L++ G +YGF +V +   +     +VSS  IR+ L  +G V  A   LG  + ++ 
Sbjct: 133 DVEALREFGGEYGF-SVDVIPPQEVDHDVVSSRTIRSLLVEEGRVEQATDRLGRPYQLQG 191

Query: 195 DVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V  G+  GR LG+PTAN+ L  +  ++ K+GVYA      +     G+ N G  PT   
Sbjct: 192 VVSRGQGRGRKLGYPTANLALGDARKLVPKQGVYATAVTLPNGDRRGGMMNIGSRPTF-D 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              + +E  + D+  ++YG   +V F   LR E KF+  E L   + EDE++ R ++ +
Sbjct: 251 EMDVTVEVHLLDYEGDLYGASLSVEFLQRLRAEQKFESAEALAAQLSEDEERCRTVIRT 309


>gi|320352888|ref|YP_004194227.1| FMN adenylyltransferase [Desulfobulbus propionicus DSM 2032]
 gi|320121390|gb|ADW16936.1| FMN adenylyltransferase; riboflavin kinase [Desulfobulbus
           propionicus DSM 2032]
          Length = 323

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 160/292 (54%), Gaps = 8/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+HLGH  + +Q +  A     T   ++F+PHP  ++ S   I  +S    + 
Sbjct: 19  VTIGNFDGVHLGHQKLFDQVVARARQDKGTSVAITFDPHPLKVL-SPQGIRLISTTPQKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E+ G   L+   F  E A  +A +F+ +VL+  + ++ ++ G  +  GK R GD   
Sbjct: 78  ELIERAGIDVLVIIPFNREVAVTTAVEFVDQVLLGRVGMRDLVVGYDYAMGKGRQGDTAF 137

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ++G++ GF +V +      +  +VSSS IR  +  G + +   LLG  + I  DV  G
Sbjct: 138 LQRQGQEKGF-SVMVMPAHYEQGMLVSSSRIRELVAAGKMRDVRRLLGRWYQIRGDVQWG 196

Query: 200 -EKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            ++ G+ LGFPTAN+ LS  D+  K GVY  +    D   Y GV+N G NPT    G L+
Sbjct: 197 RQRGGKLLGFPTANLNLSEEDLCPKRGVYVTQV-IYDGRQYGGVSNIGYNPTFGDTG-LV 254

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            E+ IFDF+ +IYG+   ++   +LR EI F   + L   +  D + A+K+L
Sbjct: 255 AETHIFDFNADIYGRPLKINLLRHLRGEIAFSGPDALARQIHRDIEVAQKVL 306


>gi|283770336|ref|ZP_06343228.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus H19]
 gi|283460483|gb|EFC07573.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus H19]
          Length = 323

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           +K VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 LKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|302387313|ref|YP_003823135.1| riboflavin biosynthesis protein RibF [Clostridium saccharolyticum
           WM1]
 gi|302197941|gb|ADL05512.1| riboflavin biosynthesis protein RibF [Clostridium saccharolyticum
           WM1]
          Length = 317

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 163/298 (54%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  +V +G FDG H GH  +L++   IK        VL+F+  P  +++   P  T++  
Sbjct: 14  KPAIVTLGKFDGRHRGHQKLLKKMREIKDEKGYQTAVLTFDMSPNALMKGG-PQKTITTN 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++  LEK+G   LI Y FT ETA+   E+F+++VL   +  + ++ GT   FG   AG
Sbjct: 73  LERKNNLEKIGIDYLIEYPFTEETAHMEPEEFVRQVLAGQMNARVIVVGTDCSFGYQGAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L +   +YG+  + I + +++   I SS+ IR  L  G++  A  LLG  + I   
Sbjct: 133 NADSLSRWKNRYGYELIVIPKEQDDHRDI-SSTYIREQLDAGNMEKANELLGEPYAIHGT 191

Query: 196 VIHGEKIGRT-LGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG  IG T LGFPTAN+   P+  L   GVY  +    D T Y G+ N GR PT+   
Sbjct: 192 VVHGNHIGGTILGFPTANILPPPEKHLPVFGVYVSKVYV-DGTYYGGITNIGRKPTVEGI 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            P+  E++I+  +++IYG+   V    ++RPE KF+ +E+LK  +G+D +   + L++
Sbjct: 251 SPVGAETYIYGINEDIYGKTIEVQLLHFVRPERKFEGLEQLKAQIGKDREYGMRYLKA 308


>gi|298694564|gb|ADI97786.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus ED133]
          Length = 323

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 174/322 (54%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++  +
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-K 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R  V++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVNVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|167626614|ref|YP_001677114.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596615|gb|ABZ86613.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 306

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 165/298 (55%), Gaps = 16/298 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            VAIG+FDG+HLGH  I+++ I IA  NN    ++ F P P+           ++P  I 
Sbjct: 17  AVAIGSFDGVHLGHQAIIQKLIHIAKENNLVPYIMFFEPLPKEFFLKE-----IAPTRIY 71

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + KI  L K+G   +I +KF    AN  A++FI++ LV  L  K +I G  F+FGK+R
Sbjct: 72  DFRNKIINLNKLGIEHIICHKFNQRFANIEAKEFIEEFLVRKLNTKHIIVGDDFKFGKNR 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           AG+  +L++    + F    I  L N  +  +SSS IR A+ +  +  A  L+G    I 
Sbjct: 132 AGNYSLLEQYSLTHDFTVDRISTL-NLDNHRISSSQIRQAIAEHDIQQANKLIGSSLKIN 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           S V+HG+K GR +GF T N +L  +  LK GVY  +    D+  + GV N G  PT +  
Sbjct: 191 SRVLHGQKNGRKIGFHTVNQKLLKNSALK-GVYLSKVYIDDEV-FFGVTNAGTRPT-IDG 247

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              LLE+ IF+F++ IYG+  T    D++RPE KF   ++LK  + +D + A+K++ +
Sbjct: 248 KSNLLETHIFNFNKFIYGKHITTEIIDFIRPEKKFNSFDELKEQISKDIETAKKLITT 305


>gi|332160244|ref|YP_004296821.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664474|gb|ADZ41118.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863047|emb|CBX73179.1| riboflavin biosynthesis protein ribF [Yersinia enterocolitica
           W22703]
          Length = 312

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L   G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD
Sbjct: 76  DKARYLANAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G ++GF  +  D   ++  +I SS+ IR AL    ++ A  LLG+ ++I   V
Sbjct: 136 FQLLQQAGAEFGFDVISTDSFCDSGLRI-SSTAIRQALYDDDLVLAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+        S  GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPKSLPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + E+YG    V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 254 QLEVHLLDVTMELYGCHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 312


>gi|313906207|ref|ZP_07839553.1| riboflavin biosynthesis protein RibF [Eubacterium cellulosolvens 6]
 gi|313468937|gb|EFR64293.1| riboflavin biosynthesis protein RibF [Eubacterium cellulosolvens 6]
          Length = 309

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 159/288 (55%), Gaps = 7/288 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDG+H GH  ++ +A  +A  +     V +F   P+ ++     +  ++    +
Sbjct: 17  VITLGKFDGVHKGHRKLIRKARALAAKAGGRSAVFTFTVSPQ-VMMGERQMKMITTNRER 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++IL ++G   L+   FT E  + SAE F++++LV  L    V+ GT  RFGKDRAGD  
Sbjct: 76  DEILRELGIDLLVECPFTEELRSMSAEDFVKELLVGRLHASAVVVGTDARFGKDRAGDAD 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L   G KYGF  VF++E   +  + +SSS +R  + +G +    +LL Y + +  +V+H
Sbjct: 136 LLVSLGAKYGFD-VFVEEKEKDGDREISSSYVRERIAEGDMQRVQNLLSYPYFMAGEVVH 194

Query: 199 GEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G  +G TLGFPT N +  S  +L   GVY  R     +  Y G++N G  PT V    + 
Sbjct: 195 GRHLGHTLGFPTINTVPPSEKMLPPRGVYFTRTLVGGKW-YQGISNLGVKPT-VDGSAVG 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           LE+++FD S ++YGQ   V F  + R E KF  IE+LK  M ED + A
Sbjct: 253 LETYLFDCSLDLYGQEARVEFLQFRRSEKKFGSIEELKNQMDEDIQAA 300


>gi|325982870|ref|YP_004295272.1| riboflavin biosynthesis protein RibF [Nitrosomonas sp. AL212]
 gi|325532389|gb|ADZ27110.1| riboflavin biosynthesis protein RibF [Nitrosomonas sp. AL212]
          Length = 322

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 161/307 (52%), Gaps = 26/307 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+HLGH  +L +    A+    P   ++F PHPR           L+   ++
Sbjct: 16  ALTIGNFDGVHLGHQAMLARLKNAASQLGLPACAMTFEPHPREFFTPHQAPVRLT--GLR 73

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L + G   ++  +F  + A  S E+FI  +L + L V+ ++ G  FRFG  RAGD
Sbjct: 74  EKMNGLIRTGIDCIVICRFNSDFARLSPERFITHILNQELHVRWLLVGDDFRFGTRRAGD 133

Query: 137 RGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              L     +  F      +V +D      +Q VSSS IR AL  G++  A  LLG  + 
Sbjct: 134 SATLLALSAENDFTVEVMPSVLVD------NQRVSSSAIRQALAAGNLDEAGKLLGRPYN 187

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTS----YSGVANFG 245
           I   VI G+K+GR +GFPTAN+QL  SP +    G++ +     + +S     +GVA+ G
Sbjct: 188 ISGRVIDGDKLGRQIGFPTANIQLKHSPPL---NGIFVVSVYGANPSSPEIPLAGVASLG 244

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+  NG  +LE  +FDF+ +IYGQR  V F   LR E K+ DI  L   + +D  +A
Sbjct: 245 VRPTIHDNGKPVLEVHLFDFNDDIYGQRLRVDFLHKLRNEEKYADISTLVRQIEKDVAQA 304

Query: 306 RKILESS 312
           ++   ++
Sbjct: 305 KEFFMTA 311


>gi|251797393|ref|YP_003012124.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. JDR-2]
 gi|247545019|gb|ACT02038.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. JDR-2]
          Length = 315

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 165/296 (55%), Gaps = 17/296 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
            VAIG+FDG+H GH  ++ QA++IA  +     V++F PHP+ ++      F+ L+PP  
Sbjct: 23  AVAIGHFDGVHRGHRNVITQAVQIAKETGALSAVMTFLPHPKEVLGQGDQYFSCLTPPEE 82

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ +  ++G   ++  KF L  A  S +QF+++VL   L  + VI G  F FG    G+ 
Sbjct: 83  KQALFAELGVDIMLVVKFDLTFAAISPQQFVEEVL-RPLHAEHVIVGFDFTFGAKGKGNP 141

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +++         TV I E      + VSS+ IR AL KG +  A  LLG  + ++  V+
Sbjct: 142 EMMRTLSSPD--ITVDIVEPLYENGEKVSSTYIRAALEKGDIALATTLLGRPYEVDGIVV 199

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT-----MV 251
           HG+  GRT+GFPTAN+ LS P +    GV+AI+     +T Y GV N G  PT     + 
Sbjct: 200 HGDARGRTIGFPTANVGLSKPYVTPCLGVFAIKAMVAGKT-YYGVLNHGMKPTFNKEEIR 258

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P    +LE+ +FDF QEIYG+  T+ F  ++R E +F  + +L   +GED K+ ++
Sbjct: 259 P----VLEAHLFDFHQEIYGEPITLEFHSFIRAEKRFGSVHELIEQIGEDAKQTKQ 310


>gi|300703296|ref|YP_003744898.1| riboflavin kinase/ fmn adenylyltransferase [Ralstonia solanacearum
           CFBP2957]
 gi|299070959|emb|CBJ42267.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum CFBP2957]
          Length = 332

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 160/312 (51%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  +  +F++ VLV+ L  + ++
Sbjct: 61  FMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPAEFVRNVLVDGLHTRWLL 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  +  +  +I SSS +R AL  G + +A
Sbjct: 121 VGDDFRFGAKRAGDFTHLQAAGAQFGFEVEQMGSVSESGIRI-SSSAVREALAAGDLEHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     VA
Sbjct: 180 RRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  IFD+    YG+   V F   LR E +F  ++ LK  +  D 
Sbjct: 240 SIGVRPTVDDSGRVLLEVHIFDYHANAYGKLVRVEFMKKLRDEARFDSLDALKDAIARDC 299

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 300 VDARHFFGLALP 311


>gi|189424708|ref|YP_001951885.1| riboflavin biosynthesis protein RibF [Geobacter lovleyi SZ]
 gi|189420967|gb|ACD95365.1| riboflavin biosynthesis protein RibF [Geobacter lovleyi SZ]
          Length = 315

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 158/300 (52%), Gaps = 6/300 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  I  Q  + A     T  V++F+PHP  ++Q  +  F L     Q
Sbjct: 18  VVTIGNFDGVHRGHREIFRQVTERARALSATSVVVTFSPHPLRVLQPDNRRFCLITTDEQ 77

Query: 79  EK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ ++ +     L+   FT E A  SA+ F++ VL   L V+ ++ G  + FG+ R G+ 
Sbjct: 78  KRELIAENDIDLLLVIPFTREFAAVSADDFVRSVLHACLGVRFLVIGHDYAFGRGREGNE 137

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L + G++  F    ++ +  +   + SSS +R  +  G V++A  +LG    +   V+
Sbjct: 138 QFLVQMGQRLDFDVKVLEPV-GDGGVLFSSSVVRRLVADGAVVDALQILGRCHRVCGQVV 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG +IGR+LGFPTAN+    +++  +GVYA+      +    G  + G NPT    G   
Sbjct: 197 HGREIGRSLGFPTANIVTHNELIPGDGVYAVWVSVLGEL-LMGACSIGVNPTF-EGGQHT 254

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E F+FDF+ ++YGQ   V F + LR   +F D+  LK  +  D   AR IL +  P+ +
Sbjct: 255 IEVFLFDFNDDLYGQDVVVHFVEKLRDVTRFADVAALKSQIAADVVSARAILAAGLPVEQ 314


>gi|170693572|ref|ZP_02884730.1| riboflavin biosynthesis protein RibF [Burkholderia graminis C4D1M]
 gi|170141354|gb|EDT09524.1| riboflavin biosynthesis protein RibF [Burkholderia graminis C4D1M]
          Length = 331

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 153/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G+ YGF    +  + +     +SSS +R AL  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFTSLKAAGQHYGFEVEQMATVADPSGARISSSGVRAALVAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVTDEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IARDVANAR 304


>gi|294848268|ref|ZP_06789015.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9754]
 gi|294825068|gb|EFG41490.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9754]
          Length = 323

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+  + +    V   E+ N K   +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEY-DAFNKTIVSKQEIENEK---ISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT 236
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 237 S-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT   PN   +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|229829168|ref|ZP_04455237.1| hypothetical protein GCWU000342_01253 [Shuttleworthia satelles DSM
           14600]
 gi|229792331|gb|EEP28445.1| hypothetical protein GCWU000342_01253 [Shuttleworthia satelles DSM
           14600]
          Length = 311

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 161/304 (52%), Gaps = 8/304 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPP 75
           ++   V +G FDG+H GH L++++  +      ++V L+F   PR  +      F +   
Sbjct: 13  MEDSAVCVGKFDGLHRGHRLLIDKTREEETRGLVSVALTFKTSPRRFLDQDR--FNIVDN 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  + E+ G S L++++F  + A    E F+++ LV  L ++T++ G  F FG   AG
Sbjct: 71  RERGMLFERTGISCLLQWEFNEKVARMEPEAFLRQ-LVHDLSMRTLVVGEDFHFGYRGAG 129

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++   + GF  + I +L+     I SSS IR  +T G +  A  LLGY F    +
Sbjct: 130 DVETLKQLASELGFRPLIIPKLKEGGEDI-SSSRIRRLITGGQIEEANALLGYDFFCYGE 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++HG KIGRT+G PT N+    D LL + GVY  R       SY G+ N G  PT+    
Sbjct: 189 IVHGRKIGRTIGIPTINLSPPEDKLLPRYGVYVTRV-VMGTKSYWGMTNVGVKPTIEGRR 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED-EKKARKILESSY 313
              +E+++ DF  +IYG+   + F  ++R E KF+DI+ LK+ +G D E+ AR +     
Sbjct: 248 APGIETYLMDFEGDIYGREARIDFLHFVRDEKKFEDIKALKLQIGRDKEQIARYVSRHPE 307

Query: 314 PLSE 317
            LSE
Sbjct: 308 SLSE 311


>gi|118602076|ref|YP_903291.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567015|gb|ABL01820.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 300

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 157/298 (52%), Gaps = 12/298 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           Q+L +H  G VV IGNFDG+H+GH  I++  +K A   N P  ++SF+P P+        
Sbjct: 8   QNLKSHF-GSVVTIGNFDGVHIGHQKIIKTLVKKAQIMNLPSVLISFSPTPQHFFGHMQA 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             TLS    +  +L  +G    +   F    +  SA+ FIQ++L++ L +K  I G  FR
Sbjct: 67  --TLSSFKQKHALLTNLGLEEYLLINFNTPFSQLSADAFIQQILLKKLNIKHCIVGDDFR 124

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R GD  +LQ     + F       + +N  + VSSS IR +L KG    A  LLG 
Sbjct: 125 FGANRTGDFSLLQT----FDFEVEKTPTVLHNFHR-VSSSKIRQSLKKGDFNLANQLLGR 179

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F+I   +IHG+K GR + FPT N+ +   I    GV+A+      +  Y+GV N G+ P
Sbjct: 180 EFSISGKIIHGQKQGRAIDFPTINILIKRKISPLLGVFAVNVELNGKI-YNGVCNLGKRP 238

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T +    +LLE+F+FDF+ +IYG+     F   +R E KF     LK  +  D K A+
Sbjct: 239 T-IGGEIILLEAFLFDFNSQIYGENAKTVFKYKIRDEQKFDSFSALKRQIKSDVKDAK 295


>gi|295090494|emb|CBK76601.1| riboflavin kinase/FMN adenylyltransferase [Clostridium cf.
           saccharolyticum K10]
          Length = 313

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDG+H GH  +LE+  +       T V +F   P T+I+        +     E
Sbjct: 17  AVTLGKFDGLHRGHKKLLEELFRFRGKGYRTAVFTFETAPGTLIRRKLQTMITTNEERCE 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L   G   L+ Y F  + A+ + E F+++VLVE +  K ++ GT F FG  R+GD   
Sbjct: 77  N-LRAAGVDYLVEYPFNDQVASMTPEDFVRRVLVEQMNAKAIVAGTDFHFGCRRSGDVEF 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    + G+  V +++  +   +I SS+ IR  L  G +  A  LLGY ++++  V+HG
Sbjct: 136 LRAHARELGYELVVVEKAMDGSREI-SSTYIREELAAGQIEKANELLGYTYSVQGRVVHG 194

Query: 200 EKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + +G  +GFPT N+ L P    L   GVY       D   Y G+ N GR PT+    P  
Sbjct: 195 KHLGTGMGFPTVNL-LPPSQKHLPAFGVYYSEV-VIDGKVYPGITNIGRKPTIKGEHPAG 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E++I+D+ ++IYG+   V    +LRPE KF+ +E+LK  +  D+++ R+  E 
Sbjct: 253 VETYIYDWKKDIYGKNIEVKLLSFLRPERKFESVEELKRQVLSDKEEGRRWHEE 306


>gi|124003204|ref|ZP_01688054.1| riboflavin biosynthesis protein RibF [Microscilla marina ATCC
           23134]
 gi|123991302|gb|EAY30733.1| riboflavin biosynthesis protein RibF [Microscilla marina ATCC
           23134]
          Length = 310

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 165/295 (55%), Gaps = 11/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           +V  G FDG+H+GH  IL +  +I++ S     +++F PHPR ++   ++ +  LS  + 
Sbjct: 17  IVTSGTFDGVHVGHQKILARIREISSKSKGETVLITFWPHPRIVLSDGNTDLKLLSTINE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++LEK G   L+   FT E +  S + FI++V V+ +  + ++ G   RFGK+R G  
Sbjct: 77  KARLLEKHGIDHLVVLPFTKEFSQLSPDAFIKQVYVQGVGTQKLVIGYDHRFGKNREGGF 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L++    YGF    I+E+  +     ++SS+ IR AL +G++  A   LGY ++IE  
Sbjct: 137 DYLKEHASSYGFE---IEEISRHDIDDVVISSTKIRNALLEGNIEIANQYLGYAYSIEGK 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG+KIGRT+GFPTAN+ +     L   +G+YA+     D+    G+   G  PT+   
Sbjct: 194 VMHGDKIGRTMGFPTANLNIPETFKLIPADGIYAVEAILGDE-QLRGMLYIGNRPTLSGA 252

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
               +E  +FDF ++IY +   +     +R + K   +E LK+ + +DE+K+R I
Sbjct: 253 TQRRIEVNLFDFDRDIYEESLNLCLVAKIRGDEKLDSLEALKLKLKDDERKSRAI 307


>gi|271502099|ref|YP_003335125.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech586]
 gi|270345654|gb|ACZ78419.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech586]
          Length = 313

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 3/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQPLELFAAEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+   F    A   A  FI  +LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKVKYLAQAGVDYLLCVTFDAHFAANHASTFISSLLVEKLGVKFLVVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +  F  +      ++  + VSS+ +R AL + ++  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGVEQNFDVISTQTFCSSGKR-VSSTAVREALAQDNLTLAQELLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GRT+GFPTAN+ L   +    GVYA++     +    GVAN G  PT+  +   
Sbjct: 195 VHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGEAPLPGVANIGTRPTVTGDKRQ 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   AR+      P+
Sbjct: 255 QLEVHLLDVTLDLYGRHIDVVMCKKLRSEQRFASLDALKQQIADDVVAAREFFGLKAPV 313


>gi|323441052|gb|EGA98759.1| riboflavin biosynthesis protein [Staphylococcus aureus O11]
 gi|323443921|gb|EGB01532.1| bifuncational riboflavin kinase/FAD synthase [Staphylococcus aureus
           O46]
          Length = 323

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 173/322 (53%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   +IA    +   V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +LQ   E   F+T  +   E+ N K   +S+++IR  L 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIVSKQEIENEK---ISTTSIRQDLI 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q S D LL ++GVYA+      
Sbjct: 174 NGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGT 233

Query: 235 QTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GVAN G  PT   PN   +++E  IFDF   IYG+R  V++  +LRPEIKF  I
Sbjct: 234 ENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVNVNWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVKQMNDDKSRAKYLLAVDF 315


>gi|291616221|ref|YP_003518963.1| RibF [Pantoea ananatis LMG 20103]
 gi|291151251|gb|ADD75835.1| RibF [Pantoea ananatis LMG 20103]
          Length = 308

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 153/291 (52%), Gaps = 4/291 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  ++ + ++     N P+ V+ F P P  +    S    L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALMGRLLEEGRKRNLPVMVMVFEPQPLELFAGESAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L ++G  +++  +F    A  SA+ FI ++LV  L V  +  G  FRFG  R GD
Sbjct: 76  EKLKYLAEIGVDSVLCVRFDHRFAALSAQSFISELLVNKLGVNYLAVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF  V  +   +   +I SS+ +R AL + ++  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGAQYGFDVVSTETFCDGGKRI-SSTAVRQALAEDNLALAQSLLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRTLGFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDALGRTLGFPTANLPLRRCVSPVKGVYAVEVHGLGPQPLPGVANIGTRPT-VKGLRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  + D + ++YG+   V     +R E +F  ++ LK  + +D   AR+
Sbjct: 254 QLEVHLLDINMDLYGRHIDVVLKQKIRNEQRFASLDALKEQIAKDTVTARQ 304


>gi|238926816|ref|ZP_04658576.1| possible FAD synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885348|gb|EEQ48986.1| possible FAD synthetase [Selenomonas flueggei ATCC 43531]
          Length = 323

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 7/304 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VVA+G FDG+H+GH  I+  A + AN  +    V SF  HPR I+ S      +S  
Sbjct: 19  KNIVVALGMFDGLHIGHQKIIRTAAEQANRIHGTTFVFSFTNHPRAIVDSLGAPRRISSE 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  +IL  +G   L+   FT   A+ S E+FI  +L  +   + V+ G  + FG+   G
Sbjct: 79  QVSRRILRNLGVDVLVEIPFTPAFADTSPEEFIH-LLYRYFSPQYVVVGENYTFGRKGVG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L+  G +Y   T+    +  +   I SS+ IRT + +G + +   LLGY FT+   
Sbjct: 138 TPQLLRGIGRRYTIETIVCASVLYDNVPI-SSTRIRTYIEQGDITHVNELLGYPFTMIGT 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+  GR LGFPTAN+ L     +L  GVYA+     +   YS VAN G NPT   + 
Sbjct: 197 VIHGQARGRLLGFPTANIALFEFYEILPNGVYAVTVLYHNHI-YSAVANIGNNPTF-GSC 254

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
              +E  I DF  ++YG++  VSF   +R E +F  +++L   +  D++ A + L+ ++ 
Sbjct: 255 DRRMEVHIMDFDGDLYGKKILVSFHKRIRSERRFDSVDELISQIKSDKECAERALQETFH 314

Query: 315 LSER 318
           L E+
Sbjct: 315 LQEK 318


>gi|152976175|ref|YP_001375692.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152024927|gb|ABS22697.1| riboflavin biosynthesis protein RibF [Bacillus cytotoxicus NVH
           391-98]
          Length = 323

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 176/318 (55%), Gaps = 16/318 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           +H+ H  ++N+     L   V+A+G FDGIHLGH  +++ A KIA+       V++F+PH
Sbjct: 4   IHLTHRHDLNKL---ELPPTVMALGYFDGIHLGHQRVIQTAKKIADEKGWKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++PPS++EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 61  PSVVLGKKEAHVAYITPPSLKEKVIADLGIDLLYVVKFDEAFAGLLPQQFVDEYVIG-LN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           VK V+ G  + +G+   G    L    RGE   F    I+++   + + VSS+ +R  + 
Sbjct: 120 VKHVVAGFDYSYGRLGKGTMETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIR 175

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQD 234
            G +     +LG  +T+E  V+HG+K GR +GFPTAN+ L+ D LL   GVYA+R +  D
Sbjct: 176 NGEMEQIPSILGRLYTVEGKVVHGDKRGRQIGFPTANVALNGDYLLPPVGVYAVRLKVHD 235

Query: 235 QTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +  + GV N G  PT   N   L +E  +F F+++IY Q  TV +   +R E KF  I++
Sbjct: 236 KW-HDGVCNIGYKPTFKENERQLSIEVHVFQFNEDIYDQTVTVEWHMRIREEKKFNGIDE 294

Query: 294 LKIYMGEDEKKARKILES 311
           L   + ED+  A++  ++
Sbjct: 295 LVAQIAEDKNTAQEYFKT 312


>gi|56412318|ref|YP_149393.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361255|ref|YP_002140890.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198244244|ref|YP_002213999.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|56126575|gb|AAV76081.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197092730|emb|CAR58153.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197938760|gb|ACH76093.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 312

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P+ +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPQELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQKAGVEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 304


>gi|320089077|emb|CBY98833.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 312

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLALRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 304


>gi|300715261|ref|YP_003740064.1| riboflavin biosynthesis protein [Erwinia billingiae Eb661]
 gi|299061097|emb|CAX58204.1| Riboflavin biosynthesis protein [Erwinia billingiae Eb661]
          Length = 312

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 155/300 (51%), Gaps = 4/300 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L +  +     N P+ V+ F P P  +  +      L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLARLCEEGRQRNLPVVVMIFEPQPLELFAADKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G  A++  +F    A  +AE F+  +LV+ L+VK +  G  FRFG  R G
Sbjct: 75  RDKVRYLSEAGVDAVLCVRFDRRFAALTAESFVTDLLVDKLDVKFLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ  G ++GF  +      ++  +I SS+ +R AL + ++  AA LLG+ F+I   
Sbjct: 135 DFLLLQHAGIEHGFDVISTQTFCDDGKRI-SSTAVRQALAEDNLPLAAALLGHPFSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRTLGFPTAN+ L   +   +GVYA+           GVAN G  PT V    
Sbjct: 194 VVHGDALGRTLGFPTANLPLRRYVSPVKGVYAVEVLGLGDKPLPGVANIGTRPT-VAGMR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             LE  + D +  +YG+   V     +R E +F  +++LK  + +D   AR       P+
Sbjct: 253 QQLEVHLLDVAMHLYGRHIDVVLCQKIRNEQRFASLDELKEQIAKDVVSARTFFGLKTPV 312


>gi|300806902|emb|CBV36797.1| riboflavin biosynthesis protein RibF [Flavobacterium psychrophilum]
          Length = 310

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 22/310 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V  +G FDG+HLGH  I+ + +    N  +   VL+F+ HPR+++Q  S I  L+  
Sbjct: 14  KKTVATLGTFDGVHLGHQKIISRLLNNTQNKHLESVVLTFSQHPRSVLQVESNIKLLNTN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +  +LEK G   LI + F    +  + E F++ +LV+ L +K +I G   RFGK+RA 
Sbjct: 74  AEKIALLEKKGIDNLIIHPFDASFSELTGEDFVKNILVDQLNIKKIIIGYDHRFGKNRAS 133

Query: 136 DRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           D   L   G+KY F         IDE+       +SS+ IR A+   ++  A   LGY +
Sbjct: 134 DIHDLIYFGKKYHFDVEQISAKEIDEIS------ISSTKIRKAIQDANIKLANQYLGYNY 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
               +VI G+++GRT+GFPTAN+ +  +  I+ K GVY +    Q + ++ G+ N G  P
Sbjct: 188 LFAGNVIRGQQLGRTIGFPTANISIENTQKIIPKNGVYIVEGSWQGK-NHQGMMNIGTKP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      +E   F+ ++++Y    T+S  +++R E+KF  IE+LK  + +D     KI
Sbjct: 247 T-VDGKNTTIEVHFFNLNEDLYNLEITISVCEFIRAEVKFNSIEELKRQLQQD-----KI 300

Query: 309 LESSYPLSER 318
           +   Y  + R
Sbjct: 301 ISLDYFFNRR 310


>gi|330722376|gb|EGH00227.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC2047]
          Length = 321

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 5/278 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+H GH +IL Q  + A+  N P TV+ F P P            L+P   +
Sbjct: 23  VLTIGNFDGVHCGHQMILRQLREKADELNLPATVMVFEPQPLEFFAGQGAPARLTPFREK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L + G   +I   FT E    SA +F++ +LV  L VK +I G  FRFG+ ++GD  
Sbjct: 83  VRLLSEAGVDTVICLHFTDELRRQSASEFVKDILVGSLGVKYLIVGDDFRFGRKQSGDFQ 142

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++ GE++GF       L  N  Q VSS+ +R AL       A  LL   ++I   V++
Sbjct: 143 MLKQAGEQFGFGVTNTHTLVMN-GQRVSSTAVRDALNSSDFYLAEQLLARPYSISGRVMY 201

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLL 257
           G+++GRT+G PTAN+ L        GV+A+     ++     GVAN G  PT+    P +
Sbjct: 202 GQQLGRTIGVPTANLALKGKKAPLVGVFAVEVAGLEENKLVQGVANVGVRPTVGGKVP-V 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           LE  +F+F++ IYG+   V F   +R E KF  +E LK
Sbjct: 261 LEVHLFNFNRSIYGEHIRVVFRKKIRDEQKFDGLEALK 298


>gi|183222424|ref|YP_001840420.1| riboflavin biosynthesis protein RibF [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912464|ref|YP_001964019.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167777140|gb|ABZ95441.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167780846|gb|ABZ99144.1| Riboflavin biosynthesis protein RibF [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 309

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 161/304 (52%), Gaps = 7/304 (2%)

Query: 11  QSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           +S+ N  + G  + +GNFDGIH+GH  +L + ++ A     P  V+++ P+P  ++    
Sbjct: 8   ESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPSVVLGKKP 67

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS    +E+++   G   L+   FTLE +  +AE F++ ++++ L  K ++ G   
Sbjct: 68  NFKYLSSEREKEELIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKHIVIGYNH 127

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG +R GD  +L     KYG+  V + E    K   +SSS IR  L KG +  A  LLG
Sbjct: 128 FFGAERRGDFTLLNSNKSKYGY-AVELREAVLKKDSKISSSLIRGFLDKGEMEEAKILLG 186

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGR 246
             + I   VI G K GRT+GFPTAN+Q+  D LL   GVYA  F   D   + G+ N G 
Sbjct: 187 RNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYAC-FVKLDGKDHQGMVNIGF 245

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT    G L +E  +FDF   +YG+   +     +R E KF  IE LK  +  D++ + 
Sbjct: 246 NPTFDGLG-LHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDKETSL 304

Query: 307 KILE 310
           +IL+
Sbjct: 305 QILQ 308


>gi|309700238|emb|CBI99526.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Escherichia coli ETEC H10407]
          Length = 313

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R ALT  ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALTDDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|312128868|ref|YP_003996208.1| riboflavin biosynthesis protein ribf [Leadbetterella byssophila DSM
           17132]
 gi|311905414|gb|ADQ15855.1| riboflavin biosynthesis protein RibF [Leadbetterella byssophila DSM
           17132]
          Length = 311

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/321 (33%), Positives = 174/321 (54%), Gaps = 22/321 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++HN++  Q   N     VV  G FDG+HLGH  I+++ I+ A        +L+F PH
Sbjct: 1   MKIYHNLKDFQPKGN----AVVTTGTFDGVHLGHKKIIKRLIEKAKEIGGESVLLTFWPH 56

Query: 59  PRTIIQSSSPI-FTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P+ ++   S    T    +I+EK  +LE +G   L+   FT E +  S E++I++VL+  
Sbjct: 57  PKLVLSPDSHTRVTRILSTIEEKTELLETLGLDHLVILPFTREFSELSCEKYIEEVLISG 116

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIR 171
              K ++ G   RFGK+R G    L +  E++    + I+E+  N+ +I    +SS+ IR
Sbjct: 117 FGTKAMVIGYDHRFGKNREGGIDYLIQHSERF---KIEIEEI--NRQEIDNITISSTKIR 171

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIR 229
            A+ +G +  A  LLG  +     V+ G ++GR +G+PTAN+Q   +  L  K GVYA+ 
Sbjct: 172 KAIEEGDIQTANELLGRNYDFCGTVVKGRQLGRQIGYPTANVQTQNEFKLIPKNGVYAVY 231

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              + Q  + GV N G  PT+   G +  E +IFDFS +IYG+   V   D++R E KF 
Sbjct: 232 AWVRGQ-KFGGVMNIGVRPTVEGKG-ITQEVYIFDFSDDIYGESVKVEIVDFIREEQKFD 289

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            IE L   + +D   +++IL+
Sbjct: 290 SIEALIQQIKQDVIASQRILQ 310


>gi|304404297|ref|ZP_07385959.1| riboflavin biosynthesis protein RibF [Paenibacillus curdlanolyticus
           YK9]
 gi|304347275|gb|EFM13107.1| riboflavin biosynthesis protein RibF [Paenibacillus curdlanolyticus
           YK9]
          Length = 317

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 157/293 (53%), Gaps = 8/293 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP-IFTLSPPSIQ 78
           +AIG+FDG+H GH  ++ +A++ A N      VL+F+PHP+ ++      +  L+P   +
Sbjct: 13  IAIGHFDGVHKGHQDVIRRAVEAAGNQQRKSAVLTFHPHPKDVLSHGDQYVSCLTPLDAK 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +   ++G       KF  + AN S E+F+  VLV  L V+  + G  F FG   AGD G
Sbjct: 73  LERFAELGVDYTFVMKFDQDFANVSPERFVSDVLVP-LGVRHAVIGFDFHFGHRGAGDAG 131

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L   G +    T  ++ L  N  + VSS+ +R AL +G    A +LLG  + +   V+H
Sbjct: 132 MLTSLGSELNITTEVVEPLLLNGKK-VSSTYVREALGEGDAELAKYLLGRPYEVNGTVVH 190

Query: 199 GEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL- 256
           G   GRT+GFPTAN+ L +P +  + GVYA+ F      +Y  V N G  PT        
Sbjct: 191 GHARGRTIGFPTANIGLTAPYVTPRLGVYAV-FAEVGGVTYPAVMNHGMKPTFKDGETAP 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           ++E  +FDFS ++Y Q  TV F  +LR E KF  I++L   +G D  +AR  L
Sbjct: 250 VMEVHLFDFSGDLYDQTMTVRFHTFLRAERKFDSIDELIAQIGRDRDEARDRL 302


>gi|78212441|ref|YP_381220.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus sp.
           CC9605]
 gi|78196900|gb|ABB34665.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9605]
          Length = 313

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 156/294 (53%), Gaps = 5/294 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            +A+G+FDG+H GH  ++ +AI+ +    + +V+SF PHPR ++   + +  L  PS + 
Sbjct: 15  ALALGSFDGLHAGHRRVIAEAIQGSPEDAVASVVSFWPHPREVLFGEARL-RLDLPSEKL 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   L+   FT E A  SAE F+  VL+  L+ + +  GT FRFG  R GD  +
Sbjct: 74  ALLEPLGIQQLVLVPFTRELAQLSAEDFVTSVLLNTLQARRIAVGTNFRFGHQRRGDAEM 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   +       +  + + + ++ SSS IR AL +  +  A  LLG  +  +  V+ G
Sbjct: 134 LERLAARSCVEVKVVPIVEDGEGRM-SSSRIRAALDQADLATAKALLGRAYRFQGRVVRG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLL 257
             +G  LG+PTAN+Q+     L   GVYA   +   D      V N G  PT+ P  P  
Sbjct: 193 RGLGHELGWPTANLQVDGRKALPGLGVYAAWAQLDGDGDQLPAVMNLGPQPTIDPTSPSA 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E  + D S E+ G++  V     LR + KF  +E+L   +G D  +AR+IL++
Sbjct: 253 VEVHLLDQSLELEGRQLGVEPVQRLRGQTKFSGLEELSSQIGRDAAQAREILQT 306


>gi|283835085|ref|ZP_06354826.1| riboflavin biosynthesis protein RibF [Citrobacter youngae ATCC
           29220]
 gi|291069378|gb|EFE07487.1| riboflavin biosynthesis protein RibF [Citrobacter youngae ATCC
           29220]
          Length = 312

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMIFEPQPLELFATDKSPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A+ +A+ FI  +LV+ L V+ +  G  FRFG  RAGD
Sbjct: 76  EKLRYLAECGVDYVLCVRFDRRFASLTAQNFISDLLVKRLGVQFLAVGDDFRFGASRAGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G +YGF             +I SS+ +R AL   ++  A  LLG+ FTI   V
Sbjct: 136 FLLLQEAGAEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLQLAESLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+         + GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPFPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 311


>gi|226939542|ref|YP_002794615.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Laribacter
           hongkongensis HLHK9]
 gi|226714468|gb|ACO73606.1| Riboflavin kinase [Laribacter hongkongensis HLHK9]
          Length = 353

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+HLGH  IL    + A+  + P  +L+F PHPR +   ++P   L     +
Sbjct: 65  ALTIGNFDGVHLGHQAILRDLREEADRRDLPTALLTFEPHPRELFARNNPPARLMTLRDK 124

Query: 79  EKILEKMGFSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              L   G    +   +F    A+ + E FI ++L   L  + ++ G  FRFG  RAGD 
Sbjct: 125 LDFLASTGLVDRVHVLRFNHGLASLAPEVFIDRILRRLLHARFLLIGDDFRFGARRAGDF 184

Query: 138 GILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L      E     TV ID  R       SSS +R AL  G +  AA LLG  + I   
Sbjct: 185 STLAALPDIEVRAMSTVEIDGRR------ASSSLLRDALGAGQLDTAARLLGRPYQISGR 238

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG ++GR LGFPTAN+ L       +GV+A+   T   T + G A+ GRNPT+   G 
Sbjct: 239 VVHGRQLGRQLGFPTANICLPFKRPALQGVFAVECDTPAGT-FMGAASLGRNPTVETGGR 297

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE ++ DF+ ++YGQR TV F   LR E K+  ++ L   +  D    R++L
Sbjct: 298 YKLEVYLLDFTGDLYGQRVTVRFMAKLRDEAKYDSLDALVSQIHADVAATRRLL 351


>gi|119511247|ref|ZP_01630363.1| hypothetical protein N9414_18658 [Nodularia spumigena CCY9414]
 gi|119464125|gb|EAW45046.1| hypothetical protein N9414_18658 [Nodularia spumigena CCY9414]
          Length = 352

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 45/346 (13%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----------------EQAIKIANNSP 49
           ++ +  S+   LK   VA+G FDG+HLGHH ++                E  +  +++SP
Sbjct: 10  SMWVTSSMETLLKPTAVALGKFDGVHLGHHRVIQPILPPTKDEPRREDGENFLNYSDSSP 69

Query: 50  I--------TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLET 99
                    TV++F+PHP     +  P   L+P  ++EK+  L  +G   L+   F  E 
Sbjct: 70  TPPQEQTYSTVVTFDPHPLEFF-TGQPRPLLTP--LEEKVQQLRSLGVEQLVLLPFDKEL 126

Query: 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID---- 155
           +  S + F++++LV+ L+ + +  G  F FGK R G    LQ    KY      +     
Sbjct: 127 SALSPQDFVEQILVKQLQCRRISVGQDFCFGKQRRGTAKDLQLLAAKYHIPVTIVSLQTY 186

Query: 156 -ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ 214
            +    +   +S+S IR  L  G + NA  LLG  +T+   V+ G+K+GRT+GFPTAN+Q
Sbjct: 187 TDKAPTQEAPISTSLIRHYLESGDIKNANLLLGRPYTLIGTVVPGQKMGRTIGFPTANLQ 246

Query: 215 LSPDILL-KEGVYAIRFRTQDQTSYS-------GVANFGRNPTMVPNGP-LLLESFIFDF 265
           L  D  + ++GVYA+R     QT  +       GV N G  PT+  NG  L +E  +FD+
Sbjct: 247 LPKDKFVPRQGVYAVRAAILSQTPDATTPYQNLGVMNIGNRPTV--NGSNLSVEVHLFDW 304

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           S ++YG++  V   ++LRPE KF  +E LK  +  D   AR+ L +
Sbjct: 305 SSDLYGKQLGVQLVEFLRPEQKFPTLEDLKTQIQLDCTVAREHLSA 350


>gi|225390149|ref|ZP_03759873.1| hypothetical protein CLOSTASPAR_03899 [Clostridium asparagiforme
           DSM 15981]
 gi|225043802|gb|EEG54048.1| hypothetical protein CLOSTASPAR_03899 [Clostridium asparagiforme
           DSM 15981]
          Length = 318

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 157/291 (53%), Gaps = 11/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSS-SPIFTLSPPSI 77
           VV +G FDG H GH  ++ +   IK        V +F+  P  ++     P+ T +    
Sbjct: 17  VVTLGKFDGRHRGHQKLMRKMMEIKAGFGYETAVFTFSVTPAVMVTGQRQPVLTTNLE-- 74

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L+K G   L+ Y FT ET +   E+F+++VLV  +  + ++ GT   FG  R+G+ 
Sbjct: 75  RRNNLKKTGIDWLVEYPFTEETKHMQPEEFVREVLVNRMNARAIVVGTDCGFGYRRSGNA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L +   KYG+    I++ ++++  I SS+ IR  L KG+V  A  LLG  + I   V+
Sbjct: 135 QVLMELSGKYGYQLYVIEKEKDDRRDI-SSTYIREELEKGNVEKANGLLGEPYAIHGTVV 193

Query: 198 HGEKIGRT-LGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           HG  +G + LGFPTAN+ + P+I L  + GVY  R    D+  Y GV N GR PT+    
Sbjct: 194 HGRHMGGSVLGFPTANL-IPPEIKLLPRFGVYVSRVLV-DRRYYRGVTNIGRKPTIDGEN 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           P+ +E+FIFD  Q IYG    V    ++RPE  F  + +LK  +G D++ A
Sbjct: 252 PVGVETFIFDLEQNIYGHVIEVQLLSFIRPERTFASLGELKEQIGRDKETA 302


>gi|170782208|ref|YP_001710541.1| riboflavin kinase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156777|emb|CAQ01940.1| riboflavin kinase (FAD synthetase) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 310

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 164/314 (52%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V H+      +P       V IG FDG+H GH  ++ + + IA    ++  V++F+ H
Sbjct: 1   MLVVHD---PADVPGGFGPSAVTIGKFDGVHAGHRAVIRRLLGIAEEEGLSSAVVTFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  ++   +L     + ++L ++G  A +   F       S E+F++ VLV+ L  
Sbjct: 58  PAALLAPAARPQSLVSNRQKIELLAELGVDATLMLPFDERLQRLSPEEFVRTVLVDALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AGD   L + GE +GF TV + ++  + S+ VSS+ IR  + +G 
Sbjct: 118 RVVLVGEDFRFGAQGAGDAATLTRLGEVHGFRTVVVGDVMPDGSRKVSSTWIRDLMDRGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQ 235
           V  AA LLG    +   V+HGEK GR LGFPTAN  LSP+   ++  +GVYA   R  D+
Sbjct: 178 VEAAAELLGRAPAVRGVVVHGEKRGRELGFPTAN--LSPEAEGLIPADGVYAGWLRDGDR 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y    + G NPT     P ++E+F+ D + ++Y     V F   +R  + ++  E L 
Sbjct: 236 T-YPSAISVGTNPTFAGVRPRVVEAFVLDQTLDLYDHEVEVVFVARIRGMVAYEGREPLI 294

Query: 296 IYMGEDEKKARKIL 309
             M +D  + R +L
Sbjct: 295 AQMTDDVVRTRALL 308


>gi|16759039|ref|NP_454656.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16763435|ref|NP_459050.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29140589|ref|NP_803931.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62178609|ref|YP_215026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|167550783|ref|ZP_02344540.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167989898|ref|ZP_02570998.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230303|ref|ZP_02655361.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168234788|ref|ZP_02659846.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168262290|ref|ZP_02684263.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464424|ref|ZP_02698327.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820988|ref|ZP_02832988.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194442807|ref|YP_002039275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194469211|ref|ZP_03075195.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734968|ref|YP_002113056.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197248853|ref|YP_002145026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262735|ref|ZP_03162809.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200386646|ref|ZP_03213258.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927078|ref|ZP_03218280.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|207855561|ref|YP_002242212.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213163430|ref|ZP_03349140.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213852259|ref|ZP_03381791.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|224581882|ref|YP_002635680.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238910799|ref|ZP_04654636.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|289826108|ref|ZP_06545220.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25302150|pir||AH0507 FMN adenylyltransferase (EC 2.7.7.2) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418540|gb|AAL19009.1| flavokinase and FAD synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501329|emb|CAD01200.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136213|gb|AAO67780.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126242|gb|AAX63945.1| flavokinase and FAD synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194401470|gb|ACF61692.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194455575|gb|EDX44414.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194710470|gb|ACF89691.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632986|gb|EDX51440.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197212556|gb|ACH49953.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240990|gb|EDY23610.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197292041|gb|EDY31391.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199603744|gb|EDZ02289.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323743|gb|EDZ08938.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324347|gb|EDZ12186.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205331395|gb|EDZ18159.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205335177|gb|EDZ21941.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205342427|gb|EDZ29191.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348861|gb|EDZ35492.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707364|emb|CAR31636.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466409|gb|ACN44239.1| hypothetical protein SPC_0047 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245279|emb|CBG23064.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267991706|gb|ACY86591.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301156677|emb|CBW16147.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911015|dbj|BAJ34989.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|322615803|gb|EFY12723.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322620651|gb|EFY17511.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322621720|gb|EFY18570.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322627446|gb|EFY24237.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322630752|gb|EFY27516.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638028|gb|EFY34729.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641317|gb|EFY37957.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647652|gb|EFY44137.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651488|gb|EFY47865.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656559|gb|EFY52847.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658782|gb|EFY55039.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322661775|gb|EFY57991.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666478|gb|EFY62656.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322672363|gb|EFY68475.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322676325|gb|EFY72396.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322679582|gb|EFY75627.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684293|gb|EFY80297.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322713060|gb|EFZ04631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323128363|gb|ADX15793.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323191776|gb|EFZ77025.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198955|gb|EFZ84053.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323201021|gb|EFZ86090.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323209418|gb|EFZ94351.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212893|gb|EFZ97695.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323216637|gb|EGA01362.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323219865|gb|EGA04344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323226069|gb|EGA10286.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323228722|gb|EGA12851.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323236664|gb|EGA20740.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323239835|gb|EGA23882.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323242117|gb|EGA26146.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323247442|gb|EGA31397.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323250543|gb|EGA34425.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259273|gb|EGA42915.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263848|gb|EGA47369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323265556|gb|EGA49052.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270002|gb|EGA53450.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326626408|gb|EGE32751.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
 gi|332986997|gb|AEF05980.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 312

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 304


>gi|91789692|ref|YP_550644.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Polaromonas
           sp. JS666]
 gi|91698917|gb|ABE45746.1| FMN adenylyltransferase [Polaromonas sp. JS666]
          Length = 341

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 162/333 (48%), Gaps = 26/333 (7%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT 71
           P    G  + IGNFDG+H GH  +L      A +   P  V+SF PHPR    + +    
Sbjct: 10  PELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDYFAAVARKPE 69

Query: 72  LSPPSI---QEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+ E  + G    +   F    ++ + E FIQ VLV+ L  K V+ G  
Sbjct: 70  LAPARIATLRDKLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLGTKYVLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  RAGD  +L   GE+ GF    ++    + ++ VSSS +R AL +G +   A LL
Sbjct: 130 FRFGAKRAGDYAMLDAAGERLGFDVARMNSYEVHGTR-VSSSAVREALGEGRMDRVASLL 188

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  ++I   V+HG K+GR LGF T N++ S       G++A+           GVAN G 
Sbjct: 189 GRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPLPGVANLGI 248

Query: 247 NPTMVPN----GPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            P++ PN    G +LLE++  ++     ++  YG+   V     L  E+K+  ++ L+  
Sbjct: 249 RPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYDSLDSLQAG 308

Query: 298 MGEDEKKARKILESSYPLS---------ERDRI 321
           + +D   AR     ++  S          RDRI
Sbjct: 309 IAKDCDDARAFFAQAFSASMHTETSRQTTRDRI 341


>gi|15640700|ref|NP_230330.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121587778|ref|ZP_01677538.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 2740-80]
 gi|153818718|ref|ZP_01971385.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae NCTC
           8457]
 gi|153823934|ref|ZP_01976601.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|227080862|ref|YP_002809413.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae M66-2]
 gi|254851013|ref|ZP_05240363.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MO10]
 gi|255743860|ref|ZP_05417816.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholera CIRS 101]
 gi|262156079|ref|ZP_06029198.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|298500795|ref|ZP_07010598.1| riboflavin biosynthesis protein RibF [Vibrio cholerae MAK 757]
 gi|9655120|gb|AAF93846.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548005|gb|EAX58085.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 2740-80]
 gi|126510740|gb|EAZ73334.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae NCTC
           8457]
 gi|126518545|gb|EAZ75768.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|227008750|gb|ACP04962.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae M66-2]
 gi|254846718|gb|EET25132.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MO10]
 gi|255738491|gb|EET93880.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholera CIRS 101]
 gi|262030115|gb|EEY48760.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|297540576|gb|EFH76634.1| riboflavin biosynthesis protein RibF [Vibrio cholerae MAK 757]
          Length = 322

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 76  DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 132

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+   F  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 133 QGNFALLQQAGQALDFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 187 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 247 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|239917234|ref|YP_002956792.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
 gi|281414291|ref|ZP_06246033.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
 gi|239838441|gb|ACS30238.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
          Length = 325

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 17/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+++++    +P  L   VV +GNFDG+H GH  +L + +++A    +    ++F PH
Sbjct: 1   MRVWNSLD---EVPTDLPRTVVTLGNFDGVHRGHREVLRRVVELARARGALAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q   P   +  P  +  +LE+ G  A++  ++TLE A+ S E+F++ +LV  L  
Sbjct: 58  PRAVHQPEVPHVDIISPEQRVVLLEEAGLDAVLLQRYTLEFADQSPEEFVRGMLVHGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS----QIVSSSNIRTAL 174
             V+ G   RFG+   GD   + + G  YGF    ++E          +  SS+ +R AL
Sbjct: 118 AVVVVGHDVRFGRGNTGDVAEMVRLGAHYGFEVEAVEEFPAEHGAEPERRCSSTWVREAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQ 233
             G V  AA +LG    +  +V+HG   GR LGFPTAN++     ++  +GVYA      
Sbjct: 178 DAGDVAQAAAVLGRHHVLTGEVVHGFARGRELGFPTANLETDVQGMIPADGVYAGWVHDA 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIK 287
               +    + G NPT   +   ++E+ + D   E      +YGQ   V F   LR  + 
Sbjct: 238 HGGVWPAAISIGSNPTF-EDVSRVVEAHVIDRHDERVEDFDLYGQHIEVEFVARLRGMVA 296

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           ++ +EKL   + +D  +AR IL ++
Sbjct: 297 YEGVEKLVAQITQDVDEARAILATT 321


>gi|168243564|ref|ZP_02668496.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194448015|ref|YP_002044011.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194406319|gb|ACF66538.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205337533|gb|EDZ24297.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 312

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLYYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 304


>gi|319760261|ref|YP_004124199.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318038975|gb|ADV33525.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 315

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 154/296 (52%), Gaps = 13/296 (4%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
            HNI+     P H KG ++A+GNFDG H GH L++    +   N   PI V+ F PHPR 
Sbjct: 7   LHNIK-----PYH-KGCILAMGNFDGFHRGHQLLINILCEKKKNYKLPIMVMIFEPHPR- 59

Query: 62  IIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +  S I  +     ++KI  L   G   ++   F  + A+  A  F++K+L+  L V+
Sbjct: 60  --EFFSKIVRIRLSKFRDKIQYLFTAGVDIILCIAFNKKFASTEAYNFVKKILIYKLGVQ 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG  R GD   L+K G + GF    I+   +   Q +SS++I+ AL +  +
Sbjct: 118 FICIGNDFRFGACRKGDYKFLKKIGNQEGFQVACIETCVDKLGQKISSTSIKIALMEDRI 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
           ++A  L+G+ + +   VIHG K+GR +GFPTAN+ L    L   GVYA+           
Sbjct: 178 MDAEFLMGHAYRVFGKVIHGNKLGRIIGFPTANVFLQGKQLPMNGVYAVTVYGVCDLPLP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           G+AN G  PT+  +    LE  IF+ S ++Y +  TV F   +R E  F+ I  LK
Sbjct: 238 GIANIGIRPTITGSSIQQLEVHIFNISIDLYLRYITVVFLKKIRNEQYFRSIRMLK 293


>gi|169831093|ref|YP_001717075.1| riboflavin biosynthesis protein RibF [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637937|gb|ACA59443.1| riboflavin biosynthesis protein RibF [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 308

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 157/292 (53%), Gaps = 6/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +GNFDG+HLGH  ++ + ++ A        + +F+PHP ++++       L     +
Sbjct: 18  VLGLGNFDGVHLGHQELIRRMVERARRLGGVPGIFTFHPHPVSVLRPEHAPPLLLTQETK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E+I+  +G   L+R  FTLE A  S E+FI+ VL   L V +V  G  + FG    G   
Sbjct: 78  EEIIAGLGVRLLLRIPFTLEFARLSPEEFIRDVLYTQLGVVSVFVGYNYTFGHRGRGTPA 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +  + YGF T  ++ +     ++VSS+ IR  L++G V  A   LG+   ++  V+ 
Sbjct: 138 TLAQLSQIYGFETNVVEPV-EVAGEVVSSTRIRELLSRGRVEEARRFLGFAPFVDGMVVS 196

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGPL 256
           G+  GR LGFPTAN++ SPDIL+   GVYA++     Q  +SGVAN G  PT    +   
Sbjct: 197 GDGRGRRLGFPTANLETSPDILIPANGVYAVKAEISGQ-RHSGVANIGYRPTFTGADSGR 255

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            LE  +FD +  +YG+   V F  Y+R E KF    +L   +  D ++AR +
Sbjct: 256 NLEVHLFDVADNLYGKSMRVFFSRYIRGERKFGSPAELIRQIEADIRQARAV 307


>gi|303229659|ref|ZP_07316447.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515784|gb|EFL57738.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 309

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 161/295 (54%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDG+H GH  ++  AI  A  +  +TVL +F+ HP TI++       +    I 
Sbjct: 18  VYALGTFDGVHRGHQRVIGNAIAEAKAHDAVTVLVTFSAHPMTILRPGDVPKRVLSADIM 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++ILE +    ++R    L+  N S ++F+  +  + ++V  +  GT F FG   AG+  
Sbjct: 78  DEILESLKVDYILRLPMNLDIFNMSPDKFLDALCGD-IDVVGIAIGTNFTFGAKGAGNPQ 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++++R    G H + ++ L + +   + S+NIR A+  GH+  A   LG  +     VI 
Sbjct: 137 LMRERLSAKGIH-IIVEPLLSTEEGPICSTNIRKAIEDGHMEQATAWLGRPYQFRGIVIK 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GRTLGFPT N  L  ++ +  +GVYA R    D   Y GV N G NPT   N    
Sbjct: 196 GDQRGRTLGFPTINFLLPNEMAIPPDGVYANRV-CIDGIWYDGVGNIGDNPTF-KNQYHR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            E  +FDF Q++YG+  TV F  Y+R E+KF ++++L   M  DE+ A +IL ++
Sbjct: 254 CEVHVFDFDQDVYGKEVTVQFISYIRGEVKFNNLQELIDQMKVDEETAIRILRNN 308


>gi|260589523|ref|ZP_05855436.1| riboflavin biosynthesis protein RibF [Blautia hansenii DSM 20583]
 gi|260540091|gb|EEX20660.1| riboflavin biosynthesis protein RibF [Blautia hansenii DSM 20583]
          Length = 316

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 159/303 (52%), Gaps = 9/303 (2%)

Query: 16  HLKGGV---VAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           HL  G+   V +G FDG H GH  ++E    K   N    + +F+   +   Q   P   
Sbjct: 9   HLNSGIRSAVTLGKFDGFHRGHQKLVECIKQKSGENCRTIIFTFDLPYKAYQQKCMPKLL 68

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +E + E +    L    FT E  N   E F+++ LV+ L  + V  G+ F FG 
Sbjct: 69  LTYEEKRE-VAEALHADILAECPFTEELMNMEPEVFVKEYLVDRLHAEYVAIGSDFHFGH 127

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R+G+  +L   GEKYGF    I++ R+ + +I SS+ IR  L +G +     LLGY + 
Sbjct: 128 NRSGNPEVLSALGEKYGFTVEIIEKERDGEREI-SSTYIREELEQGRMEKVQKLLGYPYF 186

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           I+ +++HG ++GRT+G PTAN+   P   L   GVY  +     +  YSG+ N G  PT+
Sbjct: 187 IKGEIVHGRQLGRTIGVPTANLIPPPMKKLPPNGVYVTQSSVGGKV-YSGITNVGYKPTV 245

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             N  + +E+++F  ++++YGQ   V F+ YLRPE KF  + +LK  +  D + AR   E
Sbjct: 246 KENF-IGVETYLFHCNEDLYGQEAEVRFYKYLRPEKKFDSLSELKTQLDIDVETARAFFE 304

Query: 311 SSY 313
             Y
Sbjct: 305 KEY 307


>gi|169350217|ref|ZP_02867155.1| hypothetical protein CLOSPI_00961 [Clostridium spiroforme DSM 1552]
 gi|169293000|gb|EDS75133.1| hypothetical protein CLOSPI_00961 [Clostridium spiroforme DSM 1552]
          Length = 310

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 13/305 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I +N+   + LK   VA+G FDG+HLGH  ++E+ I++AN  N    +L+F+ HP++ + 
Sbjct: 6   IYLNKECNDDLKDSCVALGFFDGMHLGHQKLVEKVIEVANKKNLKKALLTFDQHPKSYLA 65

Query: 65  SSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           + S   + +L   ++    LE+ GF  L   KF  E A+  A  FI + +V+   +K +I
Sbjct: 66  NVSFKELMSLDDKAM---FLEEYGFDYLFVLKFDFELASMRALDFINEFIVKT-NIKHII 121

Query: 123 TGTKFRFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  F FGK+  G+   ++Q     Y    +   E  ++K   +SSS ++ ALT G+V  
Sbjct: 122 CGFDFHFGKNGEGNFETLIQNEKNNYEVSVIKKQEYNHHK---ISSSYLKEALTNGNVEL 178

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
              LLG  + +   V+HG K GR +GFPT N+  +   L K GVY +     D   Y G+
Sbjct: 179 VEKLLGRYYCVSGKVVHGLKNGRKIGFPTVNIDANNYFLPKNGVYGV-IIVIDGKRYLGM 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G NPT      + LE  IFDF Q++YG+  TV F   +R E +F  I++L   + +D
Sbjct: 238 ANLGYNPTFNVLTKVSLEVNIFDFDQDVYGKYVTVFFIKKIRYEKRFNSIDELINQLNQD 297

Query: 302 EKKAR 306
            K+ +
Sbjct: 298 RKQIK 302


>gi|120403339|ref|YP_953168.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956157|gb|ABM13162.1| riboflavin kinase / FMN adenylyltransferase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 324

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 21/320 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
              +P      VV IG FDG+H GH  ++ +A+K   +   P+ +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVVTIGVFDGVHRGHQELISRAVKAGRSRGVPVVLMTFDPHPMEVVFPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + E++I ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTSDFMKLTPERYIHELLVERLHVVEVLVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG+  +L+K GE++GF       + E   +++   SS+ IR+ +  G ++ AA 
Sbjct: 127 TFGKKAAGNVDLLRKAGERFGFAVDSLSLVAEHHQDETVAFSSTYIRSCVDAGDMVAAAE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---- 237
            LG    +E  V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F     +     
Sbjct: 187 ALGRPHRVEGVVVRGDGRGRVLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHSPVVGT 244

Query: 238 ------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D S ++YGQ   V F   LR + KF  +
Sbjct: 245 VTPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVARLRGQEKFDSV 303

Query: 292 EKLKIYMGEDEKKARKILES 311
             L   MG D ++AR +L +
Sbjct: 304 ADLVTAMGADTERARALLSA 323


>gi|262360600|gb|ACY57321.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D106004]
          Length = 295

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  AKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDDLVLAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPLYGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG    V     LR E +F  +E LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQIANDVVTARTFFGLKTPV 295


>gi|254521473|ref|ZP_05133528.1| riboflavin biosynthesis protein RibF [Stenotrophomonas sp. SKA14]
 gi|219719064|gb|EED37589.1| riboflavin biosynthesis protein RibF [Stenotrophomonas sp. SKA14]
          Length = 315

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 159/309 (51%), Gaps = 8/309 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+    A       ++F P PR
Sbjct: 4   LFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P   L+    + +IL ++G  A+   +F    A   AE+F++++LV  L  + 
Sbjct: 61  EFFAQGTPPPRLTLARSKVEILRELGVDAIGLLRFDAAMAAMPAEEFVRRLLVHRLGARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L  G   
Sbjct: 121 VWIGPEFCFGNRRRGDLALLQKMGAELGFSAGEIEAV-DLHGERISSTRIRQLLQDGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          +  
Sbjct: 180 RAGDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M  
Sbjct: 239 VSSFGTRPTVDGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMHR 297

Query: 301 DEKKARKIL 309
           D ++AR IL
Sbjct: 298 DAEQARAIL 306


>gi|90416601|ref|ZP_01224532.1| hypothetical protein GB2207_05347 [marine gamma proteobacterium
           HTCC2207]
 gi|90331800|gb|EAS47028.1| hypothetical protein GB2207_05347 [marine gamma proteobacterium
           HTCC2207]
          Length = 311

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 153/281 (54%), Gaps = 14/281 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           VV IG+FDG+H+GH  IL Q +K A+     P   ++F P P+    +      L    +
Sbjct: 18  VVTIGSFDGVHIGHQAILRQ-VKEASQRLQLPSVAMTFEPQPKEYFSAEQAPARLM--RL 74

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           +EKI  L ++G  +++  +F     N SA  FI +VLV  L V+ +I G  F FG DR+G
Sbjct: 75  REKIDTLLELGVDSVVCLQFNRRLRNLSAADFIDQVLVRGLAVRHLIVGDDFHFGCDRSG 134

Query: 136 DRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           D   LQ++GE+ GF  H     E+   + Q VSS+ +R  + +     AA LLG  F+I 
Sbjct: 135 DFARLQQKGEQCGFDVHDTATVEV---EGQRVSSTLVREVVEQADFPRAAALLGRPFSIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V +G+++GR LGFPTAN+QL        GV+A++      T Y G AN G  PT+   
Sbjct: 192 GVVGYGQQLGRELGFPTANVQLCRFSAPLSGVFAVQVNVAG-TLYRGAANVGLRPTVGDL 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +LE  + DF+ ++YGQR  V F   +R E KF  +EKL
Sbjct: 251 VKPILEVHLLDFAGDLYGQRIAVEFLHKIRDEEKFTTVEKL 291


>gi|114566437|ref|YP_753591.1| riboflavin biosynthesis protein RibF [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337372|gb|ABI68220.1| riboflavin kinase / FMN adenylyltransferase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 319

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 8/303 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+GNFDG+H GH  ++   +K A  NN       F PHP  ++  S     L     + 
Sbjct: 19  LALGNFDGVHRGHQRLIGDLVKKARANNGIAAAFIFEPHPAMVLNPSRAPKLLVTAERKA 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++ K+G   LI   F L  +  S E+F++ +LVE L+++    G  + FG   +G   +
Sbjct: 79  ELMNKLGLDKLIYNTFDLAISQCSPEEFVKSILVERLKIREAFVGFNYSFGHKGSGTPQL 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G+KY F    I  +   K Q+VSS+ IR AL  G +  A  +LGY   IE  VI G
Sbjct: 139 LKELGKKYDFQVNIIPPVE-IKGQVVSSTIIRQALDAGDMELAREMLGYYPMIEGKVIEG 197

Query: 200 EKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           EK G T+GFPTAN+ +  ++ +  +GVYA      +  ++    N G  PT     P+ +
Sbjct: 198 EKRGATIGFPTANLGIGAELNIPVKGVYAA-LAVLEGENFGAAVNIGSKPTFHQEYPVSV 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           E+ + DF++++Y Q   + F   +R E +F  +++L   +G D K+A +I ES   L  R
Sbjct: 257 EAHLIDFNRQVYDQDLRLFFLQKIRDEKRFSSVDELIKQIGLDRKQAGEIYES---LESR 313

Query: 319 DRI 321
            +I
Sbjct: 314 GKI 316


>gi|171057922|ref|YP_001790271.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptothrix
           cholodnii SP-6]
 gi|170775367|gb|ACB33506.1| riboflavin biosynthesis protein RibF [Leptothrix cholodnii SP-6]
          Length = 345

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 155/318 (48%), Gaps = 22/318 (6%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT 71
           P       + IGNFDG+H GH  +L      A +   P  VLSF PHPR    + S    
Sbjct: 10  PGLAAACALTIGNFDGVHRGHQAMLALLQNEARHRGLPSCVLSFEPHPRDFFATVSGKPG 69

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  LE+ G   ++  +F    A  S + FI +VLV+ L  + V+ G  
Sbjct: 70  LAPARIATLRDKLGELERCGVDQVVLMRFDARFAALSPQAFIDEVLVQGLGARYVLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  RAGD  +L   G   GF    +     + ++ VSSS +R ALT G +   A LL
Sbjct: 130 FCFGAKRAGDYAMLDAAGSAAGFDVARMMSYEVHGTR-VSSSAVREALTGGDMARVAELL 188

Query: 187 GYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           G  ++I   V+HG K+GR+L         GF T N++ +       G+YA+R     +  
Sbjct: 189 GRPYSISGHVVHGRKLGRSLGETTIGAADGFRTLNVRFTHGKPAANGIYAVRVSGLTEQP 248

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDIE 292
             GVA+ G  PT+   G +LLE+F FD+  ++     YG+   V     LR E ++  ++
Sbjct: 249 LEGVASLGVRPTVEDAGRVLLETFCFDWPAQLGAEGGYGKIARVELLCKLRDEARYDGLD 308

Query: 293 KLKIYMGEDEKKARKILE 310
            L   +G+D   AR   E
Sbjct: 309 ALTAAIGQDIANARAYFE 326


>gi|113475532|ref|YP_721593.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Trichodesmium erythraeum IMS101]
 gi|110166580|gb|ABG51120.1| FMN adenylyltransferase / riboflavin kinase [Trichodesmium
           erythraeum IMS101]
          Length = 368

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 169/365 (46%), Gaps = 64/365 (17%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------------------ 50
           I  SL   L    VA+GNFDG+H GH  ++E  + +   S +                  
Sbjct: 3   ITSSLATALTPTAVALGNFDGLHQGHRQVIEPILNLKGRSKLLSVCPSELTRTTEVDEDT 62

Query: 51  ---------------------------------TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
                                            TV++FNPHP+    S  P   L+P   
Sbjct: 63  KLKLWHQDSKLSSWHFENELGKNDDYLRQKIYSTVVTFNPHPQEFF-SGKPKKLLAPLEE 121

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  I + +G   ++   F    A+ +  +F++++LV+ L+V  +  G  F FG+ RAG  
Sbjct: 122 KLAIFKHIGVEQVVLLPFDRNLADLTPNKFVEEILVKGLQVHQISVGCDFCFGQKRAGKA 181

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ     Y      +    +   + +SSS IR AL KG +  +  LLG  +++  +V+
Sbjct: 182 KDLQAIAGYYDIDVTTVPLYHSENGERISSSIIRQALEKGDLDKSNRLLGRPYSLIGEVV 241

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ----------TSYSGVANFGR 246
           HG+++GRTLGFPTAN+QL+    L   GVYA+      Q          + Y GV N G 
Sbjct: 242 HGQQLGRTLGFPTANLQLAAQKFLPRFGVYAVEVYLSRQKQPQEILHAESPYLGVMNVGC 301

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+    P  +E  + D SQ++YGQ  TV+  ++LRPE KF  ++ LK  + ED + AR
Sbjct: 302 RPTLNSLDP-TVEVHLLDMSQDLYGQTLTVNLIEFLRPEQKFASLDLLKAQIYEDCRIAR 360

Query: 307 KILES 311
            IL++
Sbjct: 361 SILKN 365


>gi|120553793|ref|YP_958144.1| riboflavin biosynthesis protein RibF [Marinobacter aquaeolei VT8]
 gi|120323642|gb|ABM17957.1| FMN adenylyltransferase / riboflavin kinase [Marinobacter aquaeolei
           VT8]
          Length = 322

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 153/298 (51%), Gaps = 15/298 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+H GH  I++Q    A   N P  V+ F P P+   + +     L P  
Sbjct: 24  GCVATIGNFDGVHRGHKTIIDQVRGKAQALNLPSVVMIFEPQPQEFFKGAEAPPRLMPFR 83

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L   G   ++  +F     +YS   FI+ VL+  L V+ ++ G  FRFG DRAGD
Sbjct: 84  QKFEALLGEGVDVVLCIRFDETFRSYSGMGFIEDVLIHGLGVRHLVVGDDFRFGCDRAGD 143

Query: 137 RGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +LQ  G++ GF      TV +D  R      VSS+ +R AL    +  A  LLG+ + 
Sbjct: 144 FRLLQSVGQERGFTVENTRTVVVDGER------VSSTRVRNALNVNGLEEAERLLGHPYR 197

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V++G ++GR +G PTAN+ L     L+ GVY +R R        GVAN G  PT+ 
Sbjct: 198 IHGRVVYGRQLGRQIGAPTANILLHQMPALR-GVYVVRARLDTGEWRDGVANIGLRPTVD 256

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              P  LE  +FDF+  +YGQ   V F   LR E+KF  +++L+  +  D + AR  L
Sbjct: 257 GKRP-SLEVHLFDFAGTLYGQHLEVVFRHGLRDEVKFDSVDELRQQIARDFEHARAWL 313


>gi|331661389|ref|ZP_08362313.1| riboflavin biosynthesis protein RibF [Escherichia coli TA143]
 gi|331061304|gb|EGI33267.1| riboflavin biosynthesis protein RibF [Escherichia coli TA143]
          Length = 313

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR++   + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTARELFGLTKP 312


>gi|163753731|ref|ZP_02160854.1| bifunctional protein: riboflavin kinase; FAD synthetase [Kordia
           algicida OT-1]
 gi|161325945|gb|EDP97271.1| bifunctional protein: riboflavin kinase; FAD synthetase [Kordia
           algicida OT-1]
          Length = 310

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 160/296 (54%), Gaps = 5/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            + IG FDG+H+GH  I+E  I  +      +L+F PHPR ++Q  + I  ++    + +
Sbjct: 17  AITIGTFDGVHVGHKKIIENLIAKSEGLDTMLLTFFPHPRMVLQQDANIKLINTIDERIQ 76

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE  G + LI Y F  + +   A  F++  L+  L +K +I G   RFG++R  +   L
Sbjct: 77  LLEATGLNTLIIYPFNRKFSRLKASDFVRDFLIAHLNLKKIIIGYDHRFGRNRTANIDDL 136

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++ GE + F    I + +      +SS+ IR AL +G +  A   LGY F +   VI G+
Sbjct: 137 REFGEAFDFKVEEI-QAKEIDDVTISSTKIRKALNEGDIATANAYLGYEFMLTGTVISGK 195

Query: 201 KIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +G T+ FPTAN+ +  D  L  K+GVY ++    ++T + G+ N G NPT V      +
Sbjct: 196 GLGNTINFPTANIHIKEDYKLIPKQGVYFVKSMIDEKTVF-GMMNIGTNPT-VAGKKQTI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E   FDF ++IY ++  V   + LR E KF  + +L+  + +D++ + +++++ + 
Sbjct: 254 EVHFFDFDRDIYNEKIQVRLIERLRDEQKFDSVTQLQAQLQKDKQTSLQLIQNYHA 309


>gi|158335801|ref|YP_001516975.1| riboflavin biosynthesis protein RibF [Acaryochloris marina
           MBIC11017]
 gi|158306042|gb|ABW27659.1| riboflavin biosynthesis protein RibF [Acaryochloris marina
           MBIC11017]
          Length = 307

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHPRTIIQSS-SPIFTLSPPSIQ 78
           V+A+GNFDGIH GH  +++  +   ++ + +TV++FNPHP+        P+ T  P S +
Sbjct: 15  VIALGNFDGIHQGHCQVIQSLLSNRSDTAQVTVVAFNPHPQAFFSGEHQPLLT--PLSEK 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE +G   L+   F    AN S + F++ +LV  L+ + +  G  F FG  RAG   
Sbjct: 73  ATLLENLGVDQLVLIPFDQALANLSPQDFVKDILVAQLQAQFISVGFNFCFGYQRAGTAE 132

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L     +Y    V I   + N S+ +SSS IR AL +G++  A  +LG  + +   V+ 
Sbjct: 133 DLVAIAGQYQI-PVSITAPQTNGSEPISSSAIREALLEGNLEKAQQMLGRAYDLTGTVVK 191

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPL 256
           G+++GRTLGFPTAN+Q+  D    + GVY++   +   +    GV N+G  PT+    P 
Sbjct: 192 GQQLGRTLGFPTANLQVPTDKFCPRTGVYSVSVTSNLWSQPQPGVMNWGCRPTVDGQQP- 250

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LE  + D+S ++YG   TV    +LR E KF  +  LK  +  D + AR  L +
Sbjct: 251 SLEVHLLDWSGDLYGHTVTVHLQQFLRSEQKFASLADLKAQIQADCEIARASLAA 305


>gi|325281018|ref|YP_004253560.1| riboflavin biosynthesis protein RibF [Odoribacter splanchnicus DSM
           20712]
 gi|324312827|gb|ADY33380.1| riboflavin biosynthesis protein RibF [Odoribacter splanchnicus DSM
           20712]
          Length = 309

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 15/300 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII---QSSSPIFTLSPP 75
           VV IG+FDG+H GH  ++E   ++A N      ++SF PHPR ++   +    I T    
Sbjct: 16  VVTIGSFDGVHKGHVQVIESLKRVARNLKGETVIISFEPHPREVLYPMEKRPGILT---- 71

Query: 76  SIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           +++EK  IL   G   L+  +FT   A      F++ +LV+ + +K ++ G   RFGK+R
Sbjct: 72  TLEEKAAILATYGVEHLVVLQFTRSLAELEYADFVRHILVDKIGLKGLVVGYDHRFGKNR 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    L++  ++Y F+    +    N+  I SS+ IR AL  G +      LGY +++ 
Sbjct: 132 EGTFEKLKELADRYHFYLEQEEVYEENQINI-SSTKIRNALQIGDIDRVNEFLGYTYSVS 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G+KIGR++GFPTAN++L+ D  +L   GVYA++ + + Q  Y G+ N G  PT+ 
Sbjct: 191 GKVVAGDKIGRSMGFPTANIRLNDDRKLLPAAGVYAVKVKVEGQ-EYRGMLNIGVRPTVS 249

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +G + +E  IFDF  +IYG+   +     +R E KF  I++L   + +D ++   +L+ 
Sbjct: 250 CSGVVRIEVNIFDFDADIYGKEIRLLLIARIRGERKFNGIDELSEQLKKDRQEVSVLLQQ 309


>gi|159028394|emb|CAO89836.1| ribF [Microcystis aeruginosa PCC 7806]
          Length = 319

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 162/296 (54%), Gaps = 6/296 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L    +A+GNFDG+HLGH  +L+   +     P TV+SF PHPR    +      L+P  
Sbjct: 24  LAPSAIALGNFDGLHLGHQTVLQPIFQDEPAYP-TVVSFTPHPREFF-TGEKWQLLTPLG 81

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE +G   L+   F+ + A+ +   FI+++LVE L+ K++  G  FRFG  R G 
Sbjct: 82  EKVEVLENLGVKQLVLLPFSAQLASLTPLAFIKQILVEKLQAKSISIGQDFRFGYRRQGT 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +   ++    V I  L+N  +  +SSS IR AL  G+V  A  +LG  +++   V
Sbjct: 142 AEDLLQIASQFNIK-VEIVALKNCGTGRISSSLIRQALAAGNVEQAGQMLGRPYSLTGRV 200

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + G+++GRTLGF TAN+Q+ PD LL + GVY   +   D +    V N G  PT +    
Sbjct: 201 VIGQQLGRTLGFHTANLQVPPDKLLPRLGVYC-GWVHLDGSRLPAVMNIGYRPT-IEGKT 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E  + D+S  +Y +  T+    +LRPE KF  +++LK  +  D  ++R IL S
Sbjct: 259 ISVEIHLLDWSGNVYDRILTMDLVQFLRPEQKFNSLDRLKNQIEIDCDRSRLILTS 314


>gi|33151512|ref|NP_872865.1| riboflavin biosynthesis protein RibF [Haemophilus ducreyi 35000HP]
 gi|33147732|gb|AAP95254.1| riboflavin biosynthesis protein RibF [Haemophilus ducreyi 35000HP]
          Length = 326

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 29/320 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRT 61
           FHN+    +L    KG V+ IGNFDG+H+GH  IL +     +A   P  V+ F P PR 
Sbjct: 7   FHNLANYDALK---KGCVLTIGNFDGVHIGHQNILARLCDQSLAIGLPSVVMLFEPQPRE 63

Query: 62  II------QSSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQK 110
                   Q++S +    P  +       K L +MG   ++   F  + A YSAE FI +
Sbjct: 64  FFAKNSQNQTASALSNAVPARLMRLRDKLKYLAEMGVDFVLCVNFNQKFAKYSAEDFITE 123

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIV 165
           +LV+ L+V+ +  G  FRFG +R G+  +L+  G  + F     HT   D LR      +
Sbjct: 124 LLVKKLKVRYLSVGDDFRFGIERRGNFEMLRNAGLTHRFAVEESHTHRFDTLR------I 177

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGV 225
           SSS IR AL +  +    +LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV
Sbjct: 178 SSSLIRQALQQNDLALVENLLGKPYSIRGRVAHGNKLGRTIGFPTANIMLNRLVTPIQGV 237

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           + +  +T     ++G+AN G  PT+    P LLE  IFDF+  IY Q   V F   +R E
Sbjct: 238 FIVEVQT-IYGRFNGIANVGNRPTINGTKP-LLEVHIFDFNNAIYHQIIEVIFIKKIRDE 295

Query: 286 IKFKDIEKLKIYMGEDEKKA 305
           +KF     LK  + +D ++A
Sbjct: 296 LKFASFTLLKEQIEKDCQQA 315


>gi|323970818|gb|EGB66071.1| riboflavin biosynthesis protein RibF [Escherichia coli TA007]
          Length = 313

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPAKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|21672433|ref|NP_660500.1| riboflavin biosynthesis protein RibF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091145|sp|Q8K9Z1|RIBF_BUCAP RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|21623044|gb|AAM67711.1| riboflavin biosynthesis protein RibF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 312

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 3/292 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              V+IGNFDG+HLGH  +L    KI   NN    ++ F P P   + + +    L+   
Sbjct: 16  NSAVSIGNFDGVHLGHQKLLSNLYKIGKKNNILTVLILFEPQPLEFLNNKNSPKRLTTIQ 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K ++      ++  KF    ++ SAE+FI+ +L+  L +K +I G  FRFG  R G+
Sbjct: 76  NKIKYIQSWKIDIILCIKFNESFSSLSAEKFIKNILITKLNIKFIIIGDDFRFGSKRNGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ G +Y F  + I  L       +SS+NIR  L +  +  A  LLG  F+I   V
Sbjct: 136 ISLLKEIGYQYNFKVIEISSLLYKNKIKISSTNIRKCLLENKIELARKLLGRPFSISGRV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP- 255
           IHG KIGR LG+PTAN+ L  +I L  GVYA++        + G+ N G  P+   +   
Sbjct: 196 IHGNKIGRKLGYPTANISLRKNIPLNNGVYAVKISCFFNKKFVGICNIGIKPSYFSSKKH 255

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LLE  +F+F+  +Y ++  V  +  +R E  F    KLK  + +D +  +K
Sbjct: 256 RLLEVHLFNFNLNLYEEKIEVFLYKKIRNECFFSSKNKLKEQISKDIEIVKK 307


>gi|207723590|ref|YP_002253989.1| riboflavin biosynthesis protein [Ralstonia solanacearum MolK2]
 gi|206588792|emb|CAQ35755.1| riboflavin biosynthesis protein [Ralstonia solanacearum MolK2]
          Length = 354

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 5/313 (1%)

Query: 6   NIEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           ++++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR 
Sbjct: 22  HVKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPRE 81

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     ++    + + L + G   ++   F    A  +  +F++ VLV+ L  + +
Sbjct: 82  FFMPDRAPTRIALLRDKLESLRRQGVDHVVVEHFNAHFAAQTPTEFVRNVLVDGLHTRWL 141

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  RAGD   LQ  G ++ F    +  +  +  +I SSS +R AL  G + +
Sbjct: 142 LVGDDFRFGAKRAGDFTYLQAAGAQFDFEVEQMGSVSESGIRI-SSSAVREALAAGDLEH 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     V
Sbjct: 201 ARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  PT+  +G +LLE  IFD+    YG+   V F   LR E +F  ++ LK  +  D
Sbjct: 261 ASIGVRPTVDDSGRVLLEVHIFDYHANAYGKLVRVEFMKKLRDEARFDSLDALKDAIARD 320

Query: 302 EKKARKILESSYP 314
              AR     + P
Sbjct: 321 CVDARHFFGLALP 333


>gi|187932656|ref|YP_001885475.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720809|gb|ACD22030.1| riboflavin biosynthesis protein RibF [Clostridium botulinum B str.
           Eklund 17B]
          Length = 308

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 7/276 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H+GH  ++++  +IA  NN    V +F  HPR  I  ++ +  L     + 
Sbjct: 18  VALGSFDGLHIGHLSLIDEVTRIAGKNNGKSMVFTFKNHPRKFINPNNTLKLLMENDDKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE  G        F  E    + E+FI K L   L VK ++ G  ++FG    GD  +
Sbjct: 78  KMLEDKGIDIAYFANFNEEFMKITPEEFI-KFLCVNLNVKGIVVGFNYKFGYKNLGDTKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +KYG+    +D     K +++SS+ IR  L  G+VL A+  L   + I+ +++HG
Sbjct: 137 LKELQKKYGYELHIMDSCTY-KDEVISSTRIRKELETGNVLEASITLNRPYFIKGEIVHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            K GR +GFPTAN++ + DI+L K GVY    R  ++  Y G+ N G NPT V    + L
Sbjct: 196 RKFGRIMGFPTANLKYNKDIVLPKIGVYYTNVRVNNKI-YRGITNIGNNPT-VNGKEITL 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           E+ I DF  +IYG    V F   +R + KF  ++ L
Sbjct: 254 ETNILDFDNDIYGNTIEVHFIKKVRDQKKFNSVDDL 289


>gi|260905184|ref|ZP_05913506.1| FMN adenylyltransferase [Brevibacterium linens BL2]
          Length = 312

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 10/300 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G VV +GNFDG+H GH  +L+    +A    +    ++F+PHPRT+ +   P   ++   
Sbjct: 16  GTVVTLGNFDGVHRGHQTVLQAVAALARERSLRSVAMTFDPHPRTVHRPDEPTLMITSTE 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   +   G  AL    + L+ A  SAE+F++   VE L  + V+ G   RFGKD  G 
Sbjct: 76  QKADFIADTGIDALFVQHYDLDFAAQSAEEFVRTYFVEALGCEIVVVGDDVRFGKDNEGT 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  GEKYGF T  I+E+   +    SSS IR  +  G V  AA  LG    +E  V
Sbjct: 136 IETLRHLGEKYGFRTETIEEV--GRGGRYSSSRIREQIVAGDVAEAADQLGRYHRVEGTV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNG 254
           +HG+  GR LGFPTAN+    + L+  +GVYA      D+   Y    + G NPT     
Sbjct: 194 VHGDARGRDLGFPTANLSEDAEGLIPADGVYAGWATFSDEAQPYPAAISIGTNPTF-EGS 252

Query: 255 PLLLESFIFD--FSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E+ + D  F + ++Y +  ++ F   +R ++ F  +++L + M ED    R++L +
Sbjct: 253 VRRVEAHVLDKEFGEFDVYSRHMSLEFVSRIRGQVTFTGMDELVVKMHEDIADVREVLHT 312


>gi|78185068|ref|YP_377503.1| riboflavin kinase / FAD synthetase [Synechococcus sp. CC9902]
 gi|78169362|gb|ABB26459.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus sp.
           CC9902]
          Length = 320

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 157/296 (53%), Gaps = 7/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            +A+G+FDGIH GH  ++  A+   +    +  +V+SF PHPR ++   + +  L  P  
Sbjct: 25  ALALGSFDGIHAGHRAVIAAALDGLDPEIGAVPSVVSFWPHPREVLFGETRL-RLDLPQE 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L  +G   L+   FT E A  SAE+F   VL+E L+ K +  GT FRFG  RAGD 
Sbjct: 84  KLSLLGPLGIEQLVLVPFTKELAQLSAEEFADSVLLETLQAKRIAVGTNFRFGHRRAGDA 143

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +LQ+   + G     +D + +   ++ SSS IR+AL +G +  A  LLG  +  +  V+
Sbjct: 144 ELLQRLARRRGVDVRIVDIVEDADGRM-SSSRIRSALEQGALAQAEALLGRPYRFQGKVV 202

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGP 255
            G  +GR +G+PTAN+Q+     L   GVYA   +          V N G  PT+ PN P
Sbjct: 203 RGRGLGREIGWPTANLQVDGRKFLPGLGVYAAWVQLDGAGDVMPAVMNLGPQPTVDPNSP 262

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E  + D + E+  +   V     LR + KF  +++L   +G+D + AR++L++
Sbjct: 263 SAVEVHLLDRNLELDHRELVVEPVHRLRGQKKFNGLQELSAQIGDDAEAARQLLKN 318


>gi|229505698|ref|ZP_04395208.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae BX
           330286]
 gi|229508728|ref|ZP_04398221.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|229519522|ref|ZP_04408965.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC9]
 gi|229608717|ref|YP_002879365.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MJ-1236]
 gi|229344211|gb|EEO09186.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC9]
 gi|229354252|gb|EEO19182.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|229357921|gb|EEO22838.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae BX
           330286]
 gi|229371372|gb|ACQ61795.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MJ-1236]
          Length = 455

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII---QSSSPIFTLS 73
           G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P P  +    Q+ + +  L 
Sbjct: 149 GCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLR 208

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +Q   L K+G   L+   F    A   A  FI+ +LV  L VK ++ G  F FGK+R
Sbjct: 209 DKFVQ---LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKER 265

Query: 134 AGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G+  +LQ+ G+   F  V      + +LR      VSS+ IR AL    + +A+ +LG 
Sbjct: 266 QGNFALLQQAGQALDFEVVSTQSFCLQQLR------VSSTAIREALAADQLSSASAMLGR 319

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T   GVAN G  P
Sbjct: 320 HYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVANIGNRP 379

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T V      LE   FDF   +YG++  V+    LR E KF   E LK  +  D + AR  
Sbjct: 380 T-VDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVW 438

Query: 309 LE 310
           L 
Sbjct: 439 LR 440


>gi|317046854|ref|YP_004114502.1| riboflavin biosynthesis protein RibF [Pantoea sp. At-9b]
 gi|316948471|gb|ADU67946.1| riboflavin biosynthesis protein RibF [Pantoea sp. At-9b]
          Length = 312

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 154/306 (50%), Gaps = 4/306 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPI 69
           +L    +G V+ IGNFDG H GH  ++ + ++       P+ V+ F P P  +       
Sbjct: 9   NLTQQHRGCVLTIGNFDGFHRGHQALMAELVEEGRKRQLPVIVMLFEPQPLELFAGDKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     + K L++ G  A++  +F    A +SA+ FI ++LVE L VK +  G  FRF
Sbjct: 69  ARLMRLREKLKYLKQAGVDAVLCVRFDRRFAAHSAQSFISELLVEKLNVKFLAVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQK G +YGF  +      +   +I SS+ +R AL +   + A  LLG+ 
Sbjct: 129 GAGRQGDFLLLQKAGVEYGFDVISTQTFCDGGKRI-SSTAVRQALAQDDFVQAQTLLGHP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F+I   V+HG+ +GRT+GFPTAN+ L   +   +GV+A+      +    GVAN G  PT
Sbjct: 188 FSISGRVVHGDALGRTIGFPTANLPLRRTVTPVKGVFAVEVLGLGEQPIPGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            V      LE  + D    +YG+   V     +R E +F  ++ LK  + +D   AR+  
Sbjct: 248 -VKGLRQQLEVHLLDTHMNLYGRHIDVVLKQKIRDEQRFASLDALKEQIAKDVVTARQFF 306

Query: 310 ESSYPL 315
               P+
Sbjct: 307 GLKTPV 312


>gi|331082951|ref|ZP_08332071.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399946|gb|EGG79604.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 316

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 159/303 (52%), Gaps = 9/303 (2%)

Query: 16  HLKGGV---VAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           HL  G+   V +G FDG H GH  ++E    K   N    + +F+   +   Q   P   
Sbjct: 9   HLNSGIRSAVTLGKFDGFHRGHQKLVECIKQKSGENCRTIIFTFDLPYKAYQQKCMPKLL 68

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +E + E +    L    FT E  N   E F+++ LV+ L  + V  G+ F FG 
Sbjct: 69  LTYEEKRE-VAEALYADILAECPFTEELMNMEPEVFVKEYLVDRLHAEYVAIGSDFHFGH 127

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R+G+  +L   GEKYGF    I++ R+ + +I SS+ IR  L +G +     LLGY + 
Sbjct: 128 NRSGNPEVLSALGEKYGFTVEIIEKERDGEREI-SSTYIREELEQGRMEKVQKLLGYPYF 186

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           I+ +++HG ++GRT+G PTAN+   P   L   GVY  +     +  YSG+ N G  PT+
Sbjct: 187 IKGEIVHGRQLGRTIGVPTANLIPPPMKKLPPNGVYVTQSSVGGKV-YSGITNVGYKPTV 245

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             N  + +E+++F  ++++YGQ   V F+ YLRPE KF  + +LK  +  D + AR   E
Sbjct: 246 KENF-IGVETYLFHCNEDLYGQEAEVRFYKYLRPEKKFDSLSELKTQLDIDVETARAFFE 304

Query: 311 SSY 313
             Y
Sbjct: 305 KEY 307


>gi|256020135|ref|ZP_05434000.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           sp. D9]
 gi|332281290|ref|ZP_08393703.1| bifunctional riboflavin kinase/FAD synthetase [Shigella sp. D9]
 gi|332103642|gb|EGJ06988.1| bifunctional riboflavin kinase/FAD synthetase [Shigella sp. D9]
          Length = 313

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAGSLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|290957014|ref|YP_003488196.1| riboflavin kinase (FAD synthetase) [Streptomyces scabiei 87.22]
 gi|260646540|emb|CBG69637.1| putative riboflavin kinase (FAD synthetase) [Streptomyces scabiei
           87.22]
          Length = 317

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 9/311 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LIL  A++ A     P   ++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQLILRHAVERARERGVPAVAVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +  S   F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMADLGVDAVLVLPFTSEFSRLSPADFVVKVLVDKLHAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AGD   L + G+ Y F    +D     ++   Q  SS+  R  +T+G V  A  +
Sbjct: 128 FGHKAAGDVAYLVELGKTYDFEVEVVDLFVTGEAGGGQPFSSTLTRKLVTEGDVEGAREI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D  +     + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHV-DGEAMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  ++R + KF  ++ L + MGED K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHAAVDFLSFVRGQAKFDSLDALLVAMGEDVK 305

Query: 304 KARKILESSYP 314
           + R+++ S  P
Sbjct: 306 RCRELIGSYRP 316


>gi|238797504|ref|ZP_04641002.1| FMN adenylyltransferase [Yersinia mollaretii ATCC 43969]
 gi|238718645|gb|EEQ10463.1| FMN adenylyltransferase [Yersinia mollaretii ATCC 43969]
          Length = 295

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  ARYLADAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL   +++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDNLVLAEALLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+     D     GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLDPEPLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|170680169|ref|YP_001742140.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli SMS-3-5]
 gi|170517887|gb|ACB16065.1| riboflavin biosynthesis protein RibF [Escherichia coli SMS-3-5]
 gi|323964879|gb|EGB60346.1| riboflavin biosynthesis protein RibF [Escherichia coli M863]
 gi|323975808|gb|EGB70904.1| riboflavin biosynthesis protein RibF [Escherichia coli TW10509]
 gi|327254998|gb|EGE66601.1| riboflavin biosynthesis protein RibF [Escherichia coli STEC_7v]
          Length = 313

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGAEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|311085892|gb|ADP65974.1| FMN adenylyltransferase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 5   HNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           HNI EIN +        VV IGNFDGIHLGH  +     +I     ++  V+ F P P  
Sbjct: 8   HNIKEINSN-------SVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +K +
Sbjct: 61  FLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFI 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  R G+  +L+K G KY F+ + I  L  N  +I SS+NIR AL++ ++  
Sbjct: 121 VIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIKI-SSTNIRKALSENNIKL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +        G+
Sbjct: 180 ASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYAIGI 239

Query: 242 ANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  + +
Sbjct: 240 SNIGIKPSFFNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDERFFPSKKELKNQISQ 299

Query: 301 D 301
           D
Sbjct: 300 D 300


>gi|86742238|ref|YP_482638.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia sp.
           CcI3]
 gi|86569100|gb|ABD12909.1| FMN adenylyltransferase / riboflavin kinase [Frankia sp. CcI3]
          Length = 309

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 6/300 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++ P   +GGVV IG FDG+HLGH  I+ +A+++A        VL+F+PHP  +++  S 
Sbjct: 8   ENTPVQWRGGVVTIGFFDGVHLGHRQIIGRAVRLARERGERSLVLTFDPHPGEVLRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++L   G  AL    FTLE +  S   F+  +LVE L    V+ G  F 
Sbjct: 68  PALLTTLRFKAELLAGTGVDALCVEPFTLEFSRVSPADFVHGILVERLRASVVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G   AG    L + G + GF    +  +R+ + Q++SS+ IR  + +G V  AA  L  
Sbjct: 128 YGHRAAGTLATLSEAGAREGFEVDGVRLVRSGE-QVLSSTAIRARVAEGDVAAAAAALDR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
              +E  V+HG+  GRT+G+PTAN+Q++P   +  +GVYA  F            + G N
Sbjct: 187 PHRVEGVVVHGDARGRTIGYPTANIQVTPWAAVPADGVYA-GFACWSGRRQPAAISIGTN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+F+ DF +++YG+     F   LRP ++F  + +L   M  D +  R 
Sbjct: 246 PTF-EGRDRRVEAFLLDFDEDLYGEYMAYEFTHRLRPTLRFDSVAELVTQMAADVEATRA 304


>gi|170021616|ref|YP_001726570.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli ATCC 8739]
 gi|188495589|ref|ZP_03002859.1| riboflavin biosynthesis protein RibF [Escherichia coli 53638]
 gi|253774943|ref|YP_003037774.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160151|ref|YP_003043259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli B str. REL606]
 gi|297517215|ref|ZP_06935601.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli OP50]
 gi|300928680|ref|ZP_07144199.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 187-1]
 gi|169756544|gb|ACA79243.1| riboflavin biosynthesis protein RibF [Escherichia coli ATCC 8739]
 gi|188490788|gb|EDU65891.1| riboflavin biosynthesis protein RibF [Escherichia coli 53638]
 gi|242375865|emb|CAQ30545.1| bifunctional riboflavin kinase / FMN adenylyltransferase
           [Escherichia coli BL21(DE3)]
 gi|253325987|gb|ACT30589.1| riboflavin biosynthesis protein RibF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972052|gb|ACT37723.1| putative regulator [Escherichia coli B str. REL606]
 gi|253976261|gb|ACT41931.1| putative regulator [Escherichia coli BL21(DE3)]
 gi|300463349|gb|EFK26842.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 187-1]
 gi|323959972|gb|EGB55618.1| riboflavin biosynthesis protein RibF [Escherichia coli H489]
          Length = 313

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|33240796|ref|NP_875738.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
 gi|33238325|gb|AAQ00391.1| FAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 305

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 5/291 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  +++         P TV+SF PHPR ++   S +  L  PS +  
Sbjct: 15  ALALGSFDGLHAGHRSVIKTITSNTTAVP-TVVSFWPHPREVLYGESKL-RLYLPSEKAL 72

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE +G   L+   F L  A+ SA++F  ++L++ L+ K +  G  FRFGK+R GD   L
Sbjct: 73  LLEHLGVKQLVLVPFDLSLASLSADEFFHEILIKNLQAKQISVGANFRFGKNREGDSDKL 132

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            + GEK       ++ + +N+ ++ SSS IR AL  G +     LLG  ++    V+ G+
Sbjct: 133 IELGEKANIKVRVLEIIEDNQGRM-SSSRIREALKDGDIKLTNSLLGRAYSFGGKVVPGK 191

Query: 201 KIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYS-GVANFGRNPTMVPNGPLLL 258
            IGR LG+PTAN+++    LL  +GVYA+  R  D+ S+S  + N G  PT+ P+ P   
Sbjct: 192 GIGRKLGWPTANLEIDGSKLLPGQGVYAVMTRASDEKSFSPAIMNLGPQPTINPHAPSAT 251

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + +    + G+   V   + +R + KF  ++ L   +  D +KA  IL
Sbjct: 252 EVHVLNKQVNLKGKDLIVEPVERIRTQKKFTTLKDLSNQIELDARKAISIL 302


>gi|294789423|ref|ZP_06754660.1| riboflavin biosynthesis protein RibF [Simonsiella muelleri ATCC
           29453]
 gi|294482636|gb|EFG30326.1| riboflavin biosynthesis protein RibF [Simonsiella muelleri ATCC
           29453]
          Length = 307

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V IGNFDG+H GH  IL+   + A    +  T + F P P       SP + L+P 
Sbjct: 13  QGSAVTIGNFDGVHTGHLHILQTLKQQAEQRQLATTAIIFEPQPTEFFAQQSPPYRLTPL 72

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + ++L++ G    +   +FT   AN +A  FIQ +L+  L  + ++ G  FRFGK R 
Sbjct: 73  RDKIQLLQQSGCLKTVWVQRFTPNFANKTAHDFIQHILLGHLNTRYLLVGDDFRFGKARG 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVS-----SSNIRTALTKGHVLNAAHLLGYR 189
           GD  +LQ   +          E +N  S +VS     S+ +R AL  G +  A  +LG+ 
Sbjct: 133 GDFELLQSYSQF---------ETQNTPSVLVSGCRASSTAVRQALAAGDLRTATQILGHA 183

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +T+   V HG K+GRT+G PTAN+ L        GV+ +R  T     Y GVA+FG NPT
Sbjct: 184 YTLSGHVKHGAKLGRTIGCPTANVHLPKHSYALRGVFVVRVLTAF-GKYHGVASFGVNPT 242

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +       LE  +FD+S  +YG+R  V F   LR E KF D+  L+  + +D   A+  L
Sbjct: 243 VSNTLTPKLEVHLFDYSGNLYGERIDVQFLHKLRDEEKFADLTTLQQQIQQDMLDAQTWL 302

Query: 310 ES 311
            +
Sbjct: 303 AN 304


>gi|258516327|ref|YP_003192549.1| riboflavin biosynthesis protein RibF [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780032|gb|ACV63926.1| riboflavin biosynthesis protein RibF [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 311

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 8/290 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ-SSSPIFTLSPPSIQ 78
           + +GNFDGIH+GH  ++   + +A        V++F PHP  ++Q + +P+  LS  + Q
Sbjct: 20  LGLGNFDGIHIGHQKLISDLVDVARQRGGVPAVMTFYPHPLAVLQPAEAPLMLLSQTNKQ 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E  +E +G   L+   F  + A  + + FI+ +L   L VK V  G  + FG    G   
Sbjct: 80  E-FMEGLGVEVLLVMPFDRDFACLAPDTFIKDILYGELGVKGVFVGYNYTFGCRGLGTPD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  G  YGF    +  +   + Q+V+S+ IR  + KG V NAA  LGY   I+ +V++
Sbjct: 139 LLKSYGGTYGFDVHVVPPVCVGE-QVVNSTLIRGLIEKGEVGNAAKFLGYVPFIQGEVVY 197

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVP-NGPL 256
           GE+ G TLGFPTAN++L  D+++ + GVYA+         Y  VAN G  PT     G  
Sbjct: 198 GERRGNTLGFPTANLELDSDLVVPDNGVYAVHVEL-GGCKYPAVANIGTKPTFHGFAGAR 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LE  + DFS ++YGQ   VSF   LR E +F  + +L   +  D  +AR
Sbjct: 257 CLEVHLLDFSADLYGQTIKVSFIRRLRGEKRFNSVGELVAQIKTDIGEAR 306


>gi|238764640|ref|ZP_04625585.1| FMN adenylyltransferase [Yersinia kristensenii ATCC 33638]
 gi|238697132|gb|EEP89904.1| FMN adenylyltransferase [Yersinia kristensenii ATCC 33638]
          Length = 295

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   L+  KF    A  +A+ F+ K+LVE L VK +  G  FRFG +R GD  
Sbjct: 61  ARYLAEAGVDYLLCVKFDPRFAAITAQAFVAKLLVEKLGVKFLTVGDDFRFGAERQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDDLVLAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDITMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIAHDVVTARTFFGLKTPV 295


>gi|70732627|ref|YP_262390.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens Pf-5]
 gi|68346926|gb|AAY94532.1| riboflavin biosynthesis protein RibF [Pseudomonas fluorescens Pf-5]
          Length = 314

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 154/301 (51%), Gaps = 24/301 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PQH-RGCVATIGNFDGVHRGHQAILGRLRERALELG--VPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F    +  SA +F++++LV+ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLQLLADAGVDRVLCLAFNQRLSKLSASEFVERILVDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  +GF      TV +D LR      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGCDRVGDFDFLQQAGATHGFTVEAAQTVELDGLR------VSSTQVRNAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  LLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AAADFDLAERLLGRPYRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSVEL-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E L
Sbjct: 232 GRTWPGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHHKLREEQRFASLEAL 291

Query: 295 K 295
           K
Sbjct: 292 K 292


>gi|283783804|ref|YP_003363669.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
 gi|282947258|emb|CBG86803.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
          Length = 312

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQSLQEEGRRRGLPVMVMIFEPQPLELFATDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ FI  +LV+ L V+ +  G  FRFG  R GD
Sbjct: 76  EKLRYLAQCGVDYVLCVRFDRRFAALTAQTFISDLLVDRLGVRFLAVGDDFRFGAGRTGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI   V
Sbjct: 136 FLLLQKAGAEYGFAVTNTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANIPLRRQVSPVKGVYAVEVMGAGEQPMPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR     S P
Sbjct: 254 QLEVHVLDVVMDLYGRHIDVVLRKKIRNEQRFASLDELKAQIARDELTARDFFGLSKP 311


>gi|2500205|sp|P73651|RIBF_SYNY3 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1652777|dbj|BAA17696.1| slr1882 [Synechocystis sp. PCC 6803]
          Length = 284

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 144/263 (54%), Gaps = 9/263 (3%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            V+SFNPHPR+     + P+ T  P    +  L  +G   L+   FT + AN S +QF+Q
Sbjct: 20  AVVSFNPHPRSFFSGRTQPLLTPLPEKAAQ--LTAIGIEQLVLLPFTEKLANLSPKQFVQ 77

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +LVE L+ K +  G  F FG  R G+   LQ  G+++G  TV I +L    ++ +SSS 
Sbjct: 78  SILVEQLQAKFISVGQDFCFGHQRRGNVQDLQNLGQEFGI-TVAIAQLEQTDTERISSSR 136

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYA- 227
           IR AL +G +  A HLLG  + +   V+ G+++GR LGFPTAN+ L  D L  K GVYA 
Sbjct: 137 IRRALKEGKLAMANHLLGRPYALRGTVVQGQQLGRKLGFPTANLCLPADKLWPKYGVYAG 196

Query: 228 -IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
            +     D      V N G  PT+    P   E  +  +S ++YGQ   V+   YLRPE 
Sbjct: 197 WVNLNALD-VPIPAVINLGDRPTVNGQEP-SAEVHLLQWSGDLYGQGLEVALTHYLRPET 254

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
           KF  +++LK  + +D ++A K+L
Sbjct: 255 KFAGLDQLKNQIAQDCQQAEKLL 277


>gi|195953646|ref|YP_002121936.1| riboflavin biosynthesis protein RibF [Hydrogenobaculum sp. Y04AAS1]
 gi|195933258|gb|ACG57958.1| riboflavin biosynthesis protein RibF [Hydrogenobaculum sp. Y04AAS1]
          Length = 296

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 8/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+GNFDG+HLGH  +L   +  A    +  +VL F+PHP  +++  S    +     ++
Sbjct: 8   LAVGNFDGVHLGHQHLLNTLVSKAKEKNLVPSVLMFDPHPLEVLEKESAPCIIYTIEERK 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + + K+G   +    FT E +N SA  FI+  + E L  K +I G  +R+G  R G+  +
Sbjct: 68  EYIYKLGVENIFVINFTKEFSNISARDFIKDYVYEKLNTKLLIVGYDWRYGAKREGEFEL 127

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            ++ GE +GF  V   E       IVSS+ IR  L +    +    LG  +TI+  V+ G
Sbjct: 128 AKEMGEMFGFE-VIPSEPYKVDGHIVSSTLIRRLLKEAKFEDVKKYLGREYTIKRRVVRG 186

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G  +GFPTAN+  + ++ LKEGVY ++        Y GVAN+G+ PT+      +LE
Sbjct: 187 KGLGSKIGFPTANISNTSNMCLKEGVYVVKV-----NGYLGVANYGKRPTVEYTNQNILE 241

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             I DF   +     +++F  +LR E KF  IE LK+ +  D + A+ +  +
Sbjct: 242 VHIIDFKGNLTDNILSITFLGFLREEKKFNSIEDLKVQIKTDIETAKSLFSN 293


>gi|213426563|ref|ZP_03359313.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
          Length = 303

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 8/292 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTAR 303


>gi|326692680|ref|ZP_08229685.1| riboflavin biosynthesis protein RibF [Leuconostoc argentinum KCTC
           3773]
          Length = 306

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 163/298 (54%), Gaps = 13/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VV +G FDG+HLGH  +++ A   A+    P+ VL+++PHP  + ++ + P+  L+P   
Sbjct: 11  VVTMGFFDGVHLGHQAVIQAAKAEADRLGVPLAVLTYDPHPVVVFKTLTHPLHYLTPLDQ 70

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR--AG 135
           +  + E++G   +   +FT + A  + +QF+ +VL+  L+  TV+ G    +G DR  A 
Sbjct: 71  KVALFEELGVDRVYVMRFTSQLAQLAPQQFVDEVLLP-LQPTTVVAGFDHLYGGDRQTAN 129

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            + + Q    ++   TV   E  N K   V SS IR AL  G +    H LG  +     
Sbjct: 130 MQVLDQYAANRFDVITVPPFEEANQK---VGSSAIRRALDAGDMQTVNHQLGRVYQTTGT 186

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HGE  GR LGFPTAN+Q +P++  L   GVY +  +   Q  Y G+A+ GRN T    
Sbjct: 187 VVHGEARGRELGFPTANIQ-TPELEWLPGIGVYVVGIQIAGQ-WYQGMASIGRNITFGDM 244

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            P+ +E  I DF Q+IYG+  TV+++ YLR E+KF  +  L   +  DE+  R+  ++
Sbjct: 245 RPITVEINILDFKQQIYGEAVTVAWYYYLRGEVKFTSVPDLITQLQHDEQATRQYFKA 302


>gi|15799707|ref|NP_285719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 EDL933]
 gi|15829282|ref|NP_308055.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. Sakai]
 gi|16128019|ref|NP_414566.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           str. K-12 substr. MG1655]
 gi|24111470|ref|NP_705980.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2a str. 301]
 gi|26245946|ref|NP_751985.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli CFT073]
 gi|30061593|ref|NP_835764.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2a str. 2457T]
 gi|74310643|ref|YP_309062.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           sonnei Ss046]
 gi|89106909|ref|AP_000689.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. W3110]
 gi|91209082|ref|YP_539068.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UTI89]
 gi|110640236|ref|YP_667964.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 536]
 gi|110804092|ref|YP_687612.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 5 str. 8401]
 gi|117622314|ref|YP_851227.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli APEC O1]
 gi|157156528|ref|YP_001461193.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli E24377A]
 gi|157159492|ref|YP_001456810.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli HS]
 gi|168756849|ref|ZP_02781856.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762786|ref|ZP_02787793.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766713|ref|ZP_02791720.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776941|ref|ZP_02801948.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781722|ref|ZP_02806729.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785076|ref|ZP_02810083.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC869]
 gi|170079688|ref|YP_001729008.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|187730272|ref|YP_001878849.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii CDC 3083-94]
 gi|191168890|ref|ZP_03030661.1| riboflavin biosynthesis protein RibF [Escherichia coli B7A]
 gi|191174126|ref|ZP_03035640.1| riboflavin biosynthesis protein RibF [Escherichia coli F11]
 gi|193066222|ref|ZP_03047275.1| riboflavin biosynthesis protein RibF [Escherichia coli E22]
 gi|193070963|ref|ZP_03051892.1| riboflavin biosynthesis protein RibF [Escherichia coli E110019]
 gi|194434566|ref|ZP_03066824.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1012]
 gi|195937698|ref|ZP_03083080.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. EC4024]
 gi|208805836|ref|ZP_03248173.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4206]
 gi|208811843|ref|ZP_03253172.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821743|ref|ZP_03262063.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396939|ref|YP_002268631.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917214|ref|YP_002291298.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli SE11]
 gi|217326317|ref|ZP_03442401.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           TW14588]
 gi|218547458|ref|YP_002381249.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           fergusonii ATCC 35469]
 gi|218552609|ref|YP_002385522.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli IAI1]
 gi|218556962|ref|YP_002389875.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli S88]
 gi|218687899|ref|YP_002396111.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli ED1a]
 gi|218693496|ref|YP_002401163.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 55989]
 gi|218698445|ref|YP_002406074.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli IAI39]
 gi|218703285|ref|YP_002410804.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UMN026]
 gi|227885081|ref|ZP_04002886.1| FAD synthetase [Escherichia coli 83972]
 gi|237704164|ref|ZP_04534645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|238899430|ref|YP_002925226.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           BW2952]
 gi|254037440|ref|ZP_04871517.1| riboflavin biosynthesis protein RibF [Escherichia sp. 1_1_43]
 gi|254791160|ref|YP_003075997.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|260842262|ref|YP_003220040.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O103:H2 str. 12009]
 gi|260866175|ref|YP_003232577.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O111:H- str. 11128]
 gi|261226783|ref|ZP_05941064.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255186|ref|ZP_05947719.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291280848|ref|YP_003497666.1| riboflavin biosynthesis protein RibF [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403098|ref|ZP_06647195.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli FVEC1412]
 gi|293408116|ref|ZP_06651956.1| riboflavin biosynthesis protein RibF [Escherichia coli B354]
 gi|293476687|ref|ZP_06665095.1| riboflavin biosynthesis protein RibF [Escherichia coli B088]
 gi|298378625|ref|ZP_06988509.1| riboflavin biosynthesis protein ribF [Escherichia coli FVEC1302]
 gi|300816057|ref|ZP_07096280.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 107-1]
 gi|300821973|ref|ZP_07102117.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 119-7]
 gi|300896788|ref|ZP_07115292.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 198-1]
 gi|300905425|ref|ZP_07123192.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 84-1]
 gi|300919574|ref|ZP_07136066.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 115-1]
 gi|300924029|ref|ZP_07140029.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 182-1]
 gi|300939435|ref|ZP_07154097.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 21-1]
 gi|300980954|ref|ZP_07175268.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 45-1]
 gi|300984126|ref|ZP_07176877.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 200-1]
 gi|301019793|ref|ZP_07183937.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 69-1]
 gi|301048403|ref|ZP_07195430.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 185-1]
 gi|301303539|ref|ZP_07209662.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 124-1]
 gi|301330212|ref|ZP_07222872.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 78-1]
 gi|301648411|ref|ZP_07248147.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 146-1]
 gi|306815378|ref|ZP_07449527.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli NC101]
 gi|307136627|ref|ZP_07495983.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli H736]
 gi|307311522|ref|ZP_07591164.1| riboflavin biosynthesis protein RibF [Escherichia coli W]
 gi|309797790|ref|ZP_07692174.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 145-7]
 gi|312970117|ref|ZP_07784299.1| riboflavin biosynthesis protein RibF [Escherichia coli 1827-70]
 gi|331640472|ref|ZP_08341620.1| riboflavin biosynthesis protein RibF [Escherichia coli H736]
 gi|331650914|ref|ZP_08351942.1| riboflavin biosynthesis protein RibF [Escherichia coli M718]
 gi|331661060|ref|ZP_08361992.1| riboflavin biosynthesis protein RibF [Escherichia coli TA206]
 gi|331666257|ref|ZP_08367138.1| riboflavin biosynthesis protein RibF [Escherichia coli TA271]
 gi|331671543|ref|ZP_08372341.1| riboflavin biosynthesis protein RibF [Escherichia coli TA280]
 gi|331680593|ref|ZP_08381252.1| riboflavin biosynthesis protein RibF [Escherichia coli H591]
 gi|331681406|ref|ZP_08382043.1| riboflavin biosynthesis protein RibF [Escherichia coli H299]
 gi|84027894|sp|P0AG42|RIBF_ECO57 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027895|sp|P0AG41|RIBF_ECOL6 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027896|sp|P0AG40|RIBF_ECOLI RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027897|sp|P0AG43|RIBF_SHIFL RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|12512708|gb|AAG54327.1|AE005179_4 putative regulator [Escherichia coli O157:H7 str. EDL933]
 gi|26106343|gb|AAN78529.1|AE016755_29 Riboflavin biosynthesis protein ribF [Escherichia coli CFT073]
 gi|1786208|gb|AAC73136.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13359484|dbj|BAB33451.1| putative regulator [Escherichia coli O157:H7 str. Sakai]
 gi|24050220|gb|AAN41687.1| putative regulator [Shigella flexneri 2a str. 301]
 gi|30039835|gb|AAP15569.1| putative regulator [Shigella flexneri 2a str. 2457T]
 gi|73854120|gb|AAZ86827.1| putative regulator [Shigella sonnei Ss046]
 gi|85674289|dbj|BAB96594.2| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K12 substr. W3110]
 gi|91070656|gb|ABE05537.1| riboflavin biosynthesis protein RibF; riboflavin kinase
           (flavokinase) [Escherichia coli UTI89]
 gi|110341828|gb|ABG68065.1| riboflavin kinase [Escherichia coli 536]
 gi|110613640|gb|ABF02307.1| putative regulator [Shigella flexneri 5 str. 8401]
 gi|115511438|gb|ABI99512.1| putative regulator [Escherichia coli APEC O1]
 gi|157065172|gb|ABV04427.1| riboflavin biosynthesis protein RibF [Escherichia coli HS]
 gi|157078558|gb|ABV18266.1| riboflavin biosynthesis protein RibF [Escherichia coli E24377A]
 gi|169887523|gb|ACB01230.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|187427264|gb|ACD06538.1| riboflavin biosynthesis protein RibF [Shigella boydii CDC 3083-94]
 gi|187767716|gb|EDU31560.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4196]
 gi|189000749|gb|EDU69735.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356106|gb|EDU74525.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364126|gb|EDU82545.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366968|gb|EDU85384.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374979|gb|EDU93395.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC869]
 gi|190901056|gb|EDV60834.1| riboflavin biosynthesis protein RibF [Escherichia coli B7A]
 gi|190905620|gb|EDV65245.1| riboflavin biosynthesis protein RibF [Escherichia coli F11]
 gi|192926147|gb|EDV80788.1| riboflavin biosynthesis protein RibF [Escherichia coli E22]
 gi|192955693|gb|EDV86167.1| riboflavin biosynthesis protein RibF [Escherichia coli E110019]
 gi|194417219|gb|EDX33330.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1012]
 gi|208725637|gb|EDZ75238.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733120|gb|EDZ81807.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741866|gb|EDZ89548.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158339|gb|ACI35772.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747124|gb|ACI71869.1| putative regulator [Escherichia coli]
 gi|209747126|gb|ACI71870.1| putative regulator [Escherichia coli]
 gi|209747128|gb|ACI71871.1| putative regulator [Escherichia coli]
 gi|209747130|gb|ACI71872.1| putative regulator [Escherichia coli]
 gi|209747132|gb|ACI71873.1| putative regulator [Escherichia coli]
 gi|209910473|dbj|BAG75547.1| flavokinase and FAD synthase [Escherichia coli SE11]
 gi|217322538|gb|EEC30962.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350228|emb|CAU95911.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           55989]
 gi|218354999|emb|CAQ87605.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia
           fergusonii ATCC 35469]
 gi|218359377|emb|CAQ96916.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           IAI1]
 gi|218363731|emb|CAR01391.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           S88]
 gi|218368431|emb|CAR16167.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           IAI39]
 gi|218425463|emb|CAR06245.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           ED1a]
 gi|218430382|emb|CAR11249.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           UMN026]
 gi|222031856|emb|CAP74594.1| riboflavin biosynthesis protein ribF [Escherichia coli LF82]
 gi|226840546|gb|EEH72548.1| riboflavin biosynthesis protein RibF [Escherichia sp. 1_1_43]
 gi|226902076|gb|EEH88335.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|227837910|gb|EEJ48376.1| FAD synthetase [Escherichia coli 83972]
 gi|238860084|gb|ACR62082.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           BW2952]
 gi|254590560|gb|ACT69921.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O157:H7 str. TW14359]
 gi|257757409|dbj|BAI28906.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O103:H2 str. 12009]
 gi|257762531|dbj|BAI34026.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O111:H- str. 11128]
 gi|260450766|gb|ACX41188.1| riboflavin biosynthesis protein RibF [Escherichia coli DH1]
 gi|281177236|dbj|BAI53566.1| flavokinase and FAD synthetase [Escherichia coli SE15]
 gi|281599386|gb|ADA72370.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2002017]
 gi|284919806|emb|CBG32861.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Escherichia coli 042]
 gi|290760721|gb|ADD54682.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase)] [Escherichia coli O55:H7 str. CB9615]
 gi|291321140|gb|EFE60582.1| riboflavin biosynthesis protein RibF [Escherichia coli B088]
 gi|291430013|gb|EFF03027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli FVEC1412]
 gi|291472367|gb|EFF14849.1| riboflavin biosynthesis protein RibF [Escherichia coli B354]
 gi|294493301|gb|ADE92057.1| riboflavin biosynthesis protein RibF [Escherichia coli IHE3034]
 gi|298280959|gb|EFI22460.1| riboflavin biosynthesis protein ribF [Escherichia coli FVEC1302]
 gi|300299696|gb|EFJ56081.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 185-1]
 gi|300306751|gb|EFJ61271.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 200-1]
 gi|300359378|gb|EFJ75248.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 198-1]
 gi|300399080|gb|EFJ82618.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 69-1]
 gi|300402703|gb|EFJ86241.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 84-1]
 gi|300409111|gb|EFJ92649.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 45-1]
 gi|300413320|gb|EFJ96630.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 115-1]
 gi|300419753|gb|EFK03064.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 182-1]
 gi|300455656|gb|EFK19149.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 21-1]
 gi|300525573|gb|EFK46642.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 119-7]
 gi|300531264|gb|EFK52326.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 107-1]
 gi|300841266|gb|EFK69026.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 124-1]
 gi|300843774|gb|EFK71534.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 78-1]
 gi|301073546|gb|EFK88352.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 146-1]
 gi|305851040|gb|EFM51495.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli NC101]
 gi|306908501|gb|EFN38999.1| riboflavin biosynthesis protein RibF [Escherichia coli W]
 gi|307551866|gb|ADN44641.1| riboflavin biosynthesis protein RibF [Escherichia coli ABU 83972]
 gi|307629596|gb|ADN73900.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UM146]
 gi|308118619|gb|EFO55881.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 145-7]
 gi|310337615|gb|EFQ02726.1| riboflavin biosynthesis protein RibF [Escherichia coli 1827-70]
 gi|312944628|gb|ADR25455.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|313646600|gb|EFS11061.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2a str.
           2457T]
 gi|315059250|gb|ADT73577.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli W]
 gi|315134719|dbj|BAJ41878.1| bifunctional riboflavin kinase -!- FAD synthetase [Escherichia coli
           DH1]
 gi|315255703|gb|EFU35671.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 85-1]
 gi|315285015|gb|EFU44460.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 110-3]
 gi|315293406|gb|EFU52758.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 153-1]
 gi|315298461|gb|EFU57716.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 16-3]
 gi|315616200|gb|EFU96819.1| riboflavin biosynthesis protein RibF [Escherichia coli 3431]
 gi|320173363|gb|EFW48565.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           dysenteriae CDC 74-1112]
 gi|320642065|gb|EFX11416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. G5101]
 gi|320647428|gb|EFX16223.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H- str. 493-89]
 gi|320652762|gb|EFX21000.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H- str. H 2687]
 gi|320658151|gb|EFX25880.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320663460|gb|EFX30744.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320668772|gb|EFX35567.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323176330|gb|EFZ61922.1| riboflavin biosynthesis protein RibF [Escherichia coli 1180]
 gi|323181719|gb|EFZ67132.1| riboflavin biosynthesis protein RibF [Escherichia coli 1357]
 gi|323380193|gb|ADX52461.1| riboflavin biosynthesis protein RibF [Escherichia coli KO11]
 gi|323935076|gb|EGB31443.1| riboflavin biosynthesis protein RibF [Escherichia coli E1520]
 gi|323939756|gb|EGB35958.1| riboflavin biosynthesis protein RibF [Escherichia coli E482]
 gi|323945762|gb|EGB41809.1| riboflavin biosynthesis protein RibF [Escherichia coli H120]
 gi|323950487|gb|EGB46365.1| riboflavin biosynthesis protein RibF [Escherichia coli H252]
 gi|323955219|gb|EGB50992.1| riboflavin biosynthesis protein RibF [Escherichia coli H263]
 gi|324008366|gb|EGB77585.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 57-2]
 gi|324012344|gb|EGB81563.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 60-1]
 gi|324017710|gb|EGB86929.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 117-3]
 gi|324118376|gb|EGC12270.1| riboflavin biosynthesis protein RibF [Escherichia coli E1167]
 gi|325495942|gb|EGC93801.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           fergusonii ECD227]
 gi|326346888|gb|EGD70622.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. 1044]
 gi|331040218|gb|EGI12425.1| riboflavin biosynthesis protein RibF [Escherichia coli H736]
 gi|331051368|gb|EGI23417.1| riboflavin biosynthesis protein RibF [Escherichia coli M718]
 gi|331052102|gb|EGI24141.1| riboflavin biosynthesis protein RibF [Escherichia coli TA206]
 gi|331066468|gb|EGI38345.1| riboflavin biosynthesis protein RibF [Escherichia coli TA271]
 gi|331071388|gb|EGI42745.1| riboflavin biosynthesis protein RibF [Escherichia coli TA280]
 gi|331072056|gb|EGI43392.1| riboflavin biosynthesis protein RibF [Escherichia coli H591]
 gi|331081627|gb|EGI52788.1| riboflavin biosynthesis protein RibF [Escherichia coli H299]
 gi|332762584|gb|EGJ92849.1| riboflavin biosynthesis protein RibF [Shigella flexneri 4343-70]
 gi|332768812|gb|EGJ98991.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2930-71]
          Length = 313

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|224369790|ref|YP_002603954.1| RibF [Desulfobacterium autotrophicum HRM2]
 gi|223692507|gb|ACN15790.1| RibF [Desulfobacterium autotrophicum HRM2]
          Length = 309

 Score =  161 bits (408), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 166/298 (55%), Gaps = 14/298 (4%)

Query: 20  GVVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFNPHPRTII-QSSSPIFTLSP 74
            V+ IGNFDG+H GH    H ++E+A +I   S   V++F+PHP  ++  +  P+ T   
Sbjct: 17  AVITIGNFDGVHKGHQAIFHQVIEKAEEIGGTS--VVMTFDPHPLKVLGHNGPPLITRKD 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             I+  ++   G   ++   FT E A  SA++FI+ +L+  L +K ++ G  + FG++R 
Sbjct: 75  QKIE--LISATGIDKILCLPFTREFAAISAQEFIKDLLINQLGMKAIVVGLDYSFGRNRE 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           G+  ++QK G++ GF  +  D + + +  S+ +SS+ IR  + +G V      LG  + I
Sbjct: 133 GNLELMQKAGKQLGFEVLIADWINDTETGSERISSTRIRELVMEGRVDETPKFLGRFYQI 192

Query: 193 ESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
              V+ G ++ G  LGFPTAN++L  ++  K GVYA+   TQ    + GVAN G +PT  
Sbjct: 193 RGKVVKGRQRGGSKLGFPTANIKLHDELSPKMGVYAVTVETQ-TGKFKGVANIGYSPTF- 250

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +    +E  + DF+ ++Y  R  ++    LR E KF ++E+L   +  D + AR+IL
Sbjct: 251 DDHIFTIEVHLLDFAGDLYNTRIRINMIKRLRDEKKFSNLEELSNQIRNDIQLAREIL 308


>gi|305665466|ref|YP_003861753.1| Riboflavin kinase / FAD synthetase [Maribacter sp. HTCC2170]
 gi|88710222|gb|EAR02454.1| Riboflavin kinase / FAD synthetase [Maribacter sp. HTCC2170]
          Length = 308

 Score =  161 bits (408), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 162/295 (54%), Gaps = 11/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IG FDG+H+GH  IL++ IK AN+  +  TVL+F PHPR ++Q  S I  L+    +
Sbjct: 17  AITIGTFDGVHIGHQKILKKLIKKANSKKLKSTVLTFFPHPRMVLQKDSDIKLLNTLDEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KILE +G   LI + FT E +  SA +F++ +LV  L+ K +I G   RFG++R  +  
Sbjct: 77  IKILEGLGLDILIIHPFTKEFSRLSATEFVRDILVNALQAKKIIIGYDHRFGRNREANIN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            L   G    F    +DE+   +     VSS+ IR +L +G +  A   LGY + +   V
Sbjct: 137 DLIAFGSSLDFK---VDEISAQEIDEVSVSSTKIRKSLEEGKIETANKYLGYPYMLTGSV 193

Query: 197 IHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
             G+ +GR + FPTAN+ +  S  ++ K GVY ++    D T+ SG+ N G NPT V   
Sbjct: 194 KKGKGLGRQIQFPTANLHIEESYKLIPKNGVYVVQ-TVIDGTTVSGMMNIGYNPT-VSGK 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E   FD  +++YGQ+  +     +R E KF+ IE LK  + +D+  +  IL
Sbjct: 252 KKSIEIHFFDIDKDLYGQKLQIDLITRIRDEYKFESIEALKNQLAKDKDTSLAIL 306


>gi|289643640|ref|ZP_06475753.1| riboflavin biosynthesis protein RibF [Frankia symbiont of Datisca
           glomerata]
 gi|289506531|gb|EFD27517.1| riboflavin biosynthesis protein RibF [Frankia symbiont of Datisca
           glomerata]
          Length = 308

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 159/307 (51%), Gaps = 6/307 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           ++ P+   GGVV IG FDG+H GH  I+ +A++    +  P+ VL+F+PHP  +I   S 
Sbjct: 2   RNTPDDWPGGVVTIGFFDGVHRGHQQIITRAVERGRQAGEPVLVLTFDPHPAEVISPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+ P  + ++L ++G  A+  + FT E +  SA  F+  +L   L    V+ G  F 
Sbjct: 62  PPLLTTPDFKIELLGRLGVDAVCVHSFTPEFSLVSAADFVHDMLRPRLRPSVVVVGENFT 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G    G+   L++ GE  GF    +  +R +   ++SS++IR  + +G V  AA  LG 
Sbjct: 122 YGHRAEGNLESLRRAGETEGFAVEGVRLVRED-DHVLSSTHIRARIAEGDVATAARALGR 180

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              IE  V+HG+  GRT+G+PTAN+  +    +  +GVYA       +   + + + G N
Sbjct: 181 DHRIEGIVVHGDARGRTIGYPTANLLTTRYAAIPADGVYAGYVLRAAERCPAAI-SIGTN 239

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+++ DF  ++YG +    F + LRP ++F  +  L   M  D    RK
Sbjct: 240 PTF-DGADRRVEAYLLDFEGDLYGAQLAFEFTERLRPTLRFDSVGDLITQMAADVTATRK 298

Query: 308 ILESSYP 314
           I  ++ P
Sbjct: 299 ITAAAGP 305


>gi|153814914|ref|ZP_01967582.1| hypothetical protein RUMTOR_01129 [Ruminococcus torques ATCC 27756]
 gi|317500426|ref|ZP_07958650.1| hypothetical protein HMPREF1026_00593 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089567|ref|ZP_08338466.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847945|gb|EDK24863.1| hypothetical protein RUMTOR_01129 [Ruminococcus torques ATCC 27756]
 gi|316898181|gb|EFV20228.1| hypothetical protein HMPREF1026_00593 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330404935|gb|EGG84473.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 300

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 15/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQE 79
            + +G FDG+H GH  ++++    +  +  +VL +F+ H  +++             ++ 
Sbjct: 17  ALTLGKFDGLHKGHQKLIDKICAYSGENCKSVLCAFDMHRESLMTKQE-----RRSHLEG 71

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           KI        LI Y FT E     AE FI+ +L E L    ++ GT F FG ++ G+  +
Sbjct: 72  KI------DCLIEYPFTKELREMEAEVFIKNILCEKLHAAHIVVGTDFAFGHEKRGNTEM 125

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+   EK G+    I++ R ++  ++SS+ IR  L++G+V  AA LLGYR+ +   V HG
Sbjct: 126 LKMFSEKGGYTLDVIEKERYDQI-VISSTYIRDVLSQGNVTLAAELLGYRYGVTGIVRHG 184

Query: 200 EKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            ++GRTLGFPT N++     IL + GVY  R    D   Y+G+ N G  PT+      L+
Sbjct: 185 RQLGRTLGFPTMNVEPEEKKILPRFGVYVCRINI-DGKWYNGIGNVGVKPTVTEEHKRLV 243

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           E F++D+  + YG+  TV F D+ RPEI+F  + +LK  + +D +  +   ++S
Sbjct: 244 EVFVYDYEGDAYGKEITVEFCDFERPEIRFSSVNELKKQVAKDLRYGKDYFKAS 297


>gi|332830218|gb|EGK02846.1| riboflavin biosynthesis protein RibF [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  + A     P  V++F  HPR ++Q       L     +
Sbjct: 16  VATIGFFDGVHTGHRFLIDQVKEEAAKRGLPSAVITFPVHPRKVLQKDYQPALLCGFDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G    +   FT E +  SA +F++ +L + L V T++ G   RFG +R     
Sbjct: 76  TERLATTGVDYCVCLDFTTEISQLSAREFMKDILKDKLSVNTLVIGYDHRFGHNREDGFA 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++ G + G + +   EL   +   VSSS IR  L +G++  AA LL Y +TI   ++ 
Sbjct: 136 DYKRYGSEIGINVIEARELPGEEH--VSSSRIRKLLAEGYIRKAAKLLSYNYTISGKIVE 193

Query: 199 GEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRT+GFPTAN+Q+  +  ++   GVYA+    + Q  Y G+   G+ PT+     +
Sbjct: 194 GFKVGRTIGFPTANIQVWETYKVIPAFGVYAVYVHVEGQ-RYDGMLYIGKRPTLHNGDNI 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E  +F+F  ++Y +  T  F D++RP+ KF DI+ LK  +G D+     ++E+
Sbjct: 253 SIEVNLFNFDGDLYNKNLTAEFIDFVRPDEKFIDIDTLKKQIGNDKDTVISVIEN 307


>gi|320157350|ref|YP_004189729.1| riboflavin kinase/FMN adenylyltransferase [Vibrio vulnificus
           MO6-24/O]
 gi|319932662|gb|ADV87526.1| riboflavin kinase / FMN adenylyltransferase [Vibrio vulnificus
           MO6-24/O]
          Length = 293

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 150/293 (51%), Gaps = 16/293 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+HLGH  +L Q    A     P  V++F P P  +         L+    + 
Sbjct: 1   MTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQPLELFAKEKAPARLTRLRDKF 60

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L K+    L+   F    A+  A+ FI+ +LVE L VK ++ G  F FGK R G+  +
Sbjct: 61  VQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGVKFLVVGDDFCFGKARQGNFAM 120

Query: 140 LQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           LQ+ G+KYGF  V      + +LR      VSS+ IR AL    +  AA +LG  ++I  
Sbjct: 121 LQEAGKKYGFTVVNTQSFCLAQLR------VSSTAIREALAHDQLAVAAQMLGRDYSISG 174

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V HG K+GRT+GFPTAN+ L   +    GVY ++    D     GVAN G+ PT+  NG
Sbjct: 175 RVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKPIGGVANIGQRPTV--NG 232

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               LE  +FDF   +YG++  V     LR E KF+  + LK  +  D + AR
Sbjct: 233 VRQQLEVHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQQIELDAEAAR 285


>gi|311087046|gb|ADP67126.1| FMN adenylyltransferase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087606|gb|ADP67685.1| FMN adenylyltransferase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 5   HNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           HNI EIN +        VV IGNFDGIHLGH  +     +I     ++  V+ F P P  
Sbjct: 8   HNIKEINSN-------SVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +K +
Sbjct: 61  FLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFI 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  R G+  +L+K G KY F+ + I  L  N  +I SS+NIR AL++ ++  
Sbjct: 121 VIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIKI-SSTNIRKALSENNIKL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +        G+
Sbjct: 180 ASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYAIGI 239

Query: 242 ANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  + +
Sbjct: 240 SNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDEQFFPSKKELKNQISQ 299

Query: 301 D 301
           D
Sbjct: 300 D 300


>gi|117925438|ref|YP_866055.1| riboflavin kinase / FMN adenylyltransferase [Magnetococcus sp.
           MC-1]
 gi|117609194|gb|ABK44649.1| FMN adenylyltransferase [Magnetococcus sp. MC-1]
          Length = 307

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 150/297 (50%), Gaps = 5/297 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           +LP+  +G V+ IGNFDG+H GH  +  Q  A+   + +P   ++F PHPR +++   P+
Sbjct: 9   NLPDRFRGAVLTIGNFDGVHRGHQRLFAQLHALGQLHQAPTMAMTFEPHPRRVLRPEQPL 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    + + +++ G  A+   +FT +     AE F++ +L   L ++ V+ G  FRF
Sbjct: 69  DRITGVRGKARWMDQYGLDAMFICRFTRQLQTMPAEDFVRDLLAHGLGIREVVIGENFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G    GD   L   G++YGF      EL       VSS+ +R A+ +     A  LLG  
Sbjct: 129 GSHGRGDFNTLANLGQRYGF-GAHKAELLLEGGVNVSSTGVRQAIRQADFKAAEALLGRP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F IE  VI G + GR LGFPTAN+ L   +    GVY +    +       +AN G NPT
Sbjct: 188 FEIEGRVIAGMRRGRGLGFPTANVALYHLLYPPVGVYLVEAMVEGLWC-PAIANIGSNPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               G L +E  +     ++Y +   V F  ++R E KF D+E LK  +G D   A+
Sbjct: 247 FGDEG-LHMEVHMLVPCSDLYHRNLRVKFHAFVRGEHKFPDVEALKAQIGADVAAAK 302


>gi|325102997|ref|YP_004272651.1| riboflavin biosynthesis protein RibF [Pedobacter saltans DSM 12145]
 gi|324971845|gb|ADY50829.1| riboflavin biosynthesis protein RibF [Pedobacter saltans DSM 12145]
          Length = 330

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 172/322 (53%), Gaps = 35/322 (10%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ-- 64
           I++ +P  ++   V IG FDG+H+GH  I+ Q  + A   N    +L+F PHPR I+   
Sbjct: 7   IDEFIP--IENATVTIGTFDGVHIGHQKIISQLKEEAKRINGETVILTFFPHPRMILHPE 64

Query: 65  -SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             S  + T  P   + ++L+++G   LI   FT + +N S E++I+ +LV+ +  K+++ 
Sbjct: 65  DHSLKLITTMPE--KAELLKQLGVDHLIITPFTRDFSNLSPEEYIKNILVDKIGTKSIVI 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFGKDR+G    LQ   + YG+    I E   N+  I SS+ IR AL  G V +A 
Sbjct: 123 GYDHRFGKDRSGGLPELQTYAKTYGYQVTEIPEQDINEITI-SSTKIREALKNGDVHHAN 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRF----------- 230
             LG+ F +   VI G++IGRTLG+PTAN+ +  +  ++  +G+YA+             
Sbjct: 182 EFLGHAFQLNGKVIKGDQIGRTLGYPTANLFIEEEYKLIPSDGIYAVEVFVDSSVKNKNQ 241

Query: 231 ---------RTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFD 280
                     T     + G+A  G  PT+  NG    +E  IFDF+++IY  R  + F+ 
Sbjct: 242 EIINPYGTENTSGNNKFLGMAYIGHRPTI--NGMSQNIEVNIFDFNEDIYHSRIKLVFWH 299

Query: 281 YLRPEIKFKDIEKLKIYMGEDE 302
           ++R +IKF  +++LK  +  D+
Sbjct: 300 FIRHDIKFSSLDELKNQLANDK 321


>gi|194430667|ref|ZP_03063109.1| riboflavin biosynthesis protein RibF [Escherichia coli B171]
 gi|194411289|gb|EDX27669.1| riboflavin biosynthesis protein RibF [Escherichia coli B171]
 gi|323160059|gb|EFZ46022.1| riboflavin biosynthesis protein RibF [Escherichia coli E128010]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|30249137|ref|NP_841207.1| cytidylyltransferase:riboflavin kinase / FAD synthetase
           [Nitrosomonas europaea ATCC 19718]
 gi|30180456|emb|CAD85061.1| Cytidylyltransferase:Riboflavin kinase / FAD synthetase
           [Nitrosomonas europaea ATCC 19718]
          Length = 323

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 157/296 (53%), Gaps = 16/296 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+HLGH  ++ +  ++A    I   V++F PHPR  +        L+    +
Sbjct: 16  ALTIGNFDGVHLGHQAMIARLKRVAGRLGIASCVMTFEPHPRERLMPEQAPARLTDLREK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L   G S     +F  E A  SAE FI ++L++ + V+ ++ G  FRFG  R+GD  
Sbjct: 76  LELLAGYGVSRTQICRFDHEFAGISAESFITRILLQEMNVRWLLIGEDFRFGARRSGDLT 135

Query: 139 ILQK----RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           +L+K      E      V +DELR      VSS+ +R AL  G++  AA  LG  ++I  
Sbjct: 136 LLRKFFSEPDELEVMSPVTVDELR------VSSTAVRDALASGNLDLAADFLGRPYSISG 189

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS----GVANFGRNPTM 250
            V+ G K+G+ LGFPTAN+ L    L   G++ +     + + ++    GVA+ G  PT+
Sbjct: 190 RVVDGIKLGKKLGFPTANIWLKHHHLPLSGIFVVEANWCNDSGHTRRIRGVASVGVRPTV 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             +   LLE  +FDF ++IYGQ   V F   LR E KF D+E L   + +D  +A+
Sbjct: 250 FEHAQPLLEVHLFDFDEQIYGQHLRVDFLQKLRDEEKFPDMETLVKQIEQDVDRAK 305


>gi|311693402|gb|ADP96275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [marine
           bacterium HP15]
          Length = 323

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 155/314 (49%), Gaps = 27/314 (8%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+HLGH  I++Q    A     P  V+ F P PR   Q        +PP 
Sbjct: 24  GCVATIGNFDGVHLGHKTIIDQVKSKAKALGVPSVVMIFEPQPREFFQGRE-----APPR 78

Query: 77  IQ------EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           +       E +L + G   ++  +F     +YSA  FI  VL+  L V+ ++ G  FRFG
Sbjct: 79  LMGFRQKFEALLAE-GIDIVLCLRFNQAFRSYSAMGFIDDVLIHGLAVRHLVVGDDFRFG 137

Query: 131 KDRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            DRAGD  +L+K G   GF      TV +D  R      VSS+ +R  LT   +  A  L
Sbjct: 138 CDRAGDFALLEKVGYDAGFSVENTLTVTVDGER------VSSTRVRDLLTVNGLEKAESL 191

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   V++G ++GR +G PTAN+ L     L+ GVY +     D   + GVAN G
Sbjct: 192 LGHPYRIRGRVVYGRQLGRQIGAPTANILLHRTPALR-GVYVVAATLDDGARFDGVANIG 250

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+    P  LE  +FDF+  +YGQ   V F   LR E KF  +++LK  +  D   A
Sbjct: 251 VRPTVDGKRP-SLEVHLFDFAGTLYGQHLEVVFRHGLRDEEKFGSVDELKDQIARDFDHA 309

Query: 306 RKILESSYPLSERD 319
           R  +  +  +   D
Sbjct: 310 RAWIAENGSVKSAD 323


>gi|318607186|emb|CBY28684.1| riboflavin kinase; FMN adenylyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 295

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  ARYLANAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   ++  +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDSGLRI-SSTAIRQALYDDDLVLAETLLGHLYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+        S  GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPKSLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + E+YG    V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDITMELYGCHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|329296599|ref|ZP_08253935.1| riboflavin biosynthesis protein RibF [Plautia stali symbiont]
          Length = 312

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 4/306 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           +L    +G V+ IGNFDG+H GH  ++ + I      N P+ V+   P P  +       
Sbjct: 9   NLKEQHRGCVLTIGNFDGVHRGHQALMAELIAEGRKRNLPVVVMLCEPQPLELFAGDKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + K L   G  A++  +F    A +SA+ FI ++LV+ L VK +  G  FRF
Sbjct: 69  ARLTRLREKLKYLALAGVDAVVCVRFDRRFAAHSAQSFISELLVDKLNVKFLAVGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R GD  +LQK G +YGF  +      +   +I SS+ +R AL +     A  LLG+ 
Sbjct: 129 GAGRQGDFLLLQKAGAEYGFEVISTQTYCDGGKRI-SSTAVRQALAQDDFAQAQQLLGHP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F+I   V+HG+ +GRT+GFPTAN+ L   +   +GV+A+      +    GVAN G  PT
Sbjct: 188 FSISGRVVHGDALGRTIGFPTANLPLRRTVTPVKGVFAVEVLGLGEQPIPGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            V      LE  + D    +YG+   V     +R E +F  ++ LK  + +D   AR+  
Sbjct: 248 -VKGLRQQLEVHLLDTHMNLYGRHIEVVLKQKIRDEQRFASLDALKEQIAKDVVTARQFF 306

Query: 310 ESSYPL 315
               P+
Sbjct: 307 GLKTPV 312


>gi|225024894|ref|ZP_03714086.1| hypothetical protein EIKCOROL_01782 [Eikenella corrodens ATCC
           23834]
 gi|224942298|gb|EEG23507.1| hypothetical protein EIKCOROL_01782 [Eikenella corrodens ATCC
           23834]
          Length = 312

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 150/287 (52%), Gaps = 15/287 (5%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPI---F 70
           H  G  V IGNFDG+HLGH  ILE+    A+   +  ++  F P P+        +   F
Sbjct: 13  HPHGSAVTIGNFDGVHLGHRHILERLRHEADERGLAAVAIVFEPQPQEFFSRQRSVEKPF 72

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            LSP   + ++L   G   A+   +F    A  SA  FIQ +L+E L  + ++ G  FRF
Sbjct: 73  RLSPLREKLRLLRDTGCLDAVWVLRFNAGLAAVSAADFIQHLLIEQLHTRHLLIGDDFRF 132

Query: 130 GKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           G  R GD  +L +  E     T  V + ++R       SS+ +R AL++G +  A  LLG
Sbjct: 133 GAGRQGDFSLLSRCPEFTTERTPSVMVQDVR------ASSTLVRQALSEGRLGYAESLLG 186

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           + +++   V HG K+GRT+G PTAN+ L P      GV+ I       T Y GVA+FGRN
Sbjct: 187 HPYSLSGRVKHGAKLGRTIGCPTANLHLPPHRYPLCGVFVIAAHGTFGTRY-GVASFGRN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           PT+       LE+ +FDF+ ++YGQR  + F   LR E KF  + +L
Sbjct: 246 PTVSSLPTQKLEAHLFDFADQLYGQRLCIDFLHKLRDEAKFPGLPEL 292


>gi|219682081|ref|YP_002468465.1| FMN adenylyltransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219621814|gb|ACL29970.1| FMN adenylyltransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086465|gb|ADP66546.1| FMN adenylyltransferase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 5   HNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           HNI EIN +        VV IGNFDGIHLGH  +     +I     ++  V+ F P P  
Sbjct: 8   HNIKEINSN-------SVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +K +
Sbjct: 61  FLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFI 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  R G+  +L+K G KY F+ + I  L  N  +I SS+NIR AL++ ++  
Sbjct: 121 VIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIKI-SSTNIRKALSENNIKL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +        G+
Sbjct: 180 ASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYAIGI 239

Query: 242 ANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  + +
Sbjct: 240 SNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDERFFPSKKELKNQISQ 299

Query: 301 D 301
           D
Sbjct: 300 D 300


>gi|324112588|gb|EGC06565.1| riboflavin biosynthesis protein RibF [Escherichia fergusonii B253]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGVEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|238752261|ref|ZP_04613741.1| FMN adenylyltransferase [Yersinia rohdei ATCC 43380]
 gi|238709529|gb|EEQ01767.1| FMN adenylyltransferase [Yersinia rohdei ATCC 43380]
          Length = 295

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  AKYLAEAGIDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALNDDDLVLAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLSSEPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGRHIDVVLRAKLRDEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|313107206|ref|ZP_07793405.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 39016]
 gi|310879907|gb|EFQ38501.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 39016]
          Length = 312

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%)

Query: 17  LKGGVVA-IGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           L GG VA IGNFDG+HLGH  IL    E+++++    P  V+ F P PR      S    
Sbjct: 13  LAGGCVATIGNFDGVHLGHQAILARLRERSLELG--VPSCVVIFEPQPREFFSPDSAPVR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + ++L   G   ++   F       SA +F+++VLV+ L V+ +  G  FRFG 
Sbjct: 71  LTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGC 130

Query: 132 DRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           DR+GD   L     + GF      TV +D +R      VSS+ +R AL +G +  A  LL
Sbjct: 131 DRSGDFAFLVNASREQGFTVEAAATVELDGVR------VSSTRVRQALAEGDLHLAGRLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F++   V+HG+K+GR LG PTAN+QL        GVY +      Q    GVAN G 
Sbjct: 185 GRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRC-QGVANIGT 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 244 RPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|297180240|gb|ADI16460.1| fad synthase [uncultured bacterium HF770_11D24]
          Length = 321

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 5/299 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           L N  +   +AIG FDG+HLGH  +L QAI+ +  N      ++F+ HP ++I       
Sbjct: 24  LANGSRKACLAIGMFDGVHLGHQQVLRQAIEDSHRNEGRSVAVTFDRHPASVISPDRTPA 83

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L   + + + +E +G  A +  +F    +     +F++++   +  + ++  G  F FG
Sbjct: 84  LLQTRAQRLRAIESLGIDAALLIEFDTAFSRKPGAEFVRELADGFGAIHSICVGANFTFG 143

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G+ G+L+  G+  GFH   +  + +   Q VSS+ IR A+  GH+  A  +LG  F
Sbjct: 144 HRRDGNVGLLRTLGQALGFHVHGLQAV-SLDGQAVSSTRIRAAVRTGHLDAAGQMLGRTF 202

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            IE  V+ G++ GR LGFPTAN+  +   L   GVYA   R   Q ++  V N G  PT+
Sbjct: 203 AIEGTVVEGDRHGRELGFPTANLDTNGLALPPNGVYAAHARL-GQATHRSVLNIGLRPTL 261

Query: 251 V-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             P   L +E+ + DF  ++YGQ   +   + LR E +F   ++L   +  D ++AR +
Sbjct: 262 ANPEPTLQVEAHLLDFDADLYGQAMEIELVERLRDEQRFGSTDELAAQISRDIERARTL 320


>gi|215485186|ref|YP_002327617.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O127:H6 str. E2348/69]
 gi|312966144|ref|ZP_07780370.1| riboflavin biosynthesis protein RibF [Escherichia coli 2362-75]
 gi|331645128|ref|ZP_08346239.1| riboflavin biosynthesis protein RibF [Escherichia coli M605]
 gi|215263258|emb|CAS07573.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289387|gb|EFR17281.1| riboflavin biosynthesis protein RibF [Escherichia coli 2362-75]
 gi|323190296|gb|EFZ75572.1| riboflavin biosynthesis protein RibF [Escherichia coli RN587/1]
 gi|331045885|gb|EGI18004.1| riboflavin biosynthesis protein RibF [Escherichia coli M605]
          Length = 313

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV  L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVRHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|159896778|ref|YP_001543025.1| riboflavin biosynthesis protein RibF [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159889817|gb|ABX02897.1| riboflavin biosynthesis protein RibF [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 314

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 167/296 (56%), Gaps = 7/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+H  H  +L + ++ A  +N    VL+F+PHP  I++    I  L+  + +
Sbjct: 22  LLTIGKFDGVHQAHQQLLRRLVERARQHNCHSAVLTFDPHPDEILRPEREIRYLTTINER 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +++++G   L    FT  T+  S + F+Q +L+  + V+ +  G  F+ G    G   
Sbjct: 82  AALMQELGIDLLAVLPFTHATSQLSPKAFLQ-LLLNHVPVRELWVGPDFKLGHRGTGTIP 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G++ GF TV          +IVSS+ IRT+L  G V  A H LG  F+++  VI 
Sbjct: 141 VLQEFGQELGF-TVEPIPYWTLDGEIVSSTAIRTSLAAGDVQTANHYLGRAFSLQGTVIP 199

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNGPL 256
           G++ GR +GFPTAN+Q++ +  L  +GVY  + +   D+ S+  V N G  PT    G  
Sbjct: 200 GDQRGRKIGFPTANVQIASNHTLPADGVYVCKVQLLDDRRSFGAVTNIGVRPTFGVLG-R 258

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +E+ +FDF+++IYG+   VSF  ++R E KF  IE+L   +G D + AR+ L ++
Sbjct: 259 AVEAHLFDFNEDIYGRPLRVSFLQHIRGEQKFAGIEQLVAQIGRDAQFAREWLANA 314


>gi|297569627|ref|YP_003690971.1| riboflavin biosynthesis protein RibF [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925542|gb|ADH86352.1| riboflavin biosynthesis protein RibF [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 326

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 7/304 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIF 70
           +P       V IGNFDG+H+GH  +      +A     T   ++F PHP  +++    I 
Sbjct: 12  IPAPFPHACVTIGNFDGVHMGHQQLFNTVSDLARRHRGTGVAITFEPHPLQVVRPEIGIK 71

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +S    + +++   G  AL+   FT E A   AEQF+ +VLV  L V+ ++ G  + FG
Sbjct: 72  LISTYEQKVELISMAGIDALLVIPFTQEFAAMDAEQFVDQVLVGTLGVRELVVGYDYAFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R GD   L+  G+K  F    I   + +   +VSSS +R  +  G + +   LLG  +
Sbjct: 132 KGRRGDADFLEACGKKQAFTVRVIPAFKVD-GMVVSSSKVRELVAAGRMEDVTKLLGRYY 190

Query: 191 TIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            +   V  G+K G + LGFPTAN+ L+  D+  K GVY  +        Y GV N G NP
Sbjct: 191 QMRGVVQVGKKRGGSILGFPTANLSLNEHDLCPKHGVYVTQV-VYGGKCYGGVLNIGYNP 249

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +  L  E+ IFDF+Q+IYGQ   ++   +LR E KF   E+L   +  D  +A+++
Sbjct: 250 TFA-DSKLAAETHIFDFNQDIYGQPIKINLLKHLRGERKFSGPEELAAQIARDVTEAKEV 308

Query: 309 LESS 312
           L ++
Sbjct: 309 LAAA 312


>gi|256379824|ref|YP_003103484.1| riboflavin biosynthesis protein RibF [Actinosynnema mirum DSM
           43827]
 gi|255924127|gb|ACU39638.1| riboflavin biosynthesis protein RibF [Actinosynnema mirum DSM
           43827]
          Length = 310

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ +G+FDG+H GH  ++ +A++ A     P  V++F+PHP  +++  S   
Sbjct: 10  IPGGWGRCVLTVGSFDGVHRGHQALIRRAVETAAERGVPSVVMTFDPHPAEVVRPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +++E +G        FT E +   A++F+ +VLV+ L V  V+ G  F FG
Sbjct: 70  KLTDLRRRAELVEALGVDVFCVVPFTPELSRMPADEFVHEVLVDRLHVAAVVVGRNFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              AG+ G+L++ G+++GF T   D L ++     SS+  R  +  G V  AA  LG   
Sbjct: 130 SRAAGNVGLLRELGQRFGFVTEGAD-LLSDDGVTYSSTYTRACIDAGDVAAAATALGRPH 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +E  V+ G+  GR LGFPTANM L     +  +GVYA  F      +     + G NPT
Sbjct: 189 RLEGVVVRGDGRGRDLGFPTANMSLPESAAVPADGVYACWFVRDGHPTMRAAVSVGTNPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   +E+++ DF  ++YGQ   + F   LR  +KF  +E L   M  D   AR  L
Sbjct: 249 F-SGKERRVEAYVLDFDDDLYGQTVALDFVARLRGMVKFDGVEALVEQMHRDVADARVQL 307

Query: 310 ESS 312
             +
Sbjct: 308 PDA 310


>gi|330813621|ref|YP_004357860.1| riboflavin kinase / FMN adenylyltransferase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486716|gb|AEA81121.1| riboflavin kinase / FMN adenylyltransferase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 300

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 5/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI 69
           +L   ++  V+AIGNFDG+H GH  I +   KIA  N     V++F P P    Q +   
Sbjct: 2   ALNKIVRNAVIAIGNFDGVHKGHQSIFKLGKKIAKRNKQKFGVITFAPLPYEFFQKNKKN 61

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++   ++  +++K     +   KF  + +  SAE FI +++++ L    +I G  FRF
Sbjct: 62  IRITLDDLKVDLIKKNDVDFVFICKFNKKFSMISAENFITEIVIKKLNPAHIIVGKNFRF 121

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R G+  +L+K G+ + F    +   + NK++I SS+ IR A+ KG+V  A  LLG  
Sbjct: 122 GNKRKGNIALLRKFGKVHNFKVSDLRLAKENKTKI-SSTRIRLAIEKGNVDLAGRLLGRN 180

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           ++I   VI G K+GR LGF TAN+ +  +I  K GVYA++ + +++  Y+GVANFG  PT
Sbjct: 181 WSIREKVIPGRKVGRQLGFRTANIIIKNNIAPKTGVYAVKAKIKNKI-YNGVANFGLAPT 239

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              N  L+LE  +F      YGQ   ++F   LR E  FK+   L   + +D   A++IL
Sbjct: 240 FSRN-KLVLEINLFKKIPSFYGQFAEIAFVKRLRNEKSFKNKILLIRQIKKDITTAKEIL 298

Query: 310 ES 311
           + 
Sbjct: 299 KK 300


>gi|256025342|ref|ZP_05439207.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 4_1_40B]
          Length = 313

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKTPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIAHDELTAREFFGLTKP 312


>gi|291614549|ref|YP_003524706.1| riboflavin biosynthesis protein RibF [Sideroxydans lithotrophicus
           ES-1]
 gi|291584661|gb|ADE12319.1| riboflavin biosynthesis protein RibF [Sideroxydans lithotrophicus
           ES-1]
          Length = 308

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 14/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V IGNFDG+HLGH  +L +  A   A      V+ F PHPR           L+    +
Sbjct: 16  AVTIGNFDGVHLGHQALLGELRAAAQARGLQTAVVIFEPHPREFFTPQQAPARLTSLREK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++   MG   +   +F +  A  +A+ FI   L + L  + V+ G  FRFG  RAGD  
Sbjct: 76  LELFRTMGVDRVHVCRFDVLFAKQTADDFIH-ALYDSLHARFVLIGDDFRFGSGRAGDFA 134

Query: 139 ILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           ++QK G + GF     H+V  D +R      +SS+ IR AL  G +  A   LG  ++I 
Sbjct: 135 LMQKIGAQRGFEVAAVHSVLHDGVR------ISSTAIREALAAGQIRMARDYLGRPYSIS 188

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+ +GR LG+PTAN+QL  ++   +G+Y +    +      GV++ G  PT+  +
Sbjct: 189 GRVVHGDGMGRKLGYPTANIQLKHNLPPLKGIYVVLAHAEGLGVLQGVSSLGVRPTLKQD 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +LE  +F+F+Q+IYG+   V F   LR E K+ ++E L   +  D + A++
Sbjct: 249 AKPVLEVHLFEFAQQIYGKHLRVEFLQKLRNEEKYPNLEALTRQIALDVEHAKQ 302


>gi|15616770|ref|NP_239982.1| FMN adenylyltransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681525|ref|YP_002467910.1| FMN adenylyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471206|ref|ZP_05635205.1| FMN adenylyltransferase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387019|sp|P57250|RIBF_BUCAI RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|25302141|pir||D84947 FMN adenylyltransferase (EC 2.7.7.2) [imported] - Buchnera sp.
           (strain APS)
 gi|10038833|dbj|BAB12868.1| riboflavin kinase / FMN adenylyltransferase [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
 gi|219624368|gb|ACL30523.1| FMN adenylyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 313

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 164/303 (54%), Gaps = 16/303 (5%)

Query: 5   HNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           HNI EIN +        VV IGNFDGIHLGH  +     +I     ++  V+ F P P  
Sbjct: 8   HNIKEINSN-------SVVTIGNFDGIHLGHQKLFSHIYQIGQKYKLSTIVVLFEPQPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++ ++    ++    +EKI  +    F +++  KF     + SA+ FI  +L+  L +K
Sbjct: 61  FLRKNNAPVRIT--KFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHLK 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  FRFG  R G+  +L+K G KY F+ + I  L  N  +I SS+NIR AL++ ++
Sbjct: 119 FIVIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIKI-SSTNIRKALSENNI 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +        
Sbjct: 178 KLASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYAI 237

Query: 240 GVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           G++N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  +
Sbjct: 238 GISNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDEQFFPSKKELKNQI 297

Query: 299 GED 301
            +D
Sbjct: 298 SQD 300


>gi|261346443|ref|ZP_05974087.1| riboflavin biosynthesis protein RibF [Providencia rustigianii DSM
           4541]
 gi|282565427|gb|EFB70962.1| riboflavin biosynthesis protein RibF [Providencia rustigianii DSM
           4541]
          Length = 312

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 6/304 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSS 67
           Q++ ++  G V+ IGNFDG+H GH ++L Q +K+       P  V+ F P P        
Sbjct: 8   QNIRSYHHGCVLTIGNFDGVHRGHQVLL-QNLKLKGKQLGLPTVVMIFEPQPLEFFTGDK 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+    + K L   G   L+  +F    A+ + E F+  +LV+ L VK +  G  F
Sbjct: 67  APARLTRLRDKVKYLADSGVDYLLCVEFNQHFASLTPEAFVSDLLVDKLGVKYLAIGDDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFGK+R GD   LQ+ GE+ GF     +   ++  +I SS+ IR A+ + +++ A +LLG
Sbjct: 127 RFGKNRMGDFTFLQQAGERLGFEVADTESFCDSGIRI-SSTAIRKAIQENNLVLAENLLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           + + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+           GVAN G  
Sbjct: 186 HTYCISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVHGLGDKPLPGVANIGTR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+   G   LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR+
Sbjct: 246 PTVSGKGT-QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLDALKEQIANDVVAARE 304

Query: 308 ILES 311
            L +
Sbjct: 305 YLAA 308


>gi|256396839|ref|YP_003118403.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Catenulispora acidiphila DSM 44928]
 gi|256363065|gb|ACU76562.1| riboflavin biosynthesis protein RibF [Catenulispora acidiphila DSM
           44928]
          Length = 320

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 21/316 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      VV IG FDG+H GH  ++  A+    A   P  VL+F+PHP  I++  S   
Sbjct: 10  VPQDFGPSVVTIGVFDGVHRGHREVVRTAVARGRALGVPTVVLTFDPHPSEIVRPGSHPP 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++L   G  A++   F+LE + +S E+F++ VLV+ L  + V+ G  FRFG
Sbjct: 70  LLTTQRHRAELLASEGVDAVLVLPFSLEVSRWSPEEFMRAVLVDCLRARAVVVGANFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              AGD   LQ+ G ++GF  V +       E  +N+    SS+ +R  +  G V  AA 
Sbjct: 130 HRAAGDVAALQEAGGRFGFEVVPVHLMGPEGESADNR---FSSTRVRALIADGEVAAAAD 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT-----QDQTSY 238
           LLG    +E  V+ G++ GR LG+PTAN++  P   +  +GVYA    T     +    +
Sbjct: 187 LLGRPHRVEGVVVRGDQRGRELGYPTANVETVPFAAVPTDGVYAGWLITDVDKPEKSVRH 246

Query: 239 SGVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
               + G NPT   +G    +E++  D    ++YG    V F   LR  +KF  +E L  
Sbjct: 247 PAAISIGTNPTF--DGVDRRVEAYALDRDDLDLYGTHVAVEFAARLRDTLKFDSVEALLD 304

Query: 297 YMGEDEKKARKILESS 312
            M +D K AR+I +++
Sbjct: 305 RMADDCKAAREITDAA 320


>gi|116052704|ref|YP_793020.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|254244542|ref|ZP_04937864.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 2192]
 gi|296391375|ref|ZP_06880850.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PAb1]
 gi|115587925|gb|ABJ13940.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197920|gb|EAZ61983.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 2192]
          Length = 312

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%)

Query: 17  LKGGVVA-IGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           L GG VA IGNFDG+HLGH  IL    E+++++    P  V+ F P PR      S    
Sbjct: 13  LAGGCVATIGNFDGVHLGHQAILARLRERSLELG--VPSCVVIFEPQPREFFSPDSAPVR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + ++L   G   ++   F       SA +F+++VLV+ L V+ +  G  FRFG 
Sbjct: 71  LTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGC 130

Query: 132 DRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           DR+GD   L     + GF      TV +D +R      VSS+ +R AL +G +  A  LL
Sbjct: 131 DRSGDFAFLVNASREQGFTVEAAATVELDGVR------VSSTRVRQALAEGDLHLAERLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F++   V+HG+K+GR LG PTAN+QL        GVY +      Q    GVAN G 
Sbjct: 185 GRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRC-QGVANIGT 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 244 RPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|238782685|ref|ZP_04626715.1| FMN adenylyltransferase [Yersinia bercovieri ATCC 43970]
 gi|238716345|gb|EEQ08327.1| FMN adenylyltransferase [Yersinia bercovieri ATCC 43970]
          Length = 295

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 153/297 (51%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG +R GD  
Sbjct: 61  ARYLAEAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAERQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   ++  +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDSGLRI-SSTAIRQALHDDDLVQAEVLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|221199258|ref|ZP_03572302.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2M]
 gi|221205840|ref|ZP_03578855.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2]
 gi|221174678|gb|EEE07110.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2]
 gi|221180543|gb|EEE12946.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2M]
          Length = 330

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 160/323 (49%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +RTAL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRTALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLEAAASALGHSYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           + +D   AR          ERDR
Sbjct: 296 IAQDVANARAY------FIERDR 312


>gi|326621742|gb|EGE28087.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 295

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 8/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q        P+ V+ F P P+ +  +      L+   ++
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPQELFATDKAPARLT--RLR 58

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD
Sbjct: 59  EKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGD 118

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI   V
Sbjct: 119 FLLLQKAGVEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISGRV 177

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 178 VHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGVRQ 236

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 237 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 287


>gi|300948626|ref|ZP_07162710.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 116-1]
 gi|300956952|ref|ZP_07169204.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 175-1]
 gi|300316242|gb|EFJ66026.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 175-1]
 gi|300451852|gb|EFK15472.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 116-1]
          Length = 313

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGYVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|251780265|ref|ZP_04823185.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243084580|gb|EES50470.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 308

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 158/293 (53%), Gaps = 12/293 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           +N E  Q+  N+     VA+G+FDG+H+GH  ++++ I+IA  NN    V +F  HPR  
Sbjct: 6   NNFEDVQTYDNY-----VALGSFDGLHIGHLSLIDEVIRIARKNNGKSMVFTFKNHPRKF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           I  ++ +  L     + K+LE  G        F  E    + E+FI K L   L +K ++
Sbjct: 61  INPNNTLKLLMENDDKIKMLEDKGIDIAYFANFNEEFMKITPEEFI-KFLCVNLNIKGIV 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  ++FG    GD  +L++  +KYG+    +D     K +++SS+ IR  L  G+V  A
Sbjct: 120 VGFNYKFGYKNLGDTKLLKELQKKYGYELHVMDSC-TYKDEVISSTRIRRELEAGNVSEA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGV 241
           + +L   + I+ +++HG +IGR +GFPTAN++ + D +L K GVY    R  ++  Y G+
Sbjct: 179 SIMLNRPYFIKGEIVHGREIGRIMGFPTANLKYNKDTILPKIGVYYTNVRVNNKI-YRGI 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            N G NPT V    + LE+ I DF  +IYG    V F   +R + KF  ++ L
Sbjct: 238 TNIGNNPT-VNGKEITLETNILDFDNDIYGNTIEVYFIKKIRDQKKFDSVDDL 289


>gi|241759892|ref|ZP_04757992.1| riboflavin biosynthesis protein RibF [Neisseria flavescens SK114]
 gi|241319900|gb|EER56296.1| riboflavin biosynthesis protein RibF [Neisseria flavescens SK114]
          Length = 335

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 20/312 (6%)

Query: 6   NIEINQS-LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           NI + Q   P   +G  V IGNFDG+HLGH  IL++  + A+    P+ V+ F P P+  
Sbjct: 29  NIWLGQRHAPKFPQGAAVTIGNFDGVHLGHKHILQKLKREADQRGLPVVVVVFEPQPKEF 88

Query: 63  IQSSSP---IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               +     + +SP   + ++L + G   A+   +F    ++ SA+ FI ++L + L  
Sbjct: 89  FARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFNQAFSDMSAQAFIDQLLRQTLNT 148

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTK 176
           + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ 
Sbjct: 149 RYLLIGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSD 202

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +     D T
Sbjct: 203 GRLEYAKKLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVE---ADGT 259

Query: 237 --SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +  GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE L
Sbjct: 260 FGTRRGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIEAL 319

Query: 295 KIYMGEDEKKAR 306
           K  + +D + AR
Sbjct: 320 KTQILQDMEDAR 331


>gi|225374831|ref|ZP_03752052.1| hypothetical protein ROSEINA2194_00452 [Roseburia inulinivorans DSM
           16841]
 gi|225213292|gb|EEG95646.1| hypothetical protein ROSEINA2194_00452 [Roseburia inulinivorans DSM
           16841]
          Length = 307

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 8/284 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSIQ 78
           V+++G FDGIH GH L++E+ A K        + +F+  P+  ++   + + T +   + 
Sbjct: 17  VISLGKFDGIHRGHELLMEKLAQKKEEGLKAAIFTFDIPPKKNVEHIEAKVLTTNEEKMH 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I E +G   LI   FT E      E FI ++LVE L VK ++ G  F FG +R GD  
Sbjct: 77  --IFEGIGIDYLIECPFTREVMCMEPEDFI-RMLVEKLNVKCIVAGEDFHFGHNRRGDYQ 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++    YG+  + + +++ ++  I SS+ +R  +  G++  A HLLGYR+ +   V H
Sbjct: 134 MLKRYALVYGYEALILSKMKEDERDI-SSTFVREEIMAGNIEKANHLLGYRYFVTGMVKH 192

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G +IGRT+G PT N+    + LL   GVY       D+  Y GV N G  PT+  N P+ 
Sbjct: 193 GNQIGRTIGIPTINLIPPEEKLLPPFGVYVTEVFIDDK-RYYGVTNVGCKPTIKGNNPVG 251

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           +E+ + DF +++Y +  TV F   +R E KF+ IEKL+  M  D
Sbjct: 252 VETHLLDFREDVYEKVVTVEFRTMIREERKFESIEKLQEQMMND 295


>gi|161523964|ref|YP_001578976.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|189351275|ref|YP_001946903.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|221211479|ref|ZP_03584458.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD1]
 gi|160341393|gb|ABX14479.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans ATCC
           17616]
 gi|189335297|dbj|BAG44367.1| riboflavin kinase [Burkholderia multivorans ATCC 17616]
 gi|221168840|gb|EEE01308.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD1]
          Length = 330

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 160/323 (49%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +RTAL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRTALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLEAAASALGHSYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           + +D   AR          ERDR
Sbjct: 296 IAQDVANARAY------FIERDR 312


>gi|108804253|ref|YP_644190.1| riboflavin kinase/FMN adenylyltransferase [Rubrobacter xylanophilus
           DSM 9941]
 gi|108765496|gb|ABG04378.1| riboflavin kinase / FMN adenylyltransferase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 299

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 4/299 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           ++G VVAIGNFDG+HLGH  +L +A++   A    +   +F+PHPR +++       L+P
Sbjct: 1   MRGVVVAIGNFDGVHLGHRAVLGRALEEGRARGMRVVAATFHPHPRAVLRPGEAPPLLTP 60

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             ++ +I+  +G   +   +F  + +  S E+F+++VLV  L     + G  FRFG   A
Sbjct: 61  LPVRRRIILGLGVDEVRIIRFDGKLSRKSPEEFVREVLVGELGAAVAVVGENFRFGHRAA 120

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD   L++    +G   V +     +  + VSSS IR  + +G V  AA LLG    +  
Sbjct: 121 GDFRELERLMRSFGGEAVAVPVRGLDGGEEVSSSRIRRLVLEGRVEEAARLLGRPHAVCG 180

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+ GE  G  +G+PTAN++    + +   GVYA   R   +  Y+   N G  PT    
Sbjct: 181 RVVEGEGRGSRIGYPTANVRPEEGVAVPGRGVYACTVRV-GEGRYAACTNVGVAPTFGGR 239

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              L+E+ + DF  ++YG +  V F   +R E KF  +E+L+  +  D  +AR+I  ++
Sbjct: 240 AESLVEAHLLDFEGDLYGLQIEVEFLRRIRGEKKFGGVEELREQIARDLLEARRITNAT 298


>gi|158313039|ref|YP_001505547.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia sp.
           EAN1pec]
 gi|158108444|gb|ABW10641.1| riboflavin biosynthesis protein RibF [Frankia sp. EAN1pec]
          Length = 309

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 158/300 (52%), Gaps = 6/300 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           +++P+   GG++ IG FDG+HLGH  I+ +A+++A        V++F+PHP  +++  + 
Sbjct: 8   ENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAEVLRPGTH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++LE +G  AL    FTL+ +  +AE F+ +++   L    V+ G  F 
Sbjct: 68  PALLTTLRHKAELLEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G    G+   L + G   GF TV    L +   Q++SS+ IR  +  G V  AA  LG 
Sbjct: 128 YGHRALGNVETLARGGRSEGF-TVEGIGLVHADEQVLSSTAIRRRVADGDVEGAAAALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
              +E  V+HG+  GR +G+PTAN+Q +P   +  +GVYA   R   Q   + + + G N
Sbjct: 187 PHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI-SIGTN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+F+ DF  ++YG+     F   LRP ++F  +++L + M  D    R 
Sbjct: 246 PTF-EGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVDATRA 304


>gi|152986458|ref|YP_001350533.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PA7]
 gi|150961616|gb|ABR83641.1| riboflavin biosynthesis protein RibF [Pseudomonas aeruginosa PA7]
          Length = 312

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 147/287 (51%), Gaps = 15/287 (5%)

Query: 17  LKGGVVA-IGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLS 73
           L GG VA IGNFDG+HLGH  IL +  + +     P  V+ F P PR      S    L+
Sbjct: 13  LAGGCVATIGNFDGVHLGHQAILARLRERSQELGVPSCVVIFEPQPREFFSPDSAPVRLT 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + ++L   G   ++   F       SA +F+++VLV+ L V+ +  G  FRFG DR
Sbjct: 73  RLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGCDR 132

Query: 134 AGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +GD   L     + GF      TV +D +R      VSS+ +R AL  G +  A  LLG 
Sbjct: 133 SGDFAFLVNASREQGFTVEAAATVELDGVR------VSSTRVRQALADGDLHLAERLLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F++   V+HG+K+GR LG PTAN+QL        GVY +      Q    GVAN G  P
Sbjct: 187 PFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRC-QGVANIGTRP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           ++  +G   LE  + DFS ++YG+   V+F   LR E +F  +E LK
Sbjct: 246 SVNGDGRPHLEVHLLDFSGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|15599757|ref|NP_253251.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PAO1]
 gi|107099776|ref|ZP_01363694.1| hypothetical protein PaerPA_01000794 [Pseudomonas aeruginosa PACS2]
 gi|218893656|ref|YP_002442525.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa LESB58]
 gi|254238691|ref|ZP_04932014.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa C3719]
 gi|9950806|gb|AAG07949.1|AE004869_13 riboflavin kinase/FAD synthase [Pseudomonas aeruginosa PAO1]
 gi|126170622|gb|EAZ56133.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa C3719]
 gi|218773884|emb|CAW29698.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa LESB58]
          Length = 312

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%)

Query: 17  LKGGVVA-IGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           L GG VA IGNFDG+HLGH  IL    E+++++    P  V+ F P PR      S    
Sbjct: 13  LAGGCVATIGNFDGVHLGHQAILARLRERSLELG--VPSCVVIFEPQPREFFSPDSAPVR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + ++L   G   ++   F       SA +F+++VLV+ L V+ +  G  FRFG 
Sbjct: 71  LTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGC 130

Query: 132 DRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           DR+GD   L     + GF      TV +D +R      VSS+ +R AL +G +  A  LL
Sbjct: 131 DRSGDFAFLVNASREQGFTVEAATTVELDGVR------VSSTRVRQALAEGDLHLAERLL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  F++   V+HG+K+GR LG PTAN+QL        GVY +      Q    GVAN G 
Sbjct: 185 GRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRC-QGVANIGT 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 244 RPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|220907792|ref|YP_002483103.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7425]
 gi|219864403|gb|ACL44742.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7425]
          Length = 311

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 10/307 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSS 66
           I  +L   L   ++A+GNFDG+H GH  ++   Q + I   + +TV++F+PHP+    + 
Sbjct: 3   ITSTLQTVLTPTILALGNFDGVHRGHQQVIASLQDLDI-EAAYLTVVAFDPHPQEFF-TG 60

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            P   L+PP  + ++L ++G   L+   F    A+ S + F+++VLV  L+ K +  G  
Sbjct: 61  KPRLLLTPPEEKGQVLARLGVDQLVLLPFNERLASLSPQDFVEEVLVRQLQAKAISVGFN 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  RAG    L       G     +   +  + +I SSS IR  L +G V  A  LL
Sbjct: 121 FCFGYQRAGTTEDLVAIATPAGVRVTIVPPQQFEQERI-SSSAIRKFLAEGAVERANQLL 179

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS--GVAN 243
           G  +T+   VI G++ GR LGFPTAN++L  +  L + GVYA+R  T D       GV N
Sbjct: 180 GRPYTLIGRVIGGDRRGRQLGFPTANLELPANKFLPQPGVYAVRV-TGDGLGQQQFGVMN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+   G   +E  + D+S ++YGQ  TV    +LRPE +F  +E L+  +  D +
Sbjct: 239 LGCRPTVQGTG-TAVEVHLLDWSGDLYGQSLTVYLEKFLRPEQRFPSLEALQAQIRVDCQ 297

Query: 304 KARKILE 310
            AR + +
Sbjct: 298 TARHLFD 304


>gi|317121861|ref|YP_004101864.1| FMN adenylyltransferase; riboflavin kinase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591841|gb|ADU51137.1| FMN adenylyltransferase; riboflavin kinase [Thermaerobacter
           marianensis DSM 12885]
          Length = 327

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 154/313 (49%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNP 57
           M V + IE    S P       VA+G FDG+H GH  +L    A   A  +    L+F+P
Sbjct: 1   MEVIYGIENWRGSQPA-----CVAVGTFDGVHRGHQALLRGAVAAAHAQQAVAVALTFDP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        L     +  +    G    +  +F    A  SAE F + VL E L+
Sbjct: 56  HPLAVLAPDRVPLLLGTLEDRLALFAAAGIDRALVMRFDRHLAQTSAEDFARGVLAERLQ 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V  G  FRFG+  AG    L++ G ++GF T  +  +R   +Q+VSSS +R  L  G
Sbjct: 116 ARAVFVGYNFRFGRGGAGTPEDLERWGSRWGFWTHVVPPVRVG-NQVVSSSRVRALLEAG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT 236
            V  AA  LG  +++   V+ GE  G  LGFPTAN++L+ +++L   GVYA+  R  D  
Sbjct: 175 QVEAAAEALGRLYSVAGRVVRGEGRGAGLGFPTANLELAANLVLPAPGVYAVWVRHGDAL 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN GR PT    G L LE  + D + ++YGQ   V F   LR E +F   E+L  
Sbjct: 235 R-PGVANLGRRPTF-GGGELRLEVHLLDGAADLYGQVLRVGFARRLREERRFAGPEELVS 292

Query: 297 YMGEDEKKARKIL 309
            +  D + AR  L
Sbjct: 293 QIRRDVEAARDAL 305


>gi|284030884|ref|YP_003380815.1| riboflavin biosynthesis protein RibF [Kribbella flavida DSM 17836]
 gi|283810177|gb|ADB32016.1| riboflavin biosynthesis protein RibF [Kribbella flavida DSM 17836]
          Length = 323

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 22/329 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA---NNSPITVLSFNP 57
           M V+H +  ++  P++    VV IGNFDG+H GH  +L  A   A      P+  L+F+P
Sbjct: 1   MRVWHGL--DEVGPDYGPS-VVTIGNFDGVHRGHQEVLAHARARAEQLGGLPVVALTFDP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  +++      T+S P+ + ++L   G  A++   F  ET+N+S ++FI +VLV  L+
Sbjct: 58  HPIAVLRPDRAPATISEPAERARLLGDAGADAVLILPFDKETSNWSPQEFIDRVLVGTLQ 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K V+ G  FRFG   AG    L + G   GF    +  L+ +  Q  SS+ IR  +  G
Sbjct: 118 AKAVVVGENFRFGHRAAGHVDTLVEAGAVAGFQVEGL-ALKGD-GQPWSSTAIRELVAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQT 236
            V  AA  LG    +   V+ G+K GR LG+PTAN+   P   +  +GVYA      D  
Sbjct: 176 DVEGAATALGRPLRVTGRVVEGDKRGRELGYPTANIPAEPGAAVPLDGVYAGWLTVLDPA 235

Query: 237 --------SYSGVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLR-PE 285
                    +    + G NPT   +G    +ES++ D    E+YG R  V F   LR  +
Sbjct: 236 PGAPAYGDPFPAAISVGSNPTF--DGVDRRVESYVLDRDDLELYGSRIAVDFVARLRGSQ 293

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESSYP 314
           I+F  I+ L + M  D   AR++L    P
Sbjct: 294 IRFDSIDDLLVQMKADVDAARRLLTGDTP 322


>gi|310658990|ref|YP_003936711.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Clostridium
           sticklandii DSM 519]
 gi|308825768|emb|CBH21806.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           sticklandii]
          Length = 310

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   V IGNFDG+HLGH  ++ + I I     I   + +F+ HP   +     I  L+  
Sbjct: 14  KPTAVTIGNFDGVHLGHRELINRTIAIGEEKDILPVMFTFSNHPLEFLYQKQ-IDYLTSF 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + KI+E+MG   L+   F     + S E F +++L+  L    +I G   + G  R G
Sbjct: 73  EQKVKIIEQMGIKDLVSVPFDYTIKDMSTEVFAKEILLSKLNATDIIMGFDSKLGNGRQG 132

Query: 136 DRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
               L + G+K GF       V I+ +R      VSSS IR  +  G V  A   LG ++
Sbjct: 133 SVDYLYEVGKKLGFDVHIVQPVMIENMR------VSSSFIRELIKTGEVKRADFFLGRKY 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +E  V+HG+K+GR LGFPTAN++++ DILL K GVY  +   +D+  Y    + G NPT
Sbjct: 187 MLEGKVVHGKKLGRKLGFPTANLEVNQDILLPKRGVYYCKIEIEDKI-YDAAVSIGYNPT 245

Query: 250 MVPNGP---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  N P   + +E+ I +F  +IYG+   + F D LR E++F  ++ L
Sbjct: 246 IQSNKPFQEIFVEAHILEFEDDIYGKSVKLYFMDRLRDELRFNSLDDL 293


>gi|186475342|ref|YP_001856812.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia phymatum STM815]
 gi|184191801|gb|ACC69766.1| riboflavin biosynthesis protein RibF [Burkholderia phymatum STM815]
          Length = 330

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 159/314 (50%), Gaps = 14/314 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARSLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++++V  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRMNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G +YGF    +  + +     +SSS +RT+L  G
Sbjct: 116 ARWVMIGDDFRYGAKRAGDFNSLKTAGAEYGFEVEQMATVADPSGARISSSGVRTSLIAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ ++    D   
Sbjct: 176 DLDSARAALGRDYLISGHVVHGLKLGRDLGFPTLNLPIAHKRPALSGIFIVQVHGIDDKP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLETLTAA 295

Query: 298 MGEDEKKARKILES 311
           +  D + AR   E+
Sbjct: 296 IARDVENARAWFEA 309


>gi|332976848|gb|EGK13673.1| riboflavin biosynthesis protein RibF [Desmospora sp. 8437]
          Length = 316

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 171/312 (54%), Gaps = 16/312 (5%)

Query: 9   INQSLPNHLKGGV----VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           I+ + P H++  V    +AIG FDG+HLGH  ++E+A +IA    ++  V++F+PHPR +
Sbjct: 4   IHLTYPLHIEREVPPVSLAIGYFDGVHLGHRSVIERARQIAGELGVSPAVMTFHPHPREV 63

Query: 63  IQSSSPIFTLSPPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           +  +S    L+P  ++EK+L  E++G   +   KF  E A+ + E+FI++VL+  L+V+ 
Sbjct: 64  LGKASVSRYLTP--LREKLLRFEELGVQRVYVMKFDRELASRTREEFIEEVLIP-LKVRG 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G  F FG+  AG    L +  +  G   V I     +    VSS+ +R  L +G V 
Sbjct: 121 VTVGFNFTFGRGAAGKAEDLNRLSD--GRFQVEIVHPIASDGDFVSSTRLRQTLDEGDVE 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQTSY 238
            A  +LG  +++  +V+ G++ GRT+GFPTAN++L  P I+   GVY +R R + D    
Sbjct: 179 AAMKILGRPYSLRGEVVQGDQRGRTIGFPTANIRLEEPFIIPATGVYVVRVRREGDSKDL 238

Query: 239 SGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G+ N G  PT     P+  LE  +FD  + +YG R  V F   LR E  F  +  L   
Sbjct: 239 FGMMNIGYRPTFRDPDPVKTLEVHLFDLDENLYGDRLEVEFLHRLRGEQPFASVTALTEQ 298

Query: 298 MGEDEKKARKIL 309
           +  DE+ +R  L
Sbjct: 299 LKSDERNSRAWL 310


>gi|254880906|ref|ZP_05253616.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254833699|gb|EET14008.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 306

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 164/304 (53%), Gaps = 11/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A    +   +++F  HPR +IQ++ 
Sbjct: 9   HQTLP----PSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVHPRQVIQTAY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P+ + ++LE M         FT E + +SA +F+Q +L     + T++ G   
Sbjct: 65  RPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+ +     + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGKI-SSSVIRQLLKEGKVSQAAKFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  ++G+ N G
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWAGMLNIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L   M +D +K 
Sbjct: 242 HRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIAQMHKDREKT 301

Query: 306 RKIL 309
            KIL
Sbjct: 302 AKIL 305


>gi|300310737|ref|YP_003774829.1| riboflavin biosynthesis protein [Herbaspirillum seropedicae SmR1]
 gi|300073522|gb|ADJ62921.1| riboflavin biosynthesis protein [Herbaspirillum seropedicae SmR1]
          Length = 325

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+HLGH  +L +  + A    +   V++F PHPR      +     +P  I 
Sbjct: 17  ALTIGNFDGVHLGHQALLARVREAAGKLGLDAAVMTFEPHPREFFAQLAGTPERAPARIA 76

Query: 79  E-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
                 + L   G   ++   F    A  S + FI+K+LV+ L V+ ++ G  F FG  R
Sbjct: 77  NLRDKLEALANSGIDRVVVEHFGSHFAALSPQDFIEKILVQGLHVRWLMVGDDFCFGARR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           AG    L   G++YGF    +  + N   +I SSS +R AL +     +  LLG+ + I 
Sbjct: 137 AGTLDTLIAAGQQYGFEVHALPTVTNAGVRI-SSSAVRAALAEADFGLSRQLLGHPYAIS 195

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+K+GRT+GFPT NM++        G++ ++     +     VA+ G  PT+  +
Sbjct: 196 GRVVHGKKLGRTIGFPTLNMRVGHKRPALSGIFVVQVHGLAEQPLPAVASLGVRPTVDDS 255

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE--S 311
           G +LLE+ + DF  + YG+   V F   LR E K+ D+  L   +  D   AR      +
Sbjct: 256 GRVLLETHLLDFKGDCYGKLVRVEFLKKLRDEEKYVDLPTLTAAIARDVDHARAWFRENA 315

Query: 312 SYPLSERDRI 321
            + +S  DRI
Sbjct: 316 GFAVSATDRI 325


>gi|326793615|ref|YP_004311435.1| riboflavin biosynthesis protein RibF [Marinomonas mediterranea
           MMB-1]
 gi|326544379|gb|ADZ89599.1| riboflavin biosynthesis protein RibF [Marinomonas mediterranea
           MMB-1]
          Length = 309

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 4/288 (1%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           GV+ IGNFDG+HLGH  IL +   +A    SP  V+ F P PR      S    ++    
Sbjct: 17  GVLTIGNFDGVHLGHQTILSRVKSLAKQYQSPAGVMIFEPQPREFFAPESAPGRITRMRD 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L++ G   ++   F  +  N  A +F   +L E L ++ ++ G  FRFG DR GD 
Sbjct: 77  KIELLQQQGIDYVLCLPFNNKLRNLDASEFCNLILKEGLHIRHLVVGDDFRFGCDRQGDF 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L + GE   F       + +  ++ +SS+ +R  L  G   +A   +G+   +   VI
Sbjct: 137 EYLSRFGELSEFDVESTSSVLSQNNERISSTLVRQQLESGRFDDALRSMGHSLVMSGRVI 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+++GRT+GFPTAN+ L        GVYA+ F   D   Y GVAN G  PT+    P L
Sbjct: 197 GGKQLGRTIGFPTANVHLKGCEPALRGVYAVSFFV-DGQQYQGVANIGVRPTVDGKYP-L 254

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           LE  +FDF  ++Y +  +V F  ++RPE K   +++L+  +  D+++A
Sbjct: 255 LEVHVFDFDGDLYHKYVSVEFNCFIRPERKMSGLDELEKQIQCDKEEA 302


>gi|294055322|ref|YP_003548980.1| riboflavin biosynthesis protein RibF [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614655|gb|ADE54810.1| riboflavin biosynthesis protein RibF [Coraliomargarita akajimensis
           DSM 45221]
          Length = 315

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AIG FDG+HLGH  ++E A+  A   N    VL+F+PHP  + +   P   + P   + 
Sbjct: 22  LAIGMFDGVHLGHKAVIESAVFSAQRANGVSAVLTFDPHPSVLFRPQDPTRLIMPIEEKC 81

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L ++G   +IR +F+ + A   A+ F+ ++      +  V  G  FRFG  R+GD   
Sbjct: 82  QMLHRVGVDVVIRKEFSFDYAAIPADDFLARLKEALPALAAVYVGENFRFGAKRSGDVAT 141

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G   G        ++ N  + +SS+ IR  L  G + +   LLGY +  + +V+ G
Sbjct: 142 LIETGRLIGLDVYSAPRIKYN-GEPISSTRIRGDLESGRIESVNELLGYNYFADGEVVRG 200

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGPLL 257
            ++GRT+GFPT N+   P      GVY +R + +   S    GVAN+G  PT+  +    
Sbjct: 201 AQLGRTIGFPTLNLPWEPACRPAFGVYFVRLKLKQAGSPWAYGVANYGVKPTVAESELPA 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           LE  + + +    G    V +  ++RPE KF  ++ LK  +G D + ARK+
Sbjct: 261 LEIHMLEDTALDAGATVEVEWLKFIRPEQKFDSLDALKEQIGRDTETARKL 311


>gi|134299800|ref|YP_001113296.1| riboflavin biosynthesis protein RibF [Desulfotomaculum reducens
           MI-1]
 gi|134052500|gb|ABO50471.1| FMN adenylyltransferase / riboflavin kinase [Desulfotomaculum
           reducens MI-1]
          Length = 311

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 161/293 (54%), Gaps = 11/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSS-SPIFTLSPPSI 77
           +VA+GNFDGIHLGH  ++ +A+ +A   N    VL+F PHP  +++   +P   L   S 
Sbjct: 18  IVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLMVLKPEMAPAMLLDQES- 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +++I+ ++G   LI   FT E A+ S E+F++++LV+ + V+ ++ G  + FG   +G  
Sbjct: 77  KQRIMAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGIVVGYNYSFGYKGSGTS 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+    +YG+    I  ++  + Q+VSS+ IR  L +G V+ A   LGY    E  V+
Sbjct: 137 EDLRSYALEYGYSLSVIPPVKVGE-QVVSSTLIRNKLAEGDVIAAKRYLGYYPFTEGIVV 195

Query: 198 HGEKI-GRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            G++  G  LGFPTAN+   PD ++   +GVY++      +T Y GVAN G  PT   N 
Sbjct: 196 TGDRRGGNALGFPTANID-CPDGMMVPAKGVYSVHVELDGET-YLGVANVGTKPTFHGNN 253

Query: 255 PLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P   +E  + DF  +IYG++  V +   LR E KF  +  L   +  D   AR
Sbjct: 254 PRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQADVLSAR 306


>gi|237729319|ref|ZP_04559800.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           sp. 30_2]
 gi|226909048|gb|EEH94966.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           sp. 30_2]
          Length = 312

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           G V+ IGNFDG+H GH  +L    E+  K   N P+ V+ F P P  +  +      L+ 
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLREEGRK--RNLPVMVMIFEPQPLELFATDKSPARLTR 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + + L + G   ++  +F    A  +A+ FI  +LV+ L V+ +  G  FRFG  RA
Sbjct: 74  LREKLRYLAECGVDYVLCVRFDRRFAALTAQTFISDLLVKRLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQ+ G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQEAGAEYGFDITSTQTFCEGGVRI-SSTAVRQALAEDNLQLAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVVLRKKIRSEQRFASLDELKAQIARDELTAREFFGLTKP 311


>gi|317057650|ref|YP_004106117.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 7]
 gi|315449919|gb|ADU23483.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 7]
          Length = 308

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 151/293 (51%), Gaps = 6/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V A+G FDG+H GH L++  A+ +A    +   V +F     T       I  +   
Sbjct: 12  KGTVCALGLFDGVHRGHRLVINNALSLAEKLGVRSAVFTFRTDTVTSKGHDGRIEMILSD 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +  E MG   L    F  E  N SAE F++ +L   L  + V+ G+ FRFGK   G
Sbjct: 72  AEKCRHFEDMGVDLLYSPDFN-ELKNMSAEAFVRDILSGLLGCRAVVCGSDFRFGKGAEG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L+  G  YG   +  D+L + K + VSS+ IR  +  G +  A  LLGY F ++  
Sbjct: 131 DCNTLELYGRIYGIDVMVCDKL-SYKGEEVSSTVIRECIRTGQIEKANELLGYIFGLKLV 189

Query: 196 VIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V HG ++GRT  FPT N  +    IL K GVYA R     ++ + GV N G  PT+  + 
Sbjct: 190 VEHGRQLGRTWNFPTINQTIPRGQILPKFGVYATRVMIDGKSRF-GVTNIGVKPTLKAHD 248

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L E++I DFS ++YG+   +    ++RPE  F  I++LK  +G+D  K R+
Sbjct: 249 APLAETYILDFSGDLYGREIEILLDKFIRPEKGFDSIDELKAQIGKDTLKVRE 301


>gi|304309974|ref|YP_003809572.1| Riboflavin kinase / FAD synthetase [gamma proteobacterium HdN1]
 gi|301795707|emb|CBL43906.1| Riboflavin kinase / FAD synthetase [gamma proteobacterium HdN1]
          Length = 316

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/300 (36%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P+  +  V  +GNFDG+HLGH  I++Q  +       P  V+ F P PR      +    
Sbjct: 14  PHSTQACVATVGNFDGVHLGHAAIIQQLKEHGARLGVPSCVMVFEPQPREFFAPQTAPAR 73

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    + +IL +MG   L+  +F  +    SA +F ++VLV  L V+ ++ G  FRFG 
Sbjct: 74  LTTLREKAEILAEMGVDQLLCVRFDRKFCALSAAEFCERVLVGGLGVQHLVVGDDFRFGH 133

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR GD   L++ G  +GF  V        + + VSS+ IR AL  G    A HLLG  F 
Sbjct: 134 DRVGDFHFLEQAGATFGF-GVEATRTFALEGERVSSTRIREALAAGDFAAAQHLLGRPFG 192

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPT 249
               V HG+K+GRTLG PTAN  L P+ L     GVYA+     D      VA+ G  PT
Sbjct: 193 FSGRVAHGDKLGRTLGVPTAN--LWPNRLKSPLHGVYAVWADLGDGARRPAVASIGARPT 250

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            V      LE+ + DF  ++YG+R  V F   +R E KF  +E+LK  +  D + AR+I 
Sbjct: 251 -VGGTRWRLETHLLDFQGDLYGRRMRVEFITRIRDEKKFSGLEELKANIDNDIQIAREIF 309


>gi|332702454|ref|ZP_08422542.1| riboflavin biosynthesis protein RibF [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552603|gb|EGJ49647.1| riboflavin biosynthesis protein RibF [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 315

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 159/300 (53%), Gaps = 10/300 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII--QSSSPIFTL 72
           L+G    IGNFDG+H GH  ++    + A    +T  V++F PHP      + S P  TL
Sbjct: 14  LEGSCATIGNFDGVHKGHQRLISMTAQRALERGLTSVVVTFEPHPLRFFTGRKSPPSITL 73

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            P  ++  ++  +G    +   F  E A    E F+++ LV+ L VK +  G  + FGK 
Sbjct: 74  LPQKLE--LIAALGPQVTLVLPFNHELAALEPEAFVRRYLVDGLRVKELFIGYDYAFGKG 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G+ G+L   G+++GF    ID +   ++ IVSS+ +R  +  G V  A  LLG  + +
Sbjct: 132 RLGNYGLLTLLGQEHGFAVEQIDPVIVGEA-IVSSTRVRDMVESGRVWEAHDLLGRFYQV 190

Query: 193 ESDVIHGEKI-GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTM 250
              VIHG K  G  LGFPTAN++   ++L K GVYA+   T+       GVAN G NPT 
Sbjct: 191 RGMVIHGRKRGGDLLGFPTANLEPYDELLPKPGVYAVWVETEYPGELRRGVANIGHNPTF 250

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             N  L +E+ I D+  ++YG+   + F   +R E KF   ++L   + ED + +R+IL+
Sbjct: 251 GENA-LSVEAHILDYKAQLYGREIRIHFVQRIRDERKFSGPQELVARINEDVRLSRQILD 309


>gi|34499025|ref|NP_903240.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|34104875|gb|AAQ61232.1| riboflavin kinase [Chromobacterium violaceum ATCC 12472]
          Length = 311

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 152/300 (50%), Gaps = 12/300 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L G  + IGNFDG+H GH  +LE+  A   A   P  +L+F PHPR     ++P   LS 
Sbjct: 13  LPGCALTIGNFDGVHQGHRRMLERLRAEARARELPTALLTFEPHPREFFVRANPPARLST 72

Query: 75  PSIQEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              +  +LE++G    +  Y+F    +N  A  F+ +VLV  L  + ++ G  F+FG  R
Sbjct: 73  LRDKFSLLEELGLVDYVFVYRFNHSFSNMPARDFVDQVLVTELNTRYLLIGDDFQFGSGR 132

Query: 134 AGDRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            GD  +L    R       +V +      K +  SS+ +R  L  G + +A  LLG  + 
Sbjct: 133 KGDFELLASCPRFATEAMPSVLV------KGERASSTLVRERLGAGDLDSANALLGGVYR 186

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+HG+K+GRT+GFPTAN+ L       +GV+ +   T       GVA+ G NPT+ 
Sbjct: 187 ISGKVMHGKKLGRTIGFPTANIHLPHLKPALQGVFVVEVDTPG-GRLGGVASLGLNPTVS 245

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 LE  +FDFS ++YGQR TV F   LR E ++ D+  L   +  D   A+  L S
Sbjct: 246 DTPDYKLEVHLFDFSGDLYGQRLTVRFLKKLRDEARYDDLATLVAQIERDAASAKTYLTS 305


>gi|330685653|gb|EGG97294.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU121]
          Length = 323

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + + H I+ +Q +  ++    +A G FDG+H GH  + +   + A +  +   V++F+PH
Sbjct: 4   IEITHPIQDDQRINENV---AMAFGFFDGMHKGHDKVFQTLDQQAQSRGLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S +  ++        I   F+   AN ++E+FI++ +++   
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKIDMIASHDVDYCIVINFSSRFANVTSEEFIEEYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +L    E   F+T  +   EL + K   +S++ IR AL 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLN---EVDSFNTTIVGKQELDDEK---ISTTAIRDALQ 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-Q 233
            G +  A   LGY + I+  V+ GEK GRT+GFPTAN+  S D LL K+GVYA+      
Sbjct: 174 SGELQKANEELGYLYKIKGTVVQGEKRGRTIGFPTANVHPSDDYLLPKKGVYAVSMEIGT 233

Query: 234 DQTSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +Q  Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPEIKF  I
Sbjct: 234 EQKLYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVVVYWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVEQMNDDKARAKYLLSVDF 315


>gi|83746250|ref|ZP_00943303.1| Riboflavin kinase / FMN adenylyltransferase [Ralstonia solanacearum
           UW551]
 gi|207742566|ref|YP_002258958.1| riboflavin biosynthesis protein [Ralstonia solanacearum IPO1609]
 gi|83727000|gb|EAP74125.1| Riboflavin kinase / FMN adenylyltransferase [Ralstonia solanacearum
           UW551]
 gi|206593959|emb|CAQ60886.1| riboflavin biosynthesis protein [Ralstonia solanacearum IPO1609]
          Length = 354

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 5/313 (1%)

Query: 6   NIEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           ++++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+TV++F PHPR 
Sbjct: 22  HVKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPRE 81

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     ++    + + L + G   ++   F    A  +  +F++ VLV+ L  + +
Sbjct: 82  FFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPTEFVRNVLVDGLHTRWL 141

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  RAGD   LQ  G ++ F    +  +  +  +I SSS +R AL  G + +
Sbjct: 142 LVGDDFRFGAKRAGDFTYLQAAGAQFDFEVEQMGSVSESGIRI-SSSAVREALAAGDLEH 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     V
Sbjct: 201 ARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  PT+  +G +LLE  IFD+    Y +   V F   LR E +F  ++ LK  +  D
Sbjct: 261 ASIGVRPTVDDSGRVLLEVHIFDYHANAYSKLVRVEFMKKLRDEARFDSLDALKDAIARD 320

Query: 302 EKKARKILESSYP 314
              AR     + P
Sbjct: 321 CVDARHFFGLALP 333


>gi|308185614|ref|YP_003929745.1| regulator [Pantoea vagans C9-1]
 gi|308056124|gb|ADO08296.1| putative regulator [Pantoea vagans C9-1]
          Length = 309

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  ++ +  +     N P+ V+ F P P  +         L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALMSRLCEEGRKRNLPVVVMVFEPQPLELFAGDKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + + + G   ++  +F    A  SA++FI  +LV+ L+VK +  G  FRFG  R G
Sbjct: 75  REKLRYMAEAGVDKVLCVRFDRRFAALSAQRFISDLLVDKLDVKYLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF  V  +   +   +I SS+ +R AL    +  A  LLG+ FTI   
Sbjct: 135 DFLLLQKAGAEYGFEVVSTETFCDGGKRI-SSTAVRQALAADDLALAQSLLGHPFTISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRTLGFPTAN+ L   +   +GVYA+  +        GVAN G  PT V    
Sbjct: 194 VVHGDALGRTLGFPTANLPLRRSVSPVKGVYAVEVQGLTPEPLPGVANIGTRPT-VKGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V     +R E +F  +E LK  +  D   AR+
Sbjct: 253 QQLEVHLLDINMDLYGRHIDVVLKQKIRNEQRFASLEALKEQIANDVVTARQ 304


>gi|307132648|ref|YP_003884664.1| bifunctional riboflavin kinase/FAD synthetase [Dickeya dadantii
           3937]
 gi|306530177|gb|ADN00108.1| bifunctional riboflavin kinase/FAD synthetase [Dickeya dadantii
           3937]
          Length = 313

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 149/299 (49%), Gaps = 3/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQPLELFAPEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+   F    A   A  FI  +LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKVKYLAQAGVDYLLCVTFDAGFAANHANTFISSLLVEKLGVKFLVVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +  F  +      ++  + VSS+ +R AL + ++  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGAEQNFEVISTTTFCSSGKR-VSSTAVREALAQDNLALAEELLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GRT+GFPTAN+ L   +    GVYA++          GVAN G  PT+  +   
Sbjct: 195 VHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGDAPLPGVANIGTRPTVNGDKRQ 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR+      P+
Sbjct: 255 QLEVHLLDVALDLYGRHIDVVMCKKLRSEQRFASLDALKQQIANDVVAAREFFGLKAPV 313


>gi|161612366|ref|YP_001586331.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|205351388|ref|YP_002225189.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|161361730|gb|ABX65498.1| hypothetical protein SPAB_00055 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205271169|emb|CAR35956.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|321222385|gb|EFX47457.1| Riboflavin kinase / FMN adenylyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
          Length = 295

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 8/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   ++
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--RLR 58

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD
Sbjct: 59  EKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGD 118

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI   V
Sbjct: 119 FLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISGRV 177

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 178 VHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGVRQ 236

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 237 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 287


>gi|88813006|ref|ZP_01128249.1| hypothetical protein NB231_03997 [Nitrococcus mobilis Nb-231]
 gi|88789784|gb|EAR20908.1| hypothetical protein NB231_03997 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 152/286 (53%), Gaps = 7/286 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKIA---NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           IGNFDG+H GH  +L Q +++A      P  V++F PHPR      +    ++    + +
Sbjct: 35  IGNFDGVHRGHSAVL-QRLRVAAAERGMPAVVVTFEPHPREYFTPDTAPARITGVRDKLR 93

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            L + G   ++  +F    A   AE F++++L+  L V+ ++ G  FRFG+ R GD  +L
Sbjct: 94  ALAQAGVERVLCLEFGPRLAAMEAEDFVREILLAGLGVRFLMIGDDFRFGRGRRGDYSLL 153

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +   ++GF    +  +    ++ VSS+ +R AL  G +  AAHLLG  + I   VI G+
Sbjct: 154 TRAAVEHGFELTRVPTVTLAGAR-VSSTRVRQALGAGDLELAAHLLGRTYRISGRVIRGD 212

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           ++GR LG+PTAN++L       EG++ +R R  D     GVA+ G  P+ V    ++LE 
Sbjct: 213 RLGRRLGWPTANIRLHRARPALEGIFTVRVRGLDGV-LPGVASVGNRPS-VDGRQMVLEV 270

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            + DF  ++YGQ   V F   LR +I+F  +E L   +  D   AR
Sbjct: 271 HLLDFEGDLYGQHIEVEFVRRLRDQIRFSSLEALSEQIARDVAVAR 316


>gi|148244185|ref|YP_001218879.1| bifunctional riboflavin biosynthesis protein RibF [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326012|dbj|BAF61155.1| bifunctional riboflavin biosynthesis protein RibF [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 300

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 159/298 (53%), Gaps = 12/298 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           Q+L  HL G VV IGNFDG+H+GH  I++  +  A   N P  ++SF+P P+     +  
Sbjct: 8   QNLKPHL-GSVVTIGNFDGVHIGHQKIIKTLVNKAQIMNLPSVIVSFSPTPQHFFGHAQA 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             TLS    +  +L  +G    +   F    +  +A  FI ++L++ L+VK  + G  FR
Sbjct: 67  --TLSSFKQKHALLTSLGVDEHLLINFNASFSQLTANTFIHEILLDKLKVKLCLVGDDFR 124

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG ++ GD  +LQ     + F       +  N  + VSSS IR +L KG+   A  LLG 
Sbjct: 125 FGSNQTGDFSLLQT----FNFEVEKTPTVLYNLDR-VSSSKIRQSLKKGNFYLANQLLGR 179

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +F+I   +IH +K GRT+GFPT N+ +   I    G++A+      +  Y+GV N G+ P
Sbjct: 180 KFSISGKIIHCQKQGRTIGFPTINIPIKRKISPLLGIFAVNVELNGKI-YNGVCNLGKRP 238

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T V    +LLE F+FDF++++YG+   V F   +R E KF     LK  +  D K A+
Sbjct: 239 T-VGGETILLEVFLFDFNKQVYGEYTKVIFKYKIRDEQKFNSFLALKEQIKLDVKNAK 295


>gi|297566071|ref|YP_003685043.1| riboflavin biosynthesis protein RibF [Meiothermus silvanus DSM
           9946]
 gi|296850520|gb|ADH63535.1| riboflavin biosynthesis protein RibF [Meiothermus silvanus DSM
           9946]
          Length = 296

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 153/291 (52%), Gaps = 15/291 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVAIG+FDG+HLGH  +L QA++ A   + P+ V +F+P  +  ++    +  L+  +  
Sbjct: 16  VVAIGSFDGLHLGHQHLLRQALREAKALHMPLLVYTFDPPSKVFMKGEGFLTDLTEKT-- 73

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L ++G    +   F    A  S E F+Q +    LE K +  G  FRFGK RAG   
Sbjct: 74  -ELLRELGVEIALIVPFNETFAQRSKEDFLQDL--RGLEAKEIYVGEDFRFGKGRAGGLE 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ            I  L       V SS IR  L +G V     LLG  +     V+ 
Sbjct: 131 DLQS------VAPTKILPLLELFESPVKSSRIRDLLREGKVEEVQPLLGRPYAARGIVVE 184

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K GRTLG+PTAN++++P  +L  GV+A+R RT  Q +Y GVAN G  PT V    L  
Sbjct: 185 GDKRGRTLGYPTANLEVAPGKVLPLGVFAVRARTA-QGTYGGVANIGHRPT-VDGHTLRF 242

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  +FDF  ++YG+   V F   +R E KF  +E+LK  +  D ++AR+ L
Sbjct: 243 EVHLFDFRGDLYGEDMKVEFLKKIRDEKKFSTLEELKAQIERDAEEARRYL 293


>gi|121606118|ref|YP_983447.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Polaromonas
           naphthalenivorans CJ2]
 gi|120595087|gb|ABM38526.1| FMN adenylyltransferase [Polaromonas naphthalenivorans CJ2]
          Length = 341

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 165/346 (47%), Gaps = 30/346 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +F   +  Q  P       + IGNFDG+H GH  +L      A +   P   ++F PH
Sbjct: 1   MKIFRGYQHPQLAPE----CALTIGNFDGVHRGHQAMLALLKSEARHRGVPSCAVTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR    + +    L+P  I   ++K+  L+  G    +   F    A+ S + FIQ+VL+
Sbjct: 57  PRDYFAALARKPELAPARIATLRDKLGELDHCGIDQCVILPFNAHLASQSPDAFIQEVLL 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFG  RAGD  +L   G + GF    ++    + S+ VSSS +R A
Sbjct: 117 KGLGARYVLVGDDFRFGARRAGDYAMLDAAGVRLGFDVARMNSYEVSNSR-VSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L+ G +   A LLG  ++I   V+HG K+GR LGF T N++ S       G++A+     
Sbjct: 176 LSHGDMARVAALLGRHYSISGHVVHGRKLGRELGFRTLNLRFSHWKPAASGIFAVLVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPN----GPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRP 284
                 GVAN G  P++ P+    G +LLE+   D+     +QE YG+   V     L  
Sbjct: 236 AGQPVQGVANLGIRPSIDPDDVNGGRVLLETHCLDWPASLGAQEAYGKIIRVELLHKLHD 295

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPLS---------ERDRI 321
           E+K+  +E LK  + +D   AR     S+  S          RDRI
Sbjct: 296 ELKYDGLESLKTGIAKDCGDARAFFTQSFSASMHTETSRQTTRDRI 341


>gi|290474753|ref|YP_003467633.1| bifunctional flavokinase/FAD synthetase [Xenorhabdus bovienii
           SS-2004]
 gi|289174066|emb|CBJ80853.1| bifunctional: flavokinase; FAD synthetase [Xenorhabdus bovienii
           SS-2004]
          Length = 314

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 4/293 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   +  + +  P  V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLKHLKQEGLRSGLPTMVMIFEPQPLEVFAVDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   L+  KF    A  S E F+ ++LVE L VK +  G  FRFGK+R GD
Sbjct: 76  DKIRYLSQYGVDYLLCVKFDRNFAANSPEAFVSRLLVEKLGVKFLAIGDDFRFGKNRLGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              LQ+ G++Y F     D   ++  +I SS+ IR AL    +  A  LLG+ ++I   V
Sbjct: 136 FHYLQQAGKQYCFDVASTDSFCDSGLRI-SSTAIRQALQDDDLALAETLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+   G  
Sbjct: 195 VHGKRLGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGDKPLPGVANIGNRPTVAGLGQ- 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            LE  + D   ++YG+   V     LR E +F  ++ LK  +  D   AR  L
Sbjct: 254 QLEVHLIDTQMDLYGRHIDVVLRKKLRDEQRFASLDALKQQIANDVVAARDCL 306


>gi|238786670|ref|ZP_04630471.1| FMN adenylyltransferase [Yersinia frederiksenii ATCC 33641]
 gi|238725038|gb|EEQ16677.1| FMN adenylyltransferase [Yersinia frederiksenii ATCC 33641]
          Length = 295

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  AKYLAEAGIDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFH 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDAGLRI-SSTAIRQALNDDDLVLAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTMGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|239636250|ref|ZP_04677252.1| riboflavin biosynthesis protein RibF [Staphylococcus warneri
           L37603]
 gi|239597605|gb|EEQ80100.1| riboflavin biosynthesis protein RibF [Staphylococcus warneri
           L37603]
          Length = 323

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + + H I+ +Q +  ++    +A G FDG+H GH  + +   + A +  +   V++F+PH
Sbjct: 4   IEITHPIQEDQRINENV---AMAFGFFDGMHKGHDKVFQTLDQQAQSRGLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++       T L+P S +  ++        I   F+   AN ++E+FI++ +++   
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKIDMIASHDVDYCIVINFSSRFANVTSEEFIEEYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALT 175
           VK VI G  F FGK   G+  +L    E   F+T  +   EL + K   +S++ IR AL 
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLN---EVDSFNTTIVGKQELDDEK---ISTTAIRDALQ 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-Q 233
            G +  A   LGY + I+  V+ GEK GRT+GFPTAN+  S D LL K+GVYA+      
Sbjct: 174 NGELQKANEELGYLYKIKGTVVQGEKRGRTIGFPTANVHPSDDYLLPKKGVYAVSMEIGT 233

Query: 234 DQTSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +Q  Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPEIKF  I
Sbjct: 234 EQKLYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVVVYWHHFLRPEIKFDGI 293

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L   M +D+ +A+ +L   +
Sbjct: 294 DPLVEQMNDDKARAKYLLSVDF 315


>gi|150003868|ref|YP_001298612.1| putative riboflavin kinase [Bacteroides vulgatus ATCC 8482]
 gi|149932292|gb|ABR38990.1| putative riboflavin kinase [Bacteroides vulgatus ATCC 8482]
          Length = 306

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 164/304 (53%), Gaps = 11/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A    +   +++F  HPR +IQ++ 
Sbjct: 9   HQTLP----PSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVHPRQVIQTAY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P+ + ++LE M         FT E + +SA +F+Q +L     + T++ G   
Sbjct: 65  RPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+ +     + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGKI-SSSVIRQLLKEGEVSQAAKFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  ++G+ N G
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWAGMLNIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L   M +D +K 
Sbjct: 242 HRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIAQMHKDREKT 301

Query: 306 RKIL 309
            +IL
Sbjct: 302 ARIL 305


>gi|42523014|ref|NP_968394.1| riboflavin kinase / FAD synthase ribC [Bdellovibrio bacteriovorus
           HD100]
 gi|39575219|emb|CAE79387.1| riboflavin kinase / FAD synthase ribC [Bdellovibrio bacteriovorus
           HD100]
          Length = 314

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV IGNFDG+HLGH  ++E  ++ A     P  V +F+PHP  ++      + L  
Sbjct: 14  LAASVVTIGNFDGVHLGHQQLIENVVREAQYFGVPSVVYTFHPHPVKVLHPERATYRLFD 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              Q++  EK G   +I  +FT + A  + ++F+   +++ L  KT++ G  F FG DRA
Sbjct: 74  LKDQQEQFEKRGIENVIIEEFTRDFAKVTPQEFLDSYVLKQLNPKTLVVGHDFNFGADRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   L+K   + G   + I   +   + +VSS+ IR  L  G V  A  LL   + +  
Sbjct: 134 GNIPFLEKYCAEKGIRLIIIPPFQYEGA-VVSSTRIREHLKNGEVQKANDLLARTYYLRG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN- 253
            V  G + GRT+G PTAN+    + + ++GVY    +      +  + N G NPT   + 
Sbjct: 193 HVEKGFQRGRTIGVPTANVHPDVEFIPRQGVYCTLTKIGAHM-HPSITNIGVNPTFHESG 251

Query: 254 -GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            GP+ +E+ +FDF  ++YG    V    +LR E KF  IE+LK  +  D  +ARK  + 
Sbjct: 252 KGPVKIETHLFDFDAQLYGIEVEVYLLKFLRDEKKFSGIEELKNQIQNDMAEARKYFDE 310


>gi|256838639|ref|ZP_05544149.1| riboflavin biosynthesis protein RibF [Parabacteroides sp. D13]
 gi|298374087|ref|ZP_06984045.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_19]
 gi|256739558|gb|EEU52882.1| riboflavin biosynthesis protein RibF [Parabacteroides sp. D13]
 gi|298268455|gb|EFI10110.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_19]
          Length = 306

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 12/303 (3%)

Query: 15  NHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           + LKG   V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +     
Sbjct: 8   DRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPK 67

Query: 71  TLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            L+  S +EK+  LE  G    I   FT+E + +SA++FI  +L + L VKT++ G   R
Sbjct: 68  LLN--SFEEKLQQLETTGVDYCIVLDFTIELSRFSAKEFITSILAKSLHVKTLLIGYDHR 125

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG DR          G + G   V      +  +  VSSS IR  L  G+V  AA+LL Y
Sbjct: 126 FGHDRTDGFEQYVVYGTECGIE-VLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAYLLTY 184

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
            + +   ++ G K+GRTLGFPTAN+++     ++   GVYA+    + +  Y G+   G 
Sbjct: 185 PYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGE-RYKGMLYIGD 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+     + +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D     
Sbjct: 244 RPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVN 303

Query: 307 KIL 309
            +L
Sbjct: 304 NLL 306


>gi|82542641|ref|YP_406588.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii Sb227]
 gi|81244052|gb|ABB64760.1| putative regulator [Shigella boydii Sb227]
 gi|332090434|gb|EGI95532.1| riboflavin biosynthesis protein RibF [Shigella boydii 3594-74]
          Length = 313

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVY +      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYVVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|300743973|ref|ZP_07072993.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa M567]
 gi|311113223|ref|YP_003984445.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa ATCC
           17931]
 gi|300380334|gb|EFJ76897.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa M567]
 gi|310944717|gb|ADP41011.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa ATCC
           17931]
          Length = 321

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 9/310 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPI 69
            +P      VV IGNFDG+H+GH  ++ + +++AN   +    +SF+PHP  +       
Sbjct: 9   DIPADFGPSVVTIGNFDGVHIGHARVISRVVEVANEHGLVSVAVSFDPHPMQVHHPELKH 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +     +   + ++G    +   + LE A  S E+F++ V V+ L  + V+ G   RF
Sbjct: 69  QEIMGQGSRRYFMCQLGLQNYLLLHYDLEFAKQSPEEFVKSVFVDTLRARYVVIGDDVRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G   +GD   +++ G+KYGF  + +D+L  ++    SS+ IR  L  G +  AA LLG  
Sbjct: 129 GHKNSGDLNTMRELGKKYGFEVIVVDDLMADEKTRCSSTRIREYLNAGDMEGAARLLGRP 188

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNP 248
             +  +V+HG   GR LGFPTAN++L     +  +GVYA     +    +    + G NP
Sbjct: 189 HLMYGEVVHGLARGRELGFPTANLELEARGFIPVDGVYAGWLTDESGEKHPAAISVGTNP 248

Query: 249 TMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           T        +E+ + +  QE      +YGQ   V F  +LRP + +  I+ L   + +D 
Sbjct: 249 TFDGIENRQVEAHVINRPQERVEDFDLYGQHVVVEFVKHLRPMVAYHGIDALIEQINQDV 308

Query: 303 KKARKILESS 312
            +AR +L + 
Sbjct: 309 AQARDVLAAG 318


>gi|194014476|ref|ZP_03053093.1| riboflavin biosynthesis protein RibF [Bacillus pumilus ATCC 7061]
 gi|194013502|gb|EDW23067.1| riboflavin biosynthesis protein RibF [Bacillus pumilus ATCC 7061]
          Length = 321

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 175/312 (56%), Gaps = 15/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           +H+ H   +NQ   +     V+A+G FDG+HLGH  +++ A  IA      + V++F+PH
Sbjct: 4   IHISHPHTLNQKDQD---PSVMALGYFDGVHLGHQKVIDAAKSIARKEGLALAVMTFHPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++Q +  P   ++P   +   +E++G   L   +F+   A  S ++F+ + L E L 
Sbjct: 61  PSHVLQKAREPKDLITPLEDKIDFIEQLGADYLYIVQFSESFAALSPQEFVDQYLDE-LN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK  + G  F FG+  AG      + G+     T+ + +L +N+ + VSS+ IR+AL  G
Sbjct: 120 VKHAVAGFDFTFGRFGAGTMETFDEYGKGRIMATI-VPKL-SNQDRKVSSTLIRSALKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            V   + LLG  + +   VIHG+K GRT+GFPTAN+ LS + I+   GVYA+R   + + 
Sbjct: 178 DVEYVSELLGKPYQLRGIVIHGDKRGRTIGFPTANVGLSAEYIIPPTGVYAVRAEVKGKV 237

Query: 237 SYSGVANFGRNPTMV---PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Y GV N G  PT     P+ P  +E  +FDF++EIYG+   + +F  +R E KF  I++
Sbjct: 238 -YDGVCNVGYKPTFYEKRPDQP-AIEVNLFDFNEEIYGEPIKLQWFKRIRSEQKFNGIQE 295

Query: 294 LKIYMGEDEKKA 305
           L   + +D+++A
Sbjct: 296 LTAQISQDKEEA 307


>gi|238758978|ref|ZP_04620149.1| FMN adenylyltransferase [Yersinia aldovae ATCC 35236]
 gi|238702789|gb|EEP95335.1| FMN adenylyltransferase [Yersinia aldovae ATCC 35236]
          Length = 295

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 152/297 (51%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +  +    P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGLRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L ++G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  
Sbjct: 61  ARYLAEVGVDYLLCVKFDPRFAAITAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    +  A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHNDDLALAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGRHIDVVLCAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|227549060|ref|ZP_03979109.1| FAD synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078842|gb|EEI16805.1| FAD synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 330

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 21/326 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P  L   VV IG FDG+H GH L++ +A+  A     P  V++F PHP  I      
Sbjct: 8   RQVPEALGATVVTIGVFDGVHRGHQLLISEAVVRARELGLPCVVMTFEPHPVAIFAPERA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L P S + +++E++G   L+   F  E A  S E +++ VL   L  +TV+ G  F 
Sbjct: 68  PKALIPLSERARLIEQLGVDYLVVIDFREELAGDSPEMYVRDVLAGVLGARTVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGKD AG    +++ G+ YG   V + EL N+    V S+ +R  L +G V  AA  LG 
Sbjct: 128 FGKDAAGTAATMRELGKAYGIEVVTV-ELLNDAGVRVCSTAVREELDRGDVRVAADFLGR 186

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTS-------- 237
            F +   +  G  + GR LG+PTAN Q   DI  L  +GVYA      D           
Sbjct: 187 EFAVTGVIERGAGRGGRELGYPTAN-QYVADISALPADGVYAGWLTVVDGAEKGPIVGDM 245

Query: 238 -----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                Y    + G NPT   +    +ESFI D   ++YG+   V F   +R  +KF  ++
Sbjct: 246 EPGVRYPAAISVGTNPTF-GDARRSVESFILDRDADLYGRLARVEFVGKVRDMVKFDSVD 304

Query: 293 KLKIYMGEDEKKARKILESSYPLSER 318
           +L   M  D +  R+IL +     ER
Sbjct: 305 ELLESMARDVETTRRILAADPKNPER 330


>gi|308176812|ref|YP_003916218.1| bifunctionnal riboflavin kinase/FAD synthetase [Arthrobacter
           arilaitensis Re117]
 gi|307744275|emb|CBT75247.1| bifunctionnal riboflavin kinase/FAD synthetase [Arthrobacter
           arilaitensis Re117]
          Length = 317

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 170/322 (52%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           MH +  ++   ++P  +   VV IGNFDG+HLGH  +L+ A+    A ++    ++F+PH
Sbjct: 1   MHYWKGLD---AVPADMAPTVVTIGNFDGVHLGHCEVLDAAVTQAKARSAQSVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       +   + +   L  +G  A +   +TLE A+ SAE F++ ++VE L  
Sbjct: 58  PALVHRPDDAPELIMGIADRVDTLASVGLDATLMIHYTLEFADQSAEDFVRSIIVEKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G   RFG   +GD   +Q+ G KYGF  + ++++ + +   +SS+ +R  L  G+
Sbjct: 118 VAVVVGHDVRFGHGNSGDFSYMQELGTKYGFDVIGVEDVGDKRR--LSSTWVREELAAGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQ 235
           V  AA +LG    +  +V+HG   GR LGFPTAN  L P+   I+  +GVYA     + +
Sbjct: 176 VEAAAAILGRPHRMRGEVVHGHARGRELGFPTAN--LDPEATGIIPADGVYAGWVIDEAE 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFK 289
             +    + G NPT       ++E+ + D  +E      +YGQ+  V F  +LRP + ++
Sbjct: 234 VRWPAAISVGSNPTF-EGVKRVVEAHVIDRPEEGVEDFDLYGQQIVVEFISHLRPMVAYR 292

Query: 290 DIEKLKIYMGEDEKKARKILES 311
            IE L   M ED  +AR +L +
Sbjct: 293 GIEALIEQMTEDVDQARAVLAT 314


>gi|317050558|ref|YP_004111674.1| riboflavin biosynthesis protein RibF [Desulfurispirillum indicum
           S5]
 gi|316945642|gb|ADU65118.1| riboflavin biosynthesis protein RibF [Desulfurispirillum indicum
           S5]
          Length = 312

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 165/307 (53%), Gaps = 9/307 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSS 66
           I+Q  P   +  V+ IGNFDG+HLGH  + E+ +  A+   SP   LSF+PHP  ++   
Sbjct: 7   IDQVPPGRYQCPVLTIGNFDGVHLGHRRVFERLLASADETGSPALCLSFDPHPLKVLGRR 66

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                +S    +EKI  +  +G + LI + F ++ A    ++F+++VL+E L ++ ++ G
Sbjct: 67  DLKLLISR---EEKIQVIRSLGVNGLILHPFDMDFAALEPQRFVEQVLLEKLGIRKLVVG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG++RAGD    +   ++ G   V I E  +    IVSSS IR  +  G +   A 
Sbjct: 124 YDYAFGRNRAGDHHFFRHLRQQ-GLLDVEIVEPVSVDGTIVSSSLIRQLVQDGDMSAVAR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG  + +   V+ G+  G+ +GFPTAN+    +IL   GVYA   R  ++ S+  + N 
Sbjct: 183 YLGRPYCLSGTVVEGDMRGKKIGFPTANLAYIQEILPPTGVYATVARVGNK-SFVALTNI 241

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT V    + +E+ I DFS+ +YG    + F + +R E+KF   + L   + +D + 
Sbjct: 242 GYNPTFVERRVVSVETHILDFSRNLYGFPLELLFLERIRGEVKFASAQDLIAQIHKDIEH 301

Query: 305 ARKILES 311
            R+ ++S
Sbjct: 302 TRQRIDS 308


>gi|224824630|ref|ZP_03697737.1| riboflavin biosynthesis protein RibF [Lutiella nitroferrum 2002]
 gi|224603123|gb|EEG09299.1| riboflavin biosynthesis protein RibF [Lutiella nitroferrum 2002]
          Length = 311

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 12/300 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L    + IGNFDG+H+GH  +L +  A   A + P  +L+F PHPR     S P   LS 
Sbjct: 13  LPACALTIGNFDGVHMGHQNMLARLRAEADARDLPAALLTFEPHPREFFARSQPPARLS- 71

Query: 75  PSIQEKIL--EKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            ++++K+L   ++G    L  Y+F    +  +A+ F+ +VLVE L+ + ++ G  F+FG 
Sbjct: 72  -TLRDKVLFLRQLGLIDYLFVYRFNHGFSRMAAQDFVGQVLVEQLQARYLLIGDDFQFGA 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR GD  +L       GF T  +  +   + +  SS+ +R  L  G +  A  LLG  + 
Sbjct: 131 DRKGDFQLLSA---CPGFVTEAMPSVLV-QGERASSTRVRECLAGGDLAAAERLLGRPYQ 186

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           +   V+HG+K+GRT+GFPTAN+ L       +GV+ +   T D     GVA+ G NPT+ 
Sbjct: 187 LSGRVMHGKKLGRTIGFPTANVHLPHRKPALQGVFVVEVDTPDGRK-GGVASLGLNPTVS 245

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 LE  +FD++ ++YG+R +V F   LR E ++ ++ +L   +  D   A+  L S
Sbjct: 246 TTPDYKLEVHLFDYAGDLYGRRLSVRFLKKLRDEERYDNLTELVAQIEHDAASAKTYLTS 305


>gi|297537730|ref|YP_003673499.1| riboflavin biosynthesis protein RibF [Methylotenera sp. 301]
 gi|297257077|gb|ADI28922.1| riboflavin biosynthesis protein RibF [Methylotenera sp. 301]
          Length = 298

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 158/311 (50%), Gaps = 23/311 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +F +I   Q  P  L     AIGNFDG+HLGH  +L++  + A    +T  V++F PH
Sbjct: 1   MQIFRHIPAQQQQPCAL-----AIGNFDGMHLGHQALLKKLNETAKALNLTSAVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      +    LS  S++EK+    + G       +F    A  + ++F+Q +L + L
Sbjct: 56  PREFFAPETAPARLS--SLREKLEHFAEAGVETTYVCRFNRRLAKLTPQEFMQNILRDSL 113

Query: 117 EVKTVITGTKFRFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             + ++ G  FRFG  RAG     L+ +        V +D  R      VSS+ +R+AL 
Sbjct: 114 NAQAILVGDDFRFGAMRAGSILDFLEAKFNLISLPQVDLDGAR------VSSTRVRSALA 167

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G +  A+ LLG  +++   V+HG K+GR LGFPTAN+ +  +     GVYA++      
Sbjct: 168 TGALHEASVLLGRPYSMSGKVVHGAKLGRQLGFPTANVHMRHERPALTGVYAVKL----- 222

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              + VAN G  PT+     L+LE  + DF+ ++YGQ   V F   +R E KF  ++ LK
Sbjct: 223 DGMNSVANLGVRPTIAGVSKLMLEVNVLDFNADLYGQHVHVEFLHKIRDEQKFDGLDALK 282

Query: 296 IYMGEDEKKAR 306
             +  D + AR
Sbjct: 283 TQIALDVESAR 293


>gi|237738346|ref|ZP_04568827.1| riboflavin kinase [Fusobacterium mortiferum ATCC 9817]
 gi|229420226|gb|EEO35273.1| riboflavin kinase [Fusobacterium mortiferum ATCC 9817]
          Length = 318

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 168/331 (50%), Gaps = 24/331 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V  NI     L  +L+   VAIG FDG+H GH  ++  A++ A  N     V +F+ H
Sbjct: 1   MRVIENI---FELEENLQESYVAIGTFDGVHYGHQKLIRNAVEKAKKNGGKSVVFTFSSH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  +I  S     ++  +I+EK+  LE MG   +I   F  E AN +A++F   +L E +
Sbjct: 58  PMELIDISRAPRVIN--TIEEKLYLLENMGVDCVILQSFIKEFANLTADEFAD-ILKEKV 114

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIR 171
             K +  G  F FG+        L + GE+ G        V++D        ++SS+ +R
Sbjct: 115 GSKEIFVGFNFSFGEGGKSKTKDLIRLGEERGILVHEIPAVYVD------GDLISSTFLR 168

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
             +    +      LG+RF I  +V+HG+KI R LGFPTAN+++S  +  K G+Y  R +
Sbjct: 169 NRILHADIAEINRYLGHRFLIMGEVVHGKKIARELGFPTANIKISTRLYPKNGIYGARVK 228

Query: 232 TQDQTSY-SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            + +  Y  GV N G NPT+ P G   +E  I DF + IYG+   V    YLR E KF  
Sbjct: 229 IEGEDFYRDGVVNIGVNPTLKP-GEKSVEVNILDFDEFIYGKIVAVELEQYLREEKKFSS 287

Query: 291 IEKLKIYMGEDEKKARKIL-ESSYPLSERDR 320
           I++LK  +G D K   K++ E     S +DR
Sbjct: 288 IDELKRVIGNDVKTWTKVVKERRNGYSTKDR 318


>gi|325921002|ref|ZP_08182885.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas gardneri
           ATCC 19865]
 gi|325548509|gb|EGD19480.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas gardneri
           ATCC 19865]
          Length = 334

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 153/285 (53%), Gaps = 5/285 (1%)

Query: 30  IHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +HLGH  +++ A++ A     P   +SF P PR     ++P   L+    + + L  +G 
Sbjct: 1   MHLGHRALMQHAVERARALGVPAVAVSFEPLPREFFAPAAPPPRLTLARAKIEGLYGLGA 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
            ++   +F    +  SAE F++  LV  L  K V  G +FRFG  R GD G+L+  GE+Y
Sbjct: 61  DSVGMIRFDGRLSAMSAEDFVRLALVGRLCAKEVWIGPEFRFGHRRGGDIGLLRALGEQY 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           GF    I  + + + + +S++ IR  L  G   +A  LLG  + I   V+ G+++GRTLG
Sbjct: 121 GFVAGEIAPV-HLRGERISATRIRELLGTGEFAHAGELLGRPYAIGGRVVRGKQLGRTLG 179

Query: 208 FPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ 267
           +PTAN++  P      G+YA       +  +  V++FG  PT+    P LLE+ +FDF  
Sbjct: 180 YPTANLRF-PRTPALSGIYATWVHGVAERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQG 237

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           ++YG+   V F   LR E KF  ++ L + M  D ++AR +L++S
Sbjct: 238 DLYGRHIEVEFVAKLRDEEKFDGLDALTVQMHRDAEQARAVLKAS 282


>gi|229588313|ref|YP_002870432.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens SBW25]
 gi|229360179|emb|CAY47036.1| riboflavin biosynthesis protein [Pseudomonas fluorescens SBW25]
          Length = 312

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 152/301 (50%), Gaps = 24/301 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVELG--VPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L + G   ++   F     + SA +F+ ++LV+ L V+
Sbjct: 59  REYFTPETAPARLARLRDKLQLLAEEGVDRVLCLAFNQRLQSLSAAEFVDRILVDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ  G   GF      TV +D LR      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGCDRVGDFDFLQHAGVNQGFTVEAAQTVELDGLR------VSSTQVRNAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 173 AAADFALAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI-D 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             S+ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E L
Sbjct: 232 GQSWPGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEAL 291

Query: 295 K 295
           K
Sbjct: 292 K 292


>gi|149369575|ref|ZP_01889427.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [unidentified eubacterium SCB49]
 gi|149357002|gb|EDM45557.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [unidentified eubacterium SCB49]
          Length = 310

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 163/303 (53%), Gaps = 15/303 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G VV IG FDG+H+GH  IL++  K A +  +   +L+F PHPR ++Q  + I  L   
Sbjct: 14  RGSVVTIGTFDGVHVGHATILKRLAKTAKDLDLDAVLLTFFPHPRMVLQKDTSIKMLHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++  +  +G   L+ + FT   +  +A ++++ +LV  L+ K +I G   RFG++RA 
Sbjct: 74  EEKKNHVAALGIQHLVIHPFTHGFSRLTATEYVRDILVNQLKAKKIIIGYDHRFGRNRAA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           D   L++ G+ Y F    ++E+   +     VSS+ IR AL +G +  A + LGY + I 
Sbjct: 134 DINDLKEFGKTYLFD---VEEITAQELDDVAVSSTKIRKALEQGDIETANNYLGYNYNIT 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
             +  G+ IGRTL +PTAN  L PD    ++ K GVY  +    ++  Y G+ + G NPT
Sbjct: 191 GTIEKGKAIGRTLDYPTAN--LKPDEAYKLIPKNGVYVTQATINEKAVY-GITSIGTNPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            V      +E++  DF   +Y  + T+SF  Y+R E  F  +  LK  +  DE  A+  +
Sbjct: 248 -VGGKTTTIETYFLDFEGNLYDLQITLSFLKYIRDEATFDGLPALKKAIAGDELFAKNFI 306

Query: 310 ESS 312
           ++ 
Sbjct: 307 KTC 309


>gi|293417900|ref|ZP_06660522.1| riboflavin biosynthesis protein RibF [Escherichia coli B185]
 gi|291430618|gb|EFF03616.1| riboflavin biosynthesis protein RibF [Escherichia coli B185]
          Length = 313

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 19  VLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 79  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 139 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 197

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 198 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 257 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|330501954|ref|YP_004378823.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina NK-01]
 gi|328916240|gb|AEB57071.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina NK-01]
          Length = 299

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 154/299 (51%), Gaps = 9/299 (3%)

Query: 21  VVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +V IGNFDG+H GH  IL    E+A ++A   P  V+ F P PR      +    L+   
Sbjct: 1   MVTIGNFDGVHRGHQAILARLRERAAELA--VPSCVVIFEPQPREYFGPDTAPARLTRLR 58

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +L   G   ++   F       SA +F+Q+VLV+ L VK +  G  FRFG DRAGD
Sbjct: 59  DKLALLAAEGVDMVLCLAFNRRLRELSAAEFVQRVLVDGLGVKDLEIGDDFRFGCDRAGD 118

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G+++GF +V            VSS+ +R AL  G    A  LLG  F I   V
Sbjct: 119 FEFLKAAGQRHGF-SVEASTTVEVLGGRVSSTRVRQALVDGDFELAEALLGRPFRIAGRV 177

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+K+GR L  PTAN+QL    +   GVY +     D     GVAN G  P++  +G  
Sbjct: 178 LHGQKLGRQLDAPTANIQLKRRKVPLTGVYLVSCEI-DGVIQPGVANIGVRPSVAGDGRA 236

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + DF+ ++YG+R +V+F   LR E +F  +E LK  +  D   AR   + S+PL
Sbjct: 237 HLEVHLLDFAGDLYGRRLSVAFHHKLRDEQRFASLEALKAAIAADIAAARDYWQ-SHPL 294


>gi|320159700|ref|YP_004172924.1| riboflavin kinase/FMN adenylyltransferase [Anaerolinea thermophila
           UNI-1]
 gi|319993553|dbj|BAJ62324.1| riboflavin kinase/FMN adenylyltransferase [Anaerolinea thermophila
           UNI-1]
          Length = 309

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 162/292 (55%), Gaps = 7/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +G+FDG+H GH  +L    + A+ +     V++F PHP  +++  S  + L+ P  + 
Sbjct: 17  LTVGSFDGVHRGHQGLLSALAQAAHQAGAQSAVVTFFPHPVAVLRGLSQPYYLTSPEERA 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++ + G   ++   FT E A  SA +F+  +L E   ++++  G  F  G++R G+   
Sbjct: 77  RLMGECGIDVVLTLPFTRELAALSAREFV-TLLREKAGMESLWVGYDFALGRNREGNVPA 135

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ GE+ GF TV +      +   VSSS IR AL +G V++AA +LG  +TIE  V+HG
Sbjct: 136 LQRLGEELGF-TVHVLPPVALEDIPVSSSLIRAALEQGDVVSAARMLGRPYTIEGAVVHG 194

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGPLL 257
           +  GRTL  PT N+    +  L   GVYA R   +       VAN G  PT   PNG + 
Sbjct: 195 DARGRTLNIPTINISFWAEQRLPAFGVYACRVEVEGLV-LDAVANIGIRPTFANPNGEVR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE+ + DFS ++Y +   + F  +LRPE +F+ +E L   + +D + AR++L
Sbjct: 254 LEAHLLDFSGDLYDRTVRLQFVAFLRPERRFESVEALVAQIQQDIQHAREVL 305


>gi|257066120|ref|YP_003152376.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii DSM
           20548]
 gi|256798000|gb|ACV28655.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii DSM
           20548]
          Length = 319

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 175/318 (55%), Gaps = 10/318 (3%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS 65
           ++N  LP+ L+   V++GNFDG+HLGH  +++  ++I+    +  +VL F  + +  ++ 
Sbjct: 9   DLNMDLPD-LEKKAVSLGNFDGVHLGHQKLMKNNLEISKKYDLEPSVLLFKENTKLRLKD 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                T     I+  IL +MG +      F  +  N S  +FI +++ + L    VI G 
Sbjct: 68  EKEYMTSLEDKIE--ILAEMGINTFCLIDFDEKFMNLSPREFIAEIINKKLNASFVICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFG+  +G+   L+K  ++Y + T  ++  + ++   +SS++IR  + +G++     L
Sbjct: 126 DYRFGRKASGNIETLRKLEDEYDYKTSVVEFEKEDEVNKISSNHIRDLIREGNISKVNKL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANF 244
           LG  + I+  V+ G K GRTL FPTAN++LS + +L  +GVY  +    D  S+  ++N 
Sbjct: 186 LGRNYKIKGRVVDGAKRGRTLNFPTANLKLSFNYVLPVDGVYFTKVNI-DGASFYALSNV 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT        +E++I DF+Q IYG+  ++ F ++ R +IKF   E L   M  D+KK
Sbjct: 245 GTNPTF-DESYRKVETYILDFNQNIYGKDISIEFVEFFRYDIKFDSKEALIEQMNSDKKK 303

Query: 305 ARKILESSYPLSERDRII 322
           A + LE+   L  +D ++
Sbjct: 304 AYEYLEN--ILQNKDELV 319


>gi|284044680|ref|YP_003395020.1| riboflavin biosynthesis protein RibF [Conexibacter woesei DSM
           14684]
 gi|283948901|gb|ADB51645.1| riboflavin biosynthesis protein RibF [Conexibacter woesei DSM
           14684]
          Length = 303

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 14/289 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG+HLGH  +      IA +   TVL+F PHP  +++  +    L+   ++ ++
Sbjct: 16  VAVGEFDGVHLGHRAV------IAGSD--TVLTFEPHPLAVVRPEAAPKLLTSLELKAEL 67

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +  +G   LI   F    A+ SA+ FI  VL+  L    V  G  FRFG    GD  +L+
Sbjct: 68  IAGLGVEELIVVPFDDAFAHQSAQAFIDDVLLAKLGATHVSVGENFRFGHGAKGDTALLR 127

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
               ++    V + E+   + +I+SSS++R  +  G V +A+  LG  F I   V HGEK
Sbjct: 128 AD-RRFEARVVPLVEI---EGEIISSSHVRGLVLAGEVEHASRFLGGSFRIRGTVAHGEK 183

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLLLE 259
            GR LGFPTAN++  P+++    GVYA R   +    +Y G  N G  PT      +L+E
Sbjct: 184 RGRELGFPTANLEPDPELVCPGHGVYATRVTWEGGGKTYCGATNVGVRPTFETGLGVLIE 243

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +F+ DF  ++Y ++ TV F   LR E +F   E+L   M  D   AR +
Sbjct: 244 AFVVDFDGDLYDKQLTVEFLRRLRGEQRFDSAEQLIEQMHRDVAAARTV 292


>gi|188590456|ref|YP_001920622.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188500737|gb|ACD53873.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 308

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 158/293 (53%), Gaps = 12/293 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           +N E  Q+  N+     VA+G+FDG+H+GH  ++++ I+IA  NN    V +F  HPR  
Sbjct: 6   NNFEDVQTYDNY-----VALGSFDGLHIGHLSLIDEVIRIARKNNGKSMVFTFKNHPRKF 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           I  ++ +  L     + K+LE  G        F  E    + ++FI K L   L +K ++
Sbjct: 61  INPNNTLKLLMENDDKIKMLEDKGIDIAYFANFNEEFMKITPKEFI-KFLCVNLNIKGIV 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  ++FG    GD  +L++  +KYG+    +D     K +++SS+ IR  L  G+V  A
Sbjct: 120 VGFNYKFGYKNLGDTKLLKELQKKYGYELHVMDSC-TYKDEVISSTRIRRELEAGNVSEA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGV 241
           + +L   + I+ +++HG +IGR +GFPTAN++ + D +L K GVY    R  ++  Y G+
Sbjct: 179 SIMLNRPYFIKGEIVHGREIGRIMGFPTANLKYNKDTILPKIGVYYTNVRVNNKI-YRGI 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            N G NPT V    + LE+ I DF  +IYG    V F   +R + KF  ++ L
Sbjct: 238 TNIGNNPT-VNGKEITLETNILDFDNDIYGNTIEVYFIKKIRDQKKFDSVDDL 289


>gi|289209716|ref|YP_003461782.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp. K90mix]
 gi|288945347|gb|ADC73046.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp. K90mix]
          Length = 320

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 12/297 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G VV IGNFDG+H GH  +L + ++ A +  +P  +++F P PR    S        PP 
Sbjct: 22  GAVVTIGNFDGLHRGHQAVLGRLLEAAQDRQAPSVLMTFEPLPREYFGSRPE--APDPPG 79

Query: 77  IQEKILEKM------GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
             +++ +++      G  A+   +F  + A  SA  FI++VL + L  + V+ G  FRFG
Sbjct: 80  RLQRLRDRLITLGDTGLEAVWILRFDAQLAGLSATAFIEEVLHQRLGAQHVLVGDDFRFG 139

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + R GD+ ++++ GE+ GF       + + + +I SS+ +R A   G     A LLG  +
Sbjct: 140 RGREGDQALMRREGERLGFSVEGTPTVADAEGRI-SSTRVRAAALAGDFTRMAELLGRPY 198

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            +   V HG+K GRT+GFPTAN+++ P  L   GVY+   R     +   VAN G  PT 
Sbjct: 199 RLHGRVAHGDKRGRTIGFPTANLRMGPWPLALRGVYSGWLRRASGDALPAVANIGWRPT- 257

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V      LE+ + + S ++YG+         +R E +F+ ++ L   +  D + AR+
Sbjct: 258 VAGTEQRLEAHVLEGSPDLYGEAVCFEPIARVRGEQRFEGLDALCAQIARDVETARE 314


>gi|297617192|ref|YP_003702351.1| riboflavin biosynthesis protein RibF [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145029|gb|ADI01786.1| riboflavin biosynthesis protein RibF [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 314

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 7/311 (2%)

Query: 7   IEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           + I + L N+ KG    +A+GNFDG+HLGH  +++  I+ A    +    L F PHP  +
Sbjct: 1   MRIIKGLENYHKGRPLSLALGNFDGVHLGHQKLIKLNIRDAKERGTIAAALIFEPHPLRV 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +        L   S + ++   +G   +I+  FTLE A    E F + VL E L V +V 
Sbjct: 61  LYPERTPRMLISTSRKIELFTLLGLEMVIQTPFTLEIARLIPEYFARHVLHETLGVASVS 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  + FG   AG    L+  GE+ GF    +  +   + Q+VSS+ +R AL  G +  A
Sbjct: 121 VGFNYTFGHKGAGTPETLKHLGEEIGFAVNVVPPVMVGE-QVVSSTLVRQALEAGDIDWA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGV 241
             LLGY   +E +VI GE+ G  +GFPTAN+++  D+++  EGVYA +   + +  ++ V
Sbjct: 180 YKLLGYWPMLEGEVIEGERRGGKIGFPTANLKIDEDLIVPGEGVYAAKALVRGEV-HNAV 238

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G+ PT     P+ +E++I DF + IYG+   + F   +R E+KF   E+L   + +D
Sbjct: 239 VNIGKKPTFHNTYPVTVEAYILDFHRIIYGETIRLYFLKRIRGEMKFSGAEQLVAQIHQD 298

Query: 302 EKKARKILESS 312
             +A+++L  +
Sbjct: 299 VTQAQRVLADT 309


>gi|294775025|ref|ZP_06740554.1| riboflavin biosynthesis protein RibF [Bacteroides vulgatus PC510]
 gi|294451069|gb|EFG19540.1| riboflavin biosynthesis protein RibF [Bacteroides vulgatus PC510]
          Length = 295

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 159/293 (54%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ Q  ++A    +   +++F  HPR +IQ++     LS P+ +
Sbjct: 5   VATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVHPRQVIQTAYRPQLLSSPTEK 64

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++LE M         FT E + +SA +F+Q +L     + T++ G   RFG +R+ +  
Sbjct: 65  LELLETMQVDYCFLLPFTQELSLFSAREFMQ-LLRNKFNIHTLVIGYDHRFGHNRSENFE 123

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + GE+   + V      + + +I SSS IR  L +G V  AA  LGY + ++  V+ 
Sbjct: 124 DYCRYGEELNIYIVRARAYTDKEGKI-SSSVIRQLLKEGEVSQAAKFLGYNYYLDGTVVD 182

Query: 199 GEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  ++G+ N G  PT+     L
Sbjct: 183 GYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWAGMLNIGHRPTINNGNNL 241

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  I +FS+ IY +   + F  YLRPE K+  I+ L   M +D +K  +IL
Sbjct: 242 SIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIAQMHKDREKTARIL 294


>gi|312888475|ref|ZP_07748048.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM
           18603]
 gi|311299052|gb|EFQ76148.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM
           18603]
          Length = 307

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 20/318 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++++I+  + + N     VV IG FDG+H GH  I+ +  ++A        +L+F PH
Sbjct: 1   MKIYNSIDEFKLITN----AVVTIGTFDGVHTGHRKIIAKLQELAQECGGETVILTFFPH 56

Query: 59  PRTII----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PR I+    QS   I T++  +   ++LE +G   LI   F+ + +N SA ++I  +LV 
Sbjct: 57  PRMILNPEDQSLKMITTINEKA---ELLEGLGVDHLIVTPFSRDFSNLSALEYIHDILVA 113

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            + +K ++ G   RFGKDR G    LQ+  + Y F  + I E   N    VSS+ IRTAL
Sbjct: 114 KIGIKKIVIGYDHRFGKDRKGGLEDLQRLSKIYDFEVIEIPEQDINDVA-VSSTKIRTAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRT 232
               +  A   L Y F I   VI G++IGR +G+PTAN+ +     ++  +G++A+    
Sbjct: 173 LSDDISLANQFLSYPFFITGKVIRGDQIGRQIGYPTANILIEETYKLIPADGIFAVTVEV 232

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +  T Y G+A  G  PT+  NG    +E  IFDF ++IY Q   ++F  ++R +IKF  +
Sbjct: 233 EGAT-YKGMAYIGHRPTI--NGMTRNIEVNIFDFDRDIYNQSIRMNFHYFVRSDIKFNSL 289

Query: 292 EKLKIYMGEDEKKARKIL 309
           ++LK+ + +D +    +L
Sbjct: 290 DELKLQLAKDRESVLALL 307


>gi|269137939|ref|YP_003294639.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Edwardsiella tarda EIB202]
 gi|267983599|gb|ACY83428.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Edwardsiella tarda EIB202]
 gi|304557989|gb|ADM40653.1| Riboflavin kinase / FMN adenylyltransferase [Edwardsiella tarda
           FL6-60]
          Length = 320

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 4/300 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L +  +       P+ V+ F P P  +    +    L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHRALLARLRQEGERLGLPVMVMIFEPQPLEMFAPQNAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G  A++  +F  + A++SA+ F++ +LVE L VK ++ G  FRFG +R G
Sbjct: 75  RDKCRYLADAGVDAVLCVRFDRQFASHSAQDFVKHLLVERLGVKFLMIGDDFRFGAEREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ  G+ YGF TV          + VSS+ +R AL    +  A  LLG+ + I   
Sbjct: 135 DYHMLQAAGKAYGF-TVTNSLSFCVGDRRVSSTAVRHALRHDDLALAESLLGHPYRIAGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V    
Sbjct: 194 VVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGLTPLPGVANIGTRPT-VAGIR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   AR+    + P+
Sbjct: 253 QQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQIAQDVVAAREFFGLTTPV 312


>gi|310823685|ref|YP_003956043.1| Riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396757|gb|ADO74216.1| Riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
          Length = 307

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 167/319 (52%), Gaps = 27/319 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M VFH++    +    L GG +A+GNFDG+H+GH  +  +A +    S  T   F+PHP 
Sbjct: 1   MKVFHSV----AEARELAGGALALGNFDGVHVGHQALFAEARRHGVASAFT---FHPHPG 53

Query: 61  TIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            ++Q   +  + TL P  ++  + E  G SA +   F+ E A  SA  F ++ L++ L +
Sbjct: 54  KVLQPDLAPKLITLLPRKLE--LFEACGLSAAVVQPFSREYARTSAAAF-EEALLDELGI 110

Query: 119 KTVITGTKFRFGKDRAGDRGILQ----KRGEK-YGFHTVFIDELRNNKSQIVSSSNIRTA 173
           K+++ G+ F +G  R+G    L     +RG + +    V +D +      + SSS +R  
Sbjct: 111 KSLVVGSDFTYGAKRSGTVDTLAEAALRRGARVHKVAPVTVDGV------VASSSRVREY 164

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           + +G V  A  LLG  F ++  V+ G   GR +GFPTAN+    ++    GVYAIR R +
Sbjct: 165 ILEGRVGAAHRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVRVK 224

Query: 234 DQTS---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           ++ S     G AN G  PT      + +E+ + DFS ++YGQ   V F + LRPE +F  
Sbjct: 225 NEPSSPWRPGAANIGVKPTF-GGSEVTIEAHLMDFSGDLYGQELRVQFLERLRPEQRFGS 283

Query: 291 IEKLKIYMGEDEKKARKIL 309
           + +L   +  D + AR ++
Sbjct: 284 VAELTGQIKRDVEAARTVI 302


>gi|206603981|gb|EDZ40461.1| Riboflavin kinase / FAD synthase (RibC) [Leptospirillum sp. Group
           II '5-way CG']
          Length = 319

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 6/301 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDGIH GH  +L   ++ +  +    TVL+F+PHP  ++    P   +     ++
Sbjct: 22  LTIGNFDGIHQGHQKLLNDLVEYSRKTKTLATVLTFDPHPLMVLSPEIPFQRIMSIPHKK 81

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           KIL ++G   L+   FT +      E FI+ +L+E+  +K ++ G  FRFG  RAG    
Sbjct: 82  KILSELGIDLLVITPFTPDLGRMEPETFIRDILLEYFPLKGLVIGEGFRFGHKRAGSVAD 141

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            Q+     G     I  + +   + VSSS IR  L  G V  A   L   F ++  V  G
Sbjct: 142 FQRVLSPEGVLVKAIPAVEDATGR-VSSSRIRELLRAGRVKEANQFLTRPFQLDGTVEEG 200

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           EK GR LGFPT N+  +PD LL   GVY  R +T  +  ++G +  G+ PT  P    ++
Sbjct: 201 EKRGRKLGFPTLNIHPTPDRLLPASGVYVTRTKTS-KGWFNGTSYVGKKPTFTPLMQPVI 259

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           E+ +FDFS  +YGQ   V F ++LR +  F   E L   +  D ++++     + P+S+ 
Sbjct: 260 ETHLFDFSDTLYGQYIQVDFLEFLRGDRAFPGPEALIAAISNDLQQSKDYFREN-PISQG 318

Query: 319 D 319
           D
Sbjct: 319 D 319


>gi|161504825|ref|YP_001571937.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160866172|gb|ABX22795.1| hypothetical protein SARI_02949 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 312

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 151/293 (51%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LV  L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVARLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQ  G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 134 GDFLLLQTAGAEYGFAVSSTQTFCEGGMRI-SSTAVRQALAEDNLALAESLLGHPFTISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 193 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 252 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 304


>gi|88858004|ref|ZP_01132646.1| bifunctional protein [Pseudoalteromonas tunicata D2]
 gi|88819621|gb|EAR29434.1| bifunctional protein [Pseudoalteromonas tunicata D2]
          Length = 306

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/293 (35%), Positives = 152/293 (51%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+HLGH  +L   I  A     P TV+ F P P+     ++    L+  
Sbjct: 15  RGCVLTIGNFDGVHLGHVAVLNGLIADAKRLGLPSTVMLFEPQPQEFFAKNNAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L+K+G   +I  +F    A  + E F+  +L + L VK +  G  F+FG +R+G
Sbjct: 75  RDKLTLLKKIGIERVICIQFNATFAKLAPEYFVDVILHQKLGVKALTVGDDFKFGINRSG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ+ GEK           R   S+ VSS+ IR +L       A  +LG+ ++I   
Sbjct: 135 DFNLLQQLGEKLNISVQNTASFRQQNSR-VSSTAIRKSLENADFAAAQQMLGHSYSISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG- 254
           VIHG K GR LGFPTAN+ L   +    GV+A+   T +     GVAN G  PT+  NG 
Sbjct: 194 VIHGWKKGRELGFPTANIALKRQVSPLHGVFAVSVATANGI-LRGVANIGCKPTL--NGK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LLE  +FDFS ++YG+  +V     LR E KF  +  L   +  D K A++
Sbjct: 251 TTLLEVHLFDFSGDLYGKFISVEIVKKLRDEQKFDTLAHLISQIQADVKIAKQ 303


>gi|304396520|ref|ZP_07378401.1| riboflavin biosynthesis protein RibF [Pantoea sp. aB]
 gi|304356029|gb|EFM20395.1| riboflavin biosynthesis protein RibF [Pantoea sp. aB]
          Length = 309

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L +  +  +  + P+ V+ F P P  +         L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLSRLCEEGLKRHLPVVVMVFEPQPLELFAGDKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + + + G   ++  +F    A  SA++FI  +LV+ L+VK +  G  FRFG  R G
Sbjct: 75  REKLRYMAEAGVDKVLCVRFDRRFAALSAQRFISDLLVDKLDVKYLAVGDDFRFGAGRQG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF  V  +   +   +I SS+ +R AL    +  A  LLG+ FTI   
Sbjct: 135 DFLLLQKAGVEYGFEVVSTETFCDGGKRI-SSTAVRQALAADDLALAQSLLGHPFTISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRTLGFPTAN+ L   +   +GVYA+  +        GVAN G  PT V    
Sbjct: 194 VVHGDALGRTLGFPTANLPLRRSVTPVKGVYAVEVQGLTPEPLPGVANIGTRPT-VKGLR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             LE  + D + ++YG+   V     +R E +F  +E LK  +  D   AR+
Sbjct: 253 QQLEVHLLDINIDLYGRHIDVVLKQKIRNEQRFASLEALKEQIANDVVTARQ 304


>gi|119505894|ref|ZP_01627958.1| hypothetical protein MGP2080_07469 [marine gamma proteobacterium
           HTCC2080]
 gi|119458275|gb|EAW39386.1| hypothetical protein MGP2080_07469 [marine gamma proteobacterium
           HTCC2080]
          Length = 313

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 153/311 (49%), Gaps = 23/311 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
            +L +  +G  V +G FDGIHLGH  +L      A +  +  TV+ F P PR   +    
Sbjct: 8   HNLRSEHRGCAVTVGAFDGIHLGHQAVLTHLSSCARDRDLLSTVIVFEPLPREYFRPLE- 66

Query: 69  IFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
               +PP I        +L + G   ++  KF  E    SAE F+ +V VE L  + +  
Sbjct: 67  ----APPRITNFRERLALLARTGIDRVLVLKFNEELRGMSAEDFVSRVFVEGLGARYIAL 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGH 178
           G  FRFG  R GD   +++   K+ +      T+ I ++R      VSS+ IRTAL  G 
Sbjct: 123 GDDFRFGNSREGDYDYVRRLAAKFNYEVQPTGTLEIADIR------VSSTRIRTALADGQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
            + A  LLG  FT+   V HG K+GR LG PTAN++++       GV+A+R       + 
Sbjct: 177 FVEAQALLGRPFTMTGRVEHGRKLGRELGAPTANIRINRIRSPLSGVFAVRVDGPGLEAV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           + VAN G  PT+       LE  + D   ++YGQR  V F   LR EIK++ ++ LK  +
Sbjct: 237 AAVANVGTRPTVDDGLKANLEVHLLDRKCDLYGQRLEVRFLHKLREEIKYESLDALKEGI 296

Query: 299 GEDEKKARKIL 309
            +D   AR  L
Sbjct: 297 AKDIDNARHWL 307


>gi|38234051|ref|NP_939818.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium diphtheriae NCTC 13129]
 gi|38200313|emb|CAE49998.1| riboflavin biosynthesis protein [Corynebacterium diphtheriae]
          Length = 323

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           + ++H +E    +P  LK  V+ IG FDG+H GH  ++  A   A     P  +++FNPH
Sbjct: 4   VDIWHRLE---DIPADLKASVITIGVFDGVHRGHRTLVAAATDRAQALGVPSVLVTFNPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++++       L   + +  + E +G   +    FT E ++ S E+F   V+ + L  
Sbjct: 61  PLSVLRPDKMPPLLGTVNQRADLAESLGVDHMFAMNFTAELSHLSPEEFFCSVIKDKLNA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FG   AG    L+  GEKYG     +D L  N   +VSS+ IR+ L +G 
Sbjct: 121 QAIVVGKNFTFGYKAAGTTDTLKALGEKYGVEIYVLDLLTEN-GDVVSSTAIRSDLLEGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
           +  A   LG  F++  DV+ G  + G+ LGFPTAN+     I L E GVYA         
Sbjct: 180 IRRANWGLGREFSVHGDVVRGAGRGGKELGFPTANLYFPDSIALPEDGVYAGWLTVTSSA 239

Query: 237 S----------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ESF+ D   ++YG    V F D +RP +
Sbjct: 240 PIDGDMVRGVRYPAAISVGHNPTF-GDKRRSVESFVLDRHADLYGHSIVVEFVDRIRPMV 298

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
           KF  I++L + +  D  + R IL
Sbjct: 299 KFDGIDELLVAIENDVTQTRAIL 321


>gi|86134827|ref|ZP_01053409.1| riboflavin biosynthesis protein RibF [Polaribacter sp. MED152]
 gi|85821690|gb|EAQ42837.1| riboflavin biosynthesis protein RibF [Polaribacter sp. MED152]
          Length = 310

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 164/297 (55%), Gaps = 11/297 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  I+E+ +  A        +L+F PHPR ++Q  + I  ++  + + 
Sbjct: 18  VTIGTFDGVHFGHQKIIEKLVSEAKKEQKKSVLLTFFPHPRMVLQKDASIELINTINERA 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LEK G   LI + F+   +  +A +F++ +LV  L +  +I G    FGK+R G+   
Sbjct: 78  NLLEKTGLDYLIIHPFSRAFSRTTALEFVRNILVNQLNISKLIIGYDHHFGKNREGNITQ 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L +    Y F    ++E+  ++     VSS+ IR AL +G++  A H LGY F +  +V+
Sbjct: 138 LTEYSHLYDFK---VEEIPAQDIDDVSVSSTKIRRALHEGNLKTANHYLGYNFMLNGNVV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +G+K+G  +G+PTAN+ +  D  L  K GVY ++  T D+    G+ N G  PT+  N  
Sbjct: 195 NGKKLGGKIGYPTANIDIKEDYKLIPKTGVYVVK-STIDKEEVFGMMNIGNRPTVNGNHQ 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E   FDF++++Y Q  T+    +LR E KF+ ++ L   + +DE  AR  ++++
Sbjct: 254 -TIEVHFFDFNKDLYHQNLTIELLYFLRDEQKFESLDLLIHQLKKDEHIARDYIKNN 309


>gi|323489594|ref|ZP_08094821.1| riboflavin biosynthesis protein ribC [Planococcus donghaensis
           MPA1U2]
 gi|323396725|gb|EGA89544.1| riboflavin biosynthesis protein ribC [Planococcus donghaensis
           MPA1U2]
          Length = 316

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 166/324 (51%), Gaps = 21/324 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGV-VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
           M + H    NQ  P+   G + +A+G FDG+H GH  ++ +AIK A    I   V++F+P
Sbjct: 1   MEIIHLTYPNQVKPDSETGPLSLALGFFDGVHKGHQRVIGEAIKQAEQKGIKSAVMTFDP 60

Query: 58  HPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HP  ++      +F ++P   +  ILE M        +FT E A  + E+FI    +  L
Sbjct: 61  HPSLVLGGRKEEVFYITPMQQKMDILEDMNVDYCFIIRFTSEFAKLTPEEFIN-FFITGL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             K V  G  F FG    GD  ++++  E +YG   V I E      + +SS+ IR  L 
Sbjct: 120 NAKHVTAGFDFSFGCKGKGDMELMKQMSEDRYG---VTIAEKLEEGDEKISSTRIRELLK 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRT 232
           +G       LLG  F +   V++G+K GRT+GFPTAN++  P+   ++   GVYA++ R 
Sbjct: 177 QGETGKVCQLLGRPFRVLGTVVNGDKRGRTIGFPTANIE--PELGAVVPSRGVYAVKIRV 234

Query: 233 QDQTSYSGVANFGRNPTMVPNGP----LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           Q    Y+GV N G  PT   N P     ++E  + +F + IYG+   V + D +R E KF
Sbjct: 235 QGNV-YNGVCNIGYKPTF--NNPDVKKHVIEVHVLEFDKSIYGEMVEVEWHDRIRDEQKF 291

Query: 289 KDIEKLKIYMGEDEKKARKILESS 312
             IE+LK  +  D+K A +I   +
Sbjct: 292 SGIEELKAQIQRDKKTAEQIFSRT 315


>gi|302392344|ref|YP_003828164.1| riboflavin biosynthesis protein RibF [Acetohalobium arabaticum DSM
           5501]
 gi|302204421|gb|ADL13099.1| riboflavin biosynthesis protein RibF [Acetohalobium arabaticum DSM
           5501]
          Length = 307

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 159/293 (54%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDGIH GH  ++++ I  A+  N    + SF PHP +++  S     ++    +
Sbjct: 17  VAALGAFDGIHYGHQQLIDEVITTADRLNCKAALFSFKPHPLSVVAPSKAPPLITSWKQK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +ILE++G   +   +FT + A    + F++  LV  + V  V+ G  FRFG    GD  
Sbjct: 77  YRILEELGLDKVYLVEFTADFAKLDFKGFVRDYLVAGINVHKVVVGEDFRFGYQGLGDTI 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K G ++GF    ID +  + +++VSS+ IR  +  G +      L   ++IE  VI 
Sbjct: 137 KLKKLGAEFGFEVKVIDSVTID-NKVVSSTYIRELIEAGRLQEVKTYLTRNYSIEGKVID 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+K GR LGFPTAN++   D I+ K GVYA+ +   + T  +G A+ G  PT   +  L 
Sbjct: 196 GDKRGRELGFPTANLKPVADYIIPKSGVYAV-YVYLEGTKMAGAAHVGSCPTFNQD-ELS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E  IFDF  +IY ++  V F + LR E++F   + L   + +D  +A+ ILE
Sbjct: 254 IEVNIFDFDDDIYQEKIEVEFVEGLRSEMEFNSRDGLIKQIMKDIAEAKDILE 306


>gi|297571206|ref|YP_003696980.1| riboflavin biosynthesis protein RibF [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931553|gb|ADH92361.1| riboflavin biosynthesis protein RibF [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 331

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 167/331 (50%), Gaps = 22/331 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+H+   +  +P      V+ IG FDG+H GH  ++ + ++IA   N P   L+F+PH
Sbjct: 1   MQVWHS---SSDVPADFGASVLTIGIFDGVHRGHQEVVRETVRIARERNLPAVALTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    S +  ++  + + + LE  G  A+    +TL+ A  SAE F++  L+  L  
Sbjct: 58  PRLVHNPDSDVHLIASLADRLERLETAGMDAVFVQHYTLDYAQQSAEDFVEHQLIGMLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
             ++ G   RFGK+ AGD   L++ GE +G   V +D++ + +  +  SS+ +R  L  G
Sbjct: 118 VAIVGGEDIRFGKNNAGDADALRRLGEAHGTDIVILDDVCDEHGGRRWSSTWVRDLLRAG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE----GVYA---IRF 230
           +V   A +LG    I  +V HG K GR LGFPTAN+   P + + E    GVYA   +R 
Sbjct: 178 NVRKTAEILGRPHRIRGNVQHGFKRGRQLGFPTANL---PGVGVGEIPADGVYAGWLVRT 234

Query: 231 --RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIK 287
              TQ         + G NP         +E+ +   S   +YG+   + F DY+RP + 
Sbjct: 235 IPETQATEHLPAAISIGTNPQF-EGVERTVEAHVLGRSDLNLYGEEVAIDFIDYVRPMMS 293

Query: 288 FKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           F  +E+L   M  D + A  IL  S P++ R
Sbjct: 294 FDAVEQLLSQMDNDLRTAADIL--SVPVATR 322


>gi|312958881|ref|ZP_07773400.1| riboflavin kinase/FAD synthetase [Pseudomonas fluorescens WH6]
 gi|311286651|gb|EFQ65213.1| riboflavin kinase/FAD synthetase [Pseudomonas fluorescens WH6]
          Length = 318

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 152/301 (50%), Gaps = 24/301 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 13  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVELG--VPSCVVIFEPQP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L + G   ++   F     + SA +F+ ++LV+ L V+
Sbjct: 65  REYFAPETAPARLARLRDKLQLLAEEGVDRVLCLAFNQRLQSLSAAEFVDRILVDGLGVQ 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ  G   GF      TV +D LR      VSS+ +R AL
Sbjct: 125 HLEVGDDFRFGCDRVGDFEFLQHAGIAQGFTVEAAQTVELDGLR------VSSTQVRNAL 178

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 179 AAADFALAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI-D 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             S+ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E L
Sbjct: 238 GQSWPGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEAL 297

Query: 295 K 295
           K
Sbjct: 298 K 298


>gi|260893504|ref|YP_003239601.1| riboflavin biosynthesis protein RibF [Ammonifex degensii KC4]
 gi|260865645|gb|ACX52751.1| riboflavin biosynthesis protein RibF [Ammonifex degensii KC4]
          Length = 319

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 159/293 (54%), Gaps = 9/293 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTII--QSSSPIFTLSPPSI 77
           V +GNFDG+HLGH  ++E+  A   A      VL+F PHP  ++  Q + P+   S   +
Sbjct: 19  VGLGNFDGVHLGHRKLIERLVAWAAATGGIPAVLTFEPHPAMVLNPQKAPPLLLSS--EL 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +++ L ++G   L    FT E A+   E+F+ +VLV+ + VK V  G    FG+   G+ 
Sbjct: 77  KKRFLAELGVKVLFILPFTREFASLQPEEFVAEVLVKEMGVKAVFVGYNHTFGRGGKGNP 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L   GE+YGF    I ++  N    VSS+ IR  L KG V  A   LGY       V+
Sbjct: 137 ALLASLGERYGFKVEVIPQVVVN-GLPVSSTLIRHLLEKGEVEEARRYLGYYPLYMGTVV 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+  GR LGFPTAN++L   ILL   GVY +R R  ++  Y GVAN G  PT       
Sbjct: 196 AGDGRGRALGFPTANLELEKGILLPACGVYLVRARVLERNWY-GVANVGVLPTFGGREQP 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E F+FDF  E+YG +  VSF   LR E +F+  E+L   + +D  +AR+++
Sbjct: 255 RVEVFLFDFQGELYGLKMEVSFLRRLREERRFRSPEELVAQIQQDVARAREMI 307


>gi|115376302|ref|ZP_01463542.1| riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366727|gb|EAU65722.1| riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
          Length = 307

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 167/319 (52%), Gaps = 27/319 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M VFH++    +    L GG +A+GNFDG+H+GH  +  +A +    S  T   F+PHP 
Sbjct: 1   MKVFHSV----AEARELAGGALALGNFDGVHVGHQALFAEARRHGVASAFT---FHPHPG 53

Query: 61  TIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            ++Q   +  + TL P  ++  + E  G SA +   F+ E A  SA  F ++ L++ L +
Sbjct: 54  KVLQPDLAPKLITLLPRKLE--LFEACGLSAAVVQPFSREYAXTSAAAF-EEALLDELGI 110

Query: 119 KTVITGTKFRFGKDRAGDRGILQ----KRGEK-YGFHTVFIDELRNNKSQIVSSSNIRTA 173
           K+++ G+ F +G  R+G    L     +RG + +    V +D +      + SSS +R  
Sbjct: 111 KSLVVGSDFTYGAKRSGTVDTLAEAALRRGARVHKVAPVTVDGV------VASSSRVREY 164

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           + +G V  A  LLG  F ++  V+ G   GR +GFPTAN+    ++    GVYAIR R +
Sbjct: 165 ILEGRVGAAHRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVRVK 224

Query: 234 DQTS---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           ++ S     G AN G  PT      + +E+ + DFS ++YGQ   V F + LRPE +F  
Sbjct: 225 NEPSSPWRPGAANIGVKPTF-GGSEVTIEAHLMDFSGDLYGQELRVQFLERLRPEQRFGS 283

Query: 291 IEKLKIYMGEDEKKARKIL 309
           + +L   +  D + AR ++
Sbjct: 284 VAELTGQIKRDVEAARTVI 302


>gi|300724586|ref|YP_003713911.1| bifunctional flavokinase/ FAD synthetase [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631128|emb|CBJ91817.1| bifunctional: flavokinase; FAD synthetase [Xenorhabdus nematophila
           ATCC 19061]
          Length = 314

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 148/295 (50%), Gaps = 8/295 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           G V+ IGNFDG+H GH  +L    ++ +++    P  V+ F P P  +         L+ 
Sbjct: 16  GCVLTIGNFDGVHRGHQALLKHLKQEGLRLG--LPTMVMIFEPQPLEVFVPDKAPARLTR 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + K L + G   L+  KF    A+ S E FI ++LVE L VK +  G  FRFGK+R 
Sbjct: 74  LRDKIKYLAQNGVDYLLCVKFDKYFASNSPEAFISQLLVEKLGVKFLAIGDDFRFGKNRL 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD   LQ+ G +Y F     D   ++  +I SS+ IR AL    +  A  LLG+ ++I  
Sbjct: 134 GDFHYLQQAGNQYNFDVASTDSFCDSGFRI-SSTAIRQALQSNDLALAETLLGHPYSISG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG ++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+   G
Sbjct: 193 RVVHGNQLGRTIGFPTANLPLKRLVTPVKGVYAVEVHGLGDNPLPGVANIGNRPTVAGQG 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              LE  + D   ++YG    V     LR E +F  ++ LK  +  D   AR  L
Sbjct: 253 Q-QLEVHLIDAQMDLYGCHINVVLRKKLRDEQRFASLDALKQQIANDVVAARNYL 306


>gi|87123002|ref|ZP_01078861.1| hypothetical protein MED121_24069 [Marinomonas sp. MED121]
 gi|86161719|gb|EAQ63025.1| hypothetical protein MED121_24069 [Marinomonas sp. MED121]
          Length = 309

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 4/288 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+HLGH  IL++  ++A     P  ++ F P PR           +S    +
Sbjct: 18  VLTIGNFDGVHLGHQAILKRVKELAQKYQVPSCIMIFEPQPREYFAGMKAPGRISRLRDK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L++ G   ++   F  +     AE F Q +L   L V+ ++ G  FRFG DR GD  
Sbjct: 78  LRFLQEQGIDYVLCMPFNKKIQELDAEAFCQTILQNGLAVQHLVVGDDFRFGCDRQGDFS 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + G+++ F       + + + + +SSS +R +L +G ++ +  LLG+   +   V+H
Sbjct: 138 YLNEFGQRHQFAVENTPSVLSAEGKRISSSLVRESLAQGQMVKSEALLGHPVILSGRVVH 197

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K+GRTLGFPTAN+ L        GVYA++   Q   +Y GVAN G  PT+    P +L
Sbjct: 198 GQKLGRTLGFPTANVHLKIARPAMSGVYAVQLVKQG-VAYDGVANIGCRPTVNGVTP-IL 255

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           E  +F++   +Y     V F  Y+R E K   +++L   +  D++ A+
Sbjct: 256 EVHLFEYQGSLYDDYVLVHFCHYIREERKMSGLDELVKQIQCDKEAAQ 303


>gi|255994868|ref|ZP_05428003.1| riboflavin biosynthesis protein RibF [Eubacterium saphenum ATCC
           49989]
 gi|255993581|gb|EEU03670.1| riboflavin biosynthesis protein RibF [Eubacterium saphenum ATCC
           49989]
          Length = 307

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 6/291 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDG+H+ H  +++   K A   N    V +F  HP+  I  S  +  ++      
Sbjct: 15  VALGNFDGVHIAHVKLIDMIKKRARAFNLEACVFTFKNHPKEFIPGSEILKYINDTEKTM 74

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I E +G  +L+   F       S E F++ V+VE L  K V  G  +RFG +  GD  +
Sbjct: 75  EIFENLGIDSLVMVPFDEVLQRMSPEDFVKDVIVERLGAKYVCVGYDYRFGFEGKGDVSL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G+ YGFH   ID++ +     VSSS IR  + +G       LLG R+ I   V+HG
Sbjct: 135 LDRLGKTYGFHVDVIDKV-SVGGVTVSSSRIRKLIYEGDFEGVQKLLGRRYMIAGKVVHG 193

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLL 257
           + IGR LGF T N+    ++ +  +GVY  R R   ++  Y  + N G  PT      + 
Sbjct: 194 KSIGRKLGFRTLNIMPRENLCIPSDGVYVTRTRVAMKSKVYDSITNIGTAPTF-KGDAVS 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +E+ +FDF+++IYG    + F   +R EIKF   E+L   + ED + A+ I
Sbjct: 253 IETNVFDFNEDIYGDIVHIDFLKKIRDEIKFDTPEELSKQIAEDVRLAKDI 303


>gi|323356811|ref|YP_004223207.1| FAD synthase [Microbacterium testaceum StLB037]
 gi|323273182|dbj|BAJ73327.1| FAD synthase [Microbacterium testaceum StLB037]
          Length = 314

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 11/306 (3%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQA-IKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           +P      VVAIG FDG+H GH  ++++A +  ++ + +  ++F+ +P ++++       
Sbjct: 10  VPADFGPSVVAIGKFDGVHTGHRAVIDRARVDASDGAQVVAVTFDRNPLSVLRPDRCPPD 69

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +  P  +  +L++ G  A +   F    A   AE+F ++V+V+ L+ +TV+ G  FRFG 
Sbjct: 70  VIGPHQKLDLLDRAGVDATLLLTFDEALAAIPAEEFARRVIVDALKARTVLVGRDFRFGA 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              GD  +L + G  +GF    +D++R  +  + VSS+ IR AL+ G V  AA LLG   
Sbjct: 130 GGTGDPDLLTRMGAAHGFRVDVVDDVRAVHADRRVSSTWIREALSAGDVTTAARLLGRAP 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYA---IRFRTQDQTSYSGVANF 244
           ++  +V+HG K GR LG+PTAN  LSPD+   +  +GVYA   +      + SY    + 
Sbjct: 190 SVWGEVVHGLKRGRELGYPTAN--LSPDLEGFVPADGVYAGWLVDVEGGRRISYPAAISV 247

Query: 245 GRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NPT        +E+++ D +  ++YG    V F + +R    F  ++ L I M +D +
Sbjct: 248 GTNPTFDDVHARQVEAYVLDETDLDLYGHHVEVRFVERVRGMTAFDGVDALLIQMADDVE 307

Query: 304 KARKIL 309
           + R IL
Sbjct: 308 RTRAIL 313


>gi|254456521|ref|ZP_05069950.1| riboflavin biosynthesis protein RibF [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083523|gb|EDZ60949.1| riboflavin biosynthesis protein RibF [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 307

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 164/310 (52%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLI--LEQAIKIANNSPITVLSFNPH 58
           + ++ N  IN+   NH K  ++ IGNFDG+HLGH  +  L Q+ K   N  I V++F+P 
Sbjct: 2   VKLYKNFNINK---NH-KQSIILIGNFDGVHLGHQKLFKLAQSYKKKYNLKIGVINFDPM 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     S   F LS    +  +L   G   +I  +F    +   +  F++ +L + L  
Sbjct: 58  PKMFFNRSLTNFRLSSIDQKLVLLNNQGVDFIITKQFDKIFSKTKSINFVKNILSQKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +     FRFG  R GD  +L +  +++ F  V   +    K +IVSSS IR+ L +G 
Sbjct: 118 RFIFVSNNFRFGNKREGDVNLLIQNEKRFNFKVV-KPKPLLLKKKIVSSSLIRSYLERGF 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LL   ++IE  V  G +IG+ +GFPT N+ +   +L K GVYA++   ++ T Y
Sbjct: 177 LKEANKLLNRNWSIEGIVQKGRQIGKKIGFPTCNIDIGDYVLAKPGVYAVKVLRKNNTKY 236

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G+AN G  PT      +LLE  +F+FS  +Y +  +V F  ++R E KFK++ +LK  
Sbjct: 237 IKGIANLGYRPTF-NQKKILLEVHLFNFSGNLYNKYLSVEFLKFIRKEKKFKNVNQLKNQ 295

Query: 298 MGEDEKKARK 307
           +  D   A+K
Sbjct: 296 IKNDLSIAKK 305


>gi|301024768|ref|ZP_07188406.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 196-1]
 gi|299880258|gb|EFI88469.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 196-1]
 gi|320179582|gb|EFW54531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii ATCC 9905]
 gi|320190456|gb|EFW65106.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. EC1212]
 gi|320197534|gb|EFW72148.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli WV_060327]
 gi|320200459|gb|EFW75045.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli EC4100B]
 gi|323166069|gb|EFZ51848.1| riboflavin biosynthesis protein RibF [Shigella sonnei 53G]
 gi|326345259|gb|EGD69002.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. 1125]
 gi|332095310|gb|EGJ00333.1| riboflavin biosynthesis protein RibF [Shigella boydii 5216-82]
 gi|332098327|gb|EGJ03300.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 155-74]
 gi|332341355|gb|AEE54689.1| riboflavin biosynthesis protein RibF [Escherichia coli UMNK88]
 gi|333009408|gb|EGK28864.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-218]
 gi|333010516|gb|EGK29949.1| riboflavin biosynthesis protein RibF [Shigella flexneri VA-6]
 gi|333022391|gb|EGK41629.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-304]
          Length = 295

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|255013020|ref|ZP_05285146.1| putative riboflavin biosynthesis protein RibF [Bacteroides sp.
           2_1_7]
          Length = 306

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 156/301 (51%), Gaps = 8/301 (2%)

Query: 15  NHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           + LKG   V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +     
Sbjct: 8   DRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPK 67

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + + LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   RFG
Sbjct: 68  LLNSSEEKLQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFG 127

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            DR          G + G   V      +  +  VSSS IR  L  G+V  AA+LL Y +
Sbjct: 128 HDRTDGFEQYVVYGTECGIE-VLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAYLLTYPY 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            +   ++ G K+GRTLGFPTAN+++     ++   GVYA+    + +  Y G+   G  P
Sbjct: 187 QLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGE-RYKGMLYIGDRP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     + +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D      +
Sbjct: 246 TLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNL 305

Query: 309 L 309
           L
Sbjct: 306 L 306


>gi|260853235|ref|YP_003227126.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O26:H11 str. 11368]
 gi|257751884|dbj|BAI23386.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O26:H11 str. 11368]
          Length = 313

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 DFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  +   + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLGVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|332883725|gb|EGK04005.1| riboflavin biosynthesis protein RibF [Dysgonomonas mossii DSM
           22836]
          Length = 313

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  + A     P  V++F  HPR ++Q       L     +
Sbjct: 16  VATIGFFDGVHTGHRYLIDQVKEEAAKRGLPSAVITFPVHPRKVLQKDYQPALLCGYDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G    I   FT+E +  SA++F+Q +L E L V +++ G   RFG +R  D  
Sbjct: 76  IERLATTGIDYCICLDFTVEISQMSAKRFMQNILKEKLNVDSLVIGYDHRFGHNREDDFS 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++ G +     +    L   +   VSSS IR  L +G++  A  LL Y +TI   ++ 
Sbjct: 136 DYERYGSEIKMQVIEAKALPGLEH--VSSSRIRKLLAEGYIRKAGKLLSYNYTISGKIVE 193

Query: 199 GEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRT+GFPTAN+Q+  +  ++   G+YA+    +    Y G+   G+ PT+     +
Sbjct: 194 GFKVGRTIGFPTANIQIWETYKVVPAFGIYAVYVHVE-GVKYDGMLYIGKRPTLHNGDNI 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E  +FDF  ++Y +  T  F D++RP+ KF DI  LK  +  D++   K++E+
Sbjct: 253 SIEVNLFDFDGDLYNKTLTAEFLDFVRPDEKFSDIATLKDQISRDKETVIKVIEN 307


>gi|331269624|ref|YP_004396116.1| riboflavin biosynthesis protein RibF [Clostridium botulinum
           BKT015925]
 gi|329126174|gb|AEB76119.1| riboflavin biosynthesis protein RibF [Clostridium botulinum
           BKT015925]
          Length = 305

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 158/287 (55%), Gaps = 7/287 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++ + I++A  NN+   V +F  HP T+I +      +     + 
Sbjct: 18  IALGSFDGLHIGHMSLINKTIELAKKNNAKSMVFTFKNHPLTVINNDIAPKLIINNETKT 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LEK G   +    F       S E FI+ +L  +  VK +I G  +RFG    GD  +
Sbjct: 78  KLLEKAGIDIVNYANFDDIFMKISPEDFIENMLTHY-NVKGIIVGFNYRFGYKNLGDIDL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK   K GF    I+ +R N ++IVSS+ IR  +++G ++ A   L   F ++  V+HG
Sbjct: 137 LQKLSCKLGFELNIINPVRIN-NEIVSSTRIRQLISEGDIVKANTFLNRPFMLKGKVMHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GR + FPT N+      +L + GVY    +  ++  Y G+ N G NPT V +  L +
Sbjct: 196 KQLGRKMNFPTTNLDYDKKFVLPRGGVYYTSVKYNNK-KYKGITNIGYNPT-VKDEKLSI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           E+ I DF +EIY +   V F++ +R E KF  IE+L   + +D++ A
Sbjct: 254 ETHILDFKKEIYDEILEVYFYERIRDEKKFDSIEELANQLTKDKEYA 300


>gi|121535266|ref|ZP_01667080.1| riboflavin biosynthesis protein RibF [Thermosinus carboxydivorans
           Nor1]
 gi|121306151|gb|EAX47079.1| riboflavin biosynthesis protein RibF [Thermosinus carboxydivorans
           Nor1]
          Length = 311

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 159/289 (55%), Gaps = 9/289 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G FDG+H+GH  I+ +A+++A        V +F+ HP +I+        L     + 
Sbjct: 19  IALGTFDGVHIGHQRIIRRAVELARVAGGSSVVFTFSNHPLSIVAPERCPPLLLTQEDKA 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E++G   L+   FT      S  +F+  +LVE L    ++ G  + FG   AG    
Sbjct: 79  RLIEELGVDLLVSIPFTATFLRLSPYEFV-NLLVEHLSPVHIVVGPNYTFGYKSAGTPET 137

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G K GF +V I++      ++VSS+ IR+ +  G V  A   LG    +  +V+HG
Sbjct: 138 LKEIGAKAGF-SVQIEQAVCIDDKLVSSTYIRSLIAAGKVAEARKFLGRPPLLSGEVVHG 196

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           E  GR LG+PTAN++ +  +LL  +GVY +R    D   Y GVAN GRNPT   NG    
Sbjct: 197 EARGRILGYPTANIKTAEGMLLPADGVYVVRLLAGD-IHYDGVANVGRNPTF--NGQQRR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E F+F F   +YGQ  TV+F++ LR E+ F + ++LK  + +D + AR
Sbjct: 254 VEVFLFGFEGSLYGQTVTVTFWERLRGEMVFANADELKRQISQDIQLAR 302


>gi|212709128|ref|ZP_03317256.1| hypothetical protein PROVALCAL_00161 [Providencia alcalifaciens DSM
           30120]
 gi|212688040|gb|EEB47568.1| hypothetical protein PROVALCAL_00161 [Providencia alcalifaciens DSM
           30120]
          Length = 312

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 6/304 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSS 67
           Q++ ++  G V+ IGNFDG+H GH ++L Q +K+       P  V+ F P P        
Sbjct: 8   QNIRSYHHGCVLTIGNFDGVHRGHQVLL-QNLKLKGKQLGLPTVVMIFEPQPLEFFTGDK 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+    + K L   G   L+  +F    A+ + + F+  +LV+ L VK +  G  F
Sbjct: 67  APARLTRLRDKVKYLADSGVDYLLCVEFNQHFASLTPDAFVSDLLVDKLGVKYLAIGDDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFGK+R GD   LQ+ G+K+GF     +   ++  + VSS+ IR A+    +  A +LLG
Sbjct: 127 RFGKNRMGDFAFLQQAGQKFGFEVADTESFCDSGVR-VSSTAIRKAIQNNDLPLAENLLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           + + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+           GVAN G  
Sbjct: 186 HTYRISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVHGLGDKPVPGVANIGTR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+   G   LE  + D   ++YG+   V     LR E +F  ++ LK  +  D   AR+
Sbjct: 246 PTVSGKGT-QLEVHLIDAHMDLYGRHIDVVLRKKLRDEQRFASLDALKEQIANDVVAARE 304

Query: 308 ILES 311
            L +
Sbjct: 305 YLAA 308


>gi|150009685|ref|YP_001304428.1| putative riboflavin biosynthesis protein RibF [Parabacteroides
           distasonis ATCC 8503]
 gi|262383012|ref|ZP_06076149.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_33B]
 gi|149938109|gb|ABR44806.1| putative riboflavin biosynthesis protein RibF [Parabacteroides
           distasonis ATCC 8503]
 gi|262295890|gb|EEY83821.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_33B]
          Length = 306

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 159/303 (52%), Gaps = 12/303 (3%)

Query: 15  NHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           + LKG   V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +     
Sbjct: 8   DRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPK 67

Query: 71  TLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            L+  S +EK+  LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   R
Sbjct: 68  LLN--SFEEKLQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHR 125

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG DR          G + G   V      +  +  VSSS IR  L  G+V  AA+LL Y
Sbjct: 126 FGHDRTDGFEQYVVYGTECGIE-VLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAYLLTY 184

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
            + +   ++ G K+GRTLGFPTAN+++     ++   GVYA+    + +  Y G+   G 
Sbjct: 185 PYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGE-RYKGMLYIGD 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+     + +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D     
Sbjct: 244 RPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVN 303

Query: 307 KIL 309
            +L
Sbjct: 304 NLL 306


>gi|301307689|ref|ZP_07213646.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 20_3]
 gi|300834363|gb|EFK64976.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 20_3]
          Length = 306

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 159/303 (52%), Gaps = 12/303 (3%)

Query: 15  NHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           + LKG   V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +     
Sbjct: 8   DRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPK 67

Query: 71  TLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            L+  S +EK+  LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   R
Sbjct: 68  LLN--SFEEKLQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHR 125

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG DR          G + G   V      +  +  VSSS IR  L  G+V  AA+LL Y
Sbjct: 126 FGHDRTDGFEQYVVYGTECGIE-VLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAYLLTY 184

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
            + +   ++ G K+GRTLGFPTAN+++     ++   GVYA+    + +  Y G+   G 
Sbjct: 185 PYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGE-RYKGMLYIGD 243

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+     + +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D     
Sbjct: 244 RPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRRDIKFDSLEELKAQLEKDRCTVN 303

Query: 307 KIL 309
            +L
Sbjct: 304 NLL 306


>gi|242238038|ref|YP_002986219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dickeya
           dadantii Ech703]
 gi|242130095|gb|ACS84397.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech703]
          Length = 313

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 148/299 (49%), Gaps = 3/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH ++LE+  +   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQMLLERLKQEGRARGLPVMVMIFEPQPLELFAGEKSPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L + G   L+  +F    A   A  FI  +LV  L V+ ++ G  FRFG  R GD
Sbjct: 76  DKVKYLAQAGVDYLLCVEFDDTFAANHASTFISDLLVAKLGVRFLVVGDDFRFGAGRVGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +  F  +      N   + VSS+ +R AL +  ++ A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGAEQEFDVISTATFCNGGKR-VSSTAVREALMRDDLVLAEALLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GRT+GFPTAN+ L   +    GVYA+      +    GVAN G  PT+  +   
Sbjct: 195 VHGNELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGEHPLPGVANIGTRPTVTGDRRQ 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 255 QLEVHLLDVTMDLYGRHIDVVMRKKLRNEQRFASLDALKQQIANDVVAARAFFGLKTPV 313


>gi|210622617|ref|ZP_03293277.1| hypothetical protein CLOHIR_01225 [Clostridium hiranonis DSM 13275]
 gi|210154118|gb|EEA85124.1| hypothetical protein CLOHIR_01225 [Clostridium hiranonis DSM 13275]
          Length = 312

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 13/281 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRT--IIQSSSPIFTLSPPS 76
           VV IGNFDG+H GH +++E+    A    I   V +F  HP    + +    IF      
Sbjct: 17  VVTIGNFDGVHKGHQVLIEKTAAYAKARGIKSAVFTFLNHPINYFVPEKVKNIFDEKE-- 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+++E  G   LI   F       SAEQFI K+L + +  K ++ G  F F +++ G+
Sbjct: 75  -KERLIESFGIDYLIDIPFDKAMTQISAEQFIVKILKDKIHAKKIVVGHDFTFARNKEGN 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+  G +YG     +  ++ N  + VSS+ IR  +++G V      LG  + IE ++
Sbjct: 134 ADVLRDMGHEYGIEVEIVQPIKINGIR-VSSTFIRELISEGRVDEIPQYLGTHYVIEGEI 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHG+  GR +G+PTAN+ L   I+  K G+YA R    D   Y G  N G NPT+  NG 
Sbjct: 193 IHGKANGRKMGYPTANISLKDQIINPKNGIYASRV-IIDGKKYFGATNVGMNPTV--NGK 249

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            L +E+ I DF+++IYG+R  + F + +R E KF+ +++L+
Sbjct: 250 YLSIETNILDFNEDIYGKRVRIEFLEKIRDEKKFESLDELR 290


>gi|82775427|ref|YP_401774.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           dysenteriae Sd197]
 gi|81239575|gb|ABB60285.1| putative regulator [Shigella dysenteriae Sd197]
          Length = 313

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 4/299 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++   F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G
Sbjct: 76  REKLRYLAECGVDYVLCVHFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   
Sbjct: 136 NFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGR 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V    
Sbjct: 195 VVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIR 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 312


>gi|330909871|gb|EGH38381.1| riboflavin kinase / FMN adenylyltransferase [Escherichia coli AA86]
          Length = 295

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV  L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVRHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|91762712|ref|ZP_01264677.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718514|gb|EAS85164.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 305

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 164/303 (54%), Gaps = 13/303 (4%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQS 65
           ++ N+ K  ++ IGNFDG+HLGH    ++  K+AN      N  I VL+F P P+     
Sbjct: 8   NISNNHKKSIILIGNFDGVHLGH----QKLFKLANTYKKKFNLKIGVLTFEPMPKMFFNK 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           S   F +S  + ++ IL+ +G   +I  KF  + +   ++ FI+++L + LE + +    
Sbjct: 64  SFKNFRISNINQKKIILDHLGVDFIITKKFDKKFSAIKSDFFIKEILSKKLEAQYIFVSN 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG  R GD   L K   +Y +  V    L  NK +++SS+ IR+ L KG +     L
Sbjct: 124 NFRFGNKREGDVRQLIKNEGRYHYKIVKPQPLILNK-KVISSTYIRSLLEKGQLKKTNKL 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-SYSGVANF 244
           L   ++IE  V  G + G+ +GFPT N+ +   ++   GVYA++ + ++   S   +AN 
Sbjct: 183 LSRNWSIEGIVQKGRQQGKKIGFPTCNIDIKDYVIAMPGVYAVKVKQKNSNKSLKAIANL 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT      +LLE  IF+FS  +Y +  +V F  ++R E KFK++++LK  +  D K 
Sbjct: 243 GYRPTF-NQKKILLEVHIFNFSGNLYNKYLSVEFTKFIRKEKKFKNVDQLKKQIQSDLKV 301

Query: 305 ARK 307
           A+K
Sbjct: 302 AKK 304


>gi|116618445|ref|YP_818816.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097292|gb|ABJ62443.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 316

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 7/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  +L +A   A     P+ VL+++PHP    Q+   P+  L+P + 
Sbjct: 23  VVAMGFFDGVHRGHQAVLARAKAEAEKQGVPLAVLTYDPHPIVAFQTLKKPLRYLTPLAK 82

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ I+ ++G   +   +FT + A    +QF+ +V+++ L   TV+ G    +G       
Sbjct: 83  KKSIMRQLGVDRVYVMQFTSKLAKLGGQQFVDEVVMQ-LNPVTVVAGFDHLYGAAGTDSD 141

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +         F  + + E  ++ +Q VSSS IR+ L +G+V  AA  LG   +    V+
Sbjct: 142 MLHLATYATNRFDVITVSEF-DDYNQKVSSSTIRSMLDQGNVDGAAQQLGRVHSTSGIVV 200

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HGE  GR LGFPTAN+Q   +  L   G+YA++ +  D T Y G+A+ GRN T     P+
Sbjct: 201 HGEARGRELGFPTANIQTPEEEWLPGIGIYAVKIKVYD-TWYLGMASIGRNVTFGDARPI 259

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E  I D+ +EIYG+   + +  YLR E+KF++++ L   + ED ++ R
Sbjct: 260 TVEINILDYQEEIYGEFVQIQWCHYLRGEVKFENVQALIDQLNEDARQTR 309


>gi|254428562|ref|ZP_05042269.1| riboflavin biosynthesis protein RibF [Alcanivorax sp. DG881]
 gi|196194731|gb|EDX89690.1| riboflavin biosynthesis protein RibF [Alcanivorax sp. DG881]
          Length = 327

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 32/317 (10%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V  IGNFDG+H GH  IL+Q I  A    +  TV+ F P P+      +     +PP
Sbjct: 15  RGCVATIGNFDGVHQGHQRILDQVIAEARRRGLKSTVMLFEPQPQEFFSPQT-----APP 69

Query: 76  ---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              S+++K+  L + G   ++  +F     + +AE F++ +LV+ L V+ ++ G  FRFG
Sbjct: 70  RLMSLRDKLIALREAGVDQVLCVRFDERFRSLTAEAFVKALLVDGLGVEYLVVGDDFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   LQ+ G+++GF          +  + VSS+ +R AL  G    A  LLG  F
Sbjct: 130 CGRDGDFAYLQQAGQQFGFAVTDTATCEVDGER-VSSTRVRAALCDGDFALAERLLGRPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V HG+KIGRTLG PT N+ L        GV+A+           G AN G  PT+
Sbjct: 189 AISGRVRHGDKIGRTLGLPTVNLALKRLQSPLHGVFAVTVTGAGLVDQPGAANMGTRPTV 248

Query: 251 VPNGPL-LLESFIFDF----------------SQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             NG    LE ++ D+                   +YG   TV+F  Y+RPE KF D+++
Sbjct: 249 --NGTENRLEVYLLDYSDSAGGSGSGDTQRTHQDSLYGAHLTVAFRHYVRPEEKFADLDQ 306

Query: 294 LKIYMGEDEKKARKILE 310
           LK  + +D    R   +
Sbjct: 307 LKTAIRQDVDAVRAFFD 323


>gi|225075659|ref|ZP_03718858.1| hypothetical protein NEIFLAOT_00675 [Neisseria flavescens
           NRL30031/H210]
 gi|224953081|gb|EEG34290.1| hypothetical protein NEIFLAOT_00675 [Neisseria flavescens
           NRL30031/H210]
          Length = 308

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 169/317 (53%), Gaps = 21/317 (6%)

Query: 6   NIEINQS-LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           NI + Q   P   +G  V IGNFDG+HLGH  IL++  + A+    P+ V+ F P P+  
Sbjct: 2   NIWLGQRHAPKFPQGAAVTIGNFDGVHLGHKHILQKLKREADQRGLPVVVVVFEPQPKEF 61

Query: 63  IQSSSPI---FTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               +     + +SP   + ++L + G   A+    F    ++ SA+ FI ++L + L  
Sbjct: 62  FARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLCFNQAFSDMSAQAFIDQLLRQTLNT 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTK 176
           + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ 
Sbjct: 122 RYLLIGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSD 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +     D T
Sbjct: 176 GKLEYAKRLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVE---ADGT 232

Query: 237 --SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +  GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE L
Sbjct: 233 FGTRRGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIEAL 292

Query: 295 KIYMGEDEKKARKILES 311
           K  + +D + A K+ E+
Sbjct: 293 KTQILQDMEDA-KVWEA 308


>gi|319638560|ref|ZP_07993322.1| riboflavin kinase/FMN adenylyltransferase [Neisseria mucosa C102]
 gi|317400309|gb|EFV80968.1| riboflavin kinase/FMN adenylyltransferase [Neisseria mucosa C102]
          Length = 308

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 164/310 (52%), Gaps = 16/310 (5%)

Query: 6   NIEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           NI + Q  P    +G  V IGNFDG+HLGH  IL++  + A+    P+ V+ F P P+  
Sbjct: 2   NIWLGQRHPPQFPQGAAVTIGNFDGVHLGHKHILQKLKREADRRGLPVVVVIFEPQPKEF 61

Query: 63  IQSSSPI---FTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               +     + +SP   + ++L + G   A+   +F    +  SA+ FI ++L + L  
Sbjct: 62  FARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFNQTFSEMSAQAFIDRLLRKTLNT 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTK 176
           + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ 
Sbjct: 122 RYLLIGDDFRFGAGREGCFELLAQQPDMQTECTPSVIVEDIRT------SSTAVRQALSD 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +       T
Sbjct: 176 GKLEYAKKLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVEADGAFGT 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVA+FG NPT+  N    LE  +FDFS ++YGQR  V F   LR E KF+ IE LK 
Sbjct: 236 R-RGVASFGFNPTVSNNRSQKLEVHLFDFSGDLYGQRIFVRFLHKLRDEKKFESIEALKT 294

Query: 297 YMGEDEKKAR 306
            + +D + A+
Sbjct: 295 QILQDMEDAK 304


>gi|116750603|ref|YP_847290.1| riboflavin biosynthesis protein RibF [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699667|gb|ABK18855.1| riboflavin kinase / FMN adenylyltransferase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 11/311 (3%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F  +E I QSL N      + IGNFDG+H GH  + ++  + A        V++F+P
Sbjct: 1   MEIFRGLENIRQSLNNP----AITIGNFDGVHRGHQALFDRVKEWAKRLGGKSVVMTFDP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++  +  +  ++    + +++   G  A I   F+ E +  SA  F++ +LV  + 
Sbjct: 57  HPVEVLFPNKNLQFITSQERKLELISASGIDAAIVVPFSREFSRISARGFVEDLLVGRIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K ++ G  +RFG  R GD  +L++ G ++GF    +  +R + + +VSS+ IR  + KG
Sbjct: 117 IKALVVGHDYRFGYSREGDIVLLKELGREFGFEVETLSGVRLDDT-VVSSTVIRQLILKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            +  A  LLG  + I+  V  G ++ GR LGFPTAN+++S     + GVY +     + T
Sbjct: 176 EMKRANRLLGRCYEIDGIVEVGRQRGGRLLGFPTANIRMSSQAPPRTGVYIVEVEV-NGT 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G AN G NPT   +  L LE  IFDFS+ IYG+   V F D +R E +F   ++L  
Sbjct: 235 RYRGAANLGYNPTF-GDTDLSLEVHIFDFSRNIYGESIKVWFLDRIRDERRFAGPQELAD 293

Query: 297 YMGEDEKKARK 307
            +  D  +AR+
Sbjct: 294 QIKLDVARARE 304


>gi|333029620|ref|ZP_08457681.1| riboflavin biosynthesis protein RibF [Bacteroides coprosuis DSM
           18011]
 gi|332740217|gb|EGJ70699.1| riboflavin biosynthesis protein RibF [Bacteroides coprosuis DSM
           18011]
          Length = 309

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 165/296 (55%), Gaps = 8/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V +IG FDG+H GH+ +++Q +  AN   +   +L+F  HP  +++  + +  L+    +
Sbjct: 16  VASIGFFDGVHKGHYYLIKQVLAEANRRDLKSALLTFPIHPAKVMRPDTVMEHLTIRDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L K          FT E +  +A +F+Q +L +   VK ++ G   RFG +R     
Sbjct: 76  LELLAKTSVDYCFLIDFTKELSQLTAREFMQFILKDKYNVKVLVIGYDHRFGHNREEGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G++ G   +      ++ S  VSSS IR A+  G VL A   LGY + +E  VI 
Sbjct: 136 DYCRYGKELGIEVIQAKAFYDD-SVDVSSSYIRKAIDAGDVLLAEQYLGYPYFLEGKVIQ 194

Query: 199 GEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           G+++GRT+GFPTAN+ + SPD L+ K+GVYA++   +D Q  Y G+ N G  PT V +GP
Sbjct: 195 GKQLGRTIGFPTANVNVSSPDKLIPKDGVYAVKVLVEDNQEEYWGMLNIGHRPT-VDDGP 253

Query: 256 -LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E  I DF+++IY +   + F   LR E+KF  I+KL   +  DE+  RK+++
Sbjct: 254 NRSIEVNILDFNKDIYNKSIRLLFKHRLRDEVKFSSIDKLVEQLHRDEESVRKLIK 309


>gi|189345847|ref|YP_001942376.1| riboflavin biosynthesis protein RibF [Chlorobium limicola DSM 245]
 gi|189339994|gb|ACD89397.1| riboflavin biosynthesis protein RibF [Chlorobium limicola DSM 245]
          Length = 321

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 156/296 (52%), Gaps = 10/296 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG+FDG+H GH  I+   + IA    +   V++F PHPR ++ + +        ++ E
Sbjct: 29  VTIGSFDGVHRGHRKIISGMLDIARFRKLRSVVVTFEPHPRRVLTAHADESIEILTTLDE 88

Query: 80  KI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           KI  +  +G   L   +FT E A +S+E FI++VLV  L  + V+ G    FG++R+G  
Sbjct: 89  KIEQMAGLGVDLLFVVRFTPELAAWSSELFIEQVLVRMLHARNVVVGYDHGFGRNRSGSG 148

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L + GE YGF    I+E R   S+  SS+ IR  L  G + +A   LG  + +   V 
Sbjct: 149 KTLSQLGELYGFQVDVIEEFRIG-SEHFSSTKIRALLKNGSIRDANAFLGVPYVVSGRVT 207

Query: 198 HGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            G+++GR LGFPTAN+ L PD   +L + GVY +     D  SY  + N G  PT+    
Sbjct: 208 SGKQLGRLLGFPTANLML-PDPQKLLPRSGVY-MATTVIDGESYRAMMNIGCRPTVSDEC 265

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + +E+ I  +S  +YG++   S   ++R E KF  ++ L+  + +D+K      E
Sbjct: 266 DIRVEAHILGYSGHLYGRQIRFSILGFIREEKKFDSLDLLREQLEKDKKTVELFCE 321


>gi|118595222|ref|ZP_01552569.1| riboflavin kinase [Methylophilales bacterium HTCC2181]
 gi|118441000|gb|EAV47627.1| riboflavin kinase [Methylophilales bacterium HTCC2181]
          Length = 300

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 158/289 (54%), Gaps = 23/289 (7%)

Query: 16  HLKG----GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSP 68
           HLKG     ++ IGN+DGIHLGH  IL + I  A  + +  +V++F PHP+       +P
Sbjct: 6   HLKGTHSGSILTIGNYDGIHLGHQEILNKLILEAKKTNLLSSVMTFEPHPKEFFFPKDAP 65

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
              +S   I+EK+   E+     +   KF  E ++ ++ QFI  +L   ++ K VI G  
Sbjct: 66  ARIIS---IREKLEYFEEKRIDQVFIIKFNHEFSSLTSTQFID-ILKNNIQAKQVIIGND 121

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD   L K G     +   +++++NN  +I SS+ +R  L  G +  A ++L
Sbjct: 122 FRFGARREGDFKSLMKDG----INVCVMEKIQNNGERI-SSTMVRDLLANGDLERATYIL 176

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  + I   V+HG+K GR LGFPTAN+ +  +    +GV+A++         SGVAN G 
Sbjct: 177 GRPYAISGKVVHGDKRGRELGFPTANIHMFHNRPPLKGVFAVKL-----NGMSGVANLGT 231

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            PT+     L LE  +FDFS ++YG+   V F   +R E KF++IE LK
Sbjct: 232 RPTITGISKLNLEVHLFDFSDDLYGKHAKVIFLQKVRDEKKFRNIEALK 280


>gi|317969105|ref|ZP_07970495.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. CB0205]
          Length = 314

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 155/303 (51%), Gaps = 7/303 (2%)

Query: 14  PNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIF 70
           P   KG   VA+G+FDG+H GH  ++    + A    +  TV+SF PHPR ++ + + + 
Sbjct: 9   PGQAKGPTAVALGSFDGLHPGHRSVIAAVTERAAQRHLVPTVVSFWPHPREVLFAEARL- 67

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L  PS +  +LE +G   L+   FT + A  S E F+Q+VL E L+   V+ G  FRFG
Sbjct: 68  RLDLPSEKLALLEPLGIEQLVLVPFTRDLAALSPEAFVQQVLHEQLQAGLVVVGANFRFG 127

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R+G    LQ+ G + G   V I  L     +  SSS IR AL  G +  A  LLG  +
Sbjct: 128 AGRSGTTTTLQQLGAERGIE-VQIQPLLAEGEEQFSSSRIRRALAAGDLQEATRLLGRPY 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPT 249
                V+ G  +GR LG+PTAN+Q+     L  EGVYA  +    +   + V N G  PT
Sbjct: 187 RFGGTVVSGRGLGRQLGWPTANLQVDGRKFLPLEGVYAA-WAWLGEERLAAVMNLGPQPT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + P  P  +E  +   + ++ G+   V     LR + +F+++E L   +  D + A  +L
Sbjct: 246 VDPTAPSAVEVHLLGRTLDLNGRELLVEPVQLLRSQQRFENLEALVQQIQRDAESATALL 305

Query: 310 ESS 312
           ES+
Sbjct: 306 ESA 308


>gi|257068219|ref|YP_003154474.1| riboflavin kinase/FMN adenylyltransferase [Brachybacterium faecium
           DSM 4810]
 gi|256559037|gb|ACU84884.1| riboflavin kinase/FMN adenylyltransferase [Brachybacterium faecium
           DSM 4810]
          Length = 338

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 170/332 (51%), Gaps = 23/332 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPR 60
           ++H+++    +P  L    V+IGN+DG+H GH  +L+Q  + A    +    L+F PHPR
Sbjct: 6   IWHSVD---EVPAELGPTAVSIGNYDGVHRGHRFVLDQLRRHAQARSLAPVALTFWPHPR 62

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    L+    ++++L   G   ++  +FT + A YS E F++  LVE L VK 
Sbjct: 63  HVMGDPARTPLLTGHEDRDRLLLLAGMHGVLDLEFTHDFAQYSPEDFVRVFLVEGLGVKC 122

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGH 178
           V+ G    FG+  +GD G +++ G  +GF  V +DEL      +  +SSS IR+AL +G 
Sbjct: 123 VVLGEDALFGRGNSGDIGTMRELGRAFGFDVVTVDELGPEGTGTGRISSSGIRSALLEGE 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT- 236
           V  A   LG   T+   V HG + G  LGFPTAN+  SP  L+  +GVYA      +Q  
Sbjct: 183 VETANEALGRLHTVTDVVHHGFRRGHELGFPTANLGPSPAGLIPADGVYAGYLTVTEQAP 242

Query: 237 SYSGVA---------NFGRNPTMVPNGP--LLLESFIF-DFSQEIYGQRCTVSFFDYLRP 284
           S+ GV          + G NPT   +G     +E+++  D   ++YG    + F  + RP
Sbjct: 243 SHLGVEPLAGAPATISIGTNPTFEADGAPRRTVEAYVHGDHDLDLYGDVVRLEFVAFQRP 302

Query: 285 EIKFKDIEKLKIYMGEDEKKARKIL--ESSYP 314
            +KF  ++ L   M  D +  R+ L  E S P
Sbjct: 303 TLKFDSVDSLIEQMDRDVEVTRRTLAAERSRP 334


>gi|94311816|ref|YP_585026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cupriavidus
           metallidurans CH34]
 gi|93355668|gb|ABF09757.1| bifunctional riboflavin kinase and FAD synthetase [Cupriavidus
           metallidurans CH34]
          Length = 342

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 5/292 (1%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    +   L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 76  FAPEHAPTRIALLRDKLDALRRNGVDRVVVEHFNAHFAAQSPQAFVENVLWHGLHARWVL 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ+ G ++GF    +  +     +I SSS +R AL  G + +A
Sbjct: 136 VGDDFRFGAKRAGDFSYLQEAGRQFGFDVEQMGSVSEGGIRI-SSSAVRQALAGGDLEHA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 195 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVNGIFVVQVHGIADHPVPGVA 254

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + G  PT+   G +LLE  +FDF++ +YG+   V F   LR E ++  +E L
Sbjct: 255 SIGVRPTVEDAGRVLLEVHLFDFNENLYGKLIRVEFMKKLRDEKRYDSLEAL 306


>gi|294670525|ref|ZP_06735405.1| hypothetical protein NEIELOOT_02247 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307804|gb|EFE49047.1| hypothetical protein NEIELOOT_02247 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 308

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 154/297 (51%), Gaps = 21/297 (7%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI---IQSSSPIFTLSPP 75
            V IGNFDG+HLGH  IL+  ++   A     T + F P P      ++ S P   L+P 
Sbjct: 17  AVTIGNFDGVHLGHRHILQRLKSEAAARGLQSTAVVFEPQPAEFFARLRGSEPPPRLTPL 76

Query: 76  SIQEKILEKMGFSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + ++L + G    +R  +F    +   AE FI+ +L   L+ + ++ G  FRFG+DRA
Sbjct: 77  RDKLRLLHESGCVDNVRVLRFNRAFSQMPAEDFIEHILQRELDTRYLLVGDDFRFGRDRA 136

Query: 135 GDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G   +LQ  G   GF T     + +  +R       SS+ +R AL +G +  A  +LG+ 
Sbjct: 137 GSFDLLQNHG---GFVTERTPSILVAGIR------ASSTAVRQALREGRLKEAEQILGHG 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
             +   V HG K+GRT+G PTAN+ L P      GV+ +   +       GVA+FG NPT
Sbjct: 188 CVLSGRVAHGRKLGRTIGSPTANIHLPPHRYALNGVFVVEA-SGTFGKRRGVASFGLNPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +  +G   LE  +FDFS  +YGQR  V F   LR E KF D+E+L+  +  D + A+
Sbjct: 247 VSDSGRQKLEVHLFDFSGNLYGQRLFVRFLHKLRDEEKFGDMEQLRRQIATDIRAAK 303


>gi|32475289|ref|NP_868283.1| riboflavin kinase (FAD synthetase) [Rhodopirellula baltica SH 1]
 gi|32445830|emb|CAD78561.1| probable riboflavin kinase (FAD synthetase) [Rhodopirellula baltica
           SH 1]
          Length = 323

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 166/304 (54%), Gaps = 14/304 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQ----AIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           L+GG V+IGNFDG+HLGH  +LE+    A ++   +   V+  +PHP ++++      +L
Sbjct: 20  LQGGAVSIGNFDGVHLGHRALLERVRWHAQRVGGKAIAIVM--DPHPASVLRPHGAPPSL 77

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +  S + +++   G   L+  + T +  N +AE+F Q+++VE L  K +I G  F FG+D
Sbjct: 78  TSLSRRAELMSGSGIDHLLVCEATRDFLNQTAEEFFQRLIVEQLSAKAIIEGPNFFFGRD 137

Query: 133 RAGDRGILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           RAG+   L++   E+     + +  +R+ +  +VSSS IR A+  G ++ A  +LG R+ 
Sbjct: 138 RAGNTTRLKELAAERQIDVEIVVPSVRDER--MVSSSRIREAIASGDIVLANQMLGSRYR 195

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRN 247
           +   V  GE+ GRTLGFPTAN+     +L + GVYA      D+    T++    + G N
Sbjct: 196 LTGVVTTGEQRGRTLGFPTANLGGVTTLLPEHGVYAA-LACGDECDGPTNHPAAVHIGPN 254

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+ + D+  ++YG+  +++    +R  IKF D   LK  +  D +  R+
Sbjct: 255 PTFNERQETKIEAHLLDYDGDLYGKSLSLTLVSQVRGVIKFADASALKQQLQIDLQTVRE 314

Query: 308 ILES 311
            + S
Sbjct: 315 TVSS 318


>gi|227431851|ref|ZP_03913875.1| FAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227352393|gb|EEJ42595.1| FAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 316

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 7/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  +L +A   A     P+ VL+++PHP    Q+   P+  L+P + 
Sbjct: 23  VVAMGFFDGVHRGHQAVLARAKTEAEKQGVPLAVLTYDPHPIVAFQTLKKPLRYLTPLAK 82

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ I+ ++G   +   +FT + A    +QF+ +V+++ L   TV+ G    +G       
Sbjct: 83  KKSIMSQLGVDRVYVMQFTSKLAKLGGQQFVDEVVMQ-LNPVTVVAGFDHLYGAAGTDSD 141

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +         F  + + E  ++ +Q VSSS IR+ L +G+V  AA  LG   +    V+
Sbjct: 142 MLHLATYATNRFDVITVSEF-DDYNQKVSSSTIRSMLDQGNVDGAAQQLGRVHSTSGIVV 200

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HGE  GR LGFPTAN+Q   +  L   G+YA++ +  D T Y G+A+ GRN T     P+
Sbjct: 201 HGEARGRELGFPTANIQTPEEEWLPGIGIYAVKIKVYD-TWYLGMASIGRNVTFGDARPI 259

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E  I D+ +EIYG+   + +  YLR E+KF++++ L   + ED ++ R
Sbjct: 260 TVEINILDYQEEIYGEFVQIQWCHYLRGEVKFENVQALINQLNEDARQTR 309


>gi|297530558|ref|YP_003671833.1| riboflavin biosynthesis protein RibF [Geobacillus sp. C56-T3]
 gi|297253810|gb|ADI27256.1| riboflavin biosynthesis protein RibF [Geobacillus sp. C56-T3]
          Length = 328

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 168/314 (53%), Gaps = 26/314 (8%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H +E  Q+LP      V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  +
Sbjct: 12  HRLE-RQALPP----TVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVV 66

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   S + +++P   +E+++  +G + L   +FT   A  S E F+ + L + L VK V+
Sbjct: 67  LGKQSELRSITPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQYL-DGLHVKHVV 125

Query: 123 TGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G  F +G+   G    +    RG    F    I +L  +  + VSSS +R  L  G V 
Sbjct: 126 AGFDFTYGRFGKGTMETMPIHARGR---FGQTVIPKLAVDGEK-VSSSRVRKLLEDGAVE 181

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS 239
               LLG  + +E  V+ GE+ GR +GFPTAN+ L+ D +L   GVYA++     Q  Y 
Sbjct: 182 QLPRLLGRFYELEGTVVAGERRGRMIGFPTANIALNSDYVLPAVGVYAVKAVIGGQV-YE 240

Query: 240 GVANFGRNPTM------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           GVAN G  PT       +PN    +E  +F+FS +IYGQ  T+ +   LR E KF  +++
Sbjct: 241 GVANVGYKPTFHKTREGLPN----IEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFASVDE 296

Query: 294 LKIYMGEDEKKARK 307
           L   +  D+K+A +
Sbjct: 297 LTAQIARDKKEAEQ 310


>gi|289423069|ref|ZP_06424884.1| riboflavin biosynthesis protein RibF [Peptostreptococcus anaerobius
           653-L]
 gi|289156400|gb|EFD05050.1| riboflavin biosynthesis protein RibF [Peptostreptococcus anaerobius
           653-L]
          Length = 308

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 159/290 (54%), Gaps = 11/290 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  ++ + +  A  N     V +F+ HP   +    P    +  +I+E
Sbjct: 18  ITIGNFDGVHRGHQTLISKTVDYARMNGLKSVVFTFSNHP---VNYFIPGSVKNIITIEE 74

Query: 80  K--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           K  I+E MG    +  +F  +  + SAE +++K+L+  L ++ +I G  F F K+R G+ 
Sbjct: 75  KLRIIESMGVDICVNIEFNSDMTSISAEDYVKKILLGKLNMRKLIVGHDFSFAKNREGNP 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+   +++GF    +  +  N ++ VSS++IR  + +G+V + A +L   ++I+  VI
Sbjct: 135 AYLESVKDEFGFELEIVAPILLNGTR-VSSTDIRANIIEGNVTSVAFMLDRLYSIDGVVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G +IG  +G+PTAN+     +++  +GVYA      D   Y G  + G NPT V     
Sbjct: 194 KGRQIGSKIGYPTANIDYDRGLVIPADGVYATLVEI-DAKKYKGATSIGNNPT-VNGDKT 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E++I DF Q+IYG+   V F + +RP IKF+ IE+L   +  DE+  R
Sbjct: 252 TVETYILDFDQDIYGKDIRVEFVELMRPMIKFETIEELTDQLKADEEYVR 301


>gi|260583748|ref|ZP_05851496.1| riboflavin biosynthesis protein RibF [Granulicatella elegans ATCC
           700633]
 gi|260158374|gb|EEW93442.1| riboflavin biosynthesis protein RibF [Granulicatella elegans ATCC
           700633]
          Length = 313

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/296 (35%), Positives = 158/296 (53%), Gaps = 10/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+A+G FDGIHLGH  +++QA + A      + ++SF+ HP  I Q + P  +  LSP  
Sbjct: 21  VLALGFFDGIHLGHQEVIQQAKEKAQELGVKLALMSFDHHPSIIFQGADPDELQYLSPFE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE+ G        FT E A+ S ++F+ + +V  L   TV+ G  + +GK    +
Sbjct: 81  RKIELLEEFGVDIFYVIDFTKEFASLSPQEFVDQYMV-GLNAVTVVAGFDYTYGKKEIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L     K  F  V I E +  K +I  S+ IR  L  G +  A  LLGY +T+   V
Sbjct: 140 MELLPTYA-KERFSIVTISEQQTEKQKI-GSTAIRNYLETGQIEEANALLGYEYTMIGKV 197

Query: 197 IHGEKIGRTL-GFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG   G  L GFPTAN+ +S D  LLK+GVY +  + +D+  Y  +A+ G NPT     
Sbjct: 198 VHGFGRGSALLGFPTANIDVSTDTYLLKKGVYIVEIQVEDKW-YPAMASIGVNPTFNDVT 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + +E +I DF ++IY     V +  YLR E+KF  +E L   + EDE   +K  E
Sbjct: 257 KITIEVYILDFQRDIYELPVRVKWLHYLRDELKFDGVEALIAQLKEDEVNTKKYFE 312


>gi|125973502|ref|YP_001037412.1| riboflavin kinase / FMN adenylyltransferase [Clostridium
           thermocellum ATCC 27405]
 gi|256003320|ref|ZP_05428311.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           2360]
 gi|281417705|ref|ZP_06248725.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum
           JW20]
 gi|125713727|gb|ABN52219.1| FMN adenylyltransferase [Clostridium thermocellum ATCC 27405]
 gi|255992610|gb|EEU02701.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           2360]
 gi|281409107|gb|EFB39365.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum
           JW20]
 gi|316940259|gb|ADU74293.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           1313]
          Length = 312

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 167/314 (53%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V +  E N    N  +   V +GNFDG+H+GH  ++++ IK + ++ +   V +F+ H
Sbjct: 1   MRVIYGAESNY---NFTRSTGVGLGNFDGLHVGHMALIDKLIKESESNSLDSVVYTFSKH 57

Query: 59  PRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  II+    +P+ T +   ++  +LEK     L   KF    +    E F++ +LVE L
Sbjct: 58  PENIIRKELFTPLITSTRKKVE--LLEKTRLDYLYFEKFDETFSRMRPEDFVKDILVERL 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +K  + G  +RFG    GD  +L+K G KYGF  + I+ +     ++VSS+ IR  + +
Sbjct: 116 NMKLAVAGFNYRFGYRGMGDTELLRKLGRKYGFRVIVIEPVMLG-DEVVSSTKIRNYILE 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +      LG  +++   V  G ++G T+GFPTAN+     ++L   GVY  R    D 
Sbjct: 175 GDMERVFAFLGRHYSVAGKVEKGRRVGNTIGFPTANIYPEDYLVLPCHGVYITR-TLVDG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + N G NPT      + +E++IFDF ++IYG+   V F   +R E++F  +E+L 
Sbjct: 234 KMYHSITNVGNNPTFGGVDRISVETYIFDFEKDIYGKEIEVFFISKIREEMRFGSVEELI 293

Query: 296 IYMGEDEKKARKIL 309
             + +D + A+K+L
Sbjct: 294 EQIHKDIEIAKKVL 307


>gi|295397099|ref|ZP_06807211.1| riboflavin biosynthesis protein RibF [Aerococcus viridans ATCC
           11563]
 gi|294974691|gb|EFG50406.1| riboflavin biosynthesis protein RibF [Aerococcus viridans ATCC
           11563]
          Length = 315

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 161/297 (54%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+A+G FDG+H GH  +++ A   A+    P+ V++FN  PR + Q   P  +  L+  +
Sbjct: 21  VLALGFFDGVHRGHQAVIQAARDEADRLQLPLAVMTFNMAPRIMYQQIHPEGVTYLTTLA 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK-DRAG 135
            +E+++ ++G   L   + T   A    ++F+ + +V  L  K+V+ G  + +GK D A 
Sbjct: 81  EKERLMTQLGVDYLYVTQLTSSFAALKPQEFVDQYMV-GLHAKSVVAGFDYTYGKKDIAN 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            R +      +  F+ + +++L  + S+ V S+ IR  L  G +  A   LGY ++I+  
Sbjct: 140 MRTLASHAAGR--FNIIEVNKLSEDTSK-VGSTEIRHDLNTGQIDKANQQLGYIYSIDGI 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HGEK GR LG+PTAN+ ++ + L+  EGVY +      Q  Y GVA+ G N T   N 
Sbjct: 197 VVHGEKRGRELGYPTANLMVAAESLIPVEGVYVVEMLLNGQV-YPGVASIGTNITFGENR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E  + DF  EIYG+  TV +  YLRPE+KF  IE L   M +D   A   LES
Sbjct: 256 KRTVEIHLLDFKGEIYGEYVTVYWHKYLRPELKFDGIEGLIKQMDQDAVDAENYLES 312


>gi|148242837|ref|YP_001227994.1| riboflavin biosynthesis protein ribF (riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. RCC307]
 gi|147851147|emb|CAK28641.1| Riboflavin biosynthesis protein ribF (Riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. RCC307]
          Length = 321

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 153/297 (51%), Gaps = 7/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            +A+G+FDG+H GH  ++ +A+ +A   P    TVLSF PHPR ++ +  P   L  P+ 
Sbjct: 23  ALALGSFDGVHAGHRHVIARAVAMAAGPPALVPTVLSFWPHPREVL-AGEPRLRLDLPNE 81

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L  +G   L+   F L+ A  + EQF+Q+VL + L+   V+ G  FRFG  R+G  
Sbjct: 82  KLSVLGPLGIEQLVLVPFDLQLAALTPEQFVQQVLRDQLQAGAVVIGENFRFGNRRSGGP 141

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ+ G   G     +  L    S+  SSS IR AL +  ++ A  LL   +     V+
Sbjct: 142 EDLQRLGGSCGMAVDVLPLLDEGGSRY-SSSRIRQALAEADLVEAERLLQRPYRFSGQVV 200

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAI-RFRTQDQTSYSGVANFGRNPTMVPNGP 255
            G  +GR LG+PTAN+Q+     L KEGVYA   +R   Q +   V N GR PT+ P  P
Sbjct: 201 RGRGLGRGLGWPTANLQVDGRKCLPKEGVYAAWAWRGDSQQAMPAVMNLGRQPTIDPEAP 260

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E  + D   ++ G    V    +LR +  F  +++L   +  D  +AR +L  +
Sbjct: 261 SAVEVHLLDAEVDLAGDSLRVQPLQWLRGQQAFGSLDELTGQISRDADQARALLAGA 317


>gi|254517163|ref|ZP_05129221.1| riboflavin biosynthesis protein RibF [gamma proteobacterium NOR5-3]
 gi|219674668|gb|EED31036.1| riboflavin biosynthesis protein RibF [gamma proteobacterium NOR5-3]
          Length = 317

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 149/301 (49%), Gaps = 4/301 (1%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P H +  V  IG FDG+HLGH  ++ Q  +  +  + P TV++F P PR  + +++    
Sbjct: 12  PQH-RPSVATIGAFDGVHLGHQTVVAQLAEQGHKYDLPTTVVTFEPLPREYLAAATAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L     + + L  +G   L+  +F       SA QF  ++ V+ L V++++ G  FRFG 
Sbjct: 71  LQSFRERLEALAALGVDRLLCLRFDENLRRMSAAQFADEIFVKGLGVRSLVLGDDFRFGH 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR G   ++Q  GE+ GF T+    L     +I SS+ +R AL  G  + A+  LG  + 
Sbjct: 131 DREGGFSLMQAIGEREGFETLATRTLEFEGDRI-SSTRLRNALAIGDFVTASACLGRDYE 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   VI G ++GR +G PTAN+ L    +   GV+A+            +AN G  PT+ 
Sbjct: 190 ISGRVIFGRQLGRQIGTPTANIALRRGSVPLSGVFAVTVSGAGLCDAMAIANVGVRPTVS 249

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 LE  I D    +YG+R  V F   LR E +F+ ++ LK  + ED   AR    S
Sbjct: 250 AGSRPNLEVHILDGEHALYGERLQVRFLHKLREEQRFESVDLLKAQIQEDIDGARSWFAS 309

Query: 312 S 312
           S
Sbjct: 310 S 310


>gi|15605718|ref|NP_213095.1| riboflavin kinase [Aquifex aeolicus VF5]
 gi|2982868|gb|AAC06488.1| riboflavin kinase [Aquifex aeolicus VF5]
          Length = 314

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 151/277 (54%), Gaps = 12/277 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +GNFDG+HLGH  ++E   K A   N    VL+F PHP  ++        L+  + + 
Sbjct: 30  ITVGNFDGVHLGHRYLIENLKKKAKSENLKTLVLTFCPHPLKVLAPQLLPCELTDINEKI 89

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  ++G   L   +F  E A   A +F++K++ E L+ + ++ G  +R+G  R G+  +
Sbjct: 90  EIFRELGVDYLCFIRFDKEFAKIRAREFLEKIIYEKLKCRYLLVGYDWRYGYRREGEIEL 149

Query: 140 LQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            ++ G + GF    ++E +    K  IVSS+ IR  L +G V      LG+ + ++  V+
Sbjct: 150 AKEVGSELGFE---VEEAKPFKIKGHIVSSTLIRRLLREGRVEEVREYLGHNYWVKRKVV 206

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G++ G  +GFPTAN+Q + ++ LKEGVYA++     +  Y GVAN+G  PT       +
Sbjct: 207 KGDQRGSKIGFPTANLQNTENLCLKEGVYAVKV----EDKYLGVANYGYRPTF-GKKKRV 261

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           LE  I DF   + G+R  V F  ++R E KF  +E+L
Sbjct: 262 LEVHILDFEGNLRGKRIKVEFLKFIREEKKFSSVEEL 298


>gi|238755523|ref|ZP_04616862.1| FMN adenylyltransferase [Yersinia ruckeri ATCC 29473]
 gi|238706279|gb|EEP98657.1| FMN adenylyltransferase [Yersinia ruckeri ATCC 29473]
          Length = 295

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHLALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K L ++G   L+  KF    A   A+ F+ ++LVE L V+ +  G  FRFG  R GD  
Sbjct: 61  AKYLAQVGVDYLLCVKFDPRFAANMAQTFVVQLLVEKLGVQFLAVGDDFRFGAGRQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    +  A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALHDDDLALAETLLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+          SGVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLSAEPLSGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVNMDLYGRHIDVVLRAKLRDEQRFASLDALKQQIANDVVTARNFFGLKTPV 295


>gi|291295383|ref|YP_003506781.1| riboflavin biosynthesis protein RibF [Meiothermus ruber DSM 1279]
 gi|290470342|gb|ADD27761.1| riboflavin biosynthesis protein RibF [Meiothermus ruber DSM 1279]
          Length = 295

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 159/291 (54%), Gaps = 15/291 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVAIG+FDG+HLGH  ++ QA + A   ++P+ V +F+P  +  ++    +  LS    +
Sbjct: 16  VVAIGSFDGLHLGHQHLIHQAQQAAKRLHAPLLVYTFDPPSKVFMRGEGFLTDLSE---K 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L  +G    +   FT   A  S + F++ +    LE + +  G  FRFG+ RAG   
Sbjct: 73  LELLRGLGVEIALIVPFTEAFARRSKDDFLEDL--RTLEARQIYVGADFRFGQGRAGG-- 128

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+          + + EL  +    V SS IR  L +G V  A  LLG  +T    V  
Sbjct: 129 -LEDLNTVAPTQILPLLELGGSP---VKSSRIRDLLRRGDVDEARLLLGRAYTARGIVRE 184

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GR LGFPTAN++++P  +L  GV+A+R +T  Q  + G+AN G  PT V    L  
Sbjct: 185 GDRLGRQLGFPTANLEVAPLKILPLGVFAVRVQTP-QGRFGGMANVGYRPT-VAGQTLRF 242

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  +F F+ ++YGQ  TV F   LR E+KF+ +E LK  + +D + AR++L
Sbjct: 243 EVHLFGFAGDLYGQELTVEFLTRLRGEMKFESLEALKAQLAQDAEAARRLL 293


>gi|145593927|ref|YP_001158224.1| riboflavin biosynthesis protein RibF [Salinispora tropica CNB-440]
 gi|145303264|gb|ABP53846.1| riboflavin kinase / FMN adenylyltransferase [Salinispora tropica
           CNB-440]
          Length = 309

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 8/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
            + P      VV IG FDG+H GH  I+  A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   DAAPGGWGRSVVTIGVFDGVHRGHQAIIGHAVARARELGVKSVVVTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+ P+ + +++E +G   L    FT + +  SAE F+  VLVE L    V+ G  FR
Sbjct: 68  PAVLTEPTRKAELIEALGVDVLCVLPFTPDFSRLSAEAFVHDVLVEHLHAALVVVGENFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD  +L++ G  +G+  V    L      I SS+ IR+ +  G V+ AA  LG 
Sbjct: 128 FGHRAAGDVALLEQLGRTFGY-AVEGAPLVAEAGTIFSSTYIRSCVAAGDVVAAASALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRF--RTQDQTSYSGVANFG 245
              +E  V+ G++ GR LGFPTAN+       +  +GVYA R   R Q +   S V + G
Sbjct: 187 PHRLEGVVVRGDRRGRELGFPTANLLCHRYAAVPADGVYAARLVRRGQREPLMSAV-SIG 245

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NP+        +E+++ DF  ++YG+R  + F  +LR ++++  IE L   + ED ++ 
Sbjct: 246 TNPSF-SGRERRVEAYVLDFDADLYGERLALDFVAHLRGQVRYDSIEPLVAQIAEDVERT 304

Query: 306 RKIL 309
           R+ L
Sbjct: 305 RQAL 308


>gi|182417567|ref|ZP_02948892.1| riboflavin biosynthesis protein RibF [Clostridium butyricum 5521]
 gi|237667189|ref|ZP_04527173.1| riboflavin biosynthesis protein RibF [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378580|gb|EDT76108.1| riboflavin biosynthesis protein RibF [Clostridium butyricum 5521]
 gi|237655537|gb|EEP53093.1| riboflavin biosynthesis protein RibF [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 311

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 11/289 (3%)

Query: 22  VAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +A+G+FDG+HLGH    H + E+A K  N     V +F  HPR ++        L   + 
Sbjct: 18  IALGSFDGLHLGHLSLIHKVHEEAKK--NGGRSIVYTFKNHPRALLNKDDAPKLLMDNNE 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + LEK G   L   +F  E    + ++FI+  L+    +K +I G  ++FG    GD 
Sbjct: 76  KAEFLEKCGVDILYFQEFNKEFMEMTPKEFIE-FLINRFNIKGLIVGFNYKFGYKNMGDT 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L++  ++Y F  +FI E      +++SS+ IR ++  G +  A  +LG+ F +  +V+
Sbjct: 135 ELLKELQKEYNF-KLFIMEPCKYDGKVISSTRIRNSVEDGKIYEAYKMLGHPFRLSGEVM 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG KIGRT+GFPTAN++   + +L   GVY    +  +   Y G+ + G NPT V    L
Sbjct: 194 HGRKIGRTIGFPTANLKYDKNFILPAVGVYYTNVKVNNSI-YKGITSVGNNPT-VEGKTL 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            +E++I DF+++IYG+   V F   +R E KF  +E+LK  + +D+  A
Sbjct: 252 TIETYILDFNKDIYGENIEVFFIKKIRNEKKFNGVEQLKNQLEKDKSFA 300


>gi|212692669|ref|ZP_03300797.1| hypothetical protein BACDOR_02166 [Bacteroides dorei DSM 17855]
 gi|237725050|ref|ZP_04555531.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|212664747|gb|EEB25319.1| hypothetical protein BACDOR_02166 [Bacteroides dorei DSM 17855]
 gi|229436788|gb|EEO46865.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 306

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 164/304 (53%), Gaps = 11/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  HPR +IQ++ 
Sbjct: 9   HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMHPRQVIQTTY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P  + ++LE       +   FT E +  SA +F+Q +L     + T++ G   
Sbjct: 65  HPQLLSSPKEKLELLETTQVDYCLLLPFTQELSLLSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+       + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSESFEDYCRYGEELNIYMVRARAYTDGEDKI-SSSVIRQLLKEGKVSQAAQFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  ++G+ N G
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWAGMLNIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E  I +FS++IY +   + F  YLRPE K+  I++L   M +D +K 
Sbjct: 242 HRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKYLRPEEKYGTIDELIAQMHKDREKT 301

Query: 306 RKIL 309
            KIL
Sbjct: 302 AKIL 305


>gi|261419467|ref|YP_003253149.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           sp. Y412MC61]
 gi|319766282|ref|YP_004131783.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC52]
 gi|261375924|gb|ACX78667.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC61]
 gi|317111148|gb|ADU93640.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC52]
          Length = 328

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 168/314 (53%), Gaps = 26/314 (8%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H +E  Q+LP      V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  +
Sbjct: 12  HRLE-RQALPP----TVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVV 66

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   S + +++P   +E+++  +G + L   +FT   A  S E F+ + L + L VK V+
Sbjct: 67  LGKQSELRSITPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQYL-DGLHVKHVV 125

Query: 123 TGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G  F +G+   G    +    RG    F    I +L  +  + VSSS +R  L  G V 
Sbjct: 126 AGFDFTYGRFGKGTMETMPIHARGR---FGQTVIPKLAIDGEK-VSSSRVRKLLEDGAVE 181

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS 239
               LLG  + +E  V+ GE+ GR +GFPTAN+ L+ D +L   GVYA++     Q  Y 
Sbjct: 182 QLPRLLGRFYELEGTVVAGERRGRMIGFPTANIALNSDYVLPAVGVYAVKAVIGGQV-YE 240

Query: 240 GVANFGRNPTM------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           GVAN G  PT       +PN    +E  +F+FS +IYGQ  T+ +   LR E KF  +++
Sbjct: 241 GVANVGYKPTFHKTREGLPN----IEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFASVDE 296

Query: 294 LKIYMGEDEKKARK 307
           L   +  D+K+A +
Sbjct: 297 LTAQIARDKKEAEQ 310


>gi|254445099|ref|ZP_05058575.1| riboflavin biosynthesis protein RibF [Verrucomicrobiae bacterium
           DG1235]
 gi|198259407|gb|EDY83715.1| riboflavin biosynthesis protein RibF [Verrucomicrobiae bacterium
           DG1235]
          Length = 315

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 153/310 (49%), Gaps = 9/310 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRT 61
             ++      P HL     AIG FDG+H GH L++E A   A  S      L+F PHP  
Sbjct: 10  LESVNFGADCPVHL-----AIGMFDGLHRGHRLVVESAKAAAKASGGVCGALTFWPHPSR 64

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           + +   P   +  P ++   L K+G   ++   FT E A   AE F+  +     E+ +V
Sbjct: 65  LFRPDDPARMILSPELKRLELGKLGLDFIVEEPFTREFAGIEAELFLSHLKSVLPELASV 124

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  +RFG+ RAGD   L ++GE+ G     ID L +  S+ VSS+ IR+ LT G +  
Sbjct: 125 HAGENWRFGRGRAGDMTELARQGEETGILVNAIDCLESKDSR-VSSTRIRSLLTTGEIEE 183

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-SYSG 240
           A  LLGY +     V  G+++GRT+  PT N+    D+    GVYA+       T  Y  
Sbjct: 184 ANALLGYDYYSIGTVTQGKRMGRTIDAPTLNLPFEGDLKPAYGVYAVSVSDVSLTKQYRA 243

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VANFG  PT+      LLE+F+ D     YG R  V +  +LR E KF  I+ LK  + +
Sbjct: 244 VANFGIRPTVEVTQKPLLEAFLLDSCPFDYGHRLKVIWHSFLRQEQKFNGIDALKSQIAK 303

Query: 301 DEKKARKILE 310
           D  +A+   +
Sbjct: 304 DVIQAKAYFD 313


>gi|189499381|ref|YP_001958851.1| riboflavin biosynthesis protein RibF [Chlorobium phaeobacteroides
           BS1]
 gi|189494822|gb|ACE03370.1| riboflavin biosynthesis protein RibF [Chlorobium phaeobacteroides
           BS1]
          Length = 321

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 153/288 (53%), Gaps = 8/288 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS--SSPIFTLSPPSI 77
           V +G++DG+H GH  I+ Q +  A+   +   V++F PHPR I+    S  I  L+    
Sbjct: 29  VTVGSYDGVHAGHRRIISQMVASASARGLRTVVITFEPHPRKIVNRDPSGQIRLLTLLEE 88

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  ++E++G   L    F    A  S+E FIQ+VL++ +  KT++ G    FG DR G  
Sbjct: 89  KAVLIEELGVDWLFVVHFDRFFAAQSSESFIQQVLLDSIGAKTIVIGYDHGFGHDRKGGV 148

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++  E+  F  + +DE+R  +++  SS+ IR  L +G +  A   LG  + I  DV+
Sbjct: 149 STLRRMAEQKRFDVLVVDEVRL-QAEHFSSTRIRALLGEGRIREANLFLGAPYLISGDVV 207

Query: 198 HGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HGEK GR +GFPT N+++  S  +L K GVY I     D   +  + N G  PT+     
Sbjct: 208 HGEKKGREIGFPTVNLRIGSSDKLLPKYGVY-IATVIIDGRVFKAMMNIGLRPTVSEGSS 266

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L E+ I     E+YG+R T    D +R E+KF   E L+  + +D+K
Sbjct: 267 PLCEAHILGHKGELYGKRLTFHLLDRVRDEMKFPSFEALQEQLKKDQK 314


>gi|327479528|gb|AEA82838.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           stutzeri DSM 4166]
          Length = 316

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 157/325 (48%), Gaps = 24/325 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A ++    P  V+ F P P
Sbjct: 7   LHNLR-----PRH-RGCVATIGNFDGVHRGHQAILARLRERAAEL--GLPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R           L+    + ++L + G   ++   F       SA +F+   LVE L V+
Sbjct: 59  REYFSPDRAPARLTRLREKLQLLSEQGVDLVLCLAFNRRLRELSAAEFVHATLVEGLGVR 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DRAGD   L K G   GF      T+ +D  R      VSS+ +R  L
Sbjct: 119 HLEVGDDFRFGCDRAGDFDFLLKAGAAEGFSVEAATTIEVDGER------VSSTRLRQVL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G +  A  LLG  F I   V+HG+K+GR LG PTAN+QL        GV+ +    + 
Sbjct: 173 ADGDLGCAEALLGRPFAITGRVMHGQKLGRQLGAPTANVQLKRRNTPLSGVFVVTLEVEG 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              ++GVAN G  PT+  +G   LE  + D+  ++YG+   V+F   LR E +F  +E L
Sbjct: 233 NV-FAGVANIGMRPTVESDGQPHLEVHLLDYQGDLYGRLVQVTFHRKLRDEQRFASLEAL 291

Query: 295 KIYMGEDEKKARKILESSYPLSERD 319
           K  +  D   AR    +S  ++ +D
Sbjct: 292 KTAIDADIAAARDYWRASSLMTSQD 316


>gi|300858691|ref|YP_003783674.1| riboflavin kinase/FMN adenylyltransferase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686145|gb|ADK29067.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206401|gb|ADL10743.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis C231]
 gi|302330957|gb|ADL21151.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276644|gb|ADO26543.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis I19]
          Length = 332

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 162/328 (49%), Gaps = 19/328 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           + ++H+IE    +P  L   V+ IG FDG+H GH  ++  A + A     P  +++FNPH
Sbjct: 7   VDIWHHIE---DIPADLDASVITIGVFDGVHRGHRTLISAATQRARVLGVPSILVTFNPH 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L   + +  +++ +G   ++   FT   +  S E F   ++ + L+ 
Sbjct: 64  PLAVLRPEKMPPLLGTVAQRANLVKNLGVDHMLAMNFTANLSQLSPEDFFVSIIKDKLKA 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FG   AG+   L+K GE YG     ++ L  +++ IVSSS IR AL +G 
Sbjct: 124 KVVVVGENFTFGYKAAGNTETLKKLGEDYGIEIRVLELLAEDQT-IVSSSVIRKALAEGD 182

Query: 179 VLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
           V  A   LG  F++  DV+ G  + G+ LG+PTAN+     I L E GVYA   +     
Sbjct: 183 VRRAKWGLGREFSVSGDVVRGAGRGGKELGYPTANLYFPDSIALPEDGVYAGWLQITSAA 242

Query: 237 S----------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ESF+ D   ++YG   TV F D +R  +
Sbjct: 243 PIDGDMVAGVRYPAAISVGHNPTF-GDQRRSVESFVLDRQADLYGHSVTVEFVDRIRGMV 301

Query: 287 KFKDIEKLKIYMGEDEKKARKILESSYP 314
           KF  +E+L   + +D +  R+IL    P
Sbjct: 302 KFSGMEELLEAIAKDVEATREILRVDEP 329


>gi|261338977|ref|ZP_05966835.1| hypothetical protein ENTCAN_05181 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318807|gb|EFC57745.1| riboflavin biosynthesis protein RibF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 308

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 4/291 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLELFAGEKSPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ F+  +LV+ L V+ +  G  FRFG  R GD
Sbjct: 76  EKLRYLAESGVDYVLCVRFDRRFAALTAQNFVSDLLVKQLGVQFLAVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G +YGF             + VSS+ +R AL    +  AA+LLG+ FTI   V
Sbjct: 136 FLLLQRAGLEYGFDVTSAMTFCEGGVR-VSSTAVRQALANDELETAANLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRT+GFPTAN+ L   +   +GVYA+         + GVAN G  PT V     
Sbjct: 195 VHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVTGLGDKPFYGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARE 304


>gi|253995904|ref|YP_003047968.1| riboflavin biosynthesis protein RibF [Methylotenera mobilis JLW8]
 gi|253982583|gb|ACT47441.1| riboflavin biosynthesis protein RibF [Methylotenera mobilis JLW8]
          Length = 304

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 162/322 (50%), Gaps = 22/322 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +F +I  +   P  L     AIGNFDG+HLGH  +L Q  + A   N    V++F PH
Sbjct: 1   MQIFRHIPTSLQQPCAL-----AIGNFDGMHLGHQALLAQLKQTAQAVNLEAAVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      S    L   S++EK+    + G   +   +F    A  +AE F+ ++L   +
Sbjct: 56  PREFFTPESAPARLC--SMREKLEYFAQAGVERVYVCRFNQRFAKVTAEAFMHELLRNAV 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + V+ G  FRFG  RAG            GF  V + ++ +  S+ VSS+ +R+AL +
Sbjct: 114 NAQAVLVGEDFRFGAKRAGSVNDFVA----AGFKLVSLPQV-DLGSERVSSTRVRSALDE 168

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  AA LLG  ++I   V+HG K GR LGFPTAN+ +  +    +GVYA++       
Sbjct: 169 GRLQEAALLLGRGYSISGKVVHGAKRGRQLGFPTANVHMRHERPALKGVYAVKL-----D 223

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             + VAN G  PT+     L LE  + DF+  +Y +   V F   +R E+KF  ++ LK 
Sbjct: 224 GLNAVANLGVRPTIAGVPKLSLEVHVLDFNGNLYDKHVHVEFLQKIRNEMKFDGLDALKA 283

Query: 297 YMGEDEKKARKILESSYPLSER 318
            +  D + ARK   +  P +ER
Sbjct: 284 QIAIDVELARKFFGALTP-AER 304


>gi|333011406|gb|EGK30820.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-272]
 gi|333021645|gb|EGK40894.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-227]
          Length = 295

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLLVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|238795020|ref|ZP_04638615.1| FMN adenylyltransferase [Yersinia intermedia ATCC 29909]
 gi|238725671|gb|EEQ17230.1| FMN adenylyltransferase [Yersinia intermedia ATCC 29909]
          Length = 295

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 151/297 (50%), Gaps = 4/297 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   L+  KF    A  +A+ F+ ++LV+ L VK +  G  FRFG +R GD  
Sbjct: 61  ARYLAEAGVDYLLCVKFDPRFAANTAQAFVAQLLVDKLGVKFLTVGDDFRFGAERQGDFQ 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G ++GF  +  D   +   +I SS+ IR AL    ++ A  LLG+ ++I   V+H
Sbjct: 121 LLQQAGAEFGFDVISTDSFCDGGLRI-SSTAIRQALFDDDLVLAEALLGHPYSISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPLPGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E  + D + ++YG    V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 239 EVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLDALKQQIAHDVVTARTFFGLKTPV 295


>gi|218258460|ref|ZP_03474827.1| hypothetical protein PRABACTJOHN_00482 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225432|gb|EEC98082.1| hypothetical protein PRABACTJOHN_00482 [Parabacteroides johnsonii
           DSM 18315]
          Length = 308

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 17  LKGG--VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTL 72
           LKG   V  IG FDG+HLGH  ++ +  ++A  +  P  V++F  HPR ++ +      L
Sbjct: 10  LKGKRLVATIGFFDGVHLGHRFLIHELKQVAEAAGLPSAVITFPEHPRAVLHADYQPKLL 69

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + K L   G    I   FTLE +  +A++FI  VL + L V T++ G   RFG +
Sbjct: 70  NSFEEKLKHLASTGIDYCIVLDFTLELSRLTAKEFITTVLADRLHVDTLLIGYDHRFGHN 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R          G+ YG   +   +    ++  VSSS IR  L +  V  AAHLL Y + +
Sbjct: 130 REDGFEQYVTYGKNYGIRVIKASQYSEGEAA-VSSSEIRKLLAECRVEEAAHLLTYPYGL 188

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              ++ G K+GR LGFPTAN+Q+     I+   GVYA+R    +Q  Y G+   G  PT+
Sbjct: 189 RGSIVSGYKVGRKLGFPTANIQVDEPFKIIPGIGVYAVRVYLNEQ-RYKGMLYIGNRPTL 247

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                + LE  I +FS +IY    TV+F  ++R +IKF  +++L   + +D +   +IL
Sbjct: 248 DNGDNITLEVNILNFSGDIYNNEITVAFIQHVRGDIKFNSLDQLIDQLKKDRETVDRIL 306


>gi|294634954|ref|ZP_06713472.1| riboflavin biosynthesis protein RibF [Edwardsiella tarda ATCC
           23685]
 gi|291091663|gb|EFE24224.1| riboflavin biosynthesis protein RibF [Edwardsiella tarda ATCC
           23685]
          Length = 320

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 153/307 (49%), Gaps = 14/307 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L +  +       P+ V+ F P P  +    +    L+  
Sbjct: 15  RGCVLTIGNFDGVHQGHRALLARLRQEGERLGLPVMVMIFEPQPLEMFAPQNAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G  A++  +F  + A +SA  F++ +LV+ L VK ++ G  FRFG  R G
Sbjct: 75  RDKCRYLADAGVDAVLCVRFDRQFAAHSAHYFVKHLLVDRLGVKFLMIGDDFRFGAGREG 134

Query: 136 DRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           D  +LQ  G  YGF         + +LR      VSS+ +R AL    +  A  LLG+ +
Sbjct: 135 DYRLLQAAGRTYGFTVANSLSFCVGDLR------VSSTAVRQALRHDDLTLAETLLGHPY 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT 
Sbjct: 189 RIAGRVVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPLPGVANIGTRPT- 247

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           V      LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   ARK   
Sbjct: 248 VAGIRQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQIAQDVVAARKFFG 307

Query: 311 SSYPLSE 317
            + P+  
Sbjct: 308 LTTPVQS 314


>gi|169630191|ref|YP_001703840.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium abscessus ATCC 19977]
 gi|169242158|emb|CAM63186.1| Probable bifunctional FAD synthetase/riboflavin biosynthesis
           protein RibF [Mycobacterium abscessus]
          Length = 320

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 19/315 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
              +P+     V+ IG FDG+H GH  ++ +A+K A   N    +++F+PHP  ++   +
Sbjct: 7   QDEIPSDWGRCVLTIGVFDGVHRGHAELIGRAVKAARELNLKSVLMTFDPHPMEVVFPGT 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + ++ E++G    +   FT E    S E+++ ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELAEELGVDVFLVVPFTPEFMKLSPERYVHELLVERLHVAEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK  AG+  +L+K GE++GF    +  L    +   SS+ IR+ +  G ++ A   LG
Sbjct: 127 TFGKKAAGNVQMLKKAGERFGFKVDAV-TLVTEHAVTFSSTYIRSCVDAGDMVAATEALG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ--------- 235
               +E  V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 186 RPHRVEGVVVRGDGRGRELGFPTAN--VAPPMFSAIPADGVYAAWFTLLGHGPTMGTVVP 243

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+FI D + ++YGQ   V F   +R   KFK I+ L
Sbjct: 244 GERYQAAVSVGSNPTF-SGKARTVEAFILDTTADLYGQHVAVDFVARIRSMEKFKSIDDL 302

Query: 295 KIYMGEDEKKARKIL 309
            + MG+D +KAR IL
Sbjct: 303 VVAMGKDAEKARTIL 317


>gi|224023573|ref|ZP_03641939.1| hypothetical protein BACCOPRO_00276 [Bacteroides coprophilus DSM
           18228]
 gi|224016795|gb|EEF74807.1| hypothetical protein BACCOPRO_00276 [Bacteroides coprophilus DSM
           18228]
          Length = 307

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 163/297 (54%), Gaps = 7/297 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSP 74
           L   +  IG FDG+H GH  +++Q  + A    +  T+++F  HPR ++Q+      LS 
Sbjct: 12  LPPSIATIGCFDGVHRGHRYLIQQVCEAAVKRGLHTTLITFPIHPRQVMQADYQPQLLSC 71

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L+++     +   FT E +  SA++F+  +L E   ++ ++ G   RFG +R+
Sbjct: 72  LPQKTALLKQLQADYCLMLPFTHELSRLSAKEFM-NMLHEQFNIQALLIGYDHRFGHNRS 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  + G++ G   +    L  N   I SSS IR  L +G+V +A H LGY + ++ 
Sbjct: 131 EGFQDYCRYGKELGMEIIQAQALIENGVSI-SSSTIRKLLKEGNVKDANHFLGYSYYLDG 189

Query: 195 DVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V++G K+GRTLGFPTAN++ S PD L+ +EGVYA+    ++Q  ++G+ N G  PT+  
Sbjct: 190 KVVNGYKVGRTLGFPTANLRPSCPDKLIPEEGVYAVHVYLKEQ-RFAGMLNIGHRPTLNN 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              L +E  I DF+ +IY Q   + F   +R E KF  + +L   + +D K+ RK+L
Sbjct: 249 GSDLSIEVHILDFNADIYDQSMRIEFVQRIRTEQKFTGLNELIEQLQQDRKEVRKLL 305


>gi|296135804|ref|YP_003643046.1| riboflavin biosynthesis protein RibF [Thiomonas intermedia K12]
 gi|295795926|gb|ADG30716.1| riboflavin biosynthesis protein RibF [Thiomonas intermedia K12]
          Length = 323

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 162/333 (48%), Gaps = 22/333 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           MHVF  I  ++SL +      + IGNFDG+H GH  +L Q +++A +  +  TVL+F PH
Sbjct: 1   MHVFRGIH-HRSLASRT---ALTIGNFDGVHRGHLAMLHQLVQVARSRALVPTVLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR    +       +P    ++++K+  L + G   ++  +F    A  S E+F+ +++ 
Sbjct: 57  PRDFFATLQGHPDSAPSHISTLRDKLCALREAGVQQVVVLRFDPRIAALSPEEFVAQIVW 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKR-----GEKYGFHTVFIDELRNNKSQIVSSS 168
           + L+ + V+ G  FRFG  RAGD   L        GE      V    LR      +SSS
Sbjct: 117 QGLKAQFVLVGDDFRFGARRAGDFAQLDTLMRNLGGEARQMPVVTETALR------ISSS 170

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            +R AL  G +  A  LLG  + I   V+HG K+GR LGFPT N++         GV+  
Sbjct: 171 AVRQALQAGDMETAQVLLGRPYAISGHVLHGAKLGRKLGFPTLNLRFDRARPALGGVFVA 230

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           R    +      VA+ G  P +  +G +LLE+ +FD+  E YG+   V     LR E  +
Sbjct: 231 RVHGLELAPLPAVASLGTRPAVETDGRVLLETHVFDWQAEAYGKLIRVELLHKLRDEAHY 290

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
            D+ +L   +  D  +AR         + RDRI
Sbjct: 291 PDLTQLIAAIQNDSDQARAWFAQLARQTTRDRI 323


>gi|212704223|ref|ZP_03312351.1| hypothetical protein DESPIG_02278 [Desulfovibrio piger ATCC 29098]
 gi|212672427|gb|EEB32910.1| hypothetical protein DESPIG_02278 [Desulfovibrio piger ATCC 29098]
          Length = 303

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V IGNFDG+H GH +++ +A+  +    +   V++F PHPR +     P   L+  + +
Sbjct: 13  AVTIGNFDGVHQGHQVLIRRALTYSQQFGLDCVVITFWPHPRVLF--GKPHQPLTSRAAR 70

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L+ +G   ++   FT E A  S E+F+++ L+  L +K ++ G  F  G+ R+G   
Sbjct: 71  MRLLQGLGDLRVLELPFTHELAALSPEEFVRQHLLP-LRLKHLVIGHDFTLGRGRSGQPD 129

Query: 139 ILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           +L+  GEKYGF    +D+L   +    +VSS+ +R  + KG V  AA LLG+ +  E  V
Sbjct: 130 VLRSLGEKYGFD---VDQLPPVEVGGHVVSSTCLRELIGKGDVATAASLLGHAYGCEGLV 186

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           +HGE  G  LGFPTAN+ +   +L   GVYA R        +   V N GR PT    G 
Sbjct: 187 VHGEGRGTGLGFPTANIAIPDTMLPAPGVYATRVVVPHLGRTLQAVTNIGRKPTFGDYG- 245

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           L +ESF+ D    +YG    + F   LR E +F+  + L   +  D  +AR +L
Sbjct: 246 LSIESFLLDTDLNLYGNELRLDFVARLRDEKRFESADALVAQIRTDVARARDLL 299


>gi|157147567|ref|YP_001454886.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           koseri ATCC BAA-895]
 gi|157084772|gb|ABV14450.1| hypothetical protein CKO_03367 [Citrobacter koseri ATCC BAA-895]
          Length = 312

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 149/298 (50%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLREEGRKRGLPVMVMIFEPQPLELFATEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ FI  +LV+ L V+ +  G  FRFG  R GD
Sbjct: 76  EKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKRLGVRFLAVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI   V
Sbjct: 136 FLLLQKAGAEYGFDITNTQTFCEGGVRI-SSTAVRQALAEDNLPLAESLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPMPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR     S P
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARDFFGLSKP 311


>gi|33519592|ref|NP_878424.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia
           floridanus]
 gi|33517255|emb|CAD83638.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia
           floridanus]
          Length = 311

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 7/289 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSP 68
            ++ +H +G ++AIGNFDG H GH  ++ Q    KI    P+ V+ F P P+   +  S 
Sbjct: 8   HNIKSHHRGCLLAIGNFDGFHRGHQALISQLNKKKINYKRPVMVMIFEPQPK---EYFSK 64

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           I T+     ++K+  L   G   ++   F  + A+  A  F++++L+  L V+ V  G  
Sbjct: 65  IITIRLTRFRDKVQYLFTAGVDIVLCVGFNKKLASIKAYNFVKEILIYKLGVRCVCVGND 124

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD   L+  G+  GF  +  D   ++  + +SS+ ++TAL +  +++A  L+
Sbjct: 125 FRFGAFRHGDYNFLKTLGKHKGFKVICADTCLDSYGKKISSTLVKTALIENRIVDAEFLM 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + I   VIHG ++GR +GFPTAN+ L    L   GVYA++          G+AN G 
Sbjct: 185 GHSYCISGKVIHGNELGRIIGFPTANISLKGKNLPVHGVYAVKVYGILHFPLPGIANIGT 244

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            PT+       LE  I + S  +Y    TV   D +R E  F  I KL+
Sbjct: 245 RPTINGVTQHQLEVHILNISTNLYSYYITVVILDKIRNEQCFNSIHKLQ 293


>gi|291550236|emb|CBL26498.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus torques
           L2-14]
          Length = 303

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 157/303 (51%), Gaps = 21/303 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +G FDG+H GH  +L + IK A        V +F+     ++ +           ++
Sbjct: 17  AVTLGKFDGLHRGHQKLLNRIIKYAQKEDCDSVVCAFDMDRDCLMTNEE-----RRAFLE 71

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +K+        LI   FT E     AE+FI+++L + L    ++ GT F FG ++ G+  
Sbjct: 72  DKV------DYLIEIPFTREMMEMEAEKFIEEILYKKLHASHIVVGTDFNFGHEKRGNHQ 125

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K   KYG+ TV + E    K + +SS+ IR  L  G+V  A  LLGY + I S V H
Sbjct: 126 MLEKYAAKYGY-TVDVVEKAYYKDREISSTYIRELLLDGNVPLANELLGYPYEITSVVEH 184

Query: 199 GEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G+++GRTLGFPT  M L+P    IL K GVYA R    D   Y GV N G  PT+     
Sbjct: 185 GQQLGRTLGFPT--MNLAPQEKKILPKYGVYACRVLV-DGVWYGGVGNAGVKPTVAQEKR 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            L E +++ +  + YG+  TV   ++ RPE KF  +E+LK  + +D +   + L  ++P 
Sbjct: 242 RLFEVYVYGYEGDAYGKTATVQILEFERPETKFHSVEELKDRVMKDMRYGEEYL-KNHPF 300

Query: 316 SER 318
            ER
Sbjct: 301 DER 303


>gi|78189420|ref|YP_379758.1| riboflavin kinase / FAD synthetase [Chlorobium chlorochromatii
           CaD3]
 gi|78171619|gb|ABB28715.1| FMN adenylyltransferase [Chlorobium chlorochromatii CaD3]
          Length = 320

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSS--SPIFTLSPPS 76
           VV +G++DG+H GH +IL + +++A  NN    V++F PHPRT+++ +   P+  L+   
Sbjct: 28  VVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSVVVTFEPHPRTVLKGALTGPLGLLTTLE 87

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +L       L   +FT + A  +++ FI+ VLV  L  + +I G    FG+DR+G 
Sbjct: 88  EKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIRNVLVGLLGAERIIVGYDHAFGRDRSGS 147

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++ G +  F    IDE+      + SS+ IR  L  G +      LG  + I   V
Sbjct: 148 HNTLERLGNELHFGVEVIDEVLIGNEHL-SSTRIRKLLQDGRIEEVNEFLGSPYLITGWV 206

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + G ++GRT+GFPT N+Q  P  LL + GVY  R   Q    Y  + N G+ PT+  NG 
Sbjct: 207 VQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFARTMVQG-VPYMALMNIGKRPTVSSNGE 265

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +E+ +  F   +YG+    S   ++R E +F  +E L+  + +D+K     LE
Sbjct: 266 ATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFASLEALQEQLEKDKKAVEMYLE 320


>gi|163839424|ref|YP_001623829.1| FMN adenylyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162952900|gb|ABY22415.1| riboflavin kinase [Renibacterium salmoninarum ATCC 33209]
          Length = 321

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 159/326 (48%), Gaps = 19/326 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  F+ I     +P      VV +GNFDG+H GH  +L   +  A    +    ++F+PH
Sbjct: 1   MQYFNGI---SDVPTGFGPSVVTLGNFDGVHRGHQEVLRNLVSDARKRGAKAVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  S    +   + +   +   G  A++   +TL+ A  SAE+F+Q   V+ L+ 
Sbjct: 58  PAKVHRPDSAPGQIMSLADRVATMAATGLDAVLVLHYTLDFAQQSAEEFVQSTFVDALKA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +V+ G   RFG+  +GD   +Q+ G K+GF    I E    +    SS+ +R AL  G 
Sbjct: 118 TSVVVGHDVRFGRGNSGDLATMQQLGTKFGFDVEVIGEFGTERR--CSSTWVREALDHGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQ 235
           V  AA +LG    +   V+HG   GR LGFPTAN  L+PD    +  +G+YA     +  
Sbjct: 176 VRTAAEVLGRAHHMRGTVVHGAARGRELGFPTAN--LAPDSSGYIPADGIYAGWLLDEAA 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFK 289
           T +    + G NPT        +E+ + D  +E      +YGQ  TV F ++LR  + + 
Sbjct: 234 TRWPAAISVGSNPTF-EGVSRQVEAHVIDRPEEAVEDFNLYGQSVTVEFVEHLRGMVAYT 292

Query: 290 DIEKLKIYMGEDEKKARKILESSYPL 315
             E L   M +D  +AR++L++   L
Sbjct: 293 GPEALIEQMCKDVVQAREVLQADEAL 318


>gi|327540401|gb|EGF26987.1| riboflavin biosynthesis protein RibF [Rhodopirellula baltica WH47]
          Length = 323

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 167/311 (53%), Gaps = 14/311 (4%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ----AIKIANNSPITVLSFNPHPRTIIQS 65
           +  L   L+GG V+IGNFDG+HLGH  +LE+    A ++   +   V+  +PHP ++++ 
Sbjct: 13  DSDLHQSLQGGAVSIGNFDGVHLGHRALLERVRWHAQRVGGKAIAIVM--DPHPASVLRP 70

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                +L+  S + +++   G   L+  + T +  N +AE+F Q+++VE L  K +I G 
Sbjct: 71  HGAPPSLTSLSRRAELMSGSGIDHLLVCEATRDFLNQTAEEFFQRLIVEQLSAKAIIEGP 130

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            F FG+DRAG+   L++   +      + +  +R+ +  +VSSS IR A+  G ++ A  
Sbjct: 131 NFFFGRDRAGNTTRLKELAAERQIDVEIVVPSVRDER--MVSSSRIREAIASGDIVLANQ 188

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSG 240
           +LG R+ +   V  GE+ GRTLGFPTAN+     +L + GVYA      D+    +++  
Sbjct: 189 MLGSRYRLTGVVTTGEQRGRTLGFPTANLGGVTTLLPEHGVYAA-LACGDECDGPSNHPA 247

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             + G NPT        +E+ + D+  ++YG+  +++    +R  IKF D   LK  +  
Sbjct: 248 AVHIGPNPTFNERQETKIEAHLLDYDGDLYGKSLSLTLVSQVRGVIKFADASALKQQLQI 307

Query: 301 DEKKARKILES 311
           D +  R+ + S
Sbjct: 308 DLQTVRETVSS 318


>gi|329960348|ref|ZP_08298773.1| riboflavin biosynthesis protein RibF [Bacteroides fluxus YIT 12057]
 gi|328532786|gb|EGF59568.1| riboflavin biosynthesis protein RibF [Bacteroides fluxus YIT 12057]
          Length = 313

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 157/297 (52%), Gaps = 6/297 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSP 74
           L+  V  IG FDG+H GH  ++ Q  ++A    +  +V++F  HPR ++Q       L+ 
Sbjct: 17  LRPSVATIGFFDGVHRGHRYLIGQVAEVAAARGMASSVITFPVHPRKVMQPGYHPDLLTT 76

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L   G    +   FT E A  SA+QF+  +L E   ++ ++ G   RFG +R+
Sbjct: 77  CDEKVSLLAGTGMDYCMMLDFTPELARLSAQQFM-AILKERYRIEVLVVGYDHRFGHNRS 135

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  + G + G   +       N+ + VSSS IR  L +G V  AA  LGY F ++ 
Sbjct: 136 EGFDDYVRYGGELGIEVMSARAYSYNEDRTVSSSMIRHCLREGQVSEAAEYLGYDFFLDG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+ G ++GR +GFPTAN++++ PD ++  +GVYA+ +   D   Y G+ + G  PT+  
Sbjct: 196 TVVGGYRVGRKIGFPTANLRVNDPDKMIPADGVYAV-YVYLDGIRYGGMLSIGYRPTLAN 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                +E  IF F  +IYG+   +SF  Y+RPE+KF  +E+L   +  DE++ +  L
Sbjct: 255 GTDRSIEVNIFHFKADIYGRPMRISFVRYMRPELKFNTVEELVARIRRDEEEVKAAL 311


>gi|311747029|ref|ZP_07720814.1| riboflavin biosynthesis protein RibF [Algoriphagus sp. PR1]
 gi|126578730|gb|EAZ82894.1| riboflavin biosynthesis protein RibF [Algoriphagus sp. PR1]
          Length = 307

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 172/315 (54%), Gaps = 14/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++  +     +PN     VV  G FDG+H+GH  IL++  +IA        +++F PH
Sbjct: 1   MKIYEGLSDIPQIPN----PVVTSGTFDGVHMGHQKILKRIREIARKIQGETVLITFWPH 56

Query: 59  PRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++      +  LS    + K+L   G   L+   FT + +  S+++FIQ+VLV+ ++
Sbjct: 57  PRLVLYPEEHNLRLLSTFEEKTKLLRSFGIDHLVTIPFTKDFSQLSSKEFIQRVLVDKIK 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTK 176
            K ++ G   RFGK+R G    LQ+   ++GF    I   R +  +I VSS+ IR AL  
Sbjct: 117 TKKLVIGYDHRFGKNREGSFEYLQQHYHEFGFDLEEIS--RQDVEEIGVSSTKIRHALEN 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQD 234
           G +  A+  LG  + +   VI G++IGR++GFPTAN+ +  D  L  ++GVYA+     +
Sbjct: 175 GMIETASKYLGRPYELNGLVIKGQQIGRSIGFPTANIHIPNDYKLIPRDGVYAVE-AVVN 233

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y  + N G  PT V      +E+ +FDF  ++Y ++ TV    +LR E KF+++++L
Sbjct: 234 GALYKAMLNIGNRPT-VGGTKKTVEAHLFDFQGDLYDKQITVFLKGFLREEQKFENLDEL 292

Query: 295 KIYMGEDEKKARKIL 309
           K  +  D+K A+ +L
Sbjct: 293 KHQLAIDQKMAKSLL 307


>gi|146281349|ref|YP_001171502.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           stutzeri A1501]
 gi|145569554|gb|ABP78660.1| riboflavin kinase/FAD synthase [Pseudomonas stutzeri A1501]
          Length = 316

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 155/320 (48%), Gaps = 14/320 (4%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A ++    P  V+ F P P
Sbjct: 7   LHNLR-----PRH-RGCVATIGNFDGVHRGHQAILARLRERAAELG--VPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R           L+    + ++L++ G   ++   F       SA +F+   LVE L V+
Sbjct: 59  REYFSPDRAPARLTRLREKLQLLDEQGVDLVLCLAFNRRLRELSAAEFVHATLVEGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  FRFG DRAGD   L K G   GF TV          + VSS+ +R  L  G +
Sbjct: 119 HLEVGDDFRFGCDRAGDFDFLLKAGAAEGF-TVEAATTIEVDGERVSSTRLRQVLADGDL 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  F I   V+HG+K+GR LG PTAN+QL        GV+ +    +    ++
Sbjct: 178 GCAEALLGRPFAITGRVMHGQKLGRQLGAPTANVQLKRRNTPLSGVFVVTLEVEGNV-FA 236

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GV N G  PT+  +G   LE  + D+  ++YG+   V+F   LR E +F  +E LK  + 
Sbjct: 237 GVVNIGMRPTVESDGQPHLEVHLLDYQGDLYGRLVQVTFHRKLRDEQRFASLEALKTAID 296

Query: 300 EDEKKARKILESSYPLSERD 319
            D   AR    +S  ++ +D
Sbjct: 297 ADIAAARDYWRASSLMTSQD 316


>gi|91217232|ref|ZP_01254193.1| riboflavin biosynthesis protein RibF [Psychroflexus torquis ATCC
           700755]
 gi|91184575|gb|EAS70957.1| riboflavin biosynthesis protein RibF [Psychroflexus torquis ATCC
           700755]
          Length = 312

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 174/311 (55%), Gaps = 13/311 (4%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
           M +++N+ E + S+       VV IG FDG+H+GH  I+++ I  A N  +   +L+F P
Sbjct: 1   MKIYNNVSEFDSSIQT-----VVTIGTFDGVHMGHRKIIKRLIDSAENGHLQTALLTFYP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR ++Q S  +  ++    ++ ILE+ G   LI + FT++ +  SA ++++++LV+ L 
Sbjct: 56  HPRMVLQQSEDLKLINTIEERKLILEETGLEHLIVHPFTMDFSRLSAREYVEEILVKSLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G    FG++R  +   L++ G+++ F  + I + ++ +   VSS+ IR +L  G
Sbjct: 116 AKKIVIGYDHHFGRNRTANIEDLKEFGKEFDFEVLEISK-QDIEDVAVSSTKIRRSLEDG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ 235
            + +A   L   F +  +++ G+ +G+ +G+PTANM +  S  ++ K+GVY +     + 
Sbjct: 175 DLESANTYLSLPFFLSGEIVRGKGLGKNMGYPTANMDIKESYKLIPKQGVY-VAASVING 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G+ N G NPT V      +E+F FD  +++YGQ   +     +R E+KF  ++ L 
Sbjct: 234 DKHFGMMNIGTNPT-VGGKDRSIETFFFDLDKDLYGQHLHIQLLKRIRSEVKFDGLDALI 292

Query: 296 IYMGEDEKKAR 306
             M  DE  A+
Sbjct: 293 EAMNADEVFAK 303


>gi|297191716|ref|ZP_06909114.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721429|gb|EDY65337.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 319

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 158/310 (50%), Gaps = 10/310 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVQRARELGVPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   +  ++ ++G  A++   FT E +  S   FI KVLV+ L  + VI G  FR
Sbjct: 68  PPLLAPHHRRADLMAELGVDAVLVLPFTAEFSKLSPADFIVKVLVDKLHARAVIEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L + G  Y +    +D     ++   +  SS+  R  + +G V  AA +
Sbjct: 128 FGHRAAGNVDFLAEMGRTYDYEVEVVDLYVRGEAGGGEPFSSTLTRRLIAEGDVEGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA  + T          + 
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYA-GWLTAAGERMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    E+YG   TV F  Y+R + KF  IE L + M +D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLELYGLHVTVDFLAYVRGQEKFDTIESLLVAMADDVK 305

Query: 304 KARKILESSY 313
           K R+ L +SY
Sbjct: 306 KCRE-LTASY 314


>gi|320008223|gb|ADW03073.1| riboflavin biosynthesis protein RibF [Streptomyces flavogriseus
           ATCC 33331]
          Length = 317

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           MH +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MHCWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+P   + +++  +G  A++   FT   +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGTHPPLLAPHQRRAELMAGLGVDAVLILPFTAAFSQLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALT 175
           K VI G  FRFG   AGD   L + G  Y + T  ID   + ++   +  SS+  R  + 
Sbjct: 118 KLVIEGPNFRFGHRAAGDVTFLTELGATYDYGTEVIDLYVSGEAGGGEPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA  + T +
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHSAIPADGVYA-GWLTVN 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R  +KF+ I+ 
Sbjct: 237 GEAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMLKFESIDD 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D K++ +++E+
Sbjct: 296 LLVAMAADVKRSSELIEA 313


>gi|229019003|ref|ZP_04175845.1| FMN adenylyltransferase [Bacillus cereus AH1273]
 gi|229025248|ref|ZP_04181670.1| FMN adenylyltransferase [Bacillus cereus AH1272]
 gi|228736076|gb|EEL86649.1| FMN adenylyltransferase [Bacillus cereus AH1272]
 gi|228742331|gb|EEL92489.1| FMN adenylyltransferase [Bacillus cereus AH1273]
          Length = 323

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 166/299 (55%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  + +  ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHVEYITPMRD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   +++ L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYIID-LNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+++R  +  G +     +LG  +T+E  
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEYQEEK-VSSTSLRKLIRNGEMEQIPSILGRAYTVEGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  + GV N G  PT   N 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-HDGVCNIGYKPTFKENE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S+
Sbjct: 255 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVAQIAKDKKIAQEYFSSA 313


>gi|229012992|ref|ZP_04170157.1| FMN adenylyltransferase [Bacillus mycoides DSM 2048]
 gi|229134616|ref|ZP_04263426.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST196]
 gi|229168548|ref|ZP_04296271.1| FMN adenylyltransferase [Bacillus cereus AH621]
 gi|228614954|gb|EEK72056.1| FMN adenylyltransferase [Bacillus cereus AH621]
 gi|228648877|gb|EEL04902.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST196]
 gi|228748246|gb|EEL98106.1| FMN adenylyltransferase [Bacillus mycoides DSM 2048]
          Length = 335

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 166/298 (55%), Gaps = 13/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  +
Sbjct: 33  VMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPHPSVVLGKKEAHVEYITPMRL 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+I+  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+++R  +  G +     +LG  +T+E  
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEYQEEK-VSSTSLRKLIRNGEMEQIPSILGRAYTVEGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  + GV N G  PT   N 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-HDGVCNIGYKPTFKENE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S
Sbjct: 267 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVAQIAQDKKVAQEYFAS 324


>gi|326333604|ref|ZP_08199843.1| riboflavin biosynthesis protein RibF [Nocardioidaceae bacterium
           Broad-1]
 gi|325948620|gb|EGD40721.1| riboflavin biosynthesis protein RibF [Nocardioidaceae bacterium
           Broad-1]
          Length = 306

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 157/305 (51%), Gaps = 7/305 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIF 70
           +P  L    V IGNFDG+HLGH  ++ +  ++A+   +T+++  F+PHP  +++      
Sbjct: 4   VPAGLGRTCVVIGNFDGVHLGHQHVISRGREVADAKDLTLVAVTFDPHPMAVLRPEHAPG 63

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++L   G  A++   F ++ AN+S + F Q+VLV+ L  +  + G  FR+G
Sbjct: 64  VLTTMEERSELLHAAGADAVLALPFDMDMANWSPDDFAQRVLVDALHAEACVVGANFRYG 123

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              AGD   L   G+ + F    I    +   Q+ SS+ IRT L  G V  AA  LG  +
Sbjct: 124 CKAAGDVADLIAYGKIHDFSAEGIP--LDGGPQVWSSTYIRTCLATGDVTGAAEALGRPY 181

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNP 248
           ++   V+ G++ GR LGFPTAN+   S   +  +G+YA     +D    +    + G NP
Sbjct: 182 SVRGVVVKGDQRGRELGFPTANVPTDSLTAVPPDGIYAGWLTRRDTGERFPAAISVGTNP 241

Query: 249 TMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T        +ES++ D    E+YG    V+F + LR  + F+ I  L   M  D ++AR+
Sbjct: 242 TFEGVVGRRVESYVLDRDDLELYGVEVEVAFVERLRGMVAFEGIGALVEQMHADVERARQ 301

Query: 308 ILESS 312
           IL  S
Sbjct: 302 ILTES 306


>gi|147677608|ref|YP_001211823.1| FAD synthase [Pelotomaculum thermopropionicum SI]
 gi|146273705|dbj|BAF59454.1| FAD synthase [Pelotomaculum thermopropionicum SI]
          Length = 312

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQ-SSSPIFTLSPPSI 77
           V+ +GNFDG+HLGH  ++ + + +         V +F+PHP  ++   + P   L+  S 
Sbjct: 19  VIGLGNFDGVHLGHQKLISELVSMGKELEGTTAVFTFHPHPLAVLDPENCPPLLLTQES- 77

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++K++ +MG   L +  F L+ AN S E FI+ VL E L V  V+ G  + FG    G  
Sbjct: 78  KQKLIARMGVEVLFQVPFDLKLANISPEDFIRIVLYEELGVIGVVVGYNYTFGHKGKGTP 137

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+K   +YG+    +  +   + Q+VSS+ IR  L KG V  A+  LGY   +E  V+
Sbjct: 138 DLLEKFSGRYGYRLKVVPPV-TVEGQVVSSTLIRGLLLKGEVAEASRYLGYYPFVEGTVV 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G++ G  LGFPTAN+ +  ++L+   GVY+      D  SY G+AN G  PT       
Sbjct: 197 AGDRRGSKLGFPTANLDIDQNLLVPSNGVYSAMVNV-DGDSYYGLANIGTKPTF-QGKKR 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +E  + DF +++YG+   VSF   LR E KFK    L   +  D ++AR
Sbjct: 255 NIEVHLLDFYRDLYGKHIKVSFTRRLREEKKFKTPADLVKQIERDIRQAR 304


>gi|220931632|ref|YP_002508540.1| FMN adenylyltransferase;riboflavin kinase [Halothermothrix orenii H
           168]
 gi|219992942|gb|ACL69545.1| FMN adenylyltransferase;riboflavin kinase [Halothermothrix orenii H
           168]
          Length = 307

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 6/277 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDGIHLGH  ++    K+      P  V +F+ HP  +I       +L     +
Sbjct: 18  VVALGSFDGIHLGHQKVITTVCKMGKQLGIPCGVYTFDKHPLKVINPDIAPQSLMSRDQK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE+MG        FT + +     +F++++L + L+ K V+ G  FRFG   AG+  
Sbjct: 78  ISLLEEMGVDYYFEQVFTTDFSKLPFNKFVREILAKKLKAKHVVVGEDFRFGNRGAGNIN 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+  G++ GF  V +  ++    + +SS+ IR+ + +G +      LG  + ++  VIH
Sbjct: 138 SLKVLGKELGF-GVTVCSIKRAHGRKISSTTIRSLIREGKIKEIPDYLGRYYQLDGTVIH 196

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+  G+TLG PTAN++L  D  L   GVYA+  R  D+  Y G+ANFG  PT        
Sbjct: 197 GDGRGKTLGIPTANLRLKADFALPPNGVYAVYVR-YDKQLYKGIANFGDRPTF-SGADYS 254

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +E  + DF  ++YGQ   V   D++RPEI F+  ++L
Sbjct: 255 IEVHLLDFDGKLYGQVILVDLVDFIRPEITFESPQEL 291


>gi|160900815|ref|YP_001566397.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Delftia
           acidovorans SPH-1]
 gi|160366399|gb|ABX38012.1| riboflavin biosynthesis protein RibF [Delftia acidovorans SPH-1]
          Length = 349

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 42/345 (12%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           P       V IGNFDG+H GH   L L  A       P  VL+F PHPR     +     
Sbjct: 10  PGRESACAVTIGNFDGVHRGHQAMLALLSAEAAQRGVPTCVLTFEPHPRDYFAQTLGRPE 69

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           ++P  I   ++K+  LE+ G    +   F    A+ S + FI +VLV  L  K V+ G  
Sbjct: 70  IAPARIGTLRDKLSELERCGVDQTVVLPFNQTLASQSPQAFIDEVLVAGLGAKYVLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNA 182
           FRFG  RAGD  +L   G++ GF     D  R N  ++    VSS+++R AL +G + +A
Sbjct: 130 FRFGTQRAGDYAMLDAAGQRQGF-----DVARMNSYEVHGLRVSSTHVRAALAEGRMQDA 184

Query: 183 AHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQ 233
           A LLG+ +TI   V+HG K+GR+L         GF T N++ +       G++A+     
Sbjct: 185 ARLLGHPYTISGHVVHGRKLGRSLAESRQGAGDGFRTLNLRFNHWKPAASGIFAVLVHGL 244

Query: 234 DQTSYSGVANFGRNPTMVP----NGPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRP 284
           ++    GVAN G  P++ P     G +LLE+   D+      +E YG+   V     L  
Sbjct: 245 NERPLRGVANLGVRPSLDPTDVNGGRVLLETHCLDWPGAPGGEEAYGKIIRVELLHKLHD 304

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSY-PL-------SERDRI 321
           E+K+  ++ L   + +D   AR    + + P+       + RDRI
Sbjct: 305 ELKYDSLDALTAGIAKDCDDARAFFATIHTPIYTETRRQTTRDRI 349


>gi|158522245|ref|YP_001530115.1| riboflavin biosynthesis protein RibF [Desulfococcus oleovorans
           Hxd3]
 gi|158511071|gb|ABW68038.1| riboflavin biosynthesis protein RibF [Desulfococcus oleovorans
           Hxd3]
          Length = 317

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 166/316 (52%), Gaps = 23/316 (7%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTI 62
           +E   SL    +  VV IGNFDG+H GH  +     E+A +I   +    ++F PHP  +
Sbjct: 11  VEGLDSLEGPFERAVVTIGNFDGVHKGHQALFARVKEKAREIGGTA--VAVTFEPHPAKV 68

Query: 63  IQSSSPIFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +  ++P    +PP I     + +++   G  AL+   F++  A   A  F++ +L+  + 
Sbjct: 69  LHPNTP----APPRITLYEQKAELIAANGIDALVCIPFSMVFAALGAMAFLKDILIHRIG 124

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV---FIDELRNNKSQIVSSSNIRTAL 174
           +K ++ G  + FGK R G+   L+K  ++ GF  +   ++D +  +    +SS+ +R  +
Sbjct: 125 MKAIVVGRDYTFGKHREGNVDFLEKHAQELGFEVICEPWVDTVPGHGR--ISSTTVRKTV 182

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
             G V  A  LLG  + +   V+ G  + G  LGFPTAN+ L+ ++    GVYA+     
Sbjct: 183 MAGDVAVAFDLLGRYYQVRGTVVSGRGRGGSALGFPTANIALTDELCPANGVYAVTVEYG 242

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +    GVAN G +PT   +    +E  IFDF+++I GQR  V+F + LR E KF  I++
Sbjct: 243 GR-RLKGVANIGYSPTF-EDHLFTVEVHIFDFAEQITGQRIRVNFIERLRDEKKFSGIDE 300

Query: 294 LKIYMGEDEKKARKIL 309
           LK  +  D  +AR+IL
Sbjct: 301 LKRQIAVDAAEARRIL 316


>gi|56419802|ref|YP_147120.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           kaustophilus HTA426]
 gi|56379644|dbj|BAD75552.1| riboflavin kinase (flavokinase); FAD synthetase (FAD
           pyrophosphorylase) [Geobacillus kaustophilus HTA426]
          Length = 328

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 167/314 (53%), Gaps = 26/314 (8%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H +E  Q+LP      V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  +
Sbjct: 12  HRLE-RQALPP----TVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVV 66

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   S + +++P   +E+++  +G + L   +FT   A  S E F+ + L + L VK V+
Sbjct: 67  LGKQSELRSITPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQYL-DGLHVKHVV 125

Query: 123 TGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G  F +G+   G    +    RG    F    I +L  +  + VSSS +R  L  G V 
Sbjct: 126 AGFDFTYGRFGKGTMETMPIHARGR---FGQTVIPKLAVDGEK-VSSSRVRKLLEDGAVE 181

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS 239
               LLG  + +E  V+ GE+ GR +GFPTAN+ L+ D  L   GVYA++     Q  Y 
Sbjct: 182 QLPRLLGRFYELEGTVVAGERRGRMIGFPTANIALNSDYALPAVGVYAVKAVIGGQV-YE 240

Query: 240 GVANFGRNPTM------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           GVAN G  PT       +PN    +E  +F+FS +IYGQ  T+ +   LR E KF  +++
Sbjct: 241 GVANVGYKPTFHKTREGLPN----IEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFTSVDE 296

Query: 294 LKIYMGEDEKKARK 307
           L   +  D+K+A +
Sbjct: 297 LTAQIARDKKEAEQ 310


>gi|71082865|ref|YP_265584.1| riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71061978|gb|AAZ20981.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 305

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 164/303 (54%), Gaps = 13/303 (4%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQS 65
           ++ N+ K  ++ IGNFDG+HLGH    ++  K+AN      N  I VL+F P P+     
Sbjct: 8   NISNNHKKSIILIGNFDGVHLGH----QKLFKLANTYKKKFNLKIGVLTFEPMPKMFFNK 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +   F +S  + ++ IL+ +G   +I  KF  + +   ++ FI+++L + LE + +    
Sbjct: 64  NFKNFRISNINQKKIILDHLGVDFIITKKFDKKFSAIKSDFFIKEILSKKLEAQYIFVSN 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG  R GD   L K   +Y +  V    L  NK +++SS+ IR+ L KG +     L
Sbjct: 124 NFRFGNKREGDVRQLIKNEGRYHYKIVKPQPLILNK-KVISSTYIRSLLEKGQLKKTNKL 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-SYSGVANF 244
           L   ++IE  V  G + G+ +GFPT N+ +   ++   GVYA++ + ++   S   +AN 
Sbjct: 183 LSRNWSIEGIVQKGRQQGKKIGFPTCNIDIKDYVIAMPGVYAVKVKQKNSNKSLKAIANL 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT      +LLE  IF+FS  +Y +  +V F  ++R E KFK++++LK  +  D K 
Sbjct: 243 GYRPTF-NQKKILLEVHIFNFSGNLYNKYLSVEFTKFIRKEKKFKNVDQLKKQIQSDLKV 301

Query: 305 ARK 307
           A+K
Sbjct: 302 AKK 304


>gi|197303051|ref|ZP_03168099.1| hypothetical protein RUMLAC_01778 [Ruminococcus lactaris ATCC
           29176]
 gi|197297906|gb|EDY32458.1| hypothetical protein RUMLAC_01778 [Ruminococcus lactaris ATCC
           29176]
          Length = 302

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 149/282 (52%), Gaps = 13/282 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V +G FDG+H GH  ++E+    A N  ++V+      R  + +            ++K
Sbjct: 17  AVTLGKFDGLHRGHQKLIEKICSYAGNDCVSVVCAFDMQRNCLMTKEE---------RKK 67

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L+      LI Y FT +     AE+FIQK+L E L    ++ G+ F FG  + GD  +L
Sbjct: 68  LLDGK-VDYLIDYPFTGDLMTMEAERFIQKILYEKLHAAHIVVGSDFSFGYRKRGDHQML 126

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++  +KY +    +++ R    +I SS+ +R AL+ G++  A  LLGY + +   V HG 
Sbjct: 127 ERYAQKYDYTVDVVEKARLGDREI-SSTYVREALSHGNIRLAQELLGYPYEMTGIVEHGR 185

Query: 201 KIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           ++GRTLGFPT N+      IL + GVYA R    D   Y GV N G  PT+      L E
Sbjct: 186 ELGRTLGFPTMNVAPQDGKILPRYGVYACRVLI-DGKWYGGVGNAGVKPTVTQEQRELFE 244

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            +++D+  + YG+  T+ F ++ RPE +F  +++L+  + +D
Sbjct: 245 VYVYDYEGDAYGKYITIRFLEFERPETRFDSVKELRACVMQD 286


>gi|320186136|gb|EFW60878.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri CDC 796-83]
          Length = 295

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVY +      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYVVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|298369469|ref|ZP_06980786.1| riboflavin biosynthesis protein RibF [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282026|gb|EFI23514.1| riboflavin biosynthesis protein RibF [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 308

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 159/302 (52%), Gaps = 15/302 (4%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI-- 69
           P+  +G  V IGNFDG+HLGH  IL++    A+    P+ V+ F P P+      +    
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHILQKLKHEADLRGLPVAVVIFEPQPKEFFARKAGKKL 70

Query: 70  -FTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            + +SP   + ++L + G   A+   +F    A+ +A+ FI ++L   L  + ++ G  F
Sbjct: 71  PYRISPLRTKLRLLRETGCVDAVWVLRFDQSFADMTAQTFIDRLLRRTLNTRYLLIGDDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G +  A  L
Sbjct: 131 RFGAGREGCFELLSQQPDIQTERTPSVIVEDIRT------SSTAVRQALSDGLLEYAKKL 184

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +       T   GVA+FG
Sbjct: 185 LGHDYVLSGKVKHGQKLGRTINAPTANIQLPPYHYALSGVFVVEADGAFGTR-RGVASFG 243

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT+  N    LE  +FDF  ++YGQR  V F   LR E KF  IE+LK  + +D   A
Sbjct: 244 FNPTVSNNRSQKLEVHLFDFDGDLYGQRIFVRFLHKLRDEQKFDSIEELKTQILQDMDDA 303

Query: 306 RK 307
           R+
Sbjct: 304 RR 305


>gi|297183896|gb|ADI20018.1| fad synthase [uncultured gamma proteobacterium EB000_65A11]
          Length = 319

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 11/309 (3%)

Query: 7   IEINQSLPN---HLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRT 61
           +EI + + N     KG VV +GNFDG+H GH  +L   +A       P  ++ F P P  
Sbjct: 1   MEITRGMVNLSPQPKGCVVTLGNFDGVHKGHQAVLANVRAKSKELGLPSVLVCFEPQPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                +    L+    + ++L   G   ++  +F   T + +A +FIQ +LVE L  K +
Sbjct: 61  YFDEFNAPARLTRFREKIELLSAQGVDRVLCLRFNEATRSMTAAEFIQ-LLVEKLNTKAL 119

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G   +FG DR+G+  +L + GE++GF    +  L   +++ VSSS IR  L  G +  
Sbjct: 120 FVGDDAKFGADRSGNFSLLVEAGEEFGFEVTNLRTLTFGETR-VSSSRIRQCLALGDLKQ 178

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSY 238
           A  LLGY ++I+  V++G ++GRTL  PTAN+QL       +GV+A+     +   +  Y
Sbjct: 179 AKELLGYPYSIKGKVVYGRQLGRTLDAPTANVQLHRYRAPIDGVFAVDVSIDEGAGEKVY 238

Query: 239 SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVAN G  PT+       +LE F+FDF  ++YG    V F   LR E KF  +E+LK  
Sbjct: 239 QGVANVGVRPTLEEESLKPILEVFLFDFDGDLYGSCVKVVFCSKLRNEKKFDGLEELKQA 298

Query: 298 MGEDEKKAR 306
           +  D  +A+
Sbjct: 299 IAADVTQAK 307


>gi|163941546|ref|YP_001646430.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           weihenstephanensis KBAB4]
 gi|163863743|gb|ABY44802.1| riboflavin biosynthesis protein RibF [Bacillus weihenstephanensis
           KBAB4]
          Length = 323

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 166/298 (55%), Gaps = 13/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  +
Sbjct: 21  VMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPHPSVVLGKKEAHVEYITPMRL 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+I+  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+++R  +  G +     +LG  +T+E  
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEYQEEK-VSSTSLRKLIRNGEMEQIPSILGRAYTVEGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  + GV N G  PT   N 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-HDGVCNIGYKPTFKENE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S
Sbjct: 255 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVAQIAQDKKVAQEYFAS 312


>gi|302670334|ref|YP_003830294.1| riboflavin biosynthesis protein RibF [Butyrivibrio proteoclasticus
           B316]
 gi|302394807|gb|ADL33712.1| riboflavin biosynthesis protein RibF [Butyrivibrio proteoclasticus
           B316]
          Length = 308

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 146/286 (51%), Gaps = 11/286 (3%)

Query: 21  VVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            +AIG FDGIHLGH    +LIL+Q     +    TV +F P P        P+  L    
Sbjct: 23  AIAIGKFDGIHLGHKKLLNLILDQK---QDGLKATVFTFEPSPEEFF-VGHPVKQLFTRK 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K  + MG   L+ +    ETA    E F++ +LVE L+   +  G    FG    GD
Sbjct: 79  EKRKAFQDMGIDILVEFPLNAETAATPPEDFVKTILVEDLKADYIAAGCDVSFGDKGRGD 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           + +L+   ++ GF    ID++  +  + VSS+ +R  +  G++  A  LLG  ++I   V
Sbjct: 139 QHLLRNMSKELGFELCLIDKVMLDGDE-VSSTRVRNQIADGNIPMAKRLLGNDYSISGIV 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG  +G T+G PT N+      LL   GVY+      D+  Y G+ N GR PT+  +  
Sbjct: 198 EHGRHLGHTIGIPTVNIMPPAGKLLPPFGVYSSTV-VIDEVEYHGMTNIGRKPTVSNDNQ 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + +E++I+DF  ++YG+   V   ++ RPE+KF  +++LK  M  D
Sbjct: 257 VGVETYIYDFDADVYGKSIEVKLLEFKRPEMKFASVDELKAQMTRD 302


>gi|261380480|ref|ZP_05985053.1| riboflavin biosynthesis protein RibF [Neisseria subflava NJ9703]
 gi|284796728|gb|EFC52075.1| riboflavin biosynthesis protein RibF [Neisseria subflava NJ9703]
          Length = 308

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 164/310 (52%), Gaps = 16/310 (5%)

Query: 6   NIEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           NI + Q  P    +G  V IGNFDG+HLGH  IL++  + A+    P+ V+ F P P+  
Sbjct: 2   NIWLGQRHPPQFPQGAAVTIGNFDGVHLGHKHILQKLKREADRRGLPVVVVIFEPQPKEF 61

Query: 63  IQSSSPI---FTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               +     + +SP   + ++L + G   A+   +F    +  SA+ FI ++L + L  
Sbjct: 62  FARKAGKKLPYRISPLRTKLRLLRETGCVDAIWVLRFNQTFSEMSAQTFIDRLLRKTLNT 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTK 176
           + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ 
Sbjct: 122 RYLLIGDDFRFGAGREGCFELLAQQPDMQTECTPSVIVEDIRT------SSTAVRQALSD 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +       T
Sbjct: 176 GKLEYAKKLLGHDYVLSGKVKHGQKLGRTINSPTANVQLPPYHYALSGVFVVEADGAFGT 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE LK 
Sbjct: 236 R-RGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIEALKT 294

Query: 297 YMGEDEKKAR 306
            + +D + A+
Sbjct: 295 QILQDMEDAK 304


>gi|125747095|gb|ABN55909.1| bifunctional flavokinase/FAD-synthetase [Streptomyces davawensis]
          Length = 319

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 9/309 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI++  +  A     P  V++F+PHP+ +++  + 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIQHTVDRARELGLPAVVVTFDPHPKEVLRPGTH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +N S   FI KVL++ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMADLGVDAVLVLPFTTEFSNLSPADFIVKVLIDKLRAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AGD   L + G+ Y F    +D   + ++   Q  SS+  R  + +G V  A  +
Sbjct: 128 FGHRAAGDVMYLAELGKTYDFDVEVVDLFVSGEAGGGQPFSSTLTRRLVGEGDVEGAMEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG PTAN++  P   +  +GVYA     Q +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGVPTANVETLPHTAIPADGVYAGWLHAQGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NPT        +E+ + D    ++YG    V F  Y+R ++KF  ++ L   MGED K
Sbjct: 247 GTNPTF-DGTERTVEAHVIDRVGLDLYGLHVAVDFLAYVRGQVKFDSLDALIERMGEDIK 305

Query: 304 KARKILESS 312
            +R++  ++
Sbjct: 306 VSRELTAAA 314


>gi|238063390|ref|ZP_04608099.1| riboflavin biosynthesis protein ribF [Micromonospora sp. ATCC
           39149]
 gi|237885201|gb|EEP74029.1| riboflavin biosynthesis protein ribF [Micromonospora sp. ATCC
           39149]
          Length = 311

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 152/303 (50%), Gaps = 6/303 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
            + P+      V IG FDG+H GH   +   +  A    +   V++F+PHP  +++  S 
Sbjct: 8   DATPDGWGRSAVTIGVFDGVHRGHQATIGHTVARARELGVRSVVVTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++E +G   L    FT E +   AE F+  +LVE L    V+ G  FR
Sbjct: 68  PAVLTELGRKAELVEALGVDVLCVVPFTPEFSRLPAEAFVHDILVEHLHATLVVVGENFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD  +L++ G+ +GF  V    L    S + SS+ IR  +  G V  AA  LG 
Sbjct: 128 FGHRAAGDVALLERLGQTFGF-AVEDAPLVAEDSTVFSSTYIRARVDSGDVAAAAAALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYA-IRFRTQDQTSYSGVANFGR 246
              +E  V+ G++ GR LGFPTAN+   P   +  +GVYA    R + +       + G 
Sbjct: 187 PHRLEGVVVLGDQRGRELGFPTANLLCHPHAAVPADGVYAGWLLRKEGRERLPAAISVGT 246

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT        +E+ + DFS ++YG+R  + F  +LR +++F  +E L   M +D   AR
Sbjct: 247 NPTF-SGRERRVEAHVLDFSGDLYGERVALDFAAHLRGQVRFDGVEPLIAQMNQDVGLAR 305

Query: 307 KIL 309
           +IL
Sbjct: 306 RIL 308


>gi|225016943|ref|ZP_03706135.1| hypothetical protein CLOSTMETH_00858 [Clostridium methylpentosum
           DSM 5476]
 gi|224950337|gb|EEG31546.1| hypothetical protein CLOSTMETH_00858 [Clostridium methylpentosum
           DSM 5476]
          Length = 311

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 6/282 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VA+G FDG+H GH  ++ QA++ A    +  VLSF      I  S     T+   ++++ 
Sbjct: 18  VALGLFDGVHQGHRSVIAQAVEGAGEELLPVVLSFRTQ-HAIPASKKGYSTIITDTVKQS 76

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           IL  +G   LI   F L+  +Y+AE F++++L+  L  K ++ G  +RFGK  AG   +L
Sbjct: 77  ILTGLGVRLLIEPDF-LDIKDYTAEVFVREILINRLRAKQIVCGYDYRFGKGAAGSVELL 135

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           Q  G +YG     +  L +   + VSS+ IR  + +G +  A  LLGY +  +  VI G 
Sbjct: 136 QALGAQYGAEVTVMPPLLDG-GEPVSSTRIRRCIEQGEIEQANRLLGYDYCFDFPVIDGA 194

Query: 201 KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           K+GRT+G PT N    P+ L+ K GVYA  + T     Y GV N G  PT+      L E
Sbjct: 195 KLGRTIGVPTINQMFKPEFLIPKFGVYA-SYMTIGHRKYWGVTNVGIKPTVHNTSFPLAE 253

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + I  FS ++Y +R  V   +YLR E +F  I +LK  + E+
Sbjct: 254 THIIGFSGDLYKKRIKVHLVEYLRSEQRFSGIPELKKAIQEN 295


>gi|254974860|ref|ZP_05271332.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26]
 gi|255092247|ref|ZP_05321725.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932]
 gi|255313987|ref|ZP_05355570.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55]
 gi|255516667|ref|ZP_05384343.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34]
 gi|255649766|ref|ZP_05396668.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79]
 gi|260682922|ref|YP_003214207.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260686520|ref|YP_003217653.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
 gi|306519871|ref|ZP_07406218.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58]
 gi|260209085|emb|CBA62236.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260212536|emb|CBE03493.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
          Length = 309

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 158/284 (55%), Gaps = 9/284 (3%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLS 73
           ++K  V+ IGNFDG+H GH +++ + ++ A    I   V +F  HP    + +S    +S
Sbjct: 12  NIKESVITIGNFDGVHKGHQVLIGKTVEYAKKENIQSIVFTFANHPVNYFRPNSTKNIIS 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + K+LE +G   ++   F        A+ F+ ++LV+ L+ K ++ G  F F + +
Sbjct: 72  NDD-KIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKAKKIVIGHDFTFARAK 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +L+    ++GF    I  ++ N  + VSS+ IR+ +++G + N    LG  + +E
Sbjct: 131 EGNVNLLKSLEHEFGFEVEVIKPIKINDVR-VSSTYIRSLVSQGDMANVKEYLGRNYKLE 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIH + +GRT+GFPTAN+ L  ++L+ K G+YA      D+T Y G  N G NPT+  
Sbjct: 190 GCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET-YFGATNVGYNPTV-- 246

Query: 253 NGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           NG  L +E+ I +F ++IYG+   V F + +R E KF  I+ LK
Sbjct: 247 NGKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLK 290


>gi|167630363|ref|YP_001680862.1| riboflavin biosynthesis protein ribf [Heliobacterium modesticaldum
           Ice1]
 gi|167593103|gb|ABZ84851.1| riboflavin biosynthesis protein ribf [Heliobacterium modesticaldum
           Ice1]
          Length = 320

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 154/289 (53%), Gaps = 5/289 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDG+HLGH  ++ + +K A  S  T  V +F+PHP  +I+  +    ++P  ++ 
Sbjct: 15  VALGNFDGVHLGHQKLITEMVKKARASQGTAVVATFHPHPLRLIRPEAAPKLITPMDVKA 74

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L ++G   ++   F  + A  S E+F+Q+VL + L  + V+ G  + FG+   G   +
Sbjct: 75  GLLGRLGVDIVLILPFNPDLAKLSPEEFVQQVLHQDLRAELVLVGFNYSFGRGGKGTPEL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G + G     ID +     + VSS+ +R AL KG +  AA LLGY   +   V+ G
Sbjct: 135 LWELGHRLGVRVRVIDAV-TIAGEPVSSTAVRAALEKGDIERAADLLGYMPILRGPVVPG 193

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMVPNGPLL 257
           ++ GR +GF TAN++L P+  L   GVYA   R+   +     V N G  PT        
Sbjct: 194 DQRGRNIGFRTANIELPPEQYLPARGVYAAWVRSVSLSEGILAVVNIGVKPTFGTGLAET 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E+ + DF  ++YGQ  T+     +RPE++F+  E+L   +  D +  R
Sbjct: 254 VEAHLIDFEGDLYGQTLTLHLLRRMRPEMRFQSPEQLVEQIHRDLQDTR 302


>gi|332967817|gb|EGK06916.1| riboflavin biosynthesis protein RibF [Kingella kingae ATCC 23330]
          Length = 310

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 158/312 (50%), Gaps = 23/312 (7%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTII- 63
           I + QS P   +G  V IGNFDG+H GH  IL +      A N P   + F P P     
Sbjct: 3   IWLGQSAPYLPQGSAVTIGNFDGVHTGHRHILNRLATEAAARNLPAIAIVFEPQPAEFFA 62

Query: 64  ---QSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              + ++P   LSP   + ++L +      +   +F    AN  A+ F Q VL E L  +
Sbjct: 63  QQARKTAPS-RLSPLRDKLQLLAQTSSLHGVWVQRFNPTFANTPADVFTQTVLRERLNTR 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV-----SSSNIRTAL 174
            ++ G  FRFGK R GD  +L  + +       F+ E  N  S ++     SS+ +R AL
Sbjct: 122 YLLVGDDFRFGKARGGDFDLLCAQSD-------FVTE--NTPSILIAGERASSTAVRQAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G++  A  +LG+ +T+   V HG K+GRT+G PTAN+ LS      +GV+ +   T  
Sbjct: 173 AAGNLPRAEQILGHGYTLSGRVKHGAKLGRTIGCPTANIHLSNHAYALQGVFVVE-ATGA 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               +GVA+FGRNPT+       LE  +FDF+ ++YG+R  + F   LR E +F D+  L
Sbjct: 232 FGRRAGVASFGRNPTVSHTPEAKLEVHLFDFAGDLYGERLHIRFLHKLRDEERFADLSSL 291

Query: 295 KIYMGEDEKKAR 306
           +  +  D + A+
Sbjct: 292 QTQIAADMQAAK 303


>gi|303247308|ref|ZP_07333581.1| riboflavin biosynthesis protein RibF [Desulfovibrio fructosovorans
           JJ]
 gi|302491222|gb|EFL51111.1| riboflavin biosynthesis protein RibF [Desulfovibrio fructosovorans
           JJ]
          Length = 312

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           + L G  + IGNFDG+H+GH  +L++      A +     L+F+PHPR ++  S+     
Sbjct: 12  DALNGVCLTIGNFDGVHMGHAKLLQRVCDRAAAASLVSVALTFDPHPRQVLLGSA----- 66

Query: 73  SPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           +PP+I       + +E  G    +   FT E A    E F+++ LVE L ++ ++ G  +
Sbjct: 67  APPAITSTEQKLECIEAQGIQVAVVLPFTREVAAREPEDFVREALVEGLSLRHLVIGYDY 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK R G+  +L   G+  GF    +D +  N + +VSS+ IR  +  G V +A  LLG
Sbjct: 127 AFGKGRRGNFDLLTALGQNLGFTVERLDPVIINGA-VVSSTRIRDMVQAGKVWDARPLLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
               +   V HG+K GR LGFPTAN+    +++   GVYA+ +         GVAN G+N
Sbjct: 186 RFHQVRGLVAHGQKRGRKLGFPTANLSFKDELVPLTGVYAV-WVEFGGVIRPGVANIGKN 244

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT      + +E+ + DF  +IYG+   V F   +R E KF   ++L   + ED   AR 
Sbjct: 245 PTF-GEFEMSVEAHVLDFKGKIYGEPIRVHFVQRIRSEKKFSGPDELAARIREDIGLARM 303

Query: 308 ILES 311
           IL +
Sbjct: 304 ILAA 307


>gi|189220158|ref|YP_001940798.1| FAD synthase [Methylacidiphilum infernorum V4]
 gi|189187016|gb|ACD84201.1| FAD synthase [Methylacidiphilum infernorum V4]
          Length = 334

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 156/292 (53%), Gaps = 2/292 (0%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  ILE+ + +       VLSF+PHP  +I       +L   S ++ +
Sbjct: 44  IAIGVFDGLHLGHQKILERLLSLGTAENCLVLSFDPHPLAVISPEQAPPSLLSLSQKKNL 103

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L   G   ++  +F        AE F+  +   +  ++ V+ G  FRFG +  G+   L+
Sbjct: 104 LHLYGIKHILFVQFDQRLRQLRAELFLITLKKIFPRLRAVVVGEDFRFGLNAEGNVAFLK 163

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +RG      TV +  L     + +SS+ IR A+ + +   A+ LLG  + IE  V  G  
Sbjct: 164 ERGRNLRVQTVVVPPL-IRYGEPISSTRIRKAIVQRNFWLASELLGRSYKIEGYVAAGRG 222

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            G+ +GFPTAN++    +L   GVY  +   +++  + GVAN+GR PT+   G L+LE  
Sbjct: 223 AGKEIGFPTANLEGIAQLLPPPGVYGCQVEYKNEF-FFGVANYGRRPTVQDGGELVLEVH 281

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           + +FS ++YG++ ++  F +LR E KF  + +LK  + +D +KA++     +
Sbjct: 282 LLNFSGDLYGEKLSLFNFQFLREEKKFLSLPELKSQIEKDIQKAKEFFMPKF 333


>gi|322382342|ref|ZP_08056249.1| riboflavin kinase/FMN adenylyltransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153695|gb|EFX46070.1| riboflavin kinase/FMN adenylyltransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 312

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 163/316 (51%), Gaps = 13/316 (4%)

Query: 1   MHVFH-NIEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M + H N  I++S+ + L +  V+AIG FDG+HLGH  ++ +A+ +A+    P  V++F 
Sbjct: 2   MEMIHLNYPIDKSVISKLPEKQVMAIGQFDGVHLGHQEVIGRALSMASEKKIPSAVMTFY 61

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+ ++        ++P   +   LEK+G        F       SAE F+++VL+  L
Sbjct: 62  PHPKEVLGQQIYTDVITPLDHKMDCLEKLGIDYAYVLHFDESLMKLSAETFVEEVLIP-L 120

Query: 117 EVKTVITGTKFRFGKDRAG--DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            V  ++ G  F FG    G  D+ I    G +YG   V       N  +  SS+ IR+AL
Sbjct: 121 NVADLVIGFDFTFGYKGLGTPDKLIEWSNG-RYGVEVV--SPFTQNGIK-TSSTEIRSAL 176

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ 233
             G V+ A  LLG  ++I   VI G++ GRT+GFPTANM +  P +    GVYA+    +
Sbjct: 177 KDGDVMYANELLGRYYSIRGKVIGGDRRGRTIGFPTANMDIKEPYVTPAIGVYAVYTWVK 236

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  Y GV + G  PT   +  + LE  I DF + IYG+     F  +LRPE KF  +E 
Sbjct: 237 GK-RYKGVMSIGTKPTFSSDKRITLEVHILDFHETIYGEDIQADFVCFLRPEKKFSSVEA 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   + +D K A   L
Sbjct: 296 LVAQIQQDVKAAETKL 311


>gi|291523281|emb|CBK81574.1| riboflavin kinase/FMN adenylyltransferase [Coprococcus catus GD/7]
          Length = 310

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 13/297 (4%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTII--QSSSPIFTL 72
           HL   VVA+G FDG+H GH L++ +  +       TV+ +F+ HP +++  +  S I+T 
Sbjct: 11  HLDHTVVALGKFDGLHRGHQLLINKLKEYGKKGFQTVVFTFDFHPMSLLTGKKQSLIYTK 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                + +I+E+MG   LI Y FT ETA+   E F++ VLV  +  K ++ G  F FG  
Sbjct: 71  EE---RLRIVEEMGIDVLIEYPFTQETAHMMPEDFVRDVLVRDIGAKVIVVGDDFHFGYQ 127

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   L+K    YG+     ++L  +  +I SS+ IR  + +G +     LLG  + I
Sbjct: 128 RSGDVSFLKKHAAAYGYVVDNCEKLCVHGEEI-SSTMIRGYIAEGRMETVTELLGRPYEI 186

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQD-QTSYSGVANFGRNP 248
              VI G+  GR +   TAN  L+PD   +L  EGVYA   + +  +  Y  + N GRNP
Sbjct: 187 NGKVIPGKANGRKVDMRTAN--LAPDDIKLLPPEGVYASVVQIEGMEGKYYALTNIGRNP 244

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           T+  +  L +E+ + +FS ++Y +  TV  +  LR E KF  +E++K  + +D++KA
Sbjct: 245 TVGDHNELRIETHVVEFSGDLYDRMITVRIYQRLRDEHKFASLEEVKAQVMKDQEKA 301


>gi|319943231|ref|ZP_08017514.1| riboflavin biosynthesis protein RibF [Lautropia mirabilis ATCC
           51599]
 gi|319743773|gb|EFV96177.1| riboflavin biosynthesis protein RibF [Lautropia mirabilis ATCC
           51599]
          Length = 329

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 160/317 (50%), Gaps = 19/317 (5%)

Query: 7   IEINQSLP-NHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           ++I +SLP  HL +   + IGNFDG+HLGH  ++   +  A  +  P  VL+F PHPR  
Sbjct: 1   MKILRSLPPAHLDQPCALTIGNFDGVHLGHQALVRTLVADAREAGLPAAVLTFEPHPREY 60

Query: 63  IQS----------SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
             +            P+  +S    + ++L  +G   +    F    A + AE F++  L
Sbjct: 61  FHALARQRGRDVGPEPV-RISTLRDRLEMLASLGVDRVHLAPFDQRVAQWPAEDFVRNCL 119

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            + L+ + +  GT F FG  R GD G+L+  G++ G   + +  + +   +I SSS IR 
Sbjct: 120 AQGLQARHIRIGTDFCFGAQRQGDFGMLKSVGQQCGIRVLAMPTVEDAGVRI-SSSLIRE 178

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR--- 229
           AL +     AA +LG  + I   V HG ++G  LGFPT N++        +G++ ++   
Sbjct: 179 ALLQADFPWAAQMLGRPYAISGRVSHGRRLGTRLGFPTLNLRFPWGRPALQGIFVVQVYG 238

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
                  +  GVA+FG  P +  +G  LLE  + D+S + YG+   V F + LR E+ F 
Sbjct: 239 LSDDPAQAVPGVASFGTRPAVEADGAWLLEVHLLDWSGDAYGRLVRVEFLEKLRDELPFP 298

Query: 290 DIEKLKIYMGEDEKKAR 306
           D++ L   + +D +KAR
Sbjct: 299 DLDSLGRQIADDVRKAR 315


>gi|110637357|ref|YP_677564.1| bifunctional riboflavin kinase/FAD synthetase [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280038|gb|ABG58224.1| bifunctional protein: riboflavin kinase; FAD synthetase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 309

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 166/298 (55%), Gaps = 11/298 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ-SSSPIFTLSPPS 76
            VV IG FDG+H+GH  IL +  ++++  N    +++F PHPR +++  + PI  L+  +
Sbjct: 16  AVVTIGAFDGVHIGHKKILNRLTELSSLVNGESVLITFWPHPRFVLKKDAEPIGLLN--T 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EKI  L+      L+   F  E +  +A+ FI+ +L++ +  + ++ G   RFG +R 
Sbjct: 74  LEEKIHLLDTYNIDHLLILNFNEEFSKLTADAFIENILIKSIGTRYLVLGYDHRFGNNRE 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L    E++   ++ I + +  +S  +SS+ IR AL  G    A   LGY + +  
Sbjct: 134 GSIDYLNANKERFEIESIEIPK-QEIESLAISSTLIRKALLNGDSTVANQNLGYPYLLRG 192

Query: 195 DVIHGEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            VI G K+GRT+GFPTAN+  +    ++ K GVYA+    + +  Y G+ N G  PT+  
Sbjct: 193 FVIEGNKLGRTIGFPTANIFIEDQDKLIPKNGVYAVYAYIEGE-RYKGMLNIGVRPTINN 251

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    +E  IFDF+Q+IYG+   +    Y+R E+KF  I+ L + + +DE + R IL+
Sbjct: 252 DKRRTIEVHIFDFNQDIYGKTVRLELITYIRDEVKFSGIDTLILQLKQDEIETRAILK 309


>gi|313200305|ref|YP_004038963.1| riboflavin biosynthesis protein ribf [Methylovorus sp. MP688]
 gi|312439621|gb|ADQ83727.1| riboflavin biosynthesis protein RibF [Methylovorus sp. MP688]
          Length = 302

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 20/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF +   +   P       +AIGNFDG+HLGH  +L Q +++A    +   V++F PH
Sbjct: 1   MRVFRHFPASGERPP----AALAIGNFDGVHLGHQALLRQLVQVAAARGLQPVVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR           L+  S++EK+    + G + +    F    A   A  F+Q +L   L
Sbjct: 57  PREFFTPLQAPARLT--SLREKLEHFIEAGVADVYVCHFNQRFAALEASAFMQDILRGQL 114

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  FRFG  R G  G+   R   +   +V   +L  ++   +SS+ +R AL  
Sbjct: 115 NAEAILVGDDFRFGARRQG--GLDDLRQAGFALESVPEIQLDGDR---ISSTRVRQALHD 169

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A+ LLG  ++I   V+HG K+GR LGFPTAN+ +  +     GVYA++       
Sbjct: 170 GDLPLASALLGRYYSISGKVVHGRKLGRQLGFPTANIHMRHERPALTGVYAVKL-----D 224

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN G  PT+     L LE  + D+S ++Y +   VSF   LR E+KF  ++ LK 
Sbjct: 225 GLPGVANLGVRPTIAGTPRLSLEVHLLDYSGDLYDRHVHVSFLKKLRDEMKFPGLDALKQ 284

Query: 297 YMGEDEKKARKILES 311
            +  D  +AR    S
Sbjct: 285 QIALDSAQARTFFAS 299


>gi|260771135|ref|ZP_05880062.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii CIP
           102972]
 gi|260613732|gb|EEX38924.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii CIP
           102972]
 gi|315179259|gb|ADT86173.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii NCTC
           11218]
          Length = 311

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 153/294 (52%), Gaps = 6/294 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L+Q  + A   N P  V++F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQQVLDQVAERAKALNLPSVVMTFEPQPMELFLKDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+    L+   F    AN  A+ FI+ +LV  L VK ++ G  F FG+ R G+
Sbjct: 76  DKFVQLGKLNLDRLLCVNFNHHFANLDAQAFIRDLLVTRLGVKFLVVGDDFCFGQGRKGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ G +YGF  V        K + VSS+ IR AL    + +AA +LG  ++I   V
Sbjct: 136 FAMLEQAGREYGFEVVSTQSFCLQKLR-VSSTAIREALAADALADAADMLGRDYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-P 255
            HG K+GRT+GFPTAN+ L   +    GVY +      +    GVAN G+ PT+  NG  
Sbjct: 195 SHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGEQPIGGVANIGQRPTV--NGVR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  +FDF   +YG++  V+    LR E KF+  E LK  +  D + AR  L
Sbjct: 253 QQLEVHLFDFHGNLYGKQLEVALLHKLRNEHKFESFEALKQQIELDAEAARVWL 306


>gi|90407185|ref|ZP_01215373.1| hypothetical protein PCNPT3_03141 [Psychromonas sp. CNPT3]
 gi|90311761|gb|EAS39858.1| hypothetical protein PCNPT3_03141 [Psychromonas sp. CNPT3]
          Length = 309

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 4/298 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPI 69
           +L    +G V++IGNFDGIHLGH ++L + ++ A     P  +++F P P  +   +   
Sbjct: 9   NLKTRHQGCVLSIGNFDGIHLGHQIVLSRLLQEAKRLRVPSMLMTFEPQPAELFLGAKAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             LS    +   L+K+    L+   FT E AN  A  FI ++L++ L VK ++ G  F F
Sbjct: 69  ARLSRLRDKFVQLQKLKLDRLLCISFTREFANMEAHTFINELLIKKLNVKFLVVGDDFHF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R G+  +L++ G+K GF  +    L +   +I SS+ IR  L  G +  A  +LG +
Sbjct: 129 GYQRKGNFELLKEAGKKQGFVVLDTQSLMHQDLRI-SSTAIRQFLASGELQQAQKMLGRK 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V HG+K+GRT+G PTAN+ L   +    GV+ +  +      Y GVAN G  PT
Sbjct: 188 YNIAGRVSHGKKLGRTIGVPTANIFLKRRVAPVSGVFVVSVQGIAGRIYRGVANIGTRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            V      LE  I +F  ++YG +  V     LR E+KF   + LK  + +D  +A++
Sbjct: 248 -VNGTEQQLEVHILNFEGDLYGSQLQVILEKKLRDEVKFCSFDALKEQIKKDITQAQQ 304


>gi|317493352|ref|ZP_07951774.1| riboflavin biosynthesis protein RibF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918745|gb|EFV40082.1| riboflavin biosynthesis protein RibF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 312

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 150/299 (50%), Gaps = 4/299 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L +  +       P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLTRLKQEGKRLGLPVMVMIFEPQPLELFSADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L   G   L+  +F  + A  SA  F++K+LVE L VK ++ G  FRFG  R GD
Sbjct: 76  DKCHYLADAGVDYLLCVRFNRDFAANSAHDFVKKLLVEKLGVKYLMVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+  G ++GF     D       +I SS+ +R AL +  +  A  LLG+ ++I   V
Sbjct: 136 YELLKLAGAQFGFTVTNSDSFCEGNKRI-SSTAVRQALQEDKLDLAESLLGHPYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V     
Sbjct: 195 VHGDEVGRTMGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPLPGVANIGTRPT-VAGIRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LE  + D + ++YG+   V     LR E +F  ++ LK  +  D   AR     + P+
Sbjct: 254 QLEVHLLDTTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARAFFGLATPV 312


>gi|239982644|ref|ZP_04705168.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
 gi|291454484|ref|ZP_06593874.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
 gi|291357433|gb|EFE84335.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
          Length = 321

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 163/311 (52%), Gaps = 9/311 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A  +  P  V++F+PHP  +++  + 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERAREAGLPTVVVTFDPHPSEVVRPGTH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + ++  ++G  AL+   FT E +  S  +F+ KVLV+ L  + V+ G  FR
Sbjct: 68  PPLLAPHHRRAELCAELGVDALLVLPFTREFSQLSPAEFVAKVLVDRLHARLVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFID-ELRNNKSQIV--SSSNIRTALTKGHVLNAAHL 185
           FG   AGD  +L + G  Y +    +D  +R      V  SS+  R  + +G V  AA +
Sbjct: 128 FGHRAAGDVAVLTELGATYDYEVEVVDLVVRGAAGGGVPFSSTLTRRLVAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA     + +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPYTAIPADGVYAGWLNAEGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YGQ  +V F  ++R + KF  +++L   M  D  
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGQHVSVDFLAFVRGQAKFASLDELLEAMSRDVA 305

Query: 304 KARKILESSYP 314
           + R+++ ++ P
Sbjct: 306 RCRELVAAAEP 316


>gi|187735253|ref|YP_001877365.1| riboflavin biosynthesis protein RibF [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425305|gb|ACD04584.1| riboflavin biosynthesis protein RibF [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 311

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 23  AIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           A+G FDG+HLGH  ++  A+K  + +     VL+F  HP   ++  S      PP+I  +
Sbjct: 20  AVGMFDGVHLGHAGVIAAAVKGAVLDGGIPAVLTFRTHPLARVRPES-----VPPAIMGE 74

Query: 81  ------ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
                 ++E++G  A++  +F+   A+ S E+FI + L     V  +  G  + FG+ RA
Sbjct: 75  DAEKFALMEELGVKAVLSLEFSSRLASMSPEEFIGE-LCSSCRVAQIAVGEDWHFGRGRA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   L+    +YGF    +  +  +  +I SS+ IR A+ +   L  A +LG  +  + 
Sbjct: 134 GNVETLRLLSCRYGFRVTAVPPILQDGERI-SSTRIREAVREADFLQVAGMLGRPYRWKG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PN 253
            VIHG ++GR L +PTAN++    +    GVYA+R R   +  Y GVAN G  PT+    
Sbjct: 193 PVIHGRQLGRLLDYPTANIRPGCGLQPPHGVYAVRARVAGK-KYGGVANLGVRPTVEGET 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           G LLLE+ +F    +IYG+   V    +LRPEIKF  +E+LK
Sbjct: 252 GELLLETHLFGHPGDIYGREMEVEPVRFLRPEIKFPSLEELK 293


>gi|282860215|ref|ZP_06269288.1| riboflavin biosynthesis protein RibF [Prevotella bivia JCVIHMP010]
 gi|282586998|gb|EFB92230.1| riboflavin biosynthesis protein RibF [Prevotella bivia JCVIHMP010]
          Length = 318

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 7/308 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS 66
           +N+    HL   V  IG FDG+H GH  ++E   +IA  + +   V++F+ HPR ++   
Sbjct: 6   LNKREQKHLTALVATIGFFDGVHRGHQFLIENVKRIAKQAGMQSAVITFDLHPRQVLHPD 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                LS    +   +E  G    I   F    +  SA++F+Q +L E L V+ ++ G  
Sbjct: 66  QSPSLLSSLDQKLAHIEATGIDNCIVLHFDKALSQLSAKEFMQTILKEQLNVQKLVIGYD 125

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +FG +R       Q+ G+K G   V    L +   + +SSS +R  +  G +  A H L
Sbjct: 126 NKFGHNRTEGFEDYQRYGKKLGIEVVENMAL-DTADEHISSSVVRKHIKNGEIKAANHDL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFRTQ-DQTSYSGVAN 243
           GY +T+E  ++ G + G  LG+PTANM  +    +L  +GVYA++ +T   +T   G+  
Sbjct: 185 GYIYTLEGKIVTGFQNGHKLGYPTANMDPKTCLQLLPADGVYAVKVKTDLSETWLDGMLY 244

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT   N  L +E+ IF+F +E+YG    ++  D +R + KF+ +E L + +GED+ 
Sbjct: 245 IGVRPTYNGNA-LCIETNIFNFDKELYGHNIKLALIDRVRDDKKFESLEALSLQLGEDKL 303

Query: 304 KARKILES 311
           K  +IL+ 
Sbjct: 304 KCEEILKD 311


>gi|239991159|ref|ZP_04711823.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 11379]
          Length = 318

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  K VI G  FR
Sbjct: 68  PPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHAKAVIEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G  Y +    ID     ++   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D  S     + 
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-DGESMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R  +KF  I++L + M  D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDFLAYVRGMLKFDSIDELLVAMAADVK 305

Query: 304 KARKI 308
           ++ ++
Sbjct: 306 RSSEL 310


>gi|295098545|emb|CBK87635.1| FMN adenylyltransferase /riboflavin kinase [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 308

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 4/291 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLELFAGEKSPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ F+  +LV  L V+ +  G  FRFG  R GD
Sbjct: 76  EKLRYLAESGVDYVLCVRFDRRFAALTAQNFVSDLLVRQLGVQFLAVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             + VSS+ +R AL    +  A  LLG+ FTI   V
Sbjct: 136 FLLLQKAGLEYGFDVTSTMTFCEGGVR-VSSTAVRQALANDELDTAETLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRT+GFPTAN+ L   +   +GVYA+      +  + GVAN G  PT V     
Sbjct: 195 VHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPFYGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARE 304


>gi|154506283|ref|ZP_02043021.1| hypothetical protein RUMGNA_03825 [Ruminococcus gnavus ATCC 29149]
 gi|153793422|gb|EDN75842.1| hypothetical protein RUMGNA_03825 [Ruminococcus gnavus ATCC 29149]
          Length = 301

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 147/284 (51%), Gaps = 16/284 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +G FDG+H GH  ++ +  + A+   +   V +F+     ++              +
Sbjct: 19  AVTLGKFDGLHRGHQELISRIQRFADQEKAESVVFAFDMGKEALMTGE-----------E 67

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +K   +     LI   FT       AE+FI+K+L+E L    +  GT F FG  + GD  
Sbjct: 68  KKAYLEGCVDTLIICPFTEAIREMEAEEFIEKILIEQLHAAYIAVGTDFHFGHQKRGDIC 127

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++  ++YG+    +++    K +I SS+ IR AL  G+V  A  LLGYR+  E  V H
Sbjct: 128 MLKQYAKRYGYELEIVEKAVYRKREI-SSTYIREALKVGNVELAEKLLGYRYRTEGVVEH 186

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+K+GRTLGFPT N+   P+    + GVYA R +  D T Y G+ N G  PT+     +L
Sbjct: 187 GQKLGRTLGFPTLNVAWKPEKAAPRFGVYACRVKM-DGTWYCGIGNLGIKPTVTDAKRIL 245

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            E ++FD+  + YG+   + F  + RPE +F  +E+LK  +  D
Sbjct: 246 TEVYVFDYKGDAYGKYVEIEFCAFERPESRFASLEELKTQVDRD 289


>gi|298491900|ref|YP_003722077.1| riboflavin biosynthesis protein RibF ['Nostoc azollae' 0708]
 gi|298233818|gb|ADI64954.1| riboflavin biosynthesis protein RibF ['Nostoc azollae' 0708]
          Length = 356

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 161/348 (46%), Gaps = 56/348 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA---------------------NNSPI----- 50
           L    VA+G FDG+H+GH  +++  +  A                     N +P+     
Sbjct: 11  LTPTAVALGKFDGVHIGHQRVIQPILPSAQDQERRGNGENLAEKSTLPTGNLTPLESQKK 70

Query: 51  ----TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
               TV++F+PHP     +  P   L+P   + + L  +G   L+   F  E +  S + 
Sbjct: 71  RIHSTVVTFDPHPHEFF-TGQPRTLLTPLDEKVEQLRSLGVEQLVLLPFDKELSALSPQD 129

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF------IDELRNN 160
           F+ K+LV+ L+ + +  G  F FGK R G    LQ    K+            IDEL   
Sbjct: 130 FVAKILVQQLQCQQISVGEDFCFGKKRTGTAKDLQTLAAKFNIPVTIVPIQTDIDELSTK 189

Query: 161 KSQI---------VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
            S I         +S+S IR +L  G +  A  LLG  +T+   VI G+K+GRT+GFPTA
Sbjct: 190 SSDINTTLTENNRISTSLIRQSLEAGDIEKANRLLGRPYTLTGVVIPGQKLGRTIGFPTA 249

Query: 212 NMQLSPDILLK-EGVYAIRFRTQDQTSYS------GVANFGRNPTMVPNGP-LLLESFIF 263
           N+QL  D  L  +GVYA+R     Q          GV N G  PT+  NG    +E  +F
Sbjct: 250 NLQLPKDKFLPHQGVYAVRVVIHSQNPEVSANENLGVMNIGNRPTV--NGTHFAVEVHLF 307

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           D+  ++Y +   V    +LRPE KF  +E LK  +  D   AR+IL S
Sbjct: 308 DWPDDLYSKELVVQLVKFLRPEQKFPSLEALKTQIQLDCTVAREILAS 355


>gi|307331632|ref|ZP_07610740.1| riboflavin biosynthesis protein RibF [Streptomyces violaceusniger
           Tu 4113]
 gi|306882707|gb|EFN13785.1| riboflavin biosynthesis protein RibF [Streptomyces violaceusniger
           Tu 4113]
          Length = 318

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 9/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +  +   F+ KVLV+ L  + V+ G  FR
Sbjct: 68  PPLLAPHQRRAELMAGLGVDAVLVLPFTTEFSRLTPADFVAKVLVDKLHARVVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L++ G  Y +    ID     ++   +  SS+ +R  + +G V  A  +
Sbjct: 128 FGHKAAGNVAFLRELGTTYDYEVEVIDLYERGEAGGGEPFSSTLVRRLVAEGDVAGAMEV 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     + +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANLETPPHTAIPADGVYAGWLTARGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  YLR + KF  IE L   M  D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAYLRGQEKFDSIEALLERMAADVK 305

Query: 304 KARKILE 310
           +AR+++E
Sbjct: 306 RARELVE 312


>gi|37519786|ref|NP_923163.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
 gi|35210777|dbj|BAC88158.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
          Length = 302

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 9/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            VA+GNFDG+HLGH  +++  +  A     TVL+F+PHPR      +  F L+P   +  
Sbjct: 15  AVALGNFDGVHLGHQAVIQAVLGRAGIP--TVLTFDPHPREYFTGKTG-FLLAPERERTA 71

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            +  +G + ++   F    A   A  F+++VLV  L  + V  G  FRFGK+RAG   +L
Sbjct: 72  AILALGIAQVLVLPFDELLAATEAGAFVEQVLVAGLGARFVSVGWNFRFGKERAGTTEML 131

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           Q       F    + E R  + + VSSS IR AL  G +  A  LLG  + +E +V+ G+
Sbjct: 132 QSYARAGAFDIEILAE-RQVRGRRVSSSVIREALGCGDLDLARLLLGRAYGLEGEVVRGD 190

Query: 201 KIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLLL 258
           + GR LGFPTAN+Q+S    L K+GVY +  R   Q  + G+ N G  PT   +G    +
Sbjct: 191 QRGRLLGFPTANLQVSGRKFLPKDGVYLVSARWGVQQRW-GLLNLGLRPTF--DGLKRTI 247

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E  + D+  ++YGQ   ++   YLRPE KF    +L   +  D + A K
Sbjct: 248 EVHVLDWEGDLYGQHIKITLERYLRPEQKFGSPGELVAQLHRDREAALK 296


>gi|238918621|ref|YP_002932135.1| riboflavin biosynthesis protein RibF, [Edwardsiella ictaluri
           93-146]
 gi|238868189|gb|ACR67900.1| riboflavin biosynthesis protein RibF, putative [Edwardsiella
           ictaluri 93-146]
          Length = 331

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 155/304 (50%), Gaps = 4/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L +  +  +    P+ V+ F P P  +    +    L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHRALLARLRQEGDRLGVPVMVMIFEPQPLEMFAPQNAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G  A++   F  + A++SA+ F++ +LVE L VK ++ G  FRFG  R G
Sbjct: 75  RDKCRYLADAGVDAVLCVGFDRQFASHSAQDFVKHLLVERLGVKFLMIGDDFRFGAGREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ  G+ YGF TV          + VSS+ +R AL    +  A  LLG+ + I   
Sbjct: 135 DYQMLQAAGKVYGF-TVTNSLSFCVGDRRVSSTAVRHALRHDDLALAESLLGHPYRIAGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V    
Sbjct: 194 VVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPLPGVANIGTRPT-VAGIR 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   AR+   +    
Sbjct: 253 QQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQIAQDVVAAREFFWADNTG 312

Query: 316 SERD 319
            E D
Sbjct: 313 PEPD 316


>gi|304316858|ref|YP_003852003.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778360|gb|ADL68919.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 310

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 8/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHP-RTIIQSSSPIFTLSPPSI 77
           V+A+GNFDGIHLGH  ++++AI+++  + I+    +F  H  +TI ++  P   ++    
Sbjct: 17  VIALGNFDGIHLGHQELIKKAIELSKVNKISSSAFTFRQHTMKTICENKFPKLLITNRKK 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            E+  + M   A+I Y F  + +  S E FI+ +L++ L +K  I G  +RFG   +GD 
Sbjct: 77  LEEFSKFMLDYAII-YDFNKDFSLLSPENFIKDILIDKLNMKIAIVGENYRFGYRASGDI 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+   + Y +    I+ ++ N+  ++SSS IR+ + +G +  A   LG  F++E  VI
Sbjct: 136 QLLKSFSKIYDYKVEVIEPVKLNEI-VISSSYIRSLIQEGKIEEANKCLGRYFSLEGYVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G K+GR LGFPTAN+ +  D +L   GVY  + +  ++  + G+ N G NPT   N  L
Sbjct: 195 SGRKVGRKLGFPTANISIDRDYILPLNGVYLTKVKILNKY-FLGITNVGINPTFNVNN-L 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            +E++I DF++ IYG    V F   +R EIKF   E+L   M ED
Sbjct: 253 SVETYIIDFNKNIYGMFIEVEFIKRIRDEIKFNSEEELIEQMKED 297


>gi|228902312|ref|ZP_04066469.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 4222]
 gi|228909633|ref|ZP_04073456.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 200]
 gi|228940897|ref|ZP_04103456.1| FMN adenylyltransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228966754|ref|ZP_04127798.1| FMN adenylyltransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228973826|ref|ZP_04134402.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980415|ref|ZP_04140725.1| FMN adenylyltransferase [Bacillus thuringiensis Bt407]
 gi|228779235|gb|EEM27492.1| FMN adenylyltransferase [Bacillus thuringiensis Bt407]
 gi|228785851|gb|EEM33854.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792853|gb|EEM40411.1| FMN adenylyltransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228818733|gb|EEM64799.1| FMN adenylyltransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228849922|gb|EEM94753.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 200]
 gi|228857281|gb|EEN01784.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 4222]
          Length = 335

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA++      V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S 
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQEYFASE 325


>gi|21673083|ref|NP_661148.1| riboflavin biosynthesis protein RibF [Chlorobium tepidum TLS]
 gi|21646154|gb|AAM71490.1| riboflavin biosynthesis protein RibF [Chlorobium tepidum TLS]
          Length = 321

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 155/293 (52%), Gaps = 14/293 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS--SPIFTLSPPSI 77
           V IG+FDG+H+GH  I+   I  A    +   V++F PHPR +++     P+  L+  + 
Sbjct: 29  VTIGSFDGLHVGHRKIVGSMIGHARELGLRSVVVTFEPHPRIVLEGGDGCPVRLLT--TF 86

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            EKI     M    L   +F  + A+ S+E FI++VLV+ L  + V  G    FGK R+G
Sbjct: 87  DEKISQFSSMPIDLLFVVRFDRQFASKSSEAFIREVLVKMLGARHVTVGYDHGFGKRRSG 146

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L   G + GF    + E+    S  VSS+ IR  L    + +A   LG  + I   
Sbjct: 147 SEETLHMLGAECGFGVDVVGEVIVAGSP-VSSTRIRGLLEAARIRDANECLGAPYAISGT 205

Query: 196 VIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           V+ G+K+GRT+GFPT N+ L PD   ++   GVYA      D   YS + N GR PT+  
Sbjct: 206 VVEGDKLGRTIGFPTVNLAL-PDRCKMVPAHGVYAASIEI-DGREYSAMMNIGRRPTVSE 263

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           +G + +E+ I  FS ++YG+   V   D++R E +F  I++L+  +  D+K+A
Sbjct: 264 DGEVRVEAHIIGFSGDLYGRFLIVRMLDFIREERRFASIDELRTQLELDKKEA 316


>gi|126698913|ref|YP_001087810.1| riboflavin biosynthesis protein [Clostridium difficile 630]
 gi|255100336|ref|ZP_05329313.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42]
 gi|255306273|ref|ZP_05350444.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255]
 gi|115250350|emb|CAJ68172.1| Riboflavin biosynthesis protein [Clostridium difficile]
          Length = 309

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 158/284 (55%), Gaps = 9/284 (3%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLS 73
           ++K  V+ IGNFDG+H GH +++ + ++ A    I   V +F  HP    + +S    +S
Sbjct: 12  NIKESVITIGNFDGVHKGHQVLIGKTVEHAKKENIQSIVFTFANHPVNYFRPNSTKNIIS 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + K+LE +G   ++   F        A+ F+ ++LV+ L+ K ++ G  F F + +
Sbjct: 72  NDD-KIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKAKKIVIGHDFTFARAK 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +L+    ++GF    I  ++ N  + VSS+ IR+ +++G + N    LG  + +E
Sbjct: 131 EGNVNLLKSLEHEFGFEVEVIKPIKINDVR-VSSTYIRSLVSQGDMANVKEYLGRNYKLE 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIH + +GRT+GFPTAN+ L  ++L+ K G+YA      D+T Y G  N G NPT+  
Sbjct: 190 GCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET-YFGATNVGYNPTV-- 246

Query: 253 NGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           NG  L +E+ I +F ++IYG+   V F + +R E KF  I+ LK
Sbjct: 247 NGKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLK 290


>gi|282898908|ref|ZP_06306892.1| hypothetical protein CRC_00198 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196219|gb|EFA71132.1| hypothetical protein CRC_00198 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 336

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 168/331 (50%), Gaps = 28/331 (8%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA------IKIANNSPI--TVLSFNP 57
           +I +  S    L    VA+G FDG+HLGH  ++E          I N   I  TV++F+P
Sbjct: 10  SIWVAASTDQILTPTAVALGKFDGVHLGHQRVIEPVRNSHTQDNIDNIKSIHSTVVTFDP 69

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP     S  P   L+P   + + L+ +G   L+   F  E +  S   F++K+LV+ L+
Sbjct: 70  HPEEFF-SGQPRSLLTPLVEKIECLQGLGIDQLVLLPFDRELSALSPRDFVEKILVQQLQ 128

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------------DELRNNKSQIV 165
            + +  G  F FG+ R G    LQ     Y      +            D+  + +   +
Sbjct: 129 CRKISVGEDFCFGQKRLGTARDLQILAGLYNIPVNIVPIQMDMINLPANDDTIDGQENRI 188

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEG 224
           S+S IR +L+ G V  A  LLG  +T+   V+ G+K+GRT+GFPTAN+QL  D  L ++G
Sbjct: 189 STSLIRESLSLGDVPRANRLLGRPYTLSGIVVTGKKLGRTIGFPTANLQLPQDKFLPRQG 248

Query: 225 VYAIR--FRTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDY 281
           VYA+R    T  Q    GV N G  PT+  NG  L +E  +FD+  ++YG++  +   ++
Sbjct: 249 VYAVRALIDTSPQVIL-GVMNIGNRPTV--NGYSLSVEVHLFDWEGDLYGRQLVLELVEF 305

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LRPE KF ++E LK  +  D   A+ +  +S
Sbjct: 306 LRPEQKFPNLEALKQQIELDCVTAKHVFAAS 336


>gi|226323223|ref|ZP_03798741.1| hypothetical protein COPCOM_00995 [Coprococcus comes ATCC 27758]
 gi|225208413|gb|EEG90767.1| hypothetical protein COPCOM_00995 [Coprococcus comes ATCC 27758]
          Length = 310

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 151/287 (52%), Gaps = 11/287 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF----NPHPRTIIQSSSPIFTLSPP 75
             + +G FDG+H GH  ++++  ++     +  + F    NP    + +S   I +    
Sbjct: 16  AAITLGKFDGVHRGHQKLIKKVCQLKAKKGVRSVVFAFDMNPLYEKLGKSREGIMS---- 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + + L       L+   F+ +  + SAE FI+K+L+E +  + ++ GT F FG D+ G
Sbjct: 72  NEERRCLLDEKVDVLLECPFSEDVTSMSAEDFIRKILIEKIHARYIVIGTDFHFGHDKRG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L +  + YG+    I++    K +I SSS +R  L KG++     +LGY +T+   
Sbjct: 132 DAKMLAEYADVYGYELFVIEKEMYGKREI-SSSYVREELRKGNMEAVNDMLGYAYTVRGK 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V HG ++GR LGFPT N+  S D LL   GVY    R  D   Y+G+ N G  PT+    
Sbjct: 191 VEHGRQLGRKLGFPTLNVHPSRDKLLPPNGVYLDSVRI-DGIWYNGIGNVGFKPTVSDEN 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            +L+ES + D+S + YG+   +  + + RPE KF+ +E +K  + +D
Sbjct: 250 RMLIESNLLDYSGDAYGKEVEIQLYHFKRPEQKFESVEMMKAQIDQD 296


>gi|325677840|ref|ZP_08157482.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 8]
 gi|324110394|gb|EGC04568.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 8]
          Length = 308

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 153/303 (50%), Gaps = 10/303 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V A+G FDG+H GH L++  A+ +A    +   V +F  +  T       +  +    
Sbjct: 13  GTVCALGLFDGVHRGHRLVINTAVSLAKELGAQSAVFTFKTNTVTSKGHDGRLEMILSDE 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +    +G   L    F  E  + SAE F++ +LV  L  + V+ G  FRFGK   GD
Sbjct: 73  EKRRHFGDLGVELLYSPSFE-ELKDMSAEAFVRDILVGVLGCRAVVCGDDFRFGKGAEGD 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G  YG   +  D+L + K + VSS+ IR  +  G +  A  +LGY F+++ +V
Sbjct: 132 CSSLELYGRIYGIEVIVCDKL-SYKGEEVSSTMIRECIRTGKIEKANEMLGYIFSLKLEV 190

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG ++GRT  FPT N  +    I+ K GVYA R     +  + GV N G  PT+  +  
Sbjct: 191 EHGRELGRTWNFPTMNQTIPRGQIMPKFGVYATRVTVGGEEKF-GVTNIGVKPTLKAHDA 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            L E+FI DF  ++YGQ+  +    ++RPE  F  I++L+  + +D  K R+     Y +
Sbjct: 250 PLAETFILDFEGDLYGQKIEIMLDKFIRPEKGFDSIDELRAQIAKDTDKVRRF----YGV 305

Query: 316 SER 318
            ER
Sbjct: 306 DER 308


>gi|254497734|ref|ZP_05110507.1| riboflavin biosynthesis RibF [Legionella drancourtii LLAP12]
 gi|254353027|gb|EET11789.1| riboflavin biosynthesis RibF [Legionella drancourtii LLAP12]
          Length = 325

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 145/295 (49%), Gaps = 12/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS------PITVLSFNPHPRTIIQSSSPIFT 71
           KG V  IGNFDG+HLGH    +  IK+  N       P+ ++ F P PR   Q       
Sbjct: 15  KGVVATIGNFDGVHLGH----QNLIKVLRNKADALKLPLVLILFEPQPREYFQKDKAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           LS    +  +L +     +   KF    A  +A  F    L   L VK ++ G  FRFGK
Sbjct: 71  LSSLREKLAVLRECQIDYIYCIKFDDLVAQTTATDFAHHYLFSMLNVKHLVVGEDFRFGK 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R GD  +L+    +Y        +   +  +I SS+ IRTAL +G++  AA  LG  ++
Sbjct: 131 NREGDVNLLKSLRSEYACEVQVYSDFCISDERI-SSTKIRTALQEGNLKTAAKYLGRPYS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+HG+K GR  G PTAN+ L    +  +GV+ I+     Q    GVAN G+ PT V
Sbjct: 190 ICGRVMHGDKRGRQWGIPTANLGLHRLSVPLQGVFVIKALIASQQLVYGVANIGKRPT-V 248

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                +LE  +FDF Q IYG+   V F   LR E+KF  ++ L   + +D   A+
Sbjct: 249 DGSKNILEVHLFDFDQSIYGELVQVFFLHKLRDEVKFTAVDALIAQIYDDIAVAK 303


>gi|254785206|ref|YP_003072634.1| riboflavin biosynthesis protein RibF [Teredinibacter turnerae
           T7901]
 gi|237684120|gb|ACR11384.1| riboflavin biosynthesis protein RibF [Teredinibacter turnerae
           T7901]
          Length = 315

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 158/321 (49%), Gaps = 20/321 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           +H  H++     LPNH  G V  IG+FDG+H GH  ++ Q  +   A+  P  V+ F P 
Sbjct: 7   IHGLHSL-----LPNH-HGCVATIGSFDGVHRGHQEVIRQLREHASAHQVPALVMVFEPQ 60

Query: 59  PRTIIQSSSPIFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           P             +PP +     + + L   G   ++  +F  E    SA+ FI++VLV
Sbjct: 61  PSEFFSQEK-----APPRLMRLRDKTEALFAAGVDRVLCLRFNRELRGLSAQAFIEQVLV 115

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L ++ ++ G  FRFG DR GD  +L   GE++GF +V       +  Q +SS+ IR  
Sbjct: 116 ARLGIRHLVIGDDFRFGCDRQGDYSMLAAAGERFGF-SVCDTRTELDGGQRISSTRIRAL 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +     AA LLGY + I   VI+G+++GRTLGFPTAN+ L       +GVYA+     
Sbjct: 175 LEQDAFAEAARLLGYEYRIRGRVIYGKQLGRTLGFPTANVHLGRYRTAVQGVYAVAVDID 234

Query: 234 DQT-SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               +   VAN G  PT+      LLE  + +    +YG    V     LR E++F+ + 
Sbjct: 235 GGAQNVPAVANIGVRPTVSGGREPLLEVHLLEHGGNLYGHWINVRIKHKLRSEMRFESLA 294

Query: 293 KLKIYMGEDEKKARKILESSY 313
            L+  +  D + A++    ++
Sbjct: 295 ALQAQITLDVEIAKRWFNETH 315


>gi|323157919|gb|EFZ44022.1| riboflavin biosynthesis protein RibF [Escherichia coli EPECa14]
          Length = 295

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  +   + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLGVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|302346932|ref|YP_003815230.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           ATCC 25845]
 gi|302150673|gb|ADK96934.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           ATCC 25845]
          Length = 323

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 163/320 (50%), Gaps = 9/320 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
            + I I +   + L   V  IG FDG+H GH  ++ + I  A  S +   V++F+ HPR 
Sbjct: 1   MNTIYIKRDEAHELVEQVATIGFFDGVHRGHQFLISRVIDEAERSGMASAVITFDRHPRQ 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++Q+      LS    +  +L K          F    A  SA  F+Q+VL + L VK +
Sbjct: 61  VLQADYQPELLSTLDEKLLLLSKTHIDNSFVLHFDASLAALSAHDFMQEVLCKQLNVKKL 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           I G   RFG +R+       + G++ G   +  D    N  + VSSS IR  L  G++  
Sbjct: 121 IIGYDNRFGHNRSETFEDYVQYGKEMGIEVIRADAFLPNDEK-VSSSVIRNDLRAGNIEA 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS 239
           A  LLGY +TIES ++ G + GR +GFPTAN+ ++    +L   GVYA+  R +D   + 
Sbjct: 180 ANRLLGYPYTIESRIVSGYQNGRKMGFPTANLDVNGCQQLLPASGVYAVMVRLKDSVEWK 239

Query: 240 -GVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G+ N G  PT   NG    +E  +F+F+  +YGQ   VSF   +R E KF  +E L   
Sbjct: 240 RGMMNIGHRPTF--NGTTTSIEVNLFNFTGNLYGQELLVSFISKIRDEHKFDSLEALAQQ 297

Query: 298 MGEDEKKARKILESSYPLSE 317
           + +D+++  ++ + +Y + E
Sbjct: 298 LKQDKEQINRLFDETYHIQE 317


>gi|253998232|ref|YP_003050295.1| riboflavin biosynthesis protein RibF [Methylovorus sp. SIP3-4]
 gi|253984911|gb|ACT49768.1| riboflavin biosynthesis protein RibF [Methylovorus sp. SIP3-4]
          Length = 302

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 20/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF +   +   P       +AIGNFDG+HLGH  +L Q +++A    +   V++F PH
Sbjct: 1   MRVFRHFPASGQRPP----AALAIGNFDGVHLGHQALLRQLVQVAAARGLQPVVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR           L+  S++EK+    + G + +    F    A   A  F+Q +L   L
Sbjct: 57  PREFFTPLQAPARLT--SLREKLEHFIEAGVADVYVCHFNQRFAALEASAFMQDILRGQL 114

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  FRFG  R G  G+   R   +   +V   +L  ++   +SS+ +R AL  
Sbjct: 115 NAEAILVGDDFRFGARRQG--GLDDLRQAGFALESVPEIQLDGDR---ISSTRVRQALHD 169

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A+ LLG  ++I   V+HG K+GR LGFPTAN+ +  +     GVYA++       
Sbjct: 170 GDLPLASALLGRYYSISGKVVHGRKLGRQLGFPTANIHMRHERPALTGVYAVKL-----D 224

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN G  PT+     L LE  + D+S ++Y +   VSF   LR E+KF  ++ LK 
Sbjct: 225 GLPGVANLGVRPTIAGTPRLSLEVHLLDYSGDLYDRHVHVSFLKKLRDEMKFPGLDALKQ 284

Query: 297 YMGEDEKKARKILES 311
            +  D  +AR    S
Sbjct: 285 QIALDSGQARTFFAS 299


>gi|146310247|ref|YP_001175321.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter sp. 638]
 gi|145317123|gb|ABP59270.1| FMN adenylyltransferase [Enterobacter sp. 638]
          Length = 312

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 148/298 (49%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQGLRKEGQARGLPVVVMIFEPQPLELFAGDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ F+  +LV+ L V+ +  G  FRFG  R GD
Sbjct: 76  DKLRYLAECGVDYVLCVRFDQRFAALTAQAFVGDLLVKRLGVQFLAVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             + VSS+ +R AL    +  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGLEYGFDVTSTMTFCEGGVR-VSSTAVRLALADDQLDVAETLLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V     
Sbjct: 195 VHGDALGRTIGFPTANVPLRRQVSPVKGVYAVEVSGLCDTLLPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    S P
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTAREYFGLSNP 311


>gi|229180085|ref|ZP_04307429.1| FMN adenylyltransferase [Bacillus cereus 172560W]
 gi|229191978|ref|ZP_04318948.1| FMN adenylyltransferase [Bacillus cereus ATCC 10876]
 gi|228591529|gb|EEK49378.1| FMN adenylyltransferase [Bacillus cereus ATCC 10876]
 gi|228603294|gb|EEK60771.1| FMN adenylyltransferase [Bacillus cereus 172560W]
          Length = 335

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 172/311 (55%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA++      V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVEQIAKDKKTAQE-----Y 321

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 322 FVSEKN-ILAF 331


>gi|218898961|ref|YP_002447372.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9842]
 gi|218540891|gb|ACK93285.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9842]
 gi|326941575|gb|AEA17471.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 323

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA++      V++F+PHP  ++ +  + +  ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 196 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S 
Sbjct: 255 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQEYFASE 313


>gi|229152008|ref|ZP_04280203.1| FMN adenylyltransferase [Bacillus cereus m1550]
 gi|228631357|gb|EEK87991.1| FMN adenylyltransferase [Bacillus cereus m1550]
          Length = 335

 Score =  155 bits (392), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 171/311 (54%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRSGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVEQIAKDKKTAQE-----Y 321

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 322 FMSEKN-ILAF 331


>gi|157692350|ref|YP_001486812.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pumilus SAFR-032]
 gi|157681108|gb|ABV62252.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pumilus SAFR-032]
          Length = 321

 Score =  155 bits (392), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 171/312 (54%), Gaps = 15/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           +H+ H   +NQ   +     V+A+G FDG+HLGH  +++ A  IA      + V++F+PH
Sbjct: 4   IHISHPHTLNQKDQD---PSVMALGYFDGVHLGHQKVIDAAKSIARKEGLALAVMTFHPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++Q +  P   ++P   +   +E++G   +   +F+   A  S ++F+ + L E L 
Sbjct: 61  PSHVLQKAREPKDLITPLEDKIDFIEQLGADYVYIVQFSESFAALSPQEFVDQYLDE-LN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK  + G  F FG+  AG      + G+  G  T  I    +N+ + VSS+ IR+AL  G
Sbjct: 120 VKHAVAGFDFTFGRFGAGTMETFDEYGK--GRMTATIVPKLSNQDRKVSSTLIRSALKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            V   + LLG  + +   VIHG+K GRT+GFPTAN+ LS + I+   GVYA+R   + + 
Sbjct: 178 DVEYVSELLGKPYQLRGIVIHGDKRGRTIGFPTANVGLSAEYIIPPTGVYAVRAEVKGKM 237

Query: 237 SYSGVANFGRNPTMV---PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Y GV N G  PT     P+ P  +E  +F F++EIYG+   + +F  +R E KF  I++
Sbjct: 238 -YDGVCNVGYKPTFYEKRPDQP-AIEVNLFGFNEEIYGEPIKLQWFKRIRSEQKFNGIQE 295

Query: 294 LKIYMGEDEKKA 305
           L   +  D+++A
Sbjct: 296 LTAQISLDKEEA 307


>gi|323701870|ref|ZP_08113540.1| riboflavin biosynthesis protein RibF [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533174|gb|EGB23043.1| riboflavin biosynthesis protein RibF [Desulfotomaculum nigrificans
           DSM 574]
          Length = 313

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 6/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDGIHLGH  ++ +A+  A   N    VL+F+PHP  +++       L   + +E
Sbjct: 19  VALGNFDGIHLGHQRLIHEAMDNARRTNGMAAVLTFHPHPLQVLRPEMAPPMLLSRTAKE 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++ ++G   L+   F    A  S  +FI+++L   L VK ++ G  + FG    G    
Sbjct: 79  QMMAELGIDLLLMLPFNATFAQLSPIEFIEQILWNQLGVKGIVVGYNYTFGHKGRGTPDT 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L +  +KYG+    I  ++   ++IVSS+ IR  L +G V+ A   LGY    E  V+ G
Sbjct: 139 LWQYSDKYGYTLHVIPPVKVG-NEIVSSTLIRKKLAEGDVVAARKYLGYYPFTEGVVVVG 197

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL- 257
           ++ G TLGFPTAN+   P I++  +GVY++      +  Y GVAN G  PT   N     
Sbjct: 198 DRRGNTLGFPTANIDCPPGIVVPAKGVYSVYVELAGE-KYLGVANVGTKPTFNGNSQRTN 256

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E  + DF  +IYGQR  V +   LR E KF  I +L   +  D + AR
Sbjct: 257 IEVHLLDFCGDIYGQRIRVYYSRKLRDEKKFSSIMELVNQIRADVQSAR 305


>gi|323705396|ref|ZP_08116971.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535298|gb|EGB25074.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 310

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 163/291 (56%), Gaps = 10/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHP-RTIIQSS-SPIFTLSPPS 76
           V+A+GNFDGIHLGH  +++++++++  + +T  V +F  H  +TI +     + T +   
Sbjct: 17  VIALGNFDGIHLGHQELIKKSVELSKTNKMTSSVFTFKQHTTKTIYKYDYQKLLTTNRKK 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I+E    K      I Y F  + +  S + FI+ +L++ L +K  + G  +RFG +  GD
Sbjct: 77  IEE--FSKFNLDYAIIYDFNKDFSLLSPKTFIESILIDKLNMKIAVVGDNYRFGYNANGD 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+K  + Y +    ++ ++ N   I SSS IR+ + +G+V  A+  LG  F++E  V
Sbjct: 135 VSLLKKFSKIYNYEVYIVEPIKLNDIPI-SSSFIRSLIQEGNVEEASKCLGRYFSLEGYV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G KIGR LGFPTAN+++  D +L   GVY  + +  ++  + G+ N G NPT   N  
Sbjct: 194 ISGRKIGRNLGFPTANIKIDMDYILPLNGVYITKVKIGNR-HFLGITNVGINPTFNVNN- 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           L +E++I DF++ IYG    + F   +R EIKF   ++L   M  D   A+
Sbjct: 252 LSVETYIIDFNENIYGLFIEIEFIKRIRDEIKFNSKKELIEQMKNDYALAK 302


>gi|170768506|ref|ZP_02902959.1| riboflavin biosynthesis protein RibF [Escherichia albertii TW07627]
 gi|170122610|gb|EDS91541.1| riboflavin biosynthesis protein RibF [Escherichia albertii TW07627]
          Length = 295

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      + P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRSLPVMVMIFEPQPLELFATDKAPARLTRMREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   +++ A  LLG+ F I   V+H
Sbjct: 121 LLQKAGAEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLVLAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVVMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIVRDELTAREFFGLTKP 294


>gi|257469721|ref|ZP_05633813.1| FMN adenylyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317063953|ref|ZP_07928438.1| riboflavin kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313689629|gb|EFS26464.1| riboflavin kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 318

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 164/311 (52%), Gaps = 23/311 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIG FDGIH GH  ++E A++ A  NN    V +F  HP  II +S     ++    + 
Sbjct: 19  VAIGTFDGIHYGHQQLIEAAVEKAKENNGISVVFTFANHPMEIIDASKTPKCINTLEEKI 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ILE MG   LI   F  + A+ +A +F++ +L + ++ K +  G  F FG+        
Sbjct: 79  YILESMGIDYLILQPFNKKFADLTAVEFVE-ILKKDVDSKEIFVGFNFSFGEGGKAKTKD 137

Query: 140 LQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           L + GE  G        V ID+      QI+SS+ IR ++ +G        LG++F I  
Sbjct: 138 LIEIGESMGIKVNEIPAVTIDD------QIISSTLIRKSIQRGEFEKVNRYLGHQFLIIG 191

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGRNPTMVP 252
           +VIHG+KI R LGFPTAN++LS  +    G+Y   ++   +D   Y GV N G NPT+ P
Sbjct: 192 EVIHGKKIARQLGFPTANIKLSNRLYPPFGIYGAMVKIEGEDIERY-GVVNIGVNPTLKP 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR---KIL 309
            G   +E  I DF  +IYG++  V    ++R E KF  +++LK  +G D K  +   K+ 
Sbjct: 251 -GERSVEVHILDFDGDIYGKKIYVEIMKFMRDEKKFNSVDELKQVIGNDVKNWQNFVKVR 309

Query: 310 ESSYPLSERDR 320
           ++ Y  S +DR
Sbjct: 310 KNGY--SSKDR 318


>gi|41408991|ref|NP_961827.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397350|gb|AAS05210.1| RibF [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 327

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 21/318 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PHP  ++   S   
Sbjct: 13  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPHPMEVVYPGSHPA 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F FG
Sbjct: 73  QLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHVVEVVVGENFTFG 132

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K   G+   L++ GE++GF       + E  +N++   SS+ IR+ +  G V+ A   LG
Sbjct: 133 KKATGNVETLRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVDAGDVVAAMEALG 192

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ--------- 235
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 193 RPHRVEGVVVRGEGRGIQLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVIP 250

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D   ++YGQ   + F   +R + KF  ++ L
Sbjct: 251 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRGQHKFDSVDDL 309

Query: 295 KIYMGEDEKKARKILESS 312
            + MG+D ++AR++L + 
Sbjct: 310 VVAMGQDTERARQLLSAG 327


>gi|156935454|ref|YP_001439370.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156533708|gb|ABU78534.1| hypothetical protein ESA_03313 [Cronobacter sakazakii ATCC BAA-894]
          Length = 312

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 144/298 (48%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L            P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLAGLCAQGRERGLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ F+  +LVE L VK + TG  FRFG  R GD
Sbjct: 76  EKLRYLARCGVDYVLCIRFDRRFAALTAQNFVSDLLVERLGVKFLATGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL +  +  A +LLG  F I   V
Sbjct: 136 FLLLQKAGREYGFEVTSTQTFCEEGVRI-SSTAVRQALAQDDLSLAENLLGRPFAISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDALGRTIGFPTANLPLRRQVSPVKGVYAVEVLGISDKPLPGVANIGTRPT-VAGLRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D + ++YG+   V     +R E +F  +++LK  +  D   AR       P
Sbjct: 254 QLEVHLLDVAIDLYGRHIDVVLRKKIRNEQRFASLDELKAQIARDVITARDFFGLPTP 311


>gi|228922563|ref|ZP_04085863.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229047495|ref|ZP_04193085.1| FMN adenylyltransferase [Bacillus cereus AH676]
 gi|229111280|ref|ZP_04240833.1| FMN adenylyltransferase [Bacillus cereus Rock1-15]
 gi|229129085|ref|ZP_04258058.1| FMN adenylyltransferase [Bacillus cereus BDRD-Cer4]
 gi|229146380|ref|ZP_04274751.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST24]
 gi|228637013|gb|EEK93472.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST24]
 gi|228654322|gb|EEL10187.1| FMN adenylyltransferase [Bacillus cereus BDRD-Cer4]
 gi|228672056|gb|EEL27347.1| FMN adenylyltransferase [Bacillus cereus Rock1-15]
 gi|228723742|gb|EEL75097.1| FMN adenylyltransferase [Bacillus cereus AH676]
 gi|228836992|gb|EEM82333.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 335

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 171/311 (54%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVEQIAKDKKTAQE-----Y 321

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 322 FMSEKN-ILAF 331


>gi|309791318|ref|ZP_07685841.1| riboflavin biosynthesis protein RibF [Oscillochloris trichoides
           DG6]
 gi|308226628|gb|EFO80333.1| riboflavin biosynthesis protein RibF [Oscillochloris trichoides
           DG6]
          Length = 287

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 162/294 (55%), Gaps = 17/294 (5%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+HLGH  ++  A++ A +      VL++ PHP  I++  +P   LS  +++EKI
Sbjct: 1   MGKFDGLHLGHRQLISTAVRHARSLGFLSAVLTWEPHPNLILRPGTPPQLLS--NLEEKI 58

Query: 82  LEKMGF---SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            E +G      LI   FT  T   SA+ ++ ++    L ++ +  G  F  G+DR GD  
Sbjct: 59  -ELIGSFDPDLLIIAPFTEATKTTSADAYLAQICAA-LPLRELWVGAGFAMGRDREGDVP 116

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L   G++ GF      ++  +  ++VS+S +R  L  GHV  AA LLG  F +   V+ 
Sbjct: 117 NLMSIGQERGFAVGTASKVEID-GEVVSASRVRELLATGHVERAAMLLGRPFGLRGTVVP 175

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT--MVPNGP 255
           G++ GR +GFPTAN+++SP+ ++  +GVYA R    D  S   V N G  PT  M+    
Sbjct: 176 GDQRGRVIGFPTANLEISPNHVMPADGVYACRV-LLDGMSLPAVTNVGLRPTFGMIQR-- 232

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +E+ + D+S +IYG+   ++F   LR E KF  IE L   + +D ++AR++L
Sbjct: 233 -TVEAHLLDWSGDIYGRTLQITFLHRLRSEQKFAGIEALIAQIRQDAEQARRLL 285


>gi|228960025|ref|ZP_04121689.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799541|gb|EEM46494.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 335

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 171/311 (54%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRSEKKFNGIDELVEQIAKDKKTAQE-----Y 321

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 322 FMSEKN-ILAF 331


>gi|33866137|ref|NP_897696.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 8102]
 gi|33639112|emb|CAE08118.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 8102]
          Length = 309

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 157/291 (53%), Gaps = 5/291 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  ++ QAI  +   P TV+SF PHPR ++   + +  L  PS + +
Sbjct: 15  ALALGSFDGLHAGHRRVIGQAIAGSTAVP-TVVSFWPHPREVLFGEARL-RLDLPSEKLE 72

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L+ +G   L+   FT E A  SAE F+  VL++ L+ + ++ G  FRFG  R+GD  +L
Sbjct: 73  LLQPLGIEQLVLVPFTPELAQLSAEAFVNTVLLDTLQAQRIVVGANFRFGNKRSGDADLL 132

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++     G   V + E+  + +  +SSS IR AL  G +  A  LLG  +     V+ G 
Sbjct: 133 RQVAAARGVE-VLVTEIVEDGNGRMSSSRIRAALDIGDLDTAKSLLGRPYRFRGRVVRGR 191

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAI-RFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +GR LG+PTAN+Q+     L   GVYA   +        + V N G  PT+ P  P  +
Sbjct: 192 GLGRELGWPTANLQVDGRKFLPALGVYAAWAWVDGGDQPLAAVMNMGPQPTVDPTSPSAV 251

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D + E+ G++ TV     LR + +F  +E+L   +G D  +AR +L
Sbjct: 252 EVHLLDRTIELEGRQLTVEPVQRLRGQQRFSGLEELSAQIGRDADQARSLL 302


>gi|318042135|ref|ZP_07974091.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. CB0101]
          Length = 364

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 155/303 (51%), Gaps = 17/303 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +A+G+FDG+H GH  ++   ++ A  + +  TV+SF PHPR ++   +    L  P+ +
Sbjct: 46  AIALGSFDGLHQGHRRVIASVVERAAAAQLVPTVVSFWPHPREVLYGEA-RLRLDLPAEK 104

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD-- 136
             +LE +G   L+   FT E A  S EQF+++VLV+ L+ + V  G  FRFG  R+GD  
Sbjct: 105 IHLLEPLGIEQLVLVPFTPELAALSPEQFVEQVLVQQLKAQLVAVGENFRFGAGRSGDIH 164

Query: 137 --RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             R +  +RG +     + +  + ++ +  +SSS IR AL  G +  AAHLL   +    
Sbjct: 165 TLRALCAERGIE-----LLVQPILSDSAGRLSSSRIRQALEGGQLQEAAHLLDRPYRFGG 219

Query: 195 DVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPT 249
            V+ G  +GR LG+PTAN+Q+     L ++GVYA     Q +       + V N G  PT
Sbjct: 220 RVVRGRGLGRELGWPTANLQVDGRKFLPQQGVYAAWVWLQGERLPGERLAAVMNLGPQPT 279

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + P  P  +E  +     E+ G    V     LR + +F+ +E L   +  D   A  +L
Sbjct: 280 VDPTAPSAVEVHLLGRRLELEGAELLVEPVALLRQQQRFESLEALVAQIARDAATAEDLL 339

Query: 310 ESS 312
            S+
Sbjct: 340 GSA 342


>gi|309787321|ref|ZP_07681933.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1617]
 gi|308924899|gb|EFP70394.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1617]
          Length = 295

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++   F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G+  
Sbjct: 61  LRYLAECGVDYVLCVHFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGNFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           E  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 239 EVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|30021898|ref|NP_833529.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus ATCC 14579]
 gi|218231861|ref|YP_002368610.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus B4264]
 gi|296504304|ref|YP_003666004.1| bifunctional riboflavin kinase/FMN [Bacillus thuringiensis BMB171]
 gi|29897454|gb|AAP10730.1| Riboflavin kinase [Bacillus cereus ATCC 14579]
 gi|218159818|gb|ACK59810.1| riboflavin biosynthesis protein RibF [Bacillus cereus B4264]
 gi|296325356|gb|ADH08284.1| bifunctional riboflavin kinase/FMN [Bacillus thuringiensis BMB171]
          Length = 323

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 171/311 (54%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 196 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 255 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVEQIAKDKKTAQE-----Y 309

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 310 FMSEKN-ILAF 319


>gi|186681422|ref|YP_001864618.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nostoc
           punctiforme PCC 73102]
 gi|186463874|gb|ACC79675.1| riboflavin biosynthesis protein RibF [Nostoc punctiforme PCC 73102]
          Length = 349

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 46/340 (13%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN-----NSP---------------ITVLSFN 56
           L    VA+G FDG+HLGH  +++  +   +     +SP                TV++F+
Sbjct: 11  LTPTAVALGKFDGVHLGHQRVIQPVLHPCDRLSVASSPQSKENQQQTNQEYIYSTVVTFD 70

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+    +  P   L+P   + + L  +G   L+   F  E +  + E+F+QK+LV+ L
Sbjct: 71  PHPQEFF-TGQPRTLLTPLDEKVQQLRSLGVEQLVLLPFDKELSALTPEEFVQKILVQQL 129

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI-------------DELRNNKSQ 163
           + + +  G  F FG+ R+G    LQ    K+      +               +  N +Q
Sbjct: 130 QCQRISIGQDFCFGEKRSGTAKDLQLIAAKHNIPVTIVPLQTYTGDSPTQSSCVSTNPTQ 189

Query: 164 I--VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
              +S+S IR  L +G + NA  LLG  +T+   V+ G+++GRT+GFPTAN++L  +  L
Sbjct: 190 DARISTSLIRQTLEQGDIENANLLLGRPYTLFGVVVQGQQLGRTIGFPTANLELPKEKFL 249

Query: 222 -KEGVYAIRFRTQDQTSYS------GVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQR 273
            ++GVYA+R  T  +TS +      GV N G  PT+  NG     E  +FD+S ++YG++
Sbjct: 250 PRQGVYAVRVFTLSETSNAASSESLGVMNIGNRPTV--NGTYSSAEVHLFDWSGDLYGKK 307

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             +    +LRPE KF  +E LK  +  D   A+++L + +
Sbjct: 308 LAIELVKFLRPEQKFPSLEALKTQIQLDCVVAKEVLSAEW 347


>gi|19553182|ref|NP_601184.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|62390818|ref|YP_226220.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|145295882|ref|YP_001138703.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum R]
 gi|21324748|dbj|BAB99371.1| FAD synthase [Corynebacterium glutamicum ATCC 13032]
 gi|41326156|emb|CAF20319.1| PUTATIVE RIBOFLAVIN KINASE [Corynebacterium glutamicum ATCC 13032]
 gi|140845802|dbj|BAF54801.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 341

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 24/331 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
            S+P  L+G VV IG FDG+H GH  ++ +A K A     P  +++F+PHP  +      
Sbjct: 8   DSVPADLQGSVVTIGVFDGLHRGHQSLIGEAKKQAEELGVPCVMVTFDPHPIAVFLPGKE 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   +  +  + G  A +   FT E A  SAE++   ++V+ L  ++V+ G  F 
Sbjct: 68  PTRLAPLDYRLNLAAECGVDAALVIDFTKELAGLSAEEYFTTMIVDTLHARSVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG + AG    +++ G+K+G + V I  L ++  Q + S+ +R  L +G V  A   LG 
Sbjct: 128 FGVNGAGTESTMRELGQKFGVN-VTIAPLLHDDDQRICSTLVRDYLDQGEVERANWALGR 186

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRF-------------RTQ 233
           R+ +  +V+ G  + G+ LG+PTAN+ L   + L  +GVYA  F             R  
Sbjct: 187 RYAVRGEVVRGAGRGGKELGYPTANLYLPTSVALPADGVYAGWFTITDDREIDKEISRDI 246

Query: 234 DQTSYSGV-----ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           D T   GV      + G NPT   +    +E+FI D   ++YG    V F  +LR  +KF
Sbjct: 247 DGTMVPGVRYQTAISVGTNPTF-GDERRSVEAFILDQEADLYGHHVMVEFVGHLRDMVKF 305

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSERD 319
             +++L   M  D   AR IL     L + D
Sbjct: 306 NGVDELLDAMARDVTNARDILAKDKLLLDAD 336


>gi|227543268|ref|ZP_03973317.1| FAD synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227180955|gb|EEI61927.1| FAD synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 336

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 20/320 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
              P+ +   VV IG FDG+H GH  ++ +A++ A+    P  +++F+PHP  +I+  + 
Sbjct: 8   DEFPHDIGKTVVTIGVFDGVHRGHQKLICRAVEKAHELGLPCVMITFDPHPLAVIRPQAM 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     + +  +++G   ++  +F    ++   E F + VL + +    V+ G  F 
Sbjct: 68  PPILGTVEQRARRADELGVDHIVALQFDRALSSLEPEDFFEHVLQDKIHAAAVLVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AG    LQK GEKYG     ++ L+++  +I S+  IR AL  G +      LG 
Sbjct: 128 FGHKAAGTTETLQKLGEKYGVEVDVVELLKDHGERICSTM-IRKALLLGDIRKVNWALGR 186

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--------- 237
            FT+ S V+ G  + G  LG+PTANM   PD+ +  +GVYA  F   D+           
Sbjct: 187 PFTVRSLVVRGAGRGGAELGYPTANMYFGPDVAIPADGVYAGFFTVLDEAPSTAPIEGTM 246

Query: 238 -----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                Y    + G NPT   +    +ESF+ D   ++YG+ C V F D++R   KF  ++
Sbjct: 247 KLGVRYMTAVSVGSNPTF-GDERRSVESFVLDEHADLYGRYCRVEFIDFIRGMEKFSSVD 305

Query: 293 KLKIYMGEDEKKARKILESS 312
           +L  +M  D  KAR+IL  +
Sbjct: 306 ELLTHMDRDVAKAREILADA 325


>gi|229061412|ref|ZP_04198757.1| FMN adenylyltransferase [Bacillus cereus AH603]
 gi|228717835|gb|EEL69483.1| FMN adenylyltransferase [Bacillus cereus AH603]
          Length = 335

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 165/298 (55%), Gaps = 13/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  +
Sbjct: 33  VMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPHPSVVLGKKEAHVEYITPMRL 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+I+  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+++R  +  G +     +LG  +T+E  
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEYQEEK-VSSTSLRKLIRNGEMEQIPSILGRAYTVEGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVY +R +  D+  + GV N G  PT   N 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYTVRLKVHDEW-HDGVCNIGYKPTFKENE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S
Sbjct: 267 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVAQIAQDKKVAQEYFAS 324


>gi|262038061|ref|ZP_06011467.1| riboflavin biosynthesis protein RibF [Leptotrichia goodfellowii
           F0264]
 gi|261747928|gb|EEY35361.1| riboflavin biosynthesis protein RibF [Leptotrichia goodfellowii
           F0264]
          Length = 335

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 14/308 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            +V +GNFDG+H GH  +LE+A+K A        V +F  +P+   +  S I T   PS 
Sbjct: 35  NIVILGNFDGVHRGHAKLLERAVKKAREKGYKTIVYTFCEYPQ---KKESRITT---PSE 88

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +++       +    F  +  N+S E+FI+K+L++ L V+ +  G  F  GK ++G+ 
Sbjct: 89  KCQLINNFNIDYVYMDNFE-DVKNFSPEEFIEKILIQKLNVREIYCGFNFTLGKGKSGNV 147

Query: 138 GILQK-RGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            I++    EKY    V   +  + +++++I+SS+ IR  + K  +  A  LLG+ F I  
Sbjct: 148 RIMENILREKYNNSIVLNIQPSILDDENEIISSTRIRKYIQKSDLSKAKELLGHNFIIMG 207

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPN 253
           +V+HG+K+GRTLGFPTAN+     I  + GVY +    + D   Y G+ N G+NPT+  +
Sbjct: 208 EVVHGKKLGRTLGFPTANLTFENRIYPELGVYGVYVHIEGDSNIYHGIMNIGKNPTVKSD 267

Query: 254 GPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LL +E+ IFDF Q+IYG+   +   + +  E K   +E+L   + ++    RK ++  
Sbjct: 268 SLLLNVETNIFDFEQDIYGKIILIEVLEKVGKEKKLNSLEELIQKISDNVSNWRKRIDEK 327

Query: 313 YPLSERDR 320
           Y    ++R
Sbjct: 328 YHNKNKNR 335


>gi|54296957|ref|YP_123326.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Paris]
 gi|148360415|ref|YP_001251622.1| riboflavin biosynthesis protein RibF [Legionella pneumophila str.
           Corby]
 gi|53750742|emb|CAH12149.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Paris]
 gi|148282188|gb|ABQ56276.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Corby]
          Length = 328

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 152/301 (50%), Gaps = 11/301 (3%)

Query: 18  KGGVVAIGNFDGIHLGH-HLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH HLI     K    N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKALRAKADEMNLPLVILLFEPQPKEYFHREKAPARLS-- 72

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           +++EKI  L       +   KF    A  SA  F Q  L E L+++ ++ G  FRFGK R
Sbjct: 73  TLREKIDALNLCQVDYIYCIKFDARLAQTSALYFAQFYLFEALKIRYLLVGQDFRFGKSR 132

Query: 134 AGDRGILQKRGEKYGFH-TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            GD  +L+  G  Y    TV  D L  N+   +SS+ IR AL +G++  AA LLG  +++
Sbjct: 133 EGDVNLLKTLGANYSCEVTVQSDFLIENEK--ISSTRIREALQQGNLRFAAKLLGRPYSM 190

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT V 
Sbjct: 191 CGRVIKGDGRGRQWGIPTANLGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPT-VA 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
               +LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L  +
Sbjct: 249 GTKNILEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLRQN 308

Query: 313 Y 313
           +
Sbjct: 309 W 309


>gi|227488663|ref|ZP_03918979.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091376|gb|EEI26688.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 336

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 20/320 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
              P+ +   VV IG FDG+H GH  ++ +A++ A+    P  +++F+PHP  +I+  + 
Sbjct: 8   DEFPHDIGKTVVTIGVFDGVHRGHQKLICRAVEKAHELGLPCVMITFDPHPLAVIRPQAM 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     + +  +++G   ++  +F    ++   E F + VL + +    V+ G  F 
Sbjct: 68  PPILGTVEQRARRADELGVDHIVALQFDRALSSLEPEDFFEHVLQDKIHAAAVLVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AG    LQK GEKYG     ++ L+++  +I S+  IR AL  G +      LG 
Sbjct: 128 FGHKAAGTTETLQKLGEKYGVEVDVVELLKDHGERICSTM-IRKALLLGDIRKVNWALGR 186

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--------- 237
            FT+ S V+ G  + G  LG+PTANM   PD+ +  +GVYA  F   D+           
Sbjct: 187 PFTVRSLVVRGAGRGGAELGYPTANMYFGPDVAIPADGVYAGFFTVLDEAPSTAPIEGTM 246

Query: 238 -----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                Y    + G NPT   +    +ESF+ D   ++YG+ C V F D++R   KF  ++
Sbjct: 247 KPGVRYMTAVSVGSNPTF-GDERRSVESFVLDEHADLYGRYCRVEFIDFIRGMEKFSSVD 305

Query: 293 KLKIYMGEDEKKARKILESS 312
           +L  +M  D  KAR+IL  +
Sbjct: 306 ELLTHMDRDVAKAREILADA 325


>gi|54293911|ref|YP_126326.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Lens]
 gi|53753743|emb|CAH15201.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Lens]
          Length = 328

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 150/299 (50%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKTLRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A  SA  F Q  L E L+++ ++ G  FRFGK R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTSALYFAQFYLFEALKIRYLLVGQDFRFGKSREG 134

Query: 136 DRGILQKRGEKYGFH-TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           D  +L+  G  Y    TV  D L  N+   +SS+ IR AL +G++  AA LLG  +++  
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLIENEK--ISSTRIREALQQGNLRFAAKLLGRPYSMCG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT V   
Sbjct: 193 RVIKGDGRGRQWGIPTANIGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPT-VAGT 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             +LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++
Sbjct: 251 KNILEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLKQNW 309


>gi|218290092|ref|ZP_03494254.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239801|gb|EED06990.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 325

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 156/309 (50%), Gaps = 15/309 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIFT--LSPPSI 77
           V+AIG FDG+HLGH  IL  A  + A    + V+SF PHP T   + +P +   L+P   
Sbjct: 18  VLAIGKFDGVHLGHRAILNAARGLLAPEERLAVMSFEPHP-TYALTGNPEYARWLTPRRE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++  ++G  A    +F           F+   LV  L V+ V+ G  FRFG+   G  
Sbjct: 77  RVRLFTELGVDAFYVARFDRAFQQLEPAAFVDGYLVP-LRVRHVVVGPDFRFGRGGQGTV 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+  G + GF    +  +  +  +I SSS IR  L +G V  A  LLG  + I  +V+
Sbjct: 136 DVLRDLGRERGFDVQVVQPVEEHGHKI-SSSRIREHLREGRVEAAQALLGRPYVISGEVV 194

Query: 198 HGEKIGRTLGFPTANM-QLSPDILLKEGVYA--IRFRTQDQTSYS---GVANFGRNPTMV 251
           HG+K GRT+GFPTAN+  +   +L K GVYA  +     D    +   GV N G  PT V
Sbjct: 195 HGDKRGRTIGFPTANLGGIDAYVLPKTGVYAAFVEVEEADHACSAHAFGVLNAGYRPT-V 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI--L 309
                 LE  + DF  ++YG+   VSF   +R E+KF+ +E LK  +  D + AR +  L
Sbjct: 254 DGRAFQLEVHLLDFDGDLYGKTLRVSFLRRIRDEMKFESLEALKAQIARDCEVARALVGL 313

Query: 310 ESSYPLSER 318
            S  P   R
Sbjct: 314 SSGAPAERR 322


>gi|160892790|ref|ZP_02073580.1| hypothetical protein CLOL250_00321 [Clostridium sp. L2-50]
 gi|156865831|gb|EDO59262.1| hypothetical protein CLOL250_00321 [Clostridium sp. L2-50]
          Length = 309

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 12/299 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTI--IQSSSPIFT 71
           N  KG VVA+G FDG H GH L+L++ +++  +     V +F+    +I  +     I T
Sbjct: 13  NTEKGSVVALGKFDGFHQGHKLLLDEVLRLQKDGYTGVVFTFDIRKNSIFDVDKLQSIIT 72

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
                +   + E+MG   L+ Y F    A+   E F+  +LV+ L    V+ GT + FGK
Sbjct: 73  SEEKCM---LAEQMGIDVLVEYPFDDAFASMEPEAFVTDILVKRLHAGYVVVGTDYGFGK 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            + G+  +L+K   ++G+  + I E +     IVSS+ IR  +++G +  A   LG  + 
Sbjct: 130 KKRGNVELLRKMAGEHGYQVIVI-EKKKIHDVIVSSTYIRMLISEGKMEEAETFLGRPYF 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +   V+HG ++GRT+  PTAN  L P    I    GVYA R   +D     G+ N G NP
Sbjct: 189 LSGHVVHGRELGRTIQVPTAN--LLPKHGKIYPVTGVYASRIHLEDGRVCYGITNIGDNP 246

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T+  +  + +E+ IFDF ++IY Q+  V    ++R E KF  + +LK  M  D + A++
Sbjct: 247 TVNTDRRVTIETHIFDFDEDIYEQKLVVELLSFIRGEQKFSGVSELKAQMLADMEVAKQ 305


>gi|254776113|ref|ZP_05217629.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 324

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 21/318 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PHP  ++   S   
Sbjct: 10  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPHPMEVVYPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHVVEVVVGENFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K   G+   L++ GE++GF       + E  +N++   SS+ IR+ +  G V+ A   LG
Sbjct: 130 KKATGNVETLRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVDAGDVVAAMEALG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ--------- 235
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 190 RPHRVEGVVVRGEGRGIQLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVIP 247

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D   ++YGQ   + F   +R + KF  ++ L
Sbjct: 248 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRGQHKFDSVDDL 306

Query: 295 KIYMGEDEKKARKILESS 312
            + MG+D ++AR++L + 
Sbjct: 307 VVAMGQDTERARQLLSAG 324


>gi|71891904|ref|YP_277634.1| bifunctional: flavokinase; FAD synthetase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796010|gb|AAZ40761.1| bifunctional: flavokinase; FAD synthetase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 324

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG ++ IGNFDG H GH  +LE+  K  N    P+ V+ F P P+  +   S I  +   
Sbjct: 15  KGCILTIGNFDGFHRGHQALLEKLQKKRNILKLPVVVMIFEPQPKEYL---SNIIAIRLT 71

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            +++K+  L   G   ++   F  + A   A  FI+ +L+  L+V+ V  G  F+FG  R
Sbjct: 72  RLRDKVNYLCTAGVDVILCITFNKKFAAIEAYNFIKNILISKLDVRFVYIGDDFKFGAFR 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +L+K G+  GF  + I    +  ++ +SS+ IR AL +  +L+A  LLG+ + I 
Sbjct: 132 KGDFVLLKKIGKNAGFKVIRIATYFDENNRRISSTAIRVALVENRILDAELLLGHSYCIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+++GR +GFPTAN+ L    L   GVYA+           G+AN G  PT+   
Sbjct: 192 GRVVHGDELGRRIGFPTANVSLQGKRLPIHGVYAVEVYGISNYPLPGIANVGICPTVTGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               LE  + + S  +Y     V F   +R E  F  ++KL+  +  D  K R
Sbjct: 252 NQQKLEVHLLNVSTNLYTYHIKVVFLAKIRDEQYFSSVKKLQRQIKRDIIKVR 304


>gi|260596443|ref|YP_003209014.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cronobacter
           turicensis z3032]
 gi|260215620|emb|CBA27884.1| Riboflavin biosynthesis protein ribF [Cronobacter turicensis z3032]
          Length = 312

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 144/298 (48%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L            P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLSGLCAQGRERGLPVMVMIFEPQPLELFAADKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ F+  +LVE L VK + TG  FRFG  R GD
Sbjct: 76  EKLRYLARCGVDYVLCIRFDRRFAALTAQNFVSDLLVERLGVKFLATGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF             +I SS+ +R AL +  +  A +LLG  F I   V
Sbjct: 136 FLLLQKAGREYGFEVTSTQTFCEEGVRI-SSTAVRQALAQDDLSLAENLLGRPFAISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+ +GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V     
Sbjct: 195 VHGDALGRTIGFPTANLPLRRQVSPVKGVYAVEVLGISDKPLPGVANIGTRPT-VAGLRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D + ++YG+   V     +R E +F  +++LK  +  D   AR       P
Sbjct: 254 QLEVHLLDVAIDLYGRHIDVVLRKKIRNEQRFASLDELKAQISRDVITARDFFGLPTP 311


>gi|28210965|ref|NP_781909.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           tetani E88]
 gi|28203404|gb|AAO35846.1| riboflavin kinase [Clostridium tetani E88]
          Length = 318

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 163/287 (56%), Gaps = 12/287 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+HLGH  ++++AIK+A  NN    V +F  HP  +I  +     L   S + 
Sbjct: 20  VALGSFDGLHLGHMKLIDKAIKLAKENNGKSMVYTFKNHPLGVINENLAPKLLMDNSTKI 79

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L+  G   L    F       S E FI  ++ ++  +K ++ G  FRFG   +GD  +
Sbjct: 80  EVLKNKGVDILRFICFDKNFMEISPEDFILNIIKQY-NIKGIVVGFNFRFGHKNSGDVEL 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVIH 198
           L++  +KY F    +  +  N  ++VSSS IR  +++ G+V  A  +L + + +E +VI 
Sbjct: 139 LKELSKKYDFQLFIVGPVEYN-DEVVSSSRIRKTISEYGNVEEAKEMLPHPYFLEGNVIK 197

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVY--AIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G +IGR +GFPT N+  + D ++ K GVY   + + ++    Y G+ N G NPT V +  
Sbjct: 198 GRQIGRKMGFPTINLNYNKDFVIPKNGVYFTGVLYNSK---FYKGITNIGYNPT-VKSKK 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           L +E+ + +F++EIYG++  + F   LR E KFK +E+L + + +D+
Sbjct: 254 LNIETHVLNFNEEIYGEKIRLYFLSRLRNEKKFKSLEELSLTIKKDK 300


>gi|253682187|ref|ZP_04862984.1| riboflavin biosynthesis protein RibF [Clostridium botulinum D str.
           1873]
 gi|253561899|gb|EES91351.1| riboflavin biosynthesis protein RibF [Clostridium botulinum D str.
           1873]
          Length = 310

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 157/287 (54%), Gaps = 7/287 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++++ I++A  NN+   V +F  HP T+I +      +     + 
Sbjct: 18  IALGSFDGLHIGHMSLIDKTIELAKANNAKSMVFTFKNHPLTVINNDIAPKLIINNETKT 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LEK G   +    F       S E FI+ +L  +  VK +I G  +RFG    GD  +
Sbjct: 78  KLLEKAGIDIVNYANFDDIFMKISPEDFIENMLTHY-NVKGIIVGFNYRFGYKNLGDIDL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K   K GF    I+ ++ N +++VSS+ IR  +++G ++ A   L   F ++  V+HG
Sbjct: 137 LKKLSCKLGFDLKIINPVKIN-NEVVSSTRIRQLISEGDIVKANTFLNRNFVLKGKVMHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GR + FPT N+      +L + GVY       ++  Y G+ N G NPT V +  L +
Sbjct: 196 KQLGRKINFPTTNLDYDKKFVLPRGGVYYTSVNYNNK-KYKGITNIGYNPT-VKDEKLSI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           E+ I DF +EIY +   + F + +R E KF  IE+L   + +D+K A
Sbjct: 254 ETHILDFQKEIYDEILEIYFHERIRDEKKFDSIEELANQLTKDKKYA 300


>gi|282889771|ref|ZP_06298310.1| hypothetical protein pah_c004o144 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500345|gb|EFB42625.1| hypothetical protein pah_c004o144 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 307

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 6/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+HLGH  +L+   + A   N+   V +F  HP T++ S+     L     +
Sbjct: 18  VLTIGNFDGMHLGHQKVLQALKEFAKLQNAQTAVFTFVNHPSTVLNSAKSTCQLCTLDHK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE+     +I   FTLE A  +AE F++K+    +    +I G     GKDR GDR 
Sbjct: 78  LFLLEQAKIDWVILLPFTLEFAGQTAEIFLEKLQAS-IPFSHLILGHDAFLGKDRKGDRS 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +  +++ F   ++ E   +  +I SSS IR  +  G +  A+ LLG  ++    V  
Sbjct: 137 TLNQIAKEHAFELTYLPEYSIDTKKI-SSSAIRQLIADGKLSEASQLLGRSYSFYGMVKP 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G++ GR LGFPTAN  ++   L   GVYA++   Q    +  VAN G  PT+      +L
Sbjct: 196 GQRKGRHLGFPTANFDVTGMCLPPYGVYAVKLWHQG-ICFPAVANLGIAPTIREENNPVL 254

Query: 259 ESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D  + ++Y   C V F  ++RPE KF  IE LK  + +D  +AR+ L
Sbjct: 255 EVHLLDAQENDLYDSFCEVVFHSFIRPEQKFSSIEHLKAQISQDVLQARQCL 306


>gi|284006373|emb|CBA71609.1| riboflavin biosynthesis protein [Arsenophonus nasoniae]
          Length = 309

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFD +H GH  +L+   +       P  V+ F P P      ++    L+   
Sbjct: 16  GCVLTIGNFDAVHRGHQALLKHLKQQGQRLGLPTMVMIFEPQPLEFFLGANAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K   + G   L+  KF    A+ S + F+ ++LVE L VK +  G  FRFGKDR GD
Sbjct: 76  DKIKYFSEYGVDYLLCVKFNPPFASLSPQAFVSQLLVEKLGVKFLAIGDDFRFGKDRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  GE+YGF     +    +  Q VSS+ +R AL   ++  A +L+G+ + +   V
Sbjct: 136 FKYLRAAGEQYGFEVANTESF-CDAGQRVSSTAVRQALLSDNLTLAENLMGHPYRLSGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++G  +GFPTAN+  +  ++  +GVY +            VAN G  PT V  G  
Sbjct: 195 VHGSQLGSKIGFPTANIPFNCLVMPVKGVYVVEVYGLADHPLPAVANIGTRPT-VNGGDR 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +E  + D   +IYG+   V     LR E +F  I++L+  +GED   AR+  +SS
Sbjct: 254 QIEVHLIDRRMDIYGRHIDVVLRKKLRDEQRFASIDELRQQIGEDIMAARQFFQSS 309


>gi|282898077|ref|ZP_06306072.1| hypothetical protein CRD_02645 [Raphidiopsis brookii D9]
 gi|281197221|gb|EFA72122.1| hypothetical protein CRD_02645 [Raphidiopsis brookii D9]
          Length = 333

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 23/326 (7%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-----TVLSFNPHPR 60
           +I +  S    L    VA+G FDG+HLGH  ++E          I     TV++F+PHP 
Sbjct: 10  SIWVAASTDQILTPTAVALGKFDGVHLGHQRVIEPVRNSHTQDNIKSIYSTVVTFDPHPE 69

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S  P   L+P   + + L+ +G   L+   F  E +  S   F++K+LV+ L+ + 
Sbjct: 70  EFF-SGQPRTLLTPLVEKIECLQGLGIDQLVLLPFDRELSALSPRDFVEKILVQQLQCQK 128

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------------DELRNNKSQIVSSS 168
           +  G  F FG+ R G    LQ     Y      +            D   + +   +S+S
Sbjct: 129 ISVGEDFCFGQKRLGTARDLQILAGFYNIPVNIVPIQMDMINLPANDGALDGQDNRISTS 188

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYA 227
            IR +L+ G +  A  LLG  +T+   V+ G+K+GRT+GFPTAN+QLS D  L  +GVYA
Sbjct: 189 LIRESLSLGDIPRANRLLGRPYTLSGIVVTGKKLGRTIGFPTANLQLSQDKFLPLQGVYA 248

Query: 228 IRFRTQDQTSY-SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           +R  T        GV N G  PT+  NG  L +E  +FD+  ++YG++  V    +LRPE
Sbjct: 249 VRVLTDTSPQVILGVMNIGNRPTV--NGYSLSVEVHLFDWEGDLYGKQLVVELVKFLRPE 306

Query: 286 IKFKDIEKLKIYMGEDEKKARKILES 311
             F ++E LK  +  D   A+ +  +
Sbjct: 307 QNFPNLEALKRQIQTDCVSAKNLFAA 332


>gi|313901839|ref|ZP_07835260.1| riboflavin biosynthesis protein RibF [Thermaerobacter subterraneus
           DSM 13965]
 gi|313467882|gb|EFR63375.1| riboflavin biosynthesis protein RibF [Thermaerobacter subterraneus
           DSM 13965]
          Length = 334

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 153/313 (48%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNP 57
           M V H I       P       VAIG FDG+H GH  +L    A   A  +    L+F+P
Sbjct: 1   MEVIHGIAGWRDGQPT-----CVAIGTFDGVHRGHQALLRGAVAAARAQQAVAVALTFDP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        L     +  +   +G    +  +F    +  +AE F ++VL   L+
Sbjct: 56  HPLAVLAPDRLPPLLGTLDDRLALFASLGIDRTLVARFDHALSQTTAEDFAREVLAGKLQ 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V  G  FRFG+   G    L++ G ++GF T  +  +R   +Q+VSSS +R+ L  G
Sbjct: 116 ARAVFVGYNFRFGRGGQGTPADLERWGSQWGFWTHTVPPVRVG-AQLVSSSWVRSLLEMG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT 236
            V  AA  LG  +++   V+ GE  G  LGFPTAN++L+P + L   GVYA+  RT    
Sbjct: 175 QVEIAATALGRLYSVAGRVVRGEGRGAGLGFPTANLELAPGLALPAAGVYAVWVRTPGGL 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN GR PT    G L LE  + D ++++YGQ   V F   LR E +F   E+L  
Sbjct: 235 E-PGVANLGRRPTFG-GGALRLEVHLLDGARDLYGQVLRVGFARRLREERRFSGPEELAR 292

Query: 297 YMGEDEKKARKIL 309
            +  D   AR+ L
Sbjct: 293 QIARDVAAAREAL 305


>gi|218778406|ref|YP_002429724.1| riboflavin biosynthesis protein RibF [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759790|gb|ACL02256.1| riboflavin biosynthesis protein RibF [Desulfatibacillum
           alkenivorans AK-01]
          Length = 311

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 166/316 (52%), Gaps = 14/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  N+E   ++       V+ IGNFDG+H+GH  +  + I+ A++       ++F PH
Sbjct: 1   MQLIENLE---AIKQPFSKAVITIGNFDGVHIGHQALFSEVIQKADSIGGSSMAMTFEPH 57

Query: 59  PRTIIQSSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P   ++  +  P+ TL    ++  ++ + G  AL+   F    A+ S ++F++ +L++ L
Sbjct: 58  PARFLKKENFPPLITLYEQKVE--LISRTGLDALVVVPFNEAFASLSPQEFVEDILIKRL 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTAL 174
            VK +I G  + FGK R G+   LQ+  E   F  + +  +       + +SS+ IR  +
Sbjct: 116 GVKVLIVGPDYCFGKGREGNVEYLQQIAEPLDFELMVVPWIGQAGPDGERISSTRIRELV 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
             G +  A  LLG  + +   V+ G  + G+ LGFPTAN+ L+ ++  K GVYA+  +  
Sbjct: 176 QDGKIEEAKRLLGRDYQVRGMVVKGRNRGGKLLGFPTANIHLTDELCPKTGVYAVTMQV- 234

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D   Y  VAN G +PT   +    +E    DFS ++Y ++  V+F   LR EIKF +++ 
Sbjct: 235 DDVVYPAVANIGYSPTF-DDYIFTVEVHALDFSGDLYDKKIKVNFIARLRGEIKFPNLDA 293

Query: 294 LKIYMGEDEKKARKIL 309
           L   + ED K AR+I+
Sbjct: 294 LIEQIREDIKIAREII 309


>gi|87301113|ref|ZP_01083954.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 5701]
 gi|87284081|gb|EAQ76034.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 5701]
          Length = 367

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 15/305 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            VA+G+FDG+H GH  ++           I TV+SF PHPR ++    P   L  P  + 
Sbjct: 41  AVALGSFDGLHQGHRRVIAAIAAAPTPGLIPTVVSFWPHPRELLYGE-PRLRLDLPGEKL 99

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE  G   L+   FT   +  S E F+++VLV  L+ + V  G  FRFG DRAGD   
Sbjct: 100 ALLEPYGIRQLVLVPFTRALSLLSPEAFVEQVLVGELQAREVAVGENFRFGHDRAGDTAS 159

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G ++G   V +  +  + ++ +SSS IR AL  G +  A  LL   +     V+ G
Sbjct: 160 LREIGGRHGLR-VLVSSMLWDGAERISSSRIRRALAAGAIDEANRLLERPYRFSGRVVRG 218

Query: 200 EKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS-----------YSGVANFGRN 247
             +GR L +PTAN+Q+     L +EGVYA   R  +               + V N G  
Sbjct: 219 RGLGRQLSWPTANLQVDGRKFLPQEGVYAAWVRNLEPAEGGEALQPCGAPMAAVMNLGPQ 278

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+ P  P  +E  + D + E+ G+   V     LR + +F  +E+L   +G D   AR 
Sbjct: 279 PTVDPLAPSAVEVHLLDRALELVGRDLEVEPVQLLRRQQRFAGLEELSCQIGVDAALARS 338

Query: 308 ILESS 312
           +L  S
Sbjct: 339 LLNRS 343


>gi|167465517|ref|ZP_02330606.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 292

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 151/294 (51%), Gaps = 11/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDG+HLGH  ++ +A+ +A+    P  V++F PHP+ ++        ++P   +
Sbjct: 4   VMAIGQFDGVHLGHQEVIGRALSMASEKKIPSAVMTFYPHPKEVLGQQIYTDVITPLDHK 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG--D 136
              LEK+G        F       SAE F+++VL+  L V  ++ G  F FG    G  D
Sbjct: 64  MDCLEKLGIDYAYVLHFDESLMKLSAETFVEEVLIP-LNVADLVIGFDFTFGYKGLGTPD 122

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           + I    G +YG   V       N  +  SS+ IR+AL  G V+ A  LLG  ++I   V
Sbjct: 123 KLIEWSNG-RYGVEVV--SPFTQNGIK-TSSTEIRSALKDGDVMYANELLGRYYSIRGKV 178

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G++ GRT+GFPTANM +  P +    GVYA+    + +  Y GV + G  PT   +  
Sbjct: 179 IGGDRRGRTIGFPTANMDIKEPYVTPAIGVYAVYTWVKGK-RYKGVMSIGTKPTFSSDKR 237

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + LE  I DF + IYG+     F  +LRPE KF  +E L   + +D K A   L
Sbjct: 238 ITLEVHILDFHETIYGEDIQADFVCFLRPEKKFSSVEALVAQIQQDVKAAETKL 291


>gi|78484839|ref|YP_390764.1| riboflavin biosynthesis protein RibF [Thiomicrospira crunogena
           XCL-2]
 gi|78363125|gb|ABB41090.1| riboflavin kinase / FMN adenylyltransferase [Thiomicrospira
           crunogena XCL-2]
          Length = 321

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNP 57
           MH+   ++   ++   L+ G V+ IGNFDGIHLGH  IL+Q I +A +   P  V+ F P
Sbjct: 1   MHLIRGLQNLDTVKTELQAGCVLTIGNFDGIHLGHRAILDQVINLAKSKRLPSVVMIFEP 60

Query: 58  HP-RTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
            P       ++P+  ++   ++EK+   +      ++  +F    AN +  QF++ VL E
Sbjct: 61  LPIEYFAPQTAPVRLMN---LREKLSAFKATDIDYVLVCRFNEAFANLTPMQFVESVLKE 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ ++ G  F FGK R G+   L ++G   GF    +     + ++ VSS+ +R AL
Sbjct: 118 GLNVRHLVVGDDFCFGKQRQGNFDFLDEQGRCLGFEVTDVATFEVDGAR-VSSTRVRQAL 176

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
               +  A  LLG  F     VIHG+K+GR +GF T N+      +  +GVYA+      
Sbjct: 177 LMHDLAMAERLLGEPFHFHGRVIHGQKLGRKIGFRTLNLNPKRIQMPLDGVYAVNVSGLA 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              + GVAN G  PT+  + P  +E  +FD+ +++YG   +V    Y+R E+KF+++ +L
Sbjct: 237 AQDWPGVANIGIRPTVDGSRP-SIEVHLFDWDKDVYGAHISVRIEHYIRAEMKFENLTQL 295

Query: 295 KIYMGEDEKKARK 307
              +  D ++AR+
Sbjct: 296 TEQIERDAQEARQ 308


>gi|253988035|ref|YP_003039391.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253779485|emb|CAQ82646.1| riboflavin biosynthesis protein [Photorhabdus asymbiotica]
          Length = 314

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+           P+ V+ F P P       +    L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLKHLKHEGQRLGLPVMVMIFEPQPLEFFAKGNAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L + G   L+  KF    A  + E F+ ++LV+ L VK +  G  FRFGK R G
Sbjct: 75  RDKAKYLAQCGVDYLLCVKFDRSFAANTPEAFVSRLLVQKLGVKFLAVGDDFRFGKARCG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ GEKY F     +   +   +I SS+ IR AL    ++ A  LLG+ ++I   
Sbjct: 135 DFAFLQQAGEKYDFEVTNSESFCDGGLRI-SSTAIRQALQNDDLVLAETLLGHPYSICGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++G T+GFPTAN+ L   +   +GVY +           GVAN G  PT+  +G 
Sbjct: 194 VVHGKRLGSTIGFPTANLPLKRLVAPVQGVYVVEVYGLGDKPVPGVANIGTRPTVSGHGQ 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             LE  + D   ++YG+   V     LR E +F  ++ LK  +  D   AR+  +
Sbjct: 254 -QLEVHLIDTQLDLYGRYIDVVLRKKLRNEQRFASLDALKQQIANDLVAAREFFK 307


>gi|312795298|ref|YP_004028220.1| riboflavin kinase / FMN adenylyltransferase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167073|emb|CBW74076.1| Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC
           2.7.7.2) [Burkholderia rhizoxinica HKI 454]
          Length = 370

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 14/310 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTI 62
           + + + LPN       A  IGNFDG+H GH  +L Q  A   A   P+ V++F PHPR  
Sbjct: 17  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAQVRAAATARALPVCVMTFEPHPREF 76

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S   F++ ++V  L 
Sbjct: 77  FDPAG-----APPRITMLRDKLEALRRNGVDRIVVEHFNHTFASQSPAAFVEHIIVNGLH 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G  FR+G  RAGD   L+  G +YGF    +  + +     +SSS +R +L  G
Sbjct: 132 ARWVMIGDDFRYGAKRAGDFLSLKAAGAQYGFEVEQMPTVADPCGARISSSAVRASLVAG 191

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG    I   V+HG K+GR LGFPT N+ +S       G++ +R    +   
Sbjct: 192 DLAAARAALGRAIVISGHVVHGMKLGRDLGFPTLNLPISHKRPALAGIFIVRVHGIEAGP 251

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F + LR E KF D+E L   
Sbjct: 252 LPGVASLGWRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLEKLRDEQKFVDLEALGRA 311

Query: 298 MGEDEKKARK 307
           +  D   AR+
Sbjct: 312 IACDVAAARE 321


>gi|153855231|ref|ZP_01996397.1| hypothetical protein DORLON_02411 [Dorea longicatena DSM 13814]
 gi|149752230|gb|EDM62161.1| hypothetical protein DORLON_02411 [Dorea longicatena DSM 13814]
          Length = 307

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 154/285 (54%), Gaps = 7/285 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSI 77
             V  G FDG+H GH +++ +  ++     I   V SF+  P    +  +P   +     
Sbjct: 16  AAVTFGKFDGLHRGHQMLVTKVRELGKQENINSIVCSFDMRPLWKEKGIAPELLMVGEER 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           QE++ +++ +  LI   FT      SAE FIQ+++ +    K ++ GT F FG ++ GD 
Sbjct: 76  QERVKDEVDY--LIECPFTESFRQKSAEDFIQEIIHDLFRAKYIVVGTDFTFGCEKRGDV 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L +  ++Y +  + I++ R +  +I+SS+ ++  + +G V  A  LLGY F +E  V 
Sbjct: 134 HMLAEYADQYDYELIVIEKERYH-DRIISSTYVKEVVKEGDVGLAETLLGYPFEVEGTVE 192

Query: 198 HGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG ++GRTLGFPT N+      I+   GVY  +   + +T Y G+AN G  PT+     L
Sbjct: 193 HGRQLGRTLGFPTLNVAWPEGKIVPAHGVYFCKIDIEGKT-YPGIANVGIKPTVTEEKKL 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           L+E+F+F +S   YG++  ++   + RPE KF  I+ LK  + +D
Sbjct: 252 LIEAFLFGYSGNAYGEKVRINLKKFRRPEQKFDGIDALKRQIDKD 296


>gi|326797984|ref|YP_004315803.1| riboflavin biosynthesis protein RibF [Sphingobacterium sp. 21]
 gi|326548748|gb|ADZ77133.1| riboflavin biosynthesis protein RibF [Sphingobacterium sp. 21]
          Length = 323

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 169/331 (51%), Gaps = 31/331 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFN 56
           M ++ NIE    +P  L   VV IG FDG+H+GH  I+    E A KI  N    +L+F 
Sbjct: 1   MKIYRNIE--DFIP--LDNAVVTIGTFDGVHIGHQKIISSLREYAQKI--NGETVLLTFF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PHPR I+        L   +I+EK   L + G   LI   FT + +N SAE++I+++LV 
Sbjct: 55  PHPRMILHPDDDSLRLIN-TIEEKADRLAESGIDHLIITPFTRDFSNQSAEEYIREILVS 113

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            +  K +I G    FGKDR G    L K  E+Y +    I E   N    VSS+ IR AL
Sbjct: 114 KIGTKRIIIGYDHHFGKDRKGSLVDLLKYAEQYHYSVQEIPEQDINDVA-VSSTKIREAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIR--- 229
             G +  A   LGY F I   V+ G+++GRT+G+PTAN+++  S  ++   G+YA++   
Sbjct: 173 IIGEIATANKYLGYPFHITGKVVKGQQLGRTIGYPTANIEVPESYKLIPAYGIYAVQATL 232

Query: 230 -----------FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
                         +   +  G+   G  PT V      +E   FD ++++YG+   + F
Sbjct: 233 IEHAEMTTGEYIPAKKGPTLKGMGYIGTRPT-VRGVNRSIEINFFDLNEDLYGKTLQIQF 291

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             ++R + KF  IE +   + EDEKK +++L
Sbjct: 292 LHFVRHDHKFDSIEAMTAQLAEDEKKIKELL 322


>gi|291460006|ref|ZP_06599396.1| tRNA pseudouridine synthase B [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417347|gb|EFE91066.1| tRNA pseudouridine synthase B [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 536

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 20/298 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN----SPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           V++ G FDG HLGH LI ++ ++I+      S +   S +P  + + +    I      S
Sbjct: 233 VLSFGKFDGGHLGHQLIFDKILEISREKKLRSVLLTFSRSPEGKLLGEKRDRI------S 286

Query: 77  IQEKILEKM---GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            +E+ L ++   GF  +     T    + S E FI+ +L   + VK ++ G    FGK  
Sbjct: 287 TEEEHLSRLRSRGFDRVFELPLTEAFLDMSPEAFIEGILHRQMHVKELVVGEDASFGKGA 346

Query: 134 AGDRGILQKRGEKYGF--HTVFIDELRNNKS--QIVSSSNIRTALTKGHVLNAAHLLGYR 189
            GD  +L++  E +G+  H +   E  +     Q++SSS IR  L+ G V     LLG  
Sbjct: 347 RGDVALLRRYAEAFGYTVHALKKRETADEGGELQVISSSLIRKELSLGRVSRVRELLGRY 406

Query: 190 FTIESDVIHGEKIGRTL-GFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRN 247
           F++   V+HG++IG TL  FPTAN++ SP  L+   GVY +R    DQ+ Y+G+ N G N
Sbjct: 407 FSLSGTVVHGKRIGGTLLHFPTANLKPSPGKLIPAFGVYIVRV-LSDQSFYAGICNVGNN 465

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           PT+    P+ +ESF+  F  ++YG++  + F + LRPE++F  + +L   +  D+++A
Sbjct: 466 PTVSAENPVSIESFLLHFQGDLYGKKIRIDFIERLRPELRFSSLSELSEQLERDKEEA 523


>gi|288817664|ref|YP_003432011.1| riboflavin kinase [Hydrogenobacter thermophilus TK-6]
 gi|288787063|dbj|BAI68810.1| riboflavin kinase [Hydrogenobacter thermophilus TK-6]
 gi|308751262|gb|ADO44745.1| riboflavin biosynthesis protein RibF [Hydrogenobacter thermophilus
           TK-6]
          Length = 313

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 161/301 (53%), Gaps = 8/301 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + + N  +   V +GNFDGIHLGH  ++E+  + A   N    VLSF+PHP  ++     
Sbjct: 17  ECVENIQESTAVTVGNFDGIHLGHRFLIEKLKEEAKKRNLKTLVLSFHPHPLKVLSPKQS 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    +  +LE +     +  +F  + +   A+ FI+++L + L  K ++ G  +R
Sbjct: 77  PCELTNLEEKLNLLEALSIDYAVFIRFDEKFSLMKADDFIREILYKRLSAKFLLVGYDWR 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG  R G+  + ++ GEK GF  + ++  + N   IVSS+ IR  L  G +  A   LG 
Sbjct: 137 FGYRREGEIELAKELGEKLGFEVMSVEPFKIN-GHIVSSTLIRRLLHSGRLEEAQVYLGR 195

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + ++  V+ G+  G ++G PTAN++ + ++ LKEGVYA+      + S  GVAN+G  P
Sbjct: 196 HYWVKRKVVKGDGRGSSIGVPTANLEGTENLCLKEGVYAVLV----EESLLGVANYGYRP 251

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T       +LE  I DF++ +  ++  V F  +LR E KF  +E+LK  + +D +  R +
Sbjct: 252 TFGGRRK-VLEVHILDFNENLRSKKIKVEFVKFLREEKKFNSLEELKKQIKQDIELTRSL 310

Query: 309 L 309
           L
Sbjct: 311 L 311


>gi|168187904|ref|ZP_02622539.1| riboflavin biosynthesis protein RibF [Clostridium botulinum C str.
           Eklund]
 gi|169294245|gb|EDS76378.1| riboflavin biosynthesis protein RibF [Clostridium botulinum C str.
           Eklund]
          Length = 308

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 158/287 (55%), Gaps = 7/287 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++ + I++A  NN+   V +F  HP TII+       +    ++ 
Sbjct: 18  IALGSFDGLHVGHMSLINKTIELAKKNNAKSMVFTFKNHPLTIIKKDMAPKLIIDNEVKS 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++LEK G   +    F  E    S E FI+ +L      + ++ G  +RFG    GD  +
Sbjct: 78  ELLEKTGIDIVNYINFDDEFMKISPEDFIKNML-NCYNAQGIVVGFNYRFGYKNLGDIEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K  +K+GF    I+ ++ N   IVSSS IR  +++G+++ A   L   F ++  V+HG
Sbjct: 137 LKKLSDKFGFELNIIEPVKIN-GDIVSSSKIRQLVSEGNIIKANKFLNRPFMLQGTVMHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GR + FPT N++ +   +L K GVY    +   +  Y G+ N G NPT V +  L +
Sbjct: 196 KQLGRKMNFPTTNLKYNKKFVLPKGGVYYTCVKYNGE-KYKGITNIGYNPT-VSDKKLSI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           E+ I  F +EIY +   V F + +R E KF  I++L   + +D++ A
Sbjct: 254 ETHILGFQKEIYNENVKVYFCERIRDEKKFNSIKELANQLTKDKEFA 300


>gi|296101199|ref|YP_003611345.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295055658|gb|ADF60396.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 291

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 4/289 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+   K   A   P+ V+ F P P  +         L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLELFAGDKSPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ F+  +LV+ L V+ +  G  FRFG  R GD  
Sbjct: 61  LRYLAQSGVDYVLCVRFDRRFAALTAQNFVSDLLVKRLGVQFLAVGDDFRFGAGRQGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             + VSS+ +R AL    +  A +LLG+ FTI   V+H
Sbjct: 121 LLQKAGLEYGFDVTSAMTFCEGGVR-VSSTAVRQALANDELETAENLLGHPFTISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+ +GRT+GFPTAN+ L   +   +GVYA+      +  + GVAN G  PT V      L
Sbjct: 180 GDALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPFYGVANIGTRPT-VAGVRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+
Sbjct: 239 EVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARE 287


>gi|229098278|ref|ZP_04229225.1| FMN adenylyltransferase [Bacillus cereus Rock3-29]
 gi|228685176|gb|EEL39107.1| FMN adenylyltransferase [Bacillus cereus Rock3-29]
          Length = 335

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 163/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F+PHP  I+ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFHPHPSVILGKKEAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   N 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKENE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S 
Sbjct: 267 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQEYFASE 325


>gi|145220361|ref|YP_001131070.1| FMN adenylyltransferase / riboflavin kinase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206525|gb|ABP37568.1| FMN adenylyltransferase / riboflavin kinase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 308

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 155/289 (53%), Gaps = 10/289 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS--SSPIFTLSPPSI 77
           V +G+FDG+H GH  I+ + + IA    +   V++F PHPR +++   S P+  L+    
Sbjct: 19  VTVGSFDGVHRGHRKIISRMVSIARQRGLRSVVVTFEPHPRRVLKGGVSGPLGLLTTLDE 78

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L+      L   +FT E A  S++ FI+ +LV  +  + V+ G    FG++R+G  
Sbjct: 79  KVELLQAELVDMLCVVRFTPEFAVRSSDNFIRSLLVGEIGAECVVVGYDHGFGRNRSGGG 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++ G + GF  V +DE+R       SS+ IR+ L +G +  A   LG  + I   V+
Sbjct: 139 DELRRLGNELGFDVVEVDEVRIEHEHF-SSTRIRSLLAEGRMEEANSFLGAPYMISGTVV 197

Query: 198 HGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            GE  GRT+GFPTAN+ L PD   +L K GVYA      D  +Y  + N G  PT+   G
Sbjct: 198 EGEGNGRTIGFPTANI-LPPDPHKLLPKAGVYAAT-TVIDGNAYRAIMNVGVRPTVSSLG 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              +E+ I  +S  +YG+    S   +LR E KF  ++ L+  + +D+K
Sbjct: 256 VTTVEAHILGWSGSLYGRELRFSLLRFLRDEKKFDSLDALREQIEKDKK 304


>gi|154489994|ref|ZP_02030255.1| hypothetical protein PARMER_00223 [Parabacteroides merdae ATCC
           43184]
 gi|154089436|gb|EDN88480.1| hypothetical protein PARMER_00223 [Parabacteroides merdae ATCC
           43184]
          Length = 308

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 150/293 (51%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++ +  ++A  +  P  V++F  HPR ++ +      L+    +
Sbjct: 16  VATIGFFDGVHLGHRFLIHELKQVAEAAGLPSAVITFPEHPRAVLHADYQPKLLNSFEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K L   G    I   FTLE +  +A++FI  VL + L V T++ G   RFG +R     
Sbjct: 76  LKHLASTGIDYCIVLDFTLELSRLTAKEFITTVLADRLHVDTLLIGYDHRFGHNREDGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                GE  G   +   +    ++  VSSS IR  L +  V  AAHLL Y + +   ++ 
Sbjct: 136 QYVTYGETCGIRVIKASQYSEGEAA-VSSSEIRKLLAECRVEEAAHLLTYPYGLRGSIVS 194

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GR LGFPTAN+Q+     I+   GVYA+R     Q  Y G+   G  PT+     +
Sbjct: 195 GYKVGRKLGFPTANIQVDEPFKIIPGIGVYAVRVYLNGQ-RYKGMLYIGNRPTLDNGDNI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            LE  I +FS +IY    TV+F  ++R +IKF  +++L   + +D +   +IL
Sbjct: 254 TLEVNILNFSGDIYNNEITVTFIQHVRGDIKFDTLDQLIDQLKKDRETVDRIL 306


>gi|296106519|ref|YP_003618219.1| riboflavin kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648420|gb|ADG24267.1| riboflavin kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|307609729|emb|CBW99240.1| riboflavin biosynthesis protein RibF [Legionella pneumophila 130b]
          Length = 328

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 151/305 (49%), Gaps = 7/305 (2%)

Query: 18  KGGVVAIGNFDGIHLGH-HLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH HLI     K    N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKALRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A   A  F Q  L E L+++ ++ G  FRFGK+R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTPALYFAQFYLFEALKIRYLLVGQDFRFGKNREG 134

Query: 136 DRGILQKRGEKYGFH-TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           D  +L+  G  Y    TV  D L  N+   +SS+ IR AL +G++  AA LLG  +++  
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLIENEK--ISSTRIREALQQGNLRFAAKLLGRPYSMCG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT V   
Sbjct: 193 RVIKGDGRGRQWGIPTANLGIHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPT-VAGT 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             +LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++ 
Sbjct: 251 KNILEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKTYLKQNWL 310

Query: 315 LSERD 319
            S  D
Sbjct: 311 DSAID 315


>gi|289705308|ref|ZP_06501706.1| riboflavin biosynthesis protein RibF [Micrococcus luteus SK58]
 gi|289557971|gb|EFD51264.1| riboflavin biosynthesis protein RibF [Micrococcus luteus SK58]
          Length = 325

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 17/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+++++    +P  L   VV +GNFDG+H GH  +L + +++A   ++    ++F PH
Sbjct: 1   MRVWNSLD---EVPTDLPRTVVTLGNFDGVHRGHREVLRRVVELARARDALAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    +P   +  P  +  +L++ G  A++  ++TLE A+ S E+F++ +LV  L  
Sbjct: 58  PRAVHHPEAPHVDIISPEQRVVLLDEAGLDAVLLQRYTLEFADQSPEEFVRGMLVHGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS----QIVSSSNIRTAL 174
             V+ G   RFG+   GD   + + G +YGF    ++E          +  SS+ +R AL
Sbjct: 118 AVVVVGHDVRFGRGNTGDVAEMVRLGARYGFEVEAVEEFPAEHGAEPERRCSSTWVREAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ 233
             G V  AA +LG    +  +V+HG   GR LGFPTAN++     ++  +GVYA      
Sbjct: 178 AAGDVAQAAAVLGRHHVLAGEVVHGFARGRELGFPTANLETDVQGMIPADGVYAGWVHDA 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIK 287
               +    + G NPT   +   ++E+ + D   E      +YGQ   V F   LR  + 
Sbjct: 238 HGGVWPAAISIGSNPTF-EDVSRVVEAHVIDRHDERVEDFDLYGQHIEVEFVARLRGMVA 296

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           ++ +EKL   + +D  +AR IL ++
Sbjct: 297 YEGVEKLVAQITQDVDEARAILATT 321


>gi|33861829|ref|NP_893390.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33640197|emb|CAE19732.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 307

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 159/291 (54%), Gaps = 7/291 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  ++E  +K  + +P T+ SF PHPR ++   + +  L  P  +  I
Sbjct: 16  IAIGSFDGLHAGHRKLIESVVKENDYTP-TIASFWPHPREVLYKETRL-RLDLPEEKLPI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F    +  SAE+FI+ +L+  L+ K++  G  FRFG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDKNLSKLSAEKFIKNILINQLQAKSISVGANFRFGFKRSGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              +        I  L +   +I SSS IR  L K  + NA  +L   ++ +  V+ G+ 
Sbjct: 134 LATKDLDIKLKIISILEDKGGRI-SSSRIRDLLQKSDLKNAFKILNRPYSFKGKVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGPLLL 258
           IG++LGFPTAN+++     L  EGVYA  + T + +S   + V N G  PT+ P  P  +
Sbjct: 193 IGKSLGFPTANLEIDGRKFLPGEGVYA-AWSTINNSSNKIASVMNLGSQPTIDPLLPSAV 251

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + +    +YG   +V   + LR +IKF++I++L   + +D + A KIL
Sbjct: 252 EVHLINKDINLYGLNLSVEPIEKLRSQIKFQNIDELSNQITKDRENALKIL 302


>gi|167756863|ref|ZP_02428990.1| hypothetical protein CLORAM_02412 [Clostridium ramosum DSM 1402]
 gi|167703038|gb|EDS17617.1| hypothetical protein CLORAM_02412 [Clostridium ramosum DSM 1402]
          Length = 304

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 11/292 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+   VA+G FDG+HLGH  ++++ +K++   N    +L+F+ HP++ +  SS  + +S 
Sbjct: 14  LEPSCVALGFFDGMHLGHQKLIDEVLKVSKIKNLKKGLLTFDVHPKSYLLDSSFKYLMS- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK+ F  L   +F  + A+    QFI + +++  ++K V+ G  F FG  
Sbjct: 73  --LEDKIEFLEKLNFDYLFVLRFNHQLASKEPRQFIDEFIIKP-KIKHVVCGFDFHFGNH 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            +GD   L K      +    ID+L   + +I SSS +R  L+ G V  A+ LLG ++ +
Sbjct: 130 GSGDSVYL-KNNRNNDYEISIIDKLEYEQHKI-SSSYLRQVLSNGQVELASQLLGRQYQV 187

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V+HG + GR +GFPT N+     +L K GVY  +    D   Y G+AN G NPT   
Sbjct: 188 TGKVVHGRENGRKIGFPTINVAAIDYVLPKNGVYGAKVII-DGKEYIGMANLGYNPTFTA 246

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                LE  IFDF Q +YG++  V F  ++R E KF  I  L   + +D+++
Sbjct: 247 LKQASLEVNIFDFDQNVYGKQVNVMFIKHIRSEKKFPSINDLIEQLNKDKQQ 298


>gi|308389937|gb|ADO32257.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis alpha710]
          Length = 318

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 21/305 (6%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+     +   +
Sbjct: 23  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAALAGKT 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT--SYSGVA 242
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +     D T  +  GVA
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVE---ADGTFGTRRGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKARK 307
           + A++
Sbjct: 313 EAAKR 317


>gi|237734573|ref|ZP_04565054.1| riboflavin biosynthesis protein ribC [Mollicutes bacterium D7]
 gi|229382393|gb|EEO32484.1| riboflavin biosynthesis protein ribC [Coprobacillus sp. D7]
          Length = 306

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 11/292 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+   VA+G FDG+HLGH  ++++ +K++   N    +L+F+ HP++ +  SS  + +S 
Sbjct: 16  LEPSCVALGFFDGMHLGHQKLIDEVLKVSKIKNLKKGLLTFDVHPKSYLLDSSFKYLMS- 74

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK+ F  L   +F  + A+    QFI + +++  ++K V+ G  F FG  
Sbjct: 75  --LEDKIEFLEKLNFDYLFVLRFNHQLASKEPRQFIDEFIIKP-KIKHVVCGFDFHFGNH 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            +GD   L K      +    ID+L   + +I SSS +R  L+ G V  A+ LLG ++ +
Sbjct: 132 GSGDSVYL-KNNRNNDYEISIIDKLEYEQHKI-SSSYLRQVLSNGQVELASQLLGRQYQV 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V+HG + GR +GFPT N+     +L K GVY  +    D   Y G+AN G NPT   
Sbjct: 190 TGKVVHGRENGRKIGFPTINVAAIDYVLPKNGVYGAKVII-DGKEYIGMANLGYNPTFTA 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                LE  IFDF Q +YG++  V F  ++R E KF  I  L   + +D+++
Sbjct: 249 LKQASLEVNIFDFDQNVYGKQVNVMFIKHIRSEKKFPSINDLIEQLNKDKQQ 300


>gi|265754568|ref|ZP_06089620.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_33FAA]
 gi|263234682|gb|EEZ20250.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_33FAA]
          Length = 306

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 164/304 (53%), Gaps = 11/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  HPR +IQ++ 
Sbjct: 9   HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMHPRQVIQTTY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P  + ++LE       +   FT E +  SA +F+Q +L     + T++ G   
Sbjct: 65  HPQLLSSPKEKLELLETTQVDYCLLLPFTQELSMLSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+       + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSESFEDYCRYGEELNIYIVRARAYTDGEDKI-SSSVIRQLLKEGKVSQAAQFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  ++G+ N G
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWAGMLNIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E  I +FS++IY +   + F  +LRPE K+  I++L   M +D ++ 
Sbjct: 242 HRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKHLRPEEKYGTIDELIAQMHKDREET 301

Query: 306 RKIL 309
            KIL
Sbjct: 302 AKIL 305


>gi|239814276|ref|YP_002943186.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Variovorax
           paradoxus S110]
 gi|239800853|gb|ACS17920.1| riboflavin biosynthesis protein RibF [Variovorax paradoxus S110]
          Length = 345

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 159/334 (47%), Gaps = 38/334 (11%)

Query: 21  VVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            + IGNFDG+H GH   L L Q        P  VL+F PHPR    + +    L+P  I 
Sbjct: 17  ALTIGNFDGVHRGHQAMLALLQTEARHRGLPSCVLTFEPHPRDYFAAVTKKPDLAPARIG 76

Query: 78  --QEKILE--KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+ E    G +  +   F    A+ S E FIQ VL++ L  + V+ G  FRFG  R
Sbjct: 77  TLRDKLTELAACGVAQTVVLPFDGRLASQSPEAFIQNVLIDGLGARYVLVGDDFRFGARR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+ +GF     D  R N  ++    VSSS +R AL +G + +A HLLG  
Sbjct: 137 AGDYAMLDAAGDAHGF-----DVARMNSYEVHGLRVSSSAVREALAEGRMADAQHLLGRP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +TI   V+HG K+GR L         GF T N++         G++A+           G
Sbjct: 192 YTISGHVVHGRKLGRALGASAPGKDDGFRTLNLRFKHWKPAASGIFAVLVHGLADQPLPG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++  N    G +LLE+   ++     ++  YG+   V     L  E+++  +
Sbjct: 252 VANLGVRPSLDANDVNAGRVLLETHCLEWPSHLGAEGAYGKIVRVELLHKLHDELRYTSL 311

Query: 292 EKLKIYMGEDEKKARKILESSYPLSE----RDRI 321
           E L   + +D + AR    S++  +     RDRI
Sbjct: 312 EALTAGIAKDGRDARAFFASTHAETHRQTTRDRI 345


>gi|319900842|ref|YP_004160570.1| riboflavin kinase; FMN adenylyltransferase [Bacteroides helcogenes
           P 36-108]
 gi|319415873|gb|ADV42984.1| riboflavin kinase; FMN adenylyltransferase [Bacteroides helcogenes
           P 36-108]
          Length = 320

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 9/303 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           L+  +  IG FDG+H GH  ++EQ  ++A    +   V++F  HPR ++ S      L+ 
Sbjct: 12  LRPSIATIGFFDGVHRGHRYLIEQVCEVAAMRGLASAVITFPIHPRQVMCSDYHPALLTT 71

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L + G    +   FT E A  SA QF+  VL E   ++ ++ G   RFG +R+
Sbjct: 72  CDEKISLLAETGIDYCMMLDFTPEVARLSARQFM-AVLKERYLIEVLVIGYDHRFGHNRS 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQI---VSSSNIRTALTKGHVLNAAHLLGYRFT 191
                  + G++ G   +       NK +    VSSS IR  L KG+V  AA  LGY F 
Sbjct: 131 EGFDDYVRYGKELGIEVLLAHAYYYNKEKTGSTVSSSLIRHLLLKGNVSAAAEYLGYGFF 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQL-SPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +   V+ G ++GR +GFPTAN+++ SPD I+  +GVYA+ + + D   Y G+ + G  PT
Sbjct: 191 LGGTVVGGYQVGRKIGFPTANLRVDSPDKIIPSDGVYAV-YVSLDGMRYGGMLSIGYRPT 249

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +       +E  IF F  +IY +   VSF  Y+RPE KF  +E+L   +  DE++   +L
Sbjct: 250 LANGTDRSIEVNIFHFDADIYDRPMQVSFVRYMRPEQKFNTVEELIARIRRDEEEINSVL 309

Query: 310 ESS 312
             S
Sbjct: 310 SMS 312


>gi|254821339|ref|ZP_05226340.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium intracellulare ATCC 13950]
          Length = 325

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 21/320 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSS 67
              +P      V+ IG FDG+H GH  ++  A+K   A + P  +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARSVPTVLMTFDPHPMEVVYPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHVVEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK   G+   L++ G+++GF       + E  +N++   SS+ IR+ +  G V+ A  
Sbjct: 127 TFGKKATGNVETLRRAGDRFGFAVESMSLLSEHHSNETVTFSSTYIRSCVDAGDVVAATE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ------ 235
            LG    +E  V+ G   G  LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 187 ALGRPHRVEGVVVRGHGRGAELGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGT 244

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D   ++YGQ   + F   +R + KF  +
Sbjct: 245 VIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTDADLYGQHVALDFVGRIRGQHKFDSV 303

Query: 292 EKLKIYMGEDEKKARKILES 311
           E+L + MGED ++AR IL +
Sbjct: 304 EELIVAMGEDTERARTILST 323


>gi|196247589|ref|ZP_03146291.1| riboflavin biosynthesis protein RibF [Geobacillus sp. G11MC16]
 gi|196212373|gb|EDY07130.1| riboflavin biosynthesis protein RibF [Geobacillus sp. G11MC16]
          Length = 328

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 18/314 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H+ E  Q+LP      V+A+G FDGIHLGH  ++  A++IA        V++F+PHP  +
Sbjct: 12  HHFE-RQALPP----TVMALGYFDGIHLGHQKVIATAVEIAKQRGYESAVMTFHPHPSVV 66

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +     +  ++P   +E+++  +G + L   +FT   A    EQF+ + L E+  VK ++
Sbjct: 67  LGKQPELRLITPLGKKEQLIAALGVNRLYIVEFTPAFAGLLPEQFVDQYLDEF-HVKHIV 125

Query: 123 TGTKFRFGKDRAG--DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G  F +G+   G  +   L  RG    F    I ++  +  + VSS+ +R  + +G V 
Sbjct: 126 AGFDFTYGRFGKGTMETMPLHARGR---FEQTIIPKMTVDGEK-VSSTRVRKLIEEGAVE 181

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS 239
               LLG  + IE  V+ GE+ GRT+GFPTAN+ L+ D LL   GVYA++     Q  Y 
Sbjct: 182 QLPRLLGRFYDIEGTVVTGERRGRTIGFPTANIALNGDYLLPAIGVYAVKATIGGQV-YE 240

Query: 240 GVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           GVAN G  PT      G   +E  +F+F+++IYG+  T+ +   LR E KF  + +L   
Sbjct: 241 GVANIGYKPTFHETREGLPSIEVHLFEFARDIYGETVTIEWHRRLRGEQKFASVAELTAQ 300

Query: 298 MGEDEKKARKILES 311
           +  D+++A+K   S
Sbjct: 301 IARDKEEAKKYFHS 314


>gi|149179494|ref|ZP_01858042.1| probable riboflavin kinase (FAD synthetase) [Planctomyces maris DSM
           8797]
 gi|148841662|gb|EDL56077.1| probable riboflavin kinase (FAD synthetase) [Planctomyces maris DSM
           8797]
          Length = 295

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 149/290 (51%), Gaps = 5/290 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V+IGNFDG+H GH L++   ++ A     P  V +F+PHP  +++       L     +
Sbjct: 1   MVSIGNFDGVHRGHQLMILTLVQHARTQKIPAIVFTFDPHPIHLLRPEHAPPELMTIEQR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L+ +G   +I Y       N +AE+F Q+VL + L+ K ++ G  F FGK+RAGD  
Sbjct: 61  AEVLQGLGVDCVIAYPTDRALLNLTAEEFFQQVLCDQLQAKGMVEGPNFYFGKNRAGDVA 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L    E+ G     + E     S+++SSS +R ++  G +  A  +LG  + I   V H
Sbjct: 121 LLGHLCEQAGMFFKVV-EPTVCGSRMISSSEVRKSIQAGEIGEATRMLGRLYQISGTVGH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G + GR LGFPTAN+     ++  +GVY        +  Y    + G NPT   +    +
Sbjct: 180 GAERGRMLGFPTANLTDIKTLIPADGVYCGVGEIAGR-QYPAAIHIGGNPTFQSD-ETKV 237

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           E  +  FS +IYGQ+  V F D LR    F D E LK  +  D + A+K+
Sbjct: 238 EVHLIGFSGDIYGQKLQVQFLDQLRGTQTFADAESLKTQLLIDVESAKKL 287


>gi|268592114|ref|ZP_06126335.1| riboflavin biosynthesis protein RibF [Providencia rettgeri DSM
           1131]
 gi|291312510|gb|EFE52963.1| riboflavin biosynthesis protein RibF [Providencia rettgeri DSM
           1131]
          Length = 312

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           G V+ IGNFDG+H GH ++L Q +K+       P  V+ F P P            L+  
Sbjct: 16  GCVLTIGNFDGVHRGHQVLL-QNLKLKGAQLGLPTVVMIFEPQPLEFFIGDKAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L   G   L+  +F    A+ +  +F+  +LV  L VK +  G  FRFGK+R G
Sbjct: 75  RDKVKYLADSGIDYLLCVEFNQHFASLTPAEFVSDLLVSKLGVKYLAIGDDFRFGKNRMG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ G ++GF     +   ++  +I SS+ IR A+ + ++  A  LLG+ + I   
Sbjct: 135 DFAFLQQAGSEFGFEVADTESFCDSGLRI-SSTAIRRAIQENNLELAESLLGHSYRISGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG ++GRT+GFPTAN+ L   +    GVYA+           GVAN G  PT+   G 
Sbjct: 194 VVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVYGLGDKPLPGVANIGTRPTVSGKGT 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             LE  + D + ++YG+   V     LR E +F  +E LK  +  D   AR+ L +
Sbjct: 254 -QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLEALKEQIANDVIAAREYLTA 308


>gi|82703766|ref|YP_413332.1| riboflavin biosynthesis protein RibF [Nitrosospira multiformis ATCC
           25196]
 gi|82411831|gb|ABB75940.1| FMN adenylyltransferase / riboflavin kinase [Nitrosospira
           multiformis ATCC 25196]
          Length = 335

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 165/338 (48%), Gaps = 28/338 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + H   +    P  L      IGNFDG+HLGH  +L +  K A+   +   V+ F PH
Sbjct: 1   MRISHGTPVQADAPVAL-----TIGNFDGVHLGHQAMLARLKKAADRLGVESCVMIFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR           L+  S++EK+  L   G   +   +F  + A   AE FI ++L   L
Sbjct: 56  PREFFAPDKAPTRLT--SLREKLELLAAAGVERVQICRFDFDFARIPAEDFIVRILQHGL 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  FRFG  RAGD  +L+    + GF    +     N  + VSS+ +R AL  
Sbjct: 114 AARWILVGDDFRFGARRAGDYEMLKAFSAECGFEVEDMPGFTVNGLR-VSSTAVREALAA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ--- 233
           G +     LLG  ++I   V+ G+K+G+ +GFPTAN+QL  +     G++A+    +   
Sbjct: 173 GDLDLVKRLLGRFYSISGRVVDGDKLGKKIGFPTANIQLKHNRPPLAGIFAVEVEMEASG 232

Query: 234 DQTSYS----------GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           ++T  S          GVA+ G  PT+  +G  +LE  +FDF QEIYG+   V F   LR
Sbjct: 233 NETPPSLEVPSLDTLRGVASLGVRPTVHEHGKPVLEVHLFDFDQEIYGRHLRVHFLHKLR 292

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKI---LESSYPLSER 318
            E K+  +E L   +G D   A+     L ++  LSE+
Sbjct: 293 DEEKYSGLEALTRQIGRDVDNAKNYFSSLSAAPALSEK 330


>gi|325267567|ref|ZP_08134219.1| riboflavin biosynthesis protein RibF [Kingella denitrificans ATCC
           33394]
 gi|324980917|gb|EGC16577.1| riboflavin biosynthesis protein RibF [Kingella denitrificans ATCC
           33394]
          Length = 365

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 154/310 (49%), Gaps = 17/310 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQ 64
           I   Q+ P+  +G  + IGNFDG+H GH  IL++    A    +  ++  F P P     
Sbjct: 53  IWFGQNAPHLPQGSALTIGNFDGVHTGHRHILQRLHVQAQERNLHAIAMIFEPQPAEFFS 112

Query: 65  SSS--PIFT-LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++  P  + ++P   +  +L + G    +   +F    A   AE FI+  L E L  + 
Sbjct: 113 RAAKQPAPSRITPLRDKLHLLAQTGCLHGVWVQRFNAHCAQTEAEDFIRNTLRERLNTRY 172

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN---KSQIVSSSNIRTALTKG 177
           ++ G  FRFGK R GD  +L  + +       F+ E   +     +  SS+ +R AL +G
Sbjct: 173 LLVGDDFRFGKARGGDFALLSAQAD-------FVTERTPSILVAGERASSTAVRQALAEG 225

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  +LG+ +++   V HG KIGRTLG PTAN+ L       +GV+ +  R      
Sbjct: 226 SLHRAEQILGHGYSLSGRVKHGAKIGRTLGCPTANIHLPSHTYALQGVFVVSVRGAF-GE 284

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +GVA+FGRNPT+       LE  + DF  ++YGQR  + F   LR EIKF D+  L+  
Sbjct: 285 CAGVASFGRNPTVSDTPAAKLEVHLLDFHGDLYGQRLHIRFLHKLRDEIKFADLGSLQTQ 344

Query: 298 MGEDEKKARK 307
           +  D   AR+
Sbjct: 345 IAADILAARQ 354


>gi|256371444|ref|YP_003109268.1| riboflavin biosynthesis protein RibF [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008028|gb|ACU53595.1| riboflavin biosynthesis protein RibF [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 314

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 8/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP-RTIIQSSSPIFTLSPPSI 77
           VV IG FDG+HLGH  ++  A  +A  +  P+ V+SF+ HP R +     P   ++P   
Sbjct: 18  VVTIGTFDGLHLGHQRLIRVARDVARRARLPLVVVSFDRHPLRLLAPERVPPLIMTPLQ- 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++++L   G   L    F  E A  +   F  +VL   L    V+ G  F FG   AG  
Sbjct: 77  RDRVLASQGVGVLYLLHFGPERAQQAPASFAAEVLASRLGATHVVVGANFTFGARGAGRP 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L   G   GF +V ++EL ++  ++VSSS IR  +  G ++ A+ LLG  + +E  V+
Sbjct: 137 ADLVAMGRDLGF-SVDVEELVDDDGEVVSSSRIRATVASGDLVEASRLLGRAYAVEGVVV 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP-NGP 255
            G+  GR LGFPTAN+ +S       +GVYA  +   D   ++   + G  PT  P +G 
Sbjct: 196 AGDGRGRELGFPTANVVVSSSYASPPDGVYA-GWAWNDSGRWAAAISLGTRPTFYPTDGL 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LLE  + D   ++YGQ   V+F   LR ++ F  +E+L   M  D  + R
Sbjct: 255 RLLEVHLLDADVDLYGQSLEVAFDSRLRGQVAFAGVEELIAQMHADVAEVR 305


>gi|311280994|ref|YP_003943225.1| riboflavin biosynthesis protein RibF [Enterobacter cloacae SCF1]
 gi|308750189|gb|ADO49941.1| riboflavin biosynthesis protein RibF [Enterobacter cloacae SCF1]
          Length = 312

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 149/298 (50%), Gaps = 4/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L++  A       P+ V+ F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQRLRAEGRERGLPVVVMIFEPQPLELFAVDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L + G   ++  +F    A  +A+ FI ++LV+ L V+ +  G  FRFG  R GD
Sbjct: 76  EKLRYLAESGVDYVLCVRFDRRFAALTAQAFIGELLVKRLGVRYLAVGDDFRFGAGREGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G ++ F             +I SS+ +R AL    +  A  LLG+ FTI   V
Sbjct: 136 FLLLQKAGAEFSFDVTSTQTFCEGGLRI-SSTAVRQALANDDLGLAQTLLGHPFTISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG+++GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT V     
Sbjct: 195 VHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDTPLPGVANIGTRPT-VAGVRQ 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 254 QLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTAREFFGLAKP 311


>gi|229104371|ref|ZP_04235040.1| FMN adenylyltransferase [Bacillus cereus Rock3-28]
 gi|229117295|ref|ZP_04246673.1| FMN adenylyltransferase [Bacillus cereus Rock1-3]
 gi|228666195|gb|EEL21659.1| FMN adenylyltransferase [Bacillus cereus Rock1-3]
 gi|228679069|gb|EEL33277.1| FMN adenylyltransferase [Bacillus cereus Rock3-28]
          Length = 335

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFHPHPSVVLGKKEAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   N 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKENE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   S 
Sbjct: 267 RQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQEYFASE 325


>gi|114320012|ref|YP_741695.1| riboflavin kinase / FMN adenylyltransferase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226406|gb|ABI56205.1| FMN adenylyltransferase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 322

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 152/317 (47%), Gaps = 11/317 (3%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
            HN++     P H +G  + IGNFDG+HLGH  +L+     A     P  +L+F PHP  
Sbjct: 7   LHNLQ-----PRH-RGCALTIGNFDGVHLGHQAMLDTLGLAAQRLGVPPLLLTFEPHPLE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            ++       ++P   +   L +     ++  +F    A  SAE F+ ++L+  L V+ +
Sbjct: 61  ALRPEQAPTRITPLRDKLAALAETPLQRVVVARFGAALAGMSAEAFVDELLIGRLGVRHL 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG+ R GD  +L +   ++GF    ++ L     + +SS+ +R AL  G +  
Sbjct: 121 LIGDDFRFGRARRGDYAMLAEASRRHGFELDRLETLATEDGERISSTRVRAALAAGDLGE 180

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSG 240
           A  LLG  +T+   V+ G+ IGR LGF TAN+    +      G++ +           G
Sbjct: 181 AEDLLGRPYTLSGRVVRGDAIGRRLGFRTANIAFRANQRPALGGIFTVSVEGVADRPLPG 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  P  V     LLE  + D+   +YG    V F   LR E  F  ++ L   +G 
Sbjct: 241 VANVGTRPA-VGGKRHLLEVHLLDWQGRLYGCHLQVRFLQRLREEWHFDSLDALSAQIGR 299

Query: 301 DEKKARKILESSYPLSE 317
           D  +AR +   + PLS+
Sbjct: 300 DVDQARALFNDN-PLSD 315


>gi|253580816|ref|ZP_04858079.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847886|gb|EES75853.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 299

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 14/293 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDGIH GH  ++E+ I +    +   VL+     RTI+                
Sbjct: 18  AVTLGKFDGIHRGHQKLVEKIIEQKQEGAQAVVLALGTASRTILTKEERC---------- 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +ILE+MG   L+    T +  +  AE FI+++L+  L+V  V  G  FRFG +R G   +
Sbjct: 68  RILEEMGVDILLECPLTEKIRHMKAENFIKEILIGDLQVSYVAVGEDFRFGYERKGTPAM 127

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G+KYGFHT  + +  + + +I SS+ +R  L +G++     L+G  F++E  V HG
Sbjct: 128 LKEFGKKYGFHTEVLPKKMDGRRKI-SSTFVREELNRGNMEKFRFLMGTDFSVEGIVEHG 186

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
             +G     PT N+    + L+   GVY      +D+ SY G+ N G  PT+     + +
Sbjct: 187 RGMGHKYLLPTTNLIPPVEKLMPPNGVYITVSHFRDR-SYQGITNVGHKPTVGGEKFIGV 245

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+++FD ++++YG+ C V F  +LRPE KF  +E LK  +  D  K ++  E+
Sbjct: 246 ETYLFDCNEDLYGEYCKVDFKKFLRPEQKFSSLEALKAQLERDAVKGQEYFET 298


>gi|325204796|gb|ADZ00250.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240355]
          Length = 306

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 21/304 (6%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+     +   +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAALAGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT--SYSGVA 242
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +     D T  +  GVA
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVE---ADGTFGTRRGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|52841171|ref|YP_094970.1| riboflavin biosynthesis RibF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628282|gb|AAU27023.1| riboflavin biosynthesis RibF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 328

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 149/299 (49%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKTLRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A   A  F Q  L E L+++ ++ G  FRFGK R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTPALYFAQFYLFEALKIRYLLVGQDFRFGKSREG 134

Query: 136 DRGILQKRGEKYGFH-TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           D  +L+  G  Y    TV  D L  N+   +SS+ IR AL +G++  AA LLG  +++  
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLIENEK--ISSTRIREALQQGNLRFAAKLLGRPYSMCG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT V   
Sbjct: 193 RVIKGDGRGRQWGIPTANLGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPT-VAGT 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             +LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++
Sbjct: 251 KNILEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLKQNW 309


>gi|297156806|gb|ADI06518.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces bingchenggensis BCW-1]
          Length = 327

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 157/309 (50%), Gaps = 9/309 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH +I+ + +  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQVIISRTVARARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +  S   F+ KVLV+ L  + V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAGLGVDAVLILPFTAEFSRLSPGDFVVKVLVDKLHARAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   LQ+ G  Y +    +D  +   +   +  SS+ +R  + +G V  A  +
Sbjct: 128 FGHKAAGNVAFLQELGTTYDYEVEVVDLYQRGAAGGGEPFSSTLVRRLVAEGDVAGAMEV 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPADGVYAGWLTAQGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  YLR +  F  IE L   M  D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAYLRGQETFSSIEALLERMAVDVK 305

Query: 304 KARKILESS 312
           +AR+++E++
Sbjct: 306 RARELVEAA 314


>gi|224537672|ref|ZP_03678211.1| hypothetical protein BACCELL_02554 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520731|gb|EEF89836.1| hypothetical protein BACCELL_02554 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 305

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 166/308 (53%), Gaps = 8/308 (2%)

Query: 7   IEINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTII 63
           +++ +++P  L    VA IG FDG+H GH  ++EQ   + +A+     V++F  HPR ++
Sbjct: 1   MQLLRNIPEVLPQPCVATIGFFDGVHRGHRYLIEQVREVAVAHGFASGVVTFPVHPRKVV 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           Q       L+    +  +L + G    +   FT E A  SA++F+   L     ++ ++ 
Sbjct: 61  QPEYHPELLTTYEEKVTLLAETGLDYCMMLDFTPEVAILSAKEFML-FLYNHYNIRALVI 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG +R+       + G++ G   V +     +K   VSSS IR  L++G+V  AA
Sbjct: 120 GYDHRFGHNRSEGFDDYVRYGQELGI-KVILAHAYIDKDVAVSSSVIRQLLSEGNVSEAA 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGV 241
             LGY + +   V+ G ++GR +GFPTAN+++  PD L+  +GVYA+R     Q SY G+
Sbjct: 179 SCLGYDYFLNGIVVSGYRVGRKIGFPTANLRVDDPDKLVPSDGVYAVRVTVAGQ-SYGGM 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + G  PTM       +E  IF+F  +IY Q   +SF  YLRPE+KF  I++L   + +D
Sbjct: 238 LSIGYRPTMANGTDRSIEVNIFNFHSDIYEQYICLSFVRYLRPELKFDSIDELIAQLHKD 297

Query: 302 EKKARKIL 309
           ++ A + L
Sbjct: 298 KEIASRYL 305


>gi|210612472|ref|ZP_03289330.1| hypothetical protein CLONEX_01531 [Clostridium nexile DSM 1787]
 gi|210151580|gb|EEA82587.1| hypothetical protein CLONEX_01531 [Clostridium nexile DSM 1787]
          Length = 311

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 157/297 (52%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   + +G FDG+H+GH  ++E+ I    N  +   V +F+  P            ++  
Sbjct: 14  KKTAITLGKFDGLHIGHETLIERIIAHQKNDGVDSVVFAFDMAPLYEKLKKKKESLITNE 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
               ++L ++ +  L+   F    +   AE FI+++LVE    K ++ GT F FG  + G
Sbjct: 74  ERAGRLLGRVDY--LVECPFVEAVSKIEAETFIKEILVEQFHAKYIVVGTDFHFGYQKKG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ+   +YG+    I E +  + + +SS+ I+  + KG++     LLGY +T+  +
Sbjct: 132 DYHMLQQYSGEYGYEVEVI-EKKCYEDREISSTYIKEEVKKGNMKLVTQLLGYPYTVTGE 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V +G+++GR LGFPT N+    + LL   GVY    R  D   Y G++N G  PT+    
Sbjct: 191 VQYGKQLGRKLGFPTMNIVAEKEKLLPPNGVYVSSIRI-DGMLYGGISNIGCKPTVSEKE 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +E+F+FD+  + YG++  V+ ++Y+RPE KF  +E L+  + +D    RK L+ 
Sbjct: 250 QMGIETFVFDYHGDAYGKKIEVALYEYVRPEKKFHSVEMLRKQVEQDIAYGRKWLQG 306


>gi|118465455|ref|YP_882855.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium 104]
 gi|118166742|gb|ABK67639.1| riboflavin biosynthesis protein RibF [Mycobacterium avium 104]
          Length = 307

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 21/310 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+H GH  ++  A+K   A N P  +++F+PHP  ++   S    L+  + +
Sbjct: 1   MLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPHPMEVVYPGSHPAQLTTLTRR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F FGK   G+  
Sbjct: 61  AELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHVVEVVVGENFTFGKKATGNVE 120

Query: 139 ILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            L++ GE++GF       + E  +N++   SS+ IR+ +  G V+ A   LG    +E  
Sbjct: 121 TLRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVDAGDVVAAMEALGRPHRVEGV 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ----------TSYSGVA 242
           V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F                 Y    
Sbjct: 181 VVRGEGRGIQLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVIPGERYQAAV 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NPT        +E+F+ D   ++YGQ   + F   +R + KF  ++ L + MG+D 
Sbjct: 239 SVGTNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRGQHKFDSVDDLVVAMGQDT 297

Query: 303 KKARKILESS 312
           ++AR++L + 
Sbjct: 298 ERARQLLSAG 307


>gi|229824774|ref|ZP_04450843.1| hypothetical protein GCWU000182_00123 [Abiotrophia defectiva ATCC
           49176]
 gi|229791103|gb|EEP27217.1| hypothetical protein GCWU000182_00123 [Abiotrophia defectiva ATCC
           49176]
          Length = 299

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 157/293 (53%), Gaps = 5/293 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L    V IG FDG+HLGH  ++ + +  +N     + +F+ +P +     + +  +    
Sbjct: 11  LSDTAVTIGKFDGLHLGHKELINEVLS-SNGLTKVLFTFDVNPLSKFFDRT-MRVIDTNE 68

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +++  G   +I + F  ET N SA+ FI+ ++ + L  K ++ GT FRFGK R GD
Sbjct: 69  ERRMLVQNFGLDYMINFPFDKETINTSADDFIKNIIHDKLGAKKLVVGTDFRFGKGRLGD 128

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+KR   +G+    I + +    + +SS+ IR  + KG +     LLG  F++   +
Sbjct: 129 VDYLEKRSGDFGYELKVIAK-KVMYGEEISSTRIRELIKKGDIKTVNDLLGRTFSVSGII 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHG  +G T+G PT N++   + LL   GVYA      D   Y G+ N G  PT+  N  
Sbjct: 188 IHGNHLGHTVGMPTINIKPDENKLLPPFGVYASDTEL-DGKIYRGITNIGVKPTISENNA 246

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           + +E+++F  ++++YG    V+  D++RPE+KF  +E++K  +  D  KA++I
Sbjct: 247 VGVETWLFGLNEDVYGHFAKVNLLDFIRPEMKFASLEEVKKQVNIDVIKAKEI 299


>gi|299531571|ref|ZP_07044977.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Comamonas
           testosteroni S44]
 gi|298720534|gb|EFI61485.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Comamonas
           testosteroni S44]
          Length = 353

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 152/322 (47%), Gaps = 34/322 (10%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP--- 75
            V IGNFDG+H GH  +L   +A       P   ++F PHPR           L+P    
Sbjct: 17  AVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPHPRDYFAQKLGKPELAPARVG 76

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           ++++K+  LE  G   ++   F    A+ S E FIQ VL+  L  K V+ G  FRFG  R
Sbjct: 77  TLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLISGLGAKYVLVGDDFRFGSKR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+  GF     D  R N  ++    VSS+ +R AL  G +  AA LLG+ 
Sbjct: 137 AGDYAMLDNAGQALGF-----DVARMNSYEVHGLRVSSTAVREALAAGDMQQAAKLLGHP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++         G++A+           G
Sbjct: 192 YRISGHVVHGRKLGRKLAESMSGAEDGFRTLNLRFDHWKPAASGIFAVLVHGLTDKPLQG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ PN    G +LLE+  FD+  ++     YG+   V     L  E+K+  +
Sbjct: 252 VANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIRVELLHKLHDELKYDSL 311

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L + + +D   AR    S++
Sbjct: 312 DALTVGIAKDCDDARAFFASAH 333


>gi|183600975|ref|ZP_02962468.1| hypothetical protein PROSTU_04590 [Providencia stuartii ATCC 25827]
 gi|188019307|gb|EDU57347.1| hypothetical protein PROSTU_04590 [Providencia stuartii ATCC 25827]
          Length = 312

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 4/295 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH ++L+   +       P  V+ F P P            L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQVLLQNLKQKGEQLGLPSVVMIFEPQPLEFFIGDKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L   G   L+  +F    A+ + ++F+ ++LV+ L VK +  G  FRFGK+R GD
Sbjct: 76  DKVKYLADSGIDYLLCVEFNQHFASLTPDEFVAELLVKKLGVKYLAIGDDFRFGKNRMGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              LQ+ G +YGF     +   ++  +I SS+ IR A+    +  A  LLG+ + I   V
Sbjct: 136 FAFLQQAGSQYGFQVADTESFCDSGLRI-SSTAIRKAIQDNDLALAETLLGHPYRISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GRT+GFPTAN+ L   +    GVYA+           GVAN G  PT+   G  
Sbjct: 195 VHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVYGLGDKPLPGVANIGTRPTVSGKGQ- 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LE  + D + ++YG+   V     LR E +F  ++ LK  + +D   AR  L +
Sbjct: 254 QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLDALKEQIAKDVIAARDYLAA 308


>gi|68171902|ref|ZP_00545225.1| Riboflavin kinase / FAD synthetase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658244|ref|YP_507846.1| riboflavin biosynthesis protein RibF [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998677|gb|EAM85406.1| Riboflavin kinase / FAD synthetase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599701|gb|ABD45170.1| riboflavin biosynthesis protein RibF [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 317

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 11/307 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A GNFDGIHLGH  I+     I+    IT  V++F+PHP   +++      L    ++
Sbjct: 17  VLAFGNFDGIHLGHQSIINAIKNISVREKITSVVITFSPHPAEYLRNKQNFLLLD---LE 73

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +KI  L+  G   L    F    A  S + FI+ VLV    +K ++ G    FG    G+
Sbjct: 74  QKIELLQSYGIDYLYIIDFNESFAQLSPDAFIKDVLVNSCRIKYIVVGHSCFFGHKCLGN 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L      Y +  V ID +  N  ++ SSS IR  L++G V  A+ +LG  + I   V
Sbjct: 134 IDLLYSYANIYDYEIVRIDPIFIN-DKLCSSSLIREYLSEGKVDLASKILGRPYQINGKV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGP 255
           I G   GR +GFPT N+ +   ++ + GVY+   +  D   + +G+ N G  PT      
Sbjct: 193 IKGLARGRVIGFPTVNVDIKHILVPRVGVYSACIKIDDNNVWLNGIVNIGFRPTFNDLSF 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            +LE  IFDF  +IY Q   +   D++RPE KF  IE+LK  + ED  + +K L+  Y  
Sbjct: 253 PILEMHIFDFDSDIYNQHVAIQLLDFIRPERKFSSIEQLKQQINEDIIQVKKSLK--YIG 310

Query: 316 SERDRII 322
           S+ D ++
Sbjct: 311 SKDDEVV 317


>gi|110833319|ref|YP_692178.1| FAD pyrophosphorylase [Alcanivorax borkumensis SK2]
 gi|110646430|emb|CAL15906.1| FAD pyrophosphorylase [Alcanivorax borkumensis SK2]
          Length = 325

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 34/317 (10%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V  IGNFDG+H GH  IL+Q I  A    +  TV+ F P P+      +     +PP
Sbjct: 15  RGCVATIGNFDGVHQGHQRILDQVIAEARGRGLKATVMLFEPQPQEFFSPQT-----APP 69

Query: 76  ---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              S+++K+  L + G   ++  +F     + +A+ F++ +LV+ L V+ ++ G  FRFG
Sbjct: 70  RLMSLRDKLIALREAGVDQVLCLRFDERFRSLTAQAFVKGLLVDGLGVEYLVVGDDFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTV--FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
             R GD   LQ+ G+++ F        E+  ++   VSS+ +R AL +G    A  LLG 
Sbjct: 130 CGRDGDFSYLQQAGKQFDFAVTDTATCEIEGDR---VSSTRVRAALREGDFALAERLLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            F I   V HG+KIGRTLG PT N+ L        GV+A+       T   G AN G  P
Sbjct: 187 PFAISGRVRHGDKIGRTLGLPTVNLALKRLQSPLHGVFAVAVTGAGLTDQPGAANMGTRP 246

Query: 249 TMVPNGPL-LLESFIFDFS--------------QEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           T+  NG    LE ++ D+                 +YG   TV+F  Y+RPE KF D++ 
Sbjct: 247 TV--NGTENRLEVYLLDYGDPAGSSGDAQCSHQDSLYGAHLTVAFRHYVRPEEKFADLDL 304

Query: 294 LKIYMGEDEKKARKILE 310
           LK  + +D    R   +
Sbjct: 305 LKTAIRQDINAVRAFFD 321


>gi|17232340|ref|NP_488888.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nostoc sp.
           PCC 7120]
 gi|17133985|dbj|BAB76547.1| riboflavin kinase/FAD synthase [Nostoc sp. PCC 7120]
          Length = 362

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 166/338 (49%), Gaps = 53/338 (15%)

Query: 21  VVAIGNFDGIHLGHHLILE---QAIKIAN-------------NSPI--------TVLSFN 56
            VA+G FDG+HLGH  +++   Q+ + A              N P         TV++F 
Sbjct: 25  AVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPAAPQERIYSTVVTFR 84

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+      +  + L+P   + + L  +G   L+   F  E    S E+F++K+LV+ L
Sbjct: 85  PHPQEFFTGQARTW-LTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEKILVQQL 143

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI------------ 164
             + +  G  F FGK R G    LQ    KY    V I  L+ +  Q             
Sbjct: 144 RCQRISVGQDFCFGKQRRGTAKDLQLIAAKYHI-PVSIVPLQTSDGQFLEDGNCGSFESL 202

Query: 165 ----VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
               +S+S IR AL  G +  A   LG  + +   V+ GE++GRT+GFPTAN++L  D  
Sbjct: 203 EDAPISTSLIRQALETGDIKTANRFLGRPYILIGVVVEGEQLGRTIGFPTANLELPKDKF 262

Query: 221 L-KEGVYAIRFRTQDQTSYS-------GVANFGRNPTMVPNGPL-LLESFIFDFSQEIYG 271
           + ++GVYA+R +   +++ +       GV N G  PT+  NG    +E ++ D+S ++YG
Sbjct: 263 VPRQGVYAVRVKILGESADANIPLEILGVMNIGNRPTV--NGTYSSVEVYLLDWSGDLYG 320

Query: 272 QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   V   D+LRPE KF  +E LK  + +D   AR+IL
Sbjct: 321 KELAVQLVDFLRPEQKFPSLEALKAQIQQDCTVARQIL 358


>gi|124514862|gb|EAY56373.1| riboflavin kinase / FAD synthase (RibC) [Leptospirillum rubarum]
          Length = 319

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 151/302 (50%), Gaps = 6/302 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDGIH GH  +L   ++ +  +    TVL+F+PHP  ++    P   +     +
Sbjct: 21  ALTIGNFDGIHQGHQKLLNDLVEYSRKTKTLATVLTFDPHPLMVLSPEIPFQRIMSIPHK 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +K+L  +G   L+   FT +      E FI+ +L+ +  +K ++ G  FRFG  RAG   
Sbjct: 81  KKVLADLGIDLLVITPFTPDLGRMEPETFIRDILLGYFPLKALVIGEGFRFGHKRAGSVA 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             Q+     G     I  + +   +I SSS IR  L  G V  A   L   F ++  V  
Sbjct: 141 DFQRVLSPEGVLVKAIPAVEDGTGRI-SSSRIRELLRAGRVKEANRFLTRPFQLDGTVEE 199

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           GEK GR LGFPT N+  +PD LL   GVY  R +T  +  ++G +  G+ PT  P    +
Sbjct: 200 GEKRGRKLGFPTLNIHPTPDRLLPASGVYVTRTKTP-KGWFNGTSYVGKKPTFTPLVQPV 258

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E+ +FDFS  +YGQ   V F ++LR +  F   E L   +  D ++++     + P+ +
Sbjct: 259 IETHLFDFSDTLYGQYIQVDFLEFLRGDKAFPGPEALISAISNDLQQSKDYFREN-PIPQ 317

Query: 318 RD 319
            D
Sbjct: 318 GD 319


>gi|88707062|ref|ZP_01104758.1| Riboflavin biosynthesis protein ribF [Congregibacter litoralis
           KT71]
 gi|88698712|gb|EAQ95835.1| Riboflavin biosynthesis protein ribF [Congregibacter litoralis
           KT71]
          Length = 317

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 3/297 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           SL   ++  V  IG FDG+HLGH  ++ Q  +     + P TV++F P PR  + + S  
Sbjct: 9   SLRAKIRPSVATIGAFDGVHLGHQTVISQLAEQGRKFDLPTTVVTFEPLPREYLAADSAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     + + L  +G   L+  +F       SAE+F + + VE L V+ ++ G  FRF
Sbjct: 69  ARLQSFRERFESLAALGVDRLLCLRFNETLRQMSAEEFAENIFVEGLGVRALVLGDDFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G DR G   +++  G++ GF T+  + +   + + VSS+ +RTAL  G    A   LG  
Sbjct: 129 GHDREGGFSLMESIGKREGFDTLATETI-EVEGERVSSTRLRTALAAGDFATARACLGRD 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V++G ++GR +G PTAN+ L    +   GV+A+            +A+ G  PT
Sbjct: 188 YEISGRVVYGRQLGRQIGSPTANIALRRRSVPLSGVFAVTVSGGGLDDAPAIASVGVRPT 247

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +       LE  I D    +YGQR +V F    R E +++ +E LK  + ED + AR
Sbjct: 248 VEEGLKPNLEVHILDGDHTLYGQRISVRFLHKFREEERYESVEILKAKIHEDIEGAR 304


>gi|189460635|ref|ZP_03009420.1| hypothetical protein BACCOP_01276 [Bacteroides coprocola DSM 17136]
 gi|189432594|gb|EDV01579.1| hypothetical protein BACCOP_01276 [Bacteroides coprocola DSM 17136]
          Length = 308

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 158/308 (51%), Gaps = 7/308 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSS 66
           I   +   L   V  IG FDG+H GH  +++Q  K A   N    +++F  HPR ++QSS
Sbjct: 4   ITDEIKQTLLPCVATIGCFDGLHRGHRFLIKQVCKEARQRNFHSALITFPIHPRQVMQSS 63

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                L+    +  ++++      I   FT E +  SA +F+Q +L E   V+ ++ G  
Sbjct: 64  YRPQWLTCLPQKTALIQQTEADYCIMLPFTKELSLLSAREFMQ-LLRERFNVRVLVIGYD 122

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            RFG +R        + G++ G   +    L  +   I SSS IR  L  G + +A H L
Sbjct: 123 HRFGHNRCEGFDDYCQYGKELGIEVIRAQALIEDGVSI-SSSVIRKVLKDGDIQHANHYL 181

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           GY + ++  V+ G K+GR LGFPTAN+  S PD L+ KEGVYA+ +   D+  Y+G+ N 
Sbjct: 182 GYHYYLDGTVVDGYKVGRKLGFPTANLLPSCPDKLIPKEGVYAV-YAYIDEVRYAGMLNI 240

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+     L +E  I +FS +IY     + F +++R E KF  +EKL   +  D + 
Sbjct: 241 GHRPTVDNGSNLSIEVHILNFSGDIYNHHMRIEFIEFIRQEQKFDSLEKLITQLNTDRET 300

Query: 305 ARKILESS 312
             ++L  S
Sbjct: 301 VSRLLLHS 308


>gi|255655326|ref|ZP_05400735.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63]
 gi|296451311|ref|ZP_06893051.1| possible FAD synthetase [Clostridium difficile NAP08]
 gi|296880337|ref|ZP_06904300.1| possible FAD synthetase [Clostridium difficile NAP07]
 gi|296259917|gb|EFH06772.1| possible FAD synthetase [Clostridium difficile NAP08]
 gi|296428578|gb|EFH14462.1| possible FAD synthetase [Clostridium difficile NAP07]
          Length = 309

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 158/284 (55%), Gaps = 9/284 (3%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLS 73
           ++K  V+ IGNFDG+H GH +++ + ++ A    I   V +F  HP    + +S    +S
Sbjct: 12  NIKESVITIGNFDGVHKGHQVLIGKTVEHAKKENIQSIVFTFANHPVNYFRPNSTKNIIS 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + K+LE +G   ++   F        A+ F+ ++LV+ L+ K ++ G  F F + +
Sbjct: 72  NDD-KIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKAKKIVIGHDFTFARAK 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +L+    ++GF    I  ++ N  + VSS+ IR+ +++G + +    LG  + +E
Sbjct: 131 EGNVNLLKSLEHEFGFEVEVIKPIKINDVR-VSSTYIRSLVSQGDMASVKEYLGRNYKLE 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIH + +GRT+GFPTAN+ L  ++L+ K G+YA      D+T Y G  N G NPT+  
Sbjct: 190 GCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET-YFGATNVGYNPTV-- 246

Query: 253 NGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           NG  L +E+ I +F ++IYG+   V F + +R E KF  I+ LK
Sbjct: 247 NGKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLK 290


>gi|264676998|ref|YP_003276904.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni CNB-2]
 gi|262207510|gb|ACY31608.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni CNB-2]
          Length = 353

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 152/322 (47%), Gaps = 34/322 (10%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP--- 75
            V IGNFDG+H GH  +L   +A       P   ++F PHPR           L+P    
Sbjct: 17  AVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPHPRDYFAQKLGKPELAPARVG 76

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           ++++K+  LE  G   ++   F    A+ S E FIQ VL+  L  K V+ G  FRFG  R
Sbjct: 77  TLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLISGLGAKYVLVGDDFRFGSKR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+  GF     D  R N  ++    VSS+ +R AL  G +  AA LLG+ 
Sbjct: 137 AGDYAMLDNAGQALGF-----DVARMNSYEVHGLRVSSTAVREALAAGDMQQAAKLLGHP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++         G++A+           G
Sbjct: 192 YRISGHVVHGRKLGRKLAESMSGAEDGFRTLNLRFDHWKPAASGIFAVLVHGLTDKPLQG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ PN    G +LLE+  FD+  ++     YG+   V     L  E+K+  +
Sbjct: 252 VANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIRVELLHKLHDELKYDSL 311

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L + + +D   AR    S++
Sbjct: 312 DALTVGIAKDCDDARAFFASAH 333


>gi|138894787|ref|YP_001125240.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266300|gb|ABO66495.1| Riboflavin kinase [Geobacillus thermodenitrificans NG80-2]
          Length = 326

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 18/314 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H+ E  Q+LP      V+A+G FDGIHLGH  ++  A++IA        V++F+PHP  +
Sbjct: 10  HHFE-RQALPP----TVMALGYFDGIHLGHQKVIATAVEIAKQRGYESAVMTFHPHPSVV 64

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +     +  ++P   +E+++  +G + L   +FT   A    EQF+ + L E+  VK ++
Sbjct: 65  LGKQPELRLITPLGKKEQLIAALGVNRLYIVEFTPAFAGLLPEQFVDQYLDEF-HVKHIV 123

Query: 123 TGTKFRFGKDRAG--DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G  F +G+   G  +   L  RG    F    I ++     + VSS+ +R  + +G V 
Sbjct: 124 AGFDFTYGRFGKGTMETMPLHARGR---FEQTIIPKMTVGGEK-VSSTRVRKLIEEGAVE 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYS 239
               LLG  + IE  V+ GE+ GRT+GFPTAN+ L+ D LL   GVYA++     Q  Y 
Sbjct: 180 QLPRLLGRFYDIEGTVVTGERRGRTIGFPTANIALNGDYLLPAIGVYAVKATIGGQV-YE 238

Query: 240 GVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           GVAN G  PT      G   +E  +F+F+++IYG+  T+ +   LR E KF  + +L   
Sbjct: 239 GVANIGYKPTFHETREGLPSIEVHLFEFARDIYGETVTIEWHRRLRGEQKFASVAELTAQ 298

Query: 298 MGEDEKKARKILES 311
           +  D+++A+K   S
Sbjct: 299 IARDKEEAKKYFHS 312


>gi|118580929|ref|YP_902179.1| riboflavin biosynthesis protein RibF [Pelobacter propionicus DSM
           2379]
 gi|118503639|gb|ABL00122.1| FMN adenylyltransferase [Pelobacter propionicus DSM 2379]
          Length = 325

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 154/295 (52%), Gaps = 9/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV IGNFDG+H GH  +L    +Q+ ++A   P  V++F PHP  ++        ++   
Sbjct: 18  VVTIGNFDGVHRGHVALLRHLKQQSARLA--LPSVVVTFEPHPLALLTPEISPTLITTFE 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  ++ + G   L+   FT   +  SAE F++ VL   L ++ +I G  + FG+DR G+
Sbjct: 76  QKCALIGEQGVDCLVVIGFTQAFSMLSAEAFVRDVLCHSLGMRHIIIGHDYAFGRDRQGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +   +  F    +D +      + SSS +R  +T+G V  AA +LG    +   V
Sbjct: 136 YETLARMMGECRFTLEELDPV-GTDGLVFSSSLVRRLVTEGDVSAAARILGRYHVVAGHV 194

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           +HG ++GR LGFPTAN+    +++  +GVYA+    + +  Y G  N G NPT+   G  
Sbjct: 195 VHGRQVGRELGFPTANVAPQNELIPHDGVYAVMVAVEGEL-YQGACNIGTNPTL-GQGER 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E F+ DFS ++Y +  ++ F   LR E KF D + L   + +D +  R +L +
Sbjct: 253 SIEVFLLDFSGQLYDRELSICFVQRLRGERKFPDAQTLIRAIRQDVQTTRDVLAA 307


>gi|95928776|ref|ZP_01311522.1| riboflavin biosynthesis protein RibF [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135121|gb|EAT16774.1| riboflavin biosynthesis protein RibF [Desulfuromonas acetoxidans
           DSM 684]
          Length = 324

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 153/302 (50%), Gaps = 5/302 (1%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSI 77
            VV +GNFDG+HLGH  I    ++ A N   T  V +F PHP  ++ +      ++ P  
Sbjct: 17  AVVTLGNFDGVHLGHREIFRSVVESARNEGGTSIVCTFEPHPLKLLAADRAPRLINTPQE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+++       L+   FT E A    EQF+ ++L+E + +K ++ G  + FGK R+G  
Sbjct: 77  RERLIGASCVDVLLVLPFTPELAALDPEQFVDQILIERIGLKHLVVGYDYAFGKGRSGSI 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+++G++ GF  V +      + Q++SS+ +R  +  G V     LLG  F  E  V+
Sbjct: 137 EFLREQGQRKGF-IVDVFGPVQKQGQVISSTRVRQHVLSGDVEGVVALLGRHFNFEGQVV 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG+  G  LGF TAN+    +++   GVYA       +  Y  V + G   T   + PL 
Sbjct: 196 HGDGRGHNLGFATANLATEKELIPASGVYACIAMVHGK-EYKSVVSIGCKTTF-GDHPLT 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E+ +FDF +++Y Q   + F   LR +  F D + L   + +D  +A   LE +  +  
Sbjct: 254 IEAHLFDFKEDVYDQTMRLYFVKKLRNQKTFSDKDALIGAIEQDVTEAHHCLERTRIIEY 313

Query: 318 RD 319
           R+
Sbjct: 314 RE 315


>gi|152965432|ref|YP_001361216.1| riboflavin biosynthesis protein RibF [Kineococcus radiotolerans
           SRS30216]
 gi|151359949|gb|ABS02952.1| riboflavin biosynthesis protein RibF [Kineococcus radiotolerans
           SRS30216]
          Length = 325

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 13/302 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  +L + + +A    +    ++F+PHP  ++        L+    +
Sbjct: 18  VVTIGNFDGVHRGHAAVLGEVVGLARGRGLRSVAVTFDPHPLQVLDPERAPGLLTGLDRR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ++   G  A++   FT E A +S E+F++ V V  L    V+ G   RFG   +GD  
Sbjct: 78  LDLVAATGLDAVLVLPFTRELAGWSPERFVEDVFVGALRAAVVVVGHDVRFGAGNSGDLT 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +Q  GE++GF  V +++L +  ++      SS+ +R AL +G V  AA +LG+   I S
Sbjct: 138 TMQGLGERFGFEVVVLEDLGDPGNRAGSPRWSSTAVRAALAEGDVARAAAVLGHPHRITS 197

Query: 195 DVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+HG+  GR LG+PTAN+    +  ++  +GVYA           +   + G NPT   
Sbjct: 198 TVVHGDHRGRELGYPTANLDTDRADGLVPADGVYAGWLTRPSGQRLAAAVSIGTNPTFDG 257

Query: 253 -----NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                    L +  +     ++YG+R  +     LRP ++F  +E L   M  D    R+
Sbjct: 258 LHRQVEAYCLPQPGLEQRGLDLYGERVDLDLVARLRPTLRFDGVEALVEQMERDVAACRR 317

Query: 308 IL 309
           IL
Sbjct: 318 IL 319


>gi|77461074|ref|YP_350581.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens Pf0-1]
 gi|77385077|gb|ABA76590.1| riboflavin biosynthesis protein [Pseudomonas fluorescens Pf0-1]
          Length = 318

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 152/301 (50%), Gaps = 24/301 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 13  LHNLR-----PQH-RGCVATIGNFDGVHRGHQAILARLRERALELG--VPSCVVIFEPQP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F    +  SA +F+  +LV+ L V+
Sbjct: 65  REFFAPETAPARLARLRDKLQLLAAEGVDRVLCLAFNQRLSKLSASEFVDTILVDGLGVQ 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   L + G+ +GF      TV +D +R      VSS+ +R AL
Sbjct: 125 HLEVGDDFRFGCDRLGDFDFLLQAGQVHGFTVEAAQTVELDGIR------VSSTQVRNAL 178

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                  A  LLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY +     D
Sbjct: 179 AAADFALAERLLGRPYRIAGRVLHGQKLARQLGTPTANIQLKRRRVPFTGVYLVDVDI-D 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E L
Sbjct: 238 GKTWPGVANIGVRPTVQGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEAL 297

Query: 295 K 295
           K
Sbjct: 298 K 298


>gi|21224059|ref|NP_629838.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces coelicolor A3(2)]
 gi|256784861|ref|ZP_05523292.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces lividans TK24]
 gi|289768756|ref|ZP_06528134.1| riboflavin biosynthesis protein RibF [Streptomyces lividans TK24]
 gi|4464269|emb|CAB37472.1| probable riboflavin kinase (FAD synthetase) [Streptomyces
           coelicolor A3(2)]
 gi|289698955|gb|EFD66384.1| riboflavin biosynthesis protein RibF [Streptomyces lividans TK24]
          Length = 318

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 156/311 (50%), Gaps = 9/311 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +  SA  F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMADLGVDAVLILPFTKEFSKLSAADFVVKVLVDRLRAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L ++G+ Y F    +D      +   +  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVDFLIEQGKVYDFEVEVVDLYVTGDAGGGEPFSSTLTRRLVAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR +GFPTAN++  P   +  +GVYA     Q +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGREMGFPTANVETLPHTAIPADGVYAGWLHAQGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    E+YG    V F  ++R + KF+ ++ L   M  D  
Sbjct: 247 GTNPQF-EGTERTVEAYAIDRVGLELYGLHVAVDFVAFVRGQAKFETLDALLEQMAVDVD 305

Query: 304 KARKILESSYP 314
           + R+I  +  P
Sbjct: 306 RCREITATDAP 316


>gi|75908339|ref|YP_322635.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Anabaena
           variabilis ATCC 29413]
 gi|75702064|gb|ABA21740.1| FMN adenylyltransferase / riboflavin kinase [Anabaena variabilis
           ATCC 29413]
          Length = 352

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 165/338 (48%), Gaps = 53/338 (15%)

Query: 21  VVAIGNFDGIHLGHHLILE---QAIKIAN-------------NSPI--------TVLSFN 56
            VA+G FDG+HLGH  +++   Q+ + A              N P         TV++F 
Sbjct: 15  AVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPAAPQERIYSTVVTFR 74

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+      +  + L+P   + + L  +G   L+   F  E    S E+F++K+LV+ L
Sbjct: 75  PHPQEFFTGQARTW-LTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEKILVQQL 133

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI------------ 164
             + +  G  F FGK R G    LQ    KY    V I  L+ +  Q             
Sbjct: 134 RCQRISVGQDFCFGKQRRGTARDLQLIAAKYHI-PVSIVPLQTSDGQFLEDGNCGSFESL 192

Query: 165 ----VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
               +S+S IR AL  G +  A   LG  + +   V+ GE++GRT+GFPTAN++L  D  
Sbjct: 193 EYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIGFPTANLELPKDKF 252

Query: 221 L-KEGVYAIRFRTQDQTSYS-------GVANFGRNPTMVPNGPL-LLESFIFDFSQEIYG 271
           + ++GVYA+R +   +++ +       GV N G  PT+  NG    +E  + D+S ++YG
Sbjct: 253 IPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTV--NGTYSSVEVHLLDWSGDLYG 310

Query: 272 QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   V   D+LRPE KF  +E LK  + +D   AR+IL
Sbjct: 311 KEIVVQLVDFLRPEQKFPSLEALKAQIQQDSTVARQIL 348


>gi|56963989|ref|YP_175720.1| riboflavin biosynthesis protein RibC [Bacillus clausii KSM-K16]
 gi|56910232|dbj|BAD64759.1| riboflavin biosynthesis protein RibC [Bacillus clausii KSM-K16]
          Length = 317

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 155/289 (53%), Gaps = 9/289 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSIQ 78
           +A+G FDG+H GH  ++E A   A    I   V++F PHP+ ++ +   PI  L+P   +
Sbjct: 22  MALGYFDGVHKGHKAVIETAKAEAAKRGIQSAVMTFYPHPKEVLGKPDQPIDYLTPLQAK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              L+ +G   +    FT   +  + + FI++ ++  L VK V+ G  F +G    G   
Sbjct: 82  VARLKALGVDVVYVVHFTKAFSKLTPQAFIERFVI-GLNVKHVVAGFDFTYGVKGEGKMD 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            + +       HT    E  +++ + +SS+ IR  L++G+V  AA LLGY +     V+H
Sbjct: 141 DIDRYANGRFTHTTV--EQVSDEQEKISSTRIRKQLSEGNVSEAASLLGYPYVFSGTVVH 198

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-GPL 256
           G+  GR +G+PTAN+      I+ K GVY +   T    +Y G+AN G  PT V +    
Sbjct: 199 GDARGRLIGYPTANIVAKERFIVPKTGVYVVTL-THAGNTYEGMANIGYKPTFVDDLAKP 257

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           ++E  IFDF+QEIYG+   V+F++ +R E KF  I+++K  +G D   A
Sbjct: 258 IVEVNIFDFNQEIYGETVEVAFYERIRSEQKFSGIDEIKAQLGRDRATA 306


>gi|237709386|ref|ZP_04539867.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456442|gb|EEO62163.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 306

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 163/304 (53%), Gaps = 11/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  HPR +IQ++ 
Sbjct: 9   HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMHPRQVIQTTY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P  + ++LE       +   FT + +  SA +F+Q +L     + T++ G   
Sbjct: 65  HPQLLSSPKEKLELLETTQIDYCLLLPFTQKLSLLSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+       + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSESFEDYCRYGEELNIYIVRARAYTDGEDKI-SSSVIRQLLKEGKVSQAAQFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+    + +  + G+ N G
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGK-KWVGMLNIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E  I +FS++IY +   + F  YLRPE K+  I++L   M +D ++ 
Sbjct: 242 HRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKYLRPEEKYGTIDELIAQMHKDREET 301

Query: 306 RKIL 309
            KIL
Sbjct: 302 AKIL 305


>gi|260887256|ref|ZP_05898519.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|330838987|ref|YP_004413567.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|260863318|gb|EEX77818.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|329746751|gb|AEC00108.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
          Length = 321

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 156/302 (51%), Gaps = 9/302 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIF 70
           L +  +G V+A+G FDG+H+GH  IL++A ++A +        +F  HP ++I       
Sbjct: 10  LSDSYQGIVIALGTFDGVHIGHQSILQRARELAADIHGVSMAFTFQEHPLSVIFPERAPK 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +     +E I+EK+G   L+   FT   A  SA  F+ K+L E      V+ G  + FG
Sbjct: 70  MIRNTESKEAIIEKLGVDILMNVPFTKNFAAISATGFL-KLLQENFSPAYVVVGANYTFG 128

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
               GD   LQ+RGE++GF +   +  LR+ K  +VSS+ IR+ + +G++      L + 
Sbjct: 129 FQGTGDSAFLQQRGEEFGFVSRIGNSVLRDGK--MVSSTRIRSLIAEGNLDLVNQYLKWP 186

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
                 V +GE+ GR LGFPTAN+ L     LL  GVYA+R    D   Y GVAN G NP
Sbjct: 187 LDYTGIVTYGEQRGRKLGFPTANIALDDSYALLPNGVYAVRVHFNDAV-YPGVANIGSNP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T        LE  +  F+  +YGQ+  V F   LR E KF D++ L   +  D ++A+  
Sbjct: 246 TF-EEVERRLEVHLMQFNGNLYGQKICVDFLGKLRDEKKFPDVDALVAQIHRDIEQAQHF 304

Query: 309 LE 310
            +
Sbjct: 305 WD 306


>gi|118444321|ref|YP_878205.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           novyi NT]
 gi|118134777|gb|ABK61821.1| riboflavin biosynthesis protein RibF [Clostridium novyi NT]
          Length = 308

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 155/289 (53%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++ + I++A  NN+   V +F  HP TII        +    ++ 
Sbjct: 18  IALGSFDGLHVGHMSLINKTIELAKENNAKSMVFTFKNHPLTIINKDMAPKLIIDNKVKS 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++LEK G   +    F  E    S E FI K +VE    K +I G  +RFG    GD  +
Sbjct: 78  ELLEKCGIDIVNYVNFDNEFMKISPEDFI-KNMVECYNAKGIIVGFNYRFGYKNLGDIEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K   K+GF    I+ ++ +   +VSSS IR  +++G++  A   L   F ++  V+HG
Sbjct: 137 LKKLSIKFGFELNIIEPVKID-GDVVSSSKIRQLVSEGNITKANKFLNRPFMMQGTVVHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GR + FPT N+  +   +L K GVY    +   +  Y G+ N G NPT V +  L +
Sbjct: 196 KQLGRKINFPTTNLNYNKKFVLPKGGVYYTCVKYNGEV-YRGITNIGYNPT-VSDKKLSI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ I  F ++IY +   + F + +R E KF  IE+L   + +D+  A K
Sbjct: 254 ETHILGFEKDIYDENLKLYFCERIRSEKKFNSIEELASQLSKDKNFALK 302


>gi|164688514|ref|ZP_02212542.1| hypothetical protein CLOBAR_02159 [Clostridium bartlettii DSM
           16795]
 gi|164602927|gb|EDQ96392.1| hypothetical protein CLOBAR_02159 [Clostridium bartlettii DSM
           16795]
          Length = 309

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 11/288 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  ++E+ +  A  NN    V +F+ HP    +S      ++    ++
Sbjct: 18  VTIGKFDGLHKGHKALIEKTVDYAKKNNMKSVVFTFSNHPANFFESEKVRKIITN---KD 74

Query: 80  KI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           KI  ++ +G   +I   F       SA  F++K+LV+ L  K +  G  F F +++ GD 
Sbjct: 75  KINTMKDLGVDIVINLPFDEFMTKISAIDFVEKILVKKLNAKKIYVGHDFTFARNKEGDA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+  G +Y F    +  ++ N  + VSS+ IR  L +G V +    LG  + +E  VI
Sbjct: 135 ILLKALGGEYDFDVDIVKPIKINNIR-VSSTYIRNLLAQGKVESVKEYLGSNYIVEGIVI 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G++IGRT+GFPTAN++   +++L + G+YA +    D+  Y G  N G NPT V    L
Sbjct: 194 EGKQIGRTMGFPTANLKFKENLILPRIGIYATKVYIGDKV-YIGATNIGFNPT-VRVEKL 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            +E+ I  F+++IYG+   + F + +R E KF  +++LK  +  D KK
Sbjct: 252 SIETHILQFNEDIYGKNIKIEFLERIRDEKKFNSLDELKQQLKNDTKK 299


>gi|221068809|ref|ZP_03544914.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni KF-1]
 gi|220713832|gb|EED69200.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni KF-1]
          Length = 353

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 152/322 (47%), Gaps = 34/322 (10%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP--- 75
            V IGNFDG+H GH  +L   +A       P   ++F PHPR           L+P    
Sbjct: 17  AVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPHPRDYFAQKLGKPELAPARVG 76

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           ++++K+  LE  G   ++   F    A+ S E FIQ VL+  L  K V+ G  FRFG  R
Sbjct: 77  TLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLISGLGAKYVLVGDDFRFGARR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+  GF     D  R N  ++    VSS+ +R AL  G +  AA LLG+ 
Sbjct: 137 AGDYAMLDNAGQALGF-----DVARMNSYEVHGLRVSSTAVREALAAGDMQQAAKLLGHP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++         G++A+           G
Sbjct: 192 YRISGHVVHGRKLGRKLAESIDGSEDGFRTLNLRFDHWKPAASGIFAVLVHGLTDKPLQG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ PN    G +LLE+  FD+  ++     YG+   V     L  E+K+  +
Sbjct: 252 VANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIRVELLHKLHDELKYDSL 311

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           + L + + +D   AR    S++
Sbjct: 312 DALTVGIAKDCDDARAFFASAH 333


>gi|269127532|ref|YP_003300902.1| riboflavin biosynthesis protein RibF [Thermomonospora curvata DSM
           43183]
 gi|268312490|gb|ACY98864.1| riboflavin biosynthesis protein RibF [Thermomonospora curvata DSM
           43183]
          Length = 313

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 15/314 (4%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRT 61
           +H ++    +P      VV IG FDG+H GH  I+  A ++A    +    ++F+PHP  
Sbjct: 4   WHGLD---EVPADWGRSVVTIGVFDGVHRGHQRIVGAAAELARRRGLRSVAITFDPHPDE 60

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +++  +    LS    + ++LE++G   +I   FTLE +    ++F+Q VLV+ L    V
Sbjct: 61  VVRPGTHPPLLSSTRRRAELLEELGTDVVILLPFTLELSRMGPDEFVQSVLVDRLHAAHV 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           I G  FRFG    GD  +L++ G+KY F    +  + + ++  +SS+ IR  L  G V  
Sbjct: 121 IVGEDFRFGHKARGDVALLRELGDKYDFTAEGMPLVADGET--ISSTLIRRQLAAGDVAG 178

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSY-- 238
           AA  LG    +E  V+ G + GR LGFPTAN++    + +  +GVYA  F   D   Y  
Sbjct: 179 AAKALGRPHRVEGVVVRGHQRGRALGFPTANLETMTHMAIPADGVYA-GFLICDSERYPN 237

Query: 239 ---SGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                  + G NPT    G   +E++  D    ++YG+   V F   +R  +KF+ +E L
Sbjct: 238 FRWPAAISIGTNPTFEGAGERTVEAYALDRDDLDLYGEHMAVDFTARIRDTLKFESVEAL 297

Query: 295 KIYMGEDEKKARKI 308
              M  D  +AR++
Sbjct: 298 VEEMHRDVARAREL 311


>gi|159036976|ref|YP_001536229.1| riboflavin biosynthesis protein RibF [Salinispora arenicola
           CNS-205]
 gi|157915811|gb|ABV97238.1| riboflavin biosynthesis protein RibF [Salinispora arenicola
           CNS-205]
          Length = 309

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPI 69
           + P      VV IG FDG+H GH   +  A+  A    +   V++F+PHP  +++  S  
Sbjct: 9   AAPGGWGRSVVTIGVFDGVHKGHQATIGHAVARAREIGVKSVVVTFDPHPAEVVRPGSHP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+ P+ + +++E +G   L    FT E +   AE F+  VLVE L    V+ G  FRF
Sbjct: 69  AVLTEPTRKAELIEALGVDVLCVLPFTPEFSRLPAEAFVHDVLVEHLHAALVVVGENFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G   AGD  +L++ G  +G+  V    L      + SS+ IR+ +  G V+ AA  LG  
Sbjct: 129 GHRAAGDVALLERLGRTFGY-AVEGAPLVAEAGTVFSSTYIRSCVAAGDVVAAARALGRP 187

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRF-RTQDQTSYSGVANFGRN 247
             +E  V+ G++ GR LGFPTAN+       +  +GVYA R  R   +       + G N
Sbjct: 188 HRLEGVVVRGDQRGRELGFPTANLLCHRYAAVPADGVYAARLVRRGQREPLMAAVSIGTN 247

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+        +E+++ DF  ++YG+R  + F  +LR ++++  +E L   + ED ++ R+
Sbjct: 248 PSF-SGRERRVEAYVLDFDADLYGERLALDFVAHLRGQVRYDSVEPLVAQIAEDVERTRQ 306

Query: 308 IL 309
            L
Sbjct: 307 AL 308


>gi|119476950|ref|ZP_01617231.1| hypothetical protein GP2143_10367 [marine gamma proteobacterium
           HTCC2143]
 gi|119449757|gb|EAW30994.1| hypothetical protein GP2143_10367 [marine gamma proteobacterium
           HTCC2143]
          Length = 310

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 149/300 (49%), Gaps = 5/300 (1%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT 71
           P H +G V  IG FDG+H GH  +L++ I        P TV+ F P P+           
Sbjct: 12  PRH-RGCVTTIGAFDGVHHGHRAVLQRLIDKGGEMGLPTTVVVFEPLPKEFFAPQQAPAR 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L     + K L+ +G   ++R +F          +F++KV VE L  K +I G   RFG+
Sbjct: 71  LMSFREKFKALKALGIDRILRIRFNESLREMDGGEFVRKVFVEGLGAKHIIIGDDLRFGR 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR G+  +L+K G + GF TV   E      + VSS+ IR AL       A  LLG  F+
Sbjct: 131 DRGGNFELLRKFGLEKGF-TVEATETLTMDDERVSSTRIRKALEDIDFDLANTLLGRPFS 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   VI G+++GR LG PTANM+L        GV+A+     D  +  G+AN G  PT+ 
Sbjct: 190 ISGKVIVGKQLGRQLGAPTANMELHRLRSPLSGVFAVD-AIIDAETVHGIANVGTRPTVG 248

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                +LE  + DF ++IYG+   V F   +R E KF  I+ LK  + ED +  R+   S
Sbjct: 249 DGLKAILEVHLLDFDRDIYGKNIEVIFRTKIRDEKKFDSIDNLKQQIHEDFETGRRYFAS 308


>gi|257125982|ref|YP_003164096.1| riboflavin biosynthesis protein RibF [Leptotrichia buccalis
           C-1013-b]
 gi|257049921|gb|ACV39105.1| riboflavin biosynthesis protein RibF [Leptotrichia buccalis
           C-1013-b]
          Length = 336

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 19/289 (6%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT----IIQSSSPIFTLS 73
            +V +GNFDGIH GH +ILE+A+K A   N    V +F+ +P+     I   S   + L+
Sbjct: 38  NIVILGNFDGIHKGHKIILEKAVKKAKEKNLKTIVYTFSEYPKNRQNKITTCSEKAYLLN 97

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              I    LE+             +  NYS E+F++KV+V  L    V  G  F FGK +
Sbjct: 98  ENKIDYLYLEEFE-----------KVRNYSPEEFVEKVIVNILNASEVYCGFNFTFGKKK 146

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G+  +L+K  ++        + + +  ++I+SS+ IR  +   +      LLG+   I 
Sbjct: 147 SGNVIMLEKLLKEKNIKLNIQEPVLDENNEIISSTRIRKYIENTNFTKVKELLGHNLIIL 206

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVP 252
             VI+G+++GR +GFPTAN++    +  + GVY ++   + D+  Y+GV N GRNPT V 
Sbjct: 207 GKVIYGKQLGRVIGFPTANLRFESKVYPEFGVYGVKIYIENDEKVYNGVMNIGRNPT-VD 265

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            G L +E+ IF+F+++IYG+   +   + +RPE KF  +E+LK  +G D
Sbjct: 266 IGVLSVETNIFNFNEDIYGKVILIEVLENIRPEKKFNSVEELKTQIGND 314


>gi|111023612|ref|YP_706584.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodococcus
           jostii RHA1]
 gi|226366101|ref|YP_002783884.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodococcus
           opacus B4]
 gi|110823142|gb|ABG98426.1| riboflavin kinase/ FAD synthetase [Rhodococcus jostii RHA1]
 gi|226244591|dbj|BAH54939.1| flavokinase/FAD synthetase [Rhodococcus opacus B4]
          Length = 336

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 19/315 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S   
Sbjct: 22  VPADWGRCVLTIGVFDGVHRGHAQLISRAVAAARTRGIPSVLMTFDPHPMEVVRPGSHPA 81

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++ E++G        FT E    + E++  ++LVE L V  V+ G  F FG
Sbjct: 82  QLTTLARRAELAEELGIDVFCVMPFTAEFMKLTPERYAHEILVERLHVADVVVGENFTFG 141

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K  AG+  +L++ G+++GF    +  L    +   SS+ IR+ +  G +  A   LG   
Sbjct: 142 KKAAGNVDLLRQIGDRFGFAVDGV-TLLAEHAVTFSSTYIRSCVDAGDMAAATEALGRPH 200

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRF----------RTQDQTS 237
            +E  V+HG+  GR LG+PTAN  ++P +   +  +GVYA  F                 
Sbjct: 201 RVEGVVVHGDGRGRQLGYPTAN--VAPPMYAAIPADGVYAAWFTVLGHGVDLGTVTSGER 258

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT        +E+F+ D   ++YGQ   V   + LR   KF  ++ L + 
Sbjct: 259 YMAAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDLVERLRGMEKFDSVDDLIVA 317

Query: 298 MGEDEKKARKILESS 312
           MG+D ++AR IL +S
Sbjct: 318 MGKDAERARAILAAS 332


>gi|237785719|ref|YP_002906424.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758631|gb|ACR17881.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 321

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 17/321 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++H ++   ++P  L   VV IG FDG+H GH  ++  A++ A   + P  +++F PH
Sbjct: 1   MDIWHGLD---NIPQSLDASVVTIGVFDGVHRGHRRLIGTAVRRARELDVPCVLMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L     ++ + E++G    +   FT   A  S  ++I++VLV  L  
Sbjct: 58  PVKVFAPERTPRLLGSLKDRQAMAEELGVDYFLTVDFTRSLAALSPTEYIEQVLVHQLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FG   AG    L+  G  YG   V I  L +     +SS+ IR+ L +GH
Sbjct: 118 RAIVVGENFTFGHKAAGTSQTLETEGPLYGC-DVDIVPLLSEDGHTISSTFIRSQLDQGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           V  AA  LG  +++  +V HG  + GR LG+PTAN+ +SP+  L  +GVYA  F      
Sbjct: 177 VDEAAWALGRPYSVYGEVEHGAGRGGRELGYPTANLYISPERALPADGVYAGWFTIDPGE 236

Query: 237 SYSGVANFG-RNPTMVPNG--PLL------LESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           +  G    G R PT +  G  P        +ESF+ D   ++YG   TV F DY+R    
Sbjct: 237 TVDGDMEPGVRYPTAISVGMNPTFNDDRRSVESFVLDRHADLYGLYATVEFIDYVRGMET 296

Query: 288 FKDIEKLKIYMGEDEKKARKI 308
           F  +++L   M  D    R +
Sbjct: 297 FSGVDELLAAMHRDVDAVRAM 317


>gi|302865978|ref|YP_003834615.1| riboflavin biosynthesis protein RibF [Micromonospora aurantiaca
           ATCC 27029]
 gi|315502538|ref|YP_004081425.1| riboflavin biosynthesis protein ribf [Micromonospora sp. L5]
 gi|302568837|gb|ADL45039.1| riboflavin biosynthesis protein RibF [Micromonospora aurantiaca
           ATCC 27029]
 gi|315409157|gb|ADU07274.1| riboflavin biosynthesis protein RibF [Micromonospora sp. L5]
          Length = 308

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 5/302 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           ++ P      VV IG FDG+H GH   +  A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   EAAPGGWGRSVVTIGVFDGVHRGHQATIGHAVARARELGVKSVVVTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+ P+ + +++E +G   L    FT+E +    E F+  VLV  L    V+ G  FR
Sbjct: 68  PAVLTEPARKAELIEALGVDVLCVVPFTVEFSRLPPEAFVHDVLVAHLHAALVVVGDNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD  +L++ G  +GF  V    L      + SS+ IR+ +  G V  AA  LG 
Sbjct: 128 FGHRAAGDVPLLERLGRTFGF-AVEGAPLVAEAGTVFSSTYIRSCVDAGDVGAAAAALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              +E  V+ G++ GR LG+PTAN+       +  +GVYA R   +D    +   + G N
Sbjct: 187 PHRVEGVVVRGDQRGRELGYPTANLLTHRYAAVPADGVYAARLVRRDGEPLAAAVSIGTN 246

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E++  DFS ++YG+R  + F  +LR +  +  IE L   + ED ++ R+
Sbjct: 247 PTF-SGRERRVEAYALDFSGDLYGERLALDFVAHLREQRTYDAIEPLVAQIAEDVERTRR 305

Query: 308 IL 309
            +
Sbjct: 306 AV 307


>gi|124026397|ref|YP_001015512.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL1A]
 gi|123961465|gb|ABM76248.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL1A]
          Length = 317

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 10/302 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           N  LP  L     A+G+FDG+HLGH  ++   +K     P TV+SF PHPR ++   S +
Sbjct: 20  NAKLPTAL-----ALGSFDGLHLGHKKVINAILKEPIGVP-TVVSFWPHPREVLFGESRL 73

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L  P+ +  +LE +G   L+   F    A+ SAE F+++VLV+ L  K +  G  FRF
Sbjct: 74  -RLDLPNEKTFLLEPLGIEQLVLVPFNKNLASKSAETFVEEVLVKTLHAKHIAVGENFRF 132

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++R GD   L+K G   G     +  + +N  ++ SSS +R AL  G + +A HLL   
Sbjct: 133 GRNREGDTSTLKKIGTSLGIKISIVPIVEDNHGRL-SSSRVRKALNDGDLKHAKHLLERP 191

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS-YSGVANFGRN 247
           +T    V  G  +G+ +G+PTAN+++     L   GVYA      ++   +  V N G  
Sbjct: 192 YTFSGTVEKGRGLGKKIGWPTANLKIDGRKFLPSLGVYAAWASIANKKERFLAVMNMGPQ 251

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+ PN    +E  + D    + G    +     +R + KF +IE L   +  D K A++
Sbjct: 252 PTIDPNSLSAVEVHLLDKEINLLGHELIIEPVQRIRLQKKFDNIESLSKQISSDAKLAKE 311

Query: 308 IL 309
           IL
Sbjct: 312 IL 313


>gi|259046775|ref|ZP_05737176.1| riboflavin biosynthesis protein RibF [Granulicatella adiacens ATCC
           49175]
 gi|259036543|gb|EEW37798.1| riboflavin biosynthesis protein RibF [Granulicatella adiacens ATCC
           49175]
          Length = 316

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 161/297 (54%), Gaps = 10/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+A+G FDGIHLGH  ++  A K+A      + V+SFN HP  I Q+  P  I  +SP  
Sbjct: 21  VLALGFFDGIHLGHKEVITTAKKVAEERGYKVAVMSFNQHPSVIFQNVDPDSIQYVSPIE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++++L+++G        FT E    S ++F+ + +V  L  K V+ G  + +GK    +
Sbjct: 81  RKKELLKELGVDIFYLVDFTKEFGALSPQEFVDQYIV-GLNAKVVVAGFDYTYGKRDVAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L K      F  + I E +++  +I SS+ +R  L +G +  A  LLGY + ++  V
Sbjct: 140 MELLPKYASNR-FEIISIPEQKSDNGKI-SSTAVRDLLLQGEIEKANELLGYDYIMDGVV 197

Query: 197 IHGEKIG-RTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG   G + LGFPTAN+++S D  LLK GVY +    + +    G+A+ G NPT     
Sbjct: 198 VHGFGRGSKMLGFPTANIEVSNDTFLLKNGVYIVEMFVEGKW-IPGMASIGINPTFDDVH 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +E  + DF ++IY     V +  YLRPE+KF+ I+ L   + +DE+  R   ++
Sbjct: 257 KVTIEVNLLDFDKDIYHLPVRVKWLKYLRPELKFEGIDALIAQLKKDEQDTRNYFKT 313


>gi|182435599|ref|YP_001823318.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776233|ref|ZP_08235498.1| riboflavin biosynthesis protein RibF [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464115|dbj|BAG18635.1| putative riboflavin kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656566|gb|EGE41412.1| riboflavin biosynthesis protein RibF [Streptomyces cf. griseus
           XylebKG-1]
          Length = 318

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 8/312 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  A++   FT E +  S   FI KVLV+ L  K VI G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDAVLILPFTAEFSKLSPADFIAKVLVDRLHAKAVIEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G  Y +    ID     ++   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA       ++  + + + 
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEVAGESMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    I     ++YG    V F  Y+R   KF  I+ L + M  D K+
Sbjct: 247 GTNPQFDAVERTVEAYAIGRVDLDLYGLHVAVDFLAYVRGMRKFDSIDDLLVAMAADVKR 306

Query: 305 ARKILESSYPLS 316
           + + L ++Y L+
Sbjct: 307 SSE-LTAAYDLT 317


>gi|25028427|ref|NP_738481.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium efficiens YS-314]
 gi|259507485|ref|ZP_05750385.1| riboflavin biosynthesis protein RibF [Corynebacterium efficiens
           YS-314]
 gi|23493712|dbj|BAC18681.1| riboflavin kinase/FMN adenylyltransferase [Corynebacterium
           efficiens YS-314]
 gi|259164973|gb|EEW49527.1| riboflavin biosynthesis protein RibF [Corynebacterium efficiens
           YS-314]
          Length = 341

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 24/321 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P  L+G VV IG FDG+H GH  ++ +A + A     P  +++F+PHP ++      
Sbjct: 8   KEVPADLEGSVVTIGVFDGVHRGHQTLMREASRQARELGVPCVMVTFDPHPISVFLPGRQ 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   +  +  + G  A++   FT E A  S E++ + ++V+ L  ++V+ G  F 
Sbjct: 68  PTRLAPLDYRITLAAEQGVEAVLIIDFTRELAGLSPEEYFRVMIVDALRARSVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG D AG    +++ G ++    + I  L ++    + S+ +R  L +G V  A   LG 
Sbjct: 128 FGTDGAGTEATMRELGAQHDVD-ITIMPLLHDDDLCICSTLVREFLVEGDVARANWALGR 186

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--------- 237
           R+++  +V+ G  + G+ LG+PTAN+ L   + L  +GVYA  F   D  +         
Sbjct: 187 RYSVRGEVVRGAGRGGKELGYPTANLYLPESVALPADGVYAGWFTITDDRAIDREISRDI 246

Query: 238 ---------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                    Y    + G NPT   +    +E+F+ D   ++YG    V F D LRP +KF
Sbjct: 247 DGDMVPGVRYPTAVSVGTNPTF-GDERRSVEAFVLDREADLYGHHVMVEFVDRLRPMVKF 305

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E+L   M  D  + R+IL
Sbjct: 306 HGVEELLEAMANDVTQTREIL 326


>gi|330818071|ref|YP_004361776.1| Riboflavin kinase/FAD synthetase [Burkholderia gladioli BSR3]
 gi|327370464|gb|AEA61820.1| Riboflavin kinase/FAD synthetase [Burkholderia gladioli BSR3]
          Length = 330

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    AN + E F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQAPEAFVEQTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + +I G  F +G  RAG+   LQ+ G ++GF    +  L       +SSS +R +L  G
Sbjct: 116 TRWMIVGDDFCYGARRAGNFASLQEAGARHGFDVEQMATLAAPNGARISSSGVRASLAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG+ + I   V HG K+GR LGFPT N+ ++       G++ +      +  
Sbjct: 176 DLDAAKQALGHGYAISGHVAHGLKLGRDLGFPTLNLSIAHKRPALSGIFVVLVHGLGEKP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VA+ G  PT+V  G +LLE  I D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPAVASLGVRPTVVDAGRVLLEVHILDWHGDAYGKLVRVEFLKKLRDEAKFIDLETLTRA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|153869798|ref|ZP_01999324.1| Riboflavin biosynthesis protein ribF [Beggiatoa sp. PS]
 gi|152073737|gb|EDN70677.1| Riboflavin biosynthesis protein ribF [Beggiatoa sp. PS]
          Length = 299

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+HLGH  +L Q    A     P  V+ F P P+     ++    L+   
Sbjct: 2   GCVATIGNFDGVHLGHQAVLLQLATRAKALQWPTVVIIFEPQPQEFFTPNNVPARLT--R 59

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  +   G   ++R +F  + A+  A  FI+++L++ L +K ++ G  FRFG+ R 
Sbjct: 60  LREKLIAMRHYGVERVLRLRFDTQFASLPASDFIEQILIKGLNIKHLVIGDDFRFGQKRQ 119

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L + G K+ F TV   +      + VSS+ +R AL +G + NA  LLG  +T+  
Sbjct: 120 GTFTTLVEAGRKWDF-TVENQQTFMLGKERVSSTRVREALMQGDLQNAKALLGRPYTLWG 178

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            + +G ++GR +GFPTAN+ L   +    GV+A+      +   +GVAN G  PT V   
Sbjct: 179 RIRYGRQMGRQIGFPTANIFLHRPVSPLRGVFAVLVHGLKKEPLTGVANLGTRPT-VDGH 237

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LLE  +F+F + IYG    V F   +R E +F   E LK  +  D + A+ +  ++
Sbjct: 238 QFLLEIHLFNFDKTIYGHDVEVEFVKKIRDEQRFASFEALKQQIMLDVQTAKAVFANN 295


>gi|88607389|ref|YP_505701.1| riboflavin biosynthesis protein RibF [Anaplasma phagocytophilum HZ]
 gi|88598452|gb|ABD43922.1| riboflavin biosynthesis protein RibF [Anaplasma phagocytophilum HZ]
          Length = 318

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 140/276 (50%), Gaps = 4/276 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  GNFDG+H GH  +  + +++A  +N     L+F+PH    ++     F LS    +
Sbjct: 29  VLTFGNFDGVHRGHMHVFSEVVRLAQEHNLASAALTFSPHTAVFLKKREN-FLLSDFERK 87

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++E      L   +F    A    E FI+ +LV+  + + V+ G    FG    G+  
Sbjct: 88  VQLIESCDIDYLHVVEFDELFAKMLPEAFIENILVQRCKARHVVVGEDCVFGYRCMGNID 147

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+   + YG+  + +D L  +  +I SSS+IR  +  G +  A  LLG    I   V+ 
Sbjct: 148 TLRSYSQSYGYKVMVVDHLSISGKKICSSSSIRKCVESGDIQAANLLLGRCHAISGKVMR 207

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G   GRT+GFPT N+ L   I+   GVY  R     Q    G+AN G  PT       +L
Sbjct: 208 GRARGRTIGFPTLNLSLEHTIMPCRGVYNARVLI-GQEWLLGIANIGVRPTFSEVELPIL 266

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           E  IFDF ++IYG++ TV   D++RPE KF+ IE+L
Sbjct: 267 EMHIFDFDEDIYGRKVTVELLDFIRPEQKFQSIEQL 302


>gi|228954085|ref|ZP_04116114.1| FMN adenylyltransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229071307|ref|ZP_04204530.1| FMN adenylyltransferase [Bacillus cereus F65185]
 gi|229081064|ref|ZP_04213574.1| FMN adenylyltransferase [Bacillus cereus Rock4-2]
 gi|228702108|gb|EEL54584.1| FMN adenylyltransferase [Bacillus cereus Rock4-2]
 gi|228711761|gb|EEL63713.1| FMN adenylyltransferase [Bacillus cereus F65185]
 gi|228805651|gb|EEM52241.1| FMN adenylyltransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 335

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 171/311 (54%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA++      V++F+PHP  ++ +  + +  ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHPSVVLGKKDAHVEYITPMRD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 208 VIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHGEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++     Y
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVEQIAKDKKTAQE-----Y 321

Query: 314 PLSERDRIICF 324
            +SE++ I+ F
Sbjct: 322 FVSEKN-ILAF 331


>gi|81428852|ref|YP_395852.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610494|emb|CAI55545.1| Bifunctional enzyme, riboflavin kinase and FMN adenylyltransferase
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 317

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 9/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS--SSPIFTLSPPS 76
           V+A+G FDG+H  H  +++ A ++A   N P+ V++F+ HP  + ++   +    LS   
Sbjct: 21  VLALGFFDGVHRAHQAVIKTAKELAVQQNRPLAVMTFDIHPAIVYRNVNQADFRYLSTVE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +++++  +G   L    F    A  + + F+ + LV  L  KTV+ G  + +GK    +
Sbjct: 81  RKQELMADLGVDILYVVHFNDGFAKLAPQDFVDQYLVA-LHAKTVVAGFDYTYGKKDIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L     K  F  V + E  + +   + S+ IR  L +G V  A  LL Y +    +V
Sbjct: 140 MQTLSTYA-KDRFEIVTVAE-HDYQGHKIGSTLIRENLDQGQVAAANELLSYVYQTTGEV 197

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE  GR LGFPTAN++   P+ L   G+YA+R   + Q  Y G+A+ GRN T   N P
Sbjct: 198 VHGEARGRELGFPTANIESQKPERLPGIGIYAVRLLVRGQW-YWGMASIGRNVTFHANNP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + +E  + DFS +IYG++  V ++ YLR E+KF   E L   + +DE   R   E
Sbjct: 257 VTVEINLLDFSADIYGEQVKVEWYQYLRGEVKFDSAEALIDQLHQDEADTRTYFE 311


>gi|116620958|ref|YP_823114.1| FMN adenylyltransferase/riboflavin kinase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224120|gb|ABJ82829.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 322

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 156/326 (47%), Gaps = 7/326 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V+ ++     +P       V IGNFDG+H GH  IL +   IA+      TVL+F+PH
Sbjct: 1   MQVYRSL---AEIPRDFGPSAVTIGNFDGVHFGHRQILRRVKAIADEHGWKATVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        L+ P  +  ++ + G   ++   FT E A    E+F++++LVE +  
Sbjct: 58  PTRIVAPDRTPPLLTSPEARATLMAEEGIENVLILPFTPELALLMPEEFVRRLLVEAMGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AG+  +L   G++ GF T  +  + + + ++VSSS IR  +  G+
Sbjct: 118 RAVLVGDNFRFGHKAAGNVAVLADLGKRMGFTTEVVPAI-SCRGRMVSSSGIREMIRAGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-S 237
           V  AA  L + + +E  V+ G  +G     PT N+    +++   GVY    R  D    
Sbjct: 177 VSLAARFLLHPYGMEGQVVSGRGVGSKQTVPTLNLATPAEVIPASGVYITYTRDLDAARE 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + N G  PT   +  L +E+F+ D  +     R  V F   +R E KF   E L+  
Sbjct: 237 WRSITNVGYRPTFGASDQLTIETFLLDALEGETPARIRVEFLRRVREERKFDTPESLRAQ 296

Query: 298 MGEDEKKARKILESSYPLSERDRIIC 323
           + +D + A+         + R+ I C
Sbjct: 297 ILKDVRTAQNYFRRVKAWTGRECISC 322


>gi|325201520|gb|ADY96974.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240149]
 gi|325207499|gb|ADZ02951.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           NZ-05/33]
          Length = 306

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQSSS--- 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    S +   
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFASRTGRV 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCIDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|83589902|ref|YP_429911.1| riboflavin kinase / FMN adenylyltransferase [Moorella thermoacetica
           ATCC 39073]
 gi|83572816|gb|ABC19368.1| riboflavin kinase / FMN adenylyltransferase [Moorella thermoacetica
           ATCC 39073]
          Length = 320

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 16/324 (4%)

Query: 7   IEINQSLPNH--LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           +++ Q LP    + G  +A+GNFDG+H GH  ++   ++ +        V++F PHP  +
Sbjct: 1   MQVWQGLPAERAMNGCNLALGNFDGVHRGHQHLIGSVVQKSRSGGGEGVVITFVPHPARV 60

Query: 63  IQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++ S P + T +   I+  ++ ++G   L    FT   A    E F++++L        V
Sbjct: 61  LEGSPPGLLTTTKRKIE--LIGQLGIDHLFLLPFTPSLAALEPEAFVREILWAHFHPSLV 118

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  F FG   AG   +L++ GE+ GF    +  +   +   VSS+ IR AL  G +  
Sbjct: 119 AVGFNFTFGHRGAGTPALLRRLGEELGFKVEVMGPV-TLRGLTVSSTAIRNALENGDIGL 177

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAI--RFRTQDQTSY 238
           A  LLGY   +   V+ G++ GR LGFPTAN+ + P++ L   GVYA    FR +    +
Sbjct: 178 ARDLLGYWPVLAGRVVAGDQRGRQLGFPTANLAVPPELKLPAYGVYACLASFRGRK---W 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V N GR PT     P  +E+ + DFS  +Y +   + F  +LR E KF    +LK  M
Sbjct: 235 QAVVNIGRRPTFGSALPATIEAHLLDFSGNLYNEEMELEFRAFLRQERKFASPGELKAQM 294

Query: 299 GEDEKKARKILESSY--PLSERDR 320
             D ++AR IL       L +RDR
Sbjct: 295 EADREQARNILGGHRFSILEQRDR 318


>gi|304413764|ref|ZP_07395208.1| bifunctional flavokinase and FAD synthetase [Candidatus Regiella
           insecticola LSR1]
 gi|304283855|gb|EFL92249.1| bifunctional flavokinase and FAD synthetase [Candidatus Regiella
           insecticola LSR1]
          Length = 401

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 161/340 (47%), Gaps = 50/340 (14%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLS 73
           H  G V+ IGNFDG+HLGH  +L Q         +P+ V+ F P P  +         L+
Sbjct: 60  HHYGCVLTIGNFDGVHLGHKALLRQLKHEGQRLKAPVMVMIFEPQPLELFAPEKAPTRLT 119

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + K L ++G   L+  +FTL  A  +A +FI ++LV+ L++K +  G  F FG DR
Sbjct: 120 RLRDKIKYLAQIGVDYLLCVRFTLPFATLTAHEFITQLLVKKLKIKFLTVGDDFHFGSDR 179

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +LQ+ G ++GF  V      N+ S+I SS+ IR AL    ++ A  LLG+ ++I 
Sbjct: 180 LGDIKLLQQAGTEFGFDVVNTGSFCNSGSRI-SSTAIRQALQNDDLVLAEDLLGHPYSIT 238

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI------------------------- 228
             VIHG+++GRTLGFPTAN+ L       +GVYA+                         
Sbjct: 239 GRVIHGDELGRTLGFPTANISLKRLAAPVKGVYAVDVYGLSSIPTVLQVAASRPGRETDE 298

Query: 229 --------RFRTQDQTSYS-------------GVANFGRNPTMVPNGPLLLESFIFDFSQ 267
                     R+Q + S+              GVAN G  PT V      LE  IF  ++
Sbjct: 299 RRQLRDSANVRSQQRGSFEGEGYTGSDDKPLRGVANIGTRPT-VAGSRQQLEVHIFAITK 357

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           ++YG    +   + LR E  F  ++ L+  +  D   A+K
Sbjct: 358 DLYGCHIEIVLREKLRNERCFVSLDTLRQQIASDVLMAKK 397


>gi|76811383|ref|YP_332536.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 1710b]
 gi|126440536|ref|YP_001058019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 668]
 gi|134281261|ref|ZP_01767970.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           305]
 gi|217419434|ref|ZP_03450940.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           576]
 gi|226194374|ref|ZP_03789972.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811170|ref|YP_002895621.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           MSHR346]
 gi|238562664|ref|ZP_00440046.2| riboflavin biosynthesis protein RibF [Burkholderia mallei GB8 horse
           4]
 gi|251766705|ref|ZP_04819769.1| riboflavin biosynthesis protein RibF [Burkholderia mallei PRL-20]
 gi|254175788|ref|ZP_04882448.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           10399]
 gi|254190883|ref|ZP_04897390.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196365|ref|ZP_04902789.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           S13]
 gi|254202508|ref|ZP_04908871.1| riboflavin biosynthesis protein RibF [Burkholderia mallei FMH]
 gi|254207843|ref|ZP_04914193.1| riboflavin biosynthesis protein RibF [Burkholderia mallei JHU]
 gi|254260432|ref|ZP_04951486.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710a]
 gi|254356262|ref|ZP_04972538.1| riboflavin biosynthesis protein RibF [Burkholderia mallei
           2002721280]
 gi|76580836|gb|ABA50311.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710b]
 gi|126220029|gb|ABN83535.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           668]
 gi|134247567|gb|EBA47652.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           305]
 gi|147746755|gb|EDK53832.1| riboflavin biosynthesis protein RibF [Burkholderia mallei FMH]
 gi|147751737|gb|EDK58804.1| riboflavin biosynthesis protein RibF [Burkholderia mallei JHU]
 gi|148025259|gb|EDK83413.1| riboflavin biosynthesis protein RibF [Burkholderia mallei
           2002721280]
 gi|157938558|gb|EDO94228.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696832|gb|EDP86802.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           10399]
 gi|169653108|gb|EDS85801.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           S13]
 gi|217396738|gb|EEC36754.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           576]
 gi|225933459|gb|EEH29448.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505679|gb|ACQ97997.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           MSHR346]
 gi|238522163|gb|EEP85609.1| riboflavin biosynthesis protein RibF [Burkholderia mallei GB8 horse
           4]
 gi|243064981|gb|EES47167.1| riboflavin biosynthesis protein RibF [Burkholderia mallei PRL-20]
 gi|254219121|gb|EET08505.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710a]
          Length = 345

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 76  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLH 130

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G
Sbjct: 131 TRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAG 190

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 191 DLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEP 250

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 251 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRA 310

Query: 298 MGED 301
           + +D
Sbjct: 311 IAQD 314


>gi|198274010|ref|ZP_03206542.1| hypothetical protein BACPLE_00146 [Bacteroides plebeius DSM 17135]
 gi|198273088|gb|EDY97357.1| hypothetical protein BACPLE_00146 [Bacteroides plebeius DSM 17135]
          Length = 310

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 163/298 (54%), Gaps = 14/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +LEQ   IA    I   +++F  HPR ++ +S     L+  S +
Sbjct: 16  VATIGCFDGVHRGHQYLLEQVHNIAKAEGIASCLITFANHPRQVLDTSFRPRLLTCLSQK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +  E+      +   FT E +  SA +F+ KVL E  +V+T+  G    FG  +  D G
Sbjct: 76  IERFEQSPIEYCVLLPFTKELSLLSAREFM-KVLHEEYQVQTLFVGYDHHFGHSK--DEG 132

Query: 139 ILQ--KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +  + G+++G   +    L  +    VSS+ IR+ L +G +  A   LGY + +   V
Sbjct: 133 FQEYCQYGKEFGMRVMQSKALTEDGVS-VSSTLIRSCLCEGKIELANSYLGYHYYLTGRV 191

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           + G K+GRTLGFPTAN+Q L  D LL   GVYA+ +       Y G+ N G  PT V +G
Sbjct: 192 VDGRKVGRTLGFPTANIQPLCADKLLPASGVYAV-YVYLGGKRYEGMLNIGSCPT-VHDG 249

Query: 255 --PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              + +E  I DF ++IY +   V F DY+RPE+KF+++E+L + + +D+  A+K+L+
Sbjct: 250 DKSITVEVHILDFEKDIYQETIKVEFIDYIRPEVKFENVEELTLQLQKDKIVAKKLLD 307


>gi|325133569|gb|EGC56231.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M13399]
 gi|325143836|gb|EGC66152.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240013]
 gi|325206750|gb|ADZ02203.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M04-240196]
          Length = 306

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    S    +
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFASRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPDHRYALGGVFVVDADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|225570601|ref|ZP_03779626.1| hypothetical protein CLOHYLEM_06703 [Clostridium hylemonae DSM
           15053]
 gi|225160614|gb|EEG73233.1| hypothetical protein CLOHYLEM_06703 [Clostridium hylemonae DSM
           15053]
          Length = 309

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 153/295 (51%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +G FDG+HLGH  + +   +      I   V +F+       +  S    ++    +
Sbjct: 17  AVTLGKFDGLHLGHKKLTDMVKEYGRQDDIKSIVCAFDMSVLWEKKGISREVLMTKDERK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + E++    L+   FT E +   AE+FI+ V+        V+ GT FRFG  + GD  
Sbjct: 77  NHLEEEV--DCLVDCPFTEEFSRMEAEEFIENVICNIFRAAYVVVGTDFRFGHGKRGDIH 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ    KY +  + I++ R  +  I+SS+ I+  L +G++     LLGY + ++  V H
Sbjct: 135 MLQAYARKYDYELIVIEKERR-EGHIISSTYIKQILKEGNMPFVCELLGYPYGLQGVVEH 193

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+K+GR LGFPT N+  + + ++   GVY  R +  D   Y G+AN G  PT+     LL
Sbjct: 194 GKKLGRRLGFPTFNVAPAREKVMPPNGVYLNRVQV-DGVWYDGIANIGVKPTVSDEERLL 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +ES++FD+S + YG+   +   ++ RPE KF D+E++K  +  D    R+  E +
Sbjct: 253 VESYLFDYSGDAYGKEVQIELLEFCRPEQKFADVEEMKKCVAGDIAFGRQYFEMA 307


>gi|256822882|ref|YP_003146845.1| riboflavin biosynthesis protein RibF [Kangiella koreensis DSM
           16069]
 gi|256796421|gb|ACV27077.1| riboflavin biosynthesis protein RibF [Kangiella koreensis DSM
           16069]
          Length = 313

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 7/306 (2%)

Query: 12  SLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           S P +L  +G V  IGNFDG+HLGH  I+++    A   + P  V+ F PHP+   +  +
Sbjct: 9   SCPPNLFAQGSVATIGNFDGVHLGHQAIIKRLTVKAEALSVPSVVIVFEPHPQEFFRPDA 68

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L   + +   L+ +G   ++  +F  E A  SAE FI++VLVE L VK +  G  F
Sbjct: 69  APARLFKLTDKLLALKDLGVDYVLCLRFNQELAELSAEDFIRRVLVETLRVKHLFIGDDF 128

Query: 128 RFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           +FG  R GD  +L + G      +   + E+     +I SSS +R A+          LL
Sbjct: 129 KFGYQRQGDFALLNQAGHFPVEANQTVVQEVDGGDVRI-SSSLVRQAIADSDFTRTEKLL 187

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  +     V HG+K GRT+G PTAN+ L       +GVYA++       + +GVAN G+
Sbjct: 188 GRPYRFSGRVAHGDKQGRTIGIPTANIALKRLKSPLQGVYAVKVLGIGNKAINGVANVGK 247

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT+       LE  +FDF  ++YGQ  T+     +R E KF   ++L   +  D +KAR
Sbjct: 248 KPTLNERKE-RLEIHLFDFEGDVYGQHLTIEPITKIRDEQKFNGKDELIEQINRDIEKAR 306

Query: 307 KILESS 312
            +  + 
Sbjct: 307 ALFNNQ 312


>gi|104774201|ref|YP_619181.1| riboflavin kinase / FAD synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423282|emb|CAI98117.1| Riboflavin kinase / FAD synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 312

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 165/311 (53%), Gaps = 13/311 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+PP  +   + K+G   L+  KFT E ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNPPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPSFAKGRFDIKVVPKQIFAGEK---IGSAEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D + Y  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-SWYQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L   +  
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSEQLKL 298

Query: 301 DEKKARKILES 311
           D+  ++    S
Sbjct: 299 DQVASKNYFSS 309


>gi|229086361|ref|ZP_04218538.1| FMN adenylyltransferase [Bacillus cereus Rock3-44]
 gi|228696973|gb|EEL49781.1| FMN adenylyltransferase [Bacillus cereus Rock3-44]
          Length = 323

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P S+
Sbjct: 21  VMALGFFDGIHLGHQRVIRTAKKIADERGYKSAVITFHPHPSVVLGKKEAHVEYITPLSM 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK++  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKVIADLGIDVLYVVKFDESFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+E  
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVEGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ L  + LL   GVYA+R +  D+  + GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVALREEYLLPPVGVYAVRLKVHDEW-HDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F F+++IY Q  TV +   +R E KF  I++L   + +D++ A++   ++
Sbjct: 255 RKLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDELVAQIAKDKQTAQEYFSTA 313


>gi|90022212|ref|YP_528039.1| riboflavin kinase / FMN adenylyltransferase [Saccharophagus
           degradans 2-40]
 gi|89951812|gb|ABD81827.1| riboflavin kinase / FMN adenylyltransferase [Saccharophagus
           degradans 2-40]
          Length = 325

 Score =  152 bits (383), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 7/301 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG+FDG+HLGH  +L+Q +  A +   P  V+ F P P       +    L   
Sbjct: 25  KACVVTIGSFDGVHLGHQQLLQQVVAQAAHLQLPSVVIVFEPQPHEFFSKENAPARLMRL 84

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G   ++  +F  +  N +A  F+++VLV+ L VK ++ G  F+FG DR+G
Sbjct: 85  REKVQALFAAGVDKVLCLRFNQQLRNLTANDFVEQVLVKGLGVKYLVVGDDFKFGCDRSG 144

Query: 136 DRGILQKRGEKYGFHTVF----IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           D   LQ++GEK+GF  V     +    ++ +  +SS+ IR  L       AA LLG  F+
Sbjct: 145 DFAALQQQGEKHGFSVVDTQTQLATTEHDGTDRISSTRIRALLETDKFDQAAALLGAPFS 204

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           +   V++G+++GRTLGFPTAN+ L        GVY +     DQ  Y+ VAN G  PT+ 
Sbjct: 205 VAGRVVYGKQLGRTLGFPTANIGLGRYRSPVNGVYGVVLIANDQ-RYNAVANVGVRPTLG 263

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                +LE      +  +YG+   V F   +R E+KF  ++ LK  + +D   A++  +S
Sbjct: 264 GRNKPILEVHALTPTGNLYGEFVRVEFKFKIRQEMKFTSLDALKNQIADDVSTAKRYFQS 323

Query: 312 S 312
           +
Sbjct: 324 N 324


>gi|282861446|ref|ZP_06270511.1| riboflavin biosynthesis protein RibF [Streptomyces sp. ACTE]
 gi|282564104|gb|EFB69641.1| riboflavin biosynthesis protein RibF [Streptomyces sp. ACTE]
          Length = 317

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 161/318 (50%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F PH
Sbjct: 1   MQCWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPAVVVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+P   + +++  +G  A++   FT + +  +   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGTHPPLLAPHRRRAELMADLGVDAVLILPFTTDFSKLAPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALT 175
           + VI G  FRFG   AGD  +L + G  Y +    ID   + ++   +  SS+  R  + 
Sbjct: 118 QLVIEGPNFRFGYRAAGDVTLLAELGATYDYQVEVIDLFVSGEAGGGEPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD 234
            G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA  + T +
Sbjct: 178 DGDVEGAAEILGRPHRVEGTVVRGAQRGRALGFPTANVETLPHSAIPADGVYA-GWLTVE 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R  +KF  ++ 
Sbjct: 237 GEAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMLKFDSVDD 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D K++ +++E+
Sbjct: 296 LLVAMAADVKRSSELIEA 313


>gi|315500472|ref|YP_004089275.1| riboflavin biosynthesis protein ribf [Asticcacaulis excentricus CB
           48]
 gi|315418484|gb|ADU15124.1| riboflavin biosynthesis protein RibF [Asticcacaulis excentricus CB
           48]
          Length = 329

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 11/296 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT--IIQSSSPI--FTL 72
           G   AIG+FDG+H GH  ++E AI  A    +   V+ F+PHP+   + ++  P+  F L
Sbjct: 33  GACAAIGSFDGVHCGHQRVVENAIAAARRLGAASAVVCFDPHPQAFFLTRAGKPVTPFRL 92

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                Q +   ++G   +   +F    +  +AE F Q +L + L++  +  G  FR+G  
Sbjct: 93  MTLDQQVRAFSELGVEYVFVLRFDETLSALTAEAFTQNILHDHLKLSHISCGFDFRYGAK 152

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    L + G   GF T       +     +SSS +R AL  G    A H+LG     
Sbjct: 153 GVGSAQTLCEAGASMGFTTAVTPCQTDETGHKLSSSAVREALEAGDAQLAGHVLGRPQAF 212

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V  G++IGR +GFPTAN++L   +  K GVY  R R  +      V NFG+ PT+  
Sbjct: 213 AGVVTRGDQIGRQIGFPTANIELGDYLRPKYGVYVTRTRLSNGEVLGSVTNFGKRPTV-- 270

Query: 253 NGPL--LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            G L    E+ IF    +IY Q   V    YLRPE KF   + LK  + +D + A+
Sbjct: 271 -GGLNERFETHIFGLDHDIYDQVIEVELLHYLRPEQKFPSFDALKGQITKDAEAAK 325


>gi|255326380|ref|ZP_05367464.1| riboflavin biosynthesis protein RibF [Rothia mucilaginosa ATCC
           25296]
 gi|255296597|gb|EET75930.1| riboflavin biosynthesis protein RibF [Rothia mucilaginosa ATCC
           25296]
          Length = 338

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 9/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  ++ + + +A    ++   +SF+PHP  + +  +    +     +
Sbjct: 18  VVTIGNFDGVHRGHARVISRVVSLAEEHGLSSIAVSFDPHPMQVHRPEAAHHDIMGQGSR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +  +G +  +   + LE A  + E+F++   V+ L  + V+ G   RFGK+ +GD  
Sbjct: 78  RYFMCLLGLNDYLLLNYNLEFAAQTPEEFVKSTFVDALNARFVVIGDDVRFGKNNSGDLN 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            +++ GEKYGF  V +++L  +++   SS+ IR  L +G +  A  LLG    +  +V+H
Sbjct: 138 TMRELGEKYGFEVVVVEDLMVDENTRCSSTRIRQLLLEGDMPAATELLGRHHMMAGEVVH 197

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   GR LGFPTAN++L    L+  +GVYA     +    +    + G NPT        
Sbjct: 198 GLARGRELGFPTANLELEARGLIPADGVYAGWLVDESGNRHPSAISVGTNPTFDGIEHRQ 257

Query: 258 LESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E+ + D  +E      +YGQR  + F   LRP + +  +E L   + +D  + R++L
Sbjct: 258 VEAHVIDRPEERVEDFNLYGQRVLIEFVKRLRPMVAYTGVEALIEQINDDVVQTREVL 315


>gi|309378323|emb|CBX23069.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 306

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    S    +
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFASRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGVFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIAADMEA 302

Query: 305 ARK 307
           AR+
Sbjct: 303 ARR 305


>gi|327441007|dbj|BAK17372.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 316

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 161/293 (54%), Gaps = 16/293 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII-QSSSPIFTLSPPSIQ 78
           +AIG FDG+H GH  ++E A + A   NS   V++F+PHP  ++ + +  +F ++P S +
Sbjct: 23  LAIGFFDGVHKGHQAVIEVAKQKAEQLNSKSAVMTFDPHPSIVLGRRNEKVFYITPLSQK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
               +K+    +    FT + A  + E+FI+  +V+ L V+ V  G  F FG    G+  
Sbjct: 83  IDTFKKLNIDTVFVVNFTSDFAKLTPEEFIKYFIVD-LNVQHVTAGFDFSFGAYGKGNME 141

Query: 139 IL-QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           ++ Q    KYG   V + E + ++ + +SS+ IR AL  G +  A +LLG  F +   V+
Sbjct: 142 LMDQLSNGKYG---VTVIEKQQDEVEKISSTRIRKALQDGDMEQARNLLGRAFEVPGIVV 198

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP- 255
           HG+K GRT+GFPTAN+Q      +   GVYA++   Q++  Y GV N G  PT   N P 
Sbjct: 199 HGDKRGRTMGFPTANVQAMEGCYIPATGVYAVKISVQNKW-YDGVCNVGYKPTF--NNPD 255

Query: 256 ---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
              L +E  I +F++ IYG+   V ++  +R E KF  IE L   +  D+++A
Sbjct: 256 EKQLSIEVHILNFNKNIYGEEVVVGWYKRIRSERKFNGIEALIEQIELDKQQA 308


>gi|225164873|ref|ZP_03727094.1| riboflavin biosynthesis protein RibF [Opitutaceae bacterium TAV2]
 gi|224800522|gb|EEG18897.1| riboflavin biosynthesis protein RibF [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 28/310 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AIG FDG+HLGH  ++E A+  A  S  T  VL+F PHP  + +  +P+  +  P+++ 
Sbjct: 27  LAIGMFDGVHLGHQAVIEAAVHSARRSGGTAAVLTFWPHPSRLFRPDAPVRMIMTPALKA 86

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L ++G   +I   F    A   A +F+  +      ++T+  G  +RFG+ R GD   
Sbjct: 87  RLLAQLGVDVIISQTFDAAYAQTPASEFLPLLKRHLPALRTIYVGENWRFGRGREGDISY 146

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L       G  +VF  E  N+  + +SS+ IR  L  G +  A  LLGY +  E  ++ G
Sbjct: 147 LINEARPLGL-SVFSAERINHNGEPISSTRIRAHLETGGIEEANTLLGYSYFAEGVIMPG 205

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS-------------------- 239
           +++GRT+GFPT N+   PD+L + GVYA+R         +                    
Sbjct: 206 KQLGRTIGFPTLNVDWQPDLLPRLGVYAVRVTAGTSPGLTSAPPPSPPPPPAAAAPAAPS 265

Query: 240 --GVANFGRNPTMVPNG--PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              VAN+G  PT V N   P L    + D      G   TV +  +LRPE +F ++  L+
Sbjct: 266 FPAVANYGLRPT-VENATRPRLEIHLLGDRCPFDAGDFVTVEWLTFLRPEQRFPNLPALR 324

Query: 296 IYMGEDEKKA 305
             +  D + A
Sbjct: 325 AQLAADRQSA 334


>gi|330718224|ref|ZP_08312824.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc fallax
           KCTC 3537]
          Length = 319

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 156/295 (52%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDGIHLGH  +L+QA   A+    P  +L++ PHP  + Q    P+  L+P S 
Sbjct: 22  VVAMGFFDGIHLGHQAVLQQAKSEADALGIPSAILTYAPHPAVVFQKFDQPMQYLTPLSE 81

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGD 136
           + ++L+++G   +    FT + A    + F+  VL+  L   TV+ G    +G K+   D
Sbjct: 82  KLRLLQEIGIDYMYVMNFTSQLARVKPQAFVDDVLMR-LNPVTVVAGFDHLYGPKNSQAD 140

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +   F+T+ ++++ ++ ++ V S  IR  L  GHV  A   LG  +     V
Sbjct: 141 MQHLSSYAQNR-FNTIVVNKV-DHDTEKVGSRQIRHLLNNGHVDEANQQLGRIYETAGLV 198

Query: 197 IHGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           +HGE  GR LGFPTAN+     QL P I    G+YA+         Y G+A+ GRN T  
Sbjct: 199 VHGEARGRELGFPTANIETTIQQLVPGI----GIYAVEILVAGYWRY-GMASIGRNVTFG 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              P+ +E  I DF++EIYG+   V +  YLR E+KF ++E L   + +DE   R
Sbjct: 254 AKRPITIEINILDFNEEIYGEFVRVRWHHYLRGEVKFDNVETLIQQLQQDEIVTR 308


>gi|240112171|ref|ZP_04726661.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae MS11]
          Length = 306

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAARTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|89895259|ref|YP_518746.1| FAD synthase [Desulfitobacterium hafniense Y51]
 gi|89334707|dbj|BAE84302.1| FAD synthase [Desulfitobacterium hafniense Y51]
          Length = 318

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 166/311 (53%), Gaps = 7/311 (2%)

Query: 7   IEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII 63
           ++I Q LP+      V+A+GNFDG+HLGH  +L+  ++ A    +   VL F PHP  ++
Sbjct: 1   MQIIQELPSDPGHQCVLALGNFDGVHLGHQRLLKSGLEQAAQKGVDLAVLLFEPHPLKLL 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                +  L+    Q ++  ++G   +    FT E A+ S E F++ +LV+ L V  ++ 
Sbjct: 61  FPERVLGFLTTQKEQMRLFSEIGVDRVYLVPFTKEMADTSPEGFVRDILVK-LGVIHIVV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG    G    LQ+ G+ YGF  V + + +  + +++SS+ +R AL  G  + A 
Sbjct: 120 GFNYSFGALGKGTAEDLQRYGQDYGF-GVSVLQPQTFEGKVISSTAVRKALLNGDAVQAK 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVA 242
            LLG  + +   V+ GE+ G  LG+PTAN+++  ++++ K GVYA+    + +  + G+ 
Sbjct: 179 KLLGRTYKLVGTVVEGERRGHDLGYPTANLRIYEELIIPKRGVYAVWAEIEGRLVH-GMM 237

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      L +E   FDFS ++YG    +   + +R E KF   ++LK  +  D 
Sbjct: 238 NIGMKPTFHEEYALTVEIHFFDFSGDLYGMELAICCEEKIRDERKFNGFDELKGQLERDA 297

Query: 303 KKARKILESSY 313
            K +++LE  +
Sbjct: 298 LKTKQVLEEIF 308


>gi|218960609|ref|YP_001740384.1| Riboflavin biosynthesis protein [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729266|emb|CAO80177.1| Riboflavin biosynthesis protein [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Candidatus
           Cloacamonas acidaminovorans]
          Length = 311

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 157/297 (52%), Gaps = 6/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG FDG+HLGH  +L++ ++IA    +   V+S+  HP  ++++      L P 
Sbjct: 13  KKSVLTIGTFDGLHLGHQKVLKKVVEIAMAEGLQSVVISYQDHPAFVLKTHPMPKMLCPA 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I+ + ++KMG   +    FTLE A     +F++  ++   + K ++ G    FG  R G
Sbjct: 73  EIKLQEMKKMGIERIELLDFTLELAKTPPLKFLKDYIIPLFQPKVIVMGYDSHFGHLRQG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L +  E+ G+   +++ L   + + +SSS+IR  L  G +  A +LLG  + +   
Sbjct: 133 NYDFLCRHSEELGYRVEYVEPLL-FEGKPISSSSIRNLLLSGKIEAANYLLGRPYRLIGK 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V H    GR LGFPTAN+  L P  L+ K G+Y  +   Q+   + G+ N G +PT+   
Sbjct: 192 VGHSNSKGRKLGFPTANLNLLCPHQLIPKSGIYLSKVIWQENV-FFGLTNIGCSPTVKNT 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G + +E+ I DF   +YGQ   +    YLR E  FK++++LK  +  D   AR +L+
Sbjct: 251 GVIEIETHILDFQDNLYGQIMELDLLSYLREEKMFKNVDELKTAIQNDIALARVMLK 307


>gi|228998585|ref|ZP_04158172.1| FMN adenylyltransferase [Bacillus mycoides Rock3-17]
 gi|228761053|gb|EEM10012.1| FMN adenylyltransferase [Bacillus mycoides Rock3-17]
          Length = 335

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  I
Sbjct: 33  VMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPHPSVVLGKKEAHVEYITPLRI 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK++  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGTM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+E  
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVEGM 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  + GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANIALSEEYLLPPVGVYAVRLKVHGEW-HDGVCNIGYKPTFKDDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F F+++IY Q  TV +   +R E KF  I+KL   + +D+K A++   ++
Sbjct: 267 RNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDKLVAQIAKDKKTAQEYFSTT 325


>gi|331698428|ref|YP_004334667.1| riboflavin biosynthesis protein RibF [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953117|gb|AEA26814.1| riboflavin biosynthesis protein RibF [Pseudonocardia dioxanivorans
           CB1190]
          Length = 308

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 6/302 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           +++P      VV IG FDG+H GH  ++ +A+ +      P  +++F+PHP  +++  S 
Sbjct: 8   EAVPTGWGRSVVTIGIFDGVHRGHQKLIGRAVDLGRGLGLPTVLVTFDPHPAELVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + +++  +G  A     FT E +  +  +F+  +LV+ L    V+ G  F 
Sbjct: 68  PARLTSLARRSELVADLGVDAFCVLPFTAELSRRTPAEFVHDILVDRLHAAVVVVGDNFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG    GD  +L + G ++GF +V    L +     +SS+ +R  +  G V  AA +LG 
Sbjct: 128 FGYRAEGDVTMLAELGRRFGF-SVEGYGLVSEADVTLSSTFVRACIDAGDVETAAAVLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              I+  V+HG++ GR LG+PTAN+   P   L  +GVYA RF    +   + + + G N
Sbjct: 187 PHRIDGVVVHGDQRGRDLGYPTANVAAPPYTALPADGVYAGRFLHAGRALPAAI-SVGTN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+++ D  ++ YG   +V F   LR   KF  IE L   MG D ++ R+
Sbjct: 246 PTF-SGRERTVEAYVLDVEEDFYGHEVSVEFVHRLRGMEKFDSIEALVEQMGRDVEQTRE 304

Query: 308 IL 309
           +L
Sbjct: 305 LL 306


>gi|255658260|ref|ZP_05403669.1| riboflavin biosynthesis protein RibF [Mitsuokella multacida DSM
           20544]
 gi|260849571|gb|EEX69578.1| riboflavin biosynthesis protein RibF [Mitsuokella multacida DSM
           20544]
          Length = 312

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 160/297 (53%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  I+ +A+++A+    T  V +F+ HP  ++   +    +S  +++
Sbjct: 18  VIALGMFDGVHRGHRSIISRAVELAHEIGGTSMVFTFSNHPLAVLAPQAVPPQISNNALR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++E +G   L+   FT + A  + E F+  +L +    + ++TG  + FG    G   
Sbjct: 78  RQLIEALGVDVLMAIPFTKDLARRTPEDFL-ALLRDSFAPRILVTGPNYTFGSRGKGTHR 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ G  YGF       ++    + VSS+ IR  +  G +  A   LG  FT+   VIH
Sbjct: 137 LLQRVGSDYGFRAEICPAVQLG-GRPVSSTRIRALIAGGDLAAAEACLGRPFTVLDRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G++ GRTLGFPTAN+ + PD  ++L  GVYA     + +  Y+ +AN G NPT       
Sbjct: 196 GDRRGRTLGFPTANLAI-PDAQVMLPNGVYAATAHYEGR-DYAALANIGNNPTF-EGCNR 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +E  I DFS++IY +   V F   +R E KF  ++ L   M +D ++A++I  + +
Sbjct: 253 RIEVNIQDFSEDIYDRLLEVRFLQKIREEEKFASVDALIAQMHKDRERAKEIWRNCF 309


>gi|315444936|ref|YP_004077815.1| riboflavin kinase ;FMN adenylyltransferase [Mycobacterium sp.
           Spyr1]
 gi|315263239|gb|ADT99980.1| riboflavin kinase ;FMN adenylyltransferase [Mycobacterium sp.
           Spyr1]
          Length = 324

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 21/320 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
              +P      VV IG FDG+H GH  ++ +A+K   +   P  +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVVTIGVFDGVHRGHQELIGRAVKAGRSRGVPTVLMTFDPHPMEVVFPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E+MG    +   FT +    + E+++ ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVERLHVVEVVVGDNF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG+  +L+K G+++GF       + E   +++   SS+ IR+ +  G ++ A  
Sbjct: 127 TFGKKAAGNVELLRKAGDRFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAGDMVAAEE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ------ 235
            LG    +E  V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 187 ALGRPHRVEGVVVRGDGRGRDLGFPTAN--VAPPMYAAIPADGVYAAWFTVLGHGPVVGT 244

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D   ++YGQ   V F   LR + KF  +
Sbjct: 245 VTPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTEADLYGQHVAVDFVARLRGQEKFGSV 303

Query: 292 EKLKIYMGEDEKKARKILES 311
             L   M  D ++AR IL +
Sbjct: 304 ADLITAMEGDTERARTILSA 323


>gi|229006084|ref|ZP_04163772.1| FMN adenylyltransferase [Bacillus mycoides Rock1-4]
 gi|228755160|gb|EEM04517.1| FMN adenylyltransferase [Bacillus mycoides Rock1-4]
          Length = 335

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  I
Sbjct: 33  VMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPHPSVVLGKKEAHVEYITPLRI 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK++  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGTM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+E  
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVEGM 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  + GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVALSEEYLLPPVGVYAVRLKVHGEW-HDGVCNIGYKPTFKDDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F F+++IY Q  TV +   +R E KF  I+KL   + +D+K A++   ++
Sbjct: 267 RNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDKLVAQIAKDKKTAQEYFSTT 325


>gi|149917191|ref|ZP_01905691.1| riboflavin biosynthesis protein RibF [Plesiocystis pacifica SIR-1]
 gi|149822107|gb|EDM81500.1| riboflavin biosynthesis protein RibF [Plesiocystis pacifica SIR-1]
          Length = 358

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 145/288 (50%), Gaps = 17/288 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V +G FDG+H GH  ++ +A  +A    + V++F P P  ++        L  P+ + +
Sbjct: 29  AVCLGTFDGMHRGHQGLIARARSLAGR--VAVVTFEPRPADVLAPGKAAPRLQTPAQRVR 86

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +  ++G   L+  +F    +  S + F+Q  L++ L    VI G  FRFG  RAG    L
Sbjct: 87  VCRELGVDELVMLRFDPSVSTMSPQAFVQAFLLDGLAPAAVIVGYDFRFGARRAGGPEEL 146

Query: 141 QKRGEKYGFHTVFIDELRNN---KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           +   E  G     ++++        + + S+ IR  +++G V  AA +LG  + +E +V+
Sbjct: 147 RALLEPAGVRVSVVEKIEGRGELAGEKLGSTAIRRYVSEGQVERAARVLGRLYAVEGEVV 206

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-----QDQTSYSGVANFGRNPTMV- 251
           HG+  GR LGFPTAN+  +  +L   GVYA  F T         S++ VAN G NPT   
Sbjct: 207 HGDARGRGLGFPTANVAAA-SLLPSSGVYAC-FLTDLSDGDAGDSWAAVANLGTNPTFTG 264

Query: 252 --PNGPLLLE--SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              + PL LE  +   D    +YG+R  V+F DY+R E +F   + L+
Sbjct: 265 AREDAPLRLEVHALDVDLGARLYGRRVEVAFVDYIRGEQRFDGPQALR 312


>gi|154485026|ref|ZP_02027474.1| hypothetical protein EUBVEN_02744 [Eubacterium ventriosum ATCC
           27560]
 gi|149733979|gb|EDM50098.1| hypothetical protein EUBVEN_02744 [Eubacterium ventriosum ATCC
           27560]
          Length = 306

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 159/297 (53%), Gaps = 10/297 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  +V IG FDGIH GH  +LE  +  AN     VL+F   P   + +++   T+    
Sbjct: 12  LKNTIVTIGKFDGIHKGHEKLLEVIVNNANGRQKVVLTFETTPSAFLNNNAN-KTIVTEE 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++ + E+ G    ++     E    S ++F+ K+L + +   T++ G  F FG   +G+
Sbjct: 71  EKQILCEQQGVDVYMKMPMKKEFLALSPDEFVSKILKDKIGATTIVCGPDFHFGTKASGN 130

Query: 137 RGILQKRGEKYGFHTVFID-ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              L+   +KYG++ + ++ E  +NK   +SS++IR  +T+G + +   +LG+ + I   
Sbjct: 131 VKFLKDNQKKYGYNLIVVEKEQYHNKD--ISSTSIRKKITEGKMQDVNEMLGHPYRIIGK 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           V  G+ +GRT+G PTAN  + PD   +L   GVY      + QT ++ ++N G NPT+  
Sbjct: 189 VEQGKHLGRTIGLPTAN--IIPDETKLLPPNGVYRTVVVVEGQT-FNAISNVGVNPTVET 245

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              + +E+ I D+   IY +   V F+D++RPE  F  +EKLK  +  D +  R+I+
Sbjct: 246 GTKIKVETHIIDYENYIYNEIVQVQFYDFIRPERTFDSLEKLKQQIEADIETCRRIV 302


>gi|53718548|ref|YP_107534.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei K96243]
 gi|53726230|ref|YP_103805.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei ATCC 23344]
 gi|121601307|ref|YP_993954.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei SAVP1]
 gi|124383434|ref|YP_001027019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei NCTC 10229]
 gi|126449156|ref|YP_001081642.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei NCTC 10247]
 gi|126452288|ref|YP_001065253.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|167718455|ref|ZP_02401691.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei DM98]
 gi|167737505|ref|ZP_02410279.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 14]
 gi|167814623|ref|ZP_02446303.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 91]
 gi|167823093|ref|ZP_02454564.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 9]
 gi|167844654|ref|ZP_02470162.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei B7210]
 gi|167893186|ref|ZP_02480588.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 7894]
 gi|167909888|ref|ZP_02496979.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 112]
 gi|167917911|ref|ZP_02505002.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei BCC215]
 gi|242316168|ref|ZP_04815184.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106b]
 gi|52208962|emb|CAH34901.1| putative riboflavin biosynthesis protein [Burkholderia pseudomallei
           K96243]
 gi|52429653|gb|AAU50246.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           23344]
 gi|121230117|gb|ABM52635.1| riboflavin biosynthesis protein RibF [Burkholderia mallei SAVP1]
 gi|124291454|gb|ABN00723.1| riboflavin biosynthesis protein RibF [Burkholderia mallei NCTC
           10229]
 gi|126225930|gb|ABN89470.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106a]
 gi|126242026|gb|ABO05119.1| riboflavin biosynthesis protein RibF [Burkholderia mallei NCTC
           10247]
 gi|242139407|gb|EES25809.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106b]
          Length = 330

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|313669054|ref|YP_004049338.1| riboflavin kinase/FMN adenylyltransferase [Neisseria lactamica
           ST-640]
 gi|313006516|emb|CBN87980.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           lactamica 020-06]
          Length = 306

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    S    +
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFASRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTIDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 ARK 307
           AR+
Sbjct: 303 ARR 305


>gi|268598228|ref|ZP_06132395.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268582359|gb|EEZ47035.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           MS11]
          Length = 319

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAARTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|240114917|ref|ZP_04728979.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID18]
 gi|260441268|ref|ZP_05795084.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
          Length = 306

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAARTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|46446392|ref|YP_007757.1| putative riboflavin kinase/FMN adenylyltransferase [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400033|emb|CAF23482.1| putative riboflavin kinase/FMN adenylyltransferase [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 313

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 154/283 (54%), Gaps = 5/283 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+HLGH  +L+  QAI   +++ ITVL+F+ HP  +++   P   L     +
Sbjct: 18  ILTIGNFDGVHLGHLFVLQRVQAIAKQSDAEITVLTFSNHPSEVLRPQDPAKLLCTLPHK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+LE    + L    FT   A +SA  F++++  +++    +I G     G+DR G+R 
Sbjct: 78  IKLLESNHVNHLFLIPFTNYLAKHSAASFVERIR-QFIPFSHLILGHDATLGRDRQGNRL 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++Q   E +GF   ++DE R  +   VSS++IR  + +G +     LLG  ++I S +  
Sbjct: 137 VMQTLAEMWGFEVHYLDEYRY-EGLAVSSTSIRKLVQEGDLKKVHALLGRPYSIYSTISS 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G   GR +G+PTAN+++    L   GVYA+  + + Q    G+AN G  PT+  N   LL
Sbjct: 196 GLGKGRQMGYPTANIEVQNLCLPPFGVYAVEIK-KGQEILPGIANLGFAPTIRQNNIPLL 254

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E  I     E       V F  Y+RPE KF++IE+L+  + +D
Sbjct: 255 EVHILTGQTEFSEDPIEVIFQHYIRPEKKFENIEQLRSQIRQD 297


>gi|294339968|emb|CAZ88331.1| putative bifunctional RibF: riboflavin kinase (Flavokinase); FMN
           adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase) [Thiomonas sp. 3As]
          Length = 323

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 161/333 (48%), Gaps = 22/333 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M+VF  I  ++SL +      + IGNFDG+H GH  +L Q +++A +  +  TVL+F PH
Sbjct: 1   MYVFRGIH-HKSLASQT---ALTIGNFDGVHRGHLAMLHQLVQVARSRGLVPTVLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR    +       +P    ++++K+  L + G   ++  +F    A  S E+F+ +++ 
Sbjct: 57  PRDFFATLQGHPDSAPSHISTLRDKLCALREAGVQQVVVLRFDPRIAALSPEEFVVQIVW 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKR-----GEKYGFHTVFIDELRNNKSQIVSSS 168
           + L+ + V+ G  FRFG  RAGD   L        GE      V    LR      +SSS
Sbjct: 117 QGLKAQFVLVGDDFRFGARRAGDFAQLDTLMRNLGGEARQMPVVTETALR------ISSS 170

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            +R AL  G +     LLG  + I   V+HG K+GR LGFPT N++         GV+  
Sbjct: 171 AVRQALQAGDMETTQVLLGRPYAISGHVLHGAKLGRKLGFPTLNLRFDRARPALGGVFVA 230

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           R    +      VA+ G  P +  +G +LLE+ +FD+  E YG+   V     LR E  +
Sbjct: 231 RVHGLELAPLPAVASLGTRPAVETDGRVLLETHVFDWHGEAYGKLIRVELLHKLRDEAHY 290

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
            D+ +L   +  D  +AR         + RDRI
Sbjct: 291 PDLTQLIAAIQNDSDQARAWFAQLARQTTRDRI 323


>gi|29829088|ref|NP_823722.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces avermitilis MA-4680]
 gi|29606194|dbj|BAC70257.1| putative riboflavin kinase [Streptomyces avermitilis MA-4680]
          Length = 317

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 9/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVERARELGVPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  AL+   FT E +  S  +F+ KVLV+ L  + V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDALLILPFTTEFSRLSPAEFVVKVLVDKLHARAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L ++G+ Y F    +D     ++      SS+  R  + +G V  A  +
Sbjct: 128 FGHKAAGNVEFLAEQGKTYDFEVELVDLYVTGEAGGGTPFSSTLTRRLIAEGDVEGAREI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D+   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHVGDEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  ++R + KF  I+ L   M  D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQAKFDSIDALLETMAVDVK 305

Query: 304 KARKILES 311
           + R+++ +
Sbjct: 306 RCRELIAA 313


>gi|283781606|ref|YP_003372361.1| riboflavin biosynthesis protein RibF [Pirellula staleyi DSM 6068]
 gi|283440059|gb|ADB18501.1| riboflavin biosynthesis protein RibF [Pirellula staleyi DSM 6068]
          Length = 310

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 5/301 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + LP  L  G V IGNFDG+H GH  +LE+    A     P  V +F+PHP  +++ S  
Sbjct: 8   RDLPESLLHGAVTIGNFDGVHRGHAALLERLKAQAERVGGPAIVFTFDPHPVRLLRPSET 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++L  +G SA+I Y   L   + +A +F + +L + L  + V+ G  F 
Sbjct: 68  PPPLTWTDRKAELLFDLGVSAVISYPTDLALLSLTAGEFFESILRQTLAARAVVEGPNFY 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G+   L K  E  G  T  + E       IVSSS +R  +  G+V  A+ LL  
Sbjct: 128 FGKGREGNVHTLAKLCESAGM-TFEVVEPTIEAGAIVSSSRVRQLIVDGNVGEASQLLTR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + I   V HG + G  +GFPTAN+     +L K GVYA R  T  Q +++   N G NP
Sbjct: 187 PYRIRGMVTHGAQRGSKIGFPTANVDAIDTLLPKLGVYAARAIT-SQGTFAAALNLGPNP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +    +E+ +  FS  +YGQ   + F  +LR    F  I+ LK  +  D    + I
Sbjct: 246 TFGEHA-TKVEAHLLGFSGSLYGQPIELDFLAHLRDIRPFASIDALKQQLALDVAATQAI 304

Query: 309 L 309
           +
Sbjct: 305 V 305


>gi|319409843|emb|CBY90152.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase
           (flavokinase) and FMN adenylyltransferase (FAD
           pyrophosphorylase; FAD synthetase) [Neisseria
           meningitidis WUE 2594]
          Length = 318

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+     +   +
Sbjct: 23  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAALAGKT 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D + 
Sbjct: 255 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|240013383|ref|ZP_04720296.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI18]
 gi|240120454|ref|ZP_04733416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID24-1]
          Length = 306

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAARTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|296111959|ref|YP_003622341.1| riboflavin biosynthesis protein RibF [Leuconostoc kimchii IMSNU
           11154]
 gi|295833491|gb|ADG41372.1| riboflavin biosynthesis protein RibF [Leuconostoc kimchii IMSNU
           11154]
          Length = 314

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 160/296 (54%), Gaps = 9/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  ++E+A   A+    P+ VL+++P+P  + ++   P+  L+P + 
Sbjct: 21  VVAMGFFDGVHRGHQAVIERAKSEADKLGVPLAVLTYDPYPAVVFRALEKPLRYLTPLAQ 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ +L K+G   +   +FT E A    +QF+  VL+  L    V+ G    +G + +   
Sbjct: 81  KKILLTKLGVDKIYVMQFTSELAKVEPQQFVDDVLM-CLNPILVVGGFDHLYGGNSSTAD 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +      +  F  + + E  +N  +I  SS IR AL  G +      LG  +     V+
Sbjct: 140 MMHLPFYAQQRFDVIVVPEFDDNHKKI-GSSAIRRALDIGDMNQVNQQLGRIYQTTGLVV 198

Query: 198 HGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HGE  GR LGFPT N++ +P++  L   G+YA++ +  D   Y G+A+ GRN T     P
Sbjct: 199 HGEARGRKLGFPTINIK-TPELEWLPGIGIYAVKVKVGDDW-YEGMASIGRNITFGDERP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E  I DF +EIYG+  TV+++ YLR E+KF  +  L + +  DE + R+  ++
Sbjct: 257 VTVEINILDFQREIYGENVTVTWYTYLRGEVKFSTVSDLIVQLNSDEYQTRQYFDT 312


>gi|269795636|ref|YP_003315091.1| FMN adenylyltransferase /riboflavin kinase [Sanguibacter keddieii
           DSM 10542]
 gi|269097821|gb|ACZ22257.1| FMN adenylyltransferase /riboflavin kinase [Sanguibacter keddieii
           DSM 10542]
          Length = 329

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 170/329 (51%), Gaps = 21/329 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITV-LSFNPH 58
           M ++ +++    +P  +   VV IGNFDG+H GH  +L + + + A    ++V ++F+PH
Sbjct: 1   MQLWTDLD---QIPAGVGPSVVTIGNFDGVHAGHVEVLGRLVQRAAELEAVSVAITFDPH 57

Query: 59  PRTI--IQSSSPIFTLSPPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           P  +     + P+ T     +Q+++L  E+ G  A++   ++L  A  + E+F+ + +V+
Sbjct: 58  PAQVHRPDEAPPLIT----GLQDRLLLLEETGIDAVLVLPYSLALAGLTPEEFVSRYIVD 113

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L    V  G   RFG   +G    +   GE+YGF    I ++ +  +   SSS +R  L
Sbjct: 114 ALGAVCVAVGRDVRFGLGNSGSLETMVSLGERYGFVVDVIQDVGDGPAPRWSSSAVRELL 173

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFR-- 231
             G V  AA +LG    +  +V+HG+  GR LGFPTAN+ Q +  I+  +GVYA   R  
Sbjct: 174 LAGDVAGAAQILGRPHRLRGEVVHGDARGRDLGFPTANLSQDAQGIVPADGVYAGWVRRP 233

Query: 232 -TQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKF 288
            + D T      + G NPT   +G    +E+++ D +  ++YG+   V   + LRP ++F
Sbjct: 234 TSADPTPLPAAISIGTNPTF--DGLQRRVEAYVLDRTDLDLYGEEILVELVERLRPTLRF 291

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSE 317
             ++ L   M  D  +AR IL    P ++
Sbjct: 292 DGLDALVEQMTADVVQARDILLPVAPATD 320


>gi|229162745|ref|ZP_04290702.1| FMN adenylyltransferase [Bacillus cereus R309803]
 gi|228620627|gb|EEK77496.1| FMN adenylyltransferase [Bacillus cereus R309803]
          Length = 335

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 161/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   +++ L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVENLGIDILYVVKFDESFAGLLPQQFVDDYIID-LNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|296185345|ref|ZP_06853755.1| riboflavin biosynthesis protein RibF [Clostridium carboxidivorans
           P7]
 gi|296050179|gb|EFG89603.1| riboflavin biosynthesis protein RibF [Clostridium carboxidivorans
           P7]
          Length = 312

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 157/290 (54%), Gaps = 8/290 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDGIH+GH  ++ + IK+A  N +   + +F  HP ++I        +   S + 
Sbjct: 18  IALGSFDGIHIGHVSLVNKTIKLARKNQAKSMIFTFKNHPLSVINKEIAPKIIMDNSNKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++LE  G  A+    F  E    S E FI   LV     K ++ G   RFG    GD  +
Sbjct: 78  EVLESFGLDAINMANFDKELMMLSPEDFILN-LVSHYRAKGIVVGFNNRFGYKNLGDVEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT-KGHVLNAAHLLGYRFTIESDVIH 198
           L+K  +KY F    +D ++  K+Q+VSSS IR  ++ +G +   + +L   F ++ +V+ 
Sbjct: 137 LKKLSKKYSFDLCVVDPVKY-KAQVVSSSVIRNVISDEGDMKKVSKMLTRPFMLQGNVVK 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GRTLGFPT N+      +L + GVY    + +D+  + G+ N G NPT V +  L 
Sbjct: 196 GKQLGRTLGFPTVNLNYDKRFVLPRGGVYYTVVKYEDKF-FRGITNVGYNPT-VEDNKLS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E+ I DFS+ IY +   + F D +R E KF  ++ L   + +D+  A+K
Sbjct: 254 VETHILDFSENIYNKHIKIYFMDRIRDEKKFDSVQFLAEQLKKDKIYAKK 303


>gi|111225114|ref|YP_715908.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia
           alni ACN14a]
 gi|111152646|emb|CAJ64387.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Frankia alni
           ACN14a]
          Length = 309

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 6/301 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++ P   +GGVV IG FDG+HLGH  I+ QA+  A        VL+F+PHP  +++  S 
Sbjct: 8   ENTPAEWRGGVVTIGFFDGVHLGHRQIIGQAVARARERGERAVVLTFDPHPGEVLRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++L  +G  AL    FTL+ +     +F+  +LVE L  + V+ G  F 
Sbjct: 68  PALLTTLRHKAELLAAIGVDALCVQPFTLDFSRLPPPEFVHGMLVEQLGARVVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G   AG    L   G + GF    +  +R+   +++SS+ IR  + +G V +AA  L  
Sbjct: 128 YGHRAAGTLATLAADGAREGFEVDGVRLVRSG-DRVLSSTEIRRRVAEGDVESAAAALAR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           R  +E  V+HG+  GRT+G+PTAN++++P   +  +GVYA  F   D        + G N
Sbjct: 187 RHRVEGVVVHGDARGRTIGYPTANVEVTPWAAVPADGVYA-GFACWDGHRQPAAISIGTN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+F+ DF  ++YG+     F   LRP ++F+ +++L   M  D +  R 
Sbjct: 246 PTFAGR-ERRVEAFLLDFDGDLYGEYMAYEFTSRLRPTLRFESVDELVTQMAADVEATRT 304

Query: 308 I 308
           +
Sbjct: 305 V 305


>gi|325003062|ref|ZP_08124174.1| riboflavin biosynthesis protein RibF [Pseudonocardia sp. P1]
          Length = 329

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 157/306 (51%), Gaps = 8/306 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           +++P      VV +G FDG+H GH  ++ +A+++A +   P  V++F+PHP  +++  + 
Sbjct: 8   EAVPPGWGRCVVTVGVFDGVHRGHRQLIARAVELARDRGLPAVVVTFDPHPAELVRPGTH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              LS    + +++ + G        FT + +  +   F  ++LV+ L    V+ G  F 
Sbjct: 68  PARLSTLDRRAELVAEAGADVFCVIPFTEQLSRMAPAGFAHEILVDRLHAAVVVVGRNFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD   L + G ++GF    +D L ++     SS+ IR+ +  G V +AA  LG 
Sbjct: 128 FGHKAAGDVTTLHELGRRFGFVCEAVD-LISDDHITFSSTYIRSCIDAGAVRDAARALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
              ++  ++HG K GR LGFPTAN+   P   +  +GVYA  FR  D+   S + + G N
Sbjct: 187 WHRVDGVIVHGHKRGRDLGFPTANVACPPHTAVPADGVYAGWFRIGDRRLKSAI-SVGTN 245

Query: 248 PTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT   +G +  +E+++ D  ++ YG    V F   LR +  +  IE L   M  D + +R
Sbjct: 246 PTF--SGRVRTVEAYVLDVDEDFYGHEVGVEFVARLRGQEHYDGIEPLIAQMTRDVEDSR 303

Query: 307 KILESS 312
             L ++
Sbjct: 304 TTLVAA 309


>gi|304388368|ref|ZP_07370479.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis ATCC
           13091]
 gi|304337634|gb|EFM03792.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis ATCC
           13091]
          Length = 306

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+     +   +
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAALAGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPDHRYALGGVFVVDADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 ARK 307
           AR+
Sbjct: 303 ARR 305


>gi|59802563|gb|AAX07518.1| riboflavin kinase [Gemmata sp. Wa1-1]
          Length = 317

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFT 71
           P    G  V +GNFDG+H GH  ++  A + A +   P+ V++F+P P  ++   S    
Sbjct: 13  PREFTGAAVTVGNFDGVHRGHQALVAAARRHAESVRGPVVVVTFDPPPHQVLHPGSERPP 72

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + + ++L  +G   ++  + +      S E F + V+V  L  K ++ G  FRFG+
Sbjct: 73  LTTIAQRSELLHAIGADHVVVLRTSPALLALSPEAFFEDVIVRQLGAKALVEGYDFRFGR 132

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            RAG    L+      G     I +      + VSSS +R AL  G V  AA LL   + 
Sbjct: 133 GRAGTNETLKALCADAGLEFTAIPQYAVG-GEPVSSSRVRAALVNGDVSRAAELLNRPYR 191

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+ G K GRT+GFPTAN+     +L   GV+A+R    D  ++   AN G NPT  
Sbjct: 192 ITGTVVTGAKRGRTIGFPTANLDNVLTVLPGNGVFAVR-AIVDGAAHQAAANIGPNPTFG 250

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +    +E  + DF+ ++YG+  +V F   LR    FK + +L   + +D  +A+++L +
Sbjct: 251 EDA-RKIEVHLIDFAGDLYGKEMSVEFVARLRETKPFKGVSELIEQLKQDVIRAQEVLST 309


>gi|283458500|ref|YP_003363127.1| FAD synthase [Rothia mucilaginosa DY-18]
 gi|283134542|dbj|BAI65307.1| FAD synthase [Rothia mucilaginosa DY-18]
          Length = 338

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 155/298 (52%), Gaps = 9/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  ++ + + +A    ++   +SF+PHP  + +  +    +     +
Sbjct: 18  VVTIGNFDGVHRGHARVISRVVSLAEEHGLSSIAVSFDPHPMQVHRPEATHHDIMGQGSR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +  +G +  +   + L+ A+ + E+F++   V+ L  + V+ G   RFGK+ +GD  
Sbjct: 78  RYFMCLLGLNDYLLLNYNLQFASQTPEEFVKSTFVDALNARFVVIGDDVRFGKNNSGDLN 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            +++ GEKYGF  V +++L  +++   SS+ IR  L +G +  A  LLG    +  +V+H
Sbjct: 138 TMRELGEKYGFEVVVVEDLMVDENTRCSSTRIRQLLLEGDMPAATELLGRHHMMAGEVVH 197

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   GR LGFPTAN++L    L+  +GVYA     +    +    + G NPT        
Sbjct: 198 GLARGRELGFPTANLELEARGLIPADGVYAGWLVDESGNRHPSAISVGTNPTFDGIEHRQ 257

Query: 258 LESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E+ + D  +E      +YGQR  + F   LRP + +  +E L   + +D  + R++L
Sbjct: 258 VEAHVIDRPEERVEDFNLYGQRVLIEFVKRLRPMVAYTGVEALIEQINDDVVQTREVL 315


>gi|268600574|ref|ZP_06134741.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|291044615|ref|ZP_06570324.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
 gi|268584705|gb|EEZ49381.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|291011509|gb|EFE03505.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
          Length = 319

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFAARTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|113954373|ref|YP_730007.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9311]
 gi|113881724|gb|ABI46682.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9311]
          Length = 309

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 5/283 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +A+G+FDG+H GH  ++    +  +   I TV+SF PHPR ++    P   L  P  + +
Sbjct: 16  LALGSFDGLHAGHRRVISSVTETDHLHAIPTVVSFWPHPREVLHGE-PRLRLDLPEEKLE 74

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE +    L+   F  + A  SA  F+++VL+  L+ + +  G  FRFG+ R GD   L
Sbjct: 75  LLEPLSIQQLVLVPFNRQLAQLSAADFVEQVLLGCLKARQIAVGANFRFGRGRKGDTNTL 134

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   E  G     +  L + + ++ SSS IR AL+ G +  A+ LLG  +     V+ G 
Sbjct: 135 RALAEAAGVQVSVLPILEDAEGRM-SSSRIREALSNGDLQTASALLGRPYRFRGTVVRGR 193

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLLL 258
            +GR LG+PTAN+Q+     L   GVYA R  TQ D  +   V N G  PT+ PN P  +
Sbjct: 194 GLGRDLGWPTANLQVDGRKFLPGLGVYAARAWTQRDGEALPAVMNLGPQPTVDPNSPSAV 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E  + D   E+ GQ   V   + LR + +F  +++L   +G+D
Sbjct: 254 EVHLLDRRIELVGQELVVEPVERLRGQQRFSGLDELSAQIGQD 296


>gi|302554529|ref|ZP_07306871.1| riboflavin biosynthesis protein RibF [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472147|gb|EFL35240.1| riboflavin biosynthesis protein RibF [Streptomyces
           viridochromogenes DSM 40736]
          Length = 317

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 156/308 (50%), Gaps = 9/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVNRARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  A++   FT E +  S   F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAAHHRRAELMADLGVDAVLILPFTTEFSKLSPADFVVKVLVDKLHAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L  +G+ Y F    +D     ++   +  SS+  R  + +G V  A  +
Sbjct: 128 FGHKAAGNVEFLATQGKTYDFEVEVVDLYVTGEAGGGEPFSSTLTRRLVAEGDVEGAGEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHAQGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  ++R + KF+ ++ L   MG+D K
Sbjct: 247 GTNPQF-EGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQAKFETLDALLEQMGQDVK 305

Query: 304 KARKILES 311
           K R+++ +
Sbjct: 306 KCRELVAA 313


>gi|83719780|ref|YP_441327.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis E264]
 gi|83653605|gb|ABC37668.1| riboflavin biosynthesis protein RibF [Burkholderia thailandensis
           E264]
          Length = 345

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 76  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVERTLVHGLH 130

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++GF    ++ L +      SSS +R AL  G
Sbjct: 131 TRWIMVGDDFCYGAKRAGDFASLKAAGERFGFEVEQMETLADADGARFSSSGVRAALAAG 190

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 191 DLDAAARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGIGPEP 250

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 251 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRA 310

Query: 298 MGED 301
           + +D
Sbjct: 311 IAQD 314


>gi|160891486|ref|ZP_02072489.1| hypothetical protein BACUNI_03937 [Bacteroides uniformis ATCC 8492]
 gi|317478408|ref|ZP_07937571.1| riboflavin kinase [Bacteroides sp. 4_1_36]
 gi|156858893|gb|EDO52324.1| hypothetical protein BACUNI_03937 [Bacteroides uniformis ATCC 8492]
 gi|316905444|gb|EFV27235.1| riboflavin kinase [Bacteroides sp. 4_1_36]
          Length = 313

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++EQ   +A    +  +V++F  HPR ++Q+      L+    +
Sbjct: 16  VATIGFFDGVHRGHRYLIEQVCAVAAGRGLASSVVTFPVHPRKVMQADYHPKLLTTCDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L K G    +   FT E A  SA +F+  +L +  +++ ++ G   RFG +R+    
Sbjct: 76  VSLLAKTGVDYCMMLDFTPEIARLSAREFM-SILKDRYQIQALVVGYDHRFGHNRSEGFE 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQ-----IVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                G + G   +       +K        VSSS IR  L +G+V  AA  LGY F ++
Sbjct: 135 DYVHYGRELGMEVLLARAYSYSKETSVTEVTVSSSAIRGLLLEGNVSEAAEYLGYDFFLD 194

Query: 194 SDVIHGEKIGRTLGFPTANMQLS-PDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G ++GR +GFPTAN+++S PD L+  +GVYA+R   + +  Y G+ + G  PT+ 
Sbjct: 195 GTVVGGYQVGRKIGFPTANLRVSDPDKLIPCDGVYAVRVCVEGK-EYGGMLSIGYRPTL- 252

Query: 252 PNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            NGP   +E  IF F  +IY Q   +SF    RPE+KF  IE+L   +  DE + + IL
Sbjct: 253 ENGPDRSIEVHIFRFDADIYQQPMRLSFVRRTRPELKFDSIEELIAQLHRDEVEIKSIL 311


>gi|300813702|ref|ZP_07094022.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300512159|gb|EFK39339.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 302

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 159/293 (54%), Gaps = 8/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++A+GNFDG+H GH  +LE  +KIA    +   VL F  H   +  S +    L+  
Sbjct: 14  KNSIIALGNFDGVHKGHRKLLESTVKIAKEKKLKSAVLGFKSHSSNM-YSENKKKILTTN 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + KI   +G   +    F+ E  + S  +F++  L E L+VK ++ G  + F   +AG
Sbjct: 73  TSKFKIFSDLGIDIVYLIDFSKEFMSMSPMEFLKDFLQEKLKVKGLVVGYDYTFAYKKAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++    Y F+ + I E +  + Q +SSS IR  +++G +  A  LL   FT+   
Sbjct: 133 DVNYLKEHS--YLFNWLDIIEEQTWQGQAISSSLIRKLISEGKIKEANFLLDSNFTVMGK 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIH + +G+ +G+PTAN++L  + I+ + GVY       D   Y    + G NPT+  +G
Sbjct: 191 VIHNKGLGQKMGYPTANLELCDNYIIPRYGVYDTDIIV-DGKKYKAATSVGTNPTVEDDG 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            + +E+ I +F+  IYG+   + F D++RPE+ FK+I++L   +  D KK R+
Sbjct: 250 -IKIEAHILNFNDNIYGKTVELIFLDFIRPELVFKNIDELFKQINLDVKKVRE 301


>gi|239928605|ref|ZP_04685558.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces ghanaensis ATCC 14672]
 gi|291436931|ref|ZP_06576321.1| riboflavin kinase (FAD synthetase) [Streptomyces ghanaensis ATCC
           14672]
 gi|291339826|gb|EFE66782.1| riboflavin kinase (FAD synthetase) [Streptomyces ghanaensis ATCC
           14672]
          Length = 317

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 9/309 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  A++   FT E +  SA  F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDAVLILPFTTEFSKLSAADFVVKVLVDKLHAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG    L ++G  Y F    +D     ++   +  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGTVDFLTEQGRIYDFAVEVVDLYVTGEAGGGEPFSSTLTRRLVAEGDVDGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHAQGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  ++R + +F  +E L   M  D +
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQARFDTLEALMEQMARDVE 305

Query: 304 KARKILESS 312
           + ++++ ++
Sbjct: 306 RCKELVAAA 314


>gi|116495051|ref|YP_806785.1| FAD synthase [Lactobacillus casei ATCC 334]
 gi|191638554|ref|YP_001987720.1| Bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus casei BL23]
 gi|227534938|ref|ZP_03964987.1| FAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|116105201|gb|ABJ70343.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus casei
           ATCC 334]
 gi|190712856|emb|CAQ66862.1| Bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           (EC 2.7.1.26) [Lactobacillus casei BL23]
 gi|227187395|gb|EEI67462.1| FAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 315

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 9/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++  + I +A   P+ V++FN HP  + +  S + I  LS   
Sbjct: 21  VLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLSTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KI++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK     
Sbjct: 81  EKIKIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLVG-LKADTVVAGFDYTYGKRDVAS 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L K      F  + + EL  N  Q VSS+ IR AL    +  A   LGY +T    V
Sbjct: 140 MALLPKYACGR-FDVISVPELAEN-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTAGKV 197

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   +  
Sbjct: 198 VHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGADRD 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R
Sbjct: 257 VTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVR 307


>gi|227486453|ref|ZP_03916769.1| possible FAD synthetase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235634|gb|EEI85649.1| possible FAD synthetase [Anaerococcus lactolyticus ATCC 51172]
          Length = 314

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 13/309 (4%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQS 65
           ++N  LP+ L+  VV++G FDG+HLGH  ++++ + ++     T  +L F  + +T ++ 
Sbjct: 9   DLNSDLPD-LEKKVVSLGYFDGVHLGHQKLMKRNVDLSKKYGYTPSILLFKENTKTTVKD 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 LS    + +IL ++G        F       S   FI+ ++ E L  K +I G 
Sbjct: 68  DKRY--LSSLEDKVEILSQLGIKTFCLVNFDENFMKLSPTDFIKTIIAEKLNAKIIIVGD 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFID-ELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            +RFG   +G    L++    + + T  +D E+ ++ ++I SS ++R  +  G +  A  
Sbjct: 126 DYRFGYKASGTVDTLREYENIFAYITDVVDFEMEDDHAKI-SSGHLRNFIRNGEIKKANK 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYA--IRFRTQDQTSYSGV 241
            LG  + I   V+HG++ GR L FPTAN+ LS P ++  +GVY      R +D   Y G+
Sbjct: 185 YLGRPYKIRGKVVHGKRRGRLLNFPTANLDLSFPYVIPTDGVYLTITNIRGKD---YYGL 241

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G NPT        +E+FIFDF+  IY +  +V F ++LRP+ KF   E+L   M +D
Sbjct: 242 TNIGSNPTFEEGDDKKIETFIFDFNDSIYDEDISVEFIEFLRPDFKFNSAEELIAQMDKD 301

Query: 302 EKKARKILE 310
           ++     +E
Sbjct: 302 KENGLNYIE 310


>gi|268683528|ref|ZP_06150390.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268623812|gb|EEZ56212.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 318

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFAARTGKT 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 255 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|225620023|ref|YP_002721280.1| riboflavin biosynthesis protein RibF [Brachyspira hyodysenteriae
           WA1]
 gi|225214842|gb|ACN83576.1| riboflavin biosynthesis protein RibF [Brachyspira hyodysenteriae
           WA1]
          Length = 311

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 155/292 (53%), Gaps = 15/292 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  +V IG FD +H GH  +++  ++ AN + +  ++       I + +  I+       
Sbjct: 15  KDSIVTIGKFDSVHKGHQKLIKYTVEYANKNNLISIAI-----VIKKKNVSIYNTED--- 66

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              +++ MG + +I   F  E     A++F  K L+E+  +K +  G  F FGKDR GD 
Sbjct: 67  NNALIKSMGINYIIVIDFLPEFYTMEAKEFFDK-LIEYYRMKHIAVGNDFAFGKDRMGDS 125

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K  ++ G    FI+ L N K   +SSSNIR AL+ G +++   +LG  +++   V+
Sbjct: 126 EFLKKYSKECGIGVSFINFL-NYKKDKISSSNIREALSNGDMVSVNKMLGREYSMSGLVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNGP 255
           HG  +GR +G+PTAN+++  +I + K GVY+   +     T Y  +   G +     N  
Sbjct: 185 HGNALGRKIGYPTANLEIPKNIFIPKMGVYSSTVQIGNSDTIYKALTFIGISNI---NKE 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           L +ES I DFS+ IYG++ T+    Y+R  IK   I+++K  +  DEKK RK
Sbjct: 242 LRVESHILDFSKMIYGKKITIVLLKYIRDNIKVNSIDEVKKLLENDEKKIRK 293


>gi|160940471|ref|ZP_02087816.1| hypothetical protein CLOBOL_05361 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437051|gb|EDP14818.1| hypothetical protein CLOBOL_05361 [Clostridium bolteae ATCC
           BAA-613]
          Length = 346

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 151/296 (51%), Gaps = 9/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +G FDG H GH  +L   +++  A   P  + +F   P T + +  P   ++    +
Sbjct: 47  IVTLGKFDGRHRGHQKLLRTMMELKEATGYPTAIFTFGTAPGTAV-TGKPQTVITTNLER 105

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +EK+G   L+ Y FT ET +   E F++ +L   +  + ++ G    FG   AG   
Sbjct: 106 RANMEKVGIDYLVEYPFTEETRHMEPEAFVKDILAGRMHAREIVVGPDCSFGYKGAGSAE 165

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L       G+H   I++ ++++  I SS+ IR  L KG+V  A  LLG  + I  +V+H
Sbjct: 166 LLSAMARDLGYHLHVIEKEKDHRRDI-SSTYIREELEKGNVEKANQLLGQPYAIHGEVVH 224

Query: 199 GEKIGRTL-GFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G  IG +L GFPTAN+ L P I  L + GVY  R    D   Y GV N G+ PT+    P
Sbjct: 225 GNHIGGSLLGFPTANI-LPPPIKRLPRYGVYVSRVLV-DGVYYKGVTNIGKKPTVGGEYP 282

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E++IF    +IYG+   V    + RPE KF   E+LK  + +D++ A    E+
Sbjct: 283 AGVETYIFGLEGDIYGKNIEVQLLAFDRPEQKFTSFEELKERIEKDKEFANAYYEN 338


>gi|325135620|gb|EGC58237.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis M0579]
          Length = 306

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|238028412|ref|YP_002912643.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia glumae BGR1]
 gi|237877606|gb|ACR29939.1| Riboflavin kinase/FAD synthetase [Burkholderia glumae BGR1]
          Length = 331

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 20/330 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 6   VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 65

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    AN   E F+++ LV  L 
Sbjct: 66  FNPAG-----APPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLH 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG+   L++ G +YGF    +  L       +SSS +R +L  G
Sbjct: 121 ARWMMVGDDFCYGARRAGNFASLREAGRRYGFDVEQMATLTAPNGTRISSSGVRASLAAG 180

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A   LG+ + I   V HG K+GR LGFPT N+ ++       G++ +         
Sbjct: 181 DLEAAKAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHP 240

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VA+ G  PT++  G +LLE+ + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 241 LPAVASLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRA 300

Query: 298 MGEDEKKARKILES------SYPLSERDRI 321
           + +D    R    +       + +S  DRI
Sbjct: 301 IAQDVADTRAYFAAHGGRGTGFAISATDRI 330


>gi|172057843|ref|YP_001814303.1| riboflavin biosynthesis protein RibF [Exiguobacterium sibiricum
           255-15]
 gi|171990364|gb|ACB61286.1| riboflavin biosynthesis protein RibF [Exiguobacterium sibiricum
           255-15]
          Length = 309

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 155/296 (52%), Gaps = 11/296 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII-QSSSPIFTLSPPS 76
            V+A+G FDG+HLGH  +L+ AI+ +   N P+ V++F+PHP+ ++   +  I  ++P  
Sbjct: 17  AVIALGFFDGVHLGHQRVLQTAIEKSRELNLPVAVMTFDPHPKQVLGNGTEQILYITPLD 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + + ++G   +   +FT+  +  S + F+   L+     + ++ G  + +G+  AG 
Sbjct: 77  RKLEKMAQLGIDRVYVIEFTVAFSELSPQDFVDHYLIA-AGARHIVAGFDYSYGRFGAGK 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L         HT   +   +++   VSS+ IR  L  G V  AA LLG  +  +  V
Sbjct: 136 MATLDFHSRGRFDHTTVSEHQADDEK--VSSTRIRRLLADGAVAEAALLLGEPYQTKGIV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           IHG+  GR +GFPTAN++  P+   ++ K GVYA     +D   +  + N GR PT    
Sbjct: 194 IHGDARGRQIGFPTANIR--PEFAYVIPKLGVYATFVHLEDGRKFPAMTNIGRRPTFYET 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           G + +E+ +  F +++YGQ   + +  YLR E  F  IE LK  + +D+  A + L
Sbjct: 252 GEVSIETHLLAFDEDLYGQELKLEWMAYLRDERAFDGIESLKTQLAQDKIHAMQAL 307


>gi|206579962|ref|YP_002240527.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae 342]
 gi|288937225|ref|YP_003441284.1| riboflavin biosynthesis protein RibF [Klebsiella variicola At-22]
 gi|290512630|ref|ZP_06551996.1| riboflavin biosynthesis protein RibF [Klebsiella sp. 1_1_55]
 gi|206569020|gb|ACI10796.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae 342]
 gi|288891934|gb|ADC60252.1| riboflavin biosynthesis protein RibF [Klebsiella variicola At-22]
 gi|289774971|gb|EFD82973.1| riboflavin biosynthesis protein RibF [Klebsiella sp. 1_1_55]
          Length = 312

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 16/298 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L++  +       P+ V+ F P P  +  +         P+
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQRLREEGRQRGLPVVVMIFEPQPLELFAADKA------PA 69

Query: 77  IQEKILEKMGFSA------LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              ++ EK+G+ A      ++  +F    A  +A+ FI ++LV  L V+ +  G  FRFG
Sbjct: 70  RLTRLREKLGYLAESGVDYVLCVRFDRRFAALTAQDFISELLVRRLGVQFLAVGDDFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD  +LQK G +YGF             +I SS+ +R AL    +L A  LLG+ F
Sbjct: 130 AGRQGDFLLLQKAGAEYGFDVTSTQTFCEGGVRI-SSTAVRQALADDDLLLAETLLGHPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          +GVAN G  PT 
Sbjct: 189 SISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPIAGVANIGTRPT- 247

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V      LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR++
Sbjct: 248 VAGVRQQLEVHLLDVVMDLYGRHINVVLRKKIRNEQRFASLDELKAQIARDELTAREL 305


>gi|167763722|ref|ZP_02435849.1| hypothetical protein BACSTE_02100 [Bacteroides stercoris ATCC
           43183]
 gi|167697838|gb|EDS14417.1| hypothetical protein BACSTE_02100 [Bacteroides stercoris ATCC
           43183]
          Length = 306

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 162/304 (53%), Gaps = 12/304 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           N+ LPN     V  IG FDG+H GH  ++EQ  K+A    +  +V++F  HPR ++Q   
Sbjct: 10  NELLPN-----VATIGFFDGVHRGHRFLIEQVCKVAAERGLASSVITFPVHPRKVMQPDF 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+    +  +L   G    I   FTL+ A  SA+QF+  +L +   V+ ++ G   
Sbjct: 65  RPELLTTCDEKVSLLAGTGIDYCIMLDFTLDLACLSAKQFM-AILKQDYRVQVLMIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+       + G++ G   V + +     +  VSSS IR  L +G+V  AA+ LG
Sbjct: 124 RFGHNRSEGFEDYVRYGQELGIE-VLLAQAYYTDAMTVSSSAIRRLLLQGNVSEAANCLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           Y+F ++  V++G ++GR +GFPTAN+++     ++  +GVYA+ +       ++G+ + G
Sbjct: 183 YQFFLDGTVVNGYRVGRKIGFPTANLRIGDCEKLVPADGVYAV-YVFLGGEKHAGMLSIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+       +E  IF+F  +IY Q   +SF    RPE+KF  I++L   + +DE + 
Sbjct: 242 YRPTLNNGIDRSIEVHIFNFDADIYNQPMRLSFVCRTRPELKFDSIDELIAQLHKDEAEI 301

Query: 306 RKIL 309
             IL
Sbjct: 302 TAIL 305


>gi|254673170|emb|CBA08029.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           alpha275]
          Length = 318

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 255 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|240124948|ref|ZP_04737834.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae SK-92-679]
          Length = 306

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQS---SS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFAARTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLGLLEKTGCVDAAWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|72382678|ref|YP_292033.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL2A]
 gi|72002528|gb|AAZ58330.1| riboflavin kinase / FMN adenylyltransferase [Prochlorococcus
           marinus str. NATL2A]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 154/302 (50%), Gaps = 10/302 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           N  LP  L     A+G+FDG+HLGH  +++  +K     P TV+SF PHPR ++   S +
Sbjct: 20  NAKLPTAL-----ALGSFDGLHLGHKKVIKAILKEPIGVP-TVVSFWPHPREVLFGESRL 73

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L  P+ +  +LE +G   L+   F    A+ SAE F+++VLV+ L  K +  G  FRF
Sbjct: 74  -RLDLPNEKTFLLEPLGIEQLVLVPFNKNLASKSAETFVEEVLVKTLHAKHIAVGENFRF 132

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++R GD   L+K G   G     +  + +N  ++ SSS +R AL  G + +A +LL   
Sbjct: 133 GRNREGDTSTLKKIGTSLGIKISIVPIVEDNHGRL-SSSRVRKALNDGDLKHAKYLLKRP 191

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFR-TQDQTSYSGVANFGRN 247
           +T    V  G  +G+ +G+PTAN+++     L   GVYA        +  +  V N G  
Sbjct: 192 YTFRGTVEKGRGLGKKIGWPTANLKIDGRKFLPSLGVYAAWASIASKKERFLAVMNMGPQ 251

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+ PN    +E  + D    + G    +     +R + KF +IE L   +  D K A++
Sbjct: 252 PTIDPNSLSAVEVHLLDKEINLLGHELIIEPVQRIRLQKKFDNIEALSKQISSDAKLAKE 311

Query: 308 IL 309
           IL
Sbjct: 312 IL 313


>gi|332686761|ref|YP_004456535.1| riboflavin kinase/ FMN adenylyltransferase [Melissococcus plutonius
           ATCC 35311]
 gi|332370770|dbj|BAK21726.1| riboflavin kinase/ FMN adenylyltransferase [Melissococcus plutonius
           ATCC 35311]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 155/290 (53%), Gaps = 13/290 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDGIH GH  +++   +IA      + V++FN HP  I Q   P  +  L+   
Sbjct: 21  VMVLGFFDGIHKGHQKVIQTGREIAKKRGLKLAVMTFNQHPAIIFQRKMPTEVTYLTNLE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +EK +  +G   L    FT E +  S ++F+ + +V+ L  K  + G  + +G     +
Sbjct: 81  EKEKRMADLGVDILYIVDFTEEFSKLSPQEFVDEYIVD-LHTKVAVAGFDYTYGHGTKEE 139

Query: 137 RGI-LQKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             + +  +  K  F  V +DE  L N K   +SS+ IR  + +G +L  A  LG+ +T  
Sbjct: 140 TSVEILPKYAKNRFEIVIVDEELLENEK---ISSTKIRLLMQEGDMLGVAKRLGHFYTTT 196

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GR LGFPTAN+Q+   + L K GVYA+R +  D   Y G+ + G N T   
Sbjct: 197 GIVVHGDARGRLLGFPTANVQVDSSVYLPKNGVYAVRMKVGD-IWYLGMGSIGHNDTFGS 255

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N  L +E  IF F+Q IY ++  V + DYLR +I+F++I+ L   + +D+
Sbjct: 256 NRKLTVEINIFHFNQMIYDEKVIVEWHDYLRNQIQFENIDALVQQLNQDK 305


>gi|123966667|ref|YP_001011748.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9515]
 gi|123201033|gb|ABM72641.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9515]
          Length = 307

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 154/290 (53%), Gaps = 5/290 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  +++  +K    +P T+ SF PHPR I+   + +  L  P  +  I
Sbjct: 16  IAIGSFDGVHAGHRQLIDSVVKENKYTP-TIASFWPHPREILYGETRL-RLDLPEEKLPI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F    +  SA+ FI+++L+  L+ K++  G  FRFG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDKNLSRLSADNFIKEILINQLQAKSISVGANFRFGYKRSGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                       I  L++N+ +I SSS +R  L K  + NA  +L   ++ +  V+ G+ 
Sbjct: 134 LITRDMDIKLKIISILKDNEGRI-SSSRVRDLLQKSDLKNALRILNRPYSFKGKVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ-TSYSGVANFGRNPTMVPNGPLLLE 259
           IG+ LGFPTAN+++     L  EGVYA      +     + V N G  PT+ P  P  +E
Sbjct: 193 IGKRLGFPTANLEIDGRKFLPGEGVYAAWSTINNSPNKIASVMNLGSQPTIDPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + +   ++Y    +V   + LR +IKF++I++L   +  D + A KIL
Sbjct: 253 VHLINKDIDLYDLNLSVEPVEKLRSQIKFQNIDQLSNQITIDRENALKIL 302


>gi|328950616|ref|YP_004367951.1| riboflavin biosynthesis protein RibF [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450940|gb|AEB11841.1| riboflavin biosynthesis protein RibF [Marinithermus hydrothermalis
           DSM 14884]
          Length = 295

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 17/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +VAIG+FDG+HLGH  +L +A++ A     P+ V +F+P  +  ++    +  LS  S +
Sbjct: 16  IVAIGSFDGVHLGHQYLLRRALREAKRRGLPLLVYTFDPPTKVFVKG---VGMLSSMSEK 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L ++G    +   F    A  S ++F++ +    LE   +  G  F FG+ R+G   
Sbjct: 73  VDLLRELGVEIALVVPFNEAFARRSKDEFLEDL--RALEACAIYVGEDFGFGRGRSGTPQ 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ         TV + EL       V S+ IR  L  G V  A HLLG  ++    V  
Sbjct: 131 DLQAVAPTV---TVPLLELGGAP---VKSTRIRALLEAGRVEEAKHLLGRPYSARGVVAG 184

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           G+++GRTLGFPTAN+++    +L  GVYA+R  T    ++ G+AN G  PT+  NG  L 
Sbjct: 185 GDQLGRTLGFPTANLRVPSFKVLPPGVYAVRV-TGPHGTHGGMANVGTRPTV--NGRALR 241

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE  +F F+  +YG+   V+F   LR E +F+ +E LK  + +D + AR+ L
Sbjct: 242 LEVHLFGFTGNLYGEELEVAFLKKLRSEQRFESLEALKAQLAQDAEAARRYL 293


>gi|319792057|ref|YP_004153697.1| riboflavin biosynthesis protein ribf [Variovorax paradoxus EPS]
 gi|315594520|gb|ADU35586.1| riboflavin biosynthesis protein RibF [Variovorax paradoxus EPS]
          Length = 349

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 152/322 (47%), Gaps = 34/322 (10%)

Query: 21  VVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            + IGNFDG+H GH   L L Q        P  VL+F PHPR    + +    L+P  I 
Sbjct: 17  ALTIGNFDGVHRGHQAMLALLQTEARQRGLPSCVLTFEPHPRDYFAALTKKPDLAPARIG 76

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L   G +  I   F    A+ S E FIQ VLV+ L  + V+ G  FRFG  R
Sbjct: 77  TLRDKLSELAACGVAQTIVLPFDGRLASQSPEDFIQNVLVDGLRARYVLVGDDFRFGAKR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+  GF     D  R N  ++    VSSS +R AL +G + +A  LLG  
Sbjct: 137 AGDYAMLDAAGDARGF-----DVARMNSYEVHGLRVSSSAVREALAEGRMADAQTLLGRP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +TI   V+HG K+GR L         GF T N++         G++A+           G
Sbjct: 192 YTISGHVVHGRKLGRALGASAPGQDDGFRTLNLRFKHWKPAASGIFAVLVHGLADKPLPG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++  N    G +LLE+   ++     S+  YG+   V     L  E+++  +
Sbjct: 252 VANLGVRPSLDANDVNAGRVLLETHCLEWPSHLGSEGAYGKIVRVELLHKLHDELRYTSL 311

Query: 292 EKLKIYMGEDEKKARKILESSY 313
           E L   + +D + AR    S++
Sbjct: 312 EALTAGIAKDGRDARAFFASTH 333


>gi|329895215|ref|ZP_08270879.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC3088]
 gi|328922453|gb|EGG29795.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC3088]
          Length = 292

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 3/291 (1%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+H GH  +L+  ++ A     P TV+ F P P+  I+       +     + + 
Sbjct: 1   MGAFDGVHRGHQWVLKHLVERAQERDLPTTVVLFEPLPKEYIRPLEAPARIMNFREKTEA 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L + G   ++R  F       +AE FI  V  E +  K V+ G  FRFG DR GD  ++ 
Sbjct: 61  LAECGIDRVLRIHFNATVQQMTAESFIHDVFYEGIGAKYVVLGDDFRFGNDRQGDAELMT 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +RG++YGF             +I SS+ IR  L +G    A  LLG RF +   V++G++
Sbjct: 121 RRGQRYGFDCAATPTFEFEGDRI-SSTRIREVLAEGAFDEAERLLGRRFAMSGRVVYGKQ 179

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +GR LGFPTAN++L        GV+++       T    +AN G  PT+  +    LE  
Sbjct: 180 LGRQLGFPTANIRLHRLRAPVNGVFSVHVDGPGFTGAPAIANVGTRPTIDDSIEANLEVH 239

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + D + ++YG++  V+F   +R E+KF  I +LK  +  D    R+  +  
Sbjct: 240 LIDRNIDLYGKQIRVTFQHKVRDEMKFDGIHQLKERVLADIADTRRWFQEQ 290


>gi|284992340|ref|YP_003410894.1| riboflavin biosynthesis protein RibF [Geodermatophilus obscurus DSM
           43160]
 gi|284065585|gb|ADB76523.1| riboflavin biosynthesis protein RibF [Geodermatophilus obscurus DSM
           43160]
          Length = 324

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++ P  L   VV +G +DG+H GH  ++  A+  A   + P  +L+F+PHP  +++  S 
Sbjct: 8   EATPGDLGRTVVTVGMYDGVHRGHQQLIGTAVARARALDRPCLLLTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G   +    FT E    S E F   VLVE L   +V+ G  F 
Sbjct: 68  PAILTSLDRKAELVAGLGVDEMCVLPFTPEFMRLSPETFTHTVLVEHLHAASVVVGENFS 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ----IVSSSNIRTALTKGHVLNAAH 184
           +G   AG    L + G ++GF TV    L  + S      +SS+ +R  +  G +++AA 
Sbjct: 128 YGHRAAGTVTTLAQEGRRFGF-TVEPVPLAGDSSADGEITISSTYVRACVAAGDMVSAAR 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYA-----IRFRTQDQTSY 238
            LG    IE  V+ G++ GR LG+PTAN++  P   +  +GVYA     +  RT    S 
Sbjct: 187 ALGRPHRIEGVVVRGDRRGRELGYPTANVESPPFTAIPADGVYAGGLVILDPRTGASVST 246

Query: 239 SGVA-NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           S  A + G NPT        +E+++ DF  ++YG+   V F   LRP   F  +E L   
Sbjct: 247 SPAAISVGTNPTF-QGTRRTVEAYLLDFDGDLYGEHVGVEFVQRLRPMAAFSGVEDLVAQ 305

Query: 298 MGEDEKKARKIL 309
           M  D  + R+++
Sbjct: 306 MDRDVARTREVM 317


>gi|60683569|ref|YP_213713.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           NCTC 9343]
 gi|253566562|ref|ZP_04844015.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|60495003|emb|CAH09821.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           NCTC 9343]
 gi|251944734|gb|EES85209.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301165082|emb|CBW24650.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           638R]
          Length = 313

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 9/309 (2%)

Query: 7   IEINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII 63
           ++I +++P  L    VA IG FDG+H+GH  ++EQ  ++A    +   +++F  HPR ++
Sbjct: 1   MQIIRNIPGVLPEPCVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIHPRKVM 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            +      L+    +  +LE+ G        FT E ++ +A +F+  +L +   V+T++ 
Sbjct: 61  NADYRPELLTTSEEKLALLEETGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRVQTLVI 120

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG +R+       + G + G   +       +   I SSS IR  L +G V  AA
Sbjct: 121 GYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDDLHI-SSSVIRKMLHQGEVDRAA 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGV 241
             LGY + ++  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+   T D  +Y+G+
Sbjct: 180 RCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLVPADGVYAVHV-TFDGHTYNGM 238

Query: 242 ANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            N G  PT + NGP   +E  I  F  +IY +   +SF  YLRPE+KF  IE L   + +
Sbjct: 239 LNIGTRPT-IGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIAQLHQ 297

Query: 301 DEKKARKIL 309
           D      +L
Sbjct: 298 DAADVEALL 306


>gi|87308060|ref|ZP_01090202.1| probable riboflavin kinase (FAD synthetase) [Blastopirellula marina
           DSM 3645]
 gi|87289142|gb|EAQ81034.1| probable riboflavin kinase (FAD synthetase) [Blastopirellula marina
           DSM 3645]
          Length = 316

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 159/304 (52%), Gaps = 8/304 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + H++E    +P  + GG + IGNFDG+HLGH  I+E   + A   + P  V +F+PH
Sbjct: 1   MRLLHDLE---HVPPEVLGGALTIGNFDGVHLGHARIVESIRRQARAVHGPTVVFTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L+    + ++L ++G  A+I Y         SAE F Q+++V+ L+ 
Sbjct: 58  PVRLLRPDQTPPPLTWTRRKAQLLAQLGVDAMIAYPTNRALLELSAEAFFQQIVVDQLQA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKG 177
           K ++ G  F FG++R G+  +L +   ++      ++ ++     +I+SSS +R A+  G
Sbjct: 118 KAMVEGPNFYFGRNRQGNTALLGQLCRQHQMALEIVEPMQLAGHDEIISSSRVRQAIAGG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  A  +L   + +   V HG   G +LGF TAN++    I+   GVYA  +  + + +
Sbjct: 178 DVEAARRMLTEPYRLRGMVTHGAGRGGSLGFATANLEAIDTIIPAHGVYA-GYVVRQELT 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++   + G NPT    G   +E+ + DF+  +YG+   ++F   LR    F D+++L   
Sbjct: 237 HAAAIHIGPNPTF-GEGQAKVEAHLIDFAGSLYGEPLELAFLARLRDVHTFNDVQQLTSQ 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IHQD 299


>gi|261393181|emb|CAX50799.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase
           (flavokinase) and FMN adenylyltransferase (FAD
           pyrophosphorylase; FAD synthetase)] [Neisseria
           meningitidis 8013]
          Length = 306

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+     +   +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVIFEPQPKEFFAALAGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|255693085|ref|ZP_05416760.1| riboflavin biosynthesis protein RibF [Bacteroides finegoldii DSM
           17565]
 gi|260621125|gb|EEX43996.1| riboflavin biosynthesis protein RibF [Bacteroides finegoldii DSM
           17565]
          Length = 322

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 161/300 (53%), Gaps = 13/300 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG FDG+H GH  ++ Q  +IA    +   +++F  HPR ++ +      L+ P  +
Sbjct: 16  IATIGFFDGVHTGHRYLIRQVKEIAAAKGLRSALVTFPVHPRKVMNADYRPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L+ +G    +   FT E +  +A +F+ +VL E  +VK ++ G   RFG +R+    
Sbjct: 76  IRLLDDIGVDYCLMLNFTPEISRLTAREFMAQVLKERYQVKCLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNN------KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G++ G   +      NN      ++  +SSS IR  L +G V  AA  LGY + +
Sbjct: 136 DYVRYGKEIGIEVIRAHAYTNNIKTGEHQNTPISSSLIRKLLHEGEVEQAALCLGYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDGQTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F   IY +   ++F    RPE+KF DI++L + + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSNIYDKFIRLTFVKRTRPELKFADIDELIVQLHKDAEETETIL 313


>gi|152968601|ref|YP_001333710.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893006|ref|YP_002917740.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262044936|ref|ZP_06017978.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330009359|ref|ZP_08306516.1| riboflavin biosynthesis protein RibF [Klebsiella sp. MS 92-3]
 gi|150953450|gb|ABR75480.1| hypothetical protein KPN_00020 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238545322|dbj|BAH61673.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|238774009|dbj|BAH66506.1| conserved hypothetical protein [Klebsiella pneumoniae NTUH-K2044]
 gi|259037663|gb|EEW38892.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534822|gb|EGF61368.1| riboflavin biosynthesis protein RibF [Klebsiella sp. MS 92-3]
          Length = 312

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 16/298 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L++  +       P+ V+ F P P  +  +         P+
Sbjct: 16  GCVLTIGNFDGVHRGHQALLQRLREEGRQRGLPVVVMIFEPQPLELFAADKA------PA 69

Query: 77  IQEKILEKMGFSA------LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              ++ EK+G+ A      ++  +F    A  +A+ FI ++LV  L V+ +  G  FRFG
Sbjct: 70  RLTRLREKLGYLAESGVDYVLCVRFDRRFAALTAQDFISELLVRRLGVQFLAVGDDFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD  +LQK G +YGF             +I SS+ +R AL    +L A  LLG+ F
Sbjct: 130 AGRQGDFLLLQKAGAEYGFDVTSTQTFCEGGVRI-SSTAVRQALADDDLLLAETLLGHPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          +GVAN G  PT 
Sbjct: 189 SISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPIAGVANIGTRPT- 247

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V      LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  AR++
Sbjct: 248 VAGVRQQLEVHLLDVVMDLYGRHINVILRKKIRNEQRFASLDELKAQIARDELTAREL 305


>gi|325141638|gb|EGC64100.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           961-5945]
          Length = 306

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 ARK 307
           A++
Sbjct: 303 AKR 305


>gi|148240051|ref|YP_001225438.1| riboflavin biosynthesis protein ribF (riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. WH 7803]
 gi|147848590|emb|CAK24141.1| Riboflavin biosynthesis protein ribF (Riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. WH 7803]
          Length = 308

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 145/293 (49%), Gaps = 4/293 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  ++E           TV+SF PHPR ++    P   L  P  +  
Sbjct: 15  ALALGSFDGLHAGHRRVIEAITANPAGGHPTVVSFWPHPREVLHGE-PRLRLDLPDEKLH 73

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE +G   L+   FT + A  SA  F+ +VL+  L+ + +  G  FRFG+ R GD   L
Sbjct: 74  LLEPLGVEQLVLVPFTKQLAQLSAADFVDQVLLSTLQARHIAVGANFRFGRGREGDTDTL 133

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +     G     +  L +   ++ SSS IR AL+ G +  AA LLG  ++ +  V+ G 
Sbjct: 134 ARLASAAGVTVSVVPILEDGDGRM-SSSRIRAALSAGELQQAATLLGRAYSFQGKVVRGR 192

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ-TSYSGVANFGRNPTMVPNGPLLL 258
            +GR LG+PTAN+Q+     L   GVYA       Q T    V N G  PT+ P  P  +
Sbjct: 193 GLGRGLGWPTANLQVDGRKFLPGLGVYAAWAWVDGQGTRLPAVMNLGPQPTIDPGSPSAV 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E  + D  +E+ G+   V     LR + +F  +E+L   +G D   AR  L +
Sbjct: 253 EVHLLDVERELVGRSIQVEPVRRLRGQQRFAGLEELSNQIGRDADAARDTLRA 305


>gi|228992537|ref|ZP_04152464.1| FMN adenylyltransferase [Bacillus pseudomycoides DSM 12442]
 gi|228767171|gb|EEM15807.1| FMN adenylyltransferase [Bacillus pseudomycoides DSM 12442]
          Length = 335

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A KIA+       V++F+PHP  ++ +  + +  ++P  I
Sbjct: 33  VMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPHPSVVLGKKEAHVEYITPLRI 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK++  +G   L   KF    A    +QF+ + ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLNVKHVVAGFDYSYGRLGKGTM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+E  
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVEGM 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  + GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVALSEEYLLPPVGVYAVRLKVHGEW-HDGVCNIGYKPTFKDDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E  +F F+++IY Q  TV +   +R E KF  I++L   + +D+K A++   ++
Sbjct: 267 RNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDELVAQIAKDKKTAQEYFSTT 325


>gi|229140450|ref|ZP_04269005.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST26]
 gi|229197919|ref|ZP_04324635.1| FMN adenylyltransferase [Bacillus cereus m1293]
 gi|228585637|gb|EEK43739.1| FMN adenylyltransferase [Bacillus cereus m1293]
 gi|228643011|gb|EEK99287.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST26]
          Length = 335

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|219669690|ref|YP_002460125.1| riboflavin biosynthesis protein RibF [Desulfitobacterium hafniense
           DCB-2]
 gi|219539950|gb|ACL21689.1| riboflavin biosynthesis protein RibF [Desulfitobacterium hafniense
           DCB-2]
          Length = 318

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 165/311 (53%), Gaps = 7/311 (2%)

Query: 7   IEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII 63
           ++I Q LP+      V+A+GNFDG+HLGH  +L+  ++ A    +   VL F PHP  ++
Sbjct: 1   MQIIQELPSDPGHQCVLALGNFDGVHLGHQRLLKSGLEQAAQKGVDLAVLLFEPHPLKLL 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                +  L+    Q ++  ++G   +    FT E A+ S E F++ +LV+ L V  ++ 
Sbjct: 61  FPERVLGFLTTQKEQMRLFSEIGVDRVYLVPFTKEMADTSPEGFVRDILVK-LGVIHIVV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG    G    LQ  G+ YGF  V + + +  + +++SS+ +R AL  G  + A 
Sbjct: 120 GFNYSFGALGKGTAEDLQCYGQDYGF-GVSVLQPQTFEGKVISSTAVRKALLNGDAVQAK 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVA 242
            LLG  + +   V+ GE+ G  LG+PTAN+++  ++++ K GVYA+    + +  + G+ 
Sbjct: 179 KLLGRTYKLVGTVVEGERRGHDLGYPTANLRIYEELIIPKRGVYAVWAEIEGRLVH-GMM 237

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      L +E   FDFS ++YG    +   + +R E KF   ++LK  +  D 
Sbjct: 238 NIGMKPTFHEEYALTVEIHFFDFSGDLYGMELAICCEEKIRDERKFNGFDELKGQLERDA 297

Query: 303 KKARKILESSY 313
            K +++LE  +
Sbjct: 298 LKTKQVLEEIF 308


>gi|291009322|ref|ZP_06567295.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 320

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 20/320 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + LP      VV IG FDGIH GH  ++  A++ A     P  +++F+PHP  +++  S 
Sbjct: 2   EQLPGGWGRCVVTIGVFDGIHRGHQQLITHAVQRARRRGLPCVLMTFDPHPAEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++ E++G        FT E +   A+QF+ +VLVE L    V+ G  FR
Sbjct: 62  PAQLTTLRRRAELAEQLGVDVFCVLPFTQEVSRIPADQFVHEVLVERLHAAVVVVGENFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDEL--------RNNKSQIVSSSNIRTALTKGHVL 180
           FG   AGD   L++ GE++GF  V  D L         ++ S   SS+ IR+ +  G V+
Sbjct: 122 FGHKAAGDITALEQLGERFGFE-VETDALLTGPAERDGDDGSVTFSSTYIRSCIDAGDVV 180

Query: 181 NAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSP-DILLKEGVYA------IRFRT 232
            AA  LG    +E  V+ G  + G+ LGFPTAN+       +  +G+YA      +R   
Sbjct: 181 AAASALGRYHRLEGIVVRGAGRGGKELGFPTANLNTPAYAAIPADGIYACWFTHRLRGAA 240

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           +   +     + G NPT        +E+F+ D   + YG++  + F   LR +++F   +
Sbjct: 241 EPGPALPAAVSVGSNPTF-SGTERTVEAFVLDIDADFYGEQVDLDFVRRLRGQVRFDSAD 299

Query: 293 KLKIYMGEDEKKARKILESS 312
            L   M  D  + R+IL + 
Sbjct: 300 ALIEQMHRDVDEVREILRAD 319


>gi|302542136|ref|ZP_07294478.1| riboflavin biosynthesis protein RibF [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302459754|gb|EFL22847.1| riboflavin biosynthesis protein RibF [Streptomyces himastatinicus
           ATCC 53653]
          Length = 318

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 9/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPAVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  A++   FT E +  +   F+ KVLV+ L  + V+ G  FR
Sbjct: 68  PPLLAPHQRRAELMAALGVDAVLILPFTQEFSRLTPADFVVKVLVDKLHARVVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L++ G  Y +    ID      +   +  SS+ +R  + +G V  A  +
Sbjct: 128 FGHRAAGNVDSLRELGTTYDYEVEVIDLYERGAAGGGEPFSSTLVRRLVAEGDVAGAMEV 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA  + T +  S     + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPADGVYA-GWLTAEGESMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  +LR + KF  IE L   M  D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAFLRGQEKFDSIEALLERMAADVK 305

Query: 304 KARKILE 310
           +A +++E
Sbjct: 306 RASELVE 312


>gi|206978183|ref|ZP_03239064.1| riboflavin biosynthesis protein RibF [Bacillus cereus H3081.97]
 gi|217961229|ref|YP_002339797.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus AH187]
 gi|222097253|ref|YP_002531310.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Bacillus
           cereus Q1]
 gi|206743600|gb|EDZ55026.1| riboflavin biosynthesis protein RibF [Bacillus cereus H3081.97]
 gi|217063304|gb|ACJ77554.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH187]
 gi|221241311|gb|ACM14021.1| riboflavin biosynthesis protein RibC [Bacillus cereus Q1]
          Length = 323

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|134102365|ref|YP_001108026.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133914988|emb|CAM05101.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 326

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 20/320 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + LP      VV IG FDGIH GH  ++  A++ A     P  +++F+PHP  +++  S 
Sbjct: 8   EQLPGGWGRCVVTIGVFDGIHRGHQQLITHAVQRARRRGLPCVLMTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++ E++G        FT E +   A+QF+ +VLVE L    V+ G  FR
Sbjct: 68  PAQLTTLRRRAELAEQLGVDVFCVLPFTQEVSRIPADQFVHEVLVERLHAAVVVVGENFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDEL--------RNNKSQIVSSSNIRTALTKGHVL 180
           FG   AGD   L++ GE++GF  V  D L         ++ S   SS+ IR+ +  G V+
Sbjct: 128 FGHKAAGDITALEQLGERFGFE-VETDALLTGPAERDGDDGSVTFSSTYIRSCIDAGDVV 186

Query: 181 NAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSP-DILLKEGVYA------IRFRT 232
            AA  LG    +E  V+ G  + G+ LGFPTAN+       +  +G+YA      +R   
Sbjct: 187 AAASALGRYHRLEGIVVRGAGRGGKELGFPTANLNTPAYAAIPADGIYACWFTHRLRGAA 246

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           +   +     + G NPT        +E+F+ D   + YG++  + F   LR +++F   +
Sbjct: 247 EPGPALPAAVSVGSNPTF-SGTERTVEAFVLDIDADFYGEQVDLDFVRRLRGQVRFDSAD 305

Query: 293 KLKIYMGEDEKKARKILESS 312
            L   M  D  + R+IL + 
Sbjct: 306 ALIEQMHRDVDEVREILRAD 325


>gi|229157385|ref|ZP_04285463.1| FMN adenylyltransferase [Bacillus cereus ATCC 4342]
 gi|228626112|gb|EEK82861.1| FMN adenylyltransferase [Bacillus cereus ATCC 4342]
          Length = 335

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|170017446|ref|YP_001728365.1| riboflavin biosynthesis protein RibF [Leuconostoc citreum KM20]
 gi|169804303|gb|ACA82921.1| Riboflavin biosynthesis protein RibF [Leuconostoc citreum KM20]
          Length = 316

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 161/296 (54%), Gaps = 9/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+HLGH  ++++A   A+    P+ VL+++PHP    ++ + P+  L+    
Sbjct: 23  VVAMGFFDGVHLGHQAVIKRAKAEADALGVPLAVLTYDPHPSVAFKALTEPLKYLTVVKQ 82

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++LE +G S + + +FT + A  S + F+ +VL++ L    V+ G    +G D+    
Sbjct: 83  KAQLLETLGVSEMYKMQFTSQLAGLSPQVFVDEVLMQ-LNPVAVVAGFDHLYGSDKNQAN 141

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
                   K  F  + + E  +   +I  SS IR+AL  G +      LG  +     V+
Sbjct: 142 MANLAIYAKARFDVIIVPEFDDLGLKI-GSSKIRSALCVGDMQTVNRQLGRIYHTTGIVV 200

Query: 198 HGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HGE  GR LGFPTAN+ L+P++  L   G+YA++     Q  + G+A+ GRN T   N P
Sbjct: 201 HGEARGRELGFPTANV-LTPELEWLPGIGIYAVKISIAGQW-HIGMASIGRNVTFGDNRP 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E  I DF+Q IYG+  TV++  +LR E+KF  ++ L   + +D+   R   E+
Sbjct: 259 ITVEINILDFNQTIYGEDVTVAWHHHLRGEVKFNQVDDLITQLEKDKVATRTYFET 314


>gi|167580111|ref|ZP_02372985.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis TXDOH]
 gi|167618176|ref|ZP_02386807.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis Bt4]
 gi|257139999|ref|ZP_05588261.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis E264]
          Length = 330

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVERTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++GF    ++ L +      SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGAKRAGDFASLKAAGERFGFEVEQMETLADADGARFSSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAAARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGIGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|240079962|ref|ZP_04724505.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|240122755|ref|ZP_04735711.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID332]
          Length = 306

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVVFEPQPKEFFALRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|268596102|ref|ZP_06130269.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|268681356|ref|ZP_06148218.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268549890|gb|EEZ44909.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|268621640|gb|EEZ54040.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID332]
          Length = 319

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVVFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|240127456|ref|ZP_04740117.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 306

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|228986952|ref|ZP_04147078.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772730|gb|EEM21170.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 335

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 161/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A+   +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFASLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKIEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVDQIAKDKKIAQE 320


>gi|229544440|ref|ZP_04433498.1| riboflavin biosynthesis protein RibF [Bacillus coagulans 36D1]
 gi|229324925|gb|EEN90602.1| riboflavin biosynthesis protein RibF [Bacillus coagulans 36D1]
          Length = 320

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 14/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII-QSSSPIFTLSPPSI 77
            +A+G FDGIHLGH  +++ A  IA  N     V++F PHP  ++ +    I  ++P   
Sbjct: 21  AIALGYFDGIHLGHQKVIKTARGIAEKNGWKSAVMTFEPHPSIVLGKKKDGIELITPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + K++EK+G   L   +FT   A+   +QF+ + L   L VK V+ G  + +GK   G+ 
Sbjct: 81  KIKLIEKLGVDYLFVVRFTSRFASLLPQQFVDQYLAA-LGVKHVVAGFDYTYGKFGKGNM 139

Query: 138 GILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             L +      F    I++L   N  + VSS+ IR+ + +G V     LLG  + I+  V
Sbjct: 140 ENLPEYANGR-FGITVIEKLALENTGEKVSSTLIRSKIREGKVGEVKPLLGRDYEIKGIV 198

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGEK GR LGFPTAN++L+   +L   GVY ++ +  D T ++G+ + G NPT     P
Sbjct: 199 VHGEKRGRQLGFPTANLKLTASYMLPPNGVYIVQMKVAD-TWHNGLCSIGYNPTF--KNP 255

Query: 256 ----LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  E ++ DFS  IYG+   V +   +R E KF  +E L   M  DE  AR+  E
Sbjct: 256 EEYEKTTEVYLLDFSDTIYGEEAVVKWLARIREEKKFARVEDLIEEMKRDETAARRYFE 314


>gi|42782897|ref|NP_980144.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus ATCC 10987]
 gi|42738824|gb|AAS42752.1| riboflavin biosynthesis protein RibC [Bacillus cereus ATCC 10987]
          Length = 323

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|15677670|ref|NP_274831.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis MC58]
 gi|7227089|gb|AAF42169.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           MC58]
 gi|316984443|gb|EFV63416.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           H44/76]
          Length = 306

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +     
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVTVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 ARK 307
           AR+
Sbjct: 303 ARR 305


>gi|88855375|ref|ZP_01130039.1| riboflavin kinase/ FMN adenyltransferase [marine actinobacterium
           PHSC20C1]
 gi|88815282|gb|EAR25140.1| riboflavin kinase/ FMN adenyltransferase [marine actinobacterium
           PHSC20C1]
          Length = 318

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 13/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +F ++E   ++P       V IG FDG+H GH  +L +  +IA+   +   V++F+ +
Sbjct: 1   MDLFESVE---AVPAGYGRAAVTIGKFDGVHGGHRAVLARLRQIADERGLRSVVVTFDRN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKM---GFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P ++++   P     P   +E+ LE++   G  A +   F    +  +AE F+  VL   
Sbjct: 58  PMSLLK---PELCPLPLISKEQKLERLASTGIDATLMLTFDRALSEVNAEDFVATVLAGA 114

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+   V+ G  FRFG   AGD  +L++ G ++ F  V + ++     + +SS+ +R  L 
Sbjct: 115 LDTGVVLVGADFRFGARGAGDVELLRELGVRHNFEVVVVGDIELEAGRRISSTFVRELLA 174

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
           +G V  A+ +L    ++   V+ G++ GR LG+PTAN+Q  P+  +  +GVYA  +   D
Sbjct: 175 EGQVAEASRILTAPHSVRGIVVLGQQRGRELGYPTANLQPVPEGFIPADGVYAA-WLVID 233

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T ++   + G NPT        +E+   D   +IYG+R  + F +++R  +KF  ++ L
Sbjct: 234 GTRFAAAVSIGNNPTFEGVAEKQVEAHALDQDFDIYGKRVEIEFVEFIRGMVKFSSVDSL 293

Query: 295 KIYMGEDEKKARKIL 309
              M  DE+  R IL
Sbjct: 294 VEQMCIDEETTRTIL 308


>gi|166030869|ref|ZP_02233698.1| hypothetical protein DORFOR_00549 [Dorea formicigenerans ATCC
           27755]
 gi|166029136|gb|EDR47893.1| hypothetical protein DORFOR_00549 [Dorea formicigenerans ATCC
           27755]
          Length = 298

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 15/293 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V  G FDG+H GH  +++   K+ +   +   V +F+          SP   + P   Q
Sbjct: 17  AVTFGKFDGLHKGHMTLVDTVKKLQDKDDVDSVVCAFD--------MDSPALLMLPQERQ 68

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + +++ +  L+   FT E     AE FI+ +++       V+ GT F+FG ++ GD  
Sbjct: 69  IHLEDEVDY--LVDCPFTDEIRQMRAEDFIRNIIIGTFHAAYVVVGTDFQFGYNKEGDIY 126

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L +  E+YG+  + ++++R  ++ I+SS+  +  L  G++     LLGY + I   V H
Sbjct: 127 MLAQYQERYGYRLIVLEKIRY-ENHIISSTYTKKILGTGNMDLVGRLLGYSYGICGTVEH 185

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G K+GRTLGFPT N+      I+   GVY  R    D   Y+G+AN G  PT+     + 
Sbjct: 186 GHKLGRTLGFPTMNIAWPKRKIIPPRGVYLCR-AYMDGYGYNGIANVGVRPTVSNEEKVW 244

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           LE+F+FD+  + YG+   V   +++RPE KF+  E+LK  + +D    R+  +
Sbjct: 245 LETFLFDYEADAYGKEVMVELIEFVRPEQKFESKEELKARVDKDIASGRQYFQ 297


>gi|282882035|ref|ZP_06290676.1| riboflavin biosynthesis protein RibF [Peptoniphilus lacrimalis
           315-B]
 gi|281298065|gb|EFA90520.1| riboflavin biosynthesis protein RibF [Peptoniphilus lacrimalis
           315-B]
          Length = 302

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 158/294 (53%), Gaps = 10/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSP 74
           K  ++A+GNFDG+H GH  +LE  +KIA    +   VL F  H   +  ++   I T + 
Sbjct: 14  KNSIIALGNFDGVHKGHRKLLESTVKIAKEKKLKSAVLGFKSHSSNMYSENKKKILTTNT 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  I   +G   +    F+ E  + S  +F++  L E L+VK ++ G  + F   +A
Sbjct: 74  SKFE--IFSDLGIDIVYLIDFSKEFMSMSPMEFLKDFLQEKLKVKGLVVGYDYTFAYKKA 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD   L++    + F+ + I E +  + Q +SSS IR  +++G +  A  LL   FT+  
Sbjct: 132 GDVNYLKEHS--FLFNWLDIIEEQTWQGQAISSSLIRKLISEGKIKEANFLLDSNFTVMG 189

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            VIH + +G+ +G+PTAN++L  + I+ + GVY       D   Y    + G NPT+  +
Sbjct: 190 KVIHNKGLGQKMGYPTANLELCDNYIIPRYGVYDTDIIV-DGKKYKAATSVGTNPTVEDD 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           G + +E+ I DF+  IYG+   + F D++RPE+ FK+I++L   +  D KK R+
Sbjct: 249 G-IKIEAHILDFNDNIYGKTVELIFLDFIRPELVFKNIDELFKQINLDVKKVRE 301


>gi|239631354|ref|ZP_04674385.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301066614|ref|YP_003788637.1| FAD synthase [Lactobacillus casei str. Zhang]
 gi|239525819|gb|EEQ64820.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300439021|gb|ADK18787.1| FAD synthase [Lactobacillus casei str. Zhang]
          Length = 315

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 154/293 (52%), Gaps = 13/293 (4%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++  + I +A   P+ V++FN HP  + +  S + I  LS   
Sbjct: 21  VLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLSTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +I++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK     
Sbjct: 81  EKIRIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLVG-LKADTVVAGFDYTYGKRDVAS 139

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             +L K  RG    F  + + EL  +  Q VSS+ IR AL    +  A   LGY +T   
Sbjct: 140 MALLPKYARGR---FDVISVPELAED-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTAG 195

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   +
Sbjct: 196 KVVHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGAD 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R
Sbjct: 255 RDVTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVR 307


>gi|229174475|ref|ZP_04302007.1| FMN adenylyltransferase [Bacillus cereus MM3]
 gi|228609035|gb|EEK66325.1| FMN adenylyltransferase [Bacillus cereus MM3]
          Length = 335

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANIGLSDEYLLPPVGVYAVRLKVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|269213796|ref|ZP_05982870.2| riboflavin biosynthesis protein RibF [Neisseria cinerea ATCC 14685]
 gi|269145391|gb|EEZ71809.1| riboflavin biosynthesis protein RibF [Neisseria cinerea ATCC 14685]
          Length = 306

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|325139654|gb|EGC62193.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis CU385]
 gi|325200895|gb|ADY96350.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           H44/76]
          Length = 318

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +     
Sbjct: 23  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVTVVFEPQPKEFFALRTGRM 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 255 GFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 314

Query: 305 ARK 307
           AR+
Sbjct: 315 ARR 317


>gi|324327703|gb|ADY22963.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 323

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVAGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHDEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|258511419|ref|YP_003184853.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478145|gb|ACV58464.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 325

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 155/311 (49%), Gaps = 19/311 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFT--LSPPSI 77
           V+AIG FDG+HLGH  IL  A  +      + V+SF PHP T   + +P +   L+P   
Sbjct: 18  VLAIGKFDGVHLGHRAILNAARGLLTPEEWLAVMSFEPHP-TYALTGNPEYARWLTPRRE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++  ++G  A    +F           F+   LV  L V+ V+ G  FRFG+   G  
Sbjct: 77  RVRLFTELGVDAFYVARFDRAFQQLEPAAFVDGYLVP-LRVRHVVVGPDFRFGRGGQGTV 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+  G + GF    +  +  +  +I SSS IR  L +G V  A  LLG  + +  +V+
Sbjct: 136 DVLRDLGRERGFDVQVVQPVEEHGHKI-SSSRIREHLREGRVEAAQALLGRPYVVSGEVV 194

Query: 198 HGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYS-----GVANFGRNPTMV 251
           HG+K GRT+GFPTAN+  +   +L K GVYA     ++          GV N G  PT V
Sbjct: 195 HGDKRGRTIGFPTANLGGIDAYVLPKAGVYAAFVEVEEAHHTCSAHAFGVLNAGYRPT-V 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL-- 309
                 LE  + DF  ++YG+   VSF   +R E KF+ +E LK  +  D + AR ++  
Sbjct: 254 DGRAFQLEVHLLDFDGDLYGKTLRVSFLRRIRDETKFESLEALKAQIARDCEVARALVGL 313

Query: 310 ----ESSYPLS 316
               ++  PLS
Sbjct: 314 SSGAQAERPLS 324


>gi|268685833|ref|ZP_06152695.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626117|gb|EEZ58517.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 319

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|194097683|ref|YP_002000723.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae NCCP11945]
 gi|193932973|gb|ACF28797.1| Riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           NCCP11945]
          Length = 318

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTTVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 255 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|296840723|ref|ZP_06863291.2| riboflavin biosynthesis protein RibF [Neisseria polysaccharea ATCC
           43768]
 gi|296840167|gb|EFH24105.1| riboflavin biosynthesis protein RibF [Neisseria polysaccharea ATCC
           43768]
          Length = 306

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFINRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSSCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|296120982|ref|YP_003628760.1| riboflavin biosynthesis protein RibF [Planctomyces limnophilus DSM
           3776]
 gi|296013322|gb|ADG66561.1| riboflavin biosynthesis protein RibF [Planctomyces limnophilus DSM
           3776]
          Length = 369

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 20/296 (6%)

Query: 20  GVVAIGNFDGIHLGHH----LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           G VAIGNFDG+H GH     L+ ++A ++   +    ++F+PHP  +++ S      +PP
Sbjct: 74  GFVAIGNFDGVHRGHQAMMALLAQRARELGGRA--LAMTFDPHPWELLRPSG-----APP 126

Query: 76  SIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           S+       ++L++ G   ++  + T E    SA  F Q++++E L+ + +I G  F FG
Sbjct: 127 SLMTLEHRVELLKRYGADEVLVCRTTHELLKLSASDFFQQIIIETLDARGLIEGPNFFFG 186

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           ++R G+  +L++  EK G     +  +     Q+VSSS IR+ L  G +  A  LLG+ +
Sbjct: 187 REREGNITLLKQLCEKAGLSLDIVPPILV-ADQLVSSSVIRSLLGAGQMKEAVDLLGHPY 245

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V  G + GRT+GFPTAN+   P+++   GVY+ R R     SY    + G NPT 
Sbjct: 246 QISGVVGTGMQRGRTIGFPTANLTQCPNLIPAHGVYSGRVRL--DRSYPAAIHIGPNPTF 303

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                  +E  I DF+ ++YGQ  +V     +R   KF D E L   +  D ++AR
Sbjct: 304 GEQES-KIEVHILDFAGDLYGQMLSVDLQARIRGVTKFADKEALLAQLHRDCQEAR 358


>gi|301062685|ref|ZP_07203303.1| riboflavin biosynthesis protein RibF [delta proteobacterium NaphS2]
 gi|300443208|gb|EFK07355.1| riboflavin biosynthesis protein RibF [delta proteobacterium NaphS2]
          Length = 308

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 173/319 (54%), Gaps = 19/319 (5%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSF 55
           M +  ++E INQ+  N     V+ IGNFDG+H GH     L  ++A  I+  S   V++F
Sbjct: 1   MSIISDLEQINQTFRNP----VLTIGNFDGVHKGHLRLFDLTKKRAAAISGQS--AVMTF 54

Query: 56  NPHP-RTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +PHP R +   + P + TL+   ++  ++   G   +    FT + A+ SA+ FI+ +LV
Sbjct: 55  DPHPIRVMKPGNGPRLITLTDQKLE--LITAAGMDIIFCLPFTRQFASISAQDFIRDILV 112

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             + +K ++ G  + FG  RAG   ILQ  G+   F    +  +    + +VSS++IRT 
Sbjct: 113 NKIGIKEIVVGYDYSFGAGRAGGIEILQDMGKDLHFQVHVVPPVYVEDT-LVSSTSIRTL 171

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           + +G +  A  LLG  + +   V+ G+ + GR LG+PTAN+ L  +++ K GVY ++   
Sbjct: 172 VQEGKLHEAKKLLGRDYQVGGTVVKGKNRGGRLLGYPTANLALIDELVPKNGVYVVKVLV 231

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           + +T Y GV N G NPT   +G   +E+ I +F + + G++  + F + LR E  F+ +E
Sbjct: 232 EGRT-YDGVTNVGYNPTF-GDGVFSVETHILNFQENLLGKQIRIKFVERLRDEKTFQSVE 289

Query: 293 KLKIYMGEDEKKARKILES 311
            L   +  D  +A +IL +
Sbjct: 290 DLVAQIERDIVRAIEILTA 308


>gi|254526979|ref|ZP_05139031.1| riboflavin biosynthesis protein RibF [Prochlorococcus marinus str.
           MIT 9202]
 gi|221538403|gb|EEE40856.1| riboflavin biosynthesis protein RibF [Prochlorococcus marinus str.
           MIT 9202]
          Length = 307

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 157/292 (53%), Gaps = 5/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++   + +  L  P  +  I
Sbjct: 16  IAIGSFDGLHAGHRQLIKSVVEENQYTP-TIASFWPHPREVLYKETRL-RLDLPYEKLSI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F +E +  SAE+F++ +L+  L+ K +  G  F+FG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDMELSKLSAERFVRDILINQLQAKNISVGANFKFGFRRSGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K  +           L + + +I SSS IR  L K  + NA  +L   ++    V+ G+ 
Sbjct: 134 KIIKDTDIRLKITQILEDGEGRI-SSSRIRDLLEKSDLKNAFKILKRPYSFNGKVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLLLE 259
           IG+++G+PTAN+++     L  EGVYA     ++    +  V N G  PT+ P  P  +E
Sbjct: 193 IGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNQKFESVMNLGSQPTINPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + +   ++YG   +V   + LR +IKFKDI++L   + +D   A KI ++
Sbjct: 253 VHLINKDIDLYGLNLSVEPVEKLRSQIKFKDIDQLSNQIKKDRDNALKIFKN 304


>gi|161869381|ref|YP_001598548.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis 053442]
 gi|161594934|gb|ABX72594.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           053442]
          Length = 318

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 15/301 (4%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPR---TIIQSSSP 68
           P+   G  V IGNFDG+HLGH  IL++    A+    P+ V+ F P P+    +     P
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTGRMP 82

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  F
Sbjct: 83  PCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDDF 142

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  L
Sbjct: 143 RFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKKL 196

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+FG
Sbjct: 197 LGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASFG 255

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + A
Sbjct: 256 FNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEAA 315

Query: 306 R 306
           +
Sbjct: 316 K 316


>gi|119356211|ref|YP_910855.1| riboflavin kinase / FMN adenylyltransferase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353560|gb|ABL64431.1| FMN adenylyltransferase [Chlorobium phaeobacteroides DSM 266]
          Length = 321

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 8/288 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG+FDG+H GH  I+ +   IA +  +   V++F PHPR ++ +S+    L   ++ E
Sbjct: 29  VTIGSFDGVHRGHRSIIARMNAIARSRQLRSVVVTFEPHPRRVLSASASPSPLVLSTLDE 88

Query: 80  KI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           K+  L  +    L   +FT   A  S+E FI  VLV+ L  K++I G    FG++R G  
Sbjct: 89  KVALLTSLDVDLLFVIRFTDAFAARSSEDFIVGVLVKLLCAKSIIVGYDHGFGRNRTGSS 148

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L   G+++GF    I E++       SS+ IR  L  G++ +A   LGY + +   V+
Sbjct: 149 ETLLHLGKEFGFDVEAITEVKIGNEHF-SSTRIRKLLESGNLSDANQFLGYSYIVSGTVV 207

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            G++ GRT+GFPT N++ S P  LL   GVY       D  SY  + N G  PT+     
Sbjct: 208 GGDQRGRTIGFPTVNIKPSDPQKLLPHSGVYLAMIEL-DGISYKAMMNIGVRPTVSQGNE 266

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             +E+ I  FS E+YG   +     Y+R E KF  I++LK  + +D+K
Sbjct: 267 KTVEAHIPGFSGELYGAFLSFRLLVYIREEKKFATIDELKEQLEKDKK 314


>gi|325127583|gb|EGC50506.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis N1568]
          Length = 306

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 15/301 (4%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPR---TIIQSSSP 68
           P+   G  V IGNFDG+HLGH  IL++    A+    P+ V+ F P P+    +     P
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTGRMP 70

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  F
Sbjct: 71  PCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  L
Sbjct: 131 RFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKKL 184

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+FG
Sbjct: 185 LGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASFG 243

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + A
Sbjct: 244 FNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEAA 303

Query: 306 R 306
           +
Sbjct: 304 K 304


>gi|291288284|ref|YP_003505100.1| riboflavin biosynthesis protein RibF [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885444|gb|ADD69144.1| riboflavin biosynthesis protein RibF [Denitrovibrio acetiphilus DSM
           12809]
          Length = 305

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 154/295 (52%), Gaps = 6/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V++IGNFDG+HLGH  I+ + +++A +      +++F+PHP     +   +   +  
Sbjct: 14  KNMVISIGNFDGVHLGHASIVRRIVELAKDRGFESGLVTFDPHPMRFFGADVDLLQTTEM 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +E   EK+G   L    F  E A+     F+++ L++ +    ++ G  +RFG++R G
Sbjct: 74  KAEE--FEKLGVDKLFLLSFNKEIASIDPSVFVREFLIKKMMASFIVVGYDYRFGRNRQG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               LQ  GEK GF  + + ++  +     SS+NIR  L +G    AA LLG  + +  +
Sbjct: 132 SYEFLQIMGEKLGFTALRVSKVVVD-GVTASSTNIRKFLKEGKPETAAKLLGRNYVMRGE 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+ +   +GFPTAN+ +  +++   G+Y+      D   + G    G  PT+   G 
Sbjct: 191 VVRGDGLATKIGFPTANINVQNELIPANGIYSSIVHI-DGKQHIGALYIGDRPTVADAGN 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +E  +FDFS+ +YG+   V   +++R + KF ++++L   + ED K  R + E
Sbjct: 250 RRVEVNVFDFSENLYGKVIDVEVVNFIRKDSKFSNVDELIKNISEDCKNIRVLFE 304


>gi|59800531|ref|YP_207243.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA 1090]
 gi|59717426|gb|AAW88831.1| putative riboflavin kinase / FMN adenylyltransferase [Neisseria
           gonorrhoeae FA 1090]
          Length = 319

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVVFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|300780972|ref|ZP_07090826.1| riboflavin biosynthesis protein RibF [Corynebacterium genitalium
           ATCC 33030]
 gi|300532679|gb|EFK53740.1| riboflavin biosynthesis protein RibF [Corynebacterium genitalium
           ATCC 33030]
          Length = 330

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 16/313 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + +P  LK  VV IG FDG+H GH +++ +A++ A  +  P  V++F+PHP  +      
Sbjct: 19  EDIPADLKDPVVTIGVFDGVHRGHQMLINRAVEHAQAAGVPSVVMTFDPHPVAVFAPDQT 78

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L P + + +++  +G   ++   FT E A  S E++ + V+V  L    V+ G  F 
Sbjct: 79  PPVLLPLAERARLIADLGVDYMLVIDFTRELAGESPEEYFESVIVNKLHASRVVVGENFT 138

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    +   GEKY      +  L +  ++I S+S IR+AL  G V  AA  LG 
Sbjct: 139 FGAGASGTAQTMLALGEKYRVDVDVVSLLFDGSARICSTS-IRSALRDGDVAGAAEFLGR 197

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS--------- 237
            F+I + V  G  + GR LG+PTAN  ++    +  +GVYA  F   D +          
Sbjct: 198 EFSITAPVERGAGRGGRELGYPTANQYVADTGAVPGDGVYAGWFTVLDSSPLDGDMEPGI 257

Query: 238 -YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+   + G NPT   +    +ESF+ D   ++Y +   V F   +R  +KF  +++L  
Sbjct: 258 RYAAAISVGTNPTF-GDDRRSVESFVLDRDADLYDRLARVEFIAKVRDMVKFDSVDELLE 316

Query: 297 YMGEDEKKARKIL 309
            M  D  + R IL
Sbjct: 317 NMARDVARVRDIL 329


>gi|325569962|ref|ZP_08145921.1| riboflavin biosynthesis protein RibF [Enterococcus casseliflavus
           ATCC 12755]
 gi|325156929|gb|EGC69098.1| riboflavin biosynthesis protein RibF [Enterococcus casseliflavus
           ATCC 12755]
          Length = 319

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 151/288 (52%), Gaps = 9/288 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  ++E   KIA      + +++FN HP  + Q   P  +  L+  +
Sbjct: 23  VLVLGFFDGVHLGHQKVIETGRKIAEEKGLKLALMTFNQHPSIVFQKVDPEKMQYLTSLA 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E  +EK+G   L   +FT   AN + + F+ + ++  L  K V+ G  + +GK    +
Sbjct: 83  QKEAHMEKLGVDILYIIEFTSAFANLAPQVFVDEYMI-GLHAKVVVAGFDYTYGKKEIAN 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L    E   F  V + +   ++ + VSS+ IR+AL  G +     LLGY +  E  V
Sbjct: 142 MALLPTYAENR-FEVVTVAQESFDEEK-VSSTRIRSALQNGDMAQVNRLLGYIYEFEGTV 199

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GR LGFPTAN+++   + L KEGVY    +  D+  Y  + + G N T      
Sbjct: 200 VHGDARGRELGFPTANIKVKSTVRLPKEGVYVTEIKVGDKW-YPSMGSIGHNDTFGQGRQ 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           L +E +I DF Q+IYG+   + +  +LR ++ F   + L   + +DE+
Sbjct: 259 LTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFNGAQALIEQLKQDER 306


>gi|254671608|emb|CBA09293.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha153]
          Length = 318

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 15/301 (4%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPR---TIIQSSSP 68
           P+   G  V IGNFDG+HLGH  IL++    A+    P+ V+ F P P+    +     P
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTGRMP 82

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  F
Sbjct: 83  PCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDDF 142

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           RFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  L
Sbjct: 143 RFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKKL 196

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+FG
Sbjct: 197 LGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASFG 255

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + A
Sbjct: 256 FNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEAA 315

Query: 306 R 306
           +
Sbjct: 316 K 316


>gi|265767430|ref|ZP_06095096.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_16]
 gi|263252735|gb|EEZ24247.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_16]
          Length = 313

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 9/309 (2%)

Query: 7   IEINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII 63
           ++I +++P  L    VA IG FDG+H+GH  ++EQ  ++A    +   +++F  HPR ++
Sbjct: 1   MQIIRNIPGVLPEPCVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIHPRKVM 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            +      L+    +  +LE  G        FT E ++ +A +F+  +L +   V+T++ 
Sbjct: 61  NADYRPELLTTSEEKLALLEGTGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRVQTLVI 120

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG +R+       + G + G   +       +   I SSS IR  L +G V  AA
Sbjct: 121 GYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDDLHI-SSSVIRKMLHQGEVDRAA 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGV 241
             LGY + ++  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+   T D  +Y+G+
Sbjct: 180 RCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLVPADGVYAVHV-TFDGHTYNGM 238

Query: 242 ANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            N G  PT + NGP   +E  I  F  +IY +   +SF  YLRPE+KF  IE L   + +
Sbjct: 239 LNIGTRPT-IGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIAQLHQ 297

Query: 301 DEKKARKIL 309
           D      +L
Sbjct: 298 DAADVEALL 306


>gi|47569086|ref|ZP_00239775.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9241]
 gi|47554248|gb|EAL12610.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9241]
          Length = 335

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVVGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D+  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHDEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|239998199|ref|ZP_04718123.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|240117201|ref|ZP_04731263.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID1]
          Length = 306

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|254382102|ref|ZP_04997464.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Mg1]
 gi|194341009|gb|EDX21975.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Mg1]
          Length = 315

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 9/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PHP  +++  S 
Sbjct: 2   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPSVVVTFDPHPSEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  AL+   FT E +  S   FI KVLV+ L  + VI G  FR
Sbjct: 62  PPILAPYDRRAELMAGLGVDALLILPFTAEFSQLSPADFIVKVLVDKLHARAVIEGPNFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ---IVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L++ G  Y +    +D +   ++      SS+  R  + +G +  AA +
Sbjct: 122 FGHKAAGNVDFLRELGGTYDYEVDVVDLVERGEAGGGVPFSSTLARRLVAEGDMDGAAEI 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA  + T D        + 
Sbjct: 182 LGRPHRVEGVVVRGAQRGRELGYPTANVETRPHTAIPADGVYA-GWLTADGERMPAAISV 240

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G N          +E++  D    ++YG+  TV F  Y+R   KF+ ++ L   + +D K
Sbjct: 241 GTN-IQFDATDRTVEAYAIDRIGLDLYGKHVTVDFLAYVRGMAKFESLDGLLEAIADDVK 299

Query: 304 KARKILES 311
           +AR + E+
Sbjct: 300 RARVLTET 307


>gi|78779751|ref|YP_397863.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9312]
 gi|78713250|gb|ABB50427.1| FMN adenylyltransferase / riboflavin kinase [Prochlorococcus
           marinus str. MIT 9312]
          Length = 307

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 155/292 (53%), Gaps = 5/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  ++E  I+    +P T+ SF PHPR I+   + +  L  P  +  I
Sbjct: 16  IAIGSFDGLHAGHRKLIESVIEENQYTP-TIASFWPHPREILYKETRL-RLDLPEEKLPI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F  + +N SAE F++ +L+  L+ K +  G  F+FG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDKKLSNLSAESFVRDILINQLQAKNIFVGANFKFGYRRSGDVNTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              +           L +N+ +I SSS IR  L  G + NA  +L   ++   +V+ G+ 
Sbjct: 134 NTIKNMDIKLKITPILEDNEGRI-SSSRIRDLLLNGDLKNAYKILNRPYSFNGNVVRGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLLLE 259
           IG+ +G+PTAN+++     L  EGVYA     ++       V N G  PT+ P  P  +E
Sbjct: 193 IGKRIGWPTANLEIDGRKFLPGEGVYAAWTIIENSNQKIPSVMNLGSQPTINPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + + +  +YG   +V   + LR +I+F+++++L   + ED   A K+ ++
Sbjct: 253 VHLINKNMNLYGLNLSVEPVEKLRSQIQFQNVDQLSNQIKEDRDYALKVFKN 304


>gi|288800592|ref|ZP_06406050.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332805|gb|EFC71285.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 312

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 11/303 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           L+  V  IG FDG+HLGH  +L+Q ++ A+    T   ++F+ HPR ++Q +     +SP
Sbjct: 13  LQPSVATIGFFDGVHLGHQHVLKQVVEHAHRRQWTSIAITFDVHPRVVVQPNFTPELISP 72

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + +++   G        F+ E A  SA  F+Q +L E L V+ +I G   RFGK   
Sbjct: 73  LEEKLQLISNTGVDLTAVLPFSTEMAQLSAFHFMQTILKEQLNVQQLIIGYDNRFGKQSG 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  + G + G   +        + + VSSS IR  L  G V     LLG   +   
Sbjct: 133 ETFEDYVRFGAELGIEVLLSTPFDTPQGR-VSSSTIRKKLHNGDVNVVQQLLGRPHSFLG 191

Query: 195 DVIHGEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMV 251
            V+HG + GR LGFPTAN+  Q    I+ KEGVYA++   +     Y+G+ N G  PT  
Sbjct: 192 KVVHGYQEGRKLGFPTANIKPQYDTTIVPKEGVYAVQLELSGSHKRYNGMLNIGNRPTY- 250

Query: 252 PNGPL--LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             G     +E  IFDF++EIY     V F + +R E+KF  IE+LK  +  D+ +  +IL
Sbjct: 251 --GTFNQTIEVHIFDFNEEIYNSEVRVFFIERVRDEVKFSSIEQLKEQLIADKARIEQIL 308

Query: 310 ESS 312
           +++
Sbjct: 309 KAT 311


>gi|268594052|ref|ZP_06128219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|268602891|ref|ZP_06137058.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268547441|gb|EEZ42859.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|268587022|gb|EEZ51698.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|317163486|gb|ADV07027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 319

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|325661688|ref|ZP_08150311.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331084719|ref|ZP_08333807.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471941|gb|EGC75156.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330410813|gb|EGG90235.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 304

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 12/287 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V +G FDG+H GH  ++ +    A+   ++V+ +F+  P            ++     
Sbjct: 16  AAVTLGKFDGLHRGHQKLVSRVKAHASKEVVSVVFAFDMAPLYERLGKQKKSLMTGKERY 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E +  +  +  LI   FT E +   AE FI++VLV+      +  GT F FG ++ GD  
Sbjct: 76  EHLDGQTDY--LIDCPFTEEISGMEAETFIKEVLVDQFHAAYIAVGTDFHFGHEKRGDIH 133

Query: 139 ILQKRGEKYGFHTVFID-ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           +L++    YG+    +D EL   +   +SS+ I+  +  GH+  A  LLGY + +   V 
Sbjct: 134 MLKQYAGIYGYELEVVDKELYQGRE--ISSTYIKEEVRAGHMEVARELLGYPYAMSGVVE 191

Query: 198 HGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           HG K+GR LG PT  M ++PDI       GVYA R R  D   Y G+ N G  PT+  +G
Sbjct: 192 HGRKLGRKLGIPT--MNITPDIGKLAPPNGVYACRVRI-DGNYYQGIGNLGNKPTVDADG 248

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            L+LE  +F F +E YGQ   V    ++RPE KF  +E+LK  M  D
Sbjct: 249 KLILEVNVFSFDRETYGQTIQVELLSFVRPERKFASVEELKSQMEAD 295


>gi|220927914|ref|YP_002504823.1| riboflavin biosynthesis protein RibF [Clostridium cellulolyticum
           H10]
 gi|219998242|gb|ACL74843.1| riboflavin biosynthesis protein RibF [Clostridium cellulolyticum
           H10]
          Length = 311

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 157/291 (53%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V +GNFDG+H+GH  ++   I+ +  N     V +F  H   I++       L   S + 
Sbjct: 19  VGLGNFDGLHIGHMALINTLIRESKLNGLSSVVYTFTRHTENILRKKLITPLLLTESKKI 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L +     L   +F    +  S E+F+ K+L   L +K  + G  +RFG    GD  +
Sbjct: 79  ELLSETTLDYLYLDEFNEAFSRMSPEEFVIKILKSKLNIKLAVAGHDYRFGYKGEGDIPL 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G+KYGF  V I  +  + ++I+SS++IR ++  G++  A  LLG  ++I ++V++G
Sbjct: 139 LEQFGKKYGFKVVVIPPITCD-NEIISSTSIRQSIINGNLETAYKLLGRNYSIIAEVVNG 197

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            ++G T+GFPTAN+     ++L   GVY  +        Y+ + N G NPT        +
Sbjct: 198 RRVGNTIGFPTANIHPEKYLVLPHNGVYITKTLLNGHL-YNSMTNVGYNPTFEDVQQKTI 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E+ I DF Q+IYG++  V F   +R E KF ++E+L I + +D + AR  L
Sbjct: 257 ETHIMDFHQDIYGEKIEVFFLKKIRDEKKFSNVEELIIQITKDMRVARDYL 307


>gi|167901639|ref|ZP_02488844.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei NCTC 13177]
          Length = 330

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + Y +   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYSKLVRVEFLKKLRDEAKFVDLETLSRA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|329936648|ref|ZP_08286355.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseoaurantiacus M045]
 gi|329303878|gb|EGG47761.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseoaurantiacus M045]
          Length = 317

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 153/306 (50%), Gaps = 9/306 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVERARELGVPTVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  A++   FT E +  S   F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDAVLVLPFTKEFSKLSPADFVVKVLVDKLHAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L ++G  Y F    +D     ++   +  SS+  R  + +G +  A  +
Sbjct: 128 FGHKAAGNVAFLTEQGRTYDFEVEVVDLYVRGEAGGGEPFSSTLTRRLVAEGDMTGAREI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      ++   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHVGEEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R +  F  +E L   M +D  
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFQSYVRGQATFDSLEALMAQMAQDVD 305

Query: 304 KARKIL 309
             R++L
Sbjct: 306 HCRRLL 311


>gi|145224605|ref|YP_001135283.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium gilvum PYR-GCK]
 gi|145217091|gb|ABP46495.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium gilvum
           PYR-GCK]
          Length = 307

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 21/309 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDG+H GH  ++ +A+K   +   P  +++F+PHP  ++   S    L+  + +
Sbjct: 1   MVTIGVFDGVHRGHQELIGRAVKAGRSRGVPTVLMTFDPHPMEVVFPGSHPAQLTTLTRR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++E+MG    +   FT +    + E+++ ++LVE L V  V+ G  F FGK  AG+  
Sbjct: 61  AELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVERLHVVEVVVGDNFTFGKKAAGNVE 120

Query: 139 ILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +L+K G+++GF       + E   +++   SS+ IR+ +  G ++ A   LG    +E  
Sbjct: 121 LLRKAGDRFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAGDMVAAEEALGRPHRVEGV 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ----------TSYSGVA 242
           V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F                 Y    
Sbjct: 181 VVRGDGRGRDLGFPTAN--VAPPMYAAIPADGVYAAWFTVLGHGPVVGTVTPGERYQAAV 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NPT        +E+F+ D   ++YGQ   V F   LR + KF  +  L   M  D 
Sbjct: 239 SVGTNPTF-SGRTRTVEAFVLDTEADLYGQHVAVDFVARLRGQEKFGSVADLITAMEGDT 297

Query: 303 KKARKILES 311
           ++AR IL +
Sbjct: 298 ERARTILSA 306


>gi|331006485|ref|ZP_08329786.1| Riboflavin kinase [gamma proteobacterium IMCC1989]
 gi|330419710|gb|EGG94075.1| Riboflavin kinase [gamma proteobacterium IMCC1989]
          Length = 320

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 155/315 (49%), Gaps = 23/315 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
            HNI      P H  G VV IG FDG+HLGH  IL+Q ++ A     P  V+ F P P  
Sbjct: 16  LHNIR-----PKH-HGNVVTIGAFDGVHLGHQAILQQVVEQARERQLPSLVMIFEPQPHE 69

Query: 62  IIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                     L    ++EKI  L   G   +    FT   +   A+ FIQ +L+E L  +
Sbjct: 70  FFSGEKAPARLM--RLREKITALFDSGIDRVFCLPFTHWLSQLPADDFIQHILIEHLGTQ 127

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQIVSSSNIRTAL 174
           +++ G  F+FG+ R G+  +L+  GEK  F      T  +D+ R      VSS+ IR  L
Sbjct: 128 SLVIGDDFQFGRQRQGNYALLKAAGEKADFAVTDTATYLVDDKR------VSSTRIREML 181

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
                 +   LLG  +TI   V+ G+++GR LG PTAN+ L        GV+ ++     
Sbjct: 182 ELAAFDSIDILLGKPYTISGKVVKGQQLGRELGAPTANVHLHRYRSPLSGVFVVKTLLDS 241

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GVAN G  PT+  +   +LE  +FD + ++YGQ  TV F   +R E +F  +E L
Sbjct: 242 GELLPGVANVGVRPTVSGDTKPILEVHLFDRNDDLYGQIITVEFVHKIREEKRFDSLEHL 301

Query: 295 KIYMGEDEKKARKIL 309
           +  + +D ++AR+ L
Sbjct: 302 REQIQKDIQQARQWL 316


>gi|320120342|gb|EFE28417.2| riboflavin biosynthesis protein RibF [Filifactor alocis ATCC 35896]
          Length = 304

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 11/299 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII--QSSSPIFTLSPPS 76
           VV IGNFDG+H GH  ++E+ ++I+   N    V ++  HP   +  +    +FT     
Sbjct: 11  VVTIGNFDGLHRGHLKLMERTLEISKQKNLKSVVFTYENHPLEYVLKKKVEKLFTNRERD 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L+++G   ++   F  E    S   FIQ++L++ L  K ++ G    FGK R G 
Sbjct: 71  AK---LKELGIDTILSVPFDEEIMGMSTNDFIQEILIDKLHTKYLVLGEDAHFGKGREGS 127

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +Q  G + G  TV I  L       +SSS IR  + KG V  A   LG  F I  +V
Sbjct: 128 AECIQSVGSQLGL-TVEIIPLFFEDGVRISSSYIRQLIKKGKVDVAKEYLGRMFAITGEV 186

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTM-VPNG 254
           IHG++ GR LGFPTAN+      +L   GVY        +  Y G  + G NPT+ + N 
Sbjct: 187 IHGKENGRKLGFPTANISYDEHTVLPALGVYNTIVEYHGK-HYIGATSVGYNPTISLLNN 245

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            + LE  I DF +EIYG+  TV F   +R E+KF  +E+LK  + +DE   RK  +  Y
Sbjct: 246 RISLEVHILDFEKEIYGEEITVRFISKIRDEMKFNSLEELKNQISKDEILIRKQHDEKY 304


>gi|269837290|ref|YP_003319518.1| riboflavin biosynthesis protein RibF [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786553|gb|ACZ38696.1| riboflavin biosynthesis protein RibF [Sphaerobacter thermophilus
           DSM 20745]
          Length = 331

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 8/299 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VV IGNFDG+H GH  +L+Q +  A +   ++ L+F+P P  +++       L+    + 
Sbjct: 18  VVTIGNFDGVHRGHQYLLKQVVDRATDGARSLALTFDPLPAEVLRPDRAPKRLTTTDDRL 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             + + G   +    FT + A   A +F+++ LV+       + G  FRFG DR G   +
Sbjct: 78  TFMAETGLDVIAVVPFTRDFAALEAREFVEQ-LVDAAHPVHFVVGADFRFGHDRTGSADL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G +YGF    ++ +   +   +SS+ IR  L +G V  AA LLG   T+   V  G
Sbjct: 137 LRELGPEYGFAVTVVERIGGEE---ISSTRIRQLLAEGDVKAAAELLGRWHTLTGRVESG 193

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLL 257
              GR LGFPTAN+ + P + +  +G+YA     +    +   +   G  PT       +
Sbjct: 194 AGRGRNLGFPTANLAIPPALAIPADGIYAAHAALERGGDWLPALVYIGTRPTFS-EVDRV 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           +E F+ DF+ ++YG   TV F + +R ++ F+  E L   M  DE  AR+IL    P+S
Sbjct: 253 VEVFLLDFTGDLYGSEVTVRFIERIRGDMTFESPEALTEQMHADEVAARRILAEFEPMS 311


>gi|255011546|ref|ZP_05283672.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           3_1_12]
 gi|313149372|ref|ZP_07811565.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138139|gb|EFR55499.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 313

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 160/319 (50%), Gaps = 23/319 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + HNI      P      V  IG FDG+H GH  +++Q  ++A    +   +++F  H
Sbjct: 1   MQIIHNIPAFTPEPC-----VATIGFFDGVHTGHRFLIKQVRELAAARGLRSALITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++++      L+ P  +  +LE+ G        FT E +  +A +F+  +L +   V
Sbjct: 56  PRKVMKADYRPELLTTPEEKRTLLEETGVDYCFMLDFTQEVSRLTAREFMSDLLRDRYRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTA 173
           +T++ G   RFG +R+       + G + G   +       D+L       VSSS IR  
Sbjct: 116 QTLVIGYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDDLH------VSSSVIRKM 169

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFR 231
           L +G V  A+  LGY + ++  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+   
Sbjct: 170 LHQGEVDMASRCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVHV- 228

Query: 232 TQDQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           T D  +Y+G+ N G  PT + NGP   +E  I  F   IY +   +SF  YLRPE+KF  
Sbjct: 229 TFDGRTYNGMLNIGTRPT-IGNGPERSIEVNILHFHSNIYDKFIRISFVKYLRPELKFDG 287

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I+ L   +  D      +L
Sbjct: 288 IDGLIAQLHRDAADVEALL 306


>gi|328885412|emb|CCA58651.1| Riboflavin kinase or FMN adenylyltransferase [Streptomyces
           venezuelae ATCC 10712]
          Length = 322

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 153/307 (49%), Gaps = 9/307 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
            +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S  
Sbjct: 9   DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPCVVVTFDPHPSEVVRPGSHP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+P   + +++  +G  A++   FT E +  S   FI KVLV+ L  K VI G  FRF
Sbjct: 69  PLLAPHHRRAELMAGLGVDAVLVLPFTAEFSQLSPADFIVKVLVDKLHAKAVIEGPNFRF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHLL 186
           G   AG+   L + G  Y +    ID   +  +      SS+  R  + +G +  AA +L
Sbjct: 129 GHRAAGNVAFLTELGATYDYEVEVIDLYVSGSAGGGDPFSSTLTRRLVAEGDMTGAAEIL 188

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG 245
           G    +E  V+ G + GR LGFPTAN++  P   +  +GVYA  + T          + G
Sbjct: 189 GRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYA-GWLTAAGERMPAAISVG 247

Query: 246 RNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            NP         +E++  D    ++YG    V F +Y+R  +KF  ++ L   M  D K+
Sbjct: 248 TNPQF-DGTERTVEAYAIDREGLDLYGLHVAVDFLEYVRGMLKFDTLDDLLEAMAGDVKR 306

Query: 305 ARKILES 311
            R++ E+
Sbjct: 307 CRELTEA 313


>gi|325131482|gb|EGC54189.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis M6190]
 gi|325137587|gb|EGC60168.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           ES14902]
          Length = 306

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|121634248|ref|YP_974493.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis FAM18]
 gi|254804337|ref|YP_003082558.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha14]
 gi|120865954|emb|CAM09691.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis FAM18]
 gi|254667879|emb|CBA03970.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha14]
          Length = 318

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 255 GFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|319950923|ref|ZP_08024800.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dietzia
           cinnamea P4]
 gi|319435416|gb|EFV90659.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dietzia
           cinnamea P4]
          Length = 329

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 154/306 (50%), Gaps = 18/306 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN---SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           G  VA+G FDG+H GH  ++++A+        SP+ V +F+PHP  +++  +    L+P 
Sbjct: 25  GTSVALGVFDGLHRGHRALVDRAVGAGRELGASPVLV-TFDPHPVEVVRPGTHPSVLTPL 83

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++    G  A+    F  E A++  ++F+ +VLV  L+ + V  G  F FG+  AG
Sbjct: 84  PRRAELAGGFGVEAVFALPFDREMASWEPDEFVDRVLVSGLDARAVTVGRNFTFGRRAAG 143

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               ++    + G     +D L +   + VSSS IR  L++  V  AA +LG    +   
Sbjct: 144 TPQTMRALCAERGIACEVVDLLESG-GETVSSSRIRRLLSESDVAAAAEILGRPHRVSGV 202

Query: 196 VIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT----------SYSGVAN 243
           V+HG  + GR LG+PTAN+ L     +  +GVYA  F   D             Y+   +
Sbjct: 203 VVHGAGRGGRDLGYPTANLDLPEHTAVPADGVYAGWFTVLDDGPVDGSIVPGRPYASAIS 262

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT   +    +E+F+ D S ++YG+   V F D++R   KF  +++L + M  D +
Sbjct: 263 VGTNPTF-GDAARSVEAFVLDESADLYGRTAAVDFVDHVRDMEKFSSVDELLVAMDRDVR 321

Query: 304 KARKIL 309
           + R +L
Sbjct: 322 RTRTVL 327


>gi|89900226|ref|YP_522697.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodoferax
           ferrireducens T118]
 gi|89344963|gb|ABD69166.1| riboflavin kinase / FMN adenylyltransferase [Rhodoferax
           ferrireducens T118]
          Length = 322

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 152/323 (47%), Gaps = 32/323 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRT 61
           FH+ ++ Q+         + IGNFDG+H GH   L L +        P   ++F PHPR 
Sbjct: 7   FHHPDVAQAC-------ALTIGNFDGVHRGHQAMLALLKGEAQQRGVPSCAMTFEPHPRD 59

Query: 62  IIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
              ++S    L+P  I   ++K+  L   G    +   F    A  S + FI +VLV+ L
Sbjct: 60  YFAAASHQPDLAPARIGTLRDKLADLALSGVDQTVILPFDARLAGLSPQAFIDEVLVKGL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRT 172
             K V+ G  FRFG  RAGD  +L   G   GF     D  R N  ++    VSSS +R 
Sbjct: 120 GAKYVLVGDDFRFGAKRAGDYALLDAAGVAQGF-----DVARMNSYEVHGLRVSSSAVRE 174

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL +G + +AA LLG  + I   V+HG K+GR LGF T N++ +       G++ +    
Sbjct: 175 ALGQGRLQDAARLLGRPYRISGHVVHGRKLGRALGFRTLNLRFAHWKPAASGIFVVLVHG 234

Query: 233 QDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLR 283
                 +GVAN G  P++ P     G +LLE+   D+   +     YG+   V     L 
Sbjct: 235 LSPAPLAGVANMGIRPSLDPRDVNGGRVLLETHCLDWPDTLGPEGAYGKIIRVELLHKLH 294

Query: 284 PEIKFKDIEKLKIYMGEDEKKAR 306
            E+K+  ++ L   + +D   AR
Sbjct: 295 DELKYDSLDALTAGIAQDCLDAR 317


>gi|116669991|ref|YP_830924.1| FMN adenylyltransferase / riboflavin kinase [Arthrobacter sp. FB24]
 gi|116610100|gb|ABK02824.1| FMN adenylyltransferase / riboflavin kinase [Arthrobacter sp. FB24]
          Length = 327

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 158/319 (49%), Gaps = 27/319 (8%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ-SSSPI 69
           +P      VV  GNFDG+H GH  +L Q I+ A  N +    ++F+PHP  + +  S+P 
Sbjct: 11  VPADFGPTVVTFGNFDGVHRGHQQVLSQLIRTARLNGARAVAVTFDPHPAQVHRPESAPE 70

Query: 70  FTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             +    +++K+  L ++G  A++  K++LE A+ + E+F+  VLV  L+   V+ G   
Sbjct: 71  LIMG---LEDKLVALGELGLDAVLVMKYSLELASLTPEEFVAGVLVGSLKASHVVIGHDA 127

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDEL---------RNNKSQIVSSSNIRTALTKGH 178
           RFG+  +GD   +Q+ GEK+GF    I E             K +  SS+ +R AL  G 
Sbjct: 128 RFGRGNSGDLSTMQELGEKFGFTVQVISEFGSEGFPIHDDGGKDRRCSSTWVREALRDGD 187

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS 237
           V  A  +LG    +  +V+HG   GR LGFPTAN+   +   +  +G+YA     Q  T 
Sbjct: 188 VATAGAVLGRPHRMRGEVVHGAARGRALGFPTANLASEASGYIPADGIYAGWLVDQAGTR 247

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKD 290
           +    + G NPT   +G    +E+ + D  +E      +YGQ   V F   LR  + ++ 
Sbjct: 248 WPAAISVGSNPTF--DGVSRQVEAHVIDRPEEPVENFDLYGQTVVVEFVARLRGMVAYRG 305

Query: 291 IEKLKIYMGEDEKKARKIL 309
            E L   M  D  +A  IL
Sbjct: 306 PEALVEQMRLDVVQAHDIL 324


>gi|325125982|gb|ADY85312.1| Riboflavin kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 312

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 164/311 (52%), Gaps = 13/311 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPSFAKGRFDIKVVPKQIFAGEK---IGSAEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D + Y  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-SWYQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L   +  
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSEQLKL 298

Query: 301 DEKKARKILES 311
           D+  ++    S
Sbjct: 299 DQVASKNYFSS 309


>gi|291558567|emb|CBL37367.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SSC/2]
          Length = 312

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M   HN E  Q         VVA+G FDG+H GH LI ++ I+         V SF+  P
Sbjct: 1   MEYIHNTEQFQ-----FHNTVVALGKFDGMHKGHQLIFDELIQYKQLGYQAAVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++    +  +   + + K+L + G    I + FT E ++ S E F+ KVL+E   +K
Sbjct: 56  LNMLKHKH-MRVIYTTNEKIKLLARRGIDIYIEHPFTDEFSHLSPEDFVIKVLLEKTGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L   + +IVSS+ IR  L++G V
Sbjct: 115 VLVVGDDCGFGYKRQGNVELLERMSKEYDFKLIVIPKLEL-EGEIVSSTRIRHLLSEGKV 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  L+   F I   V+HG  +G   L  PTAN + L   +L   GVY  R   +D+T 
Sbjct: 174 EEANRLMEDPFMICGSVVHGNHMGAEVLQMPTANQIPLEDKLLPPNGVYVSRIHYKDETY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I DF + IY +   V    + RPE+KF  +E L   
Sbjct: 234 Y-GISNVGVKPTIEGKKHMGVETYILDFHKNIYHKEIEVELLCFKRPEMKFDSLESLSQQ 292

Query: 298 MGEDEKKARKILESSY 313
           M ED + AR+  +  Y
Sbjct: 293 MHEDAEFARRYAKEHY 308


>gi|254508943|ref|ZP_05121050.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus 16]
 gi|219548118|gb|EED25136.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus 16]
          Length = 288

 Score =  148 bits (374), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 148/285 (51%), Gaps = 16/285 (5%)

Query: 30  IHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +HLGH  +L Q  + A     P TV++F+P P  +    +    L+    +   L K+  
Sbjct: 1   MHLGHQAVLRQVSEKARELGLPATVMTFDPQPLELFAKENAPARLTRLRDKFVQLSKLDI 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
           + L+   F  + AN +A++FI  +LV  L VK ++ G  F FG+ R G+  +L++ G+K+
Sbjct: 61  ARLLCVNFNHQFANQTADEFISDLLVTRLGVKFLVVGDDFCFGRGREGNFAMLKEAGKKF 120

Query: 148 GF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
           GF     H+  + +LR      VSS+ IR AL +  +  AA +LG  ++I   V HG K+
Sbjct: 121 GFEVVSTHSFCLQKLR------VSSTAIREALAQDKLDAAARMLGRDYSISGRVSHGRKL 174

Query: 203 GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLLLESF 261
           GRT+GFPTAN+ L   +    GVY ++          GVAN G  PT+  NG    LE  
Sbjct: 175 GRTIGFPTANIPLKRSVSPVSGVYVVQALGLGDRPVGGVANIGNRPTV--NGVRQQLEVH 232

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +FDF   +YG++  +     LR E KF   + LK  +  D + AR
Sbjct: 233 LFDFHANLYGKQLEIVLLHKLRDEHKFDSFDALKQQIELDAEAAR 277


>gi|300865567|ref|ZP_07110346.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Oscillatoria sp. PCC 6506]
 gi|300336439|emb|CBN55496.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Oscillatoria sp. PCC 6506]
          Length = 399

 Score =  148 bits (374), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 150/291 (51%), Gaps = 34/291 (11%)

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFI 108
           TV++F+PHP+    S  P   L+P  ++EKI  L  MG   L+   F  E A  + +QF+
Sbjct: 110 TVVTFSPHPQEFF-SGKPRKMLTP--LREKIALLRSMGVEQLVLLPFNKELAALTPKQFV 166

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +++LV  LE   +  G  F FG+ R G    L      YG     +  L     + +SSS
Sbjct: 167 EQILVRQLEATRISVGLDFCFGRGRTGTAKDLAAIAATYGIDVTLV-PLYTYAGERISSS 225

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYA 227
            IR AL  G++  A  LLG  +++   VI G+KIGRT+GFPTAN+QL P+  L   GVYA
Sbjct: 226 AIRDALQNGNLQKANQLLGRPYSVGGVVIEGQKIGRTIGFPTANLQLPPEKFLPRFGVYA 285

Query: 228 IR----------------FRTQDQT------SYS----GVANFGRNPTMVPNGPLLLESF 261
           +R                F+ + +T      S++    GV N G  PT+    P  +E  
Sbjct: 286 VRVTLEEETEEEASGAGKFKLRPKTINLTPKSFNPPILGVMNIGCRPTVEGVSP-TVEVH 344

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + D+S ++YG+   VS  ++LRPE KF  +E LK  +  D   ARK+L S+
Sbjct: 345 LLDYSGDLYGKTLNVSLENFLRPEQKFPSLEALKAQIQSDCAFARKLLYSN 395


>gi|319649516|ref|ZP_08003672.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398678|gb|EFV79360.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 316

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 168/319 (52%), Gaps = 15/319 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           +H+ H   +++++   L    +A+G FDG+HLGH  ++ +A  IA    +   V++F+PH
Sbjct: 4   IHINHPHRMDRTV---LPEMAIALGYFDGVHLGHQKVIREAKSIAEQKGLKSAVMTFDPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +S   +  ++P   +  I+  +G   L    FT E AN   ++F+ + L+  L 
Sbjct: 61  PSVVLGKSVQHVEYITPLEDKIAIMADLGIDYLFIINFTWEFANLLPQEFVDQYLIG-LN 119

Query: 118 VKTVITGTKFRFGK-DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            K V+ G  + +G+  R     +L    +++ +  V      + K   +SS+ IR  + +
Sbjct: 120 AKHVVAGFDYSYGRMGRGTMETLLFHSRDQFDYSVVAKLAKEDEK---ISSTLIRKYIRE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G       LLG  +     VIHG+K GRT+GFPTAN+ +S D ++   GVYA+RF   D 
Sbjct: 177 GKTAELPDLLGRYYKTSGTVIHGDKRGRTIGFPTANVDVSDDCIIPPPGVYAVRFLV-DG 235

Query: 236 TSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           + Y GV N G  PT          +E  IFDFS +IYG++ TV +  +LR E KF  +++
Sbjct: 236 SWYEGVCNVGYKPTFNKEKGDRPSVEVHIFDFSSDIYGRKVTVEWHKHLRNERKFAGVQE 295

Query: 294 LKIYMGEDEKKARKILESS 312
           L   + +D+++  +  E +
Sbjct: 296 LIAQIAKDKQQTEQYFEKN 314


>gi|315641137|ref|ZP_07896216.1| riboflavin biosynthesis protein RibF [Enterococcus italicus DSM
           15952]
 gi|315483145|gb|EFU73662.1| riboflavin biosynthesis protein RibF [Enterococcus italicus DSM
           15952]
          Length = 312

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 11/292 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  ++E   KIAN     + V++FN HP  + Q  +P  +  L+   
Sbjct: 21  VLVLGFFDGVHKGHQKVIETGRKIANQRGLKLAVMTFNQHPSIVFQKINPDTMKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ + + G   L    FT   A    ++F+ + +V W   + V+ G  + +G KD A 
Sbjct: 81  QKEEKMAENGVDFLFFVDFTSAFAGLKPQEFVDQYIVGW-HAEVVVAGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              + +    ++   TV  + L   K   VSS+NIR AL+ G +     +LG  +  E  
Sbjct: 140 MPHLAEYAKNRFEIVTVPKETLAGEK---VSSTNIREALSNGEMEEVTAMLGTTYETEGI 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRTLG+PTAN+Q    + L KEGVY       D T +  + + G N T   N 
Sbjct: 197 VVHGDARGRTLGYPTANIQTKASVRLPKEGVYVTEILVGD-TWFPSMGSIGTNNTFEQNR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P+ +E  I DF Q+IYG+   V +  YLR ++ F  +E L   + +DEK  R
Sbjct: 256 PVTVEINILDFHQDIYGEHVRVRWVHYLREQVAFPSMEALIDQLQQDEKDTR 307


>gi|269215224|ref|ZP_05987968.2| riboflavin biosynthesis protein RibF [Neisseria lactamica ATCC
           23970]
 gi|269208000|gb|EEZ74455.1| riboflavin biosynthesis protein RibF [Neisseria lactamica ATCC
           23970]
          Length = 319

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 17/303 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPRTIIQS---SS 67
           P+  +G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    S    +
Sbjct: 24  PDFPQGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFASRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGVFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVGGGRFQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADMEA 315

Query: 305 ARK 307
           AR+
Sbjct: 316 ARR 318


>gi|326443788|ref|ZP_08218522.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
          Length = 314

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A   + P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELSVPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  A++   FT   +  S   FI KVLV+ L    V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDAVLILPFTAGFSQLSPADFIVKVLVDKLHACLVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG    L + G  Y +    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHRAAGTVDFLAELGTSYDYAVEVVDLYVSGAAGGGQPFSSTLTRRLVAQGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA  + T D        + 
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGYPTANVETLPHTAIPADGVYA-GWLTADGERMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R + KF  +++L + M +D K
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGQQKFASVDELLVAMADDVK 305

Query: 304 KARKI 308
           + R++
Sbjct: 306 QCREL 310


>gi|162447669|ref|YP_001620801.1| bifunctional FAD synthetase/riboflavin kinase [Acholeplasma
           laidlawii PG-8A]
 gi|161985776|gb|ABX81425.1| bifunctional enzyme, FAD synthetase / riboflavin kinase
           [Acholeplasma laidlawii PG-8A]
          Length = 297

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 162/301 (53%), Gaps = 26/301 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSIQEK 80
           + IGNFDG+H+GH  ++E+  K ++     V++F PHP ++I +   PI  L   S +E+
Sbjct: 19  LTIGNFDGLHIGHQNLIEKVKKFSDTKS-AVMTFFPHPMSVITNKELPI--LMDISDKER 75

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL---EVKTVITGTKFRFGKDRAGDR 137
            L+ M     +  +FT   +     +FI     EWL   +VK ++ G  F+FG   +G  
Sbjct: 76  ALKMMHVDIFMVVEFTKAFSKLEKLEFI-----EWLKSLQVKRIVVGRDFKFGHKGSGSV 130

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F  + +++L    ++ VS++ I+  L +G +  A  LL   ++I  +VI
Sbjct: 131 DDLKQH-----FEVLVVEDLLYKDTR-VSTTYIKLLLEQGDMKLARKLLNKSYSIHGEVI 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG+K+G+ +G+PTAN+      L K GVYA+     D+T Y G AN G NPT+  +    
Sbjct: 185 HGDKVGKMIGYPTANIDYKNHFLPKIGVYAVIVEIGDKT-YLGCANLGHNPTINYSTTRR 243

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           LE FI D+   +Y +  TVSF  YLR EIK+  +E +        ++ +K +E +Y L +
Sbjct: 244 LEVFIMDYDGNLYEKEITVSFEYYLRDEIKYDKVEAML-------EQIKKDVEQTYNLLK 296

Query: 318 R 318
           +
Sbjct: 297 K 297


>gi|325672782|ref|ZP_08152478.1| riboflavin biosynthesis protein RibF [Rhodococcus equi ATCC 33707]
 gi|325556659|gb|EGD26325.1| riboflavin biosynthesis protein RibF [Rhodococcus equi ATCC 33707]
          Length = 314

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 19/315 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S   
Sbjct: 1   MPADWGRCVLTIGVFDGVHRGHAQLISRAVDAARERGIPSVLMTFDPHPAEVVRPGSHPA 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++ E++G        FT E    S E+++ ++LVE L V  V+ G  F FG
Sbjct: 61  QLTTLPRRAELAEELGIDVFCVMPFTTEFMKLSPERYVHEILVERLHVSEVVVGENFTFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           +  AG+  +L++ G ++GF    ++ L  + +   SS+ IR+ +  G V  AA  LG   
Sbjct: 121 RKAAGNVDLLRRTGARFGFAVDGVNLLAEH-AVTFSSTYIRSCVDAGDVAAAAEALGRPH 179

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRF----------RTQDQTS 237
            +E  V+HG+  GR LGFPTAN  ++P +   +  +GVYA  F            +    
Sbjct: 180 RVEGVVVHGDGRGRGLGFPTAN--IAPPMYSAIPADGVYAAWFTVLGPGPVEGTVEPGKR 237

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+   + G NPT        +E+F+ D   ++YGQ   V F   +R   KF  +E L   
Sbjct: 238 YAAAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDFVQRVRGMEKFDSVEALIEE 296

Query: 298 MGEDEKKARKILESS 312
           MG D +KAR IL  +
Sbjct: 297 MGRDAEKARAILAEA 311


>gi|327382592|gb|AEA54068.1| FAD synthase [Lactobacillus casei LC2W]
 gi|327385790|gb|AEA57264.1| FAD synthase [Lactobacillus casei BD-II]
          Length = 315

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 9/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++  + I +A   P+ V++FN HP  + +  S + I  L    
Sbjct: 21  VLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLYTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KI++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK     
Sbjct: 81  EKIKIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLVG-LKADTVVAGFDYTYGKRDVAS 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L K      F  + + EL  N  Q VSS+ IR AL    +  A   LGY +T    V
Sbjct: 140 MALLPKYACGR-FDVISVPELAEN-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTAGKV 197

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   +  
Sbjct: 198 VHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGADRD 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R
Sbjct: 257 VTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVR 307


>gi|46198467|ref|YP_004134.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB27]
 gi|46196089|gb|AAS80507.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB27]
          Length = 294

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 19/290 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L QA+  A   + P+ V +F+P  +   +    +  L+     
Sbjct: 15  VVAVGSFDGVHLGHQYLLRQALAEAKALHQPLLVYTFDPPTKVFTRGEGFLMDLT----- 69

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L  +G   ++   F    A   AE+F++ +    L    +  G  FRFG+ R GD
Sbjct: 70  EKVEALRALGVELILAVPFNETFARRPAEEFLEDL--RTLGASRIYVGEDFRFGRGRGGD 127

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +           +  L     + V SS IR  L +G V  A HLLG  +     V
Sbjct: 128 PEALAR------VAPTRVVPLLALGGEPVKSSRIRALLQEGRVEEARHLLGRPYGAYGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + GEK+GR L FPTAN+ + P  +L  GVYA+     D   Y GVAN G  PT+   G  
Sbjct: 182 VEGEKLGRRLSFPTANLAVHPLKVLPPGVYAVE-AMGDFGRYKGVANVGTRPTL-GGGER 239

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LE  +  F+ E+YG+   + F  +LR E +F+ +E LK  + +D   AR
Sbjct: 240 RLEVHLLGFAGELYGEEVRLLFLKHLRQERRFESLEALKAQIAQDVAAAR 289


>gi|159903858|ref|YP_001551202.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9211]
 gi|159889034|gb|ABX09248.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9211]
          Length = 305

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 5/291 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  ++++        P TV+SF PHPR ++   S +  L  PS +  
Sbjct: 15  AIALGSFDGLHAGHKRVIKEITNSDKGVP-TVVSFWPHPREVLYGESRL-RLDLPSEKGA 72

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE +G   L+   F    A  +AE+F  +VL+  L+ K +  G  FRFGK+R GD  +L
Sbjct: 73  LLETLGVKQLVLVPFDHYLAELTAEKFFNEVLINKLQSKRIAVGANFRFGKNREGDPYVL 132

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +K  E        +  L + + ++ SSS IR+ L +G++     LLG  +     VI G+
Sbjct: 133 KKLCESADLELSIVPILEDAQGRM-SSSRIRSELKQGNLKATKDLLGRPYIFRGLVIPGK 191

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAI-RFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +G+T+G+PTAN+Q+    LL   GVYA    +   +  +  V N G  PT+ P  P  +
Sbjct: 192 GLGKTIGWPTANLQVDGRKLLPGIGVYAAWATKLNGKNKFPAVMNLGPQPTIDPLAPSAV 251

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + +   ++      +     +R + KFKD+  L   +G D K A++IL
Sbjct: 252 EVHLLNQEIDLTQNELIIEPVKRIRSQKKFKDLNTLSEQIGLDAKIAQEIL 302


>gi|309800245|ref|ZP_07694422.1| riboflavin biosynthesis protein RibF [Streptococcus infantis
           SK1302]
 gi|308116127|gb|EFO53626.1| riboflavin biosynthesis protein RibF [Streptococcus infantis
           SK1302]
          Length = 303

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 13/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + E A  IA      + +++FN  P+  +   SP  +  +   S
Sbjct: 20  VLVLGYFDGVHLGHQKLFEIASNIAAEKRQGVALVTFNESPKLTLNQYSPEHLLHILYAS 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G  +L    FT   AN +A++FI    V+  +  T++ G  +  G DR   
Sbjct: 80  ERERRLKRAGVESLYLMDFTSRVANMTAQEFID-TFVKEAKADTIVVGFDYTLGSDRK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   E +    V +  + + K +I SS+ IR A+ +G V  A   LG+       V
Sbjct: 137 --TAEDLKELFHGEVVIVPPVEDEKGKI-SSTRIRQAILEGDVKEAGKFLGFPLPTRGVV 193

Query: 197 IHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+GFPTAN+  L    +  +GVYA+    Q +  Y G+A+ G+N T      
Sbjct: 194 VHGNARGRTIGFPTANLVNLDRTYMPADGVYAVDVEIQRKV-YRGMASLGKNETF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              E  IFDFS +IYG+   VS+ D +R  +KF  +++L   + EDEK ARK
Sbjct: 252 ERFEVHIFDFSDDIYGETVIVSWLDRIRDMVKFDSVDQLVKQLEEDEKIARK 303


>gi|325129575|gb|EGC52399.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           OX99.30304]
 gi|325197663|gb|ADY93119.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis G2136]
          Length = 306

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVTVVFEPQPKEFFALRTGRM 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D + 
Sbjct: 243 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|116514291|ref|YP_813197.1| FAD synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|116093606|gb|ABJ58759.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 313

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 164/311 (52%), Gaps = 13/311 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQTFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPAFAKGRFDIKVVPKQIFAGEK---IGSAEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D + Y  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-SWYQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L   +  
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSEQLKL 298

Query: 301 DEKKARKILES 311
           D+  ++    S
Sbjct: 299 DQVASKNYFSS 309


>gi|323141200|ref|ZP_08076101.1| riboflavin biosynthesis protein RibF [Phascolarctobacterium sp. YIT
           12067]
 gi|322414343|gb|EFY05161.1| riboflavin biosynthesis protein RibF [Phascolarctobacterium sp. YIT
           12067]
          Length = 307

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 158/293 (53%), Gaps = 8/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G FDG+H GH  ++E A + A   NS + V +F+ HP   I+       L   + +
Sbjct: 18  VVALGTFDGLHRGHLDVIETAREKARECNSQLAVFTFSNHPFEWIRPGMVPSALITGAQK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++L+++G   L+   F  + A+ S ++F+Q++  + L+   ++ G  F +G    G   
Sbjct: 78  QELLQQLGVDVLVDIPFNQQVADLSPQEFLQRL--QQLDYSCLVVGANFTYGCRGQGTVY 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L       GF  + + EL +  + ++SS+ IR  +  G V  AA +LG  ++I   V H
Sbjct: 136 TLAASANAMGFELI-VRELVSEGATVISSTAIRHLIAAGEVAEAAAMLGRSYSISGTVAH 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G + GR LG+PTAN++L    +     GVYA+R     + +Y G+AN G NPT       
Sbjct: 195 GNERGRLLGYPTANIELEDAHVAVPLGGVYAVRVIVNGK-NYHGMANIGYNPTFGDVAQP 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            LE+ IFDF+ ++YG++ TV F   +R E+KF  IE+LK  + +D+      L
Sbjct: 254 RLETNIFDFTGDLYGKQLTVHFEQRIRGEVKFAGIEQLKQQLAQDKHDCEAAL 306


>gi|312898342|ref|ZP_07757732.1| riboflavin biosynthesis protein RibF [Megasphaera micronuciformis
           F0359]
 gi|310620261|gb|EFQ03831.1| riboflavin biosynthesis protein RibF [Megasphaera micronuciformis
           F0359]
          Length = 310

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 13/309 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+V+ ++E         +  V+A+G FDG+H+GH  ++E A+      + P  VL+F+ H
Sbjct: 1   MNVYDSLEAAAVC----RHAVIALGTFDGVHVGHRRVMETAMSEGKRLHVPTLVLTFSAH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +++        L+    +E+ +  +G   LI    T E  N S E F    L+++L  
Sbjct: 57  PLSVLNPLKEPARLATVEQKEEYIRSVGIDGLIMLPMTQELLNQSPEDFCA-CLIKYLAP 115

Query: 119 KTVITGTKFRFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTK 176
             ++ GT F +GK  AG+   ++Q  G+ +      +D +   +S   VSS+ IR  + K
Sbjct: 116 SEIVVGTNFTYGKKAAGNTETLVQSMGDAH-IPVRVLDLVEAPQSDYPVSSTVIRGLIAK 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G +  A  LLG  F + ++V+ G++ GRT+GFPTANM + P   L  +GVY       D 
Sbjct: 175 GEMQEAMTLLGRPFELRAEVVSGDRRGRTIGFPTANMLIPPKAALPPDGVYVTGV-VLDG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  + N G NPT        +E+ I D+S +IYG+  T+ F+  LR E KF  I +L 
Sbjct: 234 KEWPAMTNIGNNPTFT-RQYRRVETHILDWSGDIYGKTVTLRFYKRLRDEKKFSSITELV 292

Query: 296 IYMGEDEKK 304
             M  D+KK
Sbjct: 293 DAMKVDKKK 301


>gi|300788167|ref|YP_003768458.1| riboflavin kinase [Amycolatopsis mediterranei U32]
 gi|299797681|gb|ADJ48056.1| riboflavin kinase [Amycolatopsis mediterranei U32]
          Length = 310

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 16/303 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDG+H GH  ++ + +  A     P  +L+F+PHP  +++  S    L+    +
Sbjct: 1   MVTIGVFDGVHRGHQELISRTVAAAAERGLPSVMLTFDPHPSEVLRPGSHPAQLTTLRRK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I+E +G        FTLE +    E+F+ +VLV+ L    VI G  F FG   AGD  
Sbjct: 61  AEIVESLGVDVFCVLPFTLELSRLQPEEFVHEVLVDRLHAAAVIVGDNFTFGAKAAGDVE 120

Query: 139 ILQKRGEKYGFHTVFIDELRN------NKSQIV-SSSNIRTALTKGHVLNAAHLLGYRFT 191
           +L+  G ++GF   F  EL+       ++S I  SS+ +R+ +  G V+ AA  LG    
Sbjct: 121 LLRTLGRRFGF-AAFGAELQGKELSEEDQSAITFSSTYVRSCIDAGDVVAAAEALGRPHR 179

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRF-RTQDQT-SYSGVANFGRN 247
           +E  V+ G+  G  LG+PTAN+  +P    +  +GVY+  F R+ D         + G N
Sbjct: 180 LEGIVVRGDGRGHELGYPTANLS-TPRFAAVPADGVYSAWFTRSADPARRLRAAVSVGTN 238

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+F+ D  ++ YGQ   + F   LR +++F D   L   + +D  + RK
Sbjct: 239 PTF-SGRERTVEAFVLDVDEDFYGQHVAIDFVTRLRDQVRFADSAGLVAQIDDDVVETRK 297

Query: 308 ILE 310
            LE
Sbjct: 298 ALE 300


>gi|268319267|ref|YP_003292923.1| riboflavin kinase / FAD synthetase [Lactobacillus johnsonii FI9785]
 gi|262397642|emb|CAX66656.1| riboflavin kinase / FAD synthetase [Lactobacillus johnsonii FI9785]
          Length = 312

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 165/300 (55%), Gaps = 9/300 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI 69
           S P   K  ++ +G FDG+H+GH  +++ A  IA   N P+ V++F+ HP+ I ++    
Sbjct: 11  SAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKNLPLMVMTFDKHPKEIYKNDHKF 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +E+ +EK+G   L+  KFT E +  + + F+ +V+++ L+  TV+ G  + +
Sbjct: 71  VYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLTPQDFVDQVVIK-LKADTVVVGFDYTY 129

Query: 130 G-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           G KD A    + Q   +++    + ++  +      V S+ IR A+  G+V  AA LLG 
Sbjct: 130 GPKDIANVENLPQFAKDRF---KIVVEPKQAIDKIKVGSTYIRKAIQHGNVELAAELLGQ 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
            +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N
Sbjct: 187 PYETSGVIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKINGKW-HDAMTSVGYN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 246 ETFKTNHGLTIETNIFDFDEEAYGETLTLAWYKFIRKNKKFSGIEELSHQLDQDKRDIKQ 305


>gi|254181496|ref|ZP_04888093.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1655]
 gi|184212034|gb|EDU09077.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1655]
          Length = 330

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAGD   L+  GE++ F    ++ L +     +SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGARRAGDFASLKAAGERFRFEVEQMETLADADGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R        
Sbjct: 176 DLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|88801806|ref|ZP_01117334.1| riboflavin biosynthesis protein RibF [Polaribacter irgensii 23-P]
 gi|88782464|gb|EAR13641.1| riboflavin biosynthesis protein RibF [Polaribacter irgensii 23-P]
          Length = 344

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 159/297 (53%), Gaps = 11/297 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  ILE+ +  A  +     +L+F PHPR ++Q  + I  ++    + 
Sbjct: 52  VTIGTFDGVHFGHQKILEKLVFEAKQAGKKSVLLTFFPHPRMVLQKDAKIEMINTIHERS 111

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LEK G   LI + F+   +  +A +F++  LV  L +  +I G    FGK+R G+   
Sbjct: 112 ALLEKTGLDYLIIHPFSKAFSKTTALEFVRDTLVNKLNISKLIIGYDHHFGKNREGNITQ 171

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L +    Y F    ++E+  ++     +SS+ IR AL  G +  A   LGY F +   V+
Sbjct: 172 LTEHSLVYNFT---VEEILAQDIDDVSISSTKIRQALISGSLKTANKYLGYPFMLNGIVV 228

Query: 198 HGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +G+++G  +G+PTAN+ +  +  ++ K GVY ++   Q++  + G+ N G  PT+  N  
Sbjct: 229 NGKQLGGKIGYPTANIDIKETYKLIPKAGVYVVKSNIQNKIIF-GMMNIGCRPTVDGNHQ 287

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E   FDF+Q++YG+  TV    +LR E KF  I  L   + +DE  AR  ++ +
Sbjct: 288 -TIEVHFFDFNQDLYGKHLTVELLYFLRDEHKFDAIPLLIAQLKKDEDTARDYIKDN 343


>gi|254423413|ref|ZP_05037131.1| riboflavin biosynthesis protein RibF [Synechococcus sp. PCC 7335]
 gi|196190902|gb|EDX85866.1| riboflavin biosynthesis protein RibF [Synechococcus sp. PCC 7335]
          Length = 359

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 161/342 (47%), Gaps = 69/342 (20%)

Query: 22  VAIGNFDGIHLGHHLIL------------------------------------------- 38
           +A+GNFDG+HLGH  ++                                           
Sbjct: 16  IALGNFDGVHLGHRQVMAGILGDDTSLAAMRSLTPQSVSALHKSITHQNSPWTEPTSIIT 75

Query: 39  --EQAIKIANNSPI-TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKI--LEKMGFSALIR 92
             E + +   + P+ TV++F PHP+      S P+ T     I EKI  L ++G   L+ 
Sbjct: 76  STETSFQAPKSGPLATVVTFKPHPQEYFSGISRPLLT----PIAEKIWQLSQLGIKQLVL 131

Query: 93  YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
             F    +  S E F++++LVE L  + +  G  FRFGK R+G    L+     +     
Sbjct: 132 LPFNQALSELSPEDFVEQILVEGLNAQRISVGNDFRFGKGRSGSADGLRAIAASHNIPVT 191

Query: 153 FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
            +  L+  +   +SSS IR AL  GH   AA LLG  +T+   V+ G+++GRT+GFPTAN
Sbjct: 192 QVS-LKYEQGDRISSSRIREALQNGHPETAARLLGRPYTLTGKVVKGKQLGRTIGFPTAN 250

Query: 213 MQL-SPDILLKEGVYAIRFRTQDQTSYS-----------GVANFGRNPTMVPNG-PLLLE 259
           +++ S   L + GVY++R      T+ S           GV N G  PT+  NG  L +E
Sbjct: 251 LKVPSNKYLPRTGVYSVRVYGVSSTNRSGATSKNDRVLNGVMNVGNRPTV--NGQSLSIE 308

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
             + D+  ++YGQ  TVS   ++R E KF+ IE+LK  +  D
Sbjct: 309 VHLLDWEGDLYGQLLTVSLEGFVRAEKKFESIEQLKGQIATD 350


>gi|270295414|ref|ZP_06201615.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D20]
 gi|270274661|gb|EFA20522.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D20]
          Length = 313

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 13/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++EQ   +A    +  +V++F  HPR ++Q+      L+    +
Sbjct: 16  VATIGFFDGVHRGHRYLIEQVCAVAAGRGLASSVVTFPVHPRKVMQADYHPKLLTTCDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L K G    +   FT E A  SA +F+  +L +  +++ ++ G   RFG +R+    
Sbjct: 76  VSLLAKTGVDYCMMLDFTPEIARLSAREFM-SILKDRYQIQALVVGYDHRFGHNRSEGFE 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQ-----IVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                G + G   +       +K        VSSS IR  L +G+V  AA  LGY F ++
Sbjct: 135 DYVHYGRELGMEVLLARAYSYSKEASVTEVTVSSSAIRGLLQEGNVSEAAEYLGYDFFLD 194

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G ++GR +GFPTAN+++S    ++  +GVYA+R   + +  Y G+ + G  PT+ 
Sbjct: 195 GTVVGGYQVGRKIGFPTANLRVSDSDKLIPCDGVYAVRVCVEGK-EYGGMLSIGYRPTL- 252

Query: 252 PNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            NGP   +E  IF F  +IY Q   +SF    RPE+KF  IE+L   +  DE + + IL
Sbjct: 253 ENGPDRSIEVHIFRFDADIYQQPMRLSFVRRTRPELKFDSIEELIAQLHRDEVEIKSIL 311


>gi|294815436|ref|ZP_06774079.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
 gi|294328035|gb|EFG09678.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
          Length = 351

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A   + P  V++F+PHP  +++  S 
Sbjct: 45  EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELSVPSVVVTFDPHPSEVVRPGSH 104

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  A++   FT   +  S   FI KVLV+ L    V+ G  FR
Sbjct: 105 PPLLAPHHRRAELMAELGVDAVLILPFTAGFSQLSPADFIVKVLVDKLHACLVVEGPNFR 164

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG    L + G  Y +    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 165 FGHRAAGTVDFLAELGTSYDYAVEVVDLYVSGAAGGGQPFSSTLTRRLVAQGDVAGAAEI 224

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA  + T D        + 
Sbjct: 225 LGRPHRVEGIVVRGAQRGRELGYPTANVETLPHTAIPADGVYA-GWLTADGERMPAAISV 283

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R + KF  +++L + M +D K
Sbjct: 284 GTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGQQKFASVDELLVAMADDVK 342

Query: 304 KARKI 308
           + R++
Sbjct: 343 QCREL 347


>gi|140910|sp|P22990|RIBF_PSEFL RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|151639|gb|AAA26021.1| protein X [Pseudomonas fluorescens]
          Length = 311

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 147/302 (48%), Gaps = 27/302 (8%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVELG--VPSCVVIFEPQP 58

Query: 60  RTIIQ-SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           R      ++P              E  G   ++   F     + SA +F+ ++LV+ L V
Sbjct: 59  REFFTPETAPARLALARQAATAGGE--GVDRVLCLAFNQRLRSLSAAEFVDRILVDGLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTA 173
           + +  G  F FG DR GD   LQ  G   GF      TV +D LR      VSS+ +R A
Sbjct: 117 QHLEVGDDFHFGCDRVGDFDFLQHAGVNQGFTVEAAQTVELDGLR------VSSTQVRNA 170

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L       A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     
Sbjct: 171 LAAADFDLAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI- 229

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D  S+ GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E 
Sbjct: 230 DGQSWPGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEA 289

Query: 294 LK 295
           LK
Sbjct: 290 LK 291


>gi|240015825|ref|ZP_04722365.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA6140]
          Length = 306

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 11  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVVFEPQPKEFFALRTGKT 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 70  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRHFSEISAQAFIDRLLRQTLNTRYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 130 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 184 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 243 GFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 302

Query: 305 AR 306
           A+
Sbjct: 303 AK 304


>gi|330996843|ref|ZP_08320712.1| riboflavin biosynthesis protein RibF [Paraprevotella xylaniphila
           YIT 11841]
 gi|329572286|gb|EGG53945.1| riboflavin biosynthesis protein RibF [Paraprevotella xylaniphila
           YIT 11841]
          Length = 314

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQ 64
           I +   LP   +  V  IG FDG+H GH  ++ Q  + A    +  L  +F  HPR ++Q
Sbjct: 4   ITLTDPLP--YQACVATIGFFDGVHRGHRFLIRQLTRYAVGHDLASLLVTFRTHPRQVMQ 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           ++     L+    +   L   G    +   FT   A  SA +F+ ++L E L VK ++ G
Sbjct: 62  AAYQPQLLTTYDEKCGQLATTGADYCLTLDFTTALAALSARRFMAEILKEKLSVKVLVIG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG DR+       + G + G   V  D    ++   VSSS +R  L +G V  AA 
Sbjct: 122 YDHRFGHDRSEGFAEYVEYGRELGMEVVRADVFAMSEVN-VSSSMVRACLAEGEVGIAAR 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQ---DQTSYS 239
            L   + I   V+HG  +G  LGFPTAN+Q+  S  ++ K GVYA+  + +   ++  + 
Sbjct: 181 CLTRPYEITGRVVHGFHVGHELGFPTANIQVEDSQKLIPKNGVYAVWVKGKIGGEEHVWG 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+ N G  PTM       +E  + DF+ ++YG R T+SF   LR E KF++  +L   + 
Sbjct: 241 GMLNIGLRPTMENGENRTIEVHLLDFAGDLYGCRLTLSFVRRLRDERKFRNKGELVHQLR 300

Query: 300 EDEKKARKIL 309
           EDE   R IL
Sbjct: 301 EDEAMVRMIL 310


>gi|167766528|ref|ZP_02438581.1| hypothetical protein CLOSS21_01034 [Clostridium sp. SS2/1]
 gi|317498928|ref|ZP_07957211.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711651|gb|EDS22230.1| hypothetical protein CLOSS21_01034 [Clostridium sp. SS2/1]
 gi|316893761|gb|EFV15960.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 312

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M   HN E  Q         VVA+G FDG+H GH LI ++ I+         V SF+  P
Sbjct: 1   MEYIHNTEQFQ-----FHNTVVALGKFDGMHKGHQLIFDELIQYKQLGYQAAVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++    +  +   + + K+L + G    I + FT E ++ S E F+ KVL+E   +K
Sbjct: 56  LNMLKHKH-MRVIYTTNEKIKLLARRGIDIYIEHPFTDEFSHLSPEDFVIKVLLEKTGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L   + +IVSS+ IR  L++G V
Sbjct: 115 VLVVGDDCGFGYKRQGNVELLERMSKEYDFKLIVIPKLEL-EGEIVSSTRIRHLLSEGKV 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  L+   F I   V+HG  +G   L  PTAN + L   +L   GVY  R   +D+T 
Sbjct: 174 EEANRLMEDPFMICGSVVHGNHMGAEVLQMPTANQIPLEDKLLPPNGVYVSRIHYKDETY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I DF + IY +   V    + RPE+KF  +E L   
Sbjct: 234 Y-GISNVGVKPTIEGKKHMGVETYILDFHKNIYHKEIEVELLCFKRPEMKFDSLESLSQQ 292

Query: 298 MGEDEKKARKILESSY 313
           M ED + AR   +  Y
Sbjct: 293 MHEDAEFARSYAKEHY 308


>gi|312139339|ref|YP_004006675.1| riboflavin kinase [Rhodococcus equi 103S]
 gi|311888678|emb|CBH47990.1| riboflavin kinase [Rhodococcus equi 103S]
          Length = 323

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 19/317 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
             +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S 
Sbjct: 8   DDVPADWGRCVLTIGVFDGVHRGHAQLISRAVDAARERGIPSVLMTFDPHPAEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++ E++G        FT E    S E+++ ++LVE L V  V+ G  F 
Sbjct: 68  PAQLTTLPRRAELAEELGIDVFCVMPFTTEFMKLSPERYVHEILVERLHVSEVVVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG+  AG+  +L++ G ++GF    ++ L  + +   SS+ IR+ +  G V  AA  LG 
Sbjct: 128 FGRKAAGNVDLLRRTGARFGFAVDGVNLLAEH-AVTFSSTYIRSCVDAGDVAAAAEALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRF----------RTQDQ 235
              +E  V+HG+  GR LGFPTAN  ++P +   +  +GVYA  F            +  
Sbjct: 187 PHRVEGVVVHGDGRGRGLGFPTAN--IAPPMYSAIPADGVYAAWFTVLGPGPVEGTVEPG 244

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y+   + G NPT        +E+F+ D   ++YGQ   V F   +R   KF  +E L 
Sbjct: 245 KRYAAAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDFVQRVRGMEKFDSVEALI 303

Query: 296 IYMGEDEKKARKILESS 312
             MG D +KAR IL  +
Sbjct: 304 EEMGRDAEKARAILAEA 320


>gi|53715626|ref|YP_101618.1| putative riboflavin kinase [Bacteroides fragilis YCH46]
 gi|52218491|dbj|BAD51084.1| putative riboflavin kinase [Bacteroides fragilis YCH46]
          Length = 313

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 9/309 (2%)

Query: 7   IEINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII 63
           ++I +++P  L    VA IG FDG+H+GH  ++EQ  ++A    +   +++F  HPR ++
Sbjct: 1   MQIIRNIPGVLPEPCVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIHPRKVM 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            +      L+    +  +LE  G        FT E ++ +A +F+  +L +   V+T++ 
Sbjct: 61  NADYRPELLTTSEEKLALLEGTGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRVQTLVI 120

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG +R+       + G + G   +       +   I SSS IR  L +G V  AA
Sbjct: 121 GYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDDLHI-SSSVIRKMLHQGEVDRAA 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGV 241
             LGY + ++  V+ G ++GR +GFPTAN+ +  S  ++  +GVYA+   T D  +Y+G+
Sbjct: 180 RCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDSDKLVPADGVYAVHV-TFDGHTYNGM 238

Query: 242 ANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            N G  PT + NGP   +E  I  F  +IY +   +SF  YLRPE+KF  IE L   + +
Sbjct: 239 LNIGTRPT-IGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIAQLHQ 297

Query: 301 DEKKARKIL 309
           D      +L
Sbjct: 298 DAADVEALL 306


>gi|294084714|ref|YP_003551472.1| FMN adenylyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664287|gb|ADE39388.1| FMN adenylyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 327

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 9/302 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            AIGNFDG+H GH  +++ A   A    +T  V++F+PHPR   +     F L+    ++
Sbjct: 28  AAIGNFDGVHRGHQKVIQAACIHAATHDLTPAVITFDPHPREFFRQDDIPFHLADRHEKD 87

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L ++    +I   F        A+ F+  +L   L V  +  G+ F FG  R GD   
Sbjct: 88  RLLGQLAVDQIIHVTFDDALRRTDAKVFVTDIL-PALGVVQLFAGSDFAFGHGRGGDIDT 146

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           + + G         +  L ++ S I+SSS IR AL  G   +AA +LG+ + I   V  G
Sbjct: 147 INEIGRMAHISATTVPLLVDDNSIIISSSRIRAALQAGAPEHAAAMLGHDWAISGIVQTG 206

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-----YSGVANFGRNPTMVPNG 254
           +K GRT+GFPTAN+ L   +    GVYA++    + TS      +GVAN G  PT     
Sbjct: 207 DKRGRTIGFPTANISLGNLLHPAFGVYAVQVFEDNGTSDGQFIANGVANIGIRPTF-ETR 265

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +L E+ +FD+  +IYG+R +V    +LR E KF  +E+LK+ + +D   AR+IL ++  
Sbjct: 266 DVLCETHLFDYDGDIYGRRLSVRLKSFLRAERKFSGLEELKVQIAKDAADARQILPATQK 325

Query: 315 LS 316
           ++
Sbjct: 326 IA 327


>gi|222151112|ref|YP_002560266.1| riboflavin kinase [Macrococcus caseolyticus JCSC5402]
 gi|222120235|dbj|BAH17570.1| riboflavin kinase [Macrococcus caseolyticus JCSC5402]
          Length = 317

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 153/297 (51%), Gaps = 13/297 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP-IFTLSPPSI 77
            +A+G FDGIH GH  ++E  I IA N  +   V++F+PHP  ++         L+P   
Sbjct: 20  ALAVGFFDGIHTGHQKVIETMICIAENKGLKKAVMTFDPHPSVVLNPEKQRTDYLTPMQE 79

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ ILE MG   L    FT   A      FI     +   VK V+ G  F +GK   G  
Sbjct: 80  KKHILETMGIDYLFIVPFTSSLAKMEEHDFISNYFTKN-HVKEVVAGFDFTYGK--YGKG 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+   +K GF+   + E      + VS+++IR  L  G + +    LG  + I   V+
Sbjct: 137 NMLKLEADKEGFNVTTV-ERHALADEKVSTTSIRKDLMHGDIESVNAQLGRPYKITGLVV 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--YSGVANFGRNPTM--VP 252
            GEK GRT+GFPTAN++ + + +L + GVYA+  +  DQT   Y GV N G  PT     
Sbjct: 196 QGEKRGRTIGFPTANVEPNENFVLPRLGVYAVTLKL-DQTGKIYKGVCNVGVKPTFHDPE 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              + +E  IFDF   IYG+R  + ++++LR E KF  I+ L   +  D+ +A +IL
Sbjct: 255 KQQVSIEVNIFDFKDSIYGERVEIEWYEFLRAEKKFDGIDSLIAQINADKAQAIEIL 311


>gi|304440005|ref|ZP_07399898.1| riboflavin biosynthesis protein RibF [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371497|gb|EFM25110.1| riboflavin biosynthesis protein RibF [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 306

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 162/307 (52%), Gaps = 12/307 (3%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP-RTI 62
           NI++N    + +   V+A+GNFDG+HLGH L++++AI+ A+  ++   VL FN H   T+
Sbjct: 5   NIDLNYIGKDEI---VIALGNFDGVHLGHRLLMKKAIETASKIDAHSAVLLFNEHTTATL 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                   T +   +    L+ +G   +    F  E    S E F++  LV+ L  K V+
Sbjct: 62  FDHKKKELTSNEAKLM--YLKGIGIDIVYMIDFNEEFMKMSPEYFVKNFLVKNLNAKGVV 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  +RFG    GD   L++  + Y      ID  + +  ++VSS+ IR A+++G +  A
Sbjct: 120 VGYDYRFGFKAMGDVESLRELCKDYNLTLDVIDAYKID-GEVVSSTRIREAISEGMMEEA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQ-DQTSYSG 240
             LLG+ + I   V HG+K+G  +G+PTAN+     + L  +GVY  R + + D   Y  
Sbjct: 179 NKLLGHNYFITGIVDHGKKLGSKMGYPTANIITKDGVQLPGDGVYDTRIKVEGDDLLYKA 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             + G NPT +    L +E+ I DF + IYG++  + F   LRP + F  +E+L   + +
Sbjct: 239 ATSIGNNPTFLGEN-LKIEANILDFDENIYGKKVYLYFLKKLRPMVVFNSVEELFERIAK 297

Query: 301 DEKKARK 307
           D ++ RK
Sbjct: 298 DVEEVRK 304


>gi|282856506|ref|ZP_06265781.1| riboflavin biosynthesis protein RibF [Pyramidobacter piscolens
           W5455]
 gi|282585627|gb|EFB90920.1| riboflavin biosynthesis protein RibF [Pyramidobacter piscolens
           W5455]
          Length = 306

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           +V IG FDG H GH  +  QA ++A   ++   +++F+PHPR ++    + +FTL   + 
Sbjct: 2   IVCIGAFDGYHRGHFSLFRQAREMAARAHTEWKIVTFSPHPRYVLGGLKARLFTLEDAAF 61

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             +  +       +   FT E A+     F+ ++    L V  ++ G +FRFG+DR+GD 
Sbjct: 62  LRRNFD---IPEPLEIPFTREFASTEPRLFLDELRAR-LGVTGIVVGREFRFGRDRSGDG 117

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +   + G     + +L  +   +VSS+ +R  +  G+V  AA LLGY + + S+V+
Sbjct: 118 EFLARYCAERGLELALMPQLVMDDGIVVSSTRVRDMVQAGNVDQAAELLGYPWFLFSEVV 177

Query: 198 HGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            GE+ GR +G+PTANM     +L+P     EGVYA          +    + GRNPT + 
Sbjct: 178 GGERRGRAMGYPTANMLPDEKKLTPG----EGVYAGAM-WHGGRWWPAAISVGRNPTFLV 232

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            G L +E+ +  F  ++YG+R  ++F   LR   +F     L   +  D ++ R++ ++S
Sbjct: 233 QGSLRIEAHVIGFHGDLYGRRPLLAFLKRLRLMTRFSGRMSLMKQLALDCEETRRVFDAS 292

Query: 313 YPL 315
            PL
Sbjct: 293 RPL 295


>gi|325290356|ref|YP_004266537.1| riboflavin kinase; FMN adenylyltransferase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965757|gb|ADY56536.1| riboflavin kinase; FMN adenylyltransferase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 310

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++A+GNFDG+HLGH  +LE   + A    +   VL F+PHP  I+     +  L+  
Sbjct: 13  KPSIIALGNFDGLHLGHRKLLEYGAEKAREMKVGLCVLLFDPHPFKILHPDKKLNLLTTT 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++  +MG   +   KFT E AN S ++F   ++ +   V  V+ G  + FG    G
Sbjct: 73  REKLRLFSEMGVEKVFLLKFTAEVANTSPKEFTCGIIKDLGAVHIVV-GFNYSFGARGVG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  G++ GF    I +    + +++SSS IR  L  G +++A  LLG    I   
Sbjct: 132 TPSDLESYGQECGFGVSVI-QAEKIEDRVISSSEIRRFLLNGEIISAKKLLGRWPGISGK 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HGEK GR LGFPTAN+    D+L+ K GVYA+      Q  + G+ N G  PT     
Sbjct: 191 VVHGEKRGRILGFPTANILPDEDLLIPKNGVYAVSSAIDGQKIW-GMMNIGYRPTFHSRP 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              +E    +F   +Y Q   +S  D LR E KF  +E++   + +D +    + ++S
Sbjct: 250 EKSIEIHFLNFEGNLYDQDLMISIHDRLRTEKKFSGVEEMIAQLNKDREAVITLYKTS 307


>gi|187778993|ref|ZP_02995466.1| hypothetical protein CLOSPO_02588 [Clostridium sporogenes ATCC
           15579]
 gi|187772618|gb|EDU36420.1| hypothetical protein CLOSPO_02588 [Clostridium sporogenes ATCC
           15579]
          Length = 303

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 161/291 (55%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  NN    VL+F  HP  TI +  +P   L  PS +
Sbjct: 15  IALGSFDGLHKGHMKLIKETKKMAKDNNGKSMVLTFKDHPLNTINKDLAPKILLDNPS-K 73

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KILE+ G   +    F  E      E FI+K+L  +      + G  +RFG    GD  
Sbjct: 74  AKILEEYGVDLVNFINFDKEYMELCPEDFIKKMLY-YYNAGGFVVGFNYRFGYKNLGDIE 132

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  A  +LG  + ++ D++
Sbjct: 133 LLNKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGDIV 191

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 192 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VQDKKL 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 250 NIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKHQLKKDKSFAKR 300


>gi|301055299|ref|YP_003793510.1| riboflavin biosynthesis protein C, C-terminal part [Bacillus
           anthracis CI]
 gi|300377468|gb|ADK06372.1| riboflavin biosynthesis protein C, C-terminal part [Bacillus cereus
           biovar anthracis str. CI]
          Length = 335

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 159/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   +++ L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYIID-LNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|254492975|ref|ZP_05106146.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           1291]
 gi|226512015|gb|EEH61360.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           1291]
          Length = 319

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI---ANNSPITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++   A   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADARGLPVVAVIFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|257865916|ref|ZP_05645569.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC30]
 gi|257872249|ref|ZP_05651902.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC10]
 gi|257875543|ref|ZP_05655196.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC20]
 gi|257799850|gb|EEV28902.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC30]
 gi|257806413|gb|EEV35235.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC10]
 gi|257809709|gb|EEV38529.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC20]
          Length = 319

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  ++E   KIA      + +++FN HP  + Q   P  +  L+   
Sbjct: 23  VLVLGFFDGVHLGHQKVIETGRKIAEEKGLKLALMTFNQHPSIVFQKVDPEKMQYLTSLP 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E  +E++G   L   +FT   AN + + F+ + ++  L  K V+ G  + +GK    +
Sbjct: 83  QKEAHMEQLGVDILYIIEFTSAFANLAPQVFVDEYMI-GLHAKVVVAGFDYTYGKKEIAN 141

Query: 137 RGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             +L    E ++   TV  +     K   VSS+ IR+AL  G +     LLGY +  E  
Sbjct: 142 MALLPTYAEGRFEVVTVAQESFHEEK---VSSTRIRSALQNGDMAQVNRLLGYIYEFEGT 198

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +  D+  Y  + + G N T     
Sbjct: 199 VVHGDARGRELGFPTANIKVKSTVRLPKEGVYVTEIKVGDKW-YPSMGSIGHNDTFGQGR 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF Q+IYG+   + +  +LR ++ F   + L   + +DE+
Sbjct: 258 QLTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFNGAQALIEQLKQDER 306


>gi|293397733|ref|ZP_06641939.1| riboflavin biosynthesis protein RibF [Neisseria gonorrhoeae F62]
 gi|291611679|gb|EFF40748.1| riboflavin biosynthesis protein RibF [Neisseria gonorrhoeae F62]
          Length = 319

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +    +
Sbjct: 24  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGKT 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 83  PPCRISPLRTKLELLEGTGCVDAAWVLRFDRHFSEISAQAFIDRLLRQTLNTRYLLVGDD 142

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 143 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIR------TSSTAVRQALSDGNLAYAKK 196

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 197 LLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVASF 255

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D + 
Sbjct: 256 GFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADMEA 315

Query: 305 AR 306
           A+
Sbjct: 316 AK 317


>gi|218767581|ref|YP_002342093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis Z2491]
 gi|121051589|emb|CAM07887.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis Z2491]
          Length = 318

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 17/302 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPR---TIIQSSS 67
           P+   G  V IGNFDG+HLGH  IL Q +++  ++   P+  + F P P+    +     
Sbjct: 23  PDFPHGAAVTIGNFDGVHLGHKHIL-QKLRLEADTRGLPVVAVVFEPQPKEFFALRTGRM 81

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   +SP   + ++LE  G   A+    F    +  SA+ FI ++L + L  + ++ G  
Sbjct: 82  PPCRISPLRTKLELLEGTGCVDAVWVLCFDRNFSEISAQAFIDRLLRQTLNTRYLLVGDD 141

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A  
Sbjct: 142 FRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYAKK 195

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA+F
Sbjct: 196 LLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVASF 254

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D + 
Sbjct: 255 GFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADMEA 314

Query: 305 AR 306
           A+
Sbjct: 315 AK 316


>gi|295696162|ref|YP_003589400.1| riboflavin biosynthesis protein RibF [Bacillus tusciae DSM 2912]
 gi|295411764|gb|ADG06256.1| riboflavin biosynthesis protein RibF [Bacillus tusciae DSM 2912]
          Length = 315

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 150/297 (50%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPI-FTLSPPSI 77
           V+A+G FDG+H+GH  IL Q    A     P  V   +PHPR ++   +     L+P   
Sbjct: 19  VMALGTFDGLHIGHQEILSQGKAEAKRRGVPFAVFLCDPHPRQVLGIGAEYDVLLTPLPE 78

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++LE  G   +    FT E A  + EQF+  +L+  L  + ++ G  + FG    GD 
Sbjct: 79  KLRLLEHYGADLVYILLFTREVAAVAPEQFVLDLLLP-LAPEVLVAGFDYTFGAGGKGDA 137

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+  GE      VFI    N   + VSSS IR  L  G V     LLG  + +   V+
Sbjct: 138 ALLKAMGETRAL-PVFILPPVNLYGEKVSSSLIREKLRYGEVKLVRELLGRPYALTGRVV 196

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLKEGVYAIR-FRTQDQTSYSGVANFGRNPTMVPNGP 255
            GE  G  +GFPTAN+QL+ P ++   GVY +R F   ++    G+ N G  PT    G 
Sbjct: 197 KGEGRGIGIGFPTANLQLNDPFLIPGTGVYLVRAFWGMEKGP--GLMNIGVRPTFHDRGT 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           L LE  + D   ++YG+   V F DYLRPE +F  +++L   + +D + AR +  ++
Sbjct: 255 LSLEVHLLDHRVDLYGEEMRVEFLDYLRPEQRFNSVDRLVAQIEQDVRTARDLWRTA 311


>gi|300173105|ref|YP_003772271.1| riboflavin biosynthesis protein RibF [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887484|emb|CBL91452.1| riboflavin biosynthesis protein RibF [Leuconostoc gasicomitatum LMG
           18811]
          Length = 316

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 168/297 (56%), Gaps = 11/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+HLGH  +++QA   A+    P+ VL+++P P  + +  + P+  L+  + 
Sbjct: 23  VVAMGFFDGVHLGHQAVIKQAKLEADKQGVPLAVLTYDPQPIVVFEMLTQPLRYLTSINQ 82

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA-GD 136
           +  +L  +G + +   +FT + A  + ++F+ +V++  L   TV+ G    +G D +  D
Sbjct: 83  KAALLADLGVNTMYVMQFTSQLAKLAPQEFVNQVIMR-LNPVTVVGGFDHVYGGDVSIAD 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +  +K  F+ V + EL  N +Q + SS+IR AL  G +      LG        V
Sbjct: 142 MDHLPQYAKKR-FNVVSVSELDVN-NQKIGSSSIRKALELGSMNIVNSQLGRIHQTTGLV 199

Query: 197 IHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           IHGE  GR LGFPT N++ +P++  L   G+YA++    D   + G+A+ GRN T     
Sbjct: 200 IHGEARGRELGFPTVNIK-TPELEWLPTIGIYAVKIMIGDDW-HLGMASIGRNITFGDAR 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P+ +E  I DF+Q++YG+  TV++++YLR E+KF +I +L   + +DE   R+  ++
Sbjct: 258 PITVEINILDFNQQVYGENVTVNWYNYLRGEVKFTNIPELVTQLKKDEIATRQYFDA 314


>gi|257869199|ref|ZP_05648852.1| riboflavin kinase/FAD synthetase [Enterococcus gallinarum EG2]
 gi|257803363|gb|EEV32185.1| riboflavin kinase/FAD synthetase [Enterococcus gallinarum EG2]
          Length = 312

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  ++E     A      + +++FN HP  + Q   P  +  L+  S
Sbjct: 21  VLVLGFFDGVHLGHQKVIETGKAAAKEKGLKLALMTFNQHPSIVFQKVDPEAMQYLTSLS 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E  +  +G   L    FT   AN + + F+ + +V  L  + V+ G  + +GK    +
Sbjct: 81  QKEAHMADLGVDYLYEVDFTSAFANLAPQVFVDQYMV-GLHAEVVVAGFDYTYGKKETAN 139

Query: 137 RGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             +L    + ++   TV  + L   K   VSS+ IR AL  G +  A  LLGY +  E  
Sbjct: 140 MALLPSYAQGRFEVITVPKETLAGEK---VSSTRIRAALQNGEMAEANRLLGYPYEFEGT 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +  D+  Y  + + G N T     
Sbjct: 197 VVHGDARGRELGFPTANIKVKSTVRLPKEGVYVTELKVGDRW-YPSMGSIGHNDTFGQGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            L +E +I DF Q+IYG+   + +  +LR ++ F   E L   + +DE   RK  +
Sbjct: 256 QLTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFSGAEALIEQLQQDEIDTRKYFD 311


>gi|317476415|ref|ZP_07935664.1| riboflavin biosynthesis protein RibF [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907441|gb|EFV29146.1| riboflavin biosynthesis protein RibF [Bacteroides eggerthii
           1_2_48FAA]
          Length = 308

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +   I   + LPN     V  IG FDG+H GH  ++EQ  + A    +  +V++F  H
Sbjct: 1   MQLHTEISGKELLPN-----VATIGFFDGVHRGHRFLIEQVCEAAAVRGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    +  +L   G    I   FT + A  SA+QF+  VL    +V
Sbjct: 56  PRKVMHPDFHSELLTTCDEKTALLADTGIDYCIMLDFTPDLARLSAKQFM-AVLKGDYQV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+ D     + G++ G   +      NN+   VSSS IR  L +G 
Sbjct: 115 QALVIGYDHRFGHNRSEDFDDYVRYGQELGMEVILAQAYSNNE-MTVSSSAIRHLLLEGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ +  S  ++  +GVYA+      + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDSEKLVPADGVYAVNVFL-GEA 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF F  +IY Q   +SF    RPE+KF  IE+L  
Sbjct: 233 KHTGMLSIGYRPTLNNGLDRSIEVHIFHFDADIYDQPMRISFIRRTRPELKFDSIEELIE 292

Query: 297 YMGEDEKKARKIL 309
            + +DE +   IL
Sbjct: 293 QLHKDEAEITAIL 305


>gi|167746751|ref|ZP_02418878.1| hypothetical protein ANACAC_01463 [Anaerostipes caccae DSM 14662]
 gi|167653711|gb|EDR97840.1| hypothetical protein ANACAC_01463 [Anaerostipes caccae DSM 14662]
          Length = 310

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 158/301 (52%), Gaps = 6/301 (1%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSS 67
           I+Q+         VA+G FDG+H GH LI +Q ++       TV+ SF+  P   ++S +
Sbjct: 4   IHQTENFQFHNSAVALGKFDGLHRGHQLIFDQLLEYKKQRYQTVVFSFDRPPVNTLKSEN 63

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
                S    +E++L K G   LI + FT E +  S   F+ +VL++ + +K ++ G   
Sbjct: 64  YHMIYSKEE-KERLLAKKGMDVLIEHPFTKEFSKLSPRDFVTEVLIKKVGMKILVVGDDC 122

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG  R G+  +L++  ++Y F  + I +L  N   IVSSS IR+ L +  +  A  LL 
Sbjct: 123 GFGYKRQGNVELLKEMQKEYDFKLIVIPKLELNGG-IVSSSRIRSLLREARIEEANSLLS 181

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG 245
             F +   V+ G  +G+  LG PTAN   +P+ LL   GVY  R   ++Q  Y G++N G
Sbjct: 182 SPFLVYGPVVQGNHMGKDILGVPTANQIPNPEKLLPPNGVYVSRITIKNQV-YYGISNIG 240

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E++I DF + IY +  +V    + RPE+KF+ ++ L   M ED   A
Sbjct: 241 VKPTIEGKKHMGVETYILDFDKNIYHKPISVELLCFKRPEMKFESLDCLSRQMKEDALFA 300

Query: 306 R 306
           R
Sbjct: 301 R 301


>gi|262202095|ref|YP_003273303.1| riboflavin biosynthesis protein RibF [Gordonia bronchialis DSM
           43247]
 gi|262085442|gb|ACY21410.1| riboflavin biosynthesis protein RibF [Gordonia bronchialis DSM
           43247]
          Length = 323

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 149/314 (47%), Gaps = 19/314 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      VV IG FDG+H GH  ++  A   A     P  +++F+PHP  +++  S   
Sbjct: 12  IPADWGRCVVTIGVFDGVHRGHAQLISAATSAARERGVPSVLMTFDPHPAEVVRPGSHPP 71

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++ E++G        FT   A  S + F   VLVE L    V+ G+ F FG
Sbjct: 72  QLTTLTRRAELAEELGIDVFCVMPFTPALAARSPKDFAHDVLVESLHAADVVVGSNFTFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K  AGD   L++ G K+GF    +  L    +   SS+ IR+ +  G V  AA  LG   
Sbjct: 132 KKAAGDVAKLRELGGKFGFEVQDV-SLFGEHAVTFSSTYIRSCVAAGDVELAAEALGRPH 190

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRF----------RTQDQTS 237
            +E  V+ G+  GR LG+PTAN  ++P +   +  +GVYA  F          + +    
Sbjct: 191 RVEGVVVRGDGRGRELGYPTAN--VAPPMHAAIPADGVYAAWFTVLGAGPVVGQVEPGER 248

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT        +E+F+ D S ++YGQ   V F   +R    F  ++ L   
Sbjct: 249 YQAAVSVGTNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVGRIRAMENFSSVDALLDA 307

Query: 298 MGEDEKKARKILES 311
           M  D +KAR IL +
Sbjct: 308 MAADVEKARAILSA 321


>gi|225181389|ref|ZP_03734833.1| riboflavin biosynthesis protein RibF [Dethiobacter alkaliphilus AHT
           1]
 gi|225167970|gb|EEG76777.1| riboflavin biosynthesis protein RibF [Dethiobacter alkaliphilus AHT
           1]
          Length = 310

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 150/295 (50%), Gaps = 6/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+GNFDG+HLGH  I+   +K A  + +   VL F+PHP +++        L     +
Sbjct: 19  VVALGNFDGVHLGHREIINTTVKTAKKHGAKSAVLIFSPHPLSVLAPDKAPALLMTMEDR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L ++G   +I + F  E A    E F  +VL   L V  V+ G  + FG+   G+  
Sbjct: 79  IHMLGQVGVDYVIVHPFNREFAGMPPESFATEVLHGKLGVSGVVVGFDYSFGRRGLGNPA 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+  GE+ GF TV +    +   + V S+ +R  L +G V  AA +LGY F +  +V+H
Sbjct: 139 ELKLLGERLGF-TVEVVNPVSVHGEPVGSTAVRKLLLEGRVEAAADMLGYPFYLRGEVVH 197

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+  GRTLGFPTAN+Q+  +I+    GVY  +    ++  ++ V N G+ PT     P  
Sbjct: 198 GDGRGRTLGFPTANLQVPCEIIRPAHGVYLTKALLGEERFWA-VTNVGKRPTFCKTEP-S 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +E  + D  + +YG    V F   +R E  F   E L+  +  D   AR I+  +
Sbjct: 256 VEVHLLDTQKNLYGHELMVEFIQKIREEKAFSGPEALRAQIRNDIDLARTIIAKA 310


>gi|46578866|ref|YP_009674.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603529|ref|YP_967929.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris DP4]
 gi|46448278|gb|AAS94933.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563758|gb|ABM29502.1| FMN adenylyltransferase [Desulfovibrio vulgaris DP4]
 gi|311232729|gb|ADP85583.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris RCH1]
          Length = 314

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 157/302 (51%), Gaps = 16/302 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V IGNFDG+H GH  ++ +  + A     P  V++F PHP  ++         +PP
Sbjct: 16  RGTCVTIGNFDGVHQGHRKLIGRTRQKAALRGMPSVVVTFCPHPLRVLVGPH-----TPP 70

Query: 76  SIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            I +      +LE +G    +  +FT E A    E F++ VLVE L V+ ++ G  F  G
Sbjct: 71  LITDYDKKLDLLEGLGVDLALMLRFTRELAALEPEDFVRTVLVEGLNVRELVVGYDFSLG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G+  +L + G +YGF    +D +  N + +VSS+ IR  +  G V     LL   +
Sbjct: 131 KGRKGNAEVLAQLGARYGFEVEQLDPVIVNDA-VVSSTRIRDLIRAGEVWEVRPLLDRFY 189

Query: 191 TIESDVIH-GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +   V+H   + GR LGFPTAN++   ++L   GVYA  +   D   + GV + G NPT
Sbjct: 190 VVRGKVVHGMGRGGRLLGFPTANIEPRDELLPMPGVYAT-WVNVDGALHRGVTSIGHNPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +  L +E+ I DF ++IYG   +V+F   LR   +F   E+L  ++  D   AR+IL
Sbjct: 249 F-GDERLSVETHILDFDRDIYGWDISVAFVQRLREPKRFSGPEELVAHIRHDVSLARQIL 307

Query: 310 ES 311
           ++
Sbjct: 308 DA 309


>gi|325686004|gb|EGD28065.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 313

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 157/294 (53%), Gaps = 13/294 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPAFAKGRFDIKVVPKQIFAGKK---IGSTEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L  P +L K GVYA   +  D+  Y  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELDWPKVLPKIGVYATMTQVGDRW-YQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAAL 292


>gi|119962882|ref|YP_947335.1| riboflavin biosynthesis protein RibF [Arthrobacter aurescens TC1]
 gi|119949741|gb|ABM08652.1| riboflavin biosynthesis protein RibF [Arthrobacter aurescens TC1]
          Length = 327

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 27/319 (8%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ-SSSPI 69
           +P      VV IGNFDG+H GH  +L Q    A  +N P   ++F+PHP  + +  S+P 
Sbjct: 11  VPKDFGPTVVTIGNFDGVHRGHQHVLSQLTDTAKRHNIPSVAVTFDPHPAQVHRPDSAPE 70

Query: 70  FTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             +    +Q+K+  L   G  A++  K+TLE A  +  +F+++VL+E L    ++ G   
Sbjct: 71  LIMG---LQDKLEALGDTGVDAVLVMKYTLELAAMTPLEFVREVLLEGLHAAHLVVGHDL 127

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDEL---------RNNKSQIVSSSNIRTALTKGH 178
           RFG   AGD   +Q+ G++ GF    ++E            +  +  SS+ +R AL++G 
Sbjct: 128 RFGAGNAGDVVTMQELGDQLGFGVQVVNEYGAGGFPVHHDGDTDRRCSSTWVREALSEGD 187

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTS 237
           V+ AA +LG    +  +V+HG   GR LGFPTAN+   S   +  +G+YA     Q  T 
Sbjct: 188 VVTAAAVLGRPHRMRGEVVHGAARGRDLGFPTANLSHDSTGYVPADGIYAGWLIDQAGTR 247

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKD 290
           +    + G NPT   +G    +E+ + D  +E      +YGQ   V F   LR  + ++ 
Sbjct: 248 WPAAISVGSNPTF--DGVSRQVEAHVIDRPEENVEDFNLYGQTVAVEFTQRLRGMVAYRG 305

Query: 291 IEKLKIYMGEDEKKARKIL 309
            E L   M  D  +A ++L
Sbjct: 306 PEALVEQMCLDVAQAHELL 324


>gi|298387807|ref|ZP_06997357.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 1_1_14]
 gi|298259412|gb|EFI02286.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 1_1_14]
          Length = 320

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 166/303 (54%), Gaps = 13/303 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H+GH  +++Q  +IA    +   +++F  HPR ++ ++     L+ P  +
Sbjct: 16  VATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNAAYHPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    +   FT + +  +A++F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  TNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERYQVKYLVIGYDHRFGHNRSEGFD 135

Query: 139 ILQKRGEKYGFHTV----FIDELRNNKSQI--VSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G+  G   +    + D+++ + +Q   VSSS IR  L +G V  AA  LGY + +
Sbjct: 136 DYVRYGQAIGIEVIRAQAYTDDIQIDTTQSAPVSSSLIRKLLHQGDVDAAARCLGYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+K+  I++L   + +D ++   IL
Sbjct: 254 IGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDSIDELIAQLHKDAEETEAIL 313

Query: 310 ESS 312
            ++
Sbjct: 314 LAA 316


>gi|257466194|ref|ZP_05630505.1| FMN adenylyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917352|ref|ZP_07913592.1| riboflavin kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691227|gb|EFS28062.1| riboflavin kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 321

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 162/308 (52%), Gaps = 16/308 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH +I+++A++ A   +    V +F  H
Sbjct: 1   MKVIKNI---LDIEENLQKSYVAIGNFDGLHTGHRMIIKRAMERAKEKDGVSIVFTFQNH 57

Query: 59  PRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT + A+ +  +F+ ++L   L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQDFADLTPLEFV-RLLKNKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALT 175
           V+ +  G  F FGK        L   GE  G   +++ E +   +   ++SS+ IR ++ 
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGEGEG---IYVHEFKAITSGEDVISSTLIRKSMM 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT--Q 233
            G    A  LLG+   +  +VIHG+KI R LGFPTAN+Q+   +    G+Y  + +   +
Sbjct: 174 TGEFERALKLLGHPMIVIGEVIHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQIEGE 233

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           DQ  Y GV N G NPT+ P G   LE  I +F ++IYG++  +   +YLR E KF  +E+
Sbjct: 234 DQIRY-GVINVGVNPTLKP-GEFSLEVHILNFDEDIYGKKMYIELMEYLRTEEKFDSVEE 291

Query: 294 LKIYMGED 301
           L   +  D
Sbjct: 292 LVACIAND 299


>gi|270307964|ref|YP_003330022.1| FAD synthase [Dehalococcoides sp. VS]
 gi|270153856|gb|ACZ61694.1| FAD synthase [Dehalococcoides sp. VS]
          Length = 305

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 152/294 (51%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDG+HLGH  ++ +  K A   N    +++F  HP  ++        LS   ++
Sbjct: 18  LVTIGIFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDDIKLILS---LE 74

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   L +MG   +I   FT E +  SA  F+   L++ L +K ++ G+ F  GK+RAGD
Sbjct: 75  ERNLALSQMGLDQIIMLSFTPEISTVSATDFV-GYLLDHLHMKGIVVGSDFALGKNRAGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++      F    +      ++QIVSS+ IR AL  G+V  A  +LG  + +   V
Sbjct: 134 ATALRRLSHIMDFSVSVV-SPVVIENQIVSSTAIRRALLSGNVSKARLMLGRNYHLRGTV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            +G   G  LGFPTAN+ L   + L  +GVYA +    ++  Y+ VAN G  PT      
Sbjct: 193 QNGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLGEK-EYNAVANIGSCPTF-GQEE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  + DF+ +I GQ   V F ++LRPEI F D E LK  +  D  KAR IL
Sbjct: 251 HRLEVHLLDFAGDIRGQVLKVEFVEFLRPEICFADAEALKTQISADISKARDIL 304


>gi|223936323|ref|ZP_03628235.1| riboflavin biosynthesis protein RibF [bacterium Ellin514]
 gi|223894841|gb|EEF61290.1| riboflavin biosynthesis protein RibF [bacterium Ellin514]
          Length = 307

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 155/290 (53%), Gaps = 5/290 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +AIG FDG+HLGH  I+ Q I   I + +   V++F+ HP T++        + P   +
Sbjct: 18  CLAIGFFDGVHLGHQQIIRQTIADSIKHEAVSLVVTFDQHPSTVVAPDRIPPLIYPLPHK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K +  +G  AL    F    +  S E FI+ +  +   ++++  G+ F FG  R+G+  
Sbjct: 78  LKTIGSLGSEALFLIHFDKAFSELSGEAFIRNLANDLGHIESLCVGSNFTFGYKRSGNVA 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  GE+  F TV      +   + VSS+ IR A+  G +  A+ +LG  +++   VI 
Sbjct: 138 LLKTLGEELKF-TVHGMAAVSLDGKTVSSTRIREAIRTGELDAASQMLGRTYSLCGPVIK 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-LL 257
           G+++G  LGFPTAN++L   +L   GVYA+    + + SY  V N G  PT+    P   
Sbjct: 197 GDQLGHKLGFPTANLKLDGLVLPPTGVYAVHAFVEGE-SYRAVVNIGLRPTLRNPAPERR 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E  I +F+ ++YG+   ++F + LR E KF  ++ LK+ + +D + A K
Sbjct: 256 IEVHILNFTGDLYGKAMEIAFVEKLRDEQKFPSLDALKLQIAKDIEDAAK 305


>gi|73667466|ref|YP_303482.1| FMN adenylyltransferase / riboflavin kinase [Ehrlichia canis str.
           Jake]
 gi|72394607|gb|AAZ68884.1| FMN adenylyltransferase [Ehrlichia canis str. Jake]
          Length = 305

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 148/293 (50%), Gaps = 9/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A GNFDG+HLGH  I+   + I I  +    +++F PHP   +        L+    +
Sbjct: 17  VLAFGNFDGVHLGHKSIINTVKNISIKEDVASAIITFAPHPAEYLHGRKNFLLLN---FE 73

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +KI  L+      L    F    +  S + FI+ VLV    VK ++TG    FG    G+
Sbjct: 74  QKIELLQSYEIDYLYIIDFNQSFSQLSPDDFIKDVLVSSCNVKYIVTGHNCFFGYKCLGN 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L    + Y +  V I+ +  N   + SSS IR  L++G +  A  +LG  + I   V
Sbjct: 134 VDLLYAYADIYNYEVVQINPVFINDDILCSSSLIRECLSEGKLDLANKILGRPYQISGKV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGP 255
           I G   GR +GFPT N+ +   +L K GVY+   +  + T++ +G+ N G  PT      
Sbjct: 194 IRGLARGRIIGFPTINVAIE-HMLPKVGVYSACVKINNTTTWLNGIVNIGLRPTFGDLNV 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +LE  IFDFS +IY Q  T+   D++RPE KF  +++LK  +  D  + +KI
Sbjct: 253 PILEMHIFDFSDDIYDQYVTIQLLDFIRPERKFDTVDQLKRQINNDIVQVKKI 305


>gi|271963661|ref|YP_003337857.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptosporangium roseum DSM 43021]
 gi|270506836|gb|ACZ85114.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptosporangium roseum DSM 43021]
          Length = 317

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 19/321 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +H ++    +P      V+ IG FDG+H GH  ++ +A+ +A+   +   V++F+PH
Sbjct: 1   MRGWHGLD---DVPEDWGRSVITIGVFDGVHRGHQQMVARAVAMADELGLLSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+    + ++L  +G  A+    FTLE +  S ++F+Q VLV+ L  
Sbjct: 58  PEEVVRPGTHPPRLTTARHRTELLAALGVDAVCVLPFTLEFSRMSPDEFVQTVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   +GD   LQ  GEKY F    +  + N ++  +SS+ IR  L  G 
Sbjct: 118 GGVVVGENFRFGHKASGDVETLQTLGEKYDFVAEAVPLVSNGET--ISSTLIRERLAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQT 236
           +   A  LG    +E  V+ G + GR LGFPTAN++ SPD   +  +GVYA   +     
Sbjct: 176 MEAVAAALGRPHRVEGVVVRGYQRGRQLGFPTANVE-SPDFTAIPADGVYAGWLQGIPTG 234

Query: 237 SYSGVANFGRNPTMVPNG--------PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIK 287
           +   V    R P  +  G        P  +E++  D    ++YG    V F   LR  +K
Sbjct: 235 NLPAVYGGERWPAAISVGTNPTFEGVPRTVEAYALDRDDLDLYGAHMAVDFGPRLRGNVK 294

Query: 288 FKDIEKLKIYMGEDEKKARKI 308
           F  IE L   +  D  +AR++
Sbjct: 295 FDSIEALVDQIRADVDEARRL 315


>gi|29347953|ref|NP_811456.1| riboflavin biosynthesis protein RibF [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339855|gb|AAO77650.1| riboflavin biosynthesis protein ribF, putative riboflavin kinase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 320

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 166/303 (54%), Gaps = 13/303 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H+GH  +++Q  +IA    +   +++F  HPR ++ ++     L+ P  +
Sbjct: 16  VATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNAAYHPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    +   FT + +  +A++F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  TNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERFQVKYLVIGYDHRFGHNRSEGFD 135

Query: 139 ILQKRGEKYGFHTV----FIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G+  G   +    + D+++ +  +S  VSSS IR  L +G V  AA  LGY + +
Sbjct: 136 DYVRYGQAIGIEVIRAQAYTDDIQIDTIQSAPVSSSLIRKLLHQGDVDAAARCLGYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+K+  I++L   + +D ++   IL
Sbjct: 254 IGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDSIDELIAQLHKDAEETEAIL 313

Query: 310 ESS 312
            ++
Sbjct: 314 LAA 316


>gi|313124015|ref|YP_004034274.1| riboflavin kinase / fmn adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280578|gb|ADQ61297.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 313

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 157/294 (53%), Gaps = 13/294 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  IA   + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAAEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPAFAKGRFDIKVVPKQIFAGKK---IGSTEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L  P +L K GVYA   +  D+  Y  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELDWPKVLPKIGVYATMTQVGDRW-YQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF DI  L
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADIAAL 292


>gi|229031439|ref|ZP_04187439.1| FMN adenylyltransferase [Bacillus cereus AH1271]
 gi|228729728|gb|EEL80708.1| FMN adenylyltransferase [Bacillus cereus AH1271]
          Length = 335

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 159/294 (54%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHGEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+++IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|28493548|ref|NP_787709.1| FMN adenylyltransferase [Tropheryma whipplei str. Twist]
 gi|28476590|gb|AAO44678.1| riboflavin kinase [Tropheryma whipplei str. Twist]
          Length = 312

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 155/299 (51%), Gaps = 12/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            + IG FDG+HLGH  +LE+ + + N ++   V++F+  P+T  +       L     + 
Sbjct: 17  ALTIGKFDGVHLGHRRLLERIVALQNQDTSALVVTFDRDPKTFFKKDMSFAPLCSLEQKL 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE       +  +F  E A+ SAE F+ KVL+E L + +++ G  FRFG    GD  +
Sbjct: 77  SLLENCNIPNCLILRFDDELASMSAEDFVHKVLLEKLNMSSIVIGDGFRFGARGLGDAML 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K   + GF+   I +++  K+ I SS+ IR  L+ G V NA+  LG        V+HG
Sbjct: 137 LEKLARELGFYLEVIPKIQFGKTNI-SSTLIRKFLSLGQVGNASSCLGRNHVCTGTVVHG 195

Query: 200 EKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTM--VPNG 254
           +K GR LGFPTAN  L  D+   +  +GVY  R  +    SY    + GRNPT   +   
Sbjct: 196 KKRGRELGFPTAN--LGKDVSGFIPADGVYIGRIIS--DRSYPAAVSIGRNPTFGDLEFS 251

Query: 255 PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +   +   D S  ++YG+R  V F  +LR  + +K I+ LK  +  D ++ ++   ++
Sbjct: 252 QIEAHALYEDISSLDLYGRRIDVEFIAHLRDTMLYKSIDSLKAAIRSDVERCKEYFSTT 310


>gi|261416684|ref|YP_003250367.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373140|gb|ACX75885.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327498|gb|ADL26699.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 297

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +GNFDG HLGH  +    +A+   N+   TV+SF PH   +++       L+    +
Sbjct: 4   AVTMGNFDGCHLGHQALFRTLKAVAEVNHLQPTVISFEPHSNYVLRGPGDPLLLTTTEEK 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + +E +G   L+   FT E A    ++F++  L+E  EV ++  G    FG   AG +G
Sbjct: 64  REFVESLGIEFLV-LPFTSELAKLPFDKFVRTELIEKREVVSMFFGHDHCFG---AGGKG 119

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             +     +   +  +  +  +K + VSSS +R AL  G V  A   LG  + +   V+ 
Sbjct: 120 NYETITAAFPELSTQMLSMVLHKGERVSSSAVRNALLNGDVDRAQTYLGRPYRLSGTVVV 179

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++G T+GFPTAN+Q+     L K GVY    R  D   Y  V N G  PT      L 
Sbjct: 180 GKRLGHTIGFPTANVQMEQYKFLPKGGVYVASARLSDGRIYRSVVNIGTQPTTPGTHNLA 239

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E+++ DF+++IYGQ   +    +LRPE KF  IE L   +G D   A+
Sbjct: 240 VEAYLLDFNEDIYGQHLALDLLAFLRPEKKFASIEDLVRQIGMDADTAK 288


>gi|158320564|ref|YP_001513071.1| riboflavin biosynthesis protein RibF [Alkaliphilus oremlandii
           OhILAs]
 gi|158140763|gb|ABW19075.1| riboflavin biosynthesis protein RibF [Alkaliphilus oremlandii
           OhILAs]
          Length = 307

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 21/311 (6%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
           E+++S+   L+G  VA+GNFDG+H+GH  ++   I+     N    V +F  HP +II  
Sbjct: 9   ELDKSI---LRG--VALGNFDGVHIGHQKLISTLIRECKEKNLESCVYTFGNHPLSIITE 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    ++   +++++LE +    L    F  E  + + E F++ +LV+ L  K V+ G 
Sbjct: 64  KNEHPQITNMDMKKRLLESLEVELLYLENFNKEFMSLTPEGFVKDILVDRLNCKIVVVGF 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            + FG    G+  +L++ G KYGF       V ID ++      V S+ IR  +  G+  
Sbjct: 124 DYTFGYKAKGNVQVLKELGLKYGFTVYEISPVTIDNIK------VGSTIIREYIKDGNFE 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYS 239
            A   LG  + I S VI+G+ IG  LG+PTAN+++ P  L+  EGVYA   R   +  Y 
Sbjct: 178 KANTFLGRPYAIYSMVINGKGIGNKLGYPTANIRIEPSHLVPIEGVYATYIRVNGK-FYK 236

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G  + G NPT   N    +E+FI DF+++IY +   V F   LR +IKFK+ + L   + 
Sbjct: 237 GATSVGTNPTFGVN-QTTVETFILDFNEDIYNECIEVQFIKKLRDQIKFKNTDDLVAQIK 295

Query: 300 EDEKKARKILE 310
           ED   A+K L+
Sbjct: 296 EDANNAKKYLQ 306


>gi|71901179|ref|ZP_00683283.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|71729061|gb|EAO31188.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
          Length = 261

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 138/255 (54%), Gaps = 3/255 (1%)

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F P PR    S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+ 
Sbjct: 1   FEPLPREYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLG 60

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  +I S++ IR  L
Sbjct: 61  RLGVREVLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERI-SATKIRALL 119

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G   +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       
Sbjct: 120 AAGDFAHAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALS-GIYATWVHGIF 178

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  +  V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +
Sbjct: 179 EQPWPSVSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTM 237

Query: 295 KIYMGEDEKKARKIL 309
              +  D ++AR IL
Sbjct: 238 TTQIHRDAQQARHIL 252


>gi|57234593|ref|YP_181344.1| riboflavin biosynthesis protein RibF [Dehalococcoides ethenogenes
           195]
 gi|57225041|gb|AAW40098.1| riboflavin biosynthesis protein RibF [Dehalococcoides ethenogenes
           195]
          Length = 305

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+HLGH  ++ +  K A   N    +++F  HP  ++        LS   ++
Sbjct: 18  LITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDDIKLILS---LE 74

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   L +MG   +I   FT E +  SA  F+   L++ L +K ++ G+ F  G++RAGD
Sbjct: 75  ERNLALSQMGLDQIIMLSFTPEISTVSATDFV-GYLLDHLHMKGIVVGSDFALGRNRAGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++      F    +      ++QIVSS+ IR AL  G+V  A  +LG  + I   V
Sbjct: 134 ATALRRLSHIMDFSVSVV-SPVVIENQIVSSTAIRRALLSGNVSKARLMLGRNYHIRGTV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            +G   G  LGFPTAN+ L   + L  +GVYA +    ++  Y+ VAN G  PT      
Sbjct: 193 QNGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLGEK-EYNAVANIGSCPTF-GQEE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  + DF+ +I GQ   V F ++LRPEI F D E LK  +  D  KAR IL
Sbjct: 251 HRLEVHLLDFAGDIRGQVLKVEFVEFLRPEICFADAEALKTQISADISKARDIL 304


>gi|196042163|ref|ZP_03109446.1| riboflavin biosynthesis protein RibF [Bacillus cereus NVH0597-99]
 gi|196027015|gb|EDX65639.1| riboflavin biosynthesis protein RibF [Bacillus cereus NVH0597-99]
          Length = 323

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKIEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|253572545|ref|ZP_04849947.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837960|gb|EES66049.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 320

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 166/303 (54%), Gaps = 13/303 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H+GH  +++Q  +IA    +   +++F  HPR ++ ++     L+ P  +
Sbjct: 16  VATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNAAYHPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    +   FT + +  +A++F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  TNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERYQVKYLVIGYDHRFGHNRSEGFD 135

Query: 139 ILQKRGEKYGFHTV----FIDELRNNKSQI--VSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G+  G   +    + D+++ + +Q   VSSS IR  L +G V  AA  LGY + +
Sbjct: 136 DYVRYGQAIGIEVIRAQAYTDDIQIDTTQSAPVSSSLIRKLLHQGDVDVAARCLGYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+K+  I++L   + +D ++   IL
Sbjct: 254 IGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDSIDELIAQLHKDAEETEAIL 313

Query: 310 ESS 312
            ++
Sbjct: 314 LAA 316


>gi|302874667|ref|YP_003843300.1| riboflavin biosynthesis protein RibF [Clostridium cellulovorans
           743B]
 gi|307690719|ref|ZP_07633165.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           cellulovorans 743B]
 gi|302577524|gb|ADL51536.1| riboflavin biosynthesis protein RibF [Clostridium cellulovorans
           743B]
          Length = 308

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 158/289 (54%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +G+FDG+H+GH  +++  +  A  NN    V +F+ HP +I+        L     + 
Sbjct: 18  ITLGSFDGLHMGHQQLIKSTVSKARENNIKSMVYTFSNHPLSILAPDKEPKQLMVNEKKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +IL+K+    +    F  E        FI+ +LV+   +K ++ G   RFG    GD  +
Sbjct: 78  EILKKLEVDIVNFAHFNEEYLKIQPVAFIE-LLVKKYNMKGIVVGYNNRFGYKNQGDVEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    +YG+  + ID ++ + + IVSS+ IR  +T+G V  A+ LLG  +++E  V+ G
Sbjct: 137 LKAYSNEYGYEVIVIDPVKEHDT-IVSSTKIRAFITEGEVEKASVLLGRPYSLEGKVVSG 195

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + +G T+GFPTAN++++   LL K GVY    + +++  Y G+ N G NPT V    L +
Sbjct: 196 KHLGNTIGFPTANIEINFKRLLPKGGVYYSNVKVENKI-YKGITNIGYNPT-VQGDSLSV 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ I DF+Q IY +   V F   +R E KFK I++L   + +D+  A K
Sbjct: 254 ETHILDFNQSIYDEFIEVYFVKRIRDEKKFKSIDELVKQLKQDKAYAEK 302


>gi|258652424|ref|YP_003201580.1| riboflavin biosynthesis protein RibF [Nakamurella multipartita DSM
           44233]
 gi|258555649|gb|ACV78591.1| riboflavin biosynthesis protein RibF [Nakamurella multipartita DSM
           44233]
          Length = 313

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 152/301 (50%), Gaps = 6/301 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           +P +    VV IG FDG+H GH  ++ +A+++   +  P  +++F+PHP  +++  S   
Sbjct: 10  IPPNWGRCVVTIGVFDGVHRGHQALIGEAVRVGREHGLPTVLMTFDPHPAEVVRPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     + +++ + G  AL+   FT   +  SAE+F+  VLV+ L    V+ G  FRFG
Sbjct: 70  MLVTLRRRAELIAEQGVDALLVLPFTPALSQVSAEEFVHDVLVDRLHAAHVVVGENFRFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              AG   +L++ G ++GF    I  +       VSS+ +R  +  G ++ A   LG   
Sbjct: 130 HRGAGSVDLLRELGPRFGFAVHGITLVPGPDEVTVSSTYVRACVGAGDMVAATAALGRPH 189

Query: 191 TIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNP 248
            +E  V+HGE + G  LG+PTAN+ ++    +  +G+YA  F    + S   V + G NP
Sbjct: 190 RVEGFVVHGEGRGGAQLGYPTANLDVAEHAAIPADGIYAGWFVLGTRRSPLAV-SIGTNP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T        +E F+ D     YG+R    F + LR  +KF  ++ L   +  D  + R++
Sbjct: 249 TFSGR-ERTVEGFVIDEGGNFYGRRVAFDFVERLRDTVKFDSVDALIAQIDTDVARTRQV 307

Query: 309 L 309
           L
Sbjct: 308 L 308


>gi|189465323|ref|ZP_03014108.1| hypothetical protein BACINT_01671 [Bacteroides intestinalis DSM
           17393]
 gi|189437597|gb|EDV06582.1| hypothetical protein BACINT_01671 [Bacteroides intestinalis DSM
           17393]
          Length = 305

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 8/308 (2%)

Query: 7   IEINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTII 63
           +++ +++P  L    VA IG FDG+H GH  ++EQ     +A      V++F  HPR ++
Sbjct: 1   MQLLRNIPEVLPQPCVATIGFFDGVHRGHRYLIEQVREAAVACGFASGVVTFPVHPRKVV 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           Q       L+    +  +L + G    +   FT E A  SA +F+   L     ++ ++ 
Sbjct: 61  QPEYRPELLTTYEEKVSLLAETGLDYCMMLDFTPEIAILSAREFML-FLRNHYNIRALVI 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG +R+       + G++ G   V +     NK   VSSS IR  L +G+V  AA
Sbjct: 120 GYDHRFGHNRSEGFDDYVRYGQELGI-KVILARAYINKETTVSSSVIRQLLLEGNVSEAA 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGV 241
             LGY + +   V+ G ++GR +GFPTAN+++  PD L+  +GVYA+R     QT Y G+
Sbjct: 179 DCLGYDYFLNGSVVSGYRVGRKIGFPTANLRVDDPDKLVPSDGVYAVRVIVAGQT-YGGM 237

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + G  PTM       +E  IF+F  +IY Q   + F  YLR E+KF  I++L   + +D
Sbjct: 238 LSIGYRPTMANGTDRSIEVNIFNFHSDIYEQHIRLFFVRYLRSELKFDSIDELIAQLHKD 297

Query: 302 EKKARKIL 309
            + A + L
Sbjct: 298 AENASRYL 305


>gi|156741115|ref|YP_001431244.1| riboflavin biosynthesis protein RibF [Roseiflexus castenholzii DSM
           13941]
 gi|156232443|gb|ABU57226.1| riboflavin biosynthesis protein RibF [Roseiflexus castenholzii DSM
           13941]
          Length = 311

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+H GH  ++   ++ A        VL+F+PHP  +++  +   TL+    +
Sbjct: 17  VLTIGAFDGVHRGHAHLIGATVQRARAFGRQAAVLTFDPHPDVVVRPGNERPTLTTLVER 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++  +G   +I   FT E    +A +F+ + L   + ++ +  G  F  G+ R GD  
Sbjct: 77  AELIAALGVDLMIVIPFTTEIMALTAHEFMAR-LCGAVALRELCIGWDFALGRGREGDAS 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L   G+ +G+    ++    +  + VSS+ IR AL+ G +  A  LLGY + +   ++ 
Sbjct: 136 RLAAIGQTFGYAVHRVEPFLLD-GETVSSTRIRAALSVGDIEAANRLLGYPYGLRGPIVE 194

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GRT+GFPTAN+ + P  +L   GVY  R    +  +Y  VAN G  PT        
Sbjct: 195 GDRRGRTIGFPTANINVDPRRMLPAHGVYVCR-AVLNGVTYGAVANVGVRPTF-DGSRRT 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E+++ DFS ++YG+   + F   LR E KF  +  L   +  D   AR  LE
Sbjct: 253 VEAYLLDFSGDVYGEELRLMFLHRLRGEHKFDGVAALVAQITRDVAAARAWLE 305


>gi|300871235|ref|YP_003786108.1| riboflavin biosynthesis protein [Brachyspira pilosicoli 95/1000]
 gi|300688936|gb|ADK31607.1| riboflavin biosynthesis protein [Brachyspira pilosicoli 95/1000]
          Length = 309

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 29/299 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           KG VV IG FDG+H GH  +++  + +A         +N     +I     +   S  ++
Sbjct: 16  KGSVVTIGKFDGVHKGHQKLIKYTVNMAK-------KYNLLSVVMIIRKKNV---SIYNM 65

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           +E I  ++ +G + +I   F  E     A++F  + L+E+ ++K ++ G  F FGKDR G
Sbjct: 66  EENISFIKALGVNYIIVIDFLPEFYTMEAKEFFNR-LIEYYKMKRIVIGEDFAFGKDRVG 124

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++   + G +   ++ L N+    VSSS IR  L+ G V N + +LG  +++   
Sbjct: 125 DIDFLKRYALEKGVNVNIVNFL-NHCGDKVSSSKIRDCLSNGEVDNVSKMLGRNYSMSGI 183

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT------SYSGVANFGRNP 248
           +IHG  +GR +G+PTAN++L+  I + K GVY+   +  +        ++ G++N     
Sbjct: 184 IIHGNALGRKIGYPTANLELNDSIFVPKMGVYSSLVKIGNSAKLYKALTFIGISNI---- 239

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               N  L +ES I DFS+ IYG++ TV F  Y+R  IK   IE++K  + +DE   RK
Sbjct: 240 ----NKELRVESHILDFSKMIYGKKITVIFLKYIRDNIKVNSIEEVKSLLEKDEYNVRK 294


>gi|296139447|ref|YP_003646690.1| riboflavin biosynthesis protein RibF [Tsukamurella paurometabola
           DSM 20162]
 gi|296027581|gb|ADG78351.1| riboflavin biosynthesis protein RibF [Tsukamurella paurometabola
           DSM 20162]
          Length = 320

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 149/312 (47%), Gaps = 19/312 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      VV IG FDG+H GH  ++ +A   A+    P  +++F+PHP  +++  S   
Sbjct: 10  VPADWGRCVVTIGVFDGVHRGHAQLIARATAEAHERGLPAVLMTFDPHPAEVVRPGSHPP 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++ E++G        FT       AE F+  VLVE L    V+ G  F FG
Sbjct: 70  QLTTLTRRAELAEELGIDVFCVMPFTATVMAQPAEDFVHSVLVERLHAAAVVVGDNFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
               G+  +L + G+K+GF    +  L    +   SS+ IR+ +  G V  AA  LG   
Sbjct: 130 NRALGNVEMLGRLGQKFGFSVDSV-PLLTEHAVTYSSTYIRSCVDAGDVKAAAEALGRPH 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL---KEGVYAIRF----------RTQDQTS 237
            +E  V+ G+  GR LGFPTAN  ++P +      +GVYA  F          +      
Sbjct: 189 RVEGVVVRGDGRGRELGFPTAN--VAPPMFAAIPADGVYAAWFTVLGAGPVVGQVTPGER 246

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT        +E+F+ D S ++YGQ   V F + +R   +F+ I+ L   
Sbjct: 247 YPAAVSVGSNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVERVRGMERFESIDDLLTA 305

Query: 298 MGEDEKKARKIL 309
           MG D ++ R IL
Sbjct: 306 MGGDVERTRAIL 317


>gi|258645569|ref|ZP_05733038.1| riboflavin biosynthesis protein RibF [Dialister invisus DSM 15470]
 gi|260402927|gb|EEW96474.1| riboflavin biosynthesis protein RibF [Dialister invisus DSM 15470]
          Length = 307

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 161/297 (54%), Gaps = 14/297 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           V+A G FDG+H GH  +L+  +++A      P+ V +F PHP T++  S+ I  L   S 
Sbjct: 17  VLAFGFFDGVHRGHQAVLQACLQLAREKKAMPVAV-TFYPHPLTVLLPSASIQLLLSESE 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E++ ++MGF   +    T E    SA +F+Q  L     +  ++TG  F FGK+  G+ 
Sbjct: 76  KEELFKQMGFETTVVISPTEEFLGQSAGRFLQS-LSRITSLCGIVTGENFTFGKNAEGNA 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            +L       G   VFI  ++  K++  ++SS+ IR  + +G V  A + LG  + I  D
Sbjct: 135 ELLNSYFLDKG---VFIQIVKLEKAEGGVISSTRIRKCILQGDVKKAGYFLGRPYRICGD 191

Query: 196 VIHGEKIG-RTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           +IHG + G   LGFPTAN++   +  +  +GVYA R   + +  Y  V N G NPT   N
Sbjct: 192 IIHGFRRGTEVLGFPTANLKPERERAVPGDGVYATRAFIRGR-QYPSVTNVGTNPTF-GN 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +E+FIF F ++IY     + + + +R E +F DIE L   + ED K+A++ILE
Sbjct: 250 KERSIETFIFSFDEKIYDAPFALEWIEKIREEKQFPDIEALCRQIEEDIKRAKQILE 306


>gi|65321136|ref|ZP_00394095.1| COG0196: FAD synthase [Bacillus anthracis str. A2012]
 gi|118479029|ref|YP_896180.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis str. Al Hakam]
 gi|228916446|ref|ZP_04080012.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928857|ref|ZP_04091889.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935123|ref|ZP_04097950.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228947528|ref|ZP_04109818.1| FMN adenylyltransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123322|ref|ZP_04252526.1| FMN adenylyltransferase [Bacillus cereus 95/8201]
 gi|229186046|ref|ZP_04313216.1| FMN adenylyltransferase [Bacillus cereus BGSC 6E1]
 gi|118418254|gb|ABK86673.1| FMN adenylyltransferase / riboflavin kinase [Bacillus thuringiensis
           str. Al Hakam]
 gi|228597465|gb|EEK55115.1| FMN adenylyltransferase [Bacillus cereus BGSC 6E1]
 gi|228660098|gb|EEL15734.1| FMN adenylyltransferase [Bacillus cereus 95/8201]
 gi|228812048|gb|EEM58379.1| FMN adenylyltransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824488|gb|EEM70293.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830664|gb|EEM76269.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843025|gb|EEM88107.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 335

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|212639517|ref|YP_002316037.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Anoxybacillus flavithermus WK1]
 gi|212560997|gb|ACJ34052.1| FAD synthase [Anoxybacillus flavithermus WK1]
          Length = 326

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 12/302 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++ A +IA++      V++F+PHP  ++ +S   +  ++P   
Sbjct: 22  VMALGYFDGVHLGHQKVIQTAKQIADDRQYKSAVMTFHPHPSVVLGRSKQHVRFITPLKE 81

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK + K+G   L    FT E A    +QF+ + ++  L VK V+ G  F +G+   G  
Sbjct: 82  KEKQIAKLGVDNLYVVPFTPEFAQLLPQQFVDEYIIG-LGVKHVVAGFDFTYGRLGKGTM 140

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L     +    TV   +    +   +SS+ IR  L +G V    HLLG  + +   V+
Sbjct: 141 ETLPFHSREQFTQTVIPKQTFGEEK--ISSTYIRQRLAEGDVEQLPHLLGRLYEVTGTVV 198

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP- 255
           HG+K GRT+GFPTAN+ L  D I+ + GVYA+   T    +++GV N G  PT     P 
Sbjct: 199 HGDKRGRTIGFPTANVALDDDYIIPRIGVYAVTV-TIGAKTWTGVCNVGYKPTFHAQQPE 257

Query: 256 -LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
              +E  +FDFS +IYG    + +   LR E  F  + +L   +  D + AR+  ++  P
Sbjct: 258 EPTIEVHLFDFSADIYGANVRIQWHKRLRDERAFSSVHELIEQIQRDVQAAREYFQN--P 315

Query: 315 LS 316
           L+
Sbjct: 316 LA 317


>gi|291541805|emb|CBL14915.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus bromii
           L2-63]
          Length = 310

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 7/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            VA+G FDG+H GH  ++  A++   N  + V  +F   P+ ++  SS    L     + 
Sbjct: 15  AVALGFFDGLHKGHRRVILSAVEQKKNGLLPVCFTFAQSPKEVLGKSSK-GALMTTEDKL 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K LE +G        F  +  N SA+ F++K++   L  K V+ G  + FGK+  GD  +
Sbjct: 74  KTLESLGIEHTFSPDFK-KLMNMSAKDFVEKIIFGNLNAKFVVCGFNYHFGKNGEGDTDL 132

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K  ++ G     I+  R++   +VSS+ IR+ +++G++  A  LL   F   + + HG
Sbjct: 133 LKKLCDENGTELKVIEPERDD-GDVVSSTLIRSLVSEGNIRRANKLLCSYFGFSAVITHG 191

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GR LG PT N +L  ++ + K GVYA     ++   Y GV N G  PT V    LL 
Sbjct: 192 KRLGRELGTPTINQKLPENLAVPKYGVYASAVTLENGKVYCGVTNIGVKPT-VGGTKLLS 250

Query: 259 ESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           E+++ DF   EIYGQ   V   D++RPE KF +I +LK  + ++   A++I +  Y
Sbjct: 251 ETWMPDFHGGEIYGQTADVRLLDFIRPEKKFDNITELKNAITDNAVTAKEIFDEMY 306


>gi|153954060|ref|YP_001394825.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           kluyveri DSM 555]
 gi|219854673|ref|YP_002471795.1| hypothetical protein CKR_1330 [Clostridium kluyveri NBRC 12016]
 gi|146346941|gb|EDK33477.1| RibF [Clostridium kluyveri DSM 555]
 gi|219568397|dbj|BAH06381.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 312

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSP 74
           +K   +A+G+FDG+HLGH  ++ + IK+A N  +   V +F  HP + I        L  
Sbjct: 13  MKSTYIALGSFDGLHLGHMSLVNKTIKLAKNNGAKSMVFTFKNHPLSTINPDLAPKILMD 72

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L   G   +    F  E      E F+  +L  +   K +I G  +RFG    
Sbjct: 73  TECKVNVLRNAGLDIINMANFNREFMKIHPEDFVIHLLNNY-RAKGIIVGFNYRFGYKNL 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT-KGHVLNAAHLLGYRFTIE 193
           GD  +L+K  + Y F    ID ++  K Q+VSSS IRT ++ +G +     LL   F I+
Sbjct: 132 GDVSLLKKMSKNYKFSLSIIDSVKY-KGQVVSSSIIRTLISDEGDMKKVNKLLTRPFAIQ 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             VIHG+ +GR LGFPT N+      ++ +G         D   + G+ N G NPT   N
Sbjct: 191 GKVIHGKHLGRKLGFPTINLNYDKKFVIPKGGVYYTIVQLDNGIFKGITNVGYNPTTCDN 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E+ I +F+++ YG+   V F + +R E+KF  + +L   + +D+  A K
Sbjct: 251 -KLSIETHILNFNEDAYGKNAKVHFIERIRDELKFNSLSELANQLKKDKLYASK 303


>gi|30263813|ref|NP_846190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Ames]
 gi|47529236|ref|YP_020585.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49186659|ref|YP_029911.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Sterne]
 gi|49478388|ref|YP_037870.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|52141680|ref|YP_085150.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus E33L]
 gi|165872636|ref|ZP_02217267.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0488]
 gi|167635826|ref|ZP_02394135.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0442]
 gi|167639764|ref|ZP_02398033.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0193]
 gi|170687835|ref|ZP_02879049.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0465]
 gi|170706835|ref|ZP_02897293.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0389]
 gi|177652134|ref|ZP_02934680.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0174]
 gi|190568428|ref|ZP_03021335.1| riboflavin biosynthesis protein RibF [Bacillus anthracis
           Tsiankovskii-I]
 gi|196044435|ref|ZP_03111670.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB108]
 gi|218904936|ref|YP_002452770.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH820]
 gi|227813283|ref|YP_002813292.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. CDC
           684]
 gi|229604157|ref|YP_002868047.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0248]
 gi|254683484|ref|ZP_05147344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722005|ref|ZP_05183794.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. A1055]
 gi|254735847|ref|ZP_05193553.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Western North America USA6153]
 gi|254739627|ref|ZP_05197321.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Kruger B]
 gi|254756000|ref|ZP_05208031.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Vollum]
 gi|254759339|ref|ZP_05211364.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Australia 94]
 gi|30258457|gb|AAP27676.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. Ames]
 gi|47504384|gb|AAT33060.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180586|gb|AAT55962.1| riboflavin biosynthesis protein RibC [Bacillus anthracis str.
           Sterne]
 gi|49329944|gb|AAT60590.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975149|gb|AAU16699.1| riboflavin biosynthesis protein C [Bacillus cereus E33L]
 gi|164711668|gb|EDR17214.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0488]
 gi|167512165|gb|EDR87542.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0193]
 gi|167528783|gb|EDR91541.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0442]
 gi|170128253|gb|EDS97122.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0389]
 gi|170668151|gb|EDT18900.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0465]
 gi|172082503|gb|EDT67568.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0174]
 gi|190560432|gb|EDV14410.1| riboflavin biosynthesis protein RibF [Bacillus anthracis
           Tsiankovskii-I]
 gi|196024470|gb|EDX63142.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB108]
 gi|218539990|gb|ACK92388.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH820]
 gi|227002763|gb|ACP12506.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. CDC
           684]
 gi|229268565|gb|ACQ50202.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0248]
          Length = 323

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|238898019|ref|YP_002923699.1| bifunctional flavokinase; FAD synthetase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465777|gb|ACQ67551.1| bifunctional: flavokinase; FAD synthetase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 314

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
            HNI       NH  G V++IGNFDG+H GH  +L +          P  V+ F P P  
Sbjct: 7   LHNIRPE----NH--GCVLSIGNFDGVHRGHQALLARLKHEGQKRHLPTMVMIFEPQP-- 58

Query: 62  IIQSSSPIFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            ++  SP    +PP +     + K L ++    ++  KF    A Y+A+ FI + L++ L
Sbjct: 59  -LEFFSP--EKAPPRLTYLRDKLKYLSQIKIDYVLCVKFDPSFAAYTADDFIAEFLIKQL 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V  ++ G  FRFGK R G+  +L +  +K  F  + I+     + +I SS+ IR AL K
Sbjct: 116 GVHLLVVGDDFRFGKKRQGNIKLLTQASKKIDFQIISIEGFFYKRLRI-SSTVIREALQK 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
             +  A  LLG+ + I   ++HG+K+GRTLGFPT N+ +    +  +GVY +        
Sbjct: 175 DQLALAEDLLGHPYCISGRIVHGDKLGRTLGFPTLNLPVKSSRMPVQGVYVVEVYGLTYE 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN G  PT +      ++  + DFS E+YG+   + F   LR E +F  ++ L+ 
Sbjct: 235 VLPGVANIGSRPT-ISGTCHQIDVHVLDFSMEVYGRYVDIVFRQKLRNEQRFTSLDALRQ 293

Query: 297 YMGEDEKKAR 306
            +  D   AR
Sbjct: 294 QISLDVLAAR 303


>gi|20807836|ref|NP_623007.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter tengcongensis MB4]
 gi|254479110|ref|ZP_05092462.1| riboflavin biosynthesis protein RibF [Carboxydibrachium pacificum
           DSM 12653]
 gi|20516398|gb|AAM24611.1| FAD synthase [Thermoanaerobacter tengcongensis MB4]
 gi|214034959|gb|EEB75681.1| riboflavin biosynthesis protein RibF [Carboxydibrachium pacificum
           DSM 12653]
          Length = 316

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 155/286 (54%), Gaps = 12/286 (4%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLS 73
           +L+  V+A+GNFDG+H+GH  ++E A+ IA +  +   V +F  H   I++       ++
Sbjct: 12  NLEEKVIALGNFDGVHIGHQKLIEDAVSIARDKKLKSAVFTFKQHTSKILEPDKAPELIT 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             S + ++L+       I + FT E +  S E+FI+ +LV+ L++K  + G  +RFG   
Sbjct: 72  TLSQKIEVLKSFSLDYGIFFDFTKELSLLSPERFIKDILVDSLKMKVAVVGPNYRFGHKG 131

Query: 134 AGDRGILQKRGEKYGF---HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            GD  +L+K    Y F   + V +          VSSS IR  + +G++  A  LL   F
Sbjct: 132 LGDVEMLKK----YSFICSYEVHVVPKVTYGGITVSSSLIRELIKEGNIEKANVLLNRYF 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +IE  ++ G+ +GR LGFPTAN+++  +++L K GVY  R + +   ++  V N G  PT
Sbjct: 188 SIEGKIVKGKGMGRILGFPTANVEVPEEVVLPKRGVYVTRAKIKGN-NFISVTNVGFKPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                 L +E+ I DF   IYG+   + F   +R EIKF+ ++ LK
Sbjct: 247 F-GETRLSVETHILDFEGYIYGEGIEIEFIKRIRDEIKFESLQALK 291


>gi|330901415|gb|EGH32834.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 288

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 136/273 (49%), Gaps = 14/273 (5%)

Query: 39  EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE 98
           E+A+++    P  V+ F P PR      +    L+    + ++L   G   ++   F   
Sbjct: 20  ERAVEL--GVPSCVVIFEPQPREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQR 77

Query: 99  TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVF 153
               SA  F++ VL++ L V+ +  G  FRFG DR GD   LQ+ G  YGF      TV 
Sbjct: 78  LCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVE 137

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           ID +R      VSS+ +R AL       A  +LG  F I   V+HG+K+ R LG PTAN+
Sbjct: 138 IDGIR------VSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANV 191

Query: 214 QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR 273
           QL    +   GVY +     D  ++ GVAN G  PT+  +G   LE  + DF+ ++Y +R
Sbjct: 192 QLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRR 250

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            TV+F   LR E +F  +E LK  +  D   AR
Sbjct: 251 LTVAFHHKLRDEQRFASLEALKTAINADVAAAR 283


>gi|22299099|ref|NP_682346.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermosynechococcus elongatus BP-1]
 gi|22295281|dbj|BAC09108.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
           BP-1]
          Length = 315

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 6/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +A+GNFDG+H GH  ++   +K A  +   +V++F+PHP+        +  L+P + +  
Sbjct: 21  IALGNFDGVHRGHQEVIRTLLKAAPPDCYPSVMTFSPHPQAFFTGEERLL-LTPEAEKRA 79

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L + G + +I   FT   A  S  +F++++LV+ L+ K +  G  F FG+ R+G    L
Sbjct: 80  LLHQCGIAQVIVLPFTQALAQLSPLEFVEQILVQQLQAKVLSVGFNFGFGRGRSGTAEDL 139

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +     +G   V I       S  VSSS +R AL  G V  A  LLG  +T+   V  GE
Sbjct: 140 RSLCAPFGI-VVHIVPPYCRGSDRVSSSAVRAALAAGEVALARELLGRAYTLTGTVTQGE 198

Query: 201 KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGPLLL 258
           ++GR LGFPTAN+ L  + LL + GVYA R         + GV N G  PT V    +  
Sbjct: 199 QLGRQLGFPTANLVLPREKLLPRYGVYACRVSGPALPREHLGVVNIGVRPT-VGGQEVRT 257

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  +  +   +Y Q  T+    ++RPE+    +  L+  +  D + A  +LE
Sbjct: 258 EVHLLHWQGNLYNQEITLHLEAFIRPELTLPSLAALRAQIAADCQVAVDLLE 309


>gi|229092849|ref|ZP_04223983.1| FMN adenylyltransferase [Bacillus cereus Rock3-42]
 gi|228690471|gb|EEL44254.1| FMN adenylyltransferase [Bacillus cereus Rock3-42]
          Length = 335

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 33  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 92

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 93  KEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 151

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 152 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 207

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 208 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 266

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 267 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 320


>gi|188586074|ref|YP_001917619.1| riboflavin biosynthesis protein RibF [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350761|gb|ACB85031.1| riboflavin biosynthesis protein RibF [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 316

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 154/307 (50%), Gaps = 11/307 (3%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQS 65
           + N +  N  K   +++GNFDG+H+ H  IL   +K A     T  +L   PHP     +
Sbjct: 6   DFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPEIKFHN 65

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            S  F L+  +++EKI  +  +G    +  +F  E A  S  ++  K L + L V+ V  
Sbjct: 66  KSN-FLLT--TLEEKINKISSLGIQVGVLKEFDREFAELSPREY-SKWLCDKLRVQGVSV 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG+   G    LQ  G++ GF    I+ ++ + + IVSS   R  + +GH+  A 
Sbjct: 122 GFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGAIIVSSQLCRKYIREGHINKAN 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVA 242
            +L   +TI   V  G   G  LGFPTAN+++    I+ + GVY +R    +Q  Y GV 
Sbjct: 182 QMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEV-NQNKYWGVC 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      L+ E+F+ D  Q++Y +  TVSF D++R E KF D   L   +  D 
Sbjct: 241 NVGNKPTF-SGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDI 299

Query: 303 KKARKIL 309
           K AR I+
Sbjct: 300 KMARDII 306


>gi|298242768|ref|ZP_06966575.1| riboflavin biosynthesis protein RibF [Ktedonobacter racemifer DSM
           44963]
 gi|297555822|gb|EFH89686.1| riboflavin biosynthesis protein RibF [Ktedonobacter racemifer DSM
           44963]
          Length = 321

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 156/305 (51%), Gaps = 20/305 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDGIH GH  +L++   +A   +S   +++F PH   +++    +  L+    +
Sbjct: 14  VVTIGNFDGIHRGHRHLLQRLHSLAEQLHSKPVLVTFTPHVLMVLRPDIYVQYLTTLEEK 73

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            +I  + G+    I   FT E A  SAE F+ + L +  +++ ++ G+ F  G +R G+ 
Sbjct: 74  LQIAHQTGYIQDTIVINFTPEVAALSAEDFMDQ-LCQRFQIRGMVVGSNFSLGHNRTGNV 132

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             LQ  G+++G     +  L     + +SS+ IRT +++G V  A  LLG+   +   V+
Sbjct: 133 AFLQAYGQRHGIEVQSV-ALEEAGQERISSTRIRTLVSEGQVEEANRLLGHPVQVGGIVV 191

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-----------YSGVANFG 245
           HG++ GR LGFPTAN++  P  LL   GVYA R     Q             Y+GV N G
Sbjct: 192 HGDQRGRVLGFPTANVRPDPHKLLPANGVYAARVFISKQEGPESDGQAISPVYNGVVNIG 251

Query: 246 RNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             PT   NG   L+E+ + D   ++Y     + F   LR E +F  IE LK  +  D ++
Sbjct: 252 IRPTF--NGKERLVEAHLLDAKLDLYDAYIVIEFIARLRGEQRFPGIEALKAQIEADSQQ 309

Query: 305 ARKIL 309
           AR IL
Sbjct: 310 ARHIL 314


>gi|167585707|ref|ZP_02378095.1| riboflavin biosynthesis protein RibF [Burkholderia ubonensis Bu]
          Length = 330

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVAGSDGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           ++  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++      T 
Sbjct: 176 NLAAAAQALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALMGIFVVQVHGLADTP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+V +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVVDSGRVLLEVHLLDWHGDAYGKLVRVEFLQKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           + +D   AR
Sbjct: 296 IAQDVANAR 304


>gi|238019435|ref|ZP_04599861.1| hypothetical protein VEIDISOL_01304 [Veillonella dispar ATCC 17748]
 gi|237864134|gb|EEP65424.1| hypothetical protein VEIDISOL_01304 [Veillonella dispar ATCC 17748]
          Length = 310

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDGIH GH  ++ +A+   +A N    +++F  HP TI+        +    I 
Sbjct: 18  VYALGTFDGIHRGHQRVIHKAVDEAMAVNGVSIIITFEHHPLTILHPDRVPKRVIQEEIM 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +LE +    ++R   T E    SA+ F+  +  + + V  ++ G  F FG    G+  
Sbjct: 78  DSVLEDLNVDYILRLPMTEELLKMSADDFLGALCTD-MNVAAIVIGENFTFGAKGLGNPD 136

Query: 139 ILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            +++         V +  L   +  S  +SS+ IR A+ +G + +A H LG  F  +  V
Sbjct: 137 YMKQVLADKNIQ-VLVQPLLPCDGLSTPISSTEIRKAIREGRLEDATHWLGRPFQFKGTV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G++ GRTLGFPT N+ L  ++    +GVYA R    D   Y GV N G NPT   N  
Sbjct: 196 IKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRV-CIDGIWYDGVGNIGDNPTF-KNQY 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              E  +F+F Q+IYG+   V F  YLR E+KF +++ L   M  DE++A  +L  +
Sbjct: 254 HRCEVHVFNFDQDIYGKEVIVQFISYLRGEVKFNNLQDLIDQMKVDEEQALAVLAKA 310


>gi|329118438|ref|ZP_08247144.1| riboflavin biosynthesis protein RibF [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465484|gb|EGF11763.1| riboflavin biosynthesis protein RibF [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 307

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 149/299 (49%), Gaps = 25/299 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTI---IQSSSPIFTLSPP 75
            V IGNFDG+HLGH  IL++  A   A       + F P P      +    P   L+P 
Sbjct: 16  AVTIGNFDGVHLGHLHILQRLRAEADARGLAAAAVVFEPQPAEFFARVSGREPPPRLTPL 75

Query: 76  SIQEKILEKMGFSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + ++L + G    +R  +F    +  SAE FI  VL   L  + ++ G  FRFG+ RA
Sbjct: 76  RDKLRLLRESGCVDAVRVLRFNRAFSQMSAEGFIDTVLRRDLHTRYLLVGDDFRFGQGRA 135

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNN---KSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           GD G+L  + +       F+ E   +     +  SS+ +R  L  G +  A  + G+ +T
Sbjct: 136 GDFGLLAAQAD-------FVTEQTPSILIAGERASSTAVRGLLQAGRLDEARRVSGHDYT 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI----RFRTQDQTSYSGVANFGRN 247
           +   V+HG+K+GRTLG PTAN+ L P      GV+A+    RF T+      G A+FG N
Sbjct: 189 LSGRVVHGKKLGRTLGCPTANIHLPPHRYALSGVFAVEAEGRFGTR-----RGAASFGFN 243

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT+       LE  +  FS  +YG+R TV F   LR E KF  +++L+  + ED   AR
Sbjct: 244 PTVDGGAVQKLEVHLIGFSGNLYGERLTVRFLHKLRDEEKFSGLDELRARIHEDIAAAR 302


>gi|257463770|ref|ZP_05628158.1| FMN adenylyltransferase [Fusobacterium sp. D12]
 gi|317061314|ref|ZP_07925799.1| riboflavin kinase [Fusobacterium sp. D12]
 gi|313686990|gb|EFS23825.1| riboflavin kinase [Fusobacterium sp. D12]
          Length = 321

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH  I+ +A + A   N    V +F  H
Sbjct: 1   MKVIKNI---LEIKENLQKSYVAIGNFDGLHTGHRTIIRKARERAEEKNGVSVVFTFQNH 57

Query: 59  PRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT   A+ +  +F+ K+L + L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQNFADLTPLEFV-KLLKQKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALT 175
           V+ +  G  F FGK        L   G   G   + + EL+   +  +++SS+ IR ++ 
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGRGQG---ICVHELKAITSGEEVISSTLIRKSMM 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQ 233
            G    A  LLG+   +  +V+HG+KI R LGFPTAN+Q+   +    G+Y   ++   +
Sbjct: 174 TGQFAKALKLLGHPMIVIGEVVHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQLEGE 233

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D+  Y GV N G NPT+ P G   LE  I DF ++IYG++  +   +YLR E KF  +E+
Sbjct: 234 DRIRY-GVINVGVNPTLKP-GEFSLEVHILDFDEDIYGKKMYIELMEYLRKEEKFDSVEE 291

Query: 294 LKIYMGED 301
           L   +  D
Sbjct: 292 LIACIAND 299


>gi|166366409|ref|YP_001658682.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
 gi|166088782|dbj|BAG03490.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
          Length = 283

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 152/283 (53%), Gaps = 6/283 (2%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +HLGH  +L+   +     P TV+SF PHPR    +      L+P   + ++LE +G   
Sbjct: 1   MHLGHQTVLQPIFQDEPAYP-TVVSFTPHPREFF-TGEKWQLLTPLGEKVEVLENLGVKQ 58

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           L+   F+ E A+ +   F++++LVE L+ K++  G  F FG  R G    L +   ++  
Sbjct: 59  LVLLPFSAELASLTPLAFVEQILVEKLQAKSISVGQDFHFGYRRQGTAEDLLQIASQFNI 118

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
             V I  L+N  +  +SSS IR AL  G+V  A  +LG  +++   V+ G+++GRTLGF 
Sbjct: 119 K-VEIVGLKNCGAGRISSSLIRQALAAGNVEQAGQMLGRPYSLTGRVVVGQQLGRTLGFH 177

Query: 210 TANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE 268
           TAN+Q+ PD LL + GVY   +   D +    V N G  PT +    + +E  + D+S  
Sbjct: 178 TANLQVPPDKLLPQFGVYC-GWVPLDGSRLPAVMNIGYRPT-IEGKTVSVEIHLLDWSGH 235

Query: 269 IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +Y +  T+    +LRPE KF  +++LK  +  D  ++R IL S
Sbjct: 236 VYDRILTMDLVQFLRPEQKFNSLDRLKNQIEIDCDRSRLILTS 278


>gi|225865788|ref|YP_002751166.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB102]
 gi|225786991|gb|ACO27208.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB102]
          Length = 323

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A +IA+       V++F PHP  ++ +  +    ++P   
Sbjct: 21  VMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHPSVVLGKKEAHAEYITPMCD 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EKI+E +G   L   KF    A    +QF+   ++  L VK V+ G  + +G+   G  
Sbjct: 81  KEKIVESLGIDILYVVKFDGSFAGLLPQQFVDDYII-GLNVKHVVAGFDYSYGRLGKGKM 139

Query: 138 GIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L    RGE   F    I+++   + + VSS+ +R  +  G +     +LG  +T+   
Sbjct: 140 ETLPFHARGE---FTQTVIEKVEFQEEK-VSSTALRKLIRNGEMEQIPSILGRAYTVGGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +   +  Y GV N G  PT   + 
Sbjct: 196 VVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHGEW-YDGVCNIGYKPTFKEDE 254

Query: 255 -PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E  +F+F+ +IY Q  TV +   +R E KF  I++L   + +D+K A++
Sbjct: 255 RQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVEQIAKDKKTAQE 308


>gi|325962818|ref|YP_004240724.1| FMN adenylyltransferase; riboflavin kinase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323468905|gb|ADX72590.1| FMN adenylyltransferase; riboflavin kinase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 327

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 157/317 (49%), Gaps = 23/317 (7%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ-SSSPI 69
           +P      VV IGNFDG+H GH  +L + ++ A    S   V++F+PHP  + +  S+P 
Sbjct: 11  VPADFGPSVVTIGNFDGVHRGHQQVLSELVRTARITRSKAVVVTFDPHPALVHRPESAPE 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +  P   E + E +G  A++  K++L+ A+ + E+F+++ LV+ L    V+ G   RF
Sbjct: 71  LIMGLPDKLEALGE-LGLDAILVMKYSLDLASLTPEEFVEQYLVDCLHAGHVVIGHDVRF 129

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDEL---------RNNKSQIVSSSNIRTALTKGHVL 180
           G+  +GD   +++ G K+GF    I E           +   +  SS+ +R  L +G V 
Sbjct: 130 GRGNSGDLETMRELGRKFGFEVQVISEFGSEGYPLHDDDGTDRRCSSTWVREVLQEGDVA 189

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS 239
            AA +LG    +  +V+HG   GR LGFPTAN+  +   L+  +G+YA     Q    + 
Sbjct: 190 TAAAVLGRPHRMRGEVVHGAARGRALGFPTANLASNASGLIPADGIYAGWLVDQAGKRWP 249

Query: 240 GVANFGRNPTMVPNG-PLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIKFKDIE 292
              + G NPT   +G    +E+ + D  +E      +YGQ   V F   LR  + ++  E
Sbjct: 250 AAISVGSNPTF--DGVSRQVEAHVIDRPKEAVEDFDLYGQTVVVEFVARLRGMVAYRGPE 307

Query: 293 KLKIYMGEDEKKARKIL 309
            L   M  D  +A  +L
Sbjct: 308 ALVEQMRLDVIQAHDLL 324


>gi|110803323|ref|YP_698969.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens SM101]
 gi|110683824|gb|ABG87194.1| riboflavin biosynthesis protein RibF [Clostridium perfringens
           SM101]
          Length = 309

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 165/294 (56%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I  +     L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKAGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFNKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|220912205|ref|YP_002487514.1| riboflavin biosynthesis protein RibF [Arthrobacter chlorophenolicus
           A6]
 gi|219859083|gb|ACL39425.1| riboflavin biosynthesis protein RibF [Arthrobacter chlorophenolicus
           A6]
          Length = 327

 Score =  145 bits (366), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 167/331 (50%), Gaps = 30/331 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           ++++H+      +P      VV  GNFDG+H GH  +L Q I+ A   +S    ++F+PH
Sbjct: 2   VYIWHD---PSEVPADFGPSVVTFGNFDGVHRGHQQVLSQLIRSARLTHSKAVAVTFDPH 58

Query: 59  PRTIIQ-SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P  I +  S+P   +    +++K+  L ++G  A++  K++L+ A+ +AE+F+++ LV+ 
Sbjct: 59  PAVIHRPESAPRLIMG---LEDKLEALGELGLDAILVVKYSLDLASLTAEEFVEQYLVDC 115

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---------RNNKSQIVS 166
           L    V+ G   RFG+  +GD   ++  G K+GF    I E           +   +  S
Sbjct: 116 LHASHVVIGHDARFGRGNSGDLETMKALGGKFGFEVQVISEFGSEGYPLHDDDGTDRRCS 175

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGV 225
           S+ +R AL +G V  AA +LG    +  +V+HG   GR LGFPTAN+   S  ++  +G+
Sbjct: 176 STWVREALQEGDVATAAEVLGRAHRMRGEVVHGAARGRALGFPTANLASDSTGLIPADGI 235

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQE------IYGQRCTVSF 278
           YA     +    +    + G NPT   +G    +E+ + D  +E      +YGQ   V F
Sbjct: 236 YAGWLVDEAGKRWPAAISVGSNPTF--DGVSRQVEAHVIDRPREAVEDFDLYGQTVIVEF 293

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              LR  + ++  E L   M  D  +A ++L
Sbjct: 294 VARLRGMVAYRGPEALVDQMKLDVVQAHQLL 324


>gi|146329723|ref|YP_001209013.1| riboflavin kinase RibF [Dichelobacter nodosus VCS1703A]
 gi|146233193|gb|ABQ14171.1| riboflavin kinase RibF [Dichelobacter nodosus VCS1703A]
          Length = 319

 Score =  145 bits (366), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 24/309 (7%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+H GH  ++   Q +       +T +SF PHPR + +  +P F LS    +
Sbjct: 20  VLMIGNFDGVHRGHQKMISCLQEMAAPQKLVLTAMSFYPHPRQLTRQQAPQF-LSTIHDR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LEK G    I   FT      +AE F+Q  L   L+++ ++ G  FRFG   AG+  
Sbjct: 79  AYFLEKYGIEDWILVPFTPSFMQLAAEDFVQTYLFNQLDLRALLVGDDFRFGYRGAGNVD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K   K       +  + + +++I SSS IR AL +  +  A HLLG+  T    V  
Sbjct: 139 LLRKM-SKNALKIAALATVADEQARI-SSSRIRQALLQHRLDEATHLLGHALTFTGLVRA 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR--TQDQTSYSGVANFGRNPT------- 249
           G   GR +G PTAN+ +SP   L +GVY ++ R     Q  +  VAN G  PT       
Sbjct: 197 GAARGRKIGVPTANIHVSPYWCLPDGVYVVKLRRCKAPQQWHWAVANLGTAPTFSGQQRK 256

Query: 250 ----MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
               ++P+   + ++F       +YG R  ++   +LR E KF++++ L   + +D   A
Sbjct: 257 WEVHLLPDSHGVSQAF------HLYGCRVQIAVMQFLRTEKKFENMQALSDQIHQDIAAA 310

Query: 306 RKILESSYP 314
           + ++ +  P
Sbjct: 311 QSVIAAQTP 319


>gi|317471564|ref|ZP_07930911.1| riboflavin biosynthesis protein RibF [Anaerostipes sp. 3_2_56FAA]
 gi|316900967|gb|EFV22934.1| riboflavin biosynthesis protein RibF [Anaerostipes sp. 3_2_56FAA]
          Length = 310

 Score =  145 bits (366), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 6/301 (1%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSS 67
           I+Q+         VA+G FDG+H GH LI +Q ++       TV+ SF+  P   ++S +
Sbjct: 4   IHQTENFQFHNSAVALGKFDGLHRGHQLIFDQLLEYKKQGYQTVVFSFDRPPVNTLKSEN 63

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
                S    +E++L K G   LI + FT E +  S   F+ +VL++ + +K ++ G   
Sbjct: 64  YHMIYSKEE-KERLLAKKGMDVLIEHPFTKEFSKLSPRDFVTEVLIKKVGMKILVVGDDC 122

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG  R G+  +L++  ++Y F  + I +L  N   IVSSS IR+ L +  +  A  LL 
Sbjct: 123 GFGYKRQGNVELLKEMQKEYDFKLIVIPKLELNGG-IVSSSRIRSLLREARIEEANSLLS 181

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG 245
             F +   V+ G  +G+  LG PTAN   +P+ LL   GVY  R   ++Q  Y G++N G
Sbjct: 182 SPFLVYGPVVQGNHMGKDILGVPTANQIPNPEKLLPPNGVYVSRITIKNQV-YYGISNIG 240

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E++I +F + IY +  +V    + RPE+KF+ ++ L   M ED   A
Sbjct: 241 VKPTIEGKKHMGVETYILNFDKNIYHKPISVELLCFKRPEMKFESLDCLSRQMKEDALFA 300

Query: 306 R 306
           R
Sbjct: 301 R 301


>gi|237713940|ref|ZP_04544421.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409152|ref|ZP_06085696.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_22]
 gi|294647477|ref|ZP_06725060.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CC 2a]
 gi|294806516|ref|ZP_06765356.1| riboflavin biosynthesis protein RibF [Bacteroides xylanisolvens SD
           CC 1b]
 gi|229446096|gb|EEO51887.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262352899|gb|EEZ01995.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_22]
 gi|292637187|gb|EFF55622.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CC 2a]
 gi|294446274|gb|EFG14901.1| riboflavin biosynthesis protein RibF [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 326

 Score =  145 bits (366), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 13/306 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++ ++     L+ P
Sbjct: 13  KPSVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNTNYRPELLTTP 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L  +G    +   FT E +  +A +F+ ++L E  +VK ++ G   RFG +R+ 
Sbjct: 73  EEKIRLLANIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQVKYLVIGYDHRFGHNRSE 132

Query: 136 DRGILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
                 + G++ G   +         E+ N  +  VSSS IR  L +G V  AA  L Y 
Sbjct: 133 GFEDYVRYGKEIGIEVIRAKAYTSNIEIENVPNVPVSSSLIRKLLHQGEVDLAADCLKYE 192

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           + ++  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D+ +Y G+ N G  
Sbjct: 193 YFLDGIVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDKKTYMGMLNIGVR 251

Query: 248 PTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT + NGP   +E  I  F  +IY +   ++F    RPE+KF  I++L + + +D ++  
Sbjct: 252 PT-IDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSSIDELIVQLHKDAEETE 310

Query: 307 KILESS 312
            IL +S
Sbjct: 311 AILLAS 316


>gi|218295164|ref|ZP_03496000.1| riboflavin biosynthesis protein RibF [Thermus aquaticus Y51MC23]
 gi|218244367|gb|EED10892.1| riboflavin biosynthesis protein RibF [Thermus aquaticus Y51MC23]
          Length = 294

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 145/291 (49%), Gaps = 19/291 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L QA+  A     P+ V +F+P  +   +    +  L     +
Sbjct: 15  VVAVGSFDGVHLGHQHLLRQALAEAKARRLPLLVYTFDPPTKVFTRGEGFLMDL-----E 69

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L  +G   ++   F    A  SAE F++ +    LE + +  G  FRFG+ RAG 
Sbjct: 70  EKVEALRSLGVELILAVPFNETFARRSAEAFLEDL--RALEAEAIYVGEDFRFGQGRAGT 127

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+K         V +  L     + V SS IR  L  G V  A HLLG  ++    V
Sbjct: 128 PEGLKK------VAPVRLIPLLELGGEPVKSSRIRDLLKAGQVEEARHLLGRPYSAYGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + G+++GR LGFPTAN+ + P  +L  GVYA+         Y GVAN G  PT+      
Sbjct: 182 VEGDRMGRKLGFPTANLAVHPLKVLPPGVYAVEAEGA-FGRYKGVANVGFRPTL-GGEER 239

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  +  F  E+YG+   V F   LR E +F  +E LK  + +D  +AR+
Sbjct: 240 RLEVHLLGFLGELYGEEVRVRFLKRLREERRFPSLEDLKAQIAQDVAEARR 290


>gi|258591355|emb|CBE67654.1| Riboflavin biosynthesis protein RibF [NC10 bacterium 'Dutch
           sediment']
          Length = 335

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 157/298 (52%), Gaps = 9/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            VA+G FDG+HLGH  IL + ++ A+    T  V +F+ HP  ++  S     L+P  I+
Sbjct: 18  AVAVGTFDGVHLGHREILGRVVRRAHQEEGTAVVFTFSRHPLEVVNPSKAPPLLTPLPIK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + I+  +G   +I   FT   A  +   F+   +V+ L+ + V  G  F FG+ RAG   
Sbjct: 78  QDIMAALGVDLMIAVGFTPSLAATAPRDFVNTYMVDRLQARFVCIGYDFAFGQARAGSPE 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  GE++ F    +  +  +  Q+VSS+ IR  L +G +  A   LG  + +   V  
Sbjct: 138 LLRALGEEHQFELDVVPAMTAD-GQVVSSTRIRGLLARGELREATRCLGRPYAVMGQVER 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-L 257
           G + GR LG+PTAN+  + D+++ +GVYA     + Q     + N GR PT    G +  
Sbjct: 197 GAERGRWLGYPTANLAATGDLIVPDGVYAGMVWLK-QRLQKALINVGRAPTF--GGEVRR 253

Query: 258 LESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           +E  + +  + E+YG+  T+ F + LR E +F D   L+  +  D+++A +I  +++P
Sbjct: 254 VEVHVLEADEGELYGEMLTLLFLERLRDERRFDDPSLLRRQIDYDKRQADEIF-TAFP 310


>gi|226356759|ref|YP_002786499.1| riboflavin biosynthesis protein ribF [Deinococcus deserti VCD115]
 gi|226318749|gb|ACO46745.1| putative Riboflavin biosynthesis protein ribF [Deinococcus deserti
           VCD115]
          Length = 299

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 15/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVAIG+FDG+HLGH  ++ Q    A  +  P  V +F+P  R + Q    + TL P  + 
Sbjct: 16  VVAIGSFDGVHLGHQALIAQLKARARRHRVPSVVYTFDPPTRVLTQGVEFLSTL-PEKLD 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L++ G    +   FT E A    + F++ + +  L  +T++ G  F FG+ RAG   
Sbjct: 75  --LLDRYGVDETVAVSFTTEFAARPKDAFLEDLRL--LRPRTIVVGEDFHFGRGRAGSVE 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    +     V +  +     + + S+ +R  L  G V  A  LLG R+  +  V+ 
Sbjct: 131 DLRLVAPE-----VLVVPIHGLSGEDIKSTRVREYLRAGDVAGARRLLGRRYEAQGVVVE 185

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-PLL 257
           G+++GRTLG+PTAN+Q+     L  GV+A+    +   ++ G+AN G  PT+  NG    
Sbjct: 186 GDQLGRTLGWPTANIQVPEGKALPLGVFAVTVAGEGLDAWPGMANVGFRPTV--NGHERR 243

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            E  +FD+  ++YGQ   V F+ +LR E KF  ++ LK  +  D + AR  L
Sbjct: 244 FEVHLFDYQDDLYGQELQVKFYTHLRGEQKFSGLDALKAQLVLDAQAARTAL 295


>gi|326204070|ref|ZP_08193931.1| riboflavin biosynthesis protein RibF [Clostridium papyrosolvens DSM
           2782]
 gi|325985837|gb|EGD46672.1| riboflavin biosynthesis protein RibF [Clostridium papyrosolvens DSM
           2782]
          Length = 311

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 163/314 (51%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V H+ + N     +     V +GNFDG+H+GH  ++   I+ +  N     V +F  H
Sbjct: 1   MQVIHSNDTNNIFSCYTG---VGLGNFDGLHIGHMALINTLIRESKLNGLSSVVYTFTKH 57

Query: 59  PRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
              I++    +P+       I+  +L +     L   +F    +  S E+F+  +L   L
Sbjct: 58  TENILRKKLITPLLLTETKKIE--LLSETTLDNLYLDEFNEGFSRMSPEEFVVNILKNKL 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +K  + G  +RFG    GD  +L++ G+KYGF  V I  +  +  +I+SS++IR A+  
Sbjct: 116 NIKLAVAGHDYRFGYKGGGDIPLLEEYGKKYGFKVVAIPPITCD-GEIISSTSIRQAIIN 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G++  A  LLG  ++I ++V++G ++G T+GFPTAN+     ++L   GVY  +     +
Sbjct: 175 GNIETAYKLLGRNYSIIAEVVNGRRVGNTIGFPTANIHPEKYLVLPHNGVYITKTLLNGR 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y+ + N G NPT        +E+ I DF ++IYG++  V F   +R E KF ++E+L 
Sbjct: 235 L-YNSMTNVGYNPTFEDVRQKTVETHIMDFDKDIYGEKIEVFFLKKIRDEKKFNNVEELV 293

Query: 296 IYMGEDEKKARKIL 309
             + +D K +R  L
Sbjct: 294 NQISKDMKISRDYL 307


>gi|55980496|ref|YP_143793.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB8]
 gi|55771909|dbj|BAD70350.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB8]
          Length = 294

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 145/290 (50%), Gaps = 19/290 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L QA+  A    +P+ V +F+P  +   +    +  L     Q
Sbjct: 15  VVAVGSFDGVHLGHQYLLRQALSEAKTLKAPLLVYTFDPPTKVFTRGEGFLMDL-----Q 69

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L ++G   ++   F  E A    E F++ +    L+   +  G  FRFG+ RAG 
Sbjct: 70  EKVEALREVGVELILAVPFNEEFARRPPEAFLEDL--RALQASRIYVGEDFRFGQGRAGG 127

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++           +  L +   + V SS IR  L +G V  A HLLG  +     V
Sbjct: 128 PEALER------VAPTRVVPLLSLGGEAVKSSRIRALLREGRVEEARHLLGRLYGAYGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + G+++GR LGFPTAN+ + P  +L  GV+A+         Y GVAN G  PT+      
Sbjct: 182 VEGDRMGRRLGFPTANLAVHPLKVLPPGVFAVEAEGAF-GRYKGVANVGTRPTL-GGEER 239

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            LE  +  F+ E+YG+   V F   LR E +F  +E L+  + ED  +AR
Sbjct: 240 RLEVHLLGFAGELYGEEVRVRFLKRLREERRFPSLEALRAQIAEDVAEAR 289


>gi|329667125|gb|AEB93073.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           DPC 6026]
          Length = 312

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 165/300 (55%), Gaps = 9/300 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI 69
           S P   K  ++ +G FDG+H+GH  +++ A  IA   N P+ V++F+ HP+ I ++    
Sbjct: 11  SAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKNLPLMVMTFDKHPKEIYKNDHKF 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +E+ +EK+G   L+  KFT E +  S + F+ +V+++ L+  T++ G  + +
Sbjct: 71  VYLETEQEKERKMEKLGVDYLVIIKFTQEFSQLSPQDFVDQVVMK-LKADTIVVGFDYTY 129

Query: 130 G-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           G KD A    + +   +++    + ++  +      V S+ IR A+  G+V  AA LLG 
Sbjct: 130 GPKDIANVENLPKFAKDRF---KIVVEPKQAIDKIKVGSTYIRKAIQHGNVELAAELLGQ 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
            +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N
Sbjct: 187 PYETSGIIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKVNGKW-HDAMTSVGYN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 246 ETFKTNHGLTIETNIFDFDEEAYGKPLTLAWYKFIRKNKKFSGIEELSHQLDQDKRDIKQ 305


>gi|257452005|ref|ZP_05617304.1| FMN adenylyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317058554|ref|ZP_07923039.1| riboflavin kinase [Fusobacterium sp. 3_1_5R]
 gi|313684230|gb|EFS21065.1| riboflavin kinase [Fusobacterium sp. 3_1_5R]
          Length = 321

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH  I+++A++ A   +    V +F  H
Sbjct: 1   MKVIKNI---LDIEENLQKSYVAIGNFDGLHTGHRTIIKRAMERAKEKDGVSIVFTFQNH 57

Query: 59  PRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT + A+ +  +F+ ++L   L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQDFADLTPLEFV-RLLKNKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALT 175
           V+ +  G  F FGK        L   GE  G   +++ E +   +   ++SS+ IR ++ 
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGEGEG---IYVHEFKAITSGEDVISSTLIRKSMM 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT--Q 233
            G    A  LLG+   +  +VIHG+KI R LGFPTAN+Q+   +    G+Y  + +   +
Sbjct: 174 TGEFERALKLLGHPMIVIGEVIHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQIEGE 233

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           DQ  Y GV N G NPT+ P G   LE  I +F ++IYG++  +   +YLR E KF  +E+
Sbjct: 234 DQIRY-GVINVGVNPTLKP-GEFSLEVHILNFDEDIYGKKMYIELMEYLRTEEKFDSVEE 291

Query: 294 LKIYMGED 301
           L   +  D
Sbjct: 292 LVACIAND 299


>gi|167758072|ref|ZP_02430199.1| hypothetical protein CLOSCI_00410 [Clostridium scindens ATCC 35704]
 gi|167663969|gb|EDS08099.1| hypothetical protein CLOSCI_00410 [Clostridium scindens ATCC 35704]
          Length = 308

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 151/296 (51%), Gaps = 9/296 (3%)

Query: 11  QSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSS 66
           + L N+   G   V  G FDG+H GH  ++++  +    + I   V +F+  P    +  
Sbjct: 5   RGLSNYNDSGKSAVTFGKFDGLHKGHQKLVKKVREFGEKNKINSIVCAFDMRPLWEEKGL 64

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +P   ++    Q  +  ++ +  LI   FT E +   AE+FI+ ++        V+ GT 
Sbjct: 65  NPQLLMNGKEQQMHLEGQVDY--LIECPFTREFSQIPAEEFIKDIIKGLFHADYVVVGTD 122

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG D+ GD  +L    ++ G+  V +++ R  + +I+SS+ ++  L  G +  A+ LL
Sbjct: 123 FCFGHDKQGDIHMLAAYEKECGYDLVVVEKERY-EDRIISSTYVKEVLRSGDMKLASRLL 181

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           GY + +   V HG+K+GRTLGFPT N+      I    GVY     T D+  Y G+AN G
Sbjct: 182 GYPYGLTGIVEHGKKLGRTLGFPTFNVAWPKAKIAPPNGVYLCDV-TVDKDRYHGIANVG 240

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
             PT+     LL+ESF+F ++   YG+  T+      RPE KF  IE++K  +  D
Sbjct: 241 VKPTVTSENRLLIESFLFGYAGSAYGKEVTIELLSMCRPEQKFDSIEEMKACIDRD 296


>gi|52080274|ref|YP_079065.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52785651|ref|YP_091480.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52003485|gb|AAU23427.1| riboflavin kinase and FAD synthase [Bacillus licheniformis ATCC
           14580]
 gi|52348153|gb|AAU40787.1| RibC [Bacillus licheniformis ATCC 14580]
          Length = 319

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 163/317 (51%), Gaps = 15/317 (4%)

Query: 9   INQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRT 61
           I+ S P+ LK       V+A+G FDG+HLGH  ++  A   A    +  +V++F+PHP  
Sbjct: 4   IHISHPHDLKREDFPTSVMALGYFDGVHLGHQQVILTAKNTAAREGVKTSVMTFHPHPSA 63

Query: 62  IIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           +++    P   ++P   +  I+E +G   L    FT E A+ S E+FI + ++ +  V  
Sbjct: 64  VLKKGREPKDLITPLQDKISIIEDLGVDFLYVVTFTPEFASLSPEEFIDQYILGF-HVTH 122

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK   G     Q+  +     T       +N+ Q VSS+ IR+ L  G V 
Sbjct: 123 VVAGFDFTFGKFGKGTMENFQEYAKGRVKSTSVAK--YSNQDQKVSSTRIRSVLGAGDVE 180

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            AA LLG  + ++  VIHG+K GRT+GFPTAN+ L    I+   GVYA++        Y+
Sbjct: 181 YAAELLGRPYHVKGFVIHGDKRGRTIGFPTANIGLKDTYIVPPTGVYAVKAEIGGAV-YN 239

Query: 240 GVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           GV N G  PT     P    +E  +FDF ++IYG    V ++  LR E KF  +++L   
Sbjct: 240 GVCNVGYKPTFYEKRPGQPSIEVNLFDFDRDIYGSEIKVEWYKRLRSEKKFGSVDELVEQ 299

Query: 298 MGEDEKKARKILESSYP 314
           +  D+++A +      P
Sbjct: 300 ISRDKEEAIRFFRERKP 316


>gi|269926023|ref|YP_003322646.1| riboflavin biosynthesis protein RibF [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789683|gb|ACZ41824.1| riboflavin biosynthesis protein RibF [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 324

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 159/297 (53%), Gaps = 10/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDG+HLGH  I+++ + +A    +  T ++F+PHPR ++ S + +  L P   +
Sbjct: 22  VITMGTFDGLHLGHQAIIKKTLAVAEEHGLESTAITFHPHPRYVL-SGNKVPQLLPLEDR 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  MG + +    F LE A  SA++F + +L +W+    ++ G  FR G++R     
Sbjct: 81  LDLLADMGINHVWCINFDLELAKLSAKEFFE-LLSKWVVPAALVVGENFRTGRNREAGVK 139

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
            L   G++ G+  + +  L  +  Q VSS+ IR  LT+ G V +AA LLG  + I+  V+
Sbjct: 140 ELDVLGQELGWELISVPTLYIH-GQPVSSTRIRHLLTQEGDVESAASLLGRNYYIKGTVV 198

Query: 198 HGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVA--NFGRNPTMVPNG 254
           HGE  GR LG+PTAN+ +S D+++   G+Y       + ++   VA  + G  PT    G
Sbjct: 199 HGEGRGRQLGYPTANLSVSSDLVVPYNGIYYCDAYLDEPSTQPKVAAVSIGTRPTF-GGG 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E+++ D+  ++Y +   + F   +R E+KF  +E L   M  D    R +  S
Sbjct: 258 ERTIEAYLLDWYGDLYDRTLKLEFIHRIRDELKFASVEDLIDQMDRDVANIRSLASS 314


>gi|212550382|ref|YP_002308699.1| riboflavin kinase/FMN adenylyltransferase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212548620|dbj|BAG83288.1| riboflavin kinase/FMN adenylyltransferase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
          Length = 310

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 166/301 (55%), Gaps = 15/301 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +G FDG+HLGH  +++   + A  S +   +++F  HP  I+Q     F L+  + +E
Sbjct: 16  ATVGFFDGVHLGHRYLIKLLKEYAKKSKLKTAIITFPIHPCKILQKDYQPFLLN--TFEE 73

Query: 80  KI----LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           K+    L ++ +  +I   FT E +  +A+ FIQ++L + L +K ++ G   RFGK R  
Sbjct: 74  KVRRLSLTEIDYCYVIN--FTQEFSKITAQDFIQQILHKQLRIKELLVGYDNRFGKGRIY 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                 + G+  G     ID+L   +    SS++IR  L +G V  AA  L Y +++E  
Sbjct: 132 GYKQYVQYGKSCGMSVRQIDKLPEKEDIHNSSTSIRQLLMEGKVKKAADKLSYYYSLEGK 191

Query: 196 VIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIR-FRTQDQTSYSGVANFGRNPTMVP 252
           V+ G ++GRT+ +PTAN+ L     ++  +G+YA   F   D+  + G+   G+ PT+  
Sbjct: 192 VVQGNQLGRTIDYPTANISLYDKEKVIPCKGIYATYVFIKGDK--HIGMTYIGKRPTITF 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +    +E  IFDF + IYG+R  + F  ++RP+I F ++++L+  +G+D+ K +KI+  +
Sbjct: 250 DEDNRIEVNIFDFDKNIYGKRIRIEFLQFIRPDIYFHNLKELQKQLGKDKAKVKKIIPLT 309

Query: 313 Y 313
           +
Sbjct: 310 W 310


>gi|297183628|gb|ADI19754.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 312

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 148/310 (47%), Gaps = 13/310 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    +L +  +G  V IG FDG+HLGH  +L    K A     P TV++F P PR  + 
Sbjct: 5   IRGQHNLRSQHRGCAVTIGAFDGVHLGHQAVLAHLKKQALLLGIPTTVVTFEPLPREYL- 63

Query: 65  SSSPIFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +P+   +PP I     +  +LE  G   ++   F       +A QF++++ V+ L  +
Sbjct: 64  --TPLE--APPRITTLRDKWPLLEACGVDRVLCLPFNERLRQLTARQFVEQIFVDGLGAQ 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FG  R GD   ++   +++G+       L     + VSS+ IR AL  G  
Sbjct: 120 YLAFGDDFHFGNQREGDLEYVRALADEFGYAVAPTATL-EAAGERVSSTRIRAALDAGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +AA LLG  F +   V HG+K+GR L  PTAN+ L        GVYA+           
Sbjct: 179 DDAARLLGRPFELAGRVQHGQKLGRQLDAPTANIALHRIRSPLHGVYAVSVWGGGLERAH 238

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVAN G  PT+       LE  + + S ++YG+R TV F   LR E KF  +E LK  + 
Sbjct: 239 GVANVGVKPTIGECLEATLEVHVLEGSPDLYGERLTVRFRHKLREEQKFPSLEALKAGIK 298

Query: 300 EDEKKARKIL 309
            D+  A   L
Sbjct: 299 ADKANASAWL 308


>gi|148657855|ref|YP_001278060.1| riboflavin biosynthesis protein RibF [Roseiflexus sp. RS-1]
 gi|148569965|gb|ABQ92110.1| riboflavin kinase / FMN adenylyltransferase [Roseiflexus sp. RS-1]
          Length = 310

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 151/308 (49%), Gaps = 7/308 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
           NI      P + +  V+ IG FDG+H GH  ++   ++ A        VL+F+PHP  ++
Sbjct: 2   NIVYGLPQPINERPTVLTIGAFDGVHRGHAHLISTTVQRARALGRQAAVLTFDPHPDVVV 61

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +      TL+    + +++  +G   ++   FT E    +A +F+ + L   L ++ +  
Sbjct: 62  RPGKERPTLTTVVERAELIAALGVDLMVIIPFTRELMALTAHEFMAR-LCGALAIRELCI 120

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F  G+ R G+   L   G+ +G+ TV   E      + VSS+ IR AL  G +  A 
Sbjct: 121 GWDFALGRGREGNAERLATIGQTFGY-TVHRVEPFLLDGETVSSTRIRAALGDGDIAAAN 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVA 242
            LLGY +++   ++ G++ GRT+GFPTAN+ + P  +L   GVY  R      T Y  V 
Sbjct: 180 RLLGYPYSLRGPIVEGDRRGRTIGFPTANIHVDPRRMLPAHGVYVCRALLGGVT-YGAVT 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT        +E+++ DFS E+YG+   + F   LR E KF  I  L   +  D 
Sbjct: 239 NVGVRPTF-DGSRRTVEAYLLDFSDEVYGEELRLMFLHRLRGEQKFDGIAALVAQISRDV 297

Query: 303 KKARKILE 310
             AR  L+
Sbjct: 298 AAARDWLQ 305


>gi|309775467|ref|ZP_07670469.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916763|gb|EFP62501.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 319

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 9/284 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+HLGH  ++E+  ++A   N+   +++F P P  +I+    I  ++P   +
Sbjct: 24  TACIGYFDGLHLGHQKLIEEVKQVAEKRNTRSALITFEPDPWCVIKGLREIAHITPMKQR 83

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I E MG    I   F+ E A+ + + F ++VL   L + T++ G  F +G+   GD  
Sbjct: 84  MRIAEAMGIEYWIILDFSKEMADLTPQDFHERVLKP-LHLDTLVCGYDFHYGRKGEGDAR 142

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ++ +   F    IDE+ +   +I SS+ I   + +G +  AA  +G  + +E  V  
Sbjct: 143 QLQRQQD---FEVHIIDEVSSEHKKI-SSTRIEELIKEGSMEKAARFMGRWYDMEGSVKG 198

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G ++GR  GFPTAN+ L    ++ K+GVY    + Q  T +  + N G NPT      L 
Sbjct: 199 GSRVGRKHGFPTANLHLYELYVMPKKGVYVGAVKVQG-TWHKAMINVGNNPTYNYQEQLS 257

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           +E+ + DF ++IY +  T  F  Y+R E KF D + L   + +D
Sbjct: 258 IEAHLLDFDRDIYDEPVTFRFLSYIREEQKFHDADALHEQLKKD 301


>gi|227539722|ref|ZP_03969771.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240364|gb|EEI90379.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 327

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 153/310 (49%), Gaps = 28/310 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           L   VV IG FDG+H+GH  IL    E A KI  N    +L+F PHPR II        L
Sbjct: 13  LDCAVVTIGTFDGVHIGHQKILSHLKESAKKI--NGETVLLTFFPHPRLIINPDDDSLRL 70

Query: 73  SPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
               I+EK+  L   G   LI   FT + +N + E++I  VL+  L  K ++ G    FG
Sbjct: 71  IN-DIEEKVCHLANAGIDHLILTPFTRDFSNQTPEEYISNVLIGKLGTKKIVIGYDHHFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           KDR G    L+   E + +    I E   N    VSS+ IR +L KG++  A   LGY F
Sbjct: 130 KDRKGSLVDLEHFAEIFDYTVEQIPEQDINDVA-VSSTRIRESLIKGNIDTANQYLGYPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTS----------- 237
            +   VI G++IGRT+GFPTAN+ +     ++   G+YA+     D+             
Sbjct: 189 ELTGTVIRGDQIGRTIGFPTANLHVHEKHKLIPAYGIYAVEVEIFDKIEEVLTGRYTEKV 248

Query: 238 ----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                 G+   G  PT V      +E  +FDF+++IYG+   V F  ++R + +F+ IE 
Sbjct: 249 PFRKAKGMGYIGTRPT-VDGMTRNIEVSLFDFNEDIYGKTLKVKFLHFVRHDERFETIEI 307

Query: 294 LKIYMGEDEK 303
           +K  +  D+K
Sbjct: 308 MKEQIQADKK 317


>gi|307565824|ref|ZP_07628285.1| riboflavin biosynthesis protein RibF [Prevotella amnii CRIS 21A-A]
 gi|307345448|gb|EFN90824.1| riboflavin biosynthesis protein RibF [Prevotella amnii CRIS 21A-A]
          Length = 313

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 17/316 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ 64
           I +N  + N+L   V  IG FDG+H GH  ++E+  + A  S +   V++F+ HPR ++ 
Sbjct: 4   IYLNDEVNNYLPPLVATIGFFDGVHRGHRFLIEEVKQKARFSGMQSAVITFDNHPRQVLH 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
               +  LS  + + K++E  G    I   F    +   A+ F+Q +L E L V  +I G
Sbjct: 64  PHQHLSLLSSFTQKIKLIEATGVDICIILHFDKALSLLHAKDFMQSILSERLHVTKLIIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              +FG          Q+ G++ G   +   EL +NK  I SSS IR  +T G +  A  
Sbjct: 124 YDNKFGYGCKESFDDYQRYGQELGIEVIKATELNSNKEHI-SSSVIRRLITLGEIKAANK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSY 238
            LGY + IE  VI G   G  LG+PTAN+      QL P     EGVYA++ +T     +
Sbjct: 183 ALGYNYVIEGQVIEGYHNGHKLGYPTANIDRKTCFQLIP----AEGVYAVKVKTDLSPLW 238

Query: 239 -SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +G+   G  PT   NG  L +E+ IF+F+  +YG    VSF   +R + KF  +  L  
Sbjct: 239 LNGMLYIGVRPTY--NGKTLCIETNIFNFNNSLYGHNIKVSFIQRVRGDRKFDTLSALSS 296

Query: 297 YMGEDEKKARKILESS 312
            +  D+K+  +IL+ S
Sbjct: 297 QLANDKKQCEEILKES 312


>gi|295099644|emb|CBK88733.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium cylindroides
           T2-87]
          Length = 323

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 13/311 (4%)

Query: 7   IEIN-QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
           I IN + +P      V  IG FDG H GH  +++QAI+IA   N  +++++F+P P  I 
Sbjct: 4   IRINHKHIPPVFNKTVACIGYFDGFHKGHQQLVKQAIEIAQKKNIDVSIITFDPDPWHIF 63

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +    ++ L   S + ++ + +G        FT + A+ SA+QF    ++  + + T++ 
Sbjct: 64  KPEMKLYHLMSLSDKIQVSKSLGAQNFYILTFTKDFASLSADQFHD--VLHQMNIDTLVC 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F++G   AG+   L+K+     F  V +D + N  ++ +SSS I   + +G+V +A 
Sbjct: 122 GFDFQYGCKNAGNVETLKKQNL---FDVVVVDSI-NEDNKKISSSRIEPMILEGNVYDAN 177

Query: 184 HLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGV 241
           H+ GY ++I   ++HG K G T L  PTAN+ +  + ++   GVYA    + D T Y  +
Sbjct: 178 HMTGYIYSIHGKIVHGFKRGSTLLNIPTANLLVDEEYVIPNTGVYA-GCVSVDDTLYYAM 236

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G+NPT   N    +E+ I +F Q++Y +     F+  +R E KFK+I++LK  +  D
Sbjct: 237 INIGKNPTF-ENEIQTIEAHILNFDQDLYEKEVRFYFYKKIRDEKKFKNIDELKDQLVSD 295

Query: 302 EKKARKILESS 312
            K  + I+ SS
Sbjct: 296 IKTTQNIMTSS 306


>gi|225572735|ref|ZP_03781490.1| hypothetical protein RUMHYD_00924 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039908|gb|EEG50154.1| hypothetical protein RUMHYD_00924 [Blautia hydrogenotrophica DSM
           10507]
          Length = 309

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPI 69
           + +P  L+  V  +G FDG+H GH  ++++ + K        V +F+   R I+      
Sbjct: 13  EKIPQVLRCAV-TLGKFDGLHRGHQKLIQRVLEKKEQGLSAVVFAFDQSNRMILSHEE-- 69

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
                   +   LE MG    +         +   E F++++LV+ L V  +  G  FRF
Sbjct: 70  --------RRAKLETMGVDLFLECPLNERLRHMLPEVFVKEILVDRLHVGFLAVGQDFRF 121

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G +R G+  +LQK G++Y F    I +  + K +I SS+ +R  L +G V   A LLG  
Sbjct: 122 GYERKGNAQLLQKMGQQYDFQVEVIPDETDGKRKI-SSTYVREQLNEGKVEKVAELLGEY 180

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNP 248
           F+   +V+HG  +G     PT N+    + L+   GVY  + R  DQ  + G+ N G  P
Sbjct: 181 FSTTGEVLHGRGLGHRKLMPTTNLVPPKEKLMPPNGVYITKSRFGDQ-QFHGITNVGYKP 239

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     L +E+++F   Q +YGQ+  VSF  +LRPE +F  +EKLK  +  D +KA+  
Sbjct: 240 TVGAEEFLGVETYLFHCDQNLYGQKSVVSFLKFLRPERRFDSLEKLKAQLMADIEKAQNY 299

Query: 309 LESS 312
            E +
Sbjct: 300 FEET 303


>gi|114777734|ref|ZP_01452694.1| hypothetical protein SPV1_08701 [Mariprofundus ferrooxydans PV-1]
 gi|114551950|gb|EAU54484.1| hypothetical protein SPV1_08701 [Mariprofundus ferrooxydans PV-1]
          Length = 309

 Score =  145 bits (365), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M + H+ E   SL   LKGG + +GNFDG+H+GH  +L +    A +   P  V++F PH
Sbjct: 1   MQIIHSWEEAASLAE-LKGGAITVGNFDGVHMGHEQVLAETRGHAMDVGGPTIVVTFEPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L     + + L++ G  A++  +F    A +SAE+F  ++L +    
Sbjct: 60  PRAVLFPGEAPRRLCHVHERLQYLQQAGADAVLLLEFNKAMAAWSAEKF-SRMLFDTFAF 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG DR G    L+K G++ GF TV           +VSSS IR+A+    
Sbjct: 119 RHIHVGYDFAFGHDRQGHVDDLRKLGDEAGF-TVSEAAAFAMLGSVVSSSRIRSAVEAAD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG  + I  +V+HG+K GR + FPTAN+ +        G+YA+R   +++  +
Sbjct: 178 FTLAASLLGRDYAIAGEVLHGDKRGRQMNFPTANIDVGDLAHPPVGIYAVRANNKEK-QW 236

Query: 239 SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G A  G  PT   NG  LLLE+ + D S ++YGQ   V+F   +R + KF     L   
Sbjct: 237 LGAAYLGYRPTF--NGRTLLLETHLLDDSPDLYGQCLNVAFVQRIREDRKFTGHADLADQ 294

Query: 298 MGEDEKKARKIL 309
           +  D + AR+IL
Sbjct: 295 IALDCQAAREIL 306


>gi|300773863|ref|ZP_07083732.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760034|gb|EFK56861.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 327

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 153/310 (49%), Gaps = 28/310 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           L   VV IG FDG+H+GH  IL    E A KI  N    +L+F PHPR II        L
Sbjct: 13  LDCAVVTIGTFDGVHIGHQKILSHLKESAKKI--NGETVLLTFFPHPRLIINPDDDSLRL 70

Query: 73  SPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
               I+EK+  L   G   LI   FT + +N + E++I  VL+  L  K ++ G    FG
Sbjct: 71  IN-DIEEKVCHLANAGIDHLILTPFTRDFSNQTPEEYISNVLIGKLGTKKIVIGYDHHFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           KDR G    L+   E + +    I E   N    VSS+ IR +L KG++  A   LGY F
Sbjct: 130 KDRKGSLVELEHFAEIFDYTVEQIPEQDINDVA-VSSTRIRESLIKGNIDTANQYLGYPF 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTS----------- 237
            +   VI G++IGRT+GFPTAN+ +     ++   G+YA+     D+             
Sbjct: 189 ELTGTVIRGDQIGRTIGFPTANLHVHEKHKLIPAYGIYAVEVEIFDKIEEVLTGQYTEKV 248

Query: 238 ----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                 G+   G  PT V      +E  +FDF+++IYG+   V F  ++R + +F+ IE 
Sbjct: 249 PFRKAKGMGYIGTRPT-VDGMTRNIEVSLFDFNEDIYGKTLKVKFLHFVRHDERFETIEI 307

Query: 294 LKIYMGEDEK 303
           +K  +  D+K
Sbjct: 308 MKEQIQADKK 317


>gi|326382954|ref|ZP_08204644.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198544|gb|EGD55728.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 303

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 148/303 (48%), Gaps = 17/303 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDGIH GH  ++  A K A     P  +++F+PHP ++++S +    LS    +
Sbjct: 1   MVTIGVFDGIHRGHAQLIAAATKAAAERGVPSVLMTFDPHPSSVVRSGAYPPQLSTLRRR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++ E++G        F+   +  S E F+  VLVE L    V+ G  F FG    GD  
Sbjct: 61  AELAEELGIDVFCVIPFSPTLSAQSPEDFVHSVLVEELHAAEVVVGDNFTFGHKALGDVP 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++ GE++GF    I +L    +   SS+ IR+ +  G V  AA  LG    +E  V+H
Sbjct: 121 RLRELGERFGFEVTAI-KLFGEHAVTYSSTYIRSCVAAGDVELAAEALGRPHRVEGVVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS----------YSGVANFGRN 247
           GE+ GR LGFPTAN+       +  +GVYA  F   D  +          Y    + G N
Sbjct: 180 GERRGRDLGFPTANVAPPEHTAIPGDGVYAAWFTVLDSATEPEGITIGARYPAAVSVGTN 239

Query: 248 PTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT   +G +  +E+++ D S + YGQ   V F   LR    F  I+ L   M  D ++ R
Sbjct: 240 PTF--SGRVRTVEAYVLDVSADFYGQHVAVDFVSRLRGMEPFDSIDALIAEMNNDVERTR 297

Query: 307 KIL 309
            +L
Sbjct: 298 TLL 300


>gi|315652141|ref|ZP_07905139.1| riboflavin biosynthesis protein RibF [Eubacterium saburreum DSM
           3986]
 gi|315485633|gb|EFU76017.1| riboflavin biosynthesis protein RibF [Eubacterium saburreum DSM
           3986]
          Length = 316

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 12/312 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS- 65
           IN +  N  +   V IG FDG H GH  +       AN   +   V SF   P  ++++ 
Sbjct: 5   INTTDINITEKTAVVIGKFDGEHRGHRKLFRTLKDEANKKGLKTVVFSFRTLPSNVVKNK 64

Query: 66  -SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            ++ IFT      + K LE++G    I Y F +  A  + E+F++ +L++ L +  ++ G
Sbjct: 65  HTTQIFTNVE---RRKKLEELGIDYYIEYPFDMNIARLTGEEFLKDILIKKLGMAEIVAG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               FG  ++G+  +L +  +  GF    I + ++     +SS+ IR  L +G +  A  
Sbjct: 122 DDAAFGYKKSGNVELLNRLSKDLGFDVKIITKEKDEFQNDISSTLIRAKLDEGDMEEANK 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRT-QDQTSYSGVA 242
           LLG  ++I   V  G K+G  LGFPT N+   S   L K GVYA R R   D T Y G+ 
Sbjct: 182 LLGGVYSISGIVEEGNKLGAKLGFPTLNLFPSSGKHLPKSGVYASRVRIGDDDTLYLGLT 241

Query: 243 NFGRNPTMVPNGP---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           N G NP++  +       +E+++++F   +YG+   V  + Y+RPEIKF  +E LK  + 
Sbjct: 242 NVGSNPSIKDDKKDHIARVETYLYNFDASLYGREIEVYLYKYIRPEIKFDSLEALKSQIS 301

Query: 300 EDEKKARKILES 311
           +D+++    L S
Sbjct: 302 KDKEEVLNFLNS 313


>gi|28572342|ref|NP_789122.1| riboflavin biosynthesis protein [Tropheryma whipplei TW08/27]
 gi|28410473|emb|CAD66859.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase]
           [Tropheryma whipplei TW08/27]
          Length = 312

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 154/299 (51%), Gaps = 12/299 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            + IG FDG+HLGH  +LE+ + + N ++   V++F+  P+T  +       L     + 
Sbjct: 17  ALTIGKFDGVHLGHRRLLERIVALQNQDTSALVVTFDRDPKTFFKKDMSFVPLCSLEQKL 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE       +  +F  E A+ SAE F+ KVL+E L + +++ G  FRFG    GD  +
Sbjct: 77  SLLENCNIPNCLILRFDDEFASMSAEDFVHKVLLEKLNMSSIVIGDGFRFGARGLGDAML 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K   + GF+   I +++  K+ I SS+ IR  L+ G   NA+  LG        V+HG
Sbjct: 137 LEKLARELGFYLEVIPKIQFGKTNI-SSTLIRKFLSLGQAGNASSCLGRNHVCTGTVVHG 195

Query: 200 EKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTM--VPNG 254
           +K GR LGFPTAN  L  D+   +  +GVY  R  +    SY    + GRNPT   +   
Sbjct: 196 KKRGRELGFPTAN--LGKDVSGFIPADGVYIGRIIS--DRSYPAAVSIGRNPTFGDLEFS 251

Query: 255 PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +   +   D S  ++YG+R  V F  +LR  + +K I+ LK  +  D ++ ++   ++
Sbjct: 252 QIEAHALYEDISSLDLYGRRIDVEFIAHLRDTMLYKSIDSLKAAIRSDVERCKEYFSTT 310


>gi|319937192|ref|ZP_08011599.1| hypothetical protein HMPREF9488_02434 [Coprobacillus sp. 29_1]
 gi|319807558|gb|EFW04151.1| hypothetical protein HMPREF9488_02434 [Coprobacillus sp. 29_1]
          Length = 311

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 147/287 (51%), Gaps = 8/287 (2%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           AIG FDG+H+GH  ++ +  +++        +++F+ +P  ++        L+  + +  
Sbjct: 20  AIGFFDGLHIGHMALVNEVKRVSEQKGYKKALMTFDHYPLYVLGKIKEEKYLTSMNDRIS 79

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LEK G   L   KFT E A  S E FI + L++ L VK ++ G  FRFGK  AG+   L
Sbjct: 80  LLEKEGLDYLFIVKFTKEVAALSPEDFINQYLID-LHVKHIVCGFDFRFGKYNAGNTMTL 138

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           Q   +   F+   I E+   K + +SS+ IR  L +G++     LLG ++ +  +VI G 
Sbjct: 139 QACQQ---FNVSVIPEVLY-KGEKISSTRIRHVLEQGNIEEMNELLGRKYCVSGEVIKGR 194

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +IG  +GFPTAN+      L   GVY ++     Q  Y G+ N G NPT        LE 
Sbjct: 195 RIGHAIGFPTANVDYQSYFLPCHGVYIVKVYVHGQ-GYMGMCNIGYNPTFTALDKPSLEV 253

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            I DF  +IY Q   V F+  +R E  F   E+L   + ED++K R+
Sbjct: 254 NILDFDGDIYHQYMIVEFYCLIRKEKPFASKEELIAQLYEDKQKVRE 300


>gi|253755435|ref|YP_003028575.1| riboflavin biosynthesis protein [Streptococcus suis BM407]
 gi|251817899|emb|CAZ55665.1| putative riboflavin biosynthesis protein [Streptococcus suis BM407]
          Length = 307

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           H  E+NQ  P      V+ +G FDGIHLGH  +L++A K+A+     +TVL+F   PR  
Sbjct: 8   HYSELNQEEPT-----VLVLGYFDGIHLGHKALLDRARKVADEQGLTVTVLTFPESPRLA 62

Query: 63  IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               SP   L   S +++  +L+K G   LI   FT E AN + +QF+++  ++ L  + 
Sbjct: 63  FSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMER-YIKGLNAQI 121

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  + FG  RA  + +     E +      + E+     + VSS+ IR A+  G V 
Sbjct: 122 LVAGFDYHFGNCRADVKDLT----ELFDGQVEIVSEVSLGGEK-VSSTRIRQAIQSGDVS 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS 239
            A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D   Y 
Sbjct: 177 LANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DGKRYR 235

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L   M 
Sbjct: 236 AMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLMEQMK 294

Query: 300 EDEKKA 305
            DEK A
Sbjct: 295 SDEKFA 300


>gi|42519356|ref|NP_965286.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           NCC 533]
 gi|41583644|gb|AAS09252.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           NCC 533]
          Length = 312

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 164/300 (54%), Gaps = 9/300 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPI 69
           S P   K  ++ +G FDG+H+GH  +++ A  IA     P+ V++F+ HP+ I ++    
Sbjct: 11  SAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKHLPLMVMTFDKHPKEIYKNDHKF 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +E+ +EK+G   L+  KFT E +  S + F+ +V+++ L+  TV+ G  + +
Sbjct: 71  VYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLSPQDFVDQVVMK-LKADTVVVGFDYTY 129

Query: 130 G-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           G KD A    + +   +++    + ++  +      V S+ IR A+  G+V  AA LLG 
Sbjct: 130 GPKDIANVENLPKFAKDRF---KIVVEPKQAIDKIKVGSTYIRKAIQHGNVELAAELLGQ 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
            +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N
Sbjct: 187 PYETSGIIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKVNGKW-HDAMTSVGYN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 246 ETFKTNHGLTIETNIFDFDEEAYGKPLTLAWYKFIRKNKKFSGIEELSHQLDQDKRDIKQ 305


>gi|256847054|ref|ZP_05552500.1| riboflavin biosynthesis protein RibF [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715718|gb|EEU30693.1| riboflavin biosynthesis protein RibF [Lactobacillus coleohominis
           101-4-CHN]
          Length = 317

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 157/295 (53%), Gaps = 10/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDG+H GH  +L  A +IA   N P+ VL+++  P  +  Q   P+  L+    
Sbjct: 21  VLAMGFFDGVHRGHQQVLATARRIAEQQNQPLAVLTYDKLPAIVFKQLEQPVRYLTSLDR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L + G        FT      + + F+ +V+++ L+  TV+ G    +G     + 
Sbjct: 81  KLHLLAEFGVDVAYVMDFTSMVGELAPQTFVDEVIMK-LQPSTVVAGFDHTYGPKEIANM 139

Query: 138 GILQKRGE-KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             L +  + ++   TV   +L N+  +  +SS+ IR  + +G V NA  LLGYR+T    
Sbjct: 140 AKLPEYAQGRFAIKTV--SKLTNDNDETKISSTVIRQLIDQGAVANANQLLGYRYTTSGI 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++HG   GRT+GFPTAN+Q   +  +   GVYA+R + Q+Q  ++G+A+ G N T     
Sbjct: 198 IVHGFARGRTIGFPTANVQWPENERIPAVGVYAVRLKVQNQW-FNGMASVGYNVTFGKQT 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E  IFDF + IYG+   V +   LR E+KF D++ L   + +D+  + +IL
Sbjct: 257 NKTIEVNIFDFHRHIYGEHVQVQWVQRLRDEVKFADVDDLVEQLKKDQVASCRIL 311


>gi|296129363|ref|YP_003636613.1| riboflavin biosynthesis protein RibF [Cellulomonas flavigena DSM
           20109]
 gi|296021178|gb|ADG74414.1| riboflavin biosynthesis protein RibF [Cellulomonas flavigena DSM
           20109]
          Length = 336

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 165/328 (50%), Gaps = 23/328 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V+   E++Q +P      VV +GNFDG+H GH  +L + +    A  +    ++F PH
Sbjct: 1   MQVW--TEVSQ-VPTGWGPSVVTLGNFDGVHRGHVAVLRRMVDDARAAGAHAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L     + ++LE  G  A++   +TL+ A  + ++F+++ LV  L  
Sbjct: 58  PAQVHRPHDAPPLLLGDRDRIELLEATGLDAVLLVTYTLDFARQTPQEFVERYLVGALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-------QIVSSSNIR 171
           +TV+ G   RFG   +GD   ++  GE+YGF    I ++R +++       +  SS+ +R
Sbjct: 118 RTVVVGRDVRFGWQNSGDLSTMRGLGEQYGFDVEVIADVRPDETPDAGPAHRRWSSTWVR 177

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
             L  G V  AA +LG    +   V+HG+  GR LG+PTAN+  +  ++  +GVYA   R
Sbjct: 178 ELLVAGDVRAAADVLGRPHRVRGVVVHGDARGRELGYPTANLGATTGLVPADGVYAGWLR 237

Query: 232 TQDQTSYSGVA---------NFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDY 281
            + +   + V          + G NPT        +E+++ D +  ++YG+   +   + 
Sbjct: 238 REHRPDGTPVGQDRVLPAAVSIGTNPTF-EGRERRVEAYVLDRTDLDLYGEEVVLELVER 296

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LRP ++F  +++L   M  D +  R++L
Sbjct: 297 LRPTLRFDSVDELLARMAVDVEDVRRVL 324


>gi|239626264|ref|ZP_04669295.1| riboflavin biosynthesis protein RibF [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520494|gb|EEQ60360.1| riboflavin biosynthesis protein RibF [Clostridiales bacterium
           1_7_47FAA]
          Length = 326

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 146/280 (52%), Gaps = 9/280 (3%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +G FDG H GH  +L   + +K     P  + +F+  P T + S  P   ++    +
Sbjct: 17  IVTLGKFDGRHRGHQKLLRTMKELKQELGYPTAIFTFSIAPLTQM-SGQPQTVITTNMER 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +E+MG   L+ Y F  E      E F++ +L   +  + ++ G    FG   AG+  
Sbjct: 76  RANMERMGIDYLVEYPFNEEIRRMMPEDFVKDILAGRMGAREIVVGPDCSFGYQGAGNAE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   ++ G+H   I++ +++   I SS+ IR  L KG+V  A  LLG  ++I   V+H
Sbjct: 136 LLKHMEKELGYHLHVIEKEKDHMRDI-SSTYIREELEKGNVEKANALLGEPYSIHGKVVH 194

Query: 199 GEKIGRT-LGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           G  IG + LGFPTAN++  P I  L + GVY  R    D   Y GV N G+ PT+    P
Sbjct: 195 GNHIGSSILGFPTANLE-PPAIKRLPRFGVYVSRVLV-DNVYYRGVTNIGKKPTVEGQYP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           + +E++IFD  ++IYG    V    + RPE KF  +E+LK
Sbjct: 253 VGVETYIFDLDRDIYGDTIEVQLLAFDRPEQKFASLEELK 292


>gi|331090937|ref|ZP_08339779.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405159|gb|EGG84695.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 305

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 161/305 (52%), Gaps = 14/305 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHP 59
           M     IE N + P+H     + +G FDG+H GH  ++EQ  K A+      V SF+  P
Sbjct: 1   MRYIRGIE-NYNCPSHT---AITLGKFDGLHRGHQKLIEQVKKHADGQIKSVVFSFDMFP 56

Query: 60  --RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
             + + + +  + T     +  ++ E++ +  L+   F  +     AE FI++VL++   
Sbjct: 57  FFKELGKQNYILMTSEEKCL--RLEEQVDY--LVECPFVEKIHTMDAETFIKEVLMKKFH 112

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K V+ GT FRFG  + GD  +L+K  +  G+  + I++    + +I SS+ ++  + KG
Sbjct: 113 AKYVVVGTDFRFGYQKKGDIYLLEKYQQICGYKLIVIEKEMYGEREI-SSTFVKEEIHKG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQT 236
           ++  A  LLGY +TI   V HGEK+GR LGFPT N+  + + LL   GVY       D  
Sbjct: 172 NMELAEKLLGYPYTILGTVEHGEKLGRKLGFPTMNVIPAEEKLLSPNGVYVSSVMI-DGK 230

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G++N G  PT+      L+E+F+FD+ ++ YG++  +  + ++R E KF  +  L+ 
Sbjct: 231 EYRGISNVGCKPTVSDKKEKLVETFLFDYDEDAYGKKIQIRLYSFVREEKKFSSVSALQK 290

Query: 297 YMGED 301
            M  D
Sbjct: 291 QMRSD 295


>gi|108799065|ref|YP_639262.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. MCS]
 gi|119868180|ref|YP_938132.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. KMS]
 gi|126434668|ref|YP_001070359.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. JLS]
 gi|108769484|gb|ABG08206.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium sp. MCS]
 gi|119694269|gb|ABL91342.1| riboflavin kinase / FMN adenylyltransferase [Mycobacterium sp. KMS]
 gi|126234468|gb|ABN97868.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium sp. JLS]
          Length = 333

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 163/321 (50%), Gaps = 21/321 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
              +P      VV IG FDG+H GH  +++ A+K   +   P  +++F+PHP  ++   S
Sbjct: 15  QDDIPTDWGRCVVTIGVFDGVHRGHAELIDNAVKSGRSRGVPTVLMTFDPHPMEVVFPGS 74

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + E++I ++LVE L V  V+ G  F
Sbjct: 75  HPAQLTTLTRRAELVEELGIDVFLVMPFTADFMKLTPERYIHELLVERLHVVEVVVGENF 134

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG+  +L+K GE++GF       + E   +++   SS+ IR+ +  G V+ AA 
Sbjct: 135 TFGKKAAGNVELLRKAGERFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAGDVVAAAE 194

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ------ 235
            LG    +E  V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 195 ALGRPHRVEGVVVRGDGRGRGLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVMGT 252

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D + ++YGQ   V F   +R + KF  +
Sbjct: 253 VVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVAVDFVARIRGQEKFDSV 311

Query: 292 EKLKIYMGEDEKKARKILESS 312
           + L   MG D ++AR IL +S
Sbjct: 312 DDLIATMGTDTERARTILRNS 332


>gi|282848834|ref|ZP_06258227.1| riboflavin biosynthesis protein RibF [Veillonella parvula ATCC
           17745]
 gi|294791744|ref|ZP_06756892.1| riboflavin biosynthesis protein RibF [Veillonella sp. 6_1_27]
 gi|294793605|ref|ZP_06758742.1| riboflavin biosynthesis protein RibF [Veillonella sp. 3_1_44]
 gi|282581488|gb|EFB86878.1| riboflavin biosynthesis protein RibF [Veillonella parvula ATCC
           17745]
 gi|294455175|gb|EFG23547.1| riboflavin biosynthesis protein RibF [Veillonella sp. 3_1_44]
 gi|294456974|gb|EFG25336.1| riboflavin biosynthesis protein RibF [Veillonella sp. 6_1_27]
          Length = 310

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 154/296 (52%), Gaps = 7/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDGIH GH  ++ +A++  I+ +    +++F  HP TI+        +    I 
Sbjct: 18  VYALGTFDGIHRGHQRVIHKAVEEAISVDGVSIIITFEHHPLTILHPERVPKRVIQEEIM 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +LE++    ++R   T      +A++F+ + L   + V+ ++ G  F FG    G+  
Sbjct: 78  DTVLEELKVDYILRLPMTEALLKMTADEFLHE-LCNDMNVEAIVIGENFTFGAKGLGNPE 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +++         +    L  + S   +SS+ IR A+ +GH+ +A H LG  F  +  VI
Sbjct: 137 YMKQVVADKNIRVLVQPLLPCDGSSTPISSTEIRKAIHEGHLEDANHWLGRPFQFKGTVI 196

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G++ GRTLGFPT N+ L  ++    +GVYA R    D   Y GV N G NPT   N   
Sbjct: 197 KGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRV-CIDGIWYDGVGNIGDNPTF-RNQYH 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             E  +F+F Q+IYG+   V F  Y+R E+KF +++ L   M  DE++A  IL ++
Sbjct: 255 RCEVHVFNFDQDIYGKEVIVQFISYIRGEVKFNNLQDLIDQMKVDEEQALAILANA 310


>gi|168216969|ref|ZP_02642594.1| riboflavin biosynthesis protein RibF [Clostridium perfringens NCTC
           8239]
 gi|182380981|gb|EDT78460.1| riboflavin biosynthesis protein RibF [Clostridium perfringens NCTC
           8239]
          Length = 309

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFNKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|227499039|ref|ZP_03929176.1| riboflavin biosynthesis protein ribF [Acidaminococcus sp. D21]
 gi|226904488|gb|EEH90406.1| riboflavin biosynthesis protein ribF [Acidaminococcus sp. D21]
          Length = 312

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 160/310 (51%), Gaps = 15/310 (4%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ- 64
           E+NQ++   L     A+G FDG+H GH  ++      A    ++  V +F+ HP   ++ 
Sbjct: 9   ELNQAV---LPPSAAALGTFDGLHRGHQKVIHTTRAYAKEHGLSSLVFTFSNHPLAFLKP 65

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
              P   LS P  +  +LE+MG   L    FT E A+ SA+ F+   L+E   V+ V  G
Sbjct: 66  EKEPPRLLSNPD-KIALLEEMGIDILCNIPFTRELADLSADGFL--TLLEDKGVRAVGIG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           T F FG    G+   L K  EKY   T+    L      ++SS+ IR A+ +G +  A  
Sbjct: 123 TNFSFGAGGTGNVDFLNKVHEKYEL-TILTSPLLTLDGCVISSTQIRRAIGEGQIHKANF 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKE-GVYAIRFRTQDQTSYSGVA 242
           +LG  + I   V+HG+K GRTLGFPTAN+ L +  I + + GVYA   + +    Y  + 
Sbjct: 182 MLGRPYVIHGTVVHGDKRGRTLGFPTANISLMNAKIAIPQYGVYAGLVKAKG-AWYKAML 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G NPT      + LE+ +F F + +YG+  TV   + +R EI+F   E+L I   E +
Sbjct: 241 NVGNNPTF-DTEDIRLEAHLFGFDRNLYGETITVKLMEKIRDEIRFSSAEQL-IRQMEKD 298

Query: 303 KKARKILESS 312
           KKA  +++ S
Sbjct: 299 KKATLLMDFS 308


>gi|254482788|ref|ZP_05096025.1| riboflavin biosynthesis protein RibF [marine gamma proteobacterium
           HTCC2148]
 gi|214036869|gb|EEB77539.1| riboflavin biosynthesis protein RibF [marine gamma proteobacterium
           HTCC2148]
          Length = 295

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFNPHPR---TIIQSSSPIFTLS 73
           +  IG FDG+HLGH    H + E+A ++  + P  V+ F P PR   + +++ + I    
Sbjct: 1   MATIGAFDGVHLGHQAVIHHLKEKAAEL--DLPSVVIVFEPLPREYFSPVEAPARIM--- 55

Query: 74  PPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             S +EK   +  +G   ++R +F       SA+QF+  V    L  K ++ G  FRFG 
Sbjct: 56  --SFREKFQAMADLGVDRVLRIRFNEALRAMSAQQFVDDVFAAGLGAKYLVLGDDFRFGN 113

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR GD   +Q++GE +G+        +  + + +SS+ IR AL +     A  +LG  ++
Sbjct: 114 DRQGDVQFIQQQGESHGY-DAGPTPTQEWEGKRISSTRIRHALEQADFDRAETMLGRPYS 172

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   VI+G ++G+T+G PTAN++L        GVY +       T   GVAN G  PT+ 
Sbjct: 173 ISGKVIYGRQLGQTIGTPTANLELCRLRAPLAGVYVVEVSGAGMTGARGVANVGVRPTVN 232

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +    LE  + D   E+YGQ   V+F   LR E+KF  +++LK  +  D +  R
Sbjct: 233 DSIKANLEVHLLDREIELYGQHIEVTFRHKLRDEMKFDSVDELKTNIATDIENTR 287


>gi|332880978|ref|ZP_08448648.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332681152|gb|EGJ54079.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 314

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 152/310 (49%), Gaps = 10/310 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           I +   LP   +  V  IG FDG+H GH  ++ Q  + A    +   +++F  HPR ++Q
Sbjct: 4   ITLTDPLP--YQACVATIGFFDGVHRGHRFLIRQLTRYAAGHDLASLLITFRTHPRQVMQ 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           ++     L+    + + L   G    +   FT   A  SA +F+ ++L E L VK +I G
Sbjct: 62  AAYQPQLLTTYDEKCEQLTTTGADYCLTLDFTTALAALSARRFMVEILKEKLSVKVLIIG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG DR+       + G + G   V  D    ++   VSSS +R  L +G V  AA 
Sbjct: 122 YDHRFGHDRSEGFAEYVEYGRELGMEVVRADAFAMSEVN-VSSSMVRACLAEGEVGMAAR 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFR---TQDQTSYS 239
            L   + I   V+HG  +G  LGFPTAN+Q+  +  ++ K GVYA+  +     ++  + 
Sbjct: 181 CLTRPYEITGRVVHGFHVGHELGFPTANIQVEDAQKLIPKNGVYAVWVKGGTGGEEHVWG 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+ N G  PTM       +E  + DF+ ++YG   T+SF   LR E KF++   L   + 
Sbjct: 241 GMLNIGLRPTMENGENRTIEVHLLDFAGDLYGCCLTLSFVRRLRDEKKFRNKGDLVHQLR 300

Query: 300 EDEKKARKIL 309
           EDE   R IL
Sbjct: 301 EDEAMVRMIL 310


>gi|300087846|ref|YP_003758368.1| riboflavin biosynthesis protein RibF [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527579|gb|ADJ26047.1| riboflavin biosynthesis protein RibF [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 310

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 152/295 (51%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IG FDG+HLGH  +L + ++ A  S +T   ++F  HPR ++   S +  L+  + +
Sbjct: 18  ALTIGVFDGVHLGHQALLTETVRQATRSGLTPAAVTFTGHPRLVLGRHSELPHLTSLNQR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G + +    F+ E A  SA  FI  +L+E+L ++ +I G  F  G+DRAGD  
Sbjct: 78  LCLLRECGINHVATLTFSPELAELSASDFI-SLLLEYLSLRHLIIGPDFALGRDRAGDAD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +      F    I  +  +  + VSS+ IR A+    +     LLG  F +E  VIH
Sbjct: 137 YLHRLSRAKEFDLTIIPPVIIDGER-VSSTLIRRAMADSDMPRVRKLLGRCFALEGRVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           GE  G  L  PTAN++L  D  L  +GVYA R  T    +Y+ + N G  PT    G   
Sbjct: 196 GEGRGARLDIPTANLELEADQALPADGVYASR-TTIGNVTYASITNIGTRPTF-GTGRRT 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +E+ I +F+ ++Y +   V+  + +RPE+KF   + LK  +  D  +A  IL  +
Sbjct: 254 VETHIMNFNGDLYDRGLEVAIIEQIRPELKFDSPDALKKQIQSDITQAGHILAKA 308


>gi|118467591|ref|YP_886990.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium smegmatis str. MC2 155]
 gi|118168878|gb|ABK69774.1| riboflavin biosynthesis protein RibF [Mycobacterium smegmatis str.
           MC2 155]
          Length = 325

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 161/321 (50%), Gaps = 21/321 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSS 67
              +P      V+ IG FDG+H GH  ++  A+K   A   P+ +++F+PHP  ++   +
Sbjct: 7   QDEIPTDWGRCVLTIGVFDGVHRGHAELINHAVKAGRARGVPVVLMTFDPHPMEVVFPGN 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + E++I ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTSDFMKLTPERYIHELLVEHLHVVEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG+  +L+K GE++GF       + E   N++   SS+ IR  +  G ++ AA 
Sbjct: 127 TFGKKAAGNVDMLRKAGERFGFAVEAMSLVAEHHRNETVTFSSTYIRACVDAGDMVAAAE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ------ 235
            LG    +E  V+ G+  GR LGFPTAN  ++P +   +  +GVYA  F    Q      
Sbjct: 187 ALGRPHRVEGVVVRGDGRGRVLGFPTAN--VAPPMYSAIPADGVYAAWFTVLGQGPQVGT 244

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D   ++YGQ   V F   +R + KF  +
Sbjct: 245 VVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTFADLYGQHVAVDFVSRIRGQEKFDSV 303

Query: 292 EKLKIYMGEDEKKARKILESS 312
           + L + M  D ++AR IL  S
Sbjct: 304 DDLVVAMERDVERARTILRDS 324


>gi|218512929|ref|ZP_03509769.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli 8C-3]
          Length = 125

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 88/124 (70%)

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           K+GR LGFPTANM+L P+  L  G+YA+RFR QD T +  VA++GR PT+  NG  LLE+
Sbjct: 1   KLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLHDAVASYGRRPTVTENGAPLLET 60

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
           ++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +  DE++AR +L    PL E DR
Sbjct: 61  YLFDFSGDLYGQLCAVSFFGYMRPELKFDGLDPLVAQIKRDEEEARALLAGVKPLGELDR 120

Query: 321 IICF 324
            +CF
Sbjct: 121 KLCF 124


>gi|37524594|ref|NP_927938.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784018|emb|CAE12885.1| riboflavin kinase/FMN adenylyltransferase [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 314

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+           P+ V+ F P P            L+  
Sbjct: 15  RGCVLTIGNFDGVHRGHQALLKHLKHEGQRLGLPVMVMIFEPQPLEFFAKGHAPARLTRL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L + G   L+  KF    A  + E F+ ++LVE L VK +  G  FRFG+ R+G
Sbjct: 75  RDKAKYLAQCGVDYLLCVKFDRNFAANTPEAFVSRLLVEKLGVKFLAVGDDFRFGQSRSG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ GE YGF     +   ++  +I SS+ IR AL    ++ A  LLG+ ++I   
Sbjct: 135 DFAFLQRAGESYGFDVTSSESFCDDGLRI-SSTAIRQALQNDDLVLAETLLGHPYSICGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+HG+++G T+GFPTAN+ L   ++   GVY +           GVAN G  PT+   G 
Sbjct: 194 VVHGKRLGSTIGFPTANLPLKRLVVPVHGVYVVEVYGLGDQPLPGVANIGTRPTVSGQGQ 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             LE  + D   ++YG+   V     LR E +F  ++ LK  +  D   A++  +
Sbjct: 254 -QLEVHLIDTQMDLYGRYIDVVLRKKLRNEQRFASLDALKQQIANDLVAAKEFFK 307


>gi|123969004|ref|YP_001009862.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. AS9601]
 gi|123199114|gb|ABM70755.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. AS9601]
          Length = 307

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 154/292 (52%), Gaps = 5/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++     +  L  P+ +  I
Sbjct: 16  IAIGSFDGLHAGHRQLIKSVVEENQYTP-TIASFWPHPREVLYKEMRL-RLDLPNEKLSI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F +E +  SAE+F++ +L+  L+ K +  G  F+FG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDIELSKLSAERFVRDILINQLQAKNISVGANFKFGFRRSGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              +        I  L +   +I SSS IR  L K  + NA  +L   ++    V+ G+ 
Sbjct: 134 NMIKDTDIKLKIIPILEDKDGRI-SSSRIRNLLEKSDLNNAFKILNRPYSFNGKVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQT-SYSGVANFGRNPTMVPNGPLLLE 259
           IG+++G+PTAN+++     L  EGVYA     ++       V N G  PT+ P  P  +E
Sbjct: 193 IGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNKKIESVMNLGSQPTINPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + +   ++YG   +V   + LR +IKFK+I++L   +  D   A KI ++
Sbjct: 253 VHLINKDIDLYGLNLSVEPVEKLRSQIKFKNIDQLSNQIKIDRDNALKIFKN 304


>gi|224540973|ref|ZP_03681512.1| hypothetical protein CATMIT_00124 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526124|gb|EEF95229.1| hypothetical protein CATMIT_00124 [Catenibacterium mitsuokai DSM
           15897]
          Length = 309

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 157/296 (53%), Gaps = 7/296 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  ++ + +K    +   V+SF+ HP  +++      ++     ++++
Sbjct: 17  LAIGFFDGLHLGHMSLINEVLKYKGETKTAVMSFDVHPLCVLKGEKRQ-SIITLEEKKEL 75

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LEKMG   L+   FT E A  S + FI + L   L +K ++ G  F FG   +G+   L+
Sbjct: 76  LEKMGIDYLLVIHFTKEVAALSPQAFIDEYL-NKLPLKRLVCGYDFHFGDHNSGNIEDLK 134

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K+     F  +  D +  N+++ VSS+ I+  + +G +     LL   + ++  VIHG++
Sbjct: 135 KQS----FDLIVKDAVMYNETEKVSSTLIKKLMDQGMIAEVNTLLDRPYQVKGTVIHGKQ 190

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            GR +GFPT N+      L K GVY       +   Y G+AN G NPT      L LE  
Sbjct: 191 RGRLIGFPTLNIDYGMKYLPKRGVYGTIVEI-NHRYYIGMANIGMNPTFNDISRLSLEVN 249

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +FDF++++YG+   V+F+ Y R E  F  +E LK  + ED+K   ++++    L +
Sbjct: 250 VFDFNEDVYGKEVEVTFYLYKREETVFNGLEGLKTQLTEDKKYLSQVMKKYLTLYQ 305


>gi|332527598|ref|ZP_08403645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rubrivivax
           benzoatilyticus JA2]
 gi|332112001|gb|EGJ11978.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rubrivivax
           benzoatilyticus JA2]
          Length = 320

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 11/298 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPS 76
           G  + IGNFDG+H GH  +L   +  A +  +   V++F PHPR      +   + +P  
Sbjct: 16  GCALTIGNFDGVHRGHQAMLAMLVNEARHRGLASCVMTFEPHPRDFFARRAGDASRAPAR 75

Query: 77  I---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           I   ++K+  LE+ G   ++  +F    A+ + E F+++VL + L  + V+ G  FRFG 
Sbjct: 76  IATLRDKLAELERCGVDHVVVARFDERLASLAPEAFVEQVLQKNLNARYVLVGDDFRFGA 135

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R G   +L + G + GF    +     +  + VSSS +R AL  G +  AA LLG  ++
Sbjct: 136 RREGTYAMLDEAGTRLGFDVARMLSYEVHGLR-VSSSAVRDALAAGDMKRAAVLLGRPYS 194

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I    IHG K+GR LGF T N++         G++ +R     + +  GVA+ G  PT+ 
Sbjct: 195 ISGHAIHGRKLGRELGFRTLNLRFPHPRPAAGGIFVVRVYGLAERALPGVASLGTRPTVE 254

Query: 252 PNGPLLLESFIFDF---SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             G +LLE+   ++    +  YG+   V     L  E ++  +E L+  + +DE  AR
Sbjct: 255 NAGRVLLETHCLEWPLGPEAGYGRVLRVELLHKLHDERRYPSLEALREGIAQDEADAR 312


>gi|312111631|ref|YP_003989947.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y4.1MC1]
 gi|311216732|gb|ADP75336.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y4.1MC1]
          Length = 327

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 165/309 (53%), Gaps = 14/309 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A++IA        V++F+PHP  ++ +    +  ++P   
Sbjct: 21  VMALGYFDGIHLGHQKVIRTAVQIAAEKGYKSAVMTFHPHPSVVLGKKDKHVHLITPLKK 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+++ ++G   L   +FT   A    ++F+ + ++  L VK V+ G  F +G+   G  
Sbjct: 81  KEQLIGELGIDYLYIVEFTSSFAQLFPQEFVDQYII-GLHVKHVVAGFDFTYGRLGKGTM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L     +    TV I +L  +  +I SS+ +R  L  G V     LLG  + +E  V+
Sbjct: 140 ETLPFHSREQFTQTV-IPKLSIDGEKI-SSTYVRQLLKNGDVDQLPRLLGRFYEVEGTVV 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPN--G 254
            GE+ GRT+GFPTAN+ L  D LL   GVYA++ +      + GV N G  PT      G
Sbjct: 198 GGERRGRTIGFPTANIALKDDYLLPALGVYAVKVKIGSDI-FEGVCNVGYKPTFYSTREG 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA----RKILE 310
              +E  IFDF+++IYG+  T+ +   LR E KF  +++L   +  D++KA    R   E
Sbjct: 257 LPSIEVHIFDFAKDIYGETMTIEWHMRLRSEQKFAGVDELIAQIQRDKEKAQAYFRNFAE 316

Query: 311 SSYPLSERD 319
           ++  LS+++
Sbjct: 317 TTCILSQKE 325


>gi|110798760|ref|YP_696369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens ATCC 13124]
 gi|168211430|ref|ZP_02637055.1| riboflavin biosynthesis protein RibF [Clostridium perfringens B
           str. ATCC 3626]
 gi|182626386|ref|ZP_02954140.1| riboflavin biosynthesis protein RibF [Clostridium perfringens D
           str. JGS1721]
 gi|110673407|gb|ABG82394.1| riboflavin biosynthesis protein RibF [Clostridium perfringens ATCC
           13124]
 gi|170710563|gb|EDT22745.1| riboflavin biosynthesis protein RibF [Clostridium perfringens B
           str. ATCC 3626]
 gi|177908337|gb|EDT70885.1| riboflavin biosynthesis protein RibF [Clostridium perfringens D
           str. JGS1721]
          Length = 309

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|229552411|ref|ZP_04441136.1| FAD synthetase [Lactobacillus rhamnosus LMS2-1]
 gi|229314237|gb|EEN80210.1| FAD synthetase [Lactobacillus rhamnosus LMS2-1]
          Length = 315

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++    + +A   P+ V++F+ HP  + +  + + I  LS   
Sbjct: 21  VLTLGFFDGVHRGHQAVIQAGKRVALAKKLPLAVMTFDMHPAIVYRGVAKTAIRYLSTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  ++++ G   L    FT   A  S + F+   LV  L+   V+ G  + +GK    +
Sbjct: 81  EKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLVG-LKAAAVVAGFDYTYGKRAVAN 139

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             +L +  RG    F  V + +L  +  +I SS+ IR AL +G +  A  LLGY +    
Sbjct: 140 MALLPEYARGR---FEVVSVPKLAEDGKKI-SSTRIRDALDRGDIDTANELLGYVYLTTG 195

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HGE  GR LGFPT N+  L    L   G+YA+  +  D T Y G+A+ GRN T   +
Sbjct: 196 KVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKVDD-TWYLGMASIGRNVTFGDD 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   +  DE+  R+
Sbjct: 255 RAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALIAQLKTDEQTVRQ 308


>gi|16078730|ref|NP_389549.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309545|ref|ZP_03591392.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221313869|ref|ZP_03595674.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221318792|ref|ZP_03600086.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323064|ref|ZP_03604358.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|34395971|sp|P54575|RIBC_BACSU RecName: Full=Riboflavin biosynthesis protein ribC; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1592690|emb|CAB02559.1| FMN adenylyltransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634039|emb|CAB13540.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 316

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 19/305 (6%)

Query: 14  PNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-QS 65
           P+HL        V+A+G FDG+HLGH  ++  A +IA    +T  V++F+PHP  ++ + 
Sbjct: 9   PHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPHPSHVLGRD 68

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             P   ++P  +++KI  +E++G   L   KF    A+ S +QFI + ++  L V+  + 
Sbjct: 69  KEPKDLITP--LEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLNVQHAVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +GK   G    +    +     T+   E    + + +SSS IRTAL  G V  A 
Sbjct: 126 GFDFTYGKYGKGTMKTMPDDLDGKAGCTMV--EKLTEQDKKISSSYIRTALQNGDVELAN 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++     +  Y+GV 
Sbjct: 184 VLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEV-YNGVC 242

Query: 243 NFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           N G  PT     P    +E  +FDF+QE+YG    + ++  +R E KF  I++L   + +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLFDFNQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEK 302

Query: 301 DEKKA 305
           D+++A
Sbjct: 303 DKQEA 307


>gi|317133688|ref|YP_004093002.1| riboflavin biosynthesis protein RibF [Ethanoligenens harbinense
           YUAN-3]
 gi|315471667|gb|ADU28271.1| riboflavin biosynthesis protein RibF [Ethanoligenens harbinense
           YUAN-3]
          Length = 306

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 156/300 (52%), Gaps = 13/300 (4%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS-SPIFT 71
           LP+  +   V +G FDG+H+GH  ++  A +    +   +++F  HP  ++++  +P  T
Sbjct: 9   LPDMREPVAVILGMFDGVHVGHAAVIRAAQETGLRT--ALVTFTEHPAQVLKNRRAPELT 66

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            +    +E+I   M    LI   F     + SAE+FIQ VLV  +  K    G  + FG 
Sbjct: 67  TA--RQRERIFAAMQVDFLIYLDFKT-IKSLSAEEFIQNVLVP-IRTKAAFCGFNYTFGA 122

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
                   L++ GE+YGF  V +  + +     VSS+ IR  +  G + +AA LLG  FT
Sbjct: 123 GGKAGPAELERFGERYGFTAVRVPPVCDADGP-VSSTRIREQIVDGRMEDAARLLGRPFT 181

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +E  VIHG ++GR LG PT N ++ PD  +  + GVYA      D      VA+ G  PT
Sbjct: 182 LEFPVIHGRQLGRKLGIPTINQRI-PDGHVCPRYGVYAASALV-DGCWRDAVASVGVKPT 239

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            V +  +L E+FIFD+  ++Y +   V+   +LRPE +F  +E+LK  M  D + A+  L
Sbjct: 240 -VGSDDVLCETFIFDYDGDLYDRWIEVALHTFLRPEERFAGVEELKTQMERDIRHAKAWL 298


>gi|295399857|ref|ZP_06809838.1| riboflavin biosynthesis protein RibF [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978260|gb|EFG53857.1| riboflavin biosynthesis protein RibF [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 327

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 165/309 (53%), Gaps = 14/309 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDGIHLGH  ++  A++IA        V++F+PHP  ++ +    +  ++P   
Sbjct: 21  VMALGYFDGIHLGHQKVIRTAVQIAAEKGYKSAVMTFHPHPSVVLGKKDKHVHLITPLKK 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+++ ++G   L   +FT   A    ++F+ + ++  L VK V+ G  F +G+   G  
Sbjct: 81  KEQLIGELGIDYLYIVEFTSSFAQLFPQEFVDQYII-GLHVKHVVAGFDFTYGRLGKGTM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L     +    TV I +L  +  +I SS+ +R  L  G V     LLG  + +E  V+
Sbjct: 140 ETLPFHSREQFTQTV-IPKLSIDGEKI-SSTYVRQLLKNGDVDQLPRLLGRFYEVEGTVV 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTM--VPNG 254
            GE+ GRT+GFPTAN+ L  D LL   GVYA++ +      + GV N G  PT      G
Sbjct: 198 GGERRGRTIGFPTANIALKDDYLLPALGVYAVKVKIGSDI-FEGVCNVGYKPTFHSTREG 256

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA----RKILE 310
              +E  IFDF+++IYG+  T+ +   LR E KF  +++L   +  D++KA    R   E
Sbjct: 257 LPSIEVHIFDFAKDIYGETMTIEWHMRLRSEQKFAGVDELIAQIQRDKEKAQAYFRNFAE 316

Query: 311 SSYPLSERD 319
           ++  LS+++
Sbjct: 317 TTCILSQKE 325


>gi|115352609|ref|YP_774448.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia ambifaria AMMD]
 gi|115282597|gb|ABI88114.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia ambifaria
           AMMD]
          Length = 345

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 76  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLH 130

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 131 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAG 190

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 191 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 250

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 251 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 310

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 311 IALDVANAR 319


>gi|229490813|ref|ZP_04384648.1| riboflavin biosynthesis protein RibF [Rhodococcus erythropolis
           SK121]
 gi|229322203|gb|EEN87989.1| riboflavin biosynthesis protein RibF [Rhodococcus erythropolis
           SK121]
          Length = 326

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 19/312 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S   
Sbjct: 10  VPADWGRCVLTIGVFDGVHRGHAQLIARAVTAARKRGVPSVLMTFDPHPMEVVRPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++ + +G        FT +    + E+++ ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLQRRAELAQDLGIDVFCVMPFTADFMKLTPERYVHEILVERLHVAEVVVGDNFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K   G+  +L++ G ++GF    + +L    +   SS+ IR+ +  G +  A   LG   
Sbjct: 130 KKALGNVDLLREMGARFGFAVDGV-QLLAEHAVTFSSTYIRSCVDAGDMEAATEALGRPH 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---------- 237
            +E  V+HG+K GR LGFPTAN  ++P +   +  +GVYA  F                 
Sbjct: 189 RVEGVVVHGDKRGRELGFPTAN--VAPPMFSAIPADGVYAAWFTVLGAGEELGTVVPGRR 246

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT        +E+++ D   ++YGQ   V     +R   KF  IE L   
Sbjct: 247 YQAAVSVGTNPTF-SGRTRTVEAYVLDTEADLYGQHVAVDLVSRIRGMEKFDSIESLITA 305

Query: 298 MGEDEKKARKIL 309
           M  D ++AR+IL
Sbjct: 306 MNRDVERARRIL 317


>gi|167561856|ref|ZP_02354772.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia oklahomensis EO147]
          Length = 330

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S E F++  LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVEHTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGAKRAGNFASLKAAGERHGFEVEQMETLADADGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +         
Sbjct: 176 DLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|157413831|ref|YP_001484697.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9215]
 gi|157388406|gb|ABV51111.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9215]
          Length = 307

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 156/292 (53%), Gaps = 5/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++     +  L  P+ +  I
Sbjct: 16  IAIGSFDGLHAGHRQLIKSVVEENQYTP-TIASFWPHPREVLYKEMRL-RLDLPNEKLSI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F ++ +  SAE+F++ +L+  L+ K +  G  F+FG  R+GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDMKLSKLSAERFVRDILINQLQAKNISVGANFKFGFRRSGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              +        I  L + + +I SSS IR  L K  + NA  +L   ++    V+ G+ 
Sbjct: 134 NIIKDTDIKLKIIPILEDKEGRI-SSSRIRDLLEKSDLKNAFKILNRPYSFNGRVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQT-SYSGVANFGRNPTMVPNGPLLLE 259
           IG+++G+PTAN+++     L  EGVYA     ++       V N G  PT+ P  P  +E
Sbjct: 193 IGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNKKIESVMNLGSQPTINPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + +   ++YG   +V   + LR +IKFK+I++L   + +D   A KI ++
Sbjct: 253 VHLINKDIDLYGLNLSVEPVEKLRSQIKFKNIDQLSNQIKKDRDNALKIFKN 304


>gi|260591392|ref|ZP_05856850.1| riboflavin biosynthesis protein RibF [Prevotella veroralis F0319]
 gi|260536758|gb|EEX19375.1| riboflavin biosynthesis protein RibF [Prevotella veroralis F0319]
          Length = 359

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 158/312 (50%), Gaps = 23/312 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS---SPIFTLSP- 74
           V  IG FDG+H GH  ++   I  A+   +   V++F+ HPR ++++S          P 
Sbjct: 47  VATIGFFDGVHRGHQYLIRNVINEAHQVGMVSAVITFDEHPRQVLKASLGKEEDVNSRPE 106

Query: 75  --PSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              S+ EK+L   K G   +I   F +  A+ SA +F++ VL   L V+ ++ G   RFG
Sbjct: 107 LLSSLDEKLLLLSKTGIDKVIVLHFDVALADLSAREFMEDVLCNQLNVRKLLIGYDNRFG 166

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNN----KSQIVSSSNIRTALTKGHVLNAAHLL 186
            +R+      ++ GE+ G     I+ + NN      + +SSS IRT + +G ++ A H L
Sbjct: 167 HNRSEGFDDYKRYGEQLG-----IEVIHNNAYLPDGEKISSSRIRTYIKEGDIVRANHCL 221

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYS-GVAN 243
           GY +TI S ++ G + G  LGFPTAN+ ++    +L   GVYA+  +      +  G+ N
Sbjct: 222 GYDYTISSKIVSGFQNGHKLGFPTANLDINACQQLLPMRGVYAVMVQLDHSLVWKRGMMN 281

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+ PT        LE  IF+F   +YGQ  ++ F   +R E KF  +E L   + +D+ 
Sbjct: 282 IGKRPTF-DGTKETLEVNIFNFEGNLYGQDISIRFISKIRDERKFDSLEALSQQLEQDKH 340

Query: 304 KARKILESSYPL 315
               + +  +P+
Sbjct: 341 TINALFDRRHPM 352


>gi|167569078|ref|ZP_02361952.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia oklahomensis C6786]
          Length = 330

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 14/304 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S E F++  LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVEHTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL  G
Sbjct: 116 TRWIMVGDDFCYGAKRAGNFASLKAAGERHGFEVEQMETLADADGARISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +         
Sbjct: 176 DLDAAARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARA 295

Query: 298 MGED 301
           + +D
Sbjct: 296 IAQD 299


>gi|54025860|ref|YP_120102.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nocardia
           farcinica IFM 10152]
 gi|54017368|dbj|BAD58738.1| putative riboflavin kinase [Nocardia farcinica IFM 10152]
          Length = 319

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 21/317 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSP 68
             +P      V+ IG FDG+H GH  ++ +A+K   A   P  +++F+PHP  +++  S 
Sbjct: 8   DDVPADWGRCVLTIGVFDGVHRGHAQLISRAVKSAAARGVPAVLMTFDPHPMEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + +++E++G        FT +    +  +++  +LVE L V  V+ G  F 
Sbjct: 68  PAQLTTLTRRAELVEELGIDVFCVMPFTQDFMKLTPARYVHDLLVERLHVAEVVVGDNFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK  AG    +++ G+++GF    + +L    +   SS+ IR  +  G +  AA  LG 
Sbjct: 128 FGKKAAGTVDTMRELGQRFGFEVDGV-KLVGEHAVTFSSTYIRACVDAGDMRAAAEALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFR-----------TQD 234
              +E  V+HG+  GR LGFPTAN  ++P +   +  +GVYA  F            T  
Sbjct: 187 PHRVEGVVVHGDGRGRELGFPTAN--VAPPMYAAIPADGVYAGWFTVLGPGPTIGTVTPG 244

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + + + + + G NPT        +E+++ D   ++YGQ   V F ++LR   KF  ++ L
Sbjct: 245 ERAMAAI-SVGTNPTFSGRA-RTVEAYVIDGQADLYGQHVAVDFVEHLRGMEKFDGLDSL 302

Query: 295 KIYMGEDEKKARKILES 311
              M  D   AR+IL +
Sbjct: 303 IAAMRRDVDNARRILTA 319


>gi|313893719|ref|ZP_07827286.1| riboflavin biosynthesis protein RibF [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313441733|gb|EFR60158.1| riboflavin biosynthesis protein RibF [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 310

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 149/297 (50%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDGIH GH  ++ +A++ A   N    +++F  HP TI+        L    I 
Sbjct: 18  VYALGTFDGIHRGHQRVIRKAVEEAASVNGVSIIITFEHHPLTILHPERVPKRLIQEDIL 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ++E +    ++R   T    N  A++F+   L +   V+ ++ G  F FG    G+  
Sbjct: 78  NTVIESLQVDYILRLPMTEALLNMRADEFLD-ALCKDTNVEAIVVGENFTFGAKGLGNPE 136

Query: 139 ILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            +++         V +  L   +  S  +SS+ IR A+ +G + +A H LG  F  +  V
Sbjct: 137 YMKQVLADKAIQ-VLVQPLLPCDGLSTPISSTEIRKAIREGRLEDATHWLGRPFQFKGTV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G++ GRTLGFPT N+ L  ++    +GVYA R    D   Y GV N G NPT   N  
Sbjct: 196 IKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRV-CIDGIWYDGVGNVGDNPTF-KNQY 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              E  +FDF Q+IYG+   V F  YLR E+KF +++ L   M  DE++A  IL  +
Sbjct: 254 HRCEVHVFDFDQDIYGKEVIVQFISYLRGEVKFNNLQDLIDQMKVDEEQALAILAKA 310


>gi|146320970|ref|YP_001200681.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis 98HAH33]
 gi|253751862|ref|YP_003025003.1| riboflavin biosynthesis protein [Streptococcus suis SC84]
 gi|253753685|ref|YP_003026826.1| riboflavin biosynthesis protein [Streptococcus suis P1/7]
 gi|145691776|gb|ABP92281.1| FAD synthase [Streptococcus suis 98HAH33]
 gi|251816151|emb|CAZ51775.1| putative riboflavin biosynthesis protein [Streptococcus suis SC84]
 gi|251819931|emb|CAR46020.1| putative riboflavin biosynthesis protein [Streptococcus suis P1/7]
 gi|319758217|gb|ADV70159.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis JS14]
          Length = 307

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           H  E+NQ  P      V+ +G FDG+HLGH  +L++A K+A+     +TVL+F   PR  
Sbjct: 8   HYSELNQEEPT-----VLVLGYFDGLHLGHKALLDRARKVADEQGLTVTVLTFPESPRLA 62

Query: 63  IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               SP   L   S +++  +L+K G   LI   FT E AN + +QF+++  ++ L  + 
Sbjct: 63  FSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMER-YIKGLNAQI 121

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  + FG  RA  + +     E +      + E+     + VSS+ IR A+  G V 
Sbjct: 122 LVAGFDYHFGNCRADVKDLT----ELFDGQVEIVSEVSLGGEK-VSSTRIRQAIQSGDVS 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS 239
            A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D   Y 
Sbjct: 177 LANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DGKRYR 235

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L   M 
Sbjct: 236 AMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLMEQMK 294

Query: 300 EDEKKA 305
            DEK A
Sbjct: 295 SDEKFA 300


>gi|146318767|ref|YP_001198479.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis 05ZYH33]
 gi|145689573|gb|ABP90079.1| FAD synthase [Streptococcus suis 05ZYH33]
 gi|292558432|gb|ADE31433.1| FAD synthetase [Streptococcus suis GZ1]
          Length = 337

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           H  E+NQ  P      V+ +G FDG+HLGH  +L++A K+A+     +TVL+F   PR  
Sbjct: 38  HYSELNQEEPT-----VLVLGYFDGLHLGHKALLDRARKVADEQGLTVTVLTFPESPRLA 92

Query: 63  IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               SP   L   S +++  +L+K G   LI   FT E AN + +QF+++  ++ L  + 
Sbjct: 93  FSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMER-YIKGLNAQI 151

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  + FG  RA  + +     E +      + E+     + VSS+ IR A+  G V 
Sbjct: 152 LVAGFDYHFGNCRADVKDLT----ELFDGQVEIVSEVSLGGEK-VSSTRIRQAIQSGDVS 206

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS 239
            A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D   Y 
Sbjct: 207 LANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DGKRYR 265

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L   M 
Sbjct: 266 AMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLMEQMK 324

Query: 300 EDEKKA 305
            DEK A
Sbjct: 325 SDEKFA 330


>gi|239826661|ref|YP_002949285.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           sp. WCH70]
 gi|239806954|gb|ACS24019.1| riboflavin biosynthesis protein RibF [Geobacillus sp. WCH70]
          Length = 327

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 171/327 (52%), Gaps = 27/327 (8%)

Query: 12  SLPNHLKG-----GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII- 63
           S P+H+K       V+A+G FDGIHLGH  ++  A+ IA        V++F+PHP  ++ 
Sbjct: 7   SHPHHIKKEKLPPTVMALGYFDGIHLGHQEVIRTAVNIAAEKGYKSAVMTFHPHPSVVLG 66

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +       ++P   +E+++ ++G   L   +FT   A    +QF+ + ++ +  VK V+ 
Sbjct: 67  KKEQHTHFITPLKKKEQLIAQLGVDFLYIVEFTPAFAQLFPQQFVDQYIIGF-HVKHVVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +G+   G    L          TV + +L     +I SS+ +R  L  G V    
Sbjct: 126 GFDFTYGRLGKGTMETLPFHSRDQFTQTV-VPKLSIAGEKI-SSTYVRKLLKNGEVEQLP 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVA 242
            LLG  + +E  V++GE+ GRT+GFPTAN+ L+ D LL   GVYA++ +      + GV 
Sbjct: 184 RLLGRFYEVEGTVVNGERRGRTIGFPTANIALNDDYLLPAVGVYAVKVKI-GTAVFEGVC 242

Query: 243 NFGRNPTM------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           N G  PT       +PN    +E  IFDF+++IYG+  T+ +   LR E KF  +++L  
Sbjct: 243 NVGYKPTFHSTREGMPN----IEVHIFDFAKDIYGETMTIEWHVRLRSEQKFASVDELVA 298

Query: 297 YMGEDEKKA----RKILESSYPLSERD 319
            +  D++KA    R   E++  LS+++
Sbjct: 299 QIKRDKEKAQAYFRNFTENTCILSQKE 325


>gi|217967600|ref|YP_002353106.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
 gi|217336699|gb|ACK42492.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
          Length = 529

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 154/287 (53%), Gaps = 15/287 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSF-NPHPRTIIQSSSPIFTLSPPSI 77
           V+ IG FDG+HLGH  I+++ +  A  N     V++F N   + + + SS + T      
Sbjct: 22  VITIGVFDGLHLGHSSIVDELVNNALLNGFNSGVITFENAFSQNLKKISSFLLTY----- 76

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            EKI  L   G    I   F+ E  N S+E FI KVL+  + +  +  G+ F FGKDR G
Sbjct: 77  DEKINLLSLKGVDYSIILPFSKEIKNLSSEDFI-KVLLNTIPISCICVGSNFFFGKDRMG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L   GEKY F+ V I  L    S I+SSS+IR  L  G +  A  LLGY++ I   
Sbjct: 136 NINTLLSLGEKYNFN-VKIVPLEKGNSDIISSSHIRNLLLNGEINMANDLLGYKYFINGV 194

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V  G+ +G  +GFPT N++ + + L+ K G+Y  + + + +  Y+     G+ PT     
Sbjct: 195 VEKGDNLGSKIGFPTVNVKYNKEKLIPKAGIYKGKVKIK-KNIYNAAIYIGKRPTF-HGK 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            L +E++I DFS  +YG+   ++  DY+RP+ KF  IE LK  + +D
Sbjct: 253 ELRVEAYIIDFSDYLYGEEIEIALEDYIRPDQKFDSIEALKRQIQKD 299


>gi|226306129|ref|YP_002766089.1| flavokinase/FAD synthetase [Rhodococcus erythropolis PR4]
 gi|226185246|dbj|BAH33350.1| flavokinase/FAD synthetase [Rhodococcus erythropolis PR4]
          Length = 326

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 19/312 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S   
Sbjct: 10  VPADWGRCVLTIGVFDGVHRGHAQLIARAVTAARKRGVPSVLMTFDPHPMEVVRPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++ + +G        FT +    + E+++ ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLQRRAELAQDLGIDVFCVMPFTADFMKLTPERYVHEILVERLHVAEVVVGDNFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K   G+  +L++ G ++GF    + +L    +   SS+ IR+ +  G +  A   LG   
Sbjct: 130 KKALGNVDLLREMGARFGFAVDGV-QLLAEHAVTFSSTYIRSCVDAGDMEAATEALGRPH 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---------- 237
            +E  V+HG+K GR LGFPTAN  ++P +   +  +GVYA  F                 
Sbjct: 189 RVEGVVVHGDKRGRELGFPTAN--VAPPMFSAIPADGVYAAWFTVLGAGEELGTVVPGRR 246

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT        +E+++ D   ++YGQ   V     +R   KF  IE L   
Sbjct: 247 YQAAVSVGTNPTF-SGRTRTVEAYVLDTEADLYGQHVAVDLVSRIRGMEKFDSIESLITA 305

Query: 298 MGEDEKKARKIL 309
           M  D ++AR+IL
Sbjct: 306 MNRDVERARQIL 317


>gi|171319740|ref|ZP_02908828.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria MEX-5]
 gi|171095012|gb|EDT40035.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria MEX-5]
          Length = 330

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLQKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IALDVANAR 304


>gi|291484222|dbj|BAI85297.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. natto BEST195]
          Length = 316

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 19/305 (6%)

Query: 14  PNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-QS 65
           P+HL        V+A+G FDG+HLGH  ++  A +IA    +T  V++F+PHP  ++ + 
Sbjct: 9   PHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGLTLAVMTFHPHPSHVLGRD 68

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             P   ++P  +++KI  +E++G   L   KF    A+ S +QFI + ++  L V+  + 
Sbjct: 69  KEPKDLITP--LEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLNVQHAVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +GK   G    +    +     T+   E    + + +SSS IRTAL  G V  A 
Sbjct: 126 GFDFTYGKYGKGTMKTMPDDLDGKAGCTMV--EKLTEQDKKISSSYIRTALQNGDVELAN 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++     +  Y+GV 
Sbjct: 184 VLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEV-YNGVC 242

Query: 243 NFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L   + +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEK 302

Query: 301 DEKKA 305
           D+++A
Sbjct: 303 DKQEA 307


>gi|218131405|ref|ZP_03460209.1| hypothetical protein BACEGG_03021 [Bacteroides eggerthii DSM 20697]
 gi|217986337|gb|EEC52674.1| hypothetical protein BACEGG_03021 [Bacteroides eggerthii DSM 20697]
          Length = 308

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +   I   + LPN     V  IG FDG+H GH  ++EQ  + A    +  +V++F  H
Sbjct: 1   MQLHTEISGKELLPN-----VATIGFFDGVHRGHRFLIEQVCEAAAVRGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    +  +L   G    I   FT + A  SA+QF+  VL    +V
Sbjct: 56  PRKVMHPDFHSELLTTCDEKTALLADTGIDYCIMLDFTPDLARLSAKQFM-AVLKGDYQV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+ D     + G++ G   +      NN+   VSSS IR  L +G 
Sbjct: 115 QALVIGYDHRFGHNRSEDFDDYVRYGQELGMEVILAQAYSNNE-MTVSSSAIRHLLLEGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ ++ P+ L+  +GVYA+      + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDPEKLVPADGVYAVNVFL-GEA 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF F  +IY Q   +SF    R E+KF  IE+L  
Sbjct: 233 KHTGMLSIGYRPTLNNGLDRSIEVHIFHFDADIYDQPMRISFIRRTRSELKFDSIEELIE 292

Query: 297 YMGEDEKKARKIL 309
            + +DE +   IL
Sbjct: 293 QLHKDEAEITAIL 305


>gi|296269049|ref|YP_003651681.1| riboflavin biosynthesis protein RibF [Thermobispora bispora DSM
           43833]
 gi|296091836|gb|ADG87788.1| riboflavin biosynthesis protein RibF [Thermobispora bispora DSM
           43833]
          Length = 315

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 17/320 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H ++    +P      VV IG FDG+HLGH  ++ +A+ +A     P   ++F+PH
Sbjct: 1   MQSWHGLD---EVPGDWGRSVVTIGVFDGVHLGHQRLVGRAVGLARELGLPAVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++L  +G  A+   +FTLE +  S ++F+Q  LV+ L  
Sbjct: 58  PDEVVRPGSHPPLLTGLRRRIELLASLGVDAVCVLRFTLELSRMSPDEFVQTALVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD   L+  GEKY F    +  + N  +  +SS+ IR  +  G 
Sbjct: 118 AHVVVGENFRFGHKAAGDVETLRTLGEKYDFAAEGVPLVSNGVA--ISSTLIRERVAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-KEGVYAIRFR-TQDQ 235
           V  AA  LG    +E  V+ G + GR  LGFPTAN++  P   +  +GVYA     TQ  
Sbjct: 176 VAGAAAALGRPHRVEGVVVRGHQRGRALLGFPTANVESPPHTAIPADGVYAGWLECTQRP 235

Query: 236 TSYSG-----VANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
           + Y G       + G NPT        +E++  D    ++YG    V F + LR  ++F+
Sbjct: 236 SPYEGERWPAAISIGTNPTF-EGRERTVEAYALDRDDLDLYGAHVAVDFAERLRDTLRFE 294

Query: 290 DIEKLKIYMGEDEKKARKIL 309
            IE L   M ED ++ R+++
Sbjct: 295 SIEALIAQMREDVEQVRRLI 314


>gi|294500893|ref|YP_003564593.1| riboflavin biosynthesis protein RibC [Bacillus megaterium QM B1551]
 gi|295706239|ref|YP_003599314.1| riboflavin biosynthesis protein RibC [Bacillus megaterium DSM 319]
 gi|294350830|gb|ADE71159.1| riboflavin biosynthesis protein RibC [Bacillus megaterium QM B1551]
 gi|294803898|gb|ADF40964.1| riboflavin biosynthesis protein RibC [Bacillus megaterium DSM 319]
          Length = 318

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 9/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++  A ++A+   I   V++F PHP  ++ ++   I  ++P   
Sbjct: 21  VLALGYFDGVHLGHQQVINSAKQLADEKGIASAVMTFTPHPSVVLGRNVQHIDMITPLQE 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++K++E+MG   L    F  + A    ++F+ + ++  L V+ V+ G  + +GK   G  
Sbjct: 81  KKKLIEEMGIDFLYIVHFDKQFAALLPQEFVDQYII-GLNVQHVVAGFDYTYGKLGKGTM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            IL     +  F    ID+L N + +I SS+ IR  L  G +     LLG  + +   V 
Sbjct: 140 EILPFHS-RSKFTQTTIDKLTNGEEKI-SSTLIRENLANGDMHRVKELLGRYYEVSGTVT 197

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-GP 255
           HGEK GR +GFPTAN+ L  + LL + GVYA+  +   +  Y+GV N G  PT   N   
Sbjct: 198 HGEKRGRQIGFPTANIALDDEYLLPRIGVYAVELQLHGKW-YAGVCNVGYKPTFHDNLEK 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E  +  F ++IY Q  TV +   +R E KF  IE+L   + +D+++A    E 
Sbjct: 257 PTIEVHLLSFDEQIYDQHVTVKWHRMIRSEKKFSGIEELVGQISKDKEEALAYFEG 312


>gi|321315434|ref|YP_004207721.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis BSn5]
 gi|320021708|gb|ADV96694.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis BSn5]
          Length = 316

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 19/305 (6%)

Query: 14  PNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-QS 65
           P+HL        V+A+G FDG+HLGH  ++  A +IA    +T  V++F+PHP  ++ + 
Sbjct: 9   PHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPHPSHVLGRD 68

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             P   ++P  +++KI  +E++G   L   KF    A+ S +QFI + ++  L V+  + 
Sbjct: 69  KEPKDLITP--LEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLNVQHAVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +GK   G    +    +     T+   E    + + +SSS IRTAL  G V  A 
Sbjct: 126 GFDFTYGKYGKGTMETMPDDLDGKAGCTMV--EKLTEQDKKISSSYIRTALQNGDVELAN 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++     +  Y+GV 
Sbjct: 184 VLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEV-YNGVC 242

Query: 243 NFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L   + +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEK 302

Query: 301 DEKKA 305
           D+++A
Sbjct: 303 DKQEA 307


>gi|168207526|ref|ZP_02633531.1| riboflavin biosynthesis protein RibF [Clostridium perfringens E
           str. JGS1987]
 gi|170661138|gb|EDT13821.1| riboflavin biosynthesis protein RibF [Clostridium perfringens E
           str. JGS1987]
          Length = 309

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I        L   
Sbjct: 14  KSTYIALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGSPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|325109288|ref|YP_004270356.1| riboflavin kinase; FMN adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
 gi|324969556|gb|ADY60334.1| riboflavin kinase; FMN adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
          Length = 313

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 7/308 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
           +I+++ P   + G V+IGNFDG+H GH  +L   ++ A   + P   ++F+P P  +I  
Sbjct: 6   DISEAEP--FRNGAVSIGNFDGVHRGHQAMLSALVEQARRLDGPALAMTFDPPPVALISP 63

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +     LS    + +++ K+G  AL+ Y    E  + +A+ F Q+++++ L+ K ++ G 
Sbjct: 64  AKVPPRLSTVERKAELMSKLGVDALLVYPTNREFLSLTADDFFQQIVLQQLQAKGMVEGD 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG++R+G   +L+   E+ G     I  +   + +++SS+ IR  +  G V  A  L
Sbjct: 124 NFCFGRNRSGTADVLRDYCERSGLELRIISPVTAGE-KVISSTRIRELIRHGSVSEAIEL 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + +   V+ G + GR +GFPTAN+     ++   GVYA R    D  + +   N G
Sbjct: 183 LGHPYQLTGKVVSGARRGRLIGFPTANLAEVTTLIPSPGVYAGRCEV-DGRAIAAAINIG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT        +E  +     ++YGQ+ +V  F   R   +F   E L++ + +D  + 
Sbjct: 242 PNPTFAEQ-EHKIEIHLIGHDGDLYGQQLSVELFTECRKIKQFDSAESLRLQLEKDIAQI 300

Query: 306 RKILESSY 313
            ++ +  +
Sbjct: 301 EQLFQERF 308


>gi|172061471|ref|YP_001809123.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia ambifaria MC40-6]
 gi|171993988|gb|ACB64907.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           MC40-6]
          Length = 330

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IALDVANAR 304


>gi|169342677|ref|ZP_02863718.1| riboflavin biosynthesis protein RibF [Clostridium perfringens C
           str. JGS1495]
 gi|169299183|gb|EDS81253.1| riboflavin biosynthesis protein RibF [Clostridium perfringens C
           str. JGS1495]
          Length = 309

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I        L   
Sbjct: 14  KSTYIALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|329956640|ref|ZP_08297213.1| riboflavin biosynthesis protein RibF [Bacteroides clarus YIT 12056]
 gi|328524012|gb|EGF51088.1| riboflavin biosynthesis protein RibF [Bacteroides clarus YIT 12056]
          Length = 306

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 161/313 (51%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +   I   + LP+     V  IG FDG+H GH  ++EQ  K A    +  +V++F  H
Sbjct: 1   MQLCSRISGKELLPS-----VATIGFFDGVHRGHRFLIEQVCKAAAARGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q       L+    +  +L   G    +   FTL+ A  SA+QF+  +  ++ +V
Sbjct: 56  PRKVMQPGFHPELLTTCDEKVALLAGTGVDYCVMLDFTLDLARLSAKQFMAALKQDY-QV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G + G   V + +  +  +  VSSS +R  L +G+
Sbjct: 115 QALVIGYDHRFGHNRSEGFDDYVRYGRELGME-VILAQAYSTDAMTVSSSAVRRLLLEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ +  S  ++  +GVYA+ +    + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDSEKLVPADGVYAV-YVFLGEK 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF+F  +IY Q   +SF    RPE+KF  I +L  
Sbjct: 233 KHTGMLSIGYRPTLNNGIDRSIEVHIFNFDADIYDQPMRLSFVRRTRPELKFDSIGELIA 292

Query: 297 YMGEDEKKARKIL 309
            + +DE +   IL
Sbjct: 293 QLHKDEAEITAIL 305


>gi|319645946|ref|ZP_08000176.1| RibC protein [Bacillus sp. BT1B_CT2]
 gi|317391696|gb|EFV72493.1| RibC protein [Bacillus sp. BT1B_CT2]
          Length = 298

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 155/299 (51%), Gaps = 10/299 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS-SPIFTLSPPSIQ 78
           +A+G FDG+HLGH  ++  A   A    +  +V++F+PHP  +++    P   ++P   +
Sbjct: 1   MALGYFDGVHLGHQQVILTAKNTAAREGVKTSVMTFHPHPSAVLKKGREPKDLITPLQDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I+E +G   L    FT E A+ S E+FI + ++ +  V  V+ G  F FGK   G   
Sbjct: 61  ISIIEDLGVDFLYVVTFTPEFASLSPEEFIDQYILGF-HVTHVVAGFDFTFGKFGKGTME 119

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             Q+  +     T       +N+ Q VSS+ IR+ L  G V  AA LLG  + ++  VIH
Sbjct: 120 NFQEYAKGRVKSTSVAK--YSNQDQKVSSTRIRSVLGAGDVEYAAELLGRPYHVKGFVIH 177

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-- 255
           G+K GRT+GFPTAN+ L    I+   GVYA++        Y+GV N G  PT     P  
Sbjct: 178 GDKRGRTIGFPTANIGLKDTYIVPPTGVYAVKAEIGGAV-YNGVCNVGYKPTFYEKRPGQ 236

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             +E  +FDF ++IYG    V ++  LR E KF  +++L   +  D+++A +      P
Sbjct: 237 PSIEVNLFDFDRDIYGSEIKVEWYKRLRSEKKFGSVDELVEQISRDKEEAIRFFRERKP 295


>gi|305681221|ref|ZP_07404028.1| riboflavin biosynthesis protein RibF [Corynebacterium matruchotii
           ATCC 14266]
 gi|305659426|gb|EFM48926.1| riboflavin biosynthesis protein RibF [Corynebacterium matruchotii
           ATCC 14266]
          Length = 322

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 158/324 (48%), Gaps = 19/324 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++H I     +P  L G VV IG FDG+H GH  +L  A   A+    P  +L+F+PH
Sbjct: 1   MDIWHGI---TEVPKDLTGSVVTIGVFDGMHRGHSRLLAAATTRAHELGLPSILLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L   + +  +    G   ++   F +  A  S E+F  +++ + L+ 
Sbjct: 58  PLAVLRPDRMPPLLGTVTQRASLAAAQGIDHILAMSFNVAVAQLSPEEFFLQIVRDTLKA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G+ F FGK  AG   +L++ G KYG     ID L  + + ++ S+ IR  L +G 
Sbjct: 118 RAVVVGSNFTFGKKAAGTTEVLRELGHKYGIEVHVIDLLVEDDA-VICSTLIRRLLGEGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYA--------- 227
           V  A   LG  F++  +V+ G  + GR LGFPTAN+  S  + L ++ VYA         
Sbjct: 177 VREANAALGREFSVAGEVVRGAGRGGRELGFPTANLYFSDLVALPQDAVYAGWLMVISQA 236

Query: 228 -IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
            I    +    Y    + G NPT   +    +ES++   + ++YG    V F D++R   
Sbjct: 237 PIDGDMKQGVRYPAAISVGHNPTF-GDKRRSVESYVIGKNADLYGHTVVVEFVDWVRSME 295

Query: 287 KFKDIEKLKIYMGEDEKKARKILE 310
           KF  + +L   + +D  +  +ILE
Sbjct: 296 KFTGVPELLAAIHQDVAETLRILE 319


>gi|78067312|ref|YP_370081.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia sp. 383]
 gi|77968057|gb|ABB09437.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia sp. 383]
          Length = 330

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    LQ  G +YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLQAAGAQYGFEVEQMGTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           +  D   AR          ERDR
Sbjct: 296 IALDVANARAY------FIERDR 312


>gi|310778666|ref|YP_003966999.1| riboflavin biosynthesis protein RibF [Ilyobacter polytropus DSM
           2926]
 gi|309747989|gb|ADO82651.1| riboflavin biosynthesis protein RibF [Ilyobacter polytropus DSM
           2926]
          Length = 313

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 10/315 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +  NI    +  PN      VAIG+FDGIH GH  ++  A+K A   N    V +F  
Sbjct: 1   MKIIENIFTTEEKFPNTY----VAIGSFDGIHSGHKEVICSAVKRAKEKNGKSVVFTFAN 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++  +     ++    +  ILE MG   +I   F  E +  +   F+++VL E L 
Sbjct: 57  HPMEVVDKNRAPKLINSKEEKIHILEDMGVDYIIFQPFDNEFSTMAPFDFVEEVLKEKLS 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +  G  F FG+        L + G+        I  ++ +  +++SS+ IR  +TKG
Sbjct: 117 AKEIFVGFNFSFGEGGVAKTDDLIELGKAVNIKVNKIPPVKID-DRVISSTLIRKLITKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQT 236
            +      LGY   I  +VIHG+K GR +GFPTAN+ +   +    G+Y    + + D+ 
Sbjct: 176 DLDRVKEYLGYPVFIIGEVIHGKKYGRKMGFPTANLSILNKVYPPFGIYGASVKIEGDEK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  V N GRNPT+ P G   +E  I DF + IYG++  V    +LR E +F  +++LK 
Sbjct: 236 EHDAVVNIGRNPTLKP-GEQSIEVHILDFDEYIYGKKLYVKLVKFLREEKRFSSMDELKK 294

Query: 297 YMGEDEKKARKILES 311
            +  D    +  LE 
Sbjct: 295 VIRNDVMTWKNYLEE 309


>gi|116072359|ref|ZP_01469626.1| Riboflavin kinase / FAD synthetase [Synechococcus sp. BL107]
 gi|116064881|gb|EAU70640.1| Riboflavin kinase / FAD synthetase [Synechococcus sp. BL107]
          Length = 279

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 4/261 (1%)

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           +V+SF PHPR ++   + +  L  P  +  +L  +G   L+   FT E A  SAE+F   
Sbjct: 17  SVVSFWPHPREVLFGETRL-RLDLPHEKLSLLGPLGIEQLVLVPFTKELAQLSAEEFADS 75

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           VL+E L+ K +  GT FRFG  RAGD  +LQ+   + G   V I E+  +    +SSS I
Sbjct: 76  VLLETLQAKRIAVGTNFRFGHRRAGDAELLQRLAHRRGV-DVRIVEIVEDADGRMSSSRI 134

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIR 229
           R+AL +G +  A  LLG  +  +  V+ G  +GR +G+PTAN+Q+     L   GVYA  
Sbjct: 135 RSALEQGALTQAEALLGRPYRFQGTVVRGRGLGREIGWPTANLQVDGRKFLPGLGVYAAW 194

Query: 230 FRTQD-QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
            +    +     V N G  PT+ PN P  +E  + D + E+  +   V     LR + KF
Sbjct: 195 VQLDGAEDVMPAVMNLGPQPTVDPNSPSAVEVHLLDRNLELEHRELVVEPVHRLRGQQKF 254

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +++L   +G D + AR++L
Sbjct: 255 NGLQELSAQIGHDAEAARQLL 275


>gi|318062239|ref|ZP_07980960.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. SA3_actG]
 gi|318077164|ref|ZP_07984496.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. SA3_actF]
          Length = 320

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 10/316 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  AL+   FT E +  S   F + VL E L  K V+ G  FR
Sbjct: 68  PPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHAKVVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G +  F    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D+   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVADEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R   KF  I++L   M +D K
Sbjct: 247 GTNPQFDAKH-RTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDELLTAMADDVK 305

Query: 304 KARKILESSYPLSERD 319
           ++R ++ + Y  + +D
Sbjct: 306 RSRALI-AEYEANHQD 320


>gi|333024098|ref|ZP_08452162.1| putative bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Tu6071]
 gi|332743950|gb|EGJ74391.1| putative bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Tu6071]
          Length = 314

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 10/316 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PHP  +++  S 
Sbjct: 2   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPHPSEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  AL+   FT E +  S   F + VL E L  K V+ G  FR
Sbjct: 62  PPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHAKVVVEGPNFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G +  F    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 122 FGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVAEGDVAGAAEI 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D+   + + + 
Sbjct: 182 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVADEAMPAAI-SV 240

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R   KF  I++L   M +D K
Sbjct: 241 GTNPQFDAKH-RTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDELLTAMADDVK 299

Query: 304 KARKILESSYPLSERD 319
           ++R ++ + Y  + +D
Sbjct: 300 RSRALI-AEYEANHQD 314


>gi|227890221|ref|ZP_04008026.1| FAD synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849223|gb|EEJ59309.1| FAD synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 312

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 164/300 (54%), Gaps = 9/300 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           S P   K  ++ +G FDG+H+GH  +++ A  IA   N P+ V++F+ HP+ I ++    
Sbjct: 11  SAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAKQKNLPLMVMTFDKHPKEIYKNDHKF 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     +E+ +EK+G   L+  KFT E +  S + F+ +V+++ L+  TV+ G  + +
Sbjct: 71  VYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLSPQDFVDQVVMK-LKADTVVVGFDYTY 129

Query: 130 G-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           G KD A    + Q   +++    + ++  +      V S+ IR A+  G+V  A  LLG 
Sbjct: 130 GSKDIANVENLPQFAKDRF---KIVVEPKQAIDKIKVGSTYIRKAIQHGNVELAVELLGQ 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
            +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N
Sbjct: 187 PYETSGVIVHGFRRGHKIGFPTANIEISGSKVLPAEGVYATRAKINGKW-HDAMTSVGYN 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T   N  L +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 246 ETFKTNHGLTIETNIFNFDEEAYGEPLTLAWYKFIRKNKKFSGIEELSHQLDQDKRDIKQ 305


>gi|325265387|ref|ZP_08132111.1| riboflavin biosynthesis protein RibF [Clostridium sp. D5]
 gi|324029388|gb|EGB90679.1| riboflavin biosynthesis protein RibF [Clostridium sp. D5]
          Length = 303

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 18/285 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + +G FD +H GH  ++ +    A    +   V +F+    T++ +      L      
Sbjct: 17  AITLGKFDSLHRGHQKLISRVRDSAEKEKLKSIVFAFDMKRDTLLTNRERRQHL------ 70

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
                K     +I   FT E     AE FI++VLV  L    ++ GT F FG  + GD G
Sbjct: 71  -----KQQVDCMIECPFTKEIREMEAETFIEEVLVNTLHASHIVVGTDFGFGHGKRGDAG 125

Query: 139 ILQKRGEKYGFHTVFID-ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           +L +  EKY +    ++ EL N +   +SS+ +R AL  G V  A  LLGY + +   V 
Sbjct: 126 MLAEYAEKYNYQLDVVEKELYNGRE--ISSTYVREALEAGDVKLANQLLGYPYHMSGLVE 183

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG ++GRTLGFPT N+  +   I+ + GVY    +  D  +Y G+ N G  PT+     L
Sbjct: 184 HGRRLGRTLGFPTMNITPAERKIVPRFGVYTCGIQV-DGVNYHGIGNVGIKPTVTDEPRL 242

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           L E F+F F  + YG+   V F  ++RPE KF  +E+LK  +  D
Sbjct: 243 LTEVFVFGFKGDAYGKEIRVKFCSFVRPETKFCSVEELKKQVDRD 287


>gi|295836224|ref|ZP_06823157.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB74]
 gi|295825912|gb|EDY46191.2| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB74]
          Length = 320

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 9/306 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  AL+   FT E +  S   F + VL E L  K V+ G  FR
Sbjct: 68  PPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHAKVVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G +  F    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVTLLAELGREDDFEVDLVDLYVSGDAGDGQPFSSTLTRRLVAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D+   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVADEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R   KF  I+ L   M ED K
Sbjct: 247 GTNPQFDAK-HRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDVLLTAMAEDVK 305

Query: 304 KARKIL 309
           ++R ++
Sbjct: 306 RSRALI 311


>gi|15806031|ref|NP_294732.1| riboflavin kinase/FMN adenylyltransferase [Deinococcus radiodurans
           R1]
 gi|6458736|gb|AAF10583.1|AE001952_11 riboflavin kinase/FMN adenylyltransferase [Deinococcus radiodurans
           R1]
          Length = 297

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 146/295 (49%), Gaps = 21/295 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG+FDG+HLGH  +L Q    A     P  V +F+P  R ++Q    + TL P  + 
Sbjct: 16  VIAIGSFDGVHLGHQALLAQLKARAREYRVPSVVYTFDPPTRVLMQGVEFLSTL-PEKLD 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    I   FT E A    E F+  +    ++ + V+ G  F FGK RAG   
Sbjct: 75  --LLRLYGIDETIAVPFTPEFAARPKEAFLADLRA--MKPRAVVVGEDFYFGKGRAGSTA 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            L++         V  D +     Q+    + S+ IR  L +G V  A  LLG  +  + 
Sbjct: 131 DLRE---------VCADVVSLPMHQLGGDDIKSTRIRALLKEGDVDGAQRLLGRPYDAQG 181

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+ G++IGRTLG+PTAN+++S    L  GV+A++        + G+AN G  PT V   
Sbjct: 182 VVVRGDQIGRTLGWPTANLRVSEGKALPLGVFAVQVVNDKGERWGGMANVGWRPT-VEGR 240

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               E  +FD+  ++YG+   V F   LR E KF  +++LK  +G D + AR  L
Sbjct: 241 ERRFEVHLFDYQGDLYGEELQVKFLSRLRGEQKFSGLDELKAQLGRDAEAARAAL 295


>gi|223557978|gb|ACM90984.1| riboflavin biosynthesis protein RibF [uncultured bacterium URE4]
          Length = 293

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 11/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +   G FDG+HLGH L++E+ + +A        V++F PHPR ++Q  +    L   S++
Sbjct: 2   IATTGFFDGVHLGHRLVIERLVSLARERGDESLVVTFWPHPRAVLQDGARELRLLN-SLE 60

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK  +L  +G   +    FT   A  +AEQ+++ +L +   V T++ G   R G DR   
Sbjct: 61  EKKGLLRNLGVDRVEVLDFTRSFAALTAEQYLRDILRDRFGVTTLLMGYDNRLGSDRL-T 119

Query: 137 RGILQKRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              L+      G   V ++        Q V+++ IR +L +G V  A+ +LGY + ++  
Sbjct: 120 AASLKPIASSIGIELVELEPFGMGEHPQTVAATVIRKSLEEGKVETASEMLGYGYALKGV 179

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+ G ++GRT+GFPTANM+L   + L    GVY +      +  Y G+ N G  PT V  
Sbjct: 180 VVAGNRLGRTIGFPTANMKLYEPLKLVPGRGVYVVEAEVLGK-KYRGMTNIGLRPT-VGG 237

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I DF ++IYG    ++F   LR E+ F  +E LK  + +D +  R+
Sbjct: 238 SFTTIETHILDFDEDIYGLPLRITFLRRLRDEVHFPSLEALKDQLEKDRECCRE 291


>gi|170697698|ref|ZP_02888786.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           IOP40-10]
 gi|170137446|gb|EDT05686.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           IOP40-10]
          Length = 330

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IALDVANAR 304


>gi|312869003|ref|ZP_07729180.1| riboflavin biosynthesis protein RibF [Lactobacillus oris
           PB013-T2-3]
 gi|311095429|gb|EFQ53696.1| riboflavin biosynthesis protein RibF [Lactobacillus oris
           PB013-T2-3]
          Length = 323

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 11/304 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDG+H GH  ++  A KIA   N P+ VL+++  P  +       F  LS    
Sbjct: 21  VLAMGFFDGVHRGHQEVIGTAKKIAQERNLPLAVLTYDHAPGIVYHQYPDGFDYLSTTKR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGD 136
           + ++LE++G   +    FT   A+ S E F+   L +    + V+ G    +G KD A  
Sbjct: 81  KLELLEELGVDLVYLVSFTSAYASLSPEDFVTDYL-QAFHSQVVVAGFDHTYGTKDVATM 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +      ++   TV    L       V S  IR  +  G V  A   LGYR+     V
Sbjct: 140 ERLPMYAAGRFEVVTVPKFTLSGQSGAKVGSRQIRQLIATGQVGAANTALGYRYQTSGLV 199

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRTLGFPTAN++   + L+   GVYA+  +  D+  Y G+A+ G N T      
Sbjct: 200 VHGLARGRTLGFPTANIEAPQEELIPGIGVYAVEVKVGDRW-YGGMASVGHNITFGKAAK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL----ES 311
           L +E ++FDF Q IYG+   V ++ YLR E KF   ++L   M  DE  AR++L     S
Sbjct: 259 LTVEIYLFDFKQMIYGEEVRVRWYQYLRGEEKFAGADELVAQMHHDETNARRVLADASRS 318

Query: 312 SYPL 315
            +PL
Sbjct: 319 DWPL 322


>gi|198282849|ref|YP_002219170.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218668108|ref|YP_002425049.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247370|gb|ACH82963.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218520321|gb|ACK80907.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 310

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 159/318 (50%), Gaps = 31/318 (9%)

Query: 1   MHVFHNIEINQS--LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           MH F +   N++  LP       V+IGNFDG+H GH  +L    K   +S  P  VL+F 
Sbjct: 1   MHSFLHHRSNRAADLPQ-----AVSIGNFDGVHRGHQALL----KTMQDSGLPTAVLTFE 51

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           P PR   +++     LS  S++EK+  L   G  ++    F    AN  AE FI ++LV 
Sbjct: 52  PLPREFFRAADAPPRLS--SLREKVVALRHNGVQSITCLPFNQALANLPAEDFITQILVR 109

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSN 169
            L    +  G  FRFG  R GD  +L + G +YGF         +D       Q VSS+ 
Sbjct: 110 QLCCGLLSVGHDFRFGARRRGDLDMLSRFGRQYGFSVKEQPPFLLD------GQRVSSTG 163

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           IR  L  G + +AA  LG  + +   V+HG+ +GR LGFPTAN+ L+   +  +G++A R
Sbjct: 164 IRAFLQSGDLTHAASWLGRPYALCGRVVHGDHLGRELGFPTANIPLNRRPVPVKGIFAGR 223

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKF 288
             +  + ++    + G  PT V    ++LE+   D  S ++YGQ+ +V     LR E K+
Sbjct: 224 LLSP-KGNWIAAVSIGLRPT-VGGKQMVLEAHCLDADSPDLYGQQVSVELHHKLRDEEKY 281

Query: 289 KDIEKLKIYMGEDEKKAR 306
            D++ LK  +  D    R
Sbjct: 282 MDLDTLKAAIDNDVVNTR 299


>gi|199597093|ref|ZP_03210525.1| FAD synthase [Lactobacillus rhamnosus HN001]
 gi|258508603|ref|YP_003171354.1| riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus GG]
 gi|199591897|gb|EDY99971.1| FAD synthase [Lactobacillus rhamnosus HN001]
 gi|257148530|emb|CAR87503.1| Riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus GG]
 gi|259649910|dbj|BAI42072.1| FAD synthase [Lactobacillus rhamnosus GG]
          Length = 315

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++   ++A     P+ V++F+ HP  + +  + + I  LS   
Sbjct: 21  VLTLGFFDGVHRGHQAVIQAGKQVALEKKLPLAVMTFDMHPAIVYRGVAKTAIRYLSTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  ++++ G   L    FT   A  S + F+   LV  L+   V+ G  + +GK    +
Sbjct: 81  EKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLVG-LKAAAVVAGFDYTYGKRAVAN 139

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             +L +  RG    F  V + +L  +  +I SS+ IR AL +G +  A  LLGY +    
Sbjct: 140 MALLPEYARGR---FEVVSVPKLAEDGKKI-SSTRIRDALDRGDIDTANELLGYVYLTTG 195

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HGE  GR LGFPT N+  L    L   G+YA+  +  D T Y G+A+ GRN T   +
Sbjct: 196 KVVHGEARGRLLGFPTINLATLGQQRLPGIGIYAVTVKVDD-TWYLGMASIGRNVTFGDD 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   +  DE+  R+
Sbjct: 255 RAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALIAQLKTDEQTVRQ 308


>gi|108761824|ref|YP_633926.1| riboflavin biosynthesis protein RibF [Myxococcus xanthus DK 1622]
 gi|108465704|gb|ABF90889.1| riboflavin biosynthesis protein RibF [Myxococcus xanthus DK 1622]
          Length = 308

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 150/298 (50%), Gaps = 13/298 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS--SSPIFTLSP 74
           L G  +A+GNFDG+H+GH  +  +A +    +  T   FNPHP  ++Q   +  + TL P
Sbjct: 14  LAGQALALGNFDGVHVGHQALFAEARRHGRAAAFT---FNPHPGKVLQPELAPKLITLLP 70

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             ++  + E++G  A +   F+ E A      F +  L + L V  V+ G+ F +G  R 
Sbjct: 71  RKLE--LFEELGLDAAVVQPFSREYARTPPADF-EAALFDALGVAHVVVGSDFTYGSARR 127

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L++   + G     +  +  +   + SSS +R  + +G V  A  LLG  F ++ 
Sbjct: 128 GTAETLREAAARRGATVHVVPPVTVD-GVVASSSRVREYILEGRVSAARRLLGRPFDLDG 186

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ---TSYSGVANFGRNPTMV 251
            V+ G   GR +GFPTAN+    ++    GVYAIR +   +   T + G AN G  PT  
Sbjct: 187 TVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVQLPGESKGTWHGGAANIGVKPTF- 245

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               + +E+ + DF+ ++YG+   V F D LRPE +F  + +L   +  D + AR ++
Sbjct: 246 GGTEVTIEAHLLDFTGDLYGKELRVQFLDRLRPEQRFGSVVELTGQIKRDVEAARAVI 303


>gi|213646631|ref|ZP_03376684.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
          Length = 286

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 136/261 (52%), Gaps = 6/261 (2%)

Query: 49  PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQ 106
           P+ V+ F P P  +  +      L+   ++EK+  L + G   ++  KF    A  +A+ 
Sbjct: 22  PVVVMIFEPQPLELFATDKAPARLT--RLREKLHYLAQCGVDYVLCVKFDRRFAALTAQT 79

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF             +I S
Sbjct: 80  FISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-S 138

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVY
Sbjct: 139 STAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVY 198

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
           A+           GVAN G  PT V      LE  + D   ++YG+   V     +R E 
Sbjct: 199 AVEVTGLGDKPLPGVANIGTRPT-VAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQ 257

Query: 287 KFKDIEKLKIYMGEDEKKARK 307
           +F  +++LK  +  DE  ARK
Sbjct: 258 RFASLDELKAQIARDELTARK 278


>gi|319938941|ref|ZP_08013305.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           1_2_62CV]
 gi|319811991|gb|EFW08257.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           1_2_62CV]
          Length = 310

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 151/302 (50%), Gaps = 13/302 (4%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS 67
           N+     ++  V+ +G FDG+H GH  +  +A KIA   +  I VL+F   P+       
Sbjct: 8   NEKDIQQIEHTVLVLGYFDGLHKGHQALFAEARKIAAAKDLKIAVLTFPESPKLAFVRYQ 67

Query: 68  PIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           P   L   S +E++  LE +G   L    FT + A  +AEQF  K  +  L+ KTVI G 
Sbjct: 68  PSLMLHLTSPEERLQQLENLGVDYLYLVDFTSQFARNTAEQFFTK-YISRLKAKTVIAGF 126

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            + FG DR     +     EK     V I    N     +SS+ IR  +  G+V  +  L
Sbjct: 127 DYHFGSDRRSAEDL-----EKLFEGQVIIVPSVNFNGVKISSTRIRETVLAGNVAESNQL 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +     D   Y G+A+ 
Sbjct: 182 LGYSLSTSGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVE-HDGQMYRGMASV 240

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G+N T      L  E+ IFDFSQ+IYG    + + D +R  +KF ++++L   +  D++ 
Sbjct: 241 GKNVTF-EGDELRFEANIFDFSQDIYGDTIRIFWLDKIRDMVKFDNVDELVKQLQVDKEI 299

Query: 305 AR 306
           AR
Sbjct: 300 AR 301


>gi|227504835|ref|ZP_03934884.1| FAD synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198526|gb|EEI78574.1| FAD synthetase [Corynebacterium striatum ATCC 6940]
          Length = 341

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 19/315 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
            S+P       V IG FDG+H GH  ++  A+  A    +   +++F+PHP  +      
Sbjct: 11  DSIPGDFGPTAVTIGVFDGVHRGHQQLINNAVSYARAEELRTVMVTFDPHPVAVFLPERA 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG  A++   FT E    + + +++ ++V  L  + V+ G  F 
Sbjct: 71  PLSVVTFERRLQLAEEMGIDAVLVIDFTKELVGTTPQHYVEDLIVGKLHARHVVVGENFT 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    + + G+ +GF +V +  L ++    + S+NIR  L  G +  A   LG 
Sbjct: 131 FGAGASGTADAMVEFGKTHGF-SVDVVPLLDDAGVRICSTNIRANLAAGEIAKANWALGR 189

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPD--ILLKEGVYAIRF-----------RTQD 234
            F++   V+ G  + G+ LGFPTAN Q  PD   +  +GVYA  F               
Sbjct: 190 HFSVTGPVVRGAGRGGKELGFPTAN-QYFPDSVAIPADGVYAGWFILEPAEAPVEGNMDH 248

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +Y+   + G NPT   +    +ESF+ D   ++YG   TV F D+LR  +KF  +E+L
Sbjct: 249 GMAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGHVATVKFVDHLRDMVKFNSVEEL 307

Query: 295 KIYMGEDEKKARKIL 309
              M  D  KAR++L
Sbjct: 308 LDAMAADVAKAREVL 322


>gi|23099057|ref|NP_692523.1| FMN adenylylate transferase [Oceanobacillus iheyensis HTE831]
 gi|22777285|dbj|BAC13558.1| riboflavin kinase : FMN adenylylate transferase (riboflavin
           biosynthesis) [Oceanobacillus iheyensis HTE831]
          Length = 313

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 11/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ-SSSPIFTLSPPSI 77
           V AIG FDGIH GH  ++  A++ A    +   V++F+PHP  +++  +  I  ++    
Sbjct: 21  VSAIGFFDGIHQGHQKVITTAVREAEEKEMDSAVITFHPHPSVVLKKDTQQIQYITTLKE 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGD 136
           ++ +L+++G   L    F  + +  S ++FI   +V  L +K ++ G  + FG K +   
Sbjct: 81  KQDVLQELGVDRLYIITFNEQLSKLSPQEFINHFIV-GLHIKHLVAGFDYSFGYKGKGNM 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             I      K+ +  V    L   K   +SS+ IR  L  G+V     LL   +     V
Sbjct: 140 NNISDYSNGKFTWQKVEQVSLDEEK---ISSTRIRKELKAGNVDKVYQLLNRPYQSAGMV 196

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-G 254
           I G + GR LG+PTAN+ +  D LL ++G+YA+    ++Q  Y G+AN G NPT   +  
Sbjct: 197 IKGAQRGRELGYPTANIDVPNDSLLPRQGIYAVYVWVKNQ-RYEGMANIGTNPTFTEDRQ 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + +E +IFD+S ++YG+   + + +Y+RPE +F  +E L   M EDE++ R  L
Sbjct: 256 DVSVEVYIFDYSNDLYGEELIIEWLNYVRPEERFDTVEALINGMKEDEQEIRSYL 310


>gi|309810439|ref|ZP_07704266.1| riboflavin biosynthesis protein RibF [Dermacoccus sp. Ellin185]
 gi|308435591|gb|EFP59396.1| riboflavin biosynthesis protein RibF [Dermacoccus sp. Ellin185]
          Length = 316

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 15/313 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
             LP      VV +GNFDG+H GH  ++++  + A+   +    ++F PHP  ++     
Sbjct: 8   HDLPADFGPTVVTLGNFDGVHRGHAAVMQRVAQEAHARALKSVAVTFEPHPLAVLAPDKA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    +  +LE++G  A++   FT E A  +  +F++   V+ L    V+ G   R
Sbjct: 68  PEMLTGMKDRLFLLEQLGLDAVVVMPFTRELAAQTPREFVETTFVDALHAGCVVVGKDTR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +GD   L + G ++GF  + +D++        SSS +R  +  G V  AA +LG 
Sbjct: 128 FGVKNSGDIRTLSELGGEFGFDVIALDDVGPGVRW--SSSQVRELIAGGKVDEAAEVLGR 185

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYA----IRFRTQDQTSY--SGV 241
              +  +V+ G + GR LGFPTAN+    + ++  +GVYA     R   QD   Y     
Sbjct: 186 NHCVVGEVVKGFQRGRELGFPTANLARDAEGVVPADGVYAGWLVRRSLAQDDPEYRLPAA 245

Query: 242 ANFGRNPTM-VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + G NPT  +P     +E+++ D +  ++YG+   V F  +LR  +KF  IE L   M 
Sbjct: 246 ISVGTNPTFDIPE--RTVEAYVLDRTDLDLYGEIVAVEFVQHLRGNVKFDSIEALIEQMT 303

Query: 300 EDEKKARKILESS 312
            D + AR +L  +
Sbjct: 304 RDVEAARDLLAPA 316


>gi|69246871|ref|ZP_00604163.1| Riboflavin kinase / FAD synthetase [Enterococcus faecium DO]
 gi|257882935|ref|ZP_05662588.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,502]
 gi|257884349|ref|ZP_05664002.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,501]
 gi|257889286|ref|ZP_05668939.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,410]
 gi|260560103|ref|ZP_05832281.1| riboflavin kinase/FAD synthetase [Enterococcus faecium C68]
 gi|261207409|ref|ZP_05922095.1| riboflavin kinase/FAD synthetase [Enterococcus faecium TC 6]
 gi|289566669|ref|ZP_06447086.1| riboflavin biosynthesis protein RibF [Enterococcus faecium D344SRF]
 gi|293556657|ref|ZP_06675222.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1039]
 gi|293560189|ref|ZP_06676691.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1162]
 gi|294613927|ref|ZP_06693862.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1636]
 gi|294621547|ref|ZP_06700713.1| riboflavin biosynthesis protein RibF [Enterococcus faecium U0317]
 gi|314937515|ref|ZP_07844848.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a04]
 gi|314942175|ref|ZP_07849029.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133C]
 gi|314947486|ref|ZP_07850901.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0082]
 gi|314951473|ref|ZP_07854522.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133A]
 gi|314992562|ref|ZP_07857980.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133B]
 gi|314995503|ref|ZP_07860603.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a01]
 gi|68195052|gb|EAN09515.1| Riboflavin kinase / FAD synthetase [Enterococcus faecium DO]
 gi|257818593|gb|EEV45921.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,502]
 gi|257820187|gb|EEV47335.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,501]
 gi|257825646|gb|EEV52272.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,410]
 gi|260073938|gb|EEW62262.1| riboflavin kinase/FAD synthetase [Enterococcus faecium C68]
 gi|260078300|gb|EEW66005.1| riboflavin kinase/FAD synthetase [Enterococcus faecium TC 6]
 gi|289161528|gb|EFD09411.1| riboflavin biosynthesis protein RibF [Enterococcus faecium D344SRF]
 gi|291593202|gb|EFF24776.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1636]
 gi|291598852|gb|EFF29903.1| riboflavin biosynthesis protein RibF [Enterococcus faecium U0317]
 gi|291601192|gb|EFF31479.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1039]
 gi|291605861|gb|EFF35293.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1162]
 gi|313590337|gb|EFR69182.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a01]
 gi|313592854|gb|EFR71699.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133B]
 gi|313596313|gb|EFR75158.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133A]
 gi|313599098|gb|EFR77943.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133C]
 gi|313643156|gb|EFS07736.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a04]
 gi|313646036|gb|EFS10616.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0082]
          Length = 313

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCTYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + EDE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQ 304


>gi|220903644|ref|YP_002478956.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867943|gb|ACL48278.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 313

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 149/301 (49%), Gaps = 19/301 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+HLGH  ++   + + +   +T  V++F PHPR ++        L+    + 
Sbjct: 18  LTIGNFDGVHLGHQALIRHTLDVCSGEGLTPVVMTFWPHPRQVVMPHLGHMPLTTREERF 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             LE +G   ++   FT E A   A  F++  L E L ++ ++ G  F  G+DR G   +
Sbjct: 78  ARLEALGVRHVLELPFTHELAALDAAGFVRAFL-EPLRLRHLVVGYDFSLGRDRGGHVDV 136

Query: 140 LQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           L++ G   GF       V +D        +VSS+ +R  + +G V  AA LLG       
Sbjct: 137 LRRLGADAGFCVEQLPPVVVD------GTVVSSTTLRKLIDEGDVREAARLLGRFHGFSG 190

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA----IRFRTQDQTSYSGVANFGRNPTM 250
            V+HG+  G  LGFPTAN+      + + GVYA    +      + +   V   G  PT 
Sbjct: 191 QVVHGDGRGAGLGFPTANLARPEVAIPRAGVYATLATLATPAGSEKARPAVTCIGCKPTF 250

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             N  L +E+F+ +   ++YG+   + F + LR E +F  ++ LK+ +  D ++AR+IL 
Sbjct: 251 GEN-ELSVETFLLEGGGDLYGRTLRLDFVERLRGEKRFDSVDALKLQIAADVEQARRILA 309

Query: 311 S 311
           +
Sbjct: 310 A 310


>gi|317504295|ref|ZP_07962283.1| riboflavin biosynthesis protein RibF [Prevotella salivae DSM 15606]
 gi|315664589|gb|EFV04268.1| riboflavin biosynthesis protein RibF [Prevotella salivae DSM 15606]
          Length = 314

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 158/315 (50%), Gaps = 22/315 (6%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTL 72
           N +   V  IG FDG+H GH  +++Q   IA    +  TV++F+ HPR ++QS      L
Sbjct: 11  NAVAPCVATIGFFDGVHRGHKYLIQQVNSIAKACGLASTVITFDRHPRQVLQSDYVPQLL 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   +  +L K G    +   F    A  SA  F+++VL   L VK ++ G   RFG +
Sbjct: 71  NPLDRKLLLLSKTGIDNAVVLPFDASVAQLSAYDFMKEVLRNRLNVKKLVIGYDNRFGHN 130

Query: 133 RAGDRGILQKRGEKYGF----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           R        + G + G     HT F  EL       +SSS IR  L +G V  A   LGY
Sbjct: 131 RTETFEDYVRYGHELGIEVIHHTAF--ELHGVN---ISSSVIRGFLQEGEVEMATLCLGY 185

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTS-YSGVANFG 245
            +T+   V+HG   GR +GFPTANM +  S  ++   GVYA+  + ++Q     G+ N G
Sbjct: 186 PYTLIGKVVHGFAQGRLMGFPTANMDVAESGQLIPATGVYAVNVKLKNQPHLLHGMMNIG 245

Query: 246 RNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           R PT   NG  L LE  IF+F  ++YG+   VSF  ++R E KF    +L     E  ++
Sbjct: 246 RRPTF--NGTALSLEVNIFNFRGDLYGELIEVSFIRHIRKERKFNSAAEL----AEQLQQ 299

Query: 305 ARKILESSYPLSERD 319
            R ++E  +   +RD
Sbjct: 300 DRTMIEEQFN-KDRD 313


>gi|288802063|ref|ZP_06407504.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           D18]
 gi|288335498|gb|EFC73932.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           D18]
          Length = 297

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 9/294 (3%)

Query: 30  IHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +H GH  ++ + I  A  S +   V++F+ HPR ++Q+      LS    +  +L K   
Sbjct: 1   MHRGHQFLISRVIDEAKRSGMASAVITFDRHPRQVLQADYQPELLSTLDEKLLLLSKTHI 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
                  F    A  SA  F+Q+VL + L VK +I G   RFG +R+       + G++ 
Sbjct: 61  DNSFVLHFDTSLAALSAHDFMQEVLCKQLNVKKLIIGYDNRFGHNRSETFEDYVQYGKEM 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           G   +  D    N  + VSSS IR  L  G++  A  LLGY +TIES ++ G + GR +G
Sbjct: 121 GIEVIRADAFLPNDEK-VSSSIIRNDLRTGNIEAANRLLGYPYTIESRIVSGYQNGRKMG 179

Query: 208 FPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS-GVANFGRNPTMVPNGPLL-LESFIF 263
           FPTAN+ ++    +L   GVYA+  R +D   +  G+ N G  PT   NG    +E  +F
Sbjct: 180 FPTANLDVNGCQQLLPASGVYAVMVRLKDSVGWKRGMMNIGHRPTF--NGTTTSIEVNLF 237

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +F+  +YGQ   VSF   +R E KF  +E L   + +D+++  ++ + +Y + E
Sbjct: 238 NFTGNLYGQELLVSFISKIRDEHKFDSLEALAQQLKQDKEQINRLFDETYHIQE 291


>gi|171779509|ref|ZP_02920473.1| hypothetical protein STRINF_01354 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282126|gb|EDT47557.1| hypothetical protein STRINF_01354 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 326

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 155/297 (52%), Gaps = 13/297 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N  +  V+ +G FDG+H GH  + +QA  IAN +   +TVL+FN  PR  +   +P  + 
Sbjct: 29  NRTRDSVLVLGYFDGLHKGHKALFDQARSIANRNQLDLTVLTFNESPRLALARFTPELLL 88

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+ P    +   + G   L    FT   +  S+E+F+ +  ++ L  +T++ G  ++FG
Sbjct: 89  NLTAPEKSYEKFAEYGVDDLYLVDFTSAFSKVSSEEFL-RTYIKALRARTIVVGFDYKFG 147

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            DR  D   L    E +    + + E+++N  +I SSS IR  +  G+V     LLGY F
Sbjct: 148 HDRK-DAAHLS---EIFDGDVIVVPEVQDNGEKI-SSSRIRQEILSGNVSEVNRLLGYEF 202

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +  V+HG+  GRT+GFPTAN+ +   + L  +GVY        +  Y  + + G+N T
Sbjct: 203 STQGIVVHGDARGRTIGFPTANLAVLDRVYLPGDGVYVTDIIVSGK-RYRSMTSIGKNVT 261

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                 L LE+ IFDF  +IYG+   + + D +R  IKF   ++L   +  D+K A+
Sbjct: 262 F-GGQDLRLEANIFDFENDIYGETVEIIWLDKIRGMIKFAGADELVEQLKSDKKFAQ 317


>gi|260060924|ref|YP_003194004.1| riboflavin biosynthesis protein RibF [Robiginitalea biformata
           HTCC2501]
 gi|88785056|gb|EAR16225.1| riboflavin biosynthesis protein RibF [Robiginitalea biformata
           HTCC2501]
          Length = 264

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 138/261 (52%), Gaps = 5/261 (1%)

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           T+L+F PHPR ++Q  S +  L+    +  IL + G   L+ + FT   +  +A QF+++
Sbjct: 4   TLLTFYPHPRMVLQKDSGLKLLNTIEEKTDILRETGLDCLVIHPFTQRFSRLTATQFVRE 63

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           +LVE L  K +I G   RFG++R  +   L+  G  + F    I     ++   VSS+ I
Sbjct: 64  MLVEKLHTKKIIIGYDHRFGRNRTANIQDLEAFGNLFDFSVEEISAQEVDEVS-VSSTKI 122

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAI 228
           R AL  G +  A   LGY + +   V  G+ +GR LGFPTAN+ +  +  L    GVYA+
Sbjct: 123 RKALEAGDLETANAYLGYPYMLSGTVRRGKGLGRNLGFPTANLGIDSEYKLIPANGVYAV 182

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           R +  D+  + G+ N G NPT+  +G   +E   FD  Q++Y Q   V     LR E KF
Sbjct: 183 RSQLGDREVF-GMMNIGSNPTVEDSGQ-HIEVHFFDLDQDLYDQPLRVGLLARLRDERKF 240

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E LK  +  D++ AR+ +
Sbjct: 241 DSLEALKEQLSLDQQAARRAI 261


>gi|154686084|ref|YP_001421245.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           amyloliquefaciens FZB42]
 gi|154351935|gb|ABS74014.1| RibC [Bacillus amyloliquefaciens FZB42]
          Length = 313

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 170/311 (54%), Gaps = 23/311 (7%)

Query: 9   INQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           I+ S P+HL+       V+A+G FDG+HLGH  ++  A +IA    ++  V++F+PHP  
Sbjct: 4   IHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPHPSH 63

Query: 62  II-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           ++ +   P   ++P  +++KI  + ++G   L   KF    A+ S +QF ++ ++  L  
Sbjct: 64  VLGRDKEPKDLITP--LEDKISQIGRLGADVLYVVKFDEAFASLSPKQFAEEYIL-GLNA 120

Query: 119 KTVITGTKFRFGKDRAGDRGIL-QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +  + G  F +GK   G    L      K G  TV   E +  + + +SS+ IR+AL  G
Sbjct: 121 RHAVGGFDFTYGKYGKGTMETLPDDLNGKAGCTTV---EKQTEQDRKISSTYIRSALQDG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L    I+   GVYA++   + + 
Sbjct: 178 DVELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANVGLHNSYIVPPTGVYAVKAEIKGEV 237

Query: 237 SYSGVANFGRNPTMV---PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Y GV N G  PT     P+ P  +E  +F+F Q++YG+   + ++  +R E KF  I++
Sbjct: 238 -YEGVCNIGYKPTFYEKRPDQP-SIEVHLFNFQQDVYGEDVKIEWYKRIRSERKFNGIDE 295

Query: 294 LKIYMGEDEKK 304
           L   +G+D+++
Sbjct: 296 LTAQIGKDKQE 306


>gi|298482244|ref|ZP_07000431.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D22]
 gi|298271531|gb|EFI13105.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D22]
          Length = 326

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 161/303 (53%), Gaps = 13/303 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++        L+ P  +
Sbjct: 16  VATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNVDYRPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G    +   FT E +  +A +F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  ISLLADIGVDYCLMLDFTPEVSRLTAREFMTQLLKERYQVKYLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G++ G   +         E+ N  +  VSSS IR  L +G V  AA  L Y + +
Sbjct: 136 DYVRYGKEIGIEVIRAKAYTSNIEIENVPNVPVSSSLIRKLLHQGEVDLAADCLKYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D+ +Y G+ N G  PT 
Sbjct: 196 DGIVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDKKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+KF  I++L + + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSSIDELIVQLHKDAEETEAIL 313

Query: 310 ESS 312
            +S
Sbjct: 314 LAS 316


>gi|320105943|ref|YP_004181533.1| riboflavin biosynthesis protein RibF [Terriglobus saanensis SP1PR4]
 gi|319924464|gb|ADV81539.1| riboflavin biosynthesis protein RibF [Terriglobus saanensis SP1PR4]
          Length = 331

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 15/316 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           ++LP+ L   +V IGNFDG+H GH  +++  I  A   ++    ++ +PHP  +++    
Sbjct: 10  ENLPSDLGNTIVTIGNFDGVHCGHRWVIDHVINCARKLSARAIAVTLDPHPAKLLRPDRG 69

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  ++P   + ++L + G  A++   F  E AN SA  F   VL   L  + V  G  FR
Sbjct: 70  LRLITPGDRKLELLAETGLDAVLVLPFNTELANTSARDFATNVLHRALHAQEVHEGENFR 129

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG D       L   G++ GF +V     ++ + Q +SSS IRT +  G++  A  LLG 
Sbjct: 130 FGHDAEAGTDGLAALGKELGF-SVHAYAPQSMRGQAISSSRIRTLIAAGNLPQARALLGR 188

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---SYSGVANFG 245
            F+I+S    G   G     PT N+    ++L   GVY  + +  + T   S+ GV N G
Sbjct: 189 EFSIDSTPASGRGYGTQYAVPTINLAPYAELLPANGVYITKLQIGEGTEAESFDGVTNIG 248

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCT--VSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             PT   +    +E+ +F+F      +     ++F   LR EI+F   E LK  +G D  
Sbjct: 249 NRPTFGADS-FAVETHLFNFHPVALTETTPLRLTFKLRLRNEIRFPSPEALKAQIGRDIA 307

Query: 304 KA------RKILESSY 313
           KA      RK L+SS+
Sbjct: 308 KAQRYLHLRKTLKSSF 323


>gi|300812603|ref|ZP_07093020.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300496476|gb|EFK31581.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 313

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 13/294 (4%)

Query: 9   INQSLP--NHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTI 62
           IN S P    L  G  V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ HP+ +
Sbjct: 4   INLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRHPKEV 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    L+ P  +   + K+G   L+  KFT   ++ + + F+ ++++  L+  TV+
Sbjct: 64  YAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPGFSHLAPQAFVDEIIMG-LKADTVV 122

Query: 123 TGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G  + +G KD A    +      ++    V        K   + S+ IR A+  G++  
Sbjct: 123 AGFDYSYGPKDVANMENLPAFAKGRFDIKVVPKQIFAGKK---IGSTEIRQAVKSGNLRL 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D + +  
Sbjct: 180 ATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-SWHQS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L
Sbjct: 239 MTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAAL 292


>gi|299534736|ref|ZP_07048066.1| riboflavin biosynthesis protein ribC [Lysinibacillus fusiformis
           ZC1]
 gi|298729824|gb|EFI70369.1| riboflavin biosynthesis protein ribC [Lysinibacillus fusiformis
           ZC1]
          Length = 315

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 154/291 (52%), Gaps = 12/291 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSIQ 78
           +A+G FDG+H GH  +++ A +  N    P  V++F+PHP  ++   +  +F ++    +
Sbjct: 23  LALGFFDGVHRGHQAVIKAAKEEGNKRQIPTAVMTFDPHPSLVLGGRNEKVFYITLLQQK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++ E+ G   +    FT + A  S   FI    +  L ++ V  G  + FG   A  +G
Sbjct: 83  LQLFEEQGVDTVFVVHFTSDFAKLSPAAFID-TFIRGLNIQHVTAGFDYSFG---AFGKG 138

Query: 139 ILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            ++  R    G + V I E + +  + +SS+ IR  L +G +  A  LLG  F I   V+
Sbjct: 139 TMEDMRLLSNGDYGVTIVEKKTDDVEKISSTRIRKLLQEGDMEEATVLLGRPFEINGIVV 198

Query: 198 HGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGP 255
           HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+   Y GV N G  PT   PN  
Sbjct: 199 HGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN-NWYDGVCNVGYKPTFKDPNDK 257

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E  I +F + IYG+   V+++  +R E KF  IE LK  + +D+++A
Sbjct: 258 QLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGIEALKTQIEKDKQEA 308


>gi|227551748|ref|ZP_03981797.1| FAD synthetase [Enterococcus faecium TX1330]
 gi|257895656|ref|ZP_05675309.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com12]
 gi|293377734|ref|ZP_06623923.1| riboflavin biosynthesis protein RibF [Enterococcus faecium PC4.1]
 gi|227179053|gb|EEI60025.1| FAD synthetase [Enterococcus faecium TX1330]
 gi|257832221|gb|EEV58642.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com12]
 gi|292643734|gb|EFF61855.1| riboflavin biosynthesis protein RibF [Enterococcus faecium PC4.1]
          Length = 313

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   AN + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMADLGIDYLYEVDFTSSFANLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCIYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + +DE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELIEQLKDDEQ 304


>gi|193214947|ref|YP_001996146.1| riboflavin biosynthesis protein RibF [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088424|gb|ACF13699.1| riboflavin biosynthesis protein RibF [Chloroherpeton thalassium
           ATCC 35110]
          Length = 326

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 161/310 (51%), Gaps = 12/310 (3%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRT 61
           F++ E N  +        V IG++DG+HLGH  IL + +K A    +   +++F PHPR 
Sbjct: 11  FYDWETNTQVNFDAVRSAVTIGSYDGVHLGHRAILARLVKSAKKQGLRSVLITFEPHPRL 70

Query: 62  IIQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +++           + +EK  +L  +G   ++  +F    +   A+ F++ +LV+ + + 
Sbjct: 71  VLRREKKRQLKLITTFEEKKSLLAPLGLDVVLVLEFDKAFSEIPAQTFVKDILVKRVGLA 130

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV--FIDELRNNKSQIVSSSNIRTALTKG 177
            ++ G    FGKDR G    L    + YGF TV    ++L + K   VSS+ IR  L  G
Sbjct: 131 DIVIGYDHNFGKDRQGTIETLNSLSQLYGF-TVEETAEQLVHGKH--VSSTIIRGLLEAG 187

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            +    HLLG  F +   V+ G K+GRT+GFPT N++L+    ++ K GVY +   + + 
Sbjct: 188 EIDEVNHLLGRPFRLTGKVVEGFKVGRTIGFPTVNLELTNPYKLIPKSGVY-VGDVSING 246

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + N G  PT+     L +E+ I +F +++YGQ  + +    +R EIKF +++ LK
Sbjct: 247 VCYRSMMNIGFKPTVTNEHKLSIEAHILNFDKDLYGQTLSFALIYRIRDEIKFVNLQALK 306

Query: 296 IYMGEDEKKA 305
             +  D++ A
Sbjct: 307 TQLESDKRVA 316


>gi|94985909|ref|YP_605273.1| riboflavin biosynthesis protein RibF [Deinococcus geothermalis DSM
           11300]
 gi|94556190|gb|ABF46104.1| riboflavin biosynthesis protein RibF [Deinococcus geothermalis DSM
           11300]
          Length = 303

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 19/296 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVAIG+FDG+HLGH  +L Q  A    +  P  V +F+P  R + Q    + TL P  ++
Sbjct: 16  VVAIGSFDGVHLGHQALLAQLKAKGREHKVPTVVYTFDPPTRVLTQGVEFLSTL-PEKLE 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G    +   FT E A    E F+  +    L  ++++ G  F FGK RAG   
Sbjct: 75  --LLARYGIDETVAVPFTPEFAARPKEAFLDDLRA--LHPRSIVVGEDFHFGKGRAGGVA 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++   +     V    +     + + S+ IR  L  G V  AA LLG  ++ +  V+ 
Sbjct: 131 DLREVTRE-----VVALPMHQLGGEDIKSTRIRAYLAAGDVEGAARLLGRHYSAQGVVVS 185

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ----DQTSYSGVANFGRNPTMVPNG 254
           G+++GRT+G+PTAN+++     L  GV+A+   T+    +   + G+AN G  PT+  NG
Sbjct: 186 GDRLGRTIGWPTANLRVPEGKALPLGVFAVVALTERGPHNVQRWHGMANVGWRPTV--NG 243

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                E  +FDF  ++YG+   + FF  LR E KF  +++L+  +  D + AR +L
Sbjct: 244 TERRFEVHLFDFGGDLYGEELDIKFFARLRGEQKFSGLDELRAQLARDAEAARAVL 299


>gi|293570604|ref|ZP_06681655.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E980]
 gi|291609275|gb|EFF38546.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E980]
          Length = 313

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   AN + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMADLGIDYLYEVDFTSSFANLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VTHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCIYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + +DE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELIEQLKDDEQ 304


>gi|160883656|ref|ZP_02064659.1| hypothetical protein BACOVA_01628 [Bacteroides ovatus ATCC 8483]
 gi|156111069|gb|EDO12814.1| hypothetical protein BACOVA_01628 [Bacteroides ovatus ATCC 8483]
          Length = 315

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 160/301 (53%), Gaps = 13/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++        L+ P  +
Sbjct: 16  VATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNVEYRPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G    +   FT E +  +A +F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  ISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQVKYLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G++ G   +         E+ N  +  VSSS IR  L +G V  AAH L Y + +
Sbjct: 136 DYVRYGKEIGIEVIRAKAYTSNIEIGNEPNIPVSSSLIRKLLHEGEVSLAAHCLKYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+++  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+KF  I++L   + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSSIDELITQLHKDAEETETIL 313

Query: 310 E 310
           +
Sbjct: 314 K 314


>gi|237722878|ref|ZP_04553359.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293373422|ref|ZP_06619777.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CMC 3f]
 gi|299147553|ref|ZP_07040617.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_23]
 gi|229447400|gb|EEO53191.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631560|gb|EFF50183.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CMC 3f]
 gi|298514340|gb|EFI38225.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_23]
          Length = 315

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 160/301 (53%), Gaps = 13/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++        L+ P  +
Sbjct: 16  VATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNVEYHPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G    +   FT E +  +A +F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  ISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQVKYLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G++ G   +         E+ N  +  VSSS IR  L +G V  AAH L Y + +
Sbjct: 136 DYVRYGKEIGIEVIRAKAYTSNIEIGNEPNIPVSSSLIRKLLHEGEVSLAAHCLKYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+++  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+KF  I++L   + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSSIDELITQLHKDAEETETIL 313

Query: 310 E 310
           +
Sbjct: 314 K 314


>gi|227114257|ref|ZP_03827913.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 281

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 1/271 (0%)

Query: 45  ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
           A   P+ V+ F P P  +  +      L+    + K L + G   L+  +F    A   A
Sbjct: 12  ARGLPVMVMIFEPQPLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDA 71

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           E F+  +LV+ L VK ++ G  FRFG  R GD  +LQK G + GF  +  D   N+  + 
Sbjct: 72  ETFVSSLLVKKLGVKFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVISTDSFCNDGKR- 130

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           VSS+ +R AL++  +  A  LLG+ ++I   V HG+ +GRT+GFPTAN+ L   +    G
Sbjct: 131 VSSTAVREALSRDELELAESLLGHPYSISGRVEHGKALGRTIGFPTANLPLKRQVSPVSG 190

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
           VYA+      Q    GVAN G  PT+  +    LE  + D +  +YG+   V     +R 
Sbjct: 191 VYAVSVYGLGQEPLPGVANIGTRPTVNGDKRQQLEVHLLDVTMNLYGRHIEVVLRKKIRN 250

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E +F  ++ LK  + +D   AR       P+
Sbjct: 251 EQRFASLDALKQQIADDVVTARTFFGLKTPV 281


>gi|332531434|ref|ZP_08407338.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hylemonella
           gracilis ATCC 19624]
 gi|332039103|gb|EGI75525.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hylemonella
           gracilis ATCC 19624]
          Length = 372

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 40/328 (12%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G  V IGNFDG+H GH  +L      A    +   VL+F PHPR    + +    L+P  
Sbjct: 27  GTAVTIGNFDGVHRGHQAMLALLRSEAEQRGMRSCVLTFEPHPRDYFAAQARKPELAPAR 86

Query: 77  I---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           I   ++K+  L + G   ++   F    +  S + FI  VL+  L  + ++ G  FRFG 
Sbjct: 87  ISTLRDKLADLRRAGIDQVVVLPFDSRLSTLSPQAFIDDVLLRGLNTRYLLVGDDFRFGA 146

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELR--------NNKSQIVSSSNIRTALTKGHVLNAA 183
            RAGD  +L   G+  GF    ++              SQ VSSS +R AL +G + +AA
Sbjct: 147 RRAGDYALLDAAGQAQGFDVARMNSYEVHVPGPTPGGASQRVSSSLVRAALAEGRMDDAA 206

Query: 184 HLLGYRFTIESDVIHGEKIGRTL-------------GFPTANMQLSPDILLKEGVYAIR- 229
            LLG  + I   V+HG K+GR L             GF T N++ +       G++A++ 
Sbjct: 207 KLLGRPYHISGHVLHGRKLGRELGKNLGPNAPGGGQGFRTLNLRFAHWKPAASGIFAVQV 266

Query: 230 --FRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSF 278
               +  +    GVAN G  P++ P+    G +LLE+ +FD+  E+     YG+   V  
Sbjct: 267 HGLTSSAEAPLRGVANLGVRPSLDPSDVNGGRVLLETHVFDWPAELGLEGGYGKIIRVEL 326

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              L  E+K+  ++ L+  + +D + AR
Sbjct: 327 LHKLHDELKYDSLDALQAGIAQDCEHAR 354


>gi|323171443|gb|EFZ57090.1| riboflavin biosynthesis protein RibF [Escherichia coli LT-68]
 gi|332762254|gb|EGJ92521.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2747-71]
 gi|332764866|gb|EGJ95094.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-671]
          Length = 273

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 4/258 (1%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  
Sbjct: 61  LRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFL 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQK G +YGF             +I SS+ +R AL   ++  A  LLG+ F I   V+H
Sbjct: 121 LLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLLGHPFAISGRVVH 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT V      L
Sbjct: 180 GDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAGIRQQL 238

Query: 259 ESFIFDFSQEIYGQRCTV 276
           E  + D + ++YG+   V
Sbjct: 239 EVHLLDVAMDLYGRHIQV 256


>gi|320334244|ref|YP_004170955.1| riboflavin biosynthesis protein RibF [Deinococcus maricopensis DSM
           21211]
 gi|319755533|gb|ADV67290.1| riboflavin biosynthesis protein RibF [Deinococcus maricopensis DSM
           21211]
          Length = 298

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 16/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L +  + A +   P  V +F+P  R ++Q    + TL P  + 
Sbjct: 16  VVAVGSFDGVHLGHQALLARLKERARHYRVPSVVYTFDPPTRVLMQGVEFLSTL-PEKLD 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G   +I   FT E A    + F+  +    L  + ++ G  F FG+ RAG   
Sbjct: 75  --LLARFGVDEVIAVPFTREFAARPKDAFLDDL--RTLRPRALVVGEDFHFGRGRAGGVA 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++         V    +     + + S+ IR  L +G V +A   LG  +     V+ 
Sbjct: 131 DLREVTAD-----VVPLPMHGLNGEDIKSTRIRAHLQQGDVTSANRFLGRHYDAAGVVVR 185

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-LL 257
           G+++GRT+GFPTAN+++     L  GV+A+   T D   Y G+AN G  PT+  NG    
Sbjct: 186 GDQLGRTIGFPTANIRVPEGKALPLGVFAVSV-TTDHGRYGGMANIGMRPTV--NGTERR 242

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            E  + DF  ++YGQ   V F+ +LR E +F  ++ LK  + ED+ +AR  L  
Sbjct: 243 FEVNVLDFEGDLYGQEIVVKFYQHLRAEQRFSGLDALKAQLHEDQAQARAALRG 296


>gi|170733872|ref|YP_001765819.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia MC0-3]
 gi|169817114|gb|ACA91697.1| riboflavin biosynthesis protein RibF [Burkholderia cenocepacia
           MC0-3]
          Length = 330

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R +L  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVSGSDGTRISSSGVRASLAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           +  D   AR         +ERDR
Sbjct: 296 IALDVANARAY------FTERDR 312


>gi|302425311|gb|ADL39577.1| putative riboflavin biosynthesis protein RibF [Hyphomicrobium
           sulfonivorans]
          Length = 313

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 18/301 (5%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           HL GG V + +FDG H GH  ++  A  +  A+ SP+  L F+         ++     +
Sbjct: 26  HLLGGHVVVSSFDGFHRGHQALMHHAKQVSAADGSPVVALLFD---------AASDDART 76

Query: 74  PPSIQEKILEKM---GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           P +  E++  ++   G + ++   F    A++   Q + ++L E+   K++  G  FRFG
Sbjct: 77  PLAQGEEVARRLRLQGGANVVALGFA-SNASWLECQALCELLREFAP-KSITVGANFRFG 134

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              +    +L      +   T  ++ +   +   ++++NIR  L  G +  A  LLG  +
Sbjct: 135 PKSSIGSQVLASMARSFAISTTVMETVACEECGPITAANIRQHLAAGDIQAANRLLGRNW 194

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           TIE  V+HG K GR LGFPTAN+Q    + L   +YA+R    ++    GVA +G  P  
Sbjct: 195 TIEGPVVHGYKRGRELGFPTANVQPLHRLDLAHAIYAVRVYAGERV-LDGVACYGTRPQF 253

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               P  LE  I DF+ ++YGQR  V F  + RPE+KF  ++ L   M  D  +AR++L 
Sbjct: 254 DDGAP-ALEVHILDFAGDLYGQRLRVEFVAHQRPELKFSCVDDLVRQMEIDRAEARELLA 312

Query: 311 S 311
           +
Sbjct: 313 A 313


>gi|258539780|ref|YP_003174279.1| riboflavin biosynthesis protein ribF [Lactobacillus rhamnosus Lc
           705]
 gi|257151456|emb|CAR90428.1| Riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus Lc
           705]
          Length = 315

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 13/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+ +G FDG+H GH  +++    + +A   P+ V++F+ HP  + +  + + I  LS   
Sbjct: 21  VLTLGFFDGVHRGHQAVIQAGKRVALAKKLPLAVMTFDMHPAIVYRGVAKTAIRYLSTRE 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  ++++ G   L    FT   A  S + F+   LV  L+   V+ G  + + K    +
Sbjct: 81  EKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLVG-LKAAAVVAGFDYTYSKRAVAN 139

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             +L +  RG    F  V + +L  +  +I SS+ IR AL +G +  A  LLGY +    
Sbjct: 140 MALLPEYARGR---FEVVSVPKLAEDGKKI-SSTRIRDALDRGDIDTANELLGYVYLTTG 195

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HGE  GR LGFPT N+  L    L   G+YA+  +  D T Y G+A+ GRN T   +
Sbjct: 196 KVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKVDD-TWYLGMASIGRNVTFGDD 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   +  DE+  R+
Sbjct: 255 RAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALIAQLKTDEQTVRQ 308


>gi|332300597|ref|YP_004442518.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332177660|gb|AEE13350.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 311

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 14/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G FDG+HLGH  ++ Q + IA    +T  V++F PHP+ ++    P   ++    +
Sbjct: 5   VVAMGAFDGVHLGHQALIRQVLTIAKQDHLTSGVVTFEPHPQLVLHPERPFRLITLEREK 64

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E +L +MG   +    FT+  +  SAE+F++  L E L++ T++ G    FG D+     
Sbjct: 65  ELLLHQMGIERVAVIPFTVALSQMSAEEFLRTYLDEQLQIHTLVVGFDHHFGHDKGLAFE 124

Query: 139 ILQKRGEKYGFHTVFIDE--LRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             Q    +YG   +  +   L ++ SQ  +SS+ IR  +  G V  A   LG+ +TI   
Sbjct: 125 DYQAIAHRYGIRCIRGEAYTLEDSTSQDPISSTAIRRWIDTGAVTEAERQLGHPYTILGK 184

Query: 196 VIHGEKIGRTLGFPTANMQL-SP-DILLKEGVYAIR-----FRTQDQTSYSGVANFGRNP 248
           V  G +IGR LG+PTAN+++ SP   L   GVY  R     F    Q     +   G  P
Sbjct: 185 VKTGLQIGRKLGYPTANIEVPSPHKALPPAGVYMARTTIDPFGASQQRDIPSMLYIGTRP 244

Query: 249 TM-VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T+ +     ++E F+    + ++YGQ   +S  D LR E+ F+ ++ L+  +  DE+  R
Sbjct: 245 TLELAEEETMIEVFLMGGEEYQLYGQELQISLCDRLRQELHFESLDALRKQITRDEEAVR 304

Query: 307 K 307
           +
Sbjct: 305 R 305


>gi|134296684|ref|YP_001120419.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia vietnamiensis G4]
 gi|134139841|gb|ABO55584.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia
           vietnamiensis G4]
          Length = 330

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE +GF    +D +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMDTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   
Sbjct: 236 LPGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKYDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IALDVANAR 304


>gi|154509091|ref|ZP_02044733.1| hypothetical protein ACTODO_01608 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192219|ref|ZP_06609388.1| riboflavin biosynthesis protein RibF [Actinomyces odontolyticus
           F0309]
 gi|153798725|gb|EDN81145.1| hypothetical protein ACTODO_01608 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820335|gb|EFF79328.1| riboflavin biosynthesis protein RibF [Actinomyces odontolyticus
           F0309]
          Length = 329

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 163/321 (50%), Gaps = 20/321 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M+V++++     +P + +  VV IGNFDG+H GH  ++   I+ A+   +    ++F+PH
Sbjct: 1   MNVWYSL---SDIPGN-EASVVTIGNFDGMHNGHKKVISTCIERAHKLGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +    +  +SP   +   +   G  A +   +     +  A++F+ + LVE    
Sbjct: 57  PIQVHKPEVGLQLISPLRDRLDAMAAAGLDATLVAHYDASVYSLEADEFVYEYLVERCGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG+  AG    L++ G +YGF+ + + ++   + +  SSS +R  L  G 
Sbjct: 117 REVVVGEDFRFGRGNAGTIDTLRELGRRYGFNVITVTDIEAPEGRRWSSSWVRELLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYA---IRF-- 230
           V  AA +LG+   I   V HG K GRTLGFPTAN  LS D   ++  +GVYA   +R   
Sbjct: 177 VSGAARVLGHLHRIRGTVCHGFKRGRTLGFPTAN--LSEDVEGVIPADGVYAGWVVRAVP 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKF 288
            TQ         + G NP    NG    +E+ +   S   +YG+R  V+F   +RP + F
Sbjct: 235 GTQSAEFLPAAISVGTNPQF--NGVERTVEAHVLGRSDLNLYGERIAVTFVSRIRPMLSF 292

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +++L   M +D ++   +L
Sbjct: 293 DSLDELLTQMDDDLRQTASVL 313


>gi|296171643|ref|ZP_06852857.1| riboflavin biosynthesis protein RibF [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894004|gb|EFG73767.1| riboflavin biosynthesis protein RibF [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 325

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 161/317 (50%), Gaps = 21/317 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PHP  ++   S   
Sbjct: 10  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPHPMEVVYPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +++E+MG    +   FT +    + E+++ ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLTRRAELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVEHLHVVEVVVGENFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G V+ A   LG
Sbjct: 130 KKAAGNVETLRRAGERFGFAVESMSLLSEHHSNETVTFSSTYIRSCVDAGDVVAAMEALG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ--------- 235
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 190 RPHRVEGVVVRGEGRGMELGFPTAN--VAPPMYSAIPADGVYAAWFTLLGHGPVTGTVVP 247

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + +F  ++ L
Sbjct: 248 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQYVALDFVARIRGQTRFDSVQDL 306

Query: 295 KIYMGEDEKKARKILES 311
              MGED ++AR +L +
Sbjct: 307 IDAMGEDTERARAMLSA 323


>gi|260175192|ref|ZP_05761604.1| riboflavin biosynthesis protein ribF, putative riboflavin kinase
           [Bacteroides sp. D2]
 gi|315923424|ref|ZP_07919664.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697299|gb|EFS34134.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 315

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 161/301 (53%), Gaps = 13/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++ +      L+ P  +
Sbjct: 16  VATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNAEYRPELLTTPEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G    +   FT E +  +A +F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  ISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQVKYLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              + G++ G   +         ++ N  +  VSSS IR  L +G V  AAH L Y + +
Sbjct: 136 DYVRYGKEIGIEVIRAKAYTSNIKIGNEPNIPVSSSLIRKLLHEGEVSLAAHCLKYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+++  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAV-WVTFDGETYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F  +IY +   ++F    RPE+KF  I++L   + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSSIDELITQLHKDAEETETIL 313

Query: 310 E 310
           +
Sbjct: 314 K 314


>gi|1167773|emb|CAA64624.1| regulatory protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 316

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 19/305 (6%)

Query: 14  PNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII-QS 65
           P+HL        V+A+G FDG+HLGH  ++  A +IA    +T  V++F+PHP  ++ + 
Sbjct: 9   PHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPHPSHVLGRD 68

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             P   ++P  +++KI  +E++G   L   KF    A+ S +QFI + ++  L V+  + 
Sbjct: 69  KEPKDLITP--LEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLNVQHAVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +GK   G    +    +     T+   E    + + +SSS IRTAL  G V  A 
Sbjct: 126 GFDFTYGKYGKGTMKTMPDDLDGKAGCTMV--EKLTEQDKKISSSYIRTALQNGDVELAN 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + I+  VIH +K GRT+GFPTAN+ L+   I+   GVYA++     +  Y+GV 
Sbjct: 184 VLLGQPYFIKGIVIHNDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEV-YNGVC 242

Query: 243 NFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           N G  PT     P    +E  +FDF+QE+YG    + ++  +R E KF  I++L   + +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLFDFNQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEK 302

Query: 301 DEKKA 305
           D+++A
Sbjct: 303 DKQEA 307


>gi|206561061|ref|YP_002231826.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia J2315]
 gi|198037103|emb|CAR53024.1| putative riboflavin biosynthesis protein [Burkholderia cenocepacia
           J2315]
          Length = 330

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 157/323 (48%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE++GF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQHGFEVEQMGTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           +  D   AR          ERDR
Sbjct: 296 IALDVANARAY------FIERDR 312


>gi|146297071|ref|YP_001180842.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410647|gb|ABP67651.1| FMN adenylyltransferase / riboflavin kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 305

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 5/281 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG H+GH  + E     AN     V +F  HP  ++   +     +   ++   
Sbjct: 16  VALGFFDGFHMGHKKLFEVLTSSANQCKKVVFTFKNHPDKLLGVDTKYILTNNERLE--F 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            EK     +   +F  E      ++FI+ +L+  L V  V+ G  F FG    G+   L 
Sbjct: 74  FEKYEIDDVYFIEFNNEFMQIDKDKFIEDILIRKLNVSLVVVGYDFTFGYKAEGNSEYLC 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           ++ + +G   V I+ ++  + Q+VSS+ IR  +  G++  A  +LGY F I+  V  G +
Sbjct: 134 EKLKNFGRRCVIIEPVKY-QGQVVSSTLIRNLIMDGNIKLANLMLGYNFFIKGIVKKGNR 192

Query: 202 IGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +GR +GFPT N++   + ++ K GVY       D   Y  + N G NPT+     + +E+
Sbjct: 193 LGRKMGFPTLNIEFDKNKVVPKNGVYVTN-TIIDNKRYLSLTNVGFNPTVSKTQNIKVET 251

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + DF +E YG+  TV F D++R E KF ++++LK  + +D
Sbjct: 252 HVLDFEKEAYGKEITVEFVDFIRDEKKFVNLQELKSQINKD 292


>gi|121609068|ref|YP_996875.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Verminephrobacter eiseniae EF01-2]
 gi|121553708|gb|ABM57857.1| FMN adenylyltransferase / riboflavin kinase [Verminephrobacter
           eiseniae EF01-2]
          Length = 349

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 150/321 (46%), Gaps = 34/321 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP--- 75
            + IGNFDG+H GH  +L      A +  +   VL+F PHPR           L+P    
Sbjct: 17  ALTIGNFDGVHRGHQAMLALLNNEAAHRGVDSCVLTFEPHPRDYFAGVRHKPELAPARIG 76

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           ++++K+  LE+ G    +   F    A  S E FI++VLV  L V+ V+ G  FRFG+ R
Sbjct: 77  ALRDKLTELERCGVQQTVVLPFDAALAAQSPEDFIEEVLVRGLGVRYVLVGDDFRFGRQR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G+  GF     D  R N  ++    VSSS +R AL +G +  AA LLG  
Sbjct: 137 AGDYAMLDAAGQARGF-----DVARMNSYEVHGLRVSSSAVRQALAQGDMPAAARLLGRP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++ S       G++A+           G
Sbjct: 192 YAISGHVVHGRKLGRELGAARAGAGNGFRTLNLRFSHWKPAASGIFAVLVHGLGGAPLPG 251

Query: 241 VANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ P     G +LLE+    +  ++     YG+   V     L  E+K+  +
Sbjct: 252 VANLGVRPSLDPQDVNGGRVLLETHCLQWPADLGLEGAYGKIVRVELLHKLHDELKYDGL 311

Query: 292 EKLKIYMGEDEKKARKILESS 312
           + L   + +D   AR    + 
Sbjct: 312 DALTAGIAKDCADARAWFAAG 332


>gi|256832254|ref|YP_003160981.1| riboflavin biosynthesis protein RibF [Jonesia denitrificans DSM
           20603]
 gi|256685785|gb|ACV08678.1| riboflavin biosynthesis protein RibF [Jonesia denitrificans DSM
           20603]
          Length = 315

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 166/320 (51%), Gaps = 17/320 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+V+ ++E  ++L  H    VV IGNFDG+H GHH++++  I  A    +    ++F+PH
Sbjct: 1   MNVWWSLE--EALA-HRAPSVVTIGNFDGVHRGHHMVIDAVIAEARRRQACAVAMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L+  + + ++L ++G  A+   +++LE A  S   F++  +V+ L  
Sbjct: 58  PAHVHRPEQAAPLLTGLTDRLELLAQLGLDAVCVVEYSLEFAQQSPRDFVKTWIVDALAA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
             V+ G   RFG+D +GD   L+  G+++GF  V +D+  +    +  SSS +R  +  G
Sbjct: 118 TAVVIGRDVRFGRDNSGDLSTLRDLGQEFGFDVVVVDDHGSPGGGERWSSSIVRQLVRGG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFR-TQ 233
            +     LLG    +   V+HG+  GR LGFPTAN  LSPD   ++  +GVYA       
Sbjct: 178 EMGAVTQLLGRPHRMRGVVVHGDARGRELGFPTAN--LSPDSDGMVPADGVYAGYVSVVG 235

Query: 234 DQTSYSGVA---NFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
            Q +  G+    + G NPT        +E+++   +  ++Y +   V F + LRP + F 
Sbjct: 236 GQRALQGLPAAISVGTNPTF-DGQERRVEAYVIGHNNLDLYDKNIMVEFVERLRPTVTFS 294

Query: 290 DIEKLKIYMGEDEKKARKIL 309
            ++ L   M +D  +A+ +L
Sbjct: 295 SLDALIDQMHDDVTRAKLLL 314


>gi|225851489|ref|YP_002731723.1| riboflavin biosynthesis protein RibF [Persephonella marina EX-H1]
 gi|225644971|gb|ACO03157.1| riboflavin biosynthesis protein RibF [Persephonella marina EX-H1]
          Length = 306

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 161/303 (53%), Gaps = 7/303 (2%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSS 67
           ++ LP + K  V  IG+FDG H GH  IL    K A    +   V++F+PHP+  +    
Sbjct: 6   DRDLPLNEKT-VCTIGSFDGFHKGHVEILNLVKKRAKEKNLRSLVITFDPHPKKFLNPDK 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               ++  + +  +L +     +   KF       +A+QF+ + LVE L  + +I G  +
Sbjct: 65  APCLITDINTKIDLLSRKSIDFVYVIKFDQNFLKKTADQFL-RFLVEKLGCRHIIVGYDW 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG  + GD    +++ E+ GF    +D ++ +  +I SS+ IR+ L +G +  A+  LG
Sbjct: 124 RFGYMKEGDIEYAKRKSEELGFTIEVVDPIKEDGERI-SSTLIRSLLREGKIKEASKYLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             + I+  ++ G+  G+ LGFPT N+   PD+ LK+GVYA  + + +   +  V NFG  
Sbjct: 183 RDYCIKGRIVKGDGKGKDLGFPTINIIPPPDLCLKKGVYA-GYVSFNCDQHPAVINFGYR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT V    L +E+ + D +     +   + F +Y+RPE KF+D ++L   + ED + A+K
Sbjct: 242 PT-VDGKKLFIEAHVIDKNINPESEYVRIFFKEYIRPEKKFEDTKQLSDQIKEDIEAAKK 300

Query: 308 ILE 310
           I+E
Sbjct: 301 IVE 303


>gi|269797851|ref|YP_003311751.1| riboflavin biosynthesis protein RibF [Veillonella parvula DSM 2008]
 gi|269094480|gb|ACZ24471.1| riboflavin biosynthesis protein RibF [Veillonella parvula DSM 2008]
          Length = 310

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDGIH GH  ++ +A++ A   N    +++F  HP TI+        +    I 
Sbjct: 18  VYALGTFDGIHRGHQRVIRKAVEEATSINGVSIIITFEHHPLTILHPERVPKRVIQEEIM 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +LE++    ++R   T      +A++F+   L   + V+ ++ G  F FG    G+  
Sbjct: 78  DTVLEELKVDYILRLPMTEALLKMTADEFLHD-LCNDMNVEAIVIGENFTFGAKGLGNPE 136

Query: 139 ILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            ++K         V +  L   + +S  +SS+ IR A+ +G + +A H LG  F  +  V
Sbjct: 137 YMKKVVADKNIR-VLVQPLLPCDGRSTPISSTEIRKAIHEGRLEDANHWLGRPFQFKGTV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G++ GRTLGFPT N+ L  ++    +GVYA R        Y GV N G NPT   N  
Sbjct: 196 IKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRV-CIGGIWYDGVGNIGDNPTF-RNQY 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              E  +F+F Q+IYG+   V F  Y+R E+KF +++ L   M  DE++A  IL ++
Sbjct: 254 HRCEVHVFNFDQDIYGKEVIVQFISYIRGEVKFNNLQDLIDQMKVDEEQALAILANA 310


>gi|257894723|ref|ZP_05674376.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,408]
 gi|294618713|ref|ZP_06698245.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1679]
 gi|257831102|gb|EEV57709.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,408]
 gi|291595026|gb|EFF26371.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1679]
          Length = 313

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 154/289 (53%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCTYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + +DE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKKDEQ 304


>gi|326318116|ref|YP_004235788.1| riboflavin biosynthesis protein RibF [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374952|gb|ADX47221.1| riboflavin biosynthesis protein RibF [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 349

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 152/338 (44%), Gaps = 42/338 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            V IGNFDG+H GH  +L      A +  +   VL+F PHPR    S+     L+P  I 
Sbjct: 17  AVTIGNFDGVHRGHQAMLALLASEAAHRGVESCVLTFEPHPRDYFASALQRPELAPARIG 76

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L + G    +   F    A    + FI  VLV  L  + V+ G  FRFG  R
Sbjct: 77  TLRDKLEELARCGVQQAVVLPFNERLARQPPQAFIDDVLVRGLGARYVLVGDDFRFGAQR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G + GF     D  R N  ++    VSSS +R AL +G +  AA LLG  
Sbjct: 137 AGDYAMLDAAGRERGF-----DVARMNSYEVHGLRVSSSAVRDALARGDMEAAAALLGRP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++ +       G++A+      +    G
Sbjct: 192 YAISGHVVHGRKLGRALGASAEGAGDGFRTLNLRFAHWKPAAGGIFAVLVHGLSEAPLPG 251

Query: 241 VANFGRNPTMVP----NGPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ P     G +LLE+    +     ++  YG+   V     L  E+K+  +
Sbjct: 252 VANLGVRPSLDPADVNGGRVLLETHCLQWPAHLGAEGAYGKIVRVELLHKLHDELKYDSL 311

Query: 292 EKLKIYMGEDEKKARKILESSYPLS--------ERDRI 321
           + L   +  D + AR    S+   S         RDRI
Sbjct: 312 DALTAGIARDCEDARAYFASTPAASYTETRRQTTRDRI 349


>gi|255003475|ref|ZP_05278439.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. Puerto Rico]
          Length = 323

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 141/305 (46%), Gaps = 11/305 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDGIHLGH  I  +  + A   + P  VL+F+PH    ++     F L     + 
Sbjct: 15  LTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPHTAAFLRQRKN-FLLVDFEHKV 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E  G   L   +F  E A  S + FI  VLV   + + V+ G    FG   AG+   
Sbjct: 74  ELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKARHVVVGKDCVFGHKCAGNLKS 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G+    + +   +  +  SSS IR  L  G +  A  LLG R  +   V+ G
Sbjct: 134 LELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGDIETANLLLGRRHVVSGRVLKG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              G+ +GFPT N+ +   +L K GVY  R R      +  GV N G  PT       LL
Sbjct: 193 RGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYWLPGVVNIGTRPTFAEEICPLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           E  +FDF  ++YG+   V    +LRPE KF ++++L         +AR I   +  L   
Sbjct: 253 EMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLV------RHRARHIPRKAKALVAH 306

Query: 319 DRIIC 323
            R++C
Sbjct: 307 LRLLC 311


>gi|262184333|ref|ZP_06043754.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium aurimucosum ATCC 700975]
          Length = 326

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 17/314 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
            S+P  L    V IG FDG+H GH  ++ +A++ A  +     +++F+PHP T+      
Sbjct: 11  DSIPADLGPTSVTIGVFDGLHRGHQQLVTKAVEHARRHGQRAVMVTFDPHPVTVFLPERA 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG  A++   FT E       +++  +LV  L  + V+ G  F 
Sbjct: 71  PLSVITFERRMQLAEEMGIEAVLVIDFTEELRGVEPREYVTDLLVGRLHTEHVVVGENFT 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    L + G + GF  V I  L ++  + + S+NIR AL KG +  A   LG 
Sbjct: 131 FGAGASGTAEALAEFGAELGF-GVDIVPLLDDDGERICSTNIRAALAKGDIARANWALGR 189

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--------- 237
            FT+   V+ G  + G+ LGFPTAN      + +  +GVYA  F  +   +         
Sbjct: 190 HFTVTGPVVRGAGRGGKELGFPTANQYFPESVAIPADGVYAGWFVVEPTGAPLEGDMEPG 249

Query: 238 --YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y    + G NPT   +    +ESF+ D   ++YG   TV F D++R   KF  +E+L 
Sbjct: 250 VPYPAAISVGTNPTF-GDEERSVESFVLDRDADLYGHEATVHFVDHVRDMEKFNSVEELL 308

Query: 296 IYMGEDEKKARKIL 309
             M  D  + R+IL
Sbjct: 309 TAMERDVARVREIL 322


>gi|261878994|ref|ZP_06005421.1| riboflavin biosynthesis protein RibF [Prevotella bergensis DSM
           17361]
 gi|270334379|gb|EFA45165.1| riboflavin biosynthesis protein RibF [Prevotella bergensis DSM
           17361]
          Length = 316

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 7/307 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           I  NQ    ++   V  IG FDG+HLGH  ++E     A    ++  V++F+ HPR ++ 
Sbjct: 4   INFNQDHIANINPCVATIGFFDGVHLGHRFLIEHVRDEAQLMGLSSMVITFDHHPREVLN 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L+    + ++LE  G   ++   F  + +  SA++F+  VL + L V+ +I G
Sbjct: 64  QDYQPELLTTLDAKLQLLENTGVDHVVVLHFDEKMSQLSAQEFMNHVLHDRLHVRKLIIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG +RA       + GE+ G        L+ +  ++ SSS +R  L  G +  A  
Sbjct: 124 YDNRFGHNRAETCEDYVRYGEELGIAVAHHSALKMDGLEL-SSSVVRAFLKGGEIELANR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRT-QDQTSYSGV 241
            LGY ++I   V+HG K GR +G+PTAN+ LS    ++  +GVYA+R +      S   +
Sbjct: 183 CLGYPYSIVGKVVHGFKKGRGIGYPTANLDLSDSHQLVPSDGVYAVRVQIGASGQSLPAM 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              G  PT        LE+ IF+F ++IYGQ+  ++F   +R E +F  + +L   + ED
Sbjct: 243 TGIGLRPTF-GGTERTLETHIFNFHEDIYGQQLRLTFVKRIRAEQRFDHVTQLVNQLKED 301

Query: 302 EKKARKI 308
           EK   K+
Sbjct: 302 EKMIEKL 308


>gi|153812988|ref|ZP_01965656.1| hypothetical protein RUMOBE_03395 [Ruminococcus obeum ATCC 29174]
 gi|149830935|gb|EDM86025.1| hypothetical protein RUMOBE_03395 [Ruminococcus obeum ATCC 29174]
          Length = 310

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 145/286 (50%), Gaps = 20/286 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +G FDGIH GH  +++  +  K        V++F    +TI+ S            +
Sbjct: 17  AVTLGKFDGIHRGHRKLIQTILNRKKEYGELAVVMAFVSDRQTILTSEE----------R 66

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LEKMG   L+      +  +  A+ FI+++L   L+   V+ G  FRFG +R G   
Sbjct: 67  RILLEKMGVDILLECPLNDQIKHMKADVFIRQILKGDLQASCVVVGEDFRFGHERKGSPE 126

Query: 139 ILQKRGEKYGFHTVFI-DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           +L+K GEKY + T+ I  E+  N+   +SS+ IR  L KG++   A LLG  F     + 
Sbjct: 127 LLEKYGEKYDYETIVIAKEMEGNRK--ISSTYIREELKKGNMEKIADLLGSPFFTAGVIE 184

Query: 198 HGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HG  +G    FPTAN+ + P   ++   GVY      +D   Y G+ N G  PT+  N  
Sbjct: 185 HGRGMGHRDFFPTANI-IPPKSKLMPPNGVYVTVSHLED-GDYPGITNVGYKPTVGENF- 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           L +E+ +FD   ++YGQ+C V F+ Y+RPE KF   E LK  +  D
Sbjct: 242 LGVETNLFDCDLDLYGQKCRVDFYKYIRPEQKFTSFEALKAQIRRD 287


>gi|295395378|ref|ZP_06805577.1| riboflavin biosynthesis protein RibF [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971700|gb|EFG47576.1| riboflavin biosynthesis protein RibF [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 316

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 156/295 (52%), Gaps = 8/295 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +GNFDG+H+GH  +L   +++A+   +T L+  F+PHP  + +       ++    + K 
Sbjct: 18  LGNFDGVHIGHQAVLRTLVRVADERGLTSLAMTFDPHPVAVHRPDHKPQLITGLDEKLKR 77

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +   G  A +   ++LE A+ SAE+FI+  L   + V+ ++ G   RFG+   GD   LQ
Sbjct: 78  IAATGVDATLVQPYSLEFADQSAEEFIE-FLARDVGVRAIVVGRDVRFGRGNEGDLATLQ 136

Query: 142 KRGEKYGFHTVF-IDELRNNKS-QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
             G+++G  TV  ID+L + +    VSS++IR+ L  G+V +AA +LG    +   V++G
Sbjct: 137 NLGQRHGVETVVAIDDLGDGEGLSRVSSTHIRSLLLDGNVEDAARMLGRPHVVTGTVVNG 196

Query: 200 EKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
              GR +GFPTAN+      ++  +GVYA      D     G  + G NPT   +   + 
Sbjct: 197 NARGREMGFPTANIGGDVAGLIPSDGVYAGWVYFADGRQQPGAISVGSNPTFDGDDRRVE 256

Query: 259 ESFI-FDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +  +F   ++YG+   V F  ++R +I+F  ++ L   M +D K    +LE+
Sbjct: 257 VNVVGVEFPDMDVYGEPARVEFVAHIRGQIEFSGMDALIEQMRDDVKNVSAVLEA 311


>gi|88809113|ref|ZP_01124622.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805]
 gi|88787055|gb|EAR18213.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805]
          Length = 312

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 147/293 (50%), Gaps = 4/293 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A+G+FDG+H GH  +++           TV+SF PHPR ++    P   L  P  +  
Sbjct: 19  ALALGSFDGLHAGHRRVIKAITTDPEGGHPTVVSFWPHPREVLHGE-PRLRLDLPDEKLH 77

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L+ +G   L+   FT + +  SA  F+ +VL+  L+ + +  G  FRFG+ R GD   L
Sbjct: 78  LLDPLGIDQLVLVPFTKQLSQLSAADFVDQVLLTTLQARHIAVGANFRFGRGREGDTTTL 137

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +     G     +  L + + ++ SSS IR AL+ G +  AA LLG  +  + +V+ G 
Sbjct: 138 ARLASAAGVKVSVVPILEDGEGRM-SSSRIRAALSAGELNRAATLLGRAYHFQGEVVRGR 196

Query: 201 KIGRTLGFPTANMQLSPDILLKE-GVYAI-RFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +GR LG+PTAN+Q+     L   GVYA   +   + T    V N G  PT+ P  P  +
Sbjct: 197 GLGRGLGWPTANLQVDGRKFLPGLGVYAAWAWVDGNGTRLPAVMNLGPQPTVDPGSPSAV 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E  + D  +E+ G+   V     LR + +F  +E+L   +  D   AR+ L +
Sbjct: 257 EVHLLDVEKELVGRTIRVEPVRRLRGQKRFAGLEELSNQIKRDADAARETLRA 309


>gi|257878518|ref|ZP_05658171.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,230,933]
 gi|257812746|gb|EEV41504.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,230,933]
          Length = 313

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P       S++
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
           EK   +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  EKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCTYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + +DE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKKDEQ 304


>gi|227833347|ref|YP_002835054.1| putative riboflavin biosyntheis protein ribF [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454363|gb|ACP33116.1| putative riboflavin biosyntheis protein ribF [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 339

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 17/314 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
            S+P  L    V IG FDG+H GH  ++ +A++ A  +     +++F+PHP T+      
Sbjct: 24  DSIPADLGPTSVTIGVFDGLHRGHQQLVTKAVEHARRHGQRAVMVTFDPHPVTVFLPERA 83

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG  A++   FT E       +++  +LV  L  + V+ G  F 
Sbjct: 84  PLSVITFERRMQLAEEMGIEAVLVIDFTEELRGVEPREYVTDLLVGRLHTEHVVVGENFT 143

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    L + G + GF  V I  L ++  + + S+NIR AL KG +  A   LG 
Sbjct: 144 FGAGASGTAEALAEFGAELGF-GVDIVPLLDDDGERICSTNIRAALAKGDIARANWALGR 202

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS--------- 237
            FT+   V+ G  + G+ LGFPTAN      + +  +GVYA  F  +   +         
Sbjct: 203 HFTVTGPVVRGAGRGGKELGFPTANQYFPESVAIPADGVYAGWFVVEPTGAPLEGDMEPG 262

Query: 238 --YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y    + G NPT   +    +ESF+ D   ++YG   TV F D++R   KF  +E+L 
Sbjct: 263 VPYPAAISVGTNPTF-GDEERSVESFVLDRDADLYGHEATVHFVDHVRDMEKFNSVEELL 321

Query: 296 IYMGEDEKKARKIL 309
             M  D  + R+IL
Sbjct: 322 TAMERDVARVREIL 335


>gi|311739670|ref|ZP_07713505.1| riboflavin biosynthesis protein RibF [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311305486|gb|EFQ81554.1| riboflavin biosynthesis protein RibF [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 340

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 22/319 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA---NNSPITVLSFNPHPRTI-IQSS 66
             +P  +    V IG FDG+H GH  ++   ++ A      P+ V +F+PHP ++ +   
Sbjct: 11  DDIPAEVGPTSVTIGVFDGLHRGHQQLISACVEHARAHGERPVMV-TFDPHPVSVFLPER 69

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +P+  LS     E + E+MG +A++   FT + A      +++ +LV  L  + ++ G  
Sbjct: 70  APLSVLSFERRLE-LAEEMGIAAVLVIDFTRDLAGVEPRPYVEDLLVGKLAAQHIVVGEN 128

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG    G    +Q  G ++GF +V I  L ++K   + S++IR  L +G + +A   L
Sbjct: 129 FTFGAGATGTAQAMQDFGAEFGF-SVDIVPLLDDKGVRICSTHIRECLAQGDIESANWAL 187

Query: 187 GYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTS------ 237
           G  FT+   V+ G  + G+ LGFPTAN Q  PD +    +GVYA  F     +S      
Sbjct: 188 GRHFTVTGPVVRGAGRGGKELGFPTAN-QYFPDTVAIPADGVYAGWFIVHSDSSIEGDMR 246

Query: 238 ----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++
Sbjct: 247 PGVAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGYEATVHFVGHLRDMVKFNSVDE 305

Query: 294 LKIYMGEDEKKARKILESS 312
           L   M  D  KAR++L + 
Sbjct: 306 LLEAMVNDVAKARQVLAAD 324


>gi|126652564|ref|ZP_01724729.1| hypothetical protein BB14905_03230 [Bacillus sp. B14905]
 gi|126590692|gb|EAZ84808.1| hypothetical protein BB14905_03230 [Bacillus sp. B14905]
          Length = 316

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 12/291 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSIQ 78
           +A+G FDG+H GH  +++ A +       P  V++F+PHP  ++   +  +F ++    +
Sbjct: 23  LALGFFDGVHRGHQAVIKAAKEEGEKRQIPSAVMTFDPHPSLVLGGRNEKVFYITLLQQK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++ E+ G   +    FT + A  S   FI    +  L ++ V  G  + FG   A  +G
Sbjct: 83  LQLFEEQGVDTVFVVHFTSDFAKLSPAAFID-TFIRGLNIQHVTAGFDYSFG---AFGKG 138

Query: 139 ILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            ++  R    G + V I E R +  + +SS+ IR  L +G +  A  LLG  F I   V+
Sbjct: 139 TMEDMRALSNGDYGVTIVEKRTDDVEKISSTRIRQLLQEGDMEAARTLLGRPFEINGMVV 198

Query: 198 HGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGP 255
           HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+   Y GV N G  PT   PN  
Sbjct: 199 HGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN-AWYDGVCNVGYKPTFKDPNDK 257

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E  I +F + IYG+   V+++  +R E KF  I+ LK  + +D+++A
Sbjct: 258 QLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGIDALKTQIEKDKQEA 308


>gi|306836340|ref|ZP_07469319.1| riboflavin biosynthesis protein RibF [Corynebacterium accolens ATCC
           49726]
 gi|304567775|gb|EFM43361.1| riboflavin biosynthesis protein RibF [Corynebacterium accolens ATCC
           49726]
          Length = 340

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 20/318 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTI-IQSSS 67
             +P  +    V IG FDG+H GH  ++   ++   ANN    +++F+PHP ++ +   +
Sbjct: 11  DDIPADVGPTSVTIGVFDGLHRGHQQLVSACVEHARANNQVPVMVTFDPHPVSVFLPERA 70

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P+  +S     E + E+MG   ++   FT E        +++ +LV  L  + V+ G  F
Sbjct: 71  PVSVVSFERRLE-LAEEMGIEMVLVIDFTKELEGVEPRPYVRDLLVGKLHAQHVVVGENF 129

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG   +G    +++ GE++GF    I  L  +  QI  S+ IR +L++G + +A   LG
Sbjct: 130 TFGAGASGTAEAMRQLGEEFGFSVDIIPLLDEDGVQI-CSTYIRQSLSRGAIESANWALG 188

Query: 188 YRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL--KEGVYAIRF----------RTQD 234
             FT+   V+ G  + G+ LGFPTAN Q  PD +    +GVYA  F            Q 
Sbjct: 189 RHFTVTGPVVRGAGRGGKELGFPTAN-QYFPDTVAIPADGVYAGWFIVHSESPLDGDMQP 247

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + +Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++L
Sbjct: 248 EVAYAAAISVGTNPTF-GDEERSVESFVLDRDADLYGYEATVKFVGHLRDMVKFHSVDEL 306

Query: 295 KIYMGEDEKKARKILESS 312
              M +D   AR +L + 
Sbjct: 307 LEAMAQDVAAARTVLAAD 324


>gi|254251625|ref|ZP_04944943.1| Riboflavin kinase / FAD synthetase [Burkholderia dolosa AUO158]
 gi|124894234|gb|EAY68114.1| Riboflavin kinase / FAD synthetase [Burkholderia dolosa AUO158]
          Length = 330

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 159/323 (49%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L + G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLAAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLQKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           + +D   AR          ERDR
Sbjct: 296 IAQDVANARAY------FIERDR 312


>gi|313885878|ref|ZP_07819618.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924633|gb|EFR35402.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 317

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 14/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G FDG+HLGH  ++ Q + IA    +T  V++F PHP+ ++    P   ++    +
Sbjct: 11  VVAMGAFDGVHLGHQALIHQVLTIAKQDHLTSGVVTFEPHPQLVLHPERPFRLITLEREK 70

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E +L +MG   +    FT+  +  SAE+F++  L E L++ T++ G    FG D+     
Sbjct: 71  ELLLHQMGIERVAVIPFTVALSQMSAEEFLRTYLDEQLQIHTLVVGFDHHFGHDKGLAFE 130

Query: 139 ILQKRGEKYGFHTVFIDE--LRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             Q    +YG   +  +   L ++ SQ  +SS+ IR  +  G V  A   LG+ +TI   
Sbjct: 131 DYQAIAHRYGIRCIRGEAYTLGDSTSQDPISSTAIRRWIDTGAVTEAERQLGHPYTILGK 190

Query: 196 VIHGEKIGRTLGFPTANMQL-SP-DILLKEGVYAIR-----FRTQDQTSYSGVANFGRNP 248
           V  G +IGR LG+PTAN+++ SP   L   GVY  R     F    Q     +   G  P
Sbjct: 191 VKTGLQIGRKLGYPTANIEVPSPHKALPPAGVYMARTTIDPFGASQQRDIPSMLYIGTRP 250

Query: 249 TM-VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T+ +     ++E F+    + ++YGQ   +S  D LR E+ F+ ++ L+  +  DE+  R
Sbjct: 251 TLELAEEETMIEVFLMGGEEYQLYGQELQISLCDRLRQELHFESLDALRKQITRDEEAVR 310

Query: 307 K 307
           +
Sbjct: 311 R 311


>gi|107023449|ref|YP_621776.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116690531|ref|YP_836154.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|105893638|gb|ABF76803.1| FMN adenylyltransferase [Burkholderia cenocepacia AU 1054]
 gi|116648620|gb|ABK09261.1| FMN adenylyltransferase [Burkholderia cenocepacia HI2424]
          Length = 330

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 20/323 (6%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           +  D   AR         +ERDR
Sbjct: 296 IALDVANARAY------FTERDR 312


>gi|227503417|ref|ZP_03933466.1| FAD synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075920|gb|EEI13883.1| FAD synthetase [Corynebacterium accolens ATCC 49725]
          Length = 340

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 18/317 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSP 68
             +P  +    V IG FDG+H GH  ++   ++   ANN    +++F+PHP ++      
Sbjct: 11  DDIPADVGPTSVTIGVFDGLHRGHQQLVSACVEHARANNQVPVMVTFDPHPVSVFLPERA 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG   ++   FT E        +++ +LV  L  + V+ G  F 
Sbjct: 71  PLSVVSFERRLELAEEMGIEMVLVIDFTKELEGVEPRPYVRDLLVGKLHAQHVVVGENFT 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    +++ GE++GF    I  L  +  QI  S+ IR +L++G + +A   LG 
Sbjct: 131 FGAGASGTAEAMRQLGEEFGFSVDIIPLLDEDGVQI-CSTYIRQSLSRGAIESANWALGR 189

Query: 189 RFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL--KEGVYAIRF----------RTQDQ 235
            FT+   V+ G  + G+ LGFPTAN Q  PD +    +GVYA  F            Q +
Sbjct: 190 HFTVTGPVVRGAGRGGKELGFPTAN-QYFPDTVAIPADGVYAGWFIVHSESPLDGDMQPE 248

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++L 
Sbjct: 249 VAYAAAISVGTNPTF-GDEERSVESFVLDRDADLYGYEATVKFVGHLRDMVKFHSVDELL 307

Query: 296 IYMGEDEKKARKILESS 312
             M +D   AR +L + 
Sbjct: 308 EAMAQDVAAARTVLAAD 324


>gi|153937918|ref|YP_001391712.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum F str. Langeland]
 gi|152933814|gb|ABS39312.1| riboflavin biosynthesis protein RibF [Clostridium botulinum F str.
           Langeland]
 gi|295319739|gb|ADG00117.1| riboflavin biosynthesis protein RibF [Clostridium botulinum F str.
           230613]
          Length = 306

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 162/291 (55%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  N+    VL+F  HP  TI +  +P   L  PS +
Sbjct: 18  IALGSFDGLHKGHMKLIKEIKKMAKDNSGKSMVLTFKDHPLNTINKDLAPKILLDNPS-K 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KIL++ G   +    F  E      E FI+K ++ +      + G  +RFG    GD  
Sbjct: 77  VKILKENGVDLVNFINFDKEYMKLCPEDFIKK-MIYYYNAGGFVVGFNYRFGYKNLGDIE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  A  +LG  + ++ +++
Sbjct: 136 LLDKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGNIV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 195 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VEDKKL 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF+++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 253 NIETHILDFNKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKNFAKR 303


>gi|78187630|ref|YP_375673.1| riboflavin kinase / FAD synthetase [Chlorobium luteolum DSM 273]
 gi|78167532|gb|ABB24630.1| FMN adenylyltransferase / riboflavin kinase [Chlorobium luteolum
           DSM 273]
          Length = 320

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII--QSSSPIFTLSPPSI 77
           V +G FDG+H GH  I+ + + IA    +   V++F+PHPR ++  + + P+  L+  ++
Sbjct: 29  VTVGAFDGVHRGHRKIISRMVSIARQRALRSVVVTFDPHPRRVLGGEVTGPLGLLT--TL 86

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           +EKI  L       L   +FT E A  S+E+FI+ VLV  L  K+++ G    FG++R+G
Sbjct: 87  EEKITLLRSADVDLLFVVRFTPEFAMQSSEEFIKNVLVGLLGAKSIVIGYDHGFGRNRSG 146

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L++ G + GF      E+R       SS+ IR  L  G +  A   LG  +TI   
Sbjct: 147 SGDDLRRLGLELGFTVDVESEVRIADEHF-SSTRIRQLLGLGRIEEANAFLGSFYTISGT 205

Query: 196 VIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           V+ G+  GR LGFPT N+ + PD   +L + GVY       D  S+  + N G  PT+  
Sbjct: 206 VVEGDGRGRGLGFPTVNIHI-PDPHKLLPQSGVYVAESNI-DGLSWMAMMNVGVRPTVED 263

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G   +E+ I  +   +YG+  + +   ++R E KF  +E L+  + +D+K
Sbjct: 264 GGRTSVEAHILGWEGSLYGRELSFNLLHFIRRERKFPTLEALRQQLEKDKK 314


>gi|223933474|ref|ZP_03625458.1| riboflavin biosynthesis protein RibF [Streptococcus suis 89/1591]
 gi|330832927|ref|YP_004401752.1| riboflavin biosynthesis protein RibF [Streptococcus suis ST3]
 gi|223897847|gb|EEF64224.1| riboflavin biosynthesis protein RibF [Streptococcus suis 89/1591]
 gi|329307150|gb|AEB81566.1| riboflavin biosynthesis protein RibF [Streptococcus suis ST3]
          Length = 307

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 156/306 (50%), Gaps = 18/306 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           H  E+NQ  P      V+ +G FDGIHLGH  +L++A ++A+     +TVL+F   PR  
Sbjct: 8   HYSELNQEEPT-----VLVLGYFDGIHLGHKALLDRARQVADEKGLSVTVLTFPETPRLA 62

Query: 63  IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               SP   L   S  ++  +LE+ G   L+   FT E A+ + +QF+++  ++ L  + 
Sbjct: 63  FSRFSPELLLHLTSQDQRYHLLEQYGVDQLVLTDFTSEFASNTPQQFLER-YIKGLNAQV 121

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  + FG  RA     +    E +      + E+     + VSS+ IR A+  G V 
Sbjct: 122 LVAGFDYHFGNCRAD----VTDLTELFDGQVEIVSEVSLGGEK-VSSTRIRQAIQSGEVS 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYS 239
            A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D   Y 
Sbjct: 177 LANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DGKRYR 235

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L   M 
Sbjct: 236 AMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLMEQMK 294

Query: 300 EDEKKA 305
            DEK A
Sbjct: 295 SDEKFA 300


>gi|296330882|ref|ZP_06873357.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674400|ref|YP_003866072.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151887|gb|EFG92761.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412644|gb|ADM37763.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 316

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 164/305 (53%), Gaps = 19/305 (6%)

Query: 14  PNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII-QS 65
           P+HL        V+A+G FDG+HLGH  ++  A +IA      + V++F+PHP  ++ + 
Sbjct: 9   PHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLALAVMTFHPHPSHVLGRD 68

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             P   ++P  +++KI  +E++G   L   KF    A+ S +QF  + ++  L V+  + 
Sbjct: 69  QEPKDLITP--LEDKINQIEQLGTEILYVVKFNEVFASLSPKQFADQYII-GLNVQHAVA 125

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G V  A+
Sbjct: 126 GFDFTYGKYGKGTMETMPHDLD--GKAECTMVEKLTEQDKKISSSYIRTALQNGDVELAS 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++     +  Y+GV 
Sbjct: 184 ILLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEMNGEV-YNGVC 242

Query: 243 NFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L   + +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQIEK 302

Query: 301 DEKKA 305
           D+++A
Sbjct: 303 DKQEA 307


>gi|124268229|ref|YP_001022233.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Methylibium
           petroleiphilum PM1]
 gi|124261004|gb|ABM95998.1| FMN adenylyltransferase / riboflavin kinase [Methylibium
           petroleiphilum PM1]
          Length = 349

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 29/316 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            V +GNFDG+H GH  +L      A +  +  TVL+F PHPR    + +     +P  I 
Sbjct: 19  AVTVGNFDGVHRGHQAMLALLKSEAEHRDLLSTVLTFEPHPRDFFAARAGTPAKAPARIA 78

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L + G   ++  +F    A+ S + FI  VL+  ++ + V+ G  F FG  R
Sbjct: 79  TLRDKLGELARCGVQRVVVLRFDQTFADQSPQAFIDDVLLRGVKARYVLVGDDFCFGAKR 138

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   GE+ GF     D  R    ++    VSSS +R AL  G +     LLG  
Sbjct: 139 AGDYAMLDAAGERQGF-----DVARMMSYEVHGLRVSSSAVREALGAGDMALVTRLLGRP 193

Query: 190 FTIESDVIHGEKIGRTL--------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           ++I   V HG K+GR L        GF T N++         G+Y +R          GV
Sbjct: 194 YSISGHVTHGRKLGRELGAGPDGGDGFRTLNLRFPHPKPAAHGIYVVRTHGLTAEPLDGV 253

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           A+ G  PT+  +G +LLE    D+   +     YG+   V     LR E ++  +  L  
Sbjct: 254 ASLGARPTVDDSGRVLLEVHCLDWPAHLGAEGGYGKLVRVELLHKLRDEARYDGLAALTA 313

Query: 297 YMGEDEKKARKILESS 312
            + +D  +AR+ L SS
Sbjct: 314 AIAQDVSQARQWLTSS 329


>gi|302522230|ref|ZP_07274572.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB78]
 gi|302431125|gb|EFL02941.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB78]
          Length = 320

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 10/316 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  AL+   FT E +  S   F + VL E L  K V+ G  FR
Sbjct: 68  PPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHAKVVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G +  F    +D   +  +   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA       +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVAGEAMPAAI-SV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R   KF  I++L   M +D K
Sbjct: 247 GTNPQFDAK-HRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDELLTAMADDVK 305

Query: 304 KARKILESSYPLSERD 319
           ++R ++ + Y  + +D
Sbjct: 306 RSRALI-AEYEANHQD 320


>gi|293568129|ref|ZP_06679466.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1071]
 gi|291589211|gb|EFF21022.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1071]
          Length = 313

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCTYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +  Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GEIWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + EDE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQ 304


>gi|312952292|ref|ZP_07771167.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0102]
 gi|310629676|gb|EFQ12959.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0102]
 gi|315153255|gb|EFT97271.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0031]
          Length = 316

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++ +   
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIKVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|227529112|ref|ZP_03959161.1| FAD synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350956|gb|EEJ41247.1| FAD synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 328

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 7/298 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDG+H GH  ++  A KIA     P+ VL+++  P  + Q     F  LS  S 
Sbjct: 27  VLAMGFFDGVHRGHQQVINTAKKIAEEKDLPLAVLTYDHAPGIVYQQYPGGFKYLSTTSR 86

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L+++G   +    FT   A+ S ++F+ + L+ +   KTV+ G    +GK      
Sbjct: 87  KLDLLKQLGVDLVYLVSFTSSFASLSPQEFVDQYLIGF-HAKTVVAGFDHTYGKAAVATM 145

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +      F+ + + +   N  Q + S  IR A+ +G V  A  +LGY +     V+
Sbjct: 146 ARLPEYANGR-FNVITVPKFTGNGKQKIGSRVIRKAIDQGDVELANQMLGYYYMTTGIVV 204

Query: 198 HGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG   GRTLGFPT N++    + L   GVY ++ +   Q  Y G+A+ G N T      L
Sbjct: 205 HGLARGRTLGFPTINVETPEGERLPGIGVYTVQVQI-GQKWYGGMASVGHNITFGDQNKL 263

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +E ++FDF Q +YG+   V +  Y R E+KF   ++L   M +DE+ AR+ L+   P
Sbjct: 264 TVEIYLFDFDQLVYGEEVKVRWLYYQRGEMKFSGADELVDQMKQDEQLARQNLQKIVP 321


>gi|315924367|ref|ZP_07920589.1| riboflavin biosynthesis protein RibF [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622246|gb|EFV02205.1| riboflavin biosynthesis protein RibF [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 303

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 6/276 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G FDG+H GH  +LE+ + IA  N+    V++F  HP  +I  +     ++  + + 
Sbjct: 13  LALGFFDGVHKGHQKLLEKTMVIAEANHWLSGVMTFESHPLKLIFPAYAPKMITTNAQKT 72

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             ++ MG   +   +FT E  N S E FI+  L+    V+ ++ G  + FG   AG    
Sbjct: 73  AAMKAMGIDRIFINQFTEELMNLSPEAFIRDYLLLKYNVRHLVVGFNYTFGYKGAGMTKD 132

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L   G +YGF TV +        + VSS+ IR  +  G V +   LLG  + +E  ++ G
Sbjct: 133 LVDFGSEYGF-TVSVMPPCVIGGETVSSTRIRELVATGKVEDVPPLLGRPYAVEGKIVTG 191

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++G T   PTAN+Q    +++   GVY  +    D   Y G+ N G NPT   + P  +
Sbjct: 192 KRLGHTFDVPTANLQSDVSVIMPSTGVYFTKVEL-DGKQYDGLTNLGYNPTFDKH-PYSI 249

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           E++I+DF+Q IYG    VSF   +R EIKF+ ++ L
Sbjct: 250 ETYIYDFNQNIYGHHLKVSFLKKIRDEIKFESVDAL 285


>gi|184201245|ref|YP_001855452.1| riboflavin kinase/FMN adenylyltransferase [Kocuria rhizophila
           DC2201]
 gi|183581475|dbj|BAG29946.1| flavokinase/FAD synthetase [Kocuria rhizophila DC2201]
          Length = 341

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 39/324 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
            V IGNFDG+H GH  +  + +  A   ++   V++F+PHP  + +  S P   +    +
Sbjct: 18  AVTIGNFDGVHRGHQEVFTRLLNAARERHARSVVVTFDPHPALVHRPESHPGLIMG---L 74

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           ++K+  LE+ G  A++   ++LE +  S E+F+   LV+ L    ++ G+  R G+D  G
Sbjct: 75  EDKLDALERTGVDAVLVLPYSLEFSELSPERFVVDYLVDPLGAVALVIGSDVRLGRDNTG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKS-------------------QIVSSSNIRTALTK 176
           D   +++ G ++GF  V ++++    S                   +  SS+ +R+ L  
Sbjct: 135 DLSAIRELGRQHGFEVVVVEDVPGTPSSRGEDGHGDEPGTAGRREDRRCSSTWVRSCLEA 194

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQ 233
           G +  AA LLG    +  +V+HG   GR LGFPTAN  L+P+    +  +GVYA     Q
Sbjct: 195 GDIAGAARLLGRPHRMRGEVVHGAARGRELGFPTAN--LAPEATGFIPADGVYAGWLVDQ 252

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE------IYGQRCTVSFFDYLRPEIK 287
           D T +    + G NPT        +E+ + D  +E      +YGQ   V F + LR  + 
Sbjct: 253 DGTRWPTAISVGSNPTF-EGVTRQVEAHVIDRPEEAVEDFDLYGQTVVVEFVERLRGMVA 311

Query: 288 FKDIEKLKIYMGEDEKKARKILES 311
           ++ I+ L   M +D  + R IL +
Sbjct: 312 YRGIDALVQQMRDDVNRTRDILRT 335


>gi|303240811|ref|ZP_07327324.1| riboflavin biosynthesis protein RibF [Acetivibrio cellulolyticus
           CD2]
 gi|302591699|gb|EFL61434.1| riboflavin biosynthesis protein RibF [Acetivibrio cellulolyticus
           CD2]
          Length = 312

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 9/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +GNFDG+H+ H  ++   I  +    +   + +F  HP  II+    +FT    S+ +
Sbjct: 19  IGLGNFDGLHVAHMALINTLISESKQGSLESILYTFTKHPENIIRKK--LFTPLITSVNK 76

Query: 80  K--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           K  +LE          +F    +  S E F++ +LV+ L++K  +TG  +RFG    GD 
Sbjct: 77  KMRLLEVTQLDYTYFEEFDESFSRMSPEAFVRDILVDKLKMKLAVTGVDYRFGYKGQGDV 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+  G KY +  V I  ++ +   IVSS+ IR  + KG + +A  LLG  ++I   V 
Sbjct: 137 EYLKVLGRKYNYKVVTIPPIKID-DDIVSSTLIRKHVKKGDMDSAFKLLGRHYSITGIVE 195

Query: 198 HGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G++IG TLGFPTAN+     +L+  +GVY  R     +  Y+ + N G NPT      L
Sbjct: 196 KGKRIGNTLGFPTANIYPEEYLLIPLDGVYVTRTLLNGRM-YNSITNIGNNPTFEGQKVL 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E++I D++++IYG+   V F   +R E KF  +++L   +  D K AR+
Sbjct: 255 SIETYILDYNEDIYGEGIEVFFLQKIRGEKKFNGVDELVDQIKRDIKSARE 305


>gi|227329318|ref|ZP_03833342.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 281

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 133/271 (49%), Gaps = 1/271 (0%)

Query: 45  ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
           A   P+ V+ F P P  +  +      L+    + K L + G   L+  +F    A   A
Sbjct: 12  ARGLPVMVMIFEPQPLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDA 71

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           E F+  +LV+ L  K ++ G  FRFG  R GD  +LQK G + GF  +  D   N   + 
Sbjct: 72  ETFVSSLLVKKLGAKFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVISTDSFCNGGKR- 130

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           VSS+ +R AL++  +  A  LLG+ ++I   V HG+++GRT+GFPTAN+ L   +    G
Sbjct: 131 VSSTAVREALSRDELELAESLLGHPYSISGRVEHGKELGRTIGFPTANLPLKRQVSPVSG 190

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
           VYA+      Q    GVAN G  PT+  +    LE  + D +  +YG+   V     +R 
Sbjct: 191 VYAVSVYGLGQEPLPGVANIGTRPTVNGDKRQQLEVHLLDVTMNLYGRHIEVVLRKKIRN 250

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E +F  ++ LK  + +D   AR       P+
Sbjct: 251 EQRFASLDALKQQIADDVVTARTFFGLKTPV 281


>gi|153806062|ref|ZP_01958730.1| hypothetical protein BACCAC_00313 [Bacteroides caccae ATCC 43185]
 gi|149130739|gb|EDM21945.1| hypothetical protein BACCAC_00313 [Bacteroides caccae ATCC 43185]
          Length = 328

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 13/303 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +IA    +   +++F  HPR ++ ++     L+ P  +
Sbjct: 16  VATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVHPRKVMNAAYRPELLTTPKEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G    +   FT + +  +A +F+ ++L E  +VK ++ G   RFG +R+    
Sbjct: 76  ISLLADIGVDYCLMLDFTPDISQLTAREFMNRLLKERYQVKCLVIGYDHRFGHNRSEGFE 135

Query: 139 ILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
                G++ G   +         E+   ++  VSSS IR  L +G V  AA  L Y + +
Sbjct: 136 DYVCYGKEIGIEVIRAQAYTSDIEIGTTRNIPVSSSLIRKLLHEGEVEIAARCLKYEYFL 195

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +  V+ G ++GR +GFPTAN+ +  PD L+  +GVYA+ + T D  +Y G+ N G  PT 
Sbjct: 196 DGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAV-WVTFDGKTYMGMLNIGVRPT- 253

Query: 251 VPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + NGP   +E  I  F   IY +   ++F    RPE+KF  I++L + + +D ++   IL
Sbjct: 254 IDNGPNRTIEVNILHFHSNIYDKFIRLTFVKRTRPELKFSSIDELIVQLHKDAEETEAIL 313

Query: 310 ESS 312
            +S
Sbjct: 314 LAS 316


>gi|308173630|ref|YP_003920335.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606494|emb|CBI42865.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553438|gb|AEB23930.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           amyloliquefaciens TA208]
          Length = 313

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 21/311 (6%)

Query: 9   INQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           I+ S P+HL+       V+A+G FDG+HLGH  ++  A +IA    ++  V++F+PHP  
Sbjct: 4   IHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPHPSH 63

Query: 62  II-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           ++ +   P   ++P  +++KI  + ++G   L   KF    A  S +QF +  ++  L  
Sbjct: 64  VLGRDKEPKDLITP--LEDKISQIGRLGADVLYIVKFDEAFAALSPKQFAEDYIL-GLNA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +  + G  F +GK   G    L    +  G       E +  + + +SS+ IR+AL  G 
Sbjct: 121 QHAVGGFDFTYGKYGKGTMATLPD--DLNGKAECTTVEKQTEQDRKISSTYIRSALQDGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L+   I+   GVYA++   + +  
Sbjct: 179 VELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANIGLNNSYIVPPTGVYAVKAEIKGE-K 237

Query: 238 YSGVANFGRNPTMV---PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           Y GV N G  PT     P+ P  +E  +FDF Q++YG+   + ++  +R E KF  I++L
Sbjct: 238 YEGVCNIGYKPTFYEKRPDQP-SIEVHLFDFQQDVYGEDVKIEWYKRIRSERKFNGIDEL 296

Query: 295 KIYMGEDEKKA 305
              + +D+++A
Sbjct: 297 TAQIEKDKQEA 307


>gi|257887091|ref|ZP_05666744.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,141,733]
 gi|257823145|gb|EEV50077.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,141,733]
          Length = 313

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 154/289 (53%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMADLGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCIYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + +DE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELIEQLKDDEQ 304


>gi|255325198|ref|ZP_05366304.1| riboflavin biosynthesis protein RibF [Corynebacterium
           tuberculostearicum SK141]
 gi|255297763|gb|EET77074.1| riboflavin biosynthesis protein RibF [Corynebacterium
           tuberculostearicum SK141]
          Length = 340

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 159/319 (49%), Gaps = 22/319 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA---NNSPITVLSFNPHPRTI-IQSS 66
             +P  +    V IG FDG+H GH  ++   ++ A      P+ V +F+PHP ++ +   
Sbjct: 11  DDIPAEMGPTSVTIGVFDGLHRGHQQLIAACVEHARAHGERPVMV-TFDPHPVSVFLPER 69

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +P+  LS     E + E+MG + ++   FT + A      +++ +LV  L  + ++ G  
Sbjct: 70  APLAVLSFERRLE-LAEEMGIATVLVIDFTRDLAGVEPRPYVEDLLVGKLAAQHIVVGEN 128

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG    G    +Q  G +YGF +V I  L +++   + S++IR  L +G + +A   L
Sbjct: 129 FTFGAGATGTAQAMQDFGAEYGF-SVDIVPLLDDEGVRICSTHIRECLAQGDIESANWAL 187

Query: 187 GYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQT------- 236
           G  FT+   V+ G  + G+ LGFPTAN Q  PD +    +GVYA  F     +       
Sbjct: 188 GRHFTVTGPVVRGAGRGGKELGFPTAN-QYFPDTVAIPADGVYAGWFIVHSDSDIEGDMR 246

Query: 237 ---SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              +Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++
Sbjct: 247 PGVAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGYEATVHFVGHLRDMVKFNSVDE 305

Query: 294 LKIYMGEDEKKARKILESS 312
           L   M  D  KAR++L + 
Sbjct: 306 LLEAMANDVAKARQVLAAD 324


>gi|85058391|ref|YP_454093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Sodalis
           glossinidius str. 'morsitans']
 gi|84778911|dbj|BAE73688.1| riboflavin biosynthesis protein [Sodalis glossinidius str.
           'morsitans']
          Length = 312

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 145/312 (46%), Gaps = 10/312 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           HN++     P H  G V+ IGNFDG H GH  ++   QA       P+ V+ F P P+  
Sbjct: 8   HNLQ-----PRH-HGCVLTIGNFDGFHRGHQALIAELQAEGRRRGLPVMVMIFEPQPQEH 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    L+    + K L   G  A +   F    A  SA  F+  +LV+ L V+ + 
Sbjct: 62  FAGDAAPARLTRLRDKVKYLAAAGVDATVCVTFDKRFAALSARAFVTDLLVKKLGVRFIG 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  R GD  +LQ+ G++ GF  +          +I SS+ +R  L +  +  A
Sbjct: 122 VGDDFRFGAWRQGDFALLQQAGKEAGFEVMSTVTYTEGGRRI-SSTAVRETLAQDRLSEA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG+ +G+T+GFPTAN+ L        GVYA+      +    GVA
Sbjct: 181 EMLLGHPYRLSGRVVHGDALGQTIGFPTANVSLKGRQAPINGVYAVEVHGLAERPLPGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT V      LE  + D  + +YG+   V     +R E +F  ++ LK  +  D 
Sbjct: 241 NIGTRPT-VAGLRQRLEVHLLDVDKNLYGRHIEVVIRAKVRNEQRFASLDDLKRQIANDV 299

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 300 VSARDYFGLATP 311


>gi|89101189|ref|ZP_01174020.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. NRRL B-14911]
 gi|89084098|gb|EAR63268.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. NRRL B-14911]
          Length = 318

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 157/303 (51%), Gaps = 14/303 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPSIQ 78
           +A+G FDG+HLGH  ++ +A K A    +   V++F+PHP  ++ +S   I  ++P   +
Sbjct: 22  MALGYFDGVHLGHQKVILEAKKAAEQKGLKSAVMTFDPHPSVVLGKSVQHIEYITPLEDK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K + K+G   L   +F+   A+   ++F  + L+  L  + ++ G  + +G+   G   
Sbjct: 82  IKEISKLGADYLFVVEFSSSFASLLPQEFADQYLI-GLNARHIVAGFDYSYGRMGKGTME 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L     +   +TV +D+L +   +I SS+ IR  + +GH      LLG  +T    VIH
Sbjct: 141 TLPFHSREEFTYTV-VDKLTDGTEKI-SSTLIRQKIREGHTEELPGLLGRYYTTRGTVIH 198

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+K GRT+GFPTAN+ +    I    GVYA R R  D +   GV N G  PT   N P  
Sbjct: 199 GDKRGRTIGFPTANIDIGTSYIYPPTGVYAARMRV-DGSWVEGVCNVGYKPTF--NKPAA 255

Query: 258 ----LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
               +E  +FDFS+EIYG    + +  YLR E KF  +++L   +  D+  A    E++ 
Sbjct: 256 DRPSIEVHLFDFSREIYGSEVEIEWHRYLRSERKFSGVDELVAQISRDKDAAVGYFENNE 315

Query: 314 PLS 316
            L+
Sbjct: 316 GLT 318


>gi|328911771|gb|AEB63367.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens LL3]
          Length = 313

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 21/311 (6%)

Query: 9   INQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
           I+ S P+HL+       V+A+G FDG+HLGH  ++  A +IA    ++  V++F+PHP  
Sbjct: 4   IHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPHPSH 63

Query: 62  II-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           ++ +   P   ++P  +++KI  + ++G   L   KF    A  S +QF +  ++  L  
Sbjct: 64  VLGRDKEPKDLITP--LEDKISQIGRLGADVLYIVKFDEAFAALSPKQFAEDYIL-GLNA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +  + G  F +GK   G    L    +  G       E +  + + +SS+ IR+AL  G 
Sbjct: 121 QHAVGGFDFTYGKYGKGTMATLPD--DLNGKAECTTVEKQTEQDRKISSTYIRSALQDGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L+   I+   GVYA++   + +  
Sbjct: 179 VELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANIGLNNSYIVPPTGVYAVKAEIKGE-K 237

Query: 238 YSGVANFGRNPTMV---PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           Y GV N G  PT     P+ P  +E  +FDF Q++YG+   + ++  +R E KF  I++L
Sbjct: 238 YEGVCNIGYKPTFYEKRPDQP-SIEIHLFDFQQDVYGEDVKIEWYKRIRSERKFNGIDEL 296

Query: 295 KIYMGEDEKKA 305
              + +D+++A
Sbjct: 297 TAQIEKDKQEA 307


>gi|291519305|emb|CBK74526.1| riboflavin kinase/FMN adenylyltransferase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 308

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 14/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDGIH GH L+    I K        +++F   PR +++  S     +P  I  
Sbjct: 17  AVTVGKFDGIHRGHTLLTSDIISKKEQGLKSCLITFTNSPRFLLKEDS-----TPSLITN 71

Query: 80  K----ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           K    +L+  G   LI   F        A+ FI+  LV+ L +K +I+G+ F FG   AG
Sbjct: 72  KERMFMLDNNGLDYLIECPFDERLMQTDAKSFIE-FLVKNLNMKYMISGSDFTFGHKGAG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +L K  ++ GF    I++++ +   I SS+ IR  L +GH+     +LGY + +  +
Sbjct: 131 NARLLLKLSKELGFEYKVIEKIKKDNRDI-SSTYIREELKEGHIDCVNEMLGYDYFVWGE 189

Query: 196 VIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG  +G  +G PT N M     ++ K GVY       D   Y GV N G  P++    
Sbjct: 190 VVHGAHLGHKIGIPTINIMPGKVKLVPKFGVYVTTIDF-DGRIYHGVTNVGTKPSVSDEN 248

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            + +E+ I D++ ++YG+   V+F  +LRPE+KF  IE+LK  M  D+ KA+
Sbjct: 249 VVGIETHILDYNGDLYGKFVKVTFESFLRPEMKFNSIEELKNQMNADKIKAK 300


>gi|226943308|ref|YP_002798381.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Azotobacter
           vinelandii DJ]
 gi|226718235|gb|ACO77406.1| riboflavin biosynthesis protein RibF [Azotobacter vinelandii DJ]
          Length = 274

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 128/252 (50%), Gaps = 12/252 (4%)

Query: 49  PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           P  V+ F P PR           L+    + ++L   G   ++   F       SA  F+
Sbjct: 4   PSCVVIFEPQPREFFSPQRAPARLTRLREKLELLAAQGVDRVLCLAFNRRLCELSARAFV 63

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFH-----TVFIDELRNNKSQ 163
           Q VLVE L V+ +  G  FRFG DRAGD   L + G   GF      TV +D LR     
Sbjct: 64  QSVLVEGLGVRHLEVGDDFRFGCDRAGDFEFLCQTGVAEGFTVEAAVTVEVDGLR----- 118

Query: 164 IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE 223
            VSS+ +R AL+ G +  A  LLG  F++   V+HG+K+GR LG PTAN+QL    +   
Sbjct: 119 -VSSTRLRAALSHGDLPLAERLLGRPFSLCGRVLHGQKLGRQLGTPTANVQLKRRRVPLT 177

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           GVY +     D   + GVAN G  P++  +G   LE+ + DF+ ++YG+   V+F   LR
Sbjct: 178 GVYLVSTEL-DGRRWPGVANIGVRPSVTGDGRAHLEAHLLDFAGDLYGRHLCVTFHHKLR 236

Query: 284 PEIKFKDIEKLK 295
            E +F  ++ LK
Sbjct: 237 DEERFASLDALK 248


>gi|256762290|ref|ZP_05502870.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T3]
 gi|256683541|gb|EEU23236.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T3]
 gi|295112832|emb|CBL31469.1| riboflavin kinase/FMN adenylyltransferase [Enterococcus sp. 7L76]
 gi|315145602|gb|EFT89618.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2141]
 gi|315160312|gb|EFU04329.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0645]
          Length = 316

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G + L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVNILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|206901756|ref|YP_002250937.1| riboflavin biosynthesis protein RibF [Dictyoglomus thermophilum
           H-6-12]
 gi|206740859|gb|ACI19917.1| riboflavin biosynthesis protein RibF [Dictyoglomus thermophilum
           H-6-12]
          Length = 527

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 161/303 (53%), Gaps = 23/303 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSF-NPHPRTIIQSSSPIFTLSP 74
           KG  + IG FDG+HLGH  I+++ +  A  NN    V++F N  P+ +   SS + T   
Sbjct: 18  KGFAITIGVFDGLHLGHTSIIDELVNTALINNLNSGVITFENAFPQNLKNISSFLLTSD- 76

Query: 75  PSIQEKILEKMGFSAL--IRYKFTL----ETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
                   EK+ F +L  + Y F L    E  + S E+FI+ +LV  + +  +  G+ F 
Sbjct: 77  --------EKLNFFSLKGVDYSFILPFSEEIRSLSPEKFIE-LLVNTIPISCLCVGSNFF 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R+GD   L++ GEKY F+   +  L    S IVSSS IR  L +G +  A  LLGY
Sbjct: 128 FGKNRSGDVNTLRELGEKYNFNLKIV-PLEKEDSNIVSSSYIRNLLLEGKINIANKLLGY 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           ++ I   V  G+ +G  +GFPT N++   + L+ K G+Y  + + + +  Y+     G  
Sbjct: 187 KYFINGIVERGDNLGSKIGFPTVNIKYEKEKLIPKTGIYKGKVKVR-RDIYNAAIYIGTR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E++I DF+  +YG++  +   DY+R + KF   +KL+  + +D +  R 
Sbjct: 246 PTF-GGKETRVEAYILDFNDHLYGEKVEIVLEDYVRSDQKFDSTDKLRAQIQKDLEVIRD 304

Query: 308 ILE 310
           +++
Sbjct: 305 LIK 307


>gi|255021602|ref|ZP_05293645.1| Riboflavin kinase / FMN adenylyltransferase [Acidithiobacillus
           caldus ATCC 51756]
 gi|254968990|gb|EET26509.1| Riboflavin kinase / FMN adenylyltransferase [Acidithiobacillus
           caldus ATCC 51756]
          Length = 323

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 147/298 (49%), Gaps = 23/298 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   + IGNFDG+H GH     QA+  A + P+ +VL+F P PR           LS  S
Sbjct: 23  RATALTIGNFDGVHRGH-----QALITAMDGPVRSVLTFEPLPREYFHREQAPARLS--S 75

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK   L + G   +   +F    A+ SAE F++++L   L  ++V  G  FRFG  R 
Sbjct: 76  LREKASALSRTGVDEIYVARFDGALASLSAEDFVREILHRRLGAQSVHVGHDFRFGAGRR 135

Query: 135 GDRGILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GD  +L + G + GF         +D  R      VSS+ IR  L  G +  AA  LG  
Sbjct: 136 GDFDLLARMGRQLGFRVQEQPPFCLDGER------VSSTGIRQFLHAGKMDAAARWLGRP 189

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V+ G++IGR LGFPTAN+ L+       G++A    T  Q S+    + G  PT
Sbjct: 190 YAICGRVVGGDRIGRELGFPTANIDLARRPPPLRGIFAGVLHTPRQ-SWPAAISIGLRPT 248

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            V    LLLE+   D + ++YGQR  V      R E  +  +++L   +G+D  K R+
Sbjct: 249 -VGGKRLLLEAHCLDVTVDLYGQRVEVQLLHKWRDEAHYAQLDELIAAIGQDVAKTRQ 305


>gi|306833554|ref|ZP_07466681.1| riboflavin biosynthesis protein RibF [Streptococcus bovis ATCC
           700338]
 gi|304424324|gb|EFM27463.1| riboflavin biosynthesis protein RibF [Streptococcus bovis ATCC
           700338]
          Length = 313

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 13/293 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP--IFTLS 73
           K  V+ +G FDG+H GH  + ++A +IA  +N  +TVL+FN  PR  +   +P  + +L+
Sbjct: 19  KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNESPRLALSHFTPDLLLSLT 78

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  + +   + G   L    FT   +  SA+ F++   ++ L  KT++ G  ++FG DR
Sbjct: 79  SPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLEN-YIKQLRAKTIVIGFDYKFGHDR 137

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                + Q+    +    V + E+++N  +I SS+ IR  +  G++     LLGY F+  
Sbjct: 138 KDATDLAQQ----FNGDVVVVPEVQDNGEKI-SSTRIRQLIFDGNIKEVNRLLGYNFSTR 192

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+    ++ L  +GVY        + SY  + + G+N T   
Sbjct: 193 GIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVYVSDVIVNGK-SYRAMTSVGKNITF-G 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
              L LE+ IFDF  EIYG+   + + D +R  +KF   ++L   +  D++ A
Sbjct: 251 GTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELIEQLKSDKEVA 303


>gi|257898246|ref|ZP_05677899.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com15]
 gi|257836158|gb|EEV61232.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com15]
          Length = 313

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 11/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P  +  L+   
Sbjct: 21  VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAG 135
            +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A 
Sbjct: 81  QKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIAD 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E  
Sbjct: 140 VAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCIYEVEGV 196

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T     
Sbjct: 197 VVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            L +E +I DF+Q+IYG+   V +  +LR ++KF   E+L   + EDE+
Sbjct: 256 ELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSAEELIEQLKEDEQ 304


>gi|288905361|ref|YP_003430583.1| riboflavin kinase / FAD synthetase [Streptococcus gallolyticus
           UCN34]
 gi|288732087|emb|CBI13652.1| putative riboflavin kinase / FAD synthetase [Streptococcus
           gallolyticus UCN34]
          Length = 310

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 13/293 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FDG+H GH  + ++A +IA  +N  +TVL+FN  PR  +   +S  + +L+
Sbjct: 16  KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNESPRLALSRFTSDLLLSLT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  + +   + G   L    FT   +  SA+ F++   ++ L  KT++ G  ++FG DR
Sbjct: 76  SPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLEN-YIKQLRAKTIVVGFDYKFGHDR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                + Q+    +    V + E+++N  +I SS+ IR  + +G++     LLGY F+  
Sbjct: 135 KDAIDLAQQ----FNGDVVVVPEVQDNGEKI-SSTRIRQLIFEGNIKEVNRLLGYNFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+    ++ L  +GVY        + SY  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVYVSNVIVNGK-SYRAMTSVGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
              L LE+ IFDF  EIYG+   + + D +R  +KF   ++L   +  D++ A
Sbjct: 248 GTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELIEQLKSDKEVA 300


>gi|78044293|ref|YP_360582.1| riboflavin biosynthesis protein RibF [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996408|gb|ABB15307.1| riboflavin biosynthesis protein RibF [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 307

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 15/311 (4%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M VFH   E   + P      V+A+GNFDG+HLGH  +L     +A    +   V +F P
Sbjct: 1   MQVFHGSREFTLNCPV-----VLALGNFDGVHLGHQKLLRVTRDLAGKIGACPGVYTFWP 55

Query: 58  HPRTIIQSSSPIFTLS-PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HP  ++Q     + L     ++    E++ F+ L    FT E A  S  +FI  +L+E  
Sbjct: 56  HPLEVLQGKQVKYILPLDERLKRFAAEELEFTVL--ESFTPEYARLSPGEFIN-MLLENF 112

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  V+ G  + FG   AG    L K GE++GF    ++ +   + ++VSS+ IR  L  
Sbjct: 113 NLAGVVAGFNYTFGHLGAGRVTDLIKAGERFGFKVEVVEPVTFGQ-EVVSSTAIREKLAA 171

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFR-TQD 234
           G +     +LGY + ++  VI G+K+ R +GFPTAN+    +++L + GVY +    T +
Sbjct: 172 GDIAKVNGMLGYTYFLKGKVIGGDKLARKIGFPTANILPEENLVLPQYGVYRVDVEITGE 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +    G+AN G  PT+      LLE  + ++   +Y +   VSF   +RPE KF  +E+L
Sbjct: 232 EVKIPGIANLGVRPTVKVESRPLLEVHLLNYKANLYHRELKVSFLKKIRPEKKFNSLEEL 291

Query: 295 KIYMGEDEKKA 305
           K  +  D K+A
Sbjct: 292 KKQIELDVKEA 302


>gi|293510043|ref|ZP_06668751.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M809]
 gi|291466987|gb|EFF09505.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M809]
          Length = 229

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 130/225 (57%), Gaps = 13/225 (5%)

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           F+   AN S E F++  +++   VK VI G  F FGK   G+  +LQ   E   F+T  +
Sbjct: 4   FSSRFANVSVEDFVENYIIK-NNVKEVIAGFDFTFGKFGKGNMTVLQ---EYDAFNTTIV 59

Query: 155 D--ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
              E+ N K   +S+++IR  L  G +  A   LGY ++I+  V+ GEK GRT+GFPTAN
Sbjct: 60  SKQEIENEK---ISTTSIRQDLINGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTAN 116

Query: 213 MQLSPDILL-KEGVYAIRFRTQDQTS-YSGVANFGRNPTM-VPN-GPLLLESFIFDFSQE 268
           +Q S D LL ++GVYA+      +   Y GVAN G  PT   PN   +++E  IFDF   
Sbjct: 117 IQPSDDYLLPRKGVYAVSIEIGTENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDN 176

Query: 269 IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           IYG+R TV++  +LRPEIKF  I+ L   M +D+ +A+ +L   +
Sbjct: 177 IYGERVTVNWHHFLRPEIKFDGIDPLVKQMNDDKSRAKYLLAVDF 221


>gi|269956015|ref|YP_003325804.1| riboflavin biosynthesis protein RibF [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304696|gb|ACZ30246.1| riboflavin biosynthesis protein RibF [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 330

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 18/305 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  +L + + +A         L+F+PHP  + +  +    L+  + +
Sbjct: 27  VVTIGNFDGVHRGHQAVLGRVVGLARADDRAAVALTFDPHPAQVHRPDAAPELLTGLTDK 86

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             ++ + G   ++   +TLE A  + ++F+ + LVE L  +TV+ G   RFGKD +G+  
Sbjct: 87  LALMAETGLDGVLVVPYTLELAALTPDEFVTRYLVEALRARTVVVGHDVRFGKDNSGNLA 146

Query: 139 ILQKRGEKYGFHTVFIDELRNNK------SQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            +   G  +GF  V +D++  ++      S   SSS  R  L +G V  AA +LG    +
Sbjct: 147 SMVDLGGVHGFEVVAVDDIGLSRLRTPGGSARWSSSAARLLLAEGDVAGAAAILGRPHRL 206

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF------RTQDQTSYSGVANFGR 246
              V+HG+  GR LGFPTAN+     ++  +GVYA R                   + G 
Sbjct: 207 RGVVVHGDARGRLLGFPTANLGRISGMVPADGVYAGRLLRPSLDDAHPDRDLPAAVSVGT 266

Query: 247 NPTMVPNG-PLLLESFI-FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           NPT   +G    +E+++      ++Y +   V   D LRP ++F  ++ L   M +D  +
Sbjct: 267 NPTF--DGVDRRVEAYVLDRDDLDLYDEEVVVELVDRLRPTLRFDGVDALVAQMHDDVDR 324

Query: 305 ARKIL 309
           AR IL
Sbjct: 325 ARGIL 329


>gi|118617701|ref|YP_906033.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium ulcerans Agy99]
 gi|118569811|gb|ABL04562.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 21/321 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSS 67
              +P      V+ +G FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRARGVPTVMMTFDPHPMEVVYPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + ++FI ++L E L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRFIHELLFEHLHVVEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG    L+  GE++GF       + E  +N++   SS+ IR+ +  G V+ A  
Sbjct: 127 TFGKKAAGSVDTLRHAGERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVDAGDVMAATE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---- 237
            LG    +E  V+ G   G  LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 187 ALGRPHRVEGVVVRGYGRGAELGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGA 244

Query: 238 ------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF  +
Sbjct: 245 VIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVALDFVARIRGQKKFASV 303

Query: 292 EKLKIYMGEDEKKARKILESS 312
            +L   +G D ++ R +L + 
Sbjct: 304 PELVAEIGADTERTRVLLSTG 324


>gi|315079492|gb|EFT51485.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL053PA2]
          Length = 336

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 20/314 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 33  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 90

Query: 65  SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                  L   S++ +I  L+  G S +    FT E A+++   F+++VL   L+ + V+
Sbjct: 91  PDQAPALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVL 147

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  A
Sbjct: 148 VGQNFRFGRQAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEA 203

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS-- 239
           A LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA              
Sbjct: 204 AELLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRR 263

Query: 240 --GVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT   +G    +E+++ D    E+YG   TV+F + LR +IKF  IE L 
Sbjct: 264 LPSAISVGTNPTF--DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLI 321

Query: 296 IYMGEDEKKARKIL 309
             M +D + A+++L
Sbjct: 322 SQMADDVETAKRVL 335


>gi|227518557|ref|ZP_03948606.1| FAD synthetase [Enterococcus faecalis TX0104]
 gi|227553084|ref|ZP_03983133.1| FAD synthetase [Enterococcus faecalis HH22]
 gi|256618873|ref|ZP_05475719.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ATCC 4200]
 gi|256958781|ref|ZP_05562952.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis DS5]
 gi|256962112|ref|ZP_05566283.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Merz96]
 gi|256965310|ref|ZP_05569481.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis HIP11704]
 gi|257078811|ref|ZP_05573172.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis JH1]
 gi|257086640|ref|ZP_05581001.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis D6]
 gi|257089698|ref|ZP_05584059.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis CH188]
 gi|257415912|ref|ZP_05592906.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis AR01/DG]
 gi|257419114|ref|ZP_05596108.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T11]
 gi|293383137|ref|ZP_06629054.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis R712]
 gi|293387710|ref|ZP_06632255.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis S613]
 gi|294781162|ref|ZP_06746511.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis PC1.1]
 gi|300860011|ref|ZP_07106099.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TUSoD
           Ef11]
 gi|307271225|ref|ZP_07552508.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4248]
 gi|307273416|ref|ZP_07554661.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0855]
 gi|307277579|ref|ZP_07558671.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2134]
 gi|307288268|ref|ZP_07568266.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0109]
 gi|312899422|ref|ZP_07758753.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0470]
 gi|312904044|ref|ZP_07763212.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0635]
 gi|312907275|ref|ZP_07766266.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           512]
 gi|312909893|ref|ZP_07768741.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           516]
 gi|227073976|gb|EEI11939.1| FAD synthetase [Enterococcus faecalis TX0104]
 gi|227177770|gb|EEI58742.1| FAD synthetase [Enterococcus faecalis HH22]
 gi|256598400|gb|EEU17576.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ATCC 4200]
 gi|256949277|gb|EEU65909.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis DS5]
 gi|256952608|gb|EEU69240.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Merz96]
 gi|256955806|gb|EEU72438.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis HIP11704]
 gi|256986841|gb|EEU74143.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis JH1]
 gi|256994670|gb|EEU81972.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis D6]
 gi|256998510|gb|EEU85030.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis CH188]
 gi|257157740|gb|EEU87700.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160942|gb|EEU90902.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T11]
 gi|291079476|gb|EFE16840.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis R712]
 gi|291082899|gb|EFE19862.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis S613]
 gi|294451729|gb|EFG20182.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis PC1.1]
 gi|300850829|gb|EFK78578.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TUSoD
           Ef11]
 gi|306500784|gb|EFM70104.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0109]
 gi|306505844|gb|EFM75022.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2134]
 gi|306509943|gb|EFM78968.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0855]
 gi|306512723|gb|EFM81372.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4248]
 gi|310626303|gb|EFQ09586.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           512]
 gi|310632520|gb|EFQ15803.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0635]
 gi|311289851|gb|EFQ68407.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           516]
 gi|311293466|gb|EFQ72022.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0470]
 gi|315027469|gb|EFT39401.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2137]
 gi|315033690|gb|EFT45622.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0017]
 gi|315036774|gb|EFT48706.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0027]
 gi|315147775|gb|EFT91791.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4244]
 gi|315150723|gb|EFT94739.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0012]
 gi|315164165|gb|EFU08182.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1302]
 gi|315166735|gb|EFU10752.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1341]
 gi|315169975|gb|EFU13992.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1342]
 gi|315575648|gb|EFU87839.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis
           TX0309B]
 gi|315578391|gb|EFU90582.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0630]
 gi|315579908|gb|EFU92099.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis
           TX0309A]
 gi|323480525|gb|ADX79964.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis 62]
 gi|327534918|gb|AEA93752.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis OG1RF]
          Length = 316

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|262282381|ref|ZP_06060149.1| riboflavin biosynthesis protein RibF [Streptococcus sp. 2_1_36FAA]
 gi|262261672|gb|EEY80370.1| riboflavin biosynthesis protein RibF [Streptococcus sp. 2_1_36FAA]
          Length = 305

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 18/311 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           +H+ +  +I Q+     +  V+ +G FDG+H GH  +  +A +IA      I VL+F   
Sbjct: 4   IHISNEKDIQQT-----QDTVLVLGYFDGLHRGHQALFAEARQIAAEKKLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +E++LE  G   L    FT   A   A+ F +K  V+ L
Sbjct: 59  PKLAFVRYQPDLLLHLNSPEEREQLLEAQGVDYLYLIDFTSCFAGNKAKDFFEK-FVKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  + FG D+   + + Q     +    V +  + N   + +SS+ IR A+ +
Sbjct: 118 KARAVVAGFDYHFGSDKKEAKELSQF----FDGQIVIVSSV-NEDDEKISSTRIRQAIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V +A  LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY +     + 
Sbjct: 173 GRVADATKLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVFLPGDGVYVVEVE-HNG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T      L  E+ IFDFS++IYG    + + D +R  +KF  IE L 
Sbjct: 232 ERYKGMASVGKNVTF-EGDELRFEANIFDFSKDIYGDTIKIYWLDKIRDMVKFDGIESLL 290

Query: 296 IYMGEDEKKAR 306
             +  DE  AR
Sbjct: 291 NQLKSDEAIAR 301


>gi|288556938|ref|YP_003428873.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pseudofirmus OF4]
 gi|288548098|gb|ADC51981.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pseudofirmus OF4]
          Length = 315

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 159/292 (54%), Gaps = 13/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
           V+A+G FDG+H+GH  ++E A + A    +   V++F+PHP+ +++  + P+  L+P  +
Sbjct: 21  VLALGYFDGVHIGHKKVIETACRQAAKLGVEAAVMTFHPHPKEVLRKEAHPMPYLTPLPL 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG-- 135
           +EK + ++G   L    FT E A+ + +QF+   ++  L+   V+ G  F +G    G  
Sbjct: 81  KEKKIAELGVDTLYVVNFTKEFASLTPQQFVDDYIIS-LDAVHVVAGFDFTYGSLGKGTM 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +   R +   F    + ++     +I SS+ IR  + +G V      LG  + +   
Sbjct: 140 ETLVFHSRNK---FDQTTVSKVEQGDIKI-SSTKIRELIEEGSVEKIPAYLGEPYYVLGK 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM-VPN 253
           V+ G+K GRT+GFPTAN+     + + K GVYA+RF+ +    Y+GV N G  PT     
Sbjct: 196 VVDGDKRGRTIGFPTANVAAIDRMKIPKTGVYAVRFQVKGNW-YNGVCNIGYKPTFNQEK 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
               +E  IFDF+QEIYG++  V F   +R E KF +I +L   + +D+++A
Sbjct: 255 KEPTIEVNIFDFNQEIYGEQAVVVFERRIRAEKKFNEINELISQINKDKEEA 306


>gi|116629474|ref|YP_814646.1| FAD synthase [Lactobacillus gasseri ATCC 33323]
 gi|311110881|ref|ZP_07712278.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri MV-22]
 gi|116095056|gb|ABJ60208.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus gasseri
           ATCC 33323]
 gi|311066035|gb|EFQ46375.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri MV-22]
          Length = 312

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 158/290 (54%), Gaps = 7/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ +G FDG+H+GH  +++ A  IA     P+ V++F+ HP+ I ++      L     +
Sbjct: 20  ILTLGFFDGVHIGHQKLIKDAKLIAKEKKLPLMVMTFDKHPKEIYKNDHKFVYLETAREK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E+ +EK+G   L+  KFT + +    + F+ +V+++ L+  TV+ G  + +G     +  
Sbjct: 80  EQKMEKLGVDYLVIIKFTKKFSQLKPQDFVDQVIMK-LKADTVVVGFDYTYGPKDIANVE 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K  +  G   + ++  ++     V S+ IR A+  G+V  AA LLG  +     ++H
Sbjct: 139 NLPKFAQ--GRFQIMVEPKQSIDKIKVGSTYIRKAIQHGNVELAAALLGQPYETSGIIVH 196

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N T   N  L 
Sbjct: 197 GFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKINGKW-HDAMTSVGYNETFKTNHGLT 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E+ IF+F +E YG+  T+S++ ++R   KF  IE+L   + +D++  ++
Sbjct: 256 IETNIFNFDEEAYGKPLTLSWYKFIRSNKKFSGIEELSRQLDQDKRNIKQ 305


>gi|229546029|ref|ZP_04434754.1| FAD synthetase [Enterococcus faecalis TX1322]
 gi|229550219|ref|ZP_04438944.1| FAD synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972996|ref|ZP_05423582.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T1]
 gi|307291277|ref|ZP_07571161.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0411]
 gi|229304657|gb|EEN70653.1| FAD synthetase [Enterococcus faecalis ATCC 29200]
 gi|229308872|gb|EEN74859.1| FAD synthetase [Enterococcus faecalis TX1322]
 gi|255964014|gb|EET96490.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T1]
 gi|306497508|gb|EFM67041.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0411]
 gi|315030953|gb|EFT42885.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4000]
 gi|315155967|gb|EFT99983.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0043]
 gi|315157863|gb|EFU01880.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0312]
          Length = 316

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|257082745|ref|ZP_05577106.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis E1Sol]
 gi|257085446|ref|ZP_05579807.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Fly1]
 gi|256990775|gb|EEU78077.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis E1Sol]
 gi|256993476|gb|EEU80778.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Fly1]
 gi|315174382|gb|EFU18399.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1346]
          Length = 316

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN     V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPNDEV--VMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|256852936|ref|ZP_05558306.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis T8]
 gi|257422819|ref|ZP_05599809.1| riboflavin biosynthesis protein ribF [Enterococcus faecalis X98]
 gi|256711395|gb|EEU26433.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis T8]
 gi|257164643|gb|EEU94603.1| riboflavin biosynthesis protein ribF [Enterococcus faecalis X98]
          Length = 318

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 6   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 62

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 63  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 121

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 122 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 178

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 179 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 238

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 239 KW-YVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 297

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 298 IDQLKQDERDTADYFQQS 315


>gi|29375863|ref|NP_815017.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis V583]
 gi|29343325|gb|AAO81087.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis V583]
          Length = 318

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 6   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 62

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 63  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 121

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 122 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 178

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 179 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 238

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 239 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 297

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 298 IDQLKQDERDTADYFQQS 315


>gi|120612102|ref|YP_971780.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Acidovorax
           citrulli AAC00-1]
 gi|120590566|gb|ABM34006.1| FMN adenylyltransferase [Acidovorax citrulli AAC00-1]
          Length = 349

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 150/338 (44%), Gaps = 42/338 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            V IGNFDG+H GH  +L      A +  +   VL+F PHPR     +     L+P  I 
Sbjct: 17  AVTIGNFDGVHRGHQAMLALLASEAAHRGVESCVLTFEPHPRDYFAGALRRPELAPARIG 76

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L + G    +   F    A    + FI  VLV  L  + V+ G  FRFG  R
Sbjct: 77  TLRDKLEELARCGVQQAVVLPFNERLARQPPQAFIDDVLVRGLGARYVLVGDDFRFGAQR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G + GF     D  R N  ++    VSSS +R AL +G++  AA LLG  
Sbjct: 137 AGDYAMLDAAGRERGF-----DVARMNSYEVHGLRVSSSAVRDALARGNMGAAAALLGRP 191

Query: 190 FTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           + I   V+HG K+GR L         GF T N++ +       G++A+           G
Sbjct: 192 YAISGHVVHGRKLGRALGASAEGAGDGFRTLNLRFAHWKPAAGGIFAVLVHGLCDAPLPG 251

Query: 241 VANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDI 291
           VAN G  P++ PN    G +LLE+    +   +     YG+   V     L  E+K+   
Sbjct: 252 VANLGVRPSLDPNDVNGGRVLLETHCLQWPAHLGPEGAYGKIVRVELLHKLHDELKYDSF 311

Query: 292 EKLKIYMGEDEKKARKILESSYPLS--------ERDRI 321
           + L   +  D + AR    S+   S         RDRI
Sbjct: 312 DALTAGIARDCEDARAYFASTPAASYTETRRQTTRDRI 349


>gi|281422624|ref|ZP_06253623.1| riboflavin biosynthesis protein RibF [Prevotella copri DSM 18205]
 gi|281403294|gb|EFB33974.1| riboflavin biosynthesis protein RibF [Prevotella copri DSM 18205]
          Length = 318

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 155/300 (51%), Gaps = 17/300 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ Q ++ A    +  TV++F+ HPR ++ +      LS    +
Sbjct: 22  VATIGFFDGVHRGHQFLIHQLVETARKDGLQSTVITFDAHPRKVLLADYQPEMLSTLDSK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L K      +   F    A  SA +F+Q+VL + L V+ +  G   RFG +R     
Sbjct: 82  LLLLSKTEVDNAVVLHFDKAMAAMSAREFMQQVLHDHLNVRKLFIGYDHRFGHNREETFE 141

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              + G++ G     I+ +RN   QI    +SSS IR+ L +G V  AA  LG+ +T+  
Sbjct: 142 DYVRYGKEMG-----IEVIRNEAFQIDGINISSSVIRSFLKEGEVEMAARSLGFPYTLIG 196

Query: 195 DVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS-GVANFGRNPTMV 251
            V++G   GR LGFPTAN+ +S    ++   GVYA+R R ++   +  G+ N G  PT  
Sbjct: 197 KVVNGFHEGRKLGFPTANLDISHFGQLIPAPGVYAVRVRLENMVEWKRGMMNVGNRPTF- 255

Query: 252 PNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            NG  L LE+ IF+F  +IY Q   VSF   +R E KF   E+L   + EDE+    + E
Sbjct: 256 -NGRQLTLETHIFNFEGDIYDQLLLVSFVKRIRGEQKFDSPEELAAQLKEDEQTVLDLFE 314


>gi|269219593|ref|ZP_06163447.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269210835|gb|EEZ77175.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 331

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 19/312 (6%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           + +P+ L G  V IG FDG+H GH  +L + ++ A    +    L+F+PHP ++  S+  
Sbjct: 10  EDIPSGLVGTAVTIGVFDGVHKGHRAVLRETVRQAKERGLVSVALTFDPHPASV-HSAQN 68

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +  +S  +++++I  L   G  A+   ++TL+ A  +  +F +  LV  L  + V+ G  
Sbjct: 69  VHLVS--TLEDRIDRLAAAGIDAVYVQRYTLDYARATPREFFENQLVGELRARVVVVGED 126

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            RFG    GD  +L + GE+ G     + +L   + +  SS+ +R  L  G V  AA +L
Sbjct: 127 VRFGFRNEGDGAVLAELGEEKGVDVTLVSDLAAPEGRRWSSTWVRELLAAGDVAGAARVL 186

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK---EGVYAIRFRTQDQTSYS---- 239
           G R  I  +V+HG + GR +GFPTAN  L+ D L +   +GVYA       + S +    
Sbjct: 187 GRRHRIRGEVVHGFQRGRAIGFPTAN--LAGDDLGEVPADGVYAGWLVRSVEGSCAAEYL 244

Query: 240 -GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP         +E  +   S   +YG+   V F +YLRP + F  +E L   
Sbjct: 245 PAAISVGTNPHF-EGTERTVEVHVLGRSDLNLYGESIAVDFVEYLRPMLSFDSLEGLLGQ 303

Query: 298 MGEDEKKARKIL 309
           M ED +   +IL
Sbjct: 304 MDEDLRNTAEIL 315


>gi|303238105|ref|ZP_07324644.1| riboflavin biosynthesis protein RibF [Prevotella disiens
           FB035-09AN]
 gi|302481700|gb|EFL44756.1| riboflavin biosynthesis protein RibF [Prevotella disiens
           FB035-09AN]
          Length = 315

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 21/303 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG FDG+HLGH  +L +   +A  S +  TV++F+ HPR ++QS      LS  ++ 
Sbjct: 18  IATIGFFDGVHLGHQFLLNKLADMAQQSDLEATVITFDRHPRQVLQSDYQPKMLS--TLD 75

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L++     ++   F    A  SA  F++ VL   L VK +I G   RFG +R+  
Sbjct: 76  EKLTKLQQTRVDNVVVIHFDKNFAQLSARIFMETVLKNQLNVKKLIMGYDNRFGHNRSET 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTI 192
                  G++ G        L+N+   +    VSSS +R  + +G +  A   LG  + I
Sbjct: 136 FEDYVAYGQEIGMEV-----LQNSALTLGDVNVSSSVVRRLVERGDMEAAQKCLGTPYII 190

Query: 193 ESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPT 249
           +  V++G + GR LGFPTAN+++  S  +L   GVYA++   ++ +T+Y G+ + G  PT
Sbjct: 191 KGKVVNGFQNGRKLGFPTANIEVDSSEKLLPPTGVYAVKVVLENGKTTYGGMLDIGTRPT 250

Query: 250 MVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              NG    +E  IFDF  ++YG   +VSF   LR ++KF  IE L   + ED+ +   I
Sbjct: 251 F--NGKNQTIEVNIFDFEGDLYGSMLSVSFVKRLRDDVKFDSIEALIAQLHEDKTQVISI 308

Query: 309 LES 311
           L +
Sbjct: 309 LNA 311


>gi|289428756|ref|ZP_06430439.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J165]
 gi|289158154|gb|EFD06374.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J165]
          Length = 361

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 20/314 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 58  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 115

Query: 65  SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                  L   S++ +I  L+  G S +    FT E A+++   F+++VL   L+ + V+
Sbjct: 116 PDQAPALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVL 172

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  A
Sbjct: 173 VGQNFRFGRHAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEA 228

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS-- 239
           A LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA              
Sbjct: 229 AELLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRR 288

Query: 240 --GVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT   +G    +E+++ D    E+YG   TV+F + LR +IKF  IE L 
Sbjct: 289 LPSAISVGTNPTF--DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLI 346

Query: 296 IYMGEDEKKARKIL 309
             M +D + A+++L
Sbjct: 347 SQMADDVETAKRVL 360


>gi|238854736|ref|ZP_04645066.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 269-3]
 gi|260663968|ref|ZP_05864821.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932873|ref|ZP_06338270.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|313472260|ref|ZP_07812752.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 1153]
 gi|238832526|gb|EEQ24833.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 269-3]
 gi|239529655|gb|EEQ68656.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 1153]
 gi|260561854|gb|EEX27823.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           SJ-7A-US]
 gi|281302908|gb|EFA95113.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
          Length = 312

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 164/295 (55%), Gaps = 9/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H+GH  ++++A ++A     P+ VL+F+ HP+ I    +    L   S +
Sbjct: 20  VLALGFFDGVHIGHQKLIKRAQEVAKKKQLPLMVLTFDRHPKEIYLGRTDFEYLDNLSEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGDR 137
            K +EK+G   L    FT   +  S ++F+ +V+++ L+  TV+ G  + +G KD A   
Sbjct: 80  AKKMEKLGVDYLAVAPFTEGFSKLSPQEFVDQVIIK-LKADTVVAGFDYTYGPKDIANME 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +      K  F  V + E  +  S+I  S+ IR A+  G++  A +LLG  + +   V 
Sbjct: 139 NL--PYFAKNRFEIVILPEQTSGGSKI-GSTAIRQAIRDGNLELATNLLGSHYIMSGIVG 195

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG + G  LGFPT N+ L+   ++ K GVYA R     +  Y  + + G N T+  +  +
Sbjct: 196 HGLRNGHKLGFPTINLILNGRKVIPKIGVYATRTLVHGKW-YDSMTSVGYNVTIQASKKI 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +ES++FDF+++IY +  ++ ++ Y R EIKF  +++LK  + +DEK+ R   ++
Sbjct: 255 YIESYLFDFNEDIYDEEISIEWYHYTRGEIKFASLDELKKQLIKDEKEIRNYFDN 309


>gi|283769351|ref|ZP_06342250.1| riboflavin biosynthesis protein RibF [Bulleidia extructa W1219]
 gi|283104008|gb|EFC05392.1| riboflavin biosynthesis protein RibF [Bulleidia extructa W1219]
          Length = 305

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 11/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++++ +++A       T++SF P PR +I+  S    +   S +
Sbjct: 19  VACIGYFDGLHRGHQALVQKTLEVAKQMKAVPTMISFEPDPRVVIKGISNFKHIMTMSDR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + EK+G    +   FT E A    + FI ++L + L +K ++ G  F FG+   GD  
Sbjct: 79  FSLAEKLGIEKFVLLDFTKEMAALKPQAFIDQILGQ-LHLKGLVCGFDFHFGQYGQGDYH 137

Query: 139 ILQKRGEKYGFHTVF-IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            LQK+ +    + VF ID++ + + +I SS+ I  A+ KG +    HLLG  ++ E  VI
Sbjct: 138 FLQKQCD----YPVFRIDKVEDQQGKI-SSTRIGKAIQKGRMEEVNHLLGREYSSEGRVI 192

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG   G +L FPTAN+  S +++L K GVY   +   D      + N G NP++     L
Sbjct: 193 HGLHNGHSLHFPTANIDYSEELILPKVGVYG-GYVLLDGIKKLCMINLGHNPSVQYQKRL 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE  I D+  ++Y Q   + +  +LR EI F   E+L   + +D+ +  K
Sbjct: 252 SLEVHILDYKGDLYDQTVRIYWLGFLRDEIHFSSKEELIQQLKKDQTEVIK 302


>gi|296125681|ref|YP_003632933.1| riboflavin biosynthesis protein RibF [Brachyspira murdochii DSM
           12563]
 gi|296017497|gb|ADG70734.1| riboflavin biosynthesis protein RibF [Brachyspira murdochii DSM
           12563]
          Length = 311

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 15/292 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  +V IG FD +H GH  +++  ++ A    +  ++       I + +  I+       
Sbjct: 15  KDSIVTIGKFDSVHKGHQKLIKYTVEYAKKHNLVSIAI-----VIKKKNLSIYNTEE--- 66

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
               ++ +G + +I   F  E     A++F  K L+E+  +K +  G  F FGKDR GD 
Sbjct: 67  NNSFIKALGINYIIVIDFLPEFYTMEAKEFFNK-LIEYYRMKHIAVGADFAFGKDRMGDS 125

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K  ++      FI  L N K   +SSSNIR AL+ G + +   +LG  +++   V+
Sbjct: 126 EFLKKYSKECSIGVSFIKFL-NYKGDKISSSNIREALSNGDMTSVNRMLGREYSMSGLVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           HG  +GR +G+PTAN+++   I + K GVY+   +  +  T Y  +   G +     N  
Sbjct: 185 HGNALGRKIGYPTANLEIPKTIFIPKMGVYSSTVKIGNGDTIYHALTFIGVSNI---NKE 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           L +ES + DFS+ IYG++ TV    Y+R  IK   I+++K  +  DEKK RK
Sbjct: 242 LRVESHLLDFSKMIYGKKITVVLLKYIRDNIKVNSIDEVKKLLENDEKKIRK 293


>gi|306831441|ref|ZP_07464599.1| riboflavin biosynthesis protein RibF [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325978348|ref|YP_004288064.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|304426226|gb|EFM29340.1| riboflavin biosynthesis protein RibF [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325178276|emb|CBZ48320.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 313

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 13/293 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FDG+H GH  + ++A +IA  +N  +TVL+FN  PR  +   +S  + +L+
Sbjct: 19  KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNESPRLALSRFTSDLLLSLT 78

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  + +   + G   L    FT   +  SA+ F++   ++ L  KT++ G  ++FG DR
Sbjct: 79  SPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLEN-YIKQLRAKTIVVGFDYKFGHDR 137

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                + Q+    +    V + E+++N  +I SS+ IR  + +G++     LLGY F+  
Sbjct: 138 KDAIDLAQQ----FNGDVVVVPEVQDNGEKI-SSTRIRQLIFEGNIKEVNRLLGYNFSTR 192

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+    ++ L  +GVY        + SY  + + G+N T   
Sbjct: 193 GIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVYVSDVIVNGK-SYRAMTSVGKNVTF-G 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
              L LE+ IFDF  EIYG+   + + D +R  +KF   ++L   +  D++ A
Sbjct: 251 GTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELIEQLKSDKEVA 303


>gi|163848499|ref|YP_001636543.1| riboflavin biosynthesis protein RibF [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526433|ref|YP_002570904.1| riboflavin biosynthesis protein RibF [Chloroflexus sp. Y-400-fl]
 gi|163669788|gb|ABY36154.1| riboflavin biosynthesis protein RibF [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450312|gb|ACM54578.1| riboflavin biosynthesis protein RibF [Chloroflexus sp. Y-400-fl]
          Length = 311

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%), Gaps = 10/297 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  ++   ++ A    +   VL++ PHPR ++Q   P+  LS  
Sbjct: 14  RATVLTIGRFDGVHLGHQQLIRTTVERARALDMLSAVLTWEPHPRAVLQPGQPLQLLS-- 71

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            + EKI  + ++    L+   FT    N +A +++ ++ V  + V+ +  G  F  G+ R
Sbjct: 72  DLDEKIEQIRRLEPDLLVIAPFTPAIRNLTAAEYMARI-VAAMPVREIWVGEDFAMGRGR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD   L + G + GF    + +        VSSS IR  +  G+V  A  LLG  F + 
Sbjct: 131 EGDIPRLMEIGRELGFAVGALSKY-TVAGIPVSSSRIRELVLAGNVAGAGALLGRPFALR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V  G+  GR +GFPTAN+Q+S D++L   GVYA R    D T    V N G  PT   
Sbjct: 190 GVVTRGDGRGRQIGFPTANVQVSSDVVLPANGVYACRAYLPDSTMVPAVTNIGVRPTFA- 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               ++E+ + D+  ++Y Q   +     LR E KF  ++ L   +  D  +AR IL
Sbjct: 249 GTQRVVEAHLLDWQGDLYDQPLRLELLIRLRNERKFNSVDDLVAQITSDVAEARAIL 305


>gi|50842952|ref|YP_056179.1| riboflavin biosynthesis protein RibF (riboflavin kinase)
           [Propionibacterium acnes KPA171202]
 gi|50840554|gb|AAT83221.1| riboflavin biosynthesis protein RibF (riboflavin kinase)
           [Propionibacterium acnes KPA171202]
          Length = 380

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 20/314 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 77  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 134

Query: 65  SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                  L   S++ +I  L+  G S +    FT E A+++   F+++VL   L+ + V+
Sbjct: 135 PDQAPALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVL 191

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  A
Sbjct: 192 VGQNFRFGRHAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEA 247

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS-- 239
           A LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA              
Sbjct: 248 AELLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRR 307

Query: 240 --GVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT   +G    +E+++ D    E+YG   TV+F + LR +IKF  IE L 
Sbjct: 308 LPSAISVGTNPTF--DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLI 365

Query: 296 IYMGEDEKKARKIL 309
             M +D + A+++L
Sbjct: 366 SQMADDVETAKRVL 379


>gi|269792598|ref|YP_003317502.1| riboflavin biosynthesis protein RibF [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100233|gb|ACZ19220.1| riboflavin biosynthesis protein RibF [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 333

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 150/309 (48%), Gaps = 15/309 (4%)

Query: 14  PNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           P  ++G    +  IG FDG HLGH  +L +A++ A    +   VLSF PHPR +I S  P
Sbjct: 5   PREMRGRRPMIWVIGYFDGFHLGHQALLREAMRAARERSVDWGVLSFTPHPRGVI-SGRP 63

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  L  P  +  +++ +G   L    F    A+ S  +F+Q +    L    V+ G  FR
Sbjct: 64  MELLFTPRERGVLVDFLGVPVLKELPFDRALADMSPLEFLQMMEAR-LSPTGVVVGGNFR 122

Query: 129 FGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FGK R+GD  +L+    + G  F +V   EL     + VSS+ IR  L  G   + + +L
Sbjct: 123 FGKGRSGDVDLLRDFCHRRGWFFKSVRCLEL---GGEPVSSTRIRETLVSGRAQDVSAML 179

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG 245
           GY F I   V  G++ GR +GFPTAN+ +    LL   GVY       D   +    N G
Sbjct: 180 GYPFMILGRVCRGDQRGRAIGFPTANLSIPHGKLLPARGVYGA-LAWVDGGWHPSALNVG 238

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT      + +E+ +  F  +IYG+   V     +R E KF  + +L   M  D ++A
Sbjct: 239 FNPTFEGVRGIRVEAHLMGFQGDIYGREMAVFPLKMIREEHKFPSVAQLVRQMEMDVEEA 298

Query: 306 RKILESSYP 314
           R+I    YP
Sbjct: 299 RRIC-LGYP 306


>gi|313763613|gb|EFS34977.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL013PA1]
 gi|313794008|gb|EFS42032.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA1]
 gi|313801394|gb|EFS42645.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA2]
 gi|313807926|gb|EFS46407.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA2]
 gi|313813336|gb|EFS51050.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL025PA1]
 gi|313816793|gb|EFS54507.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL059PA1]
 gi|313819712|gb|EFS57426.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL046PA2]
 gi|313822182|gb|EFS59896.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA1]
 gi|313823584|gb|EFS61298.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA2]
 gi|313825908|gb|EFS63622.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL063PA1]
 gi|313829588|gb|EFS67302.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL063PA2]
 gi|313839884|gb|EFS77598.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL086PA1]
 gi|314914768|gb|EFS78599.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA4]
 gi|314919270|gb|EFS83101.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA1]
 gi|314920819|gb|EFS84650.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA3]
 gi|314924671|gb|EFS88502.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA3]
 gi|314930498|gb|EFS94329.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL067PA1]
 gi|314954344|gb|EFS98750.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL027PA1]
 gi|314957471|gb|EFT01574.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA1]
 gi|314962059|gb|EFT06160.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA2]
 gi|314963638|gb|EFT07738.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL082PA1]
 gi|314968530|gb|EFT12628.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA1]
 gi|314978845|gb|EFT22939.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL072PA2]
 gi|314986496|gb|EFT30588.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA2]
 gi|314990855|gb|EFT34946.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA3]
 gi|315081281|gb|EFT53257.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL078PA1]
 gi|315083478|gb|EFT55454.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL027PA2]
 gi|315087165|gb|EFT59141.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA3]
 gi|315089335|gb|EFT61311.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL072PA1]
 gi|315099241|gb|EFT71217.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL059PA2]
 gi|315100452|gb|EFT72428.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL046PA1]
 gi|315106800|gb|EFT78776.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL030PA1]
 gi|315109040|gb|EFT81016.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL030PA2]
 gi|327329755|gb|EGE71511.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL096PA3]
 gi|327334273|gb|EGE75987.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL097PA1]
 gi|327446441|gb|EGE93095.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL013PA2]
 gi|327451971|gb|EGE98625.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL092PA1]
 gi|327454992|gb|EGF01647.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA3]
 gi|327457719|gb|EGF04374.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL083PA2]
 gi|328752196|gb|EGF65812.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL020PA1]
 gi|328755174|gb|EGF68790.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA1]
 gi|328758346|gb|EGF71962.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL025PA2]
 gi|332675903|gb|AEE72719.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes 266]
          Length = 336

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 20/314 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 33  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 90

Query: 65  SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                  L   S++ +I  L+  G S +    FT E A+++   F+++VL   L+ + V+
Sbjct: 91  PDQAPALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVL 147

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  A
Sbjct: 148 VGQNFRFGRHAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEA 203

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS-- 239
           A LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA              
Sbjct: 204 AELLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRR 263

Query: 240 --GVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT   +G    +E+++ D    E+YG   TV+F + LR +IKF  IE L 
Sbjct: 264 LPSAISVGTNPTF--DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLI 321

Query: 296 IYMGEDEKKARKIL 309
             M +D + A+++L
Sbjct: 322 SQMADDVETAKRVL 335


>gi|295131023|ref|YP_003581686.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK137]
 gi|291375415|gb|ADD99269.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK137]
 gi|313773550|gb|EFS39516.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL074PA1]
 gi|313811603|gb|EFS49317.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL083PA1]
 gi|313831345|gb|EFS69059.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL007PA1]
 gi|313834955|gb|EFS72669.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL056PA1]
 gi|314974220|gb|EFT18316.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL053PA1]
 gi|314976670|gb|EFT20765.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL045PA1]
 gi|314984309|gb|EFT28401.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA1]
 gi|315095359|gb|EFT67335.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL038PA1]
 gi|327328378|gb|EGE70140.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL096PA2]
 gi|327444163|gb|EGE90817.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL043PA2]
 gi|327444956|gb|EGE91610.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL043PA1]
 gi|328760036|gb|EGF73616.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL099PA1]
          Length = 340

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 20/314 (6%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 37  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 94

Query: 65  SSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                  L   S++ +I  L+  G S +    FT E A+++   F+++VL   L+ + V+
Sbjct: 95  PDQAPALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVL 151

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  A
Sbjct: 152 VGQNFRFGRHAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEA 207

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS-- 239
           A LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA              
Sbjct: 208 AELLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRR 267

Query: 240 --GVANFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT   +G    +E+++ D    E+YG   TV+F + LR +IKF  IE L 
Sbjct: 268 LPSAISVGTNPTF--DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLI 325

Query: 296 IYMGEDEKKARKIL 309
             M +D + A+++L
Sbjct: 326 SQMADDVETAKRVL 339


>gi|262068108|ref|ZP_06027720.1| riboflavin biosynthesis protein RibF [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378196|gb|EFE85714.1| riboflavin biosynthesis protein RibF [Fusobacterium periodonticum
           ATCC 33693]
          Length = 316

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + IK A  N+    V +F  HP   +        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFPERKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K       Y+  +F+ K+L + L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDIVIMQKLDKNFLEYTPLEFV-KILKDKLKVKEIFVGFNFSFGKGGTGTAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + ++EL       ++VSSS IR  +       A  LL +   +  +VI
Sbjct: 138 LEYLAE---VHNIKVNELPPVTLDGELVSSSAIRKKIANSDFDGAVKLLDHPMIVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE+ I DF +E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 MSLEAHILDFDREVYGEKLYIQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|306820443|ref|ZP_07454079.1| riboflavin biosynthesis protein RibF [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551518|gb|EFM39473.1| riboflavin biosynthesis protein RibF [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 310

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 160/316 (50%), Gaps = 19/316 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++ N E+ +          + IG+FDG+H GH  ++++ I++A N      +      
Sbjct: 5   MKIYENFEVEKKYKRS-----ITIGDFDGLHKGHMPLIKKTIEMAKNKGYVSCALTFRFN 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           T   S++ +  L     + ++ +K G   L   +F  E  N +   FI K+LV+ L VK 
Sbjct: 60  TANLSNNKVKYLCDIDEKIELFKKSGIEELFIIEFCNEIKNTNVYDFISKILVDKLNVKY 119

Query: 121 VITGTKFRFGKDRAGDRGILQ----KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           ++ G   + G DR    GI +       + Y    + ID +R      V+SS+IR+ +  
Sbjct: 120 LLLGDDAKLGSDRLDIHGIEEVCKICNVDFYSISQIQIDNIR------VTSSHIRSLIAD 173

Query: 177 GHV-LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
           G V  N    LG  +    +V+HG  +G  LGFPTAN+ L+  ++L K GVY      + 
Sbjct: 174 GVVDENLTKFLGRDYCFSGEVVHGNGLGVKLGFPTANIMLNSSLVLPKFGVYYAICEIEG 233

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y    N G  PT V N  L LE+FIFDF+++IYG++  +    ++R E KFK++++L
Sbjct: 234 K-RYDCAINIGDKPT-VDNNYLGLEAFIFDFNEDIYGKKIKIYLKKFIRKEEKFKNLDEL 291

Query: 295 KIYMGEDEKKARKILE 310
              M +D +  RK+++
Sbjct: 292 INQMKKDVEDIRKLMK 307


>gi|329577069|gb|EGG58542.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1467]
          Length = 316

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 159/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   +     GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRFSRIGVYAVQIEVGS 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|284048688|ref|YP_003399027.1| riboflavin biosynthesis protein RibF [Acidaminococcus fermentans
           DSM 20731]
 gi|283952909|gb|ADB47712.1| riboflavin biosynthesis protein RibF [Acidaminococcus fermentans
           DSM 20731]
          Length = 313

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 152/303 (50%), Gaps = 19/303 (6%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS 73
           HL     A+G FDG+H GH  ++      A      + V +F+ HP   + S  P   L 
Sbjct: 14  HLLPSAAALGTFDGVHRGHQEVIGTTRTYARQHHLQLMVFTFSTHP---LASLKP--ELE 68

Query: 74  PPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           PP +     +EK++  +    L+   FT E A  SA+ F+Q +LV+ L VK V  G  F 
Sbjct: 69  PPRLLDNAAKEKLMVDLEVDILVNIPFTRELAAMSADDFLQ-MLVD-LGVKAVGIGDNFS 126

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG    G+  +L+    ++G  T+    L      +VSS+NIR A+ +G V  AA +LG 
Sbjct: 127 FGAGGKGNVRLLKTEHTRFGL-TILSRPLLKQDGLVVSSTNIRKAIAEGRVELAAQMLGR 185

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGR 246
            + I   V+ G+  GR LGFPTAN++L      +   GVYA R     Q  +  + N G 
Sbjct: 186 PYAIRGQVVPGDHRGRLLGFPTANLKLLGQHFAVPAFGVYAGRVLVDGQW-HDAMVNVGD 244

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT   N    LE+ +F F  ++YG+   V     LR E KF D+++L+  + +D + A+
Sbjct: 245 NPTFA-NQETRLEAHLFRFQGDLYGKEVRVQLVARLRGEEKFPDLDRLQEQLRKDARNAQ 303

Query: 307 KIL 309
            IL
Sbjct: 304 SIL 306


>gi|297584085|ref|YP_003699865.1| riboflavin biosynthesis protein RibF [Bacillus selenitireducens
           MLS10]
 gi|297142542|gb|ADH99299.1| riboflavin biosynthesis protein RibF [Bacillus selenitireducens
           MLS10]
          Length = 317

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 153/283 (54%), Gaps = 15/283 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G FDG+H GH  ++E A + A    +   V++F PHP+ +++  +        +I++
Sbjct: 20  VALGFFDGVHKGHQKVIEMAKEKAGELGVKSGVMTFYPHPKEVLRPETAKEVKYLSAIED 79

Query: 80  KILEKMGFSA---LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           K  E +GFS    LI  +F    A+ S +QF+ + L+    +  V+ G  + +G+   G 
Sbjct: 80  K-AELIGFSGVDYLIIVEFDPRFADLSPQQFVDQYLIGQ-NIVHVVAGFDYTYGRMGKGT 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L          T+ + ++ + K +I SS++IRTAL KG +      LG  +T+  +V
Sbjct: 138 METLPFHSRGMLTQTI-VKKVASTKEKI-SSTSIRTALVKGDIRKVNDYLGRLYTLSGNV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQ-DQTSYSGVANFGRNPTM---V 251
            HGEK GRT+GFPTAN+ +    L    GVYA+    + D   Y+G+ N G  PT     
Sbjct: 196 EHGEKRGRTIGFPTANVSVDDKTLTPAPGVYAVTANVEGDSFEYTGICNIGFKPTFHDEK 255

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           P+ P +LE  +FDFS+ IY    TV F D++R E+KF  +++L
Sbjct: 256 PDAP-VLEIHLFDFSKTIYDTHITVYFHDFVRGEVKFSGVDEL 297


>gi|228470195|ref|ZP_04055102.1| riboflavin biosynthesis protein RibF [Porphyromonas uenonis 60-3]
 gi|228308146|gb|EEK17009.1| riboflavin biosynthesis protein RibF [Porphyromonas uenonis 60-3]
          Length = 304

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 153/303 (50%), Gaps = 14/303 (4%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+HLGH  ++ Q + IA    +T  V++F+PHP+ ++    P   ++    +E +
Sbjct: 1   MGAFDGVHLGHQALIRQVLTIAERDHLTSGVVTFDPHPQLVLHPERPFRLITLEREKELL 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L +MG   +    FT+  +  SAE+F++  L E L + T++ G    FG D+  D    Q
Sbjct: 61  LHQMGIERVAVIPFTVSLSQMSAEEFLRTYLDEQLHIHTLVVGFDHHFGHDKGLDFADYQ 120

Query: 142 KRGEKYGFHTVFIDE--LRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + YG   +  +   L ++ SQ  +SS+ IR  +  G V  A   LG+ +TI   V  
Sbjct: 121 AIAQHYGIRCIRGEAYTLGDSTSQDPISSTAIRRWIDTGAVTEAERQLGHPYTILGKVKT 180

Query: 199 GEKIGRTLGFPTANMQL-SP-DILLKEGVYAIR-----FRTQDQTSYSGVANFGRNPTM- 250
           G +IGR LG+PTAN+++ SP   L   GVY  R     F    Q     +   G  PT+ 
Sbjct: 181 GLQIGRKLGYPTANIEVPSPYKALPPAGVYMARTTIDPFGATQQRDIPSMLYIGTRPTLE 240

Query: 251 VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +     ++E F+    +  +YGQ   +S  D LR E+ F+ ++ L+  +  DE+  R+  
Sbjct: 241 LAKEETMIEVFLMGGEEYHLYGQELQISLCDRLRQELHFESLDALRKQITRDEEAVRRYF 300

Query: 310 ESS 312
           + S
Sbjct: 301 QLS 303


>gi|311068190|ref|YP_003973113.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           atrophaeus 1942]
 gi|310868707|gb|ADP32182.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           atrophaeus 1942]
          Length = 318

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 18/295 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII-QSSSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++  A  IA      + V++F+PHP  ++ +   P   ++P  +
Sbjct: 21  VMALGYFDGVHLGHQKVIGTAKAIAEEKGLALAVMTFHPHPSHVLGREREPKDLITP--L 78

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           ++KI  +E++G   L   KF    A+ + EQF  + +V  L V+  + G  F +GK   G
Sbjct: 79  EDKISQIEQLGTDVLYVVKFNEAFASLTPEQFADQYIV-GLNVQHAVAGFDFTYGKYGKG 137

Query: 136 DRGI--LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L   G+        +++L     +I SSS IRTAL  G V  A  LLG  + I+
Sbjct: 138 TMASMPLDLNGQA---DCTTVEKLTEQDKKI-SSSFIRTALQNGDVELAGVLLGQPYFIK 193

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             +IHG+K GRT+GFPTAN+ L+   I+   GVYA++        Y GV N G  PT   
Sbjct: 194 GIIIHGDKRGRTIGFPTANVGLNNTYIVPPTGVYAVQAEINGNV-YQGVCNIGYKPTFYE 252

Query: 253 NGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             P    +E  +FDF QE+YG+   + ++  +R E KF  I +L   + +D+++A
Sbjct: 253 KRPEQPSIEVHLFDFDQEVYGESIKIKWYKRIRSERKFSGIAELTEQIEKDKQEA 307


>gi|169827172|ref|YP_001697330.1| riboflavin biosynthesis protein ribC [Lysinibacillus sphaericus
           C3-41]
 gi|168991660|gb|ACA39200.1| Riboflavin biosynthesis protein ribC [Lysinibacillus sphaericus
           C3-41]
          Length = 316

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 152/291 (52%), Gaps = 12/291 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSIQ 78
           +A+G FDG+H GH  +++ A +       P  V++F+PHP  ++   +  +F ++    +
Sbjct: 23  LALGFFDGVHRGHQAVIKAAKEEGEKRQIPSAVMTFDPHPSLVLGGRNEKVFYITLLQQK 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++ E+ G   +    FT + A  S   FI    +  L ++ V  G  + FG   A  +G
Sbjct: 83  LQLFEEQGVDTVFVVHFTSDFAKLSPAAFID-TFIRGLNIQHVTAGFDYSFG---AFGKG 138

Query: 139 ILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +   R    G + V I E + +  + +SS+ IR  L +G +  A  LLG  F I   V+
Sbjct: 139 TMDDMRALSNGDYGVTIVEKKTDDVEKISSTRIRQLLQEGDMEAARTLLGRPFEINGMVV 198

Query: 198 HGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGP 255
           HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+   Y GV N G  PT   PN  
Sbjct: 199 HGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN-AWYDGVCNVGYKPTFKDPNDK 257

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E  I +F + IYG+   V+++  +R E KF  I+ LK  + +D+++A
Sbjct: 258 QLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGIDALKTQIEKDKQEA 308


>gi|254247427|ref|ZP_04940748.1| FAD synthase [Burkholderia cenocepacia PC184]
 gi|124872203|gb|EAY63919.1| FAD synthase [Burkholderia cenocepacia PC184]
          Length = 330

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 151/309 (48%), Gaps = 14/309 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ S + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++        
Sbjct: 176 DLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRA 295

Query: 298 MGEDEKKAR 306
           +  D   AR
Sbjct: 296 IALDVANAR 304


>gi|167945703|ref|ZP_02532777.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 263

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +F P PR      +    L+    + + + + G   ++  +F  + +   A +F+ ++L+
Sbjct: 1   TFEPQPREFFTPGAAPARLTRLREKLQAMYEAGIERVVILEFNRKFSVMPAREFVIELLI 60

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L V+ +  G  FRFG  RAGD  +LQ  G ++GF    ++  + +  + VSS+ IR  
Sbjct: 61  QGLGVRFLSVGDDFRFGLGRAGDFHLLQAMGSEHGFEVENMNTFKLDADR-VSSTRIREL 119

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L++G +  AA  LG  + I   V HG+K GRT+GFPT N+ L   +    GV+A+R    
Sbjct: 120 LSRGDLDRAAACLGRPYRICGRVAHGDKRGRTIGFPTMNVDLHRHVSPLRGVFAVRVHGL 179

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +    GVAN G  PT+  +   LLE  +FDF++ +YG+   V F   LR E KF   E+
Sbjct: 180 AEGVLPGVANIGTRPTVCGDPRYLLEVHLFDFNRVVYGEHLQVEFVHKLRDEKKFGSFEE 239

Query: 294 LKIYMGEDEKKARKIL 309
           L+  + ED +  R+ L
Sbjct: 240 LRAQILEDARLGREWL 255


>gi|255284458|ref|ZP_05349013.1| riboflavin biosynthesis protein RibF [Bryantella formatexigens DSM
           14469]
 gi|255265003|gb|EET58208.1| riboflavin biosynthesis protein RibF [Bryantella formatexigens DSM
           14469]
          Length = 317

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 155/310 (50%), Gaps = 27/310 (8%)

Query: 21  VVAIGNFDGIHLGHH-LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V +G FDG+H GH  L+     K A       ++  P+P+      +P   L     ++
Sbjct: 17  AVTLGKFDGLHRGHQELVRRICAKKAQGLESAAVTIWPNPK------AP--ALLTKGEKK 68

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L+++G    I   F  + ++   E+F++++L + L  K +  G+ FRFG  R GD  +
Sbjct: 69  ALLKRLGVQWWIDCPFLPQISHMEPEEFVREILTKRLRAKYIAVGSDFRFGYQRRGDCAL 128

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L +   + G+    + +    + +I SSS ++ AL +G +    +LLGY +T++ +V+HG
Sbjct: 129 LLQMQAECGYELEVVPKECYGEREI-SSSYVKEALERGDMELVNNLLGYPYTVQGEVLHG 187

Query: 200 EKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQT-----------SYSGVANFGRN 247
            +IGRTLG PT N+  S   LL   GVYA R   Q Q            +  G+ N G  
Sbjct: 188 RRIGRTLGMPTTNIIPSVGKLLPPNGVYASRTVIQPQAYGTEAAEEEPETLCGITNIGYK 247

Query: 248 PTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           PT+   G     +E+++FD+  ++YG+   V    Y RPE KF D+E LK  M  D +  
Sbjct: 248 PTV---GEYFRGVETYLFDYEGDLYGRMIEVQLHAYERPEQKFPDMESLKAQMQRDIEFG 304

Query: 306 RKILESSYPL 315
           ++     +P+
Sbjct: 305 KEYFSERFPI 314


>gi|306794276|ref|ZP_07432578.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu005]
 gi|308369856|ref|ZP_07419306.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu002]
 gi|308372390|ref|ZP_07428514.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu004]
 gi|308326222|gb|EFP15073.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu002]
 gi|308333385|gb|EFP22236.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu004]
 gi|308337409|gb|EFP26260.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu005]
          Length = 324

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 159/318 (50%), Gaps = 21/318 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S   
Sbjct: 10  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G ++ A   LG
Sbjct: 130 KKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS------- 237
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 190 RPHRVEGVVVRGEGRGAELGFPTAN--VAPPMYSAIPADGVYATWFTVLGHGPVTGTVVP 247

Query: 238 ---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF+ + +L
Sbjct: 248 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQL 306

Query: 295 KIYMGEDEKKARKILESS 312
              MG D ++AR +L + 
Sbjct: 307 VAAMGADTERARDLLSTG 324


>gi|149196216|ref|ZP_01873271.1| riboflavin biosynthesis protein RibF [Lentisphaera araneosa
           HTCC2155]
 gi|149140477|gb|EDM28875.1| riboflavin biosynthesis protein RibF [Lentisphaera araneosa
           HTCC2155]
          Length = 308

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 154/306 (50%), Gaps = 12/306 (3%)

Query: 11  QSLPNHLKGGV-VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS 67
           Q L NH    V +A GNFDGIH GH  +L++AI     NNS   VLSF+PHPR    +  
Sbjct: 8   QELQNHGINDVSIACGNFDGIHRGHRKLLQKAIDQGKENNSTPVVLSFSPHPREFF-TGQ 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE-WLEVKTVITGTK 126
            I TLS    + K  E +G  AL+   F    A      FI+  L+E  + +     G +
Sbjct: 67  CIPTLSSLERRLKTFESLGIKALVILPFNKGLAETPPRDFIKNHLLESGINLTDFCVGRE 126

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           + FG DR GD  +LQ+  + +  H V  DE   +  + VSSS IR AL +     A  LL
Sbjct: 127 WLFGADRKGDINLLQEYSDHFTTHPV--DEYLLD-GEAVSSSRIRKALEEHKFAEAERLL 183

Query: 187 GYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
            +++ +   V+ G  +    L  PTAN+     +L   GV+A+  +  D+  Y+G+ N G
Sbjct: 184 SHKWYLSGKVVKGLGLASEKLKTPTANIDTGIPLLPISGVFAVHAKI-DRQVYTGILNIG 242

Query: 246 RNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             PT +        +E  IFDFS E+Y +  ++    ++R E KF   ++LK  +  D  
Sbjct: 243 SAPTFLEKQQHNQHVELHIFDFSGELYDKEVSIHIHRFIRDEKKFDSPDELKKQIQHDIA 302

Query: 304 KARKIL 309
           +AR+IL
Sbjct: 303 QARQIL 308


>gi|168698908|ref|ZP_02731185.1| probable riboflavin kinase (FAD synthetase) [Gemmata obscuriglobus
           UQM 2246]
          Length = 312

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 5/311 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII 63
           +++ ++  P    GG V +GNFDG+H GH  ++  A + A+    P  V++F   P  ++
Sbjct: 5   HLDWSEYPPPEFTGGAVTVGNFDGVHRGHQALVAAAREQADRVRGPAVVVTFGTPPHQVL 64

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              S    L+  + + ++L   G   ++  +        S E F + V+   L  + V+ 
Sbjct: 65  HPGSERPPLTTIARRAELLHAAGADHVVVLRTGPALLALSPEAFFEDVIARQLGARAVVE 124

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG+ RAG    L+      G     + ++     + VSSS +R AL  G V  AA
Sbjct: 125 GYDFRFGRGRAGTNETLRALCAGAGLAFAELAQV-AFAGEPVSSSRVRGALVGGDVARAA 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   + I   V+ G + GRT+GFPTAN+     +L   GVYA+R    +   +   AN
Sbjct: 184 ELLARPYRIAGTVVTGARRGRTIGFPTANLGDVATLLPGNGVYAVRALV-NGVPHPAAAN 242

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT   +    +E  +  F+ ++YGQ  TV F   LR    F    +L   +  D +
Sbjct: 243 VGPNPTFGEDA-RKIEVHLIGFAGDLYGQELTVEFVSRLRETRPFGGAAELVEQLKRDIE 301

Query: 304 KARKILESSYP 314
            A ++L  S P
Sbjct: 302 HATRVLGVSQP 312


>gi|34540709|ref|NP_905188.1| riboflavin biosynthesis protein RibF [Porphyromonas gingivalis W83]
 gi|34397023|gb|AAQ66087.1| riboflavin biosynthesis protein RibF [Porphyromonas gingivalis W83]
          Length = 323

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 18/298 (6%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG FDGIH GH  +L+Q  K+A     P  V++F+  P ++++  +P   L+  +I EK+
Sbjct: 27  IGTFDGIHFGHRFLLDQLKKMAKEKHLPTMVITFDVPPISVVRPGTPYQKLT--TIGEKL 84

Query: 82  L--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L  E  G    +   FT E    +A+ FI  +L + L VK ++ G   RFG  R      
Sbjct: 85  LRLEAEGVDYTVVLPFTPELVAMTADTFITTILHKRLHVKALLIGYDHRFGHGRISGLEE 144

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            ++     G     I   + ++++I     SSS +R AL   ++  A  LLGY + +   
Sbjct: 145 YKQIATPLG-----ITVKKASQAEIGGVPASSSAVRQALIDNNLALANQLLGYDYILTGK 199

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V HG +IGR LGFPTAN+ +S    ++  +GVYA+R     +  Y+G+   GR PT+   
Sbjct: 200 VEHGFRIGRELGFPTANLTVSDSHKLIPCDGVYAVRAIVSGE-RYNGMLYIGRRPTLNNG 258

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +E  +F+F + IYG +  V F  ++R ++KF  +E L+  +  D  +   + ES
Sbjct: 259 DQRTIEVNLFEFDKTIYGSQIRVEFVSFIREDMKFDSLEALRQQIQADYGRISALFES 316


>gi|269958476|ref|YP_003328263.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
 gi|269848305|gb|ACZ48949.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
          Length = 303

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 5/283 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDGIHLGH  I  +  + A   + P  VL+F+PH    ++     F L     + 
Sbjct: 15  LTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPHTAAFLRQRKN-FLLVDFEHKV 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E  G   L   +F  E A  S + FI  VLV   + + V+ G    FG   AG+   
Sbjct: 74  ELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKARHVVVGKDCVFGHKCAGNLKS 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G+    + +   +  +  SSS IR  L  G +  A  LLG R  +   V+ G
Sbjct: 134 LELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGDIETANLLLGRRHVVSGRVLKG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              G+ +GFPT N+ +   +L K GVY  R R      +  GV N G  PT       LL
Sbjct: 193 RGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYWLPGVVNIGTRPTFAEEICPLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E  +FDF  ++YG+   V    +LRPE KF ++++L   + +D
Sbjct: 253 EMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQIAQD 295


>gi|58617579|ref|YP_196778.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Gardel]
 gi|58417191|emb|CAI28304.1| Riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Gardel]
          Length = 306

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDG+HLGH  I++    IA   N    V++F PHP   +++    F L     + 
Sbjct: 18  ITFGNFDGVHLGHKAIIDTIRDIATKENLASAVVTFEPHPSVYLRNKRG-FLLLDFDQKI 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE +G   L    F    +  S E FI+ VLV    +K VI G    FG + +G+  +
Sbjct: 77  KLLESLGIDYLYVINFDKNFSQLSPEVFIKDVLVNNYGMKHVIVGHNCSFGCECSGNIDL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L      Y +    +D L  + + + SSS IR +L+ G +  A  +LG  + I   VI G
Sbjct: 137 LYYYSIIYDYKVKKLDPLFVD-NILCSSSVIRESLSNGKIKLANKILGRPYQINGKVIKG 195

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              GR +GFPT N+ +   ++ K GVYA      +  ++  G+ N G  PT       +L
Sbjct: 196 FVRGRVIGFPTVNINIGHVLVPKFGVYAASIEINNSNTWLHGIVNIGLRPTFNDIVFPIL 255

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  IFDF+ +IY Q   +   +++RPE KF  +++LK  +  D    ++IL
Sbjct: 256 EMHIFDFNNDIYDQYVAIRLLEFIRPECKFDSVDQLKQQINIDIVTVKQIL 306


>gi|223984484|ref|ZP_03634617.1| hypothetical protein HOLDEFILI_01911 [Holdemania filiformis DSM
           12042]
 gi|223963555|gb|EEF67934.1| hypothetical protein HOLDEFILI_01911 [Holdemania filiformis DSM
           12042]
          Length = 318

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+H GH  ++++ I+ A  +     +++F+P P   I     +  L+    +
Sbjct: 25  CACIGYFDGLHRGHRALIDETIRRAKAAGCESALITFSPDPWITIGRMQKVQHLTTLQQR 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++  KMG   +I   F  E A  S  +FI  +L E   +K +I G  F +GK  +G   
Sbjct: 85  IELAGKMGIDRVIVLDFVKEMAELSPSEFID-MLAEHCRLKALICGFDFHYGKFGSGSVE 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L  + E  G   V + E  N++   +SSS I   L +G V  A  LLGY + I   V+H
Sbjct: 144 TL--KAEAAGRFDVVVIEAVNDQGDKISSSRISRCLEQGDVAEAGRLLGYPYEIRGVVVH 201

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GR  GFPTAN++   + LL   GVYA    +  + S+  + N G NPT  P   L 
Sbjct: 202 GRQKGREWGFPTANLKTEEETLLPLGGVYAGEAESGGR-SWKAMINIGHNPTCNPVRELS 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +E+ + D +++ Y Q   + F+  LR E +F  +++L   +  D++  R
Sbjct: 261 VEANLLDCAEDFYDQPMRLRFYKRLRTERQFASLQELIEQLHRDQQAVR 309


>gi|57239540|ref|YP_180676.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579525|ref|YP_197737.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161619|emb|CAH58547.1| riboflavin kinase/FAD synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418151|emb|CAI27355.1| Riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 306

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDG+HLGH  I++    IA   N    V++F PHP   +++    F L     + 
Sbjct: 18  ITFGNFDGVHLGHKAIIDTIRNIATKENLASAVVTFEPHPSVYLRNKHG-FLLLDFDQKI 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE +G   L    F    +  S E FI+ VLV    +K VI G    FG + +G+  +
Sbjct: 77  KLLESLGIDYLYVINFDKNFSQLSPEVFIKDVLVNNCGMKHVIVGHNCSFGCECSGNIDL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L      Y +    +D L   ++ + SSS IR +L+ G +  A  +LG  + +   VI G
Sbjct: 137 LYYYSIIYDYKVKKLDPLFV-ENILCSSSVIRESLSNGKIKLANKILGRPYQVNGKVIKG 195

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              GR +GFPT N+ +   ++ K GVYA      +  ++  G+ N G  PT       +L
Sbjct: 196 FVRGRVIGFPTVNINIGHVLVPKFGVYAASIEINNSNTWLHGIVNIGLRPTFNDIVFPIL 255

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  IFDF+ +IY Q   +   +++RPE KF  +++LK  +  D    ++IL
Sbjct: 256 EMHIFDFNNDIYDQYVAIRLLEFIRPECKFDSVDQLKQQINIDIVTVKQIL 306


>gi|15609923|ref|NP_217302.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Rv]
 gi|15842324|ref|NP_337361.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis CDC1551]
 gi|31793962|ref|NP_856455.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium bovis AF2122/97]
 gi|121638666|ref|YP_978890.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662628|ref|YP_001284151.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Ra]
 gi|148823974|ref|YP_001288728.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis F11]
 gi|167968616|ref|ZP_02550893.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Ra]
 gi|215404756|ref|ZP_03416937.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 02_1987]
 gi|215412599|ref|ZP_03421327.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428218|ref|ZP_03426137.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T92]
 gi|215431726|ref|ZP_03429645.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|215447038|ref|ZP_03433790.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T85]
 gi|218754527|ref|ZP_03533323.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis GM 1503]
 gi|224991158|ref|YP_002645847.1| riboflavin kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798130|ref|YP_003031131.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232884|ref|ZP_04926211.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis C]
 gi|254365437|ref|ZP_04981482.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551845|ref|ZP_05142292.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260187803|ref|ZP_05765277.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis CPHL_A]
 gi|260201914|ref|ZP_05769405.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T46]
 gi|260206098|ref|ZP_05773589.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis K85]
 gi|289444331|ref|ZP_06434075.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           T46]
 gi|289448444|ref|ZP_06438188.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553427|ref|ZP_06442637.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 605]
 gi|289575484|ref|ZP_06455711.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis K85]
 gi|289746589|ref|ZP_06505967.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           02_1987]
 gi|289751443|ref|ZP_06510821.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T92]
 gi|289754892|ref|ZP_06514270.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|289758913|ref|ZP_06518291.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis T85]
 gi|289762958|ref|ZP_06522336.1| riboflavin kinase/FMN adenylyltransferase [Mycobacterium
           tuberculosis GM 1503]
 gi|297635397|ref|ZP_06953177.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN 4207]
 gi|297732395|ref|ZP_06961513.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN R506]
 gi|298526252|ref|ZP_07013661.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|313659727|ref|ZP_07816607.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN V2475]
 gi|2624308|emb|CAA15581.1| PROBABLE BIFUNCTIONAL FAD SYNTHETASE/RIBOFLAVIN BIOSYNTHESIS
           PROTEIN RIBF: RIBOFLAVIN KINASE (FLAVOKINASE) + FMN
           ADENYLYLTRANSFERASE (FAD PYROPHOSPHORYLASE) (FAD
           SYNTHETASE)(FAD DIPHOSPHORYLASE) (FLAVIN ADENINE
           DINUCLEOTUDE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|13882620|gb|AAK47175.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           CDC1551]
 gi|31619556|emb|CAD94994.1| PROBABLE BIFUNCTIONAL FAD SYNTHETASE/RIBOFLAVIN BIOSYNTHESIS
           PROTEIN RIBF: RIBOFLAVIN KINASE (FLAVOKINASE) + FMN
           ADENYLYLTRANSFERASE (FAD PYROPHOSPHORYLASE) (FAD
           SYNTHETASE)(FAD DIPHOSPHORYLASE) (FLAVIN ADENINE
           DINUCLEOTUDE SYNTHETASE) [Mycobacterium bovis AF2122/97]
 gi|121494314|emb|CAL72792.1| Probable bifunctional FAD synthetase/riboflavin Biosynthesis
           protein ribF: riboflavin kinase + FMN
           adenylyltransferase [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601943|gb|EAY60953.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis C]
 gi|134150950|gb|EBA42995.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506780|gb|ABQ74589.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           H37Ra]
 gi|148722501|gb|ABR07126.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF:
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis F11]
 gi|224774273|dbj|BAH27079.1| riboflavin kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319633|gb|ACT24236.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417250|gb|EFD14490.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           T46]
 gi|289421402|gb|EFD18603.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438059|gb|EFD20552.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 605]
 gi|289539915|gb|EFD44493.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis K85]
 gi|289687117|gb|EFD54605.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           02_1987]
 gi|289692030|gb|EFD59459.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T92]
 gi|289695479|gb|EFD62908.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|289710464|gb|EFD74480.1| riboflavin kinase/FMN adenylyltransferase [Mycobacterium
           tuberculosis GM 1503]
 gi|289714477|gb|EFD78489.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis T85]
 gi|298496046|gb|EFI31340.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|326904401|gb|EGE51334.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis W-148]
 gi|328457903|gb|AEB03326.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 4207]
          Length = 331

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 159/318 (50%), Gaps = 21/318 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S   
Sbjct: 17  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPA 76

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  V+ G  F FG
Sbjct: 77  QLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFG 136

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G ++ A   LG
Sbjct: 137 KKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALG 196

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQ--------- 235
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 197 RPHRVEGVVVRGEGRGAELGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVP 254

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF+ + +L
Sbjct: 255 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQL 313

Query: 295 KIYMGEDEKKARKILESS 312
              MG D ++AR +L + 
Sbjct: 314 VAAMGADTERARDLLSTG 331


>gi|313897512|ref|ZP_07831055.1| riboflavin biosynthesis protein RibF [Clostridium sp. HGF2]
 gi|312957882|gb|EFR39507.1| riboflavin biosynthesis protein RibF [Clostridium sp. HGF2]
          Length = 314

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 145/293 (49%), Gaps = 9/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+HLGH  ++E+  ++A   N+   +++F+P P  +I+    I  ++P   +
Sbjct: 19  TACIGYFDGLHLGHQKLIEEVKRVAARRNTRCALITFDPDPWCVIRGLQDIAHITPMKQR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I E MG    I   F+ E A+ + + F +KVL   L + T++ G  F +G+   GD  
Sbjct: 79  MRIAEAMGIEYWIILDFSREMADLTPQDFHEKVLKP-LRLDTLVCGYDFHYGRKGEGD-- 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             Q   E+  F    ID++ +   +I SSS I   + +G +  AA  +G  + +E  V  
Sbjct: 136 -AQSLHEQTDFDVHVIDQVSSEHRKI-SSSRIEELIQEGDMEKAARFMGRWYDMEGSVKG 193

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G  +GR  GFPTAN++L    ++ K+GVY    +    T +  + N G NPT        
Sbjct: 194 GSHVGRKNGFPTANLRLQELYVMPKKGVYVGAVKVLG-TWHRAMMNVGNNPTYNYQEAGS 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E+ + DF Q+IY +     F  Y+R E KF D   L   + +D    R   E
Sbjct: 253 IEAHLLDFDQDIYEEPVIFRFLSYIREERKFPDARALGEQLKKDLATTRSYFE 305


>gi|238852624|ref|ZP_04643034.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri 202-4]
 gi|238834770|gb|EEQ26997.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri 202-4]
          Length = 312

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 158/290 (54%), Gaps = 7/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ +G FDG+H+GH  +++ A  IA     P+ V++F+ HP+ I ++      L     +
Sbjct: 20  ILTLGFFDGVHIGHQKLIKDAKLIAKEKKLPLMVMTFDKHPKEIYKNDHKFVYLETAREK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E+ +EK+G   L+  KFT + +    + F+ +V+++ L+  TV+ G  + +G     +  
Sbjct: 80  EQKMEKLGVDYLVIIKFTKKFSQLKPQDFVDQVIMK-LKADTVVVGFDYTYGPKDIANVE 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K  +  G   + ++  ++     V S+ IR A+  G+V  AA LLG  +     ++H
Sbjct: 139 NLPKFAQ--GRFQIMVEPKQSIDKIKVGSTYIREAIQHGNVELAAALLGQPYETSGIIVH 196

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + G  +GFPTAN+++S   +L  EGVYA R +   +  +  + + G N T   N  L 
Sbjct: 197 GFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKINGKW-HDAMTSVGYNETFKTNHGLT 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 256 IETNIFNFDEEAYGKPLTLAWYKFIRSNKKFSGIEELSRQLDQDKRNIKQ 305


>gi|188994856|ref|YP_001929108.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
 gi|188594536|dbj|BAG33511.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
          Length = 323

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 18/298 (6%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG FDGIH GH  +L+Q  K+A     P  V++F+  P ++++  +P   L+  +I EK+
Sbjct: 27  IGTFDGIHFGHRFLLDQLKKMAKEKHLPTMVITFDVPPISVVRPGTPYQKLT--TIGEKL 84

Query: 82  L--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L  E  G    +   FT E    +A+ FI  +L + L VK ++ G   RFG  R      
Sbjct: 85  LRLETEGVDYTVVLPFTPELVAMTADTFITTILHKRLHVKALLIGYDHRFGHGRISGLEE 144

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            ++     G     I   + ++++I     SSS +R AL   ++  A  LLGY + +   
Sbjct: 145 YKQIATPLG-----ITVKKASQAEIGGVPASSSVVRQALIDNNLALANQLLGYDYILTGK 199

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V HG +IGR LGFPTAN+ +S    ++  +GVYA+R     +  Y+G+   GR PT+   
Sbjct: 200 VEHGFRIGRELGFPTANLTVSDSHKLIPCDGVYAVRAIVSSE-RYNGMLYIGRRPTLNNG 258

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +E  +F+F + IYG +  V F  ++R ++KF  +E L+  +  D  +   + ES
Sbjct: 259 DQRTIEVNLFEFDKTIYGSQIRVEFVSFIREDMKFDSLEALRQQIQADYGRISALFES 316


>gi|282877086|ref|ZP_06285928.1| riboflavin biosynthesis protein RibF [Prevotella buccalis ATCC
           35310]
 gi|281300768|gb|EFA93095.1| riboflavin biosynthesis protein RibF [Prevotella buccalis ATCC
           35310]
          Length = 321

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 10/292 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++ Q +K A ++ ++  V++F+ HPR ++ S      L+    +
Sbjct: 22  VATIGFFDGVHLGHQFLIRQVVKTARDAGLSSMVITFDKHPRQVLHSHYVPELLTTTEQK 81

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L       ++   FT E AN +A+QF+  VL   L+V+ ++ G   RFG +R     
Sbjct: 82  LQLLSATAVDQVVVLPFTQEMANMTAQQFMGNVLHRRLQVRKLVIGYDNRFGHNREEGFD 141

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
                G   G   +  +E    K  + VSSS IR  + +G +  A   LG  + + + V+
Sbjct: 142 DYVCYGRALGIEVIRSEEFSLIKDAVHVSSSAIRKYIHEGSMEQANRCLGRPYVLTAHVV 201

Query: 198 HGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNG 254
            G K GR LGFPTAN+ LS    +L   GVYA++ + +     Y  + + G  PT   NG
Sbjct: 202 DGCKEGRKLGFPTANLNLSEITQLLPAMGVYAVKAQVEGTGPWYRAMTSIGMRPTY--NG 259

Query: 255 -PLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             L +E+ I + F + IY ++ +V+FF  LR E +F  +  L   + ED ++
Sbjct: 260 TSLTIETHILEGFHENIYDKQLSVAFFKRLRDEKRFDSLALLHAKIAEDARE 311


>gi|300727497|ref|ZP_07060888.1| riboflavin biosynthesis protein RibF [Prevotella bryantii B14]
 gi|299775200|gb|EFI71801.1| riboflavin biosynthesis protein RibF [Prevotella bryantii B14]
          Length = 311

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 148/300 (49%), Gaps = 13/300 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +L   +  A    +   V++F  HPR ++        LS    +
Sbjct: 17  VATIGFFDGVHRGHQFLLHHVVDEAKKCGLKSMVITFESHPRKVLHLDYQPEMLSTLDEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L  +G       +F  +TA+ SA  F++KVL + L V+ +  G   RFG +R     
Sbjct: 77  LNLLAGLGVDTCGLLRFDQQTASMSAFYFMEKVLRDQLHVRKLYIGYDNRFGHNREEGFN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              K G++ G   +     +  +   VSS+ IR  L +G V  A   LGY +++  +V+ 
Sbjct: 137 DYVKYGKQLGIEVINTSVFQLQQVN-VSSTVIRKMLYEGKVEEAHACLGYPYSLTGEVVR 195

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGP 255
           G + GR LGFPTAN+ LS    ++   G YA+    + D   Y G+ + G  PT      
Sbjct: 196 GFQEGRRLGFPTANIDLSACEKLIPANGAYAVLVHIEGDSRVYRGMMDIGNRPTFCG--- 252

Query: 256 LLLESF---IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            L  S+   IFDF+  IYG+R +VSF  ++R E KF+ I+ LK  +  D++     L+ +
Sbjct: 253 -LKRSYEVNIFDFTGNIYGKRVSVSFMHFIRTEQKFESIDALKAQLENDKRVVNDKLDKN 311


>gi|328465721|gb|EGF36925.1| riboflavin kinase [Lactobacillus helveticus MTCC 5463]
          Length = 320

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G FDG+HLGH  ++ +A +IA+    P+ VL+F+ HP+ I         L     +
Sbjct: 25  ILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLDEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT + +   A+ F+  V+++ L   TV+ G  + +G     +  
Sbjct: 85  ADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVIIK-LNADTVVAGFDYTYGPKETANMK 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K   K  F  V I +   N  +I  S+ IR A+ +G +  A  L+G+R+ +   V H
Sbjct: 144 NLPKFA-KGRFEIVVIPKQIFNGKKI-GSTEIRQAIREGKMDLAFQLMGHRYVMSGTVGH 201

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+   S  ++ K GVYA + +   +  Y  + + G N T+     L 
Sbjct: 202 GKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNGKW-YESMTSVGYNVTIGQPEKLF 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+
Sbjct: 261 IESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQ 305


>gi|306785597|ref|ZP_07423919.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu003]
 gi|306798694|ref|ZP_07436996.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu006]
 gi|306807411|ref|ZP_07444079.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu007]
 gi|308232241|ref|ZP_07415404.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu001]
 gi|308377125|ref|ZP_07441217.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu008]
 gi|308378099|ref|ZP_07481509.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu009]
 gi|308379316|ref|ZP_07485843.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu010]
 gi|308380470|ref|ZP_07490061.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu011]
 gi|308405967|ref|ZP_07494595.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu012]
 gi|308214576|gb|EFO73975.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu001]
 gi|308329780|gb|EFP18631.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu003]
 gi|308341074|gb|EFP29925.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu006]
 gi|308346142|gb|EFP34993.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu007]
 gi|308348879|gb|EFP37730.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu008]
 gi|308353599|gb|EFP42450.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu009]
 gi|308357445|gb|EFP46296.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu010]
 gi|308361394|gb|EFP50245.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu011]
 gi|308365006|gb|EFP53857.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu012]
 gi|323718632|gb|EGB27796.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CDC1551A]
          Length = 324

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 159/318 (50%), Gaps = 21/318 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S   
Sbjct: 10  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G ++ A   LG
Sbjct: 130 KKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS------- 237
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 190 RPHRVEGVVVRGEGRGAELGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVP 247

Query: 238 ---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF+ + +L
Sbjct: 248 GERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQL 306

Query: 295 KIYMGEDEKKARKILESS 312
              MG D ++AR +L + 
Sbjct: 307 VAAMGADTERARDLLSTG 324


>gi|56417122|ref|YP_154196.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. St. Maries]
 gi|255004600|ref|ZP_05279401.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. Virginia]
 gi|56388354|gb|AAV86941.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. St. Maries]
          Length = 303

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 5/289 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDGIHLGH  I  +  + A   + P  VL+F+PH    ++     F L     + 
Sbjct: 15  LTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPHTAAFLRQRKN-FLLVDFEHKV 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E  G   L   +F  E A  S + FI  VLV   + + V+ G    FG   AG+   
Sbjct: 74  ELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKARHVVVGKDCVFGHKCAGNLKS 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G+    + +   +  +  SSS IR  L  G +  A  LLG R  +   V+ G
Sbjct: 134 LELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGDIETANLLLGRRHVVSGRVLKG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              G+ +GFPT N+ +   +L K GVY  R R      +  GV N G  PT       LL
Sbjct: 193 RGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYWLPGVVNIGTRPTFAEEICPLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E  +FDF  ++YG+   V    +LRPE KF ++++L   + +D  + ++
Sbjct: 253 EMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQIEQDISRVKQ 301


>gi|260101359|ref|ZP_05751596.1| riboflavin biosynthesis protein RibF [Lactobacillus helveticus DSM
           20075]
 gi|260084811|gb|EEW68931.1| riboflavin biosynthesis protein RibF [Lactobacillus helveticus DSM
           20075]
          Length = 320

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G FDG+HLGH  ++ +A +IA+    P+ VL+F+ HP+ I         L     +
Sbjct: 25  ILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLDEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT + +   A+ F+  V+++ L   TV+ G  + +G     +  
Sbjct: 85  ADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVIIK-LNADTVVAGFDYTYGPKETANMK 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K   K  F  V I +   N  +I  S+ IR A+ +G +  A  L+G+R+ +   V H
Sbjct: 144 NLPKFA-KGRFEIVVIPKQIFNGKKI-GSTEIRQAIREGKMDLAFQLMGHRYVMSGTVGH 201

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+   S  ++ K GVYA + +   +  Y  + + G N T+     L 
Sbjct: 202 GKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNGKW-YESMTSVGYNVTIGQPEKLF 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+
Sbjct: 261 IESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQ 305


>gi|168180707|ref|ZP_02615371.1| riboflavin biosynthesis protein RibF [Clostridium botulinum NCTC
           2916]
 gi|226949767|ref|YP_002804858.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A2 str. Kyoto]
 gi|182668627|gb|EDT80606.1| riboflavin biosynthesis protein RibF [Clostridium botulinum NCTC
           2916]
 gi|226841191|gb|ACO83857.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A2 str.
           Kyoto]
          Length = 306

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 160/291 (54%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  N     VL+F  HP  TI +  +P   L  PS +
Sbjct: 18  IALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNTINKDLAPKILLDNPS-K 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KIL++ G   +    F  E      E FI+K ++ +      + G  +RFG    GD  
Sbjct: 77  VKILKENGVDLVNFINFDKEYMKLCPEDFIKK-MIYYYNAGGFVVGFNYRFGYKNLGDIE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  +  +LG  + ++ +++
Sbjct: 136 LLDKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKSKKMLGRNYFLKGNIV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 195 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VEDKKL 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 253 NIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSFAKR 303


>gi|300361896|ref|ZP_07058073.1| FAD synthetase [Lactobacillus gasseri JV-V03]
 gi|300354515|gb|EFJ70386.1| FAD synthetase [Lactobacillus gasseri JV-V03]
          Length = 312

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 156/290 (53%), Gaps = 7/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ +G FDG+H+GH  +++ A  IA     P+ V++F+ HP+ I ++      L     +
Sbjct: 20  ILTLGFFDGVHIGHQKLIKDAKLIAEEKKLPLMVMTFDKHPKEIYKNDHKFVYLETAHEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E+ +EK+G   L+  KFT E +    + F+ +V+++ L+  TV+ G  + +G     +  
Sbjct: 80  EQKMEKLGVDYLVIIKFTKEFSQLKPQDFVDQVIMK-LKADTVVVGFDYTYGPKDIANVE 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K     G   + ++  ++     V S+ IR A+  G+V  AA LLG  +     ++H
Sbjct: 139 NLPKFAR--GRFQIVVEPKQSIDKIKVGSTYIRKAIQGGNVELAAALLGQPYETSGIIVH 196

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + G  +GFPTAN+ +S   +L  EGVYA R +   +  +  + + G N T   N  L 
Sbjct: 197 GFRRGHKIGFPTANLDISDAKVLPAEGVYATRAKINGKW-HDAMTSVGYNETFKTNHGLT 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   + +D++  ++
Sbjct: 256 IETNIFNFDEEAYGEPLTLAWYKFIRSNKKFSGIEELSRQLDQDKRNIKQ 305


>gi|320102616|ref|YP_004178207.1| Riboflavin kinase [Isosphaera pallida ATCC 43644]
 gi|319749898|gb|ADV61658.1| Riboflavin kinase [Isosphaera pallida ATCC 43644]
          Length = 376

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 56/359 (15%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           LP  ++G V++IGNFDG+H GH ++LE+   +AN    P   L+F+PHP  +++      
Sbjct: 10  LPTEVRGAVLSIGNFDGVHRGHRVLLERVRALANQLGGPALALTFDPHPLALLKPDRVPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           TL+  + + ++L + G   +  ++      N +A +F  +VL+   + + ++ G  F FG
Sbjct: 70  TLTRLARRVQLLRQAGMDEVAVFQTGPWLLNLTAREFFDRVLIRQFQARGIVEGPNFMFG 129

Query: 131 KDRAGDRGILQKRGEKYGF----------HTVFIDELRNNKSQ----------------- 163
           KDR GD   L    ++ G            TV  +  R +++                  
Sbjct: 130 KDRGGDPERLAGWCKESGVVFEVVAAVREGTVGFEAWRPSENDPRLLEPSKQAGSQGDPF 189

Query: 164 --IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
              VSSS IR  +  G V  AAH LG    +E  V+ G + GR LGFPTAN++   +++ 
Sbjct: 190 HAPVSSSRIRGLIDAGRVEEAAHWLGRPHRLEGRVVGGAQRGRELGFPTANLEAIVEMIP 249

Query: 222 KEGVYAI------RFRTQDQTSYSGVANFGRNPTMVPN---------GP--------LLL 258
            +GVYA         R  D      +A    +  + P+         GP          +
Sbjct: 250 ADGVYAALAHVGPHQRDLDADPTGRLAEEWESGRLAPSLLRAAAVHVGPNATFGVNQRSV 309

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           E+F+ DF  ++YG R  +     LR   KF  +E L   M  D +  R +  +  PL+E
Sbjct: 310 EAFLLDFQGDLYGHRLALDLIAQLRHSQKFDSVEGLIARMNVDVELTRAL--TLQPLAE 366


>gi|160946365|ref|ZP_02093574.1| hypothetical protein PEPMIC_00325 [Parvimonas micra ATCC 33270]
 gi|158447481|gb|EDP24476.1| hypothetical protein PEPMIC_00325 [Parvimonas micra ATCC 33270]
          Length = 308

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 16/298 (5%)

Query: 21  VVAIGNFDGIHLGHH-LILE-QAIKIANNSPITVLSFNPHPRTII--QSSSPIFTLSPPS 76
           VVA+GNFDG H GH  LILE   +K+       V  F  H + +I  Q++S I      S
Sbjct: 18  VVALGNFDGFHRGHQKLILELNNVKLDKGYKSAVFLFENHTKDLIFHQNASRIM-----S 72

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            ++K+  LE      +   +F+ +  N S ++F+  + +  L +K ++ G  ++F K+R 
Sbjct: 73  FEDKLNKLESFKIDYVFSIEFSEKIKNLSPKEFLDFLTIN-LNIKHIVVGEDYKFSKNRE 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   ++   ++       ID+LR +  +I SS+ I   +  G +  A  LLG  F+I+ 
Sbjct: 132 GNTDFIKSYMKEKCLSCTIIDKLRYDNIEI-SSTKIIEYIKSGKIELANDLLGDNFSIKG 190

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V  G + GR LG+PTAN+++S + +++KEGVY  +    D   Y   ++ G NPT   N
Sbjct: 191 KVTQGFQRGRDLGYPTANLEISFNYVMVKEGVYFTK-TIVDGKGYFSFSSVGYNPTF-DN 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +ES IFDF ++IYG+   + F + LR  IKF  +E+L   + +DE + R+++++
Sbjct: 249 KKSTIESHIFDFDKDIYGKDIELCFLERLRDNIKFNSVEELIEQLKKDEIRCRELIKN 306


>gi|224155008|ref|XP_002337549.1| predicted protein [Populus trichocarpa]
 gi|222839552|gb|EEE77889.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 129/260 (49%), Gaps = 25/260 (9%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           P       V IGNFDG+H GH   L L  A       P  VL+F PHPR     +     
Sbjct: 169 PGRESACAVTIGNFDGVHRGHQAMLALLSAEAAQRGVPTCVLTFEPHPRDYFAQTLGRPE 228

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           ++P  I   ++K+  LE+ G    +   F    A+ S + FI +VLV  L  K V+ G  
Sbjct: 229 IAPARIGTLRDKLSELERCGVDQTVVLPFNQTLASQSPQAFIDEVLVAGLGAKYVLVGDD 288

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNA 182
           FRFG  RAGD  +L   G++ GF     D  R N  ++    VSS+++R AL +G + +A
Sbjct: 289 FRFGAQRAGDYAMLDAAGQRQGF-----DVARMNSYEVHGLRVSSTHVRAALAEGRMQDA 343

Query: 183 AHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEGVYAIRFRTQ 233
           A LLG+ +TI   V+HG K+GR+L         GF T N++ +       G++A+     
Sbjct: 344 ARLLGHPYTISGHVVHGRKLGRSLAESRQGAGDGFRTLNLRFNHWKPAASGIFAVLVHGL 403

Query: 234 DQTSYSGVANFGRNPTMVPN 253
           ++    GVAN G  P++ P 
Sbjct: 404 NERPLRGVANLGVRPSLDPT 423


>gi|237740781|ref|ZP_04571262.1| riboflavin kinase [Fusobacterium sp. 2_1_31]
 gi|229422798|gb|EEO37845.1| riboflavin kinase [Fusobacterium sp. 2_1_31]
          Length = 318

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + IK A  N+    V +F  HP   + S      ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFSERKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K       Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVIMQKLDKNFLEYTPLEFV-RILKNKLKVKEIFVGFNFSFGKGGLGTAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + ++EL       ++VSSS IR  +       A  LL +   +  +VI
Sbjct: 138 LEYLAE---IHNIKVNELPPVTLDGELVSSSAIRKKIANSDFDGAIKLLDHPMIVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF +E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 MSLEVHILDFDREVYGEKLYIQIVKFMREEKKFSSIDELKATIQAD 298


>gi|147669222|ref|YP_001214040.1| riboflavin kinase / FMN adenylyltransferase [Dehalococcoides sp.
           BAV1]
 gi|146270170|gb|ABQ17162.1| riboflavin kinase / FMN adenylyltransferase [Dehalococcoides sp.
           BAV1]
          Length = 305

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 148/294 (50%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+HLGH  ++ +  K A   N    +++F  HP  ++        LS   ++
Sbjct: 18  LITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDDIKLILS---LE 74

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   LE+MG   +I   FT E A   A  F+   L++ L ++ ++ G+ F  G++RAGD
Sbjct: 75  ERNLALEQMGLDRIIMLSFTPEIAEICATDFV-GYLLDHLHMQGIVVGSDFALGRNRAGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++      F    +      ++QIVSS+ IR AL  G+V  A  +LG  + +   V
Sbjct: 134 ATALRRLSHIMDFSVSVV-SPVVIENQIVSSTAIRQALRTGNVTKARLMLGRNYHLRGTV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
             G   G  LGFPTAN+ L   + L  +GVYA +    ++  Y  VAN G  PT      
Sbjct: 193 QSGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLAEK-EYKAVANIGSCPTF-GQEE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  + DF  +I GQ   V F ++LR E+ F + E LK  +  D  KAR IL
Sbjct: 251 HRLEVHLLDFKGDIKGQTLKVEFVEFLRSEVCFANAEALKAQISVDILKARDIL 304


>gi|73748442|ref|YP_307681.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. CBDB1]
 gi|289432489|ref|YP_003462362.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. GT]
 gi|73660158|emb|CAI82765.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. CBDB1]
 gi|288946209|gb|ADC73906.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. GT]
          Length = 305

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 148/294 (50%), Gaps = 12/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IG FDG+HLGH  ++ +  K A   N    +++F  HP  ++        LS   ++
Sbjct: 18  LITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDDIKLILS---LE 74

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   LE+MG   +I   FT E A   A  F+   L++ L ++ ++ G+ F  G++RAGD
Sbjct: 75  ERNLALEQMGLDRIIMLSFTPEIAEICATDFV-GYLLDHLRMQGIVVGSDFALGRNRAGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++      F    +      ++QIVSS+ IR AL  G+V  A  +LG  + +   V
Sbjct: 134 ATALRRLSHIMDFSVSVV-SPVVIENQIVSSTAIRQALRTGNVTKARLMLGRNYHLRGTV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
             G   G  LGFPTAN+ L   + L  +GVYA +    ++  Y  VAN G  PT      
Sbjct: 193 QSGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLAEK-EYKAVANIGSCPTF-GQEE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  + DF  +I GQ   V F ++LR E+ F + E LK  +  D  KAR IL
Sbjct: 251 HRLEVHLLDFKGDIKGQTLKVEFVEFLRSEVCFANAEALKAQISVDILKARDIL 304


>gi|222475487|ref|YP_002563904.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Florida]
 gi|254995295|ref|ZP_05277485.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Mississippi]
 gi|222419625|gb|ACM49648.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Florida]
          Length = 303

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 5/289 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +  GNFDGIHLGH  I  +  + A   + P  VL+F+PH    ++     F L     + 
Sbjct: 15  LTFGNFDGIHLGHVQIFAELTRRAAELSLPSAVLTFSPHTAAFLRQRKN-FLLVDFEHKV 73

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E  G   L   +F  E A  S + FI  VLV   + + V+ G    FG   AG+   
Sbjct: 74  ELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKARHVVVGKDCVFGHKCAGNLKS 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G+    + +   +  +  SSS IR  L  G +  A  LLG R  +   V+ G
Sbjct: 134 LELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGDIETANLLLGRRHVVSGRVLKG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
              G+ +GFPT N+ +   +L K GVY  R R      +  GV N G  PT       LL
Sbjct: 193 RGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYWLPGVVNIGTRPTFAEEICPLL 252

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E  +FDF  ++YG+   V    +LRPE KF ++++L   + +D  + ++
Sbjct: 253 EMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQIEQDISRVKQ 301


>gi|154497689|ref|ZP_02036067.1| hypothetical protein BACCAP_01665 [Bacteroides capillosus ATCC
           29799]
 gi|150273187|gb|EDN00332.1| hypothetical protein BACCAP_01665 [Bacteroides capillosus ATCC
           29799]
          Length = 301

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 4/290 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  +L +  ++A     T   ++F+ HP  +I  S      SP    
Sbjct: 7   VIALGFFDGVHRGHGALLSRVAQVAQEMGATPAAVTFDTHPENLIIGSPMPLISSPLDRA 66

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E +    G   +I   F     +     F+   L+       ++ G  F FG    G+  
Sbjct: 67  ELMRRYYGIQEVIIAHFDDRMMHMPWRDFVTDFLIRENGAVHLVAGHDFHFGYKGEGNPE 126

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    + G     I ++  +   I SS+ IRT L +G +  A + LG+  T+   V H
Sbjct: 127 RLKTVCAEMGIGCDIIPKVELDGITI-SSTYIRTLLAQGEMERANYFLGHPHTLTDTVAH 185

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+K+G TLGFPT N+  +P +L+   GVYA R   ++  S   V N G  PT+  +G + 
Sbjct: 186 GKKLGTTLGFPTVNLHFAPGVLIPARGVYATRVCFENGDSRPAVTNIGVRPTVDDHGSVN 245

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E FI DF  ++YGQ   + F+ +LR E KF  +E L+  +  + ++ R+
Sbjct: 246 VEGFILDFDGDLYGQTIRMEFYRHLRGEQKFPSLEALRDEVMRNAEQTRE 295


>gi|157151108|ref|YP_001450339.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075902|gb|ABV10585.1| riboflavin biosynthesis protein RibF [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 305

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 18/311 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           +H+ +  +I Q+     +  V+ +G FDG+H GH  +  +A +IA      I VL+F   
Sbjct: 4   IHISNEKDIQQT-----QDTVLVLGYFDGLHRGHQALFAEARQIAAEKKLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +E++LE  G   L    FT   A   A+ F +K  V+ L
Sbjct: 59  PKLAFVRYQPDLLLHLNSPEEREQLLEAQGVDYLYLIDFTSCFAGNKAKDFFEK-YVKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  + FG D+   + + Q     +    V +  + N   + + S+ IR A+ +
Sbjct: 118 KARAVVAGFDYHFGSDKKEAKELSQF----FDGQIVIVSSV-NEDDKKICSTRIRQAIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V +A  LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY +     + 
Sbjct: 173 GRVADATKLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVFLPGDGVYVVEVE-HNG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T      L  E+ IFDFS++IYG    + + D +R  +KF  IE L 
Sbjct: 232 KRYKGMASVGKNVTF-EGDELRFEANIFDFSRDIYGDTIKIYWLDKIRDMVKFDGIESLL 290

Query: 296 IYMGEDEKKAR 306
             +  DE  AR
Sbjct: 291 NQLKSDEAIAR 301


>gi|313205214|ref|YP_004043871.1| riboflavin biosynthesis protein ribf [Paludibacter propionicigenes
           WB4]
 gi|312444530|gb|ADQ80886.1| riboflavin biosynthesis protein RibF [Paludibacter propionicigenes
           WB4]
          Length = 313

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 5/287 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  +G FDG+H GH  ++ +  + A+   +   V++F  HP  ++        LS  + +
Sbjct: 16  IATVGFFDGVHAGHRFLINELKERASAEKLKSVVVTFATHPHKVLNDDFTPELLSTLAEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++LE  G    I   FT E A  SA  F++ VL     V++++ G   RFG +R     
Sbjct: 76  LQLLESTGIDYCIVLNFTKEMAALSAFDFLKLVLSGQYNVRSLLVGHDHRFGHNRQDGFP 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             +  GEK G           ++ Q +SSS IR AL +G +  A  +L Y ++    V +
Sbjct: 136 EYKAYGEKLGMKVTQAKRFSTSEIQHISSSQIRLALHRGEIGAANDILTYNYSFTGKVTN 195

Query: 199 GEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G KIGR +GFPTAN+  + S  ++   GVYA+    Q++  Y G+ N G  PT+      
Sbjct: 196 GFKIGRKIGFPTANLVPENSEKLIPPFGVYAVLVYWQNEV-YKGMMNIGTRPTLNNGYHT 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            LE  I DF ++IY Q   + F   +R E KF  +++L   +G+D++
Sbjct: 255 SLEVHIIDFDEDIYNQLIRIEFIQKIRDEKKFNGVDELIEQLGKDKQ 301


>gi|91200984|emb|CAJ74041.1| similar to riboflavin biosynthesis protein RibF [Candidatus
           Kuenenia stuttgartiensis]
          Length = 318

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 155/291 (53%), Gaps = 11/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV +G FDG+H GH  I+E    +A+  +    +++F+ HPR ++++ +P F ++  S +
Sbjct: 18  VVTLGVFDGVHRGHQKIIEYTKSLASKKSGDSVIITFDVHPRVLLENKTPFF-ITSLSHR 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + E++G    +   F    A  +A+ FI+ +LV+ L+ K ++ G    FGK+R+G+  
Sbjct: 77  LVLFERLGVDYTLILPFNDSLAQTNAKDFIENILVKELDSKCIVLGFNCHFGKNRSGNIK 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++++   KY +           K Q++SS+ IR A+ +G +  A  +LG   ++   V+ 
Sbjct: 137 LVKELAGKYHYEAHECPP-ETYKGQVISSTVIRKAIQEGALEKAEAMLGRPVSVLGTVVR 195

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP------ 252
               G T+G+PTAN+ L  +I   +GVYA +   +++  Y  + N G  PT         
Sbjct: 196 KSGRGVTMGYPTANLDLHHEIRPPQGVYATKVCWKER-EYLALTNIGSRPTFFKESLSSE 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           +  + +E+ I DF + IYG+   V F   +R EI F  IE LK  + +D++
Sbjct: 255 DETMEIETHILDFHESIYGKNLEVQFLFRIRDEIPFGSIEALKQQIEKDKE 305


>gi|325270072|ref|ZP_08136680.1| riboflavin biosynthesis protein RibF [Prevotella multiformis DSM
           16608]
 gi|324987657|gb|EGC19632.1| riboflavin biosynthesis protein RibF [Prevotella multiformis DSM
           16608]
          Length = 346

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 9/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+H GH  ++ + +  A  S +   V++F+ HPR ++Q+      L+    +
Sbjct: 41  AATIGFFDGVHRGHRFLIGRVVDEARRSRMASAVITFDRHPRQVLQADYQPELLTTLERK 100

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +     ++   F    A  SA +F+ +VL   L V+ ++ G   RFG DRA    
Sbjct: 101 LQLLSETQVENILVLHFDRSLAALSARRFMDEVLRRQLNVRKLLIGYDNRFGHDRAEGFD 160

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G+  G   V  D       + VSSS IR  + +G + +A  LLGY +TIES ++ 
Sbjct: 161 DYVRYGQALGIGVVRADAFLPGGEK-VSSSVIRDRIRRGDIASANRLLGYAYTIESTIVR 219

Query: 199 GEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGP 255
           G   G  LGFPTAN+ ++   LL    GVYA+  R +D + +  G+ N G  PT   NG 
Sbjct: 220 GYGNGHRLGFPTANLDMAACRLLIPAAGVYAVDVRQKDSSEWRRGMMNIGTRPTF--NGK 277

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            + +E  IF F  ++Y +   VSF   +R E +F  +E L   + +D +    + ++ 
Sbjct: 278 AMSMEVNIFHFDGDLYDKPLAVSFIAKIRDERRFGSLEALAHQLEQDREAINHLFDAG 335


>gi|331002476|ref|ZP_08325994.1| riboflavin biosynthesis protein RibF [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410292|gb|EGG89726.1| riboflavin biosynthesis protein RibF [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 316

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 12/312 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII--Q 64
           IN +  N  +   V IG FDG H GH  +     + AN   +   V SF   P  I+  +
Sbjct: 5   INTTDINITEKTAVVIGKFDGEHRGHRKLFRTLKEEANKKGLKTVVFSFRTLPSNIVRNK 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +++ IFT      + + LE++G    I Y F +  A  + E+F+  +L+  L +  ++ G
Sbjct: 65  NTTQIFTNVE---RRRKLEELGIDYYIEYPFDMNIARLTGEEFLVDILIGKLGMAEIVAG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               FG  ++G+  +L K  +  GF    I + +++    +SS+ IR+ L +G +  A  
Sbjct: 122 DDAAFGYKKSGNIELLNKLSKSLGFDLRIITKEKDDFQNDISSTLIRSKLDEGDMEEANK 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSGVA 242
           LLG  ++I   V  G KIG  +GFPT N+    +  L K GVYA R R   D T Y G+ 
Sbjct: 182 LLGSVYSITGTVEEGNKIGAKIGFPTLNIFPPKEKHLPKPGVYASRVRIGDDDTMYLGLT 241

Query: 243 NFGRNPTMVP---NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           N G NP++     N    +E+++++F   +YG+   V  + Y+R EIKF+ +++LK  + 
Sbjct: 242 NVGSNPSIENDKRNHIYRVETYLYNFDASLYGREIEVFLYKYIRQEIKFQSLDELKSQIS 301

Query: 300 EDEKKARKILES 311
           +D+ +    L S
Sbjct: 302 KDKIEVLNFLNS 313


>gi|313888291|ref|ZP_07821962.1| riboflavin biosynthesis protein RibF [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845694|gb|EFR33084.1| riboflavin biosynthesis protein RibF [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 302

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 157/279 (56%), Gaps = 12/279 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ-SSSPIFTLSPPSI 77
           V+A+GNFDG+H GH  ++ +A+K A   N   ++L FN H   +++     I T +    
Sbjct: 17  VIALGNFDGVHKGHMELINRAVKNAKKLNIKSSLLLFNEHTDNLVKVGKKDIITTNQTKF 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  I+E +G   +    FT E   Y+   F++  L + L++K ++ G  + +G  ++GD 
Sbjct: 77  E--IIEGLGVDIIYLINFTREFMAYTPIMFLKDFLADNLKIKGIVVGYDYTYGYKKSGDV 134

Query: 138 GILQKRGEKYGFHTV-FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             L K   KY F +V  ID++ ++  +I SS+ IR+ + +G +  A  LL   + +  ++
Sbjct: 135 DFLNKN--KYLFKSVDVIDQISSHGVKI-SSTLIRSLIEEGKLKEANELLSRPYKLIGEI 191

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IH + +G+ +G+PTAN++L  + ++ + GVY        +  +    N G NPT+  +G 
Sbjct: 192 IHAKGLGKKMGYPTANLKLIDNFVIPRFGVYDTDIIINGE-RFRASTNIGTNPTVEHDG- 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + +E+ I DF+++IYG+   +   D++RPE+KF  IE+L
Sbjct: 250 IKIEAHILDFNRDIYGEIVELELLDFVRPELKFDSIEEL 288


>gi|317508350|ref|ZP_07966024.1| riboflavin biosynthesis protein RibF [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253348|gb|EFV12744.1| riboflavin biosynthesis protein RibF [Segniliparus rugosus ATCC
           BAA-974]
          Length = 314

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 148/302 (49%), Gaps = 19/302 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ + +  A     P  +++F+PHP  +I++      L+  + +
Sbjct: 18  VATIGTFDGVHRGHAELVRRTVNEARKRRLPSALVTFDPHPAQVIRAGDHPAQLTTLTRR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++ ++G        FT E A  SAE+F+ + LV  L V  V+ G  F FG    G   
Sbjct: 78  AELVGQLGIDVFCVIPFTRELAKQSAEEFVHEFLVSKLHVAKVLVGENFTFGYKATGKID 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L   G ++GF    +  L    +  VSS+ IR+ +  G V  A   LG    +E  V+H
Sbjct: 138 MLVDLGRRFGFEAEAV-RLFTEHAVTVSSTYIRSVVAAGDVSAATEALGRPHRVEGVVVH 196

Query: 199 GEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG- 254
           G+  GR LGFPTAN  ++P +   +  +GVYA  F      S  G +  GR P  V  G 
Sbjct: 197 GDGRGRELGFPTAN--VAPPMYSAIPADGVYAAWFSI---LSPGGRSALGRVPAAVSVGT 251

Query: 255 -PLL------LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            P        +E+++ D + ++YGQ   V F   LR    FK  E+L   + +D  + R+
Sbjct: 252 NPTFSGRERTVEAYVLDKNVDLYGQYVAVDFVRRLRDMRAFKSREELVEAIAQDVAETRE 311

Query: 308 IL 309
           +L
Sbjct: 312 VL 313


>gi|83648576|ref|YP_437011.1| riboflavin biosynthesis protein RibF [Hahella chejuensis KCTC 2396]
 gi|83636619|gb|ABC32586.1| riboflavin biosynthesis protein RibF [Hahella chejuensis KCTC 2396]
          Length = 276

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 137/269 (50%), Gaps = 12/269 (4%)

Query: 49  PITVLSFNPHPRTIIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYS 103
           P  V+ F P PR   +        +PP +   +EK+  +  +    L+  +F       +
Sbjct: 4   PAVVMVFEPQPREFFEKLD-----APPRLMRFREKLDAIAALNVDYLLCLQFNRRLRGLT 58

Query: 104 AEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ 163
           A+QFI  VLV  L VK ++ G  FRFG DR+GD  +L+K G   GF +V        + +
Sbjct: 59  AQQFIDDVLVTGLHVKHLVVGDDFRFGCDRSGDFRLLEKSGLVSGF-SVENTPTVEVEGE 117

Query: 164 IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE 223
            VSS+ IR  L +G    A  LLG  ++I   V+HG K+GR L  PTAN+ L     +  
Sbjct: 118 RVSSTRIRATLAQGEFTQAEDLLGRPYSITGCVVHGRKLGRQLNAPTANVSLGRKRPVLS 177

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYL 282
           GVY ++          GVAN G  PT+   G    LE  +F+ + +IYGQR  V F + L
Sbjct: 178 GVYLVKTTLATGHVRFGVANIGVRPTIDGLGVTPALEVHLFEHADDIYGQRINVQFLEKL 237

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILES 311
           R E KF  +E+L+  +  D + A++ L+S
Sbjct: 238 RDERKFSGLEQLQAQIQRDIEGAKRRLQS 266


>gi|170754240|ref|YP_001781957.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum B1 str. Okra]
 gi|169119452|gb|ACA43288.1| riboflavin biosynthesis protein RibF [Clostridium botulinum B1 str.
           Okra]
          Length = 306

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 161/291 (55%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  N+    VL+F  HP  TI +  +P   L  PS +
Sbjct: 18  IALGSFDGLHKGHMKLIKEIKKMAKDNSGKSMVLTFKDHPLNTINKDLAPKILLDNPS-K 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KIL++ G   +    F  E      E FI+K ++ +      + G  +RFG    GD  
Sbjct: 77  VKILKENGVDLVNFINFDKEYMKLCPEDFIKK-MIYYYNAGGFVVGFNYRFGYKNLGDIE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  A  +LG  + ++ +++
Sbjct: 136 LLNKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGNIV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 195 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VEDKKL 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF+++IY +   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 253 NIETHILDFNKDIYEENIVIYFSKRIRDEKKFSSLEELKEQLKKDKNFAKR 303


>gi|168184620|ref|ZP_02619284.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Bf]
 gi|237795850|ref|YP_002863402.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum Ba4 str. 657]
 gi|182672254|gb|EDT84215.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Bf]
 gi|229261513|gb|ACQ52546.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Ba4
           str. 657]
          Length = 306

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 159/291 (54%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  N     VL+F  HP  TI +  +P   L  PS +
Sbjct: 18  IALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKDHPLNTINKDLAPKILLDNPS-K 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KIL++ G   +    F  E      E FI+K ++ +      + G  +RFG    GD  
Sbjct: 77  VKILKENGVDLVNFINFDKEYMKLCPEDFIKK-MIYYYNAGGFVVGFNYRFGYKNLGDIE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  A  +LG  + ++ +++
Sbjct: 136 LLDKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGNIV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 195 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VEDKKL 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF ++IYG+   +     +R E KF  +E+LK  + +D+  A++
Sbjct: 253 NIETHILDFHKDIYGENIVIYLSKRIRDEKKFSSLEELKKQLKKDKSFAKR 303


>gi|329944615|ref|ZP_08292755.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328530168|gb|EGF57051.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 341

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 165/331 (49%), Gaps = 18/331 (5%)

Query: 1   MHVFHNIE---INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN------SPIT 51
           M V++  E    + S P+   G VV +G FDG+H GH  +L + +++A+        P+ 
Sbjct: 1   MEVWYGAEQVPASLSAPDG-PGAVVTMGIFDGVHRGHQAVLGRVVELADELARGGERPLA 59

Query: 52  V-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           V ++F+PHPR++ Q  + +  ++  + +   L+ +G  A++   +TLE A  S + F++ 
Sbjct: 60  VAVTFDPHPRSVHQPEADLPLITSLTDRLASLKDLGLDAVLVITYTLEFATQSPQDFVRT 119

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            L   L  + V+ G   RFG   +GD   L++ G   GF    + ++R+ + +  SS+ I
Sbjct: 120 WLEGLLGARAVVVGDDVRFGCRNSGDAATLEEIGRADGFAVEIVSKIRSEEGRRWSSTWI 179

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYA-- 227
           R  L +G++  A  +LG    +   V+ G + GR LGFPTAN++ +   ++  +GVYA  
Sbjct: 180 RQCLKEGNMGQARQVLGRPHRLRGVVVRGLRRGRELGFPTANLEAATAGVVPPDGVYAGW 239

Query: 228 -IRFRTQDQTS--YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLR 283
            +R    D          + G NPT        +E+ +   +   +YG+   +   + LR
Sbjct: 240 LVRGGGADGGGQRLPAAISIGTNPTFDDVPRRTVEAHVLGRADLNLYGEEIGIELVERLR 299

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           P + F  ++ L + M  D +   +ILE   P
Sbjct: 300 PMLAFDGLDPLLVQMRADIEDTARILEVPVP 330


>gi|222100692|ref|YP_002535260.1| Riboflavin kinase/FMN adenylyltransferase [Thermotoga neapolitana
           DSM 4359]
 gi|221573082|gb|ACM23894.1| Riboflavin kinase/FMN adenylyltransferase [Thermotoga neapolitana
           DSM 4359]
          Length = 296

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-PHPRTIIQSSSPIFTLSPPSIQE 79
           VV+IG FDG+H+GH  +LE+  ++A++  +  L F   HP   +    P   LS   ++E
Sbjct: 2   VVSIGVFDGVHIGHRRVLEKLREVASSKKMPALVFTISHPPEYLSPDFPGLLLS---VEE 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++     FS ++   F  +  + S ++F++K L     V  V+ G  FRFGK+  GD   
Sbjct: 59  RVAILSRFSEVVVLDF-FQIKDLSPKEFVEKYLPG---VFGVVVGRDFRFGKNAEGDTSF 114

Query: 140 LQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           L+K G E Y       D + N K   VSSS IR  + +G V      LG  + I   V  
Sbjct: 115 LRKNGLEVYEVP----DTIVNGKK--VSSSLIRKLVQEGRVEEIPPYLGRYYEISGIVYR 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY ++    +Q    GV N G  PT+  +  +
Sbjct: 169 DRQFGRKLGFPTANIDRGREKLVNLKNGVYLVKVNLPNQEEKFGVMNVGFRPTVSDSTHV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YG    V    ++RPE KF  IE+LK  + +D + A+++++ 
Sbjct: 229 KYEVYILDFEGDLYGAHLKVEVLKFIRPEKKFNSIEELKNTITQDVETAKRLMDD 283


>gi|289426518|ref|ZP_06428261.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK187]
 gi|289153246|gb|EFD01964.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK187]
          Length = 298

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 18/297 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++        L   S++ +I
Sbjct: 10  VVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALLC--SLERRI 67

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L+  G S +    FT E A+++   F+++VL   L+ + V+ G  FRFG+   G    
Sbjct: 68  EWLKDAGASEVRVVNFTTEIASWAPAAFVERVLGP-LQPRHVLVGQNFRFGRHAVGTPDA 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L +    +G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G
Sbjct: 127 LAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVVMG 182

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS----GVANFGRNPTMVPNG 254
           ++ GR LGFPTAN+ +  D  +  +GVYA                   + G NPT   +G
Sbjct: 183 DQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTF--DG 240

Query: 255 -PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               +E+++ D    E+YG   TV+F + LR +IKF  IE L   M +D + A+++L
Sbjct: 241 VERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQMADDVETAKRVL 297


>gi|227495153|ref|ZP_03925469.1| possible FAD synthetase [Actinomyces coleocanis DSM 15436]
 gi|226831605|gb|EEH63988.1| possible FAD synthetase [Actinomyces coleocanis DSM 15436]
          Length = 326

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 8/298 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPS 76
           G VV IGNFDG+H GH ++LE+  K+A    ++   ++F+PHP  +    +P+  ++  S
Sbjct: 15  GTVVTIGNFDGVHRGHQVVLEECRKMALELGVSSVAITFDPHPLLVHCPQTPVELITSLS 74

Query: 77  IQEKILEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            +   LE  G   +A++ Y  +L T   +A +F+ ++LV+   VK V+ G    FG  + 
Sbjct: 75  DRLIALENTGLDVTAVLEYVPSLYT--LTASEFVTEILVKIFHVKAVVLGQDAHFGAGKT 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+  +L + G + GF    + +      +  SS+  R  L  G V  AA +LG   TI  
Sbjct: 133 GNVDLLNELGRELGFQVKVVADRLGESGRRWSSTWARELLATGDVSGAAEILGAAHTIRG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVA-NFGRNPTMVP 252
            V HG K GR LGFPTAN+  S   I+  +GVYA   +  D       A + G NP    
Sbjct: 193 VVQHGFKRGRELGFPTANLDDSCSGIIPADGVYAGWLQLNDSAEKLPAAISVGSNPQFAG 252

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +    +     ++YG+   V F + LR    F  +++L + M  D  KA +ILE
Sbjct: 253 QKRTIETHVLGRSDLDLYGKTIVVHFVERLRGMQCFDSLDELLLQMDADLLKASEILE 310


>gi|184155212|ref|YP_001843552.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
 gi|260662288|ref|ZP_05863184.1| riboflavin biosynthesis protein RibF [Lactobacillus fermentum
           28-3-CHN]
 gi|183226556|dbj|BAG27072.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
 gi|260553671|gb|EEX26563.1| riboflavin biosynthesis protein RibF [Lactobacillus fermentum
           28-3-CHN]
          Length = 321

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 149/296 (50%), Gaps = 10/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  ++ +A +  +    P+ VL+++  P  + Q     +  L+    
Sbjct: 21  VVAMGFFDGVHRGHQAVIARAKEEAVRRQVPLAVLTYDKLPGIVYQRYDEGVHYLTTIDR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK-DRAGD 136
           +  +LE++G   +    FT +  + S E+F+   LV  +    V+ G    +GK D A  
Sbjct: 81  KLALLEQLGADLVYLVDFTAKLGSLSPEEFVSDYLVR-MHAVAVVAGFDHTYGKKDVATM 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             ++     ++   TV   E R  K   + SS IR  + +G V +A  LLGYR+     V
Sbjct: 140 DRLVGYAAGRFDVVTVKKQETRGAK---IGSSRIRDLIDQGRVEDANQLLGYRYQTSGIV 196

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+GFPTAN+   P + +   GVY + F   D   Y G+A+ G N T   N  
Sbjct: 197 VHGLARGRTIGFPTANVAWDPLERIPAVGVYTVNFLV-DGHWYGGMASVGYNVTFGQNKH 255

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E ++FDF   IYG+  TVS+   LR EIKF  ++ L   +  D+  +  IL +
Sbjct: 256 KTIEVYLFDFKGNIYGEHVTVSWIQRLRGEIKFDGVDGLIDQLHADQINSLAILRN 311


>gi|304384874|ref|ZP_07367220.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici DSM
           20284]
 gi|304329068|gb|EFL96288.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici DSM
           20284]
          Length = 315

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 151/301 (50%), Gaps = 19/301 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT----LSP 74
           V+A+G FDG+H GH  ++++A +IAN     +  ++F+ H   +       F+    L+ 
Sbjct: 21  VLALGFFDGMHRGHQAVIQKAREIANAKGLALAAMTFDHHASVVFPKPQHRFSALSYLTS 80

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S + +++E  G   L    FT    + + ++F+ + +V  L  + V+ G  + FG    
Sbjct: 81  VSRKAELMEAAGVDILYVVNFTSAFGSLTPQEFVDQYMV-GLNAEVVVAGFDYTFGPVAT 139

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +   L +  + + F  V + ++   + Q + S+ IR A+  G +  A   LGY F    
Sbjct: 140 ANMDTLPEIAQ-HRFEVVKVPKIIA-QGQKIGSTAIRNAVADGEIDEANRYLGYPFETNG 197

Query: 195 DVIHGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+HGE  GRTLGFPTAN+     Q++P I    G+Y +  +  D T Y G+A+ GRN  
Sbjct: 198 LVVHGEARGRTLGFPTANIVSNPNQITPGI----GIYVVEIKIAD-TWYQGMASVGRNVV 252

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                P+  E  I DF+QEIYG+   V +   LR E+KF  ++ L   + +DE   R   
Sbjct: 253 FGDGRPVTTEINILDFNQEIYGETVRVKWHHRLRGEVKFASVDALIAQLHQDEADTRAFF 312

Query: 310 E 310
           +
Sbjct: 313 K 313


>gi|295698741|ref|YP_003603396.1| riboflavin biosynthesis protein RibF [Candidatus Riesia
           pediculicola USDA]
 gi|291157128|gb|ADD79573.1| riboflavin biosynthesis protein RibF [Candidatus Riesia
           pediculicola USDA]
          Length = 311

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 153/301 (50%), Gaps = 3/301 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPI 69
            ++ N   G  + IGNFD +H+GH +IL++ I+     SP  V+ F P P          
Sbjct: 8   HNIRNQHYGCSLTIGNFDSVHIGHQMILKKLIQYKYPGSPTVVMIFEPQPIEFFLGKLAP 67

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + K + +     L+   F    ++ + + FI ++L++ L ++ ++ G  F+F
Sbjct: 68  ARLTGLRDKIKYISEYEIDYLLCVNFNRSFSSLTPDDFIDQLLIKKLGIQLLVIGDDFQF 127

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK+R G+   L + G++YGFH VF  +    +   VSS++IR AL K  +  A +L+G  
Sbjct: 128 GKNRLGNFNHLFQAGKRYGFH-VFKTKSFFKRGIRVSSTSIRQALMKDDLSLARNLIGRP 186

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + +   VIHG+++G T+GFPTAN+      +  +GVY    +   + S   V N G  PT
Sbjct: 187 YQLSGRVIHGKRLGSTIGFPTANLLFKYFTIAIKGVYVAEVQGILENSIRSVVNVGFRPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           ++      +E  + DF   IYG    +     LR E +F  I +LK  + ED  +A+K  
Sbjct: 247 VMGKNR-QIEVHLIDFQTNIYGSHINIIIHKKLREEKRFNSIFELKKQIYEDISQAKKFF 305

Query: 310 E 310
           +
Sbjct: 306 K 306


>gi|167751259|ref|ZP_02423386.1| hypothetical protein EUBSIR_02245 [Eubacterium siraeum DSM 15702]
 gi|167655766|gb|EDR99895.1| hypothetical protein EUBSIR_02245 [Eubacterium siraeum DSM 15702]
          Length = 309

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 7/286 (2%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           A+G FDG+HLGH  ++E+  +     P     F  H  T +     I  L    ++ + L
Sbjct: 30  ALGFFDGLHLGHMKVVEECFRHGGLCPAM---FTFHSDTALPKRERIENLLTNDMKLEKL 86

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            + G   +    F     +Y+A  FI+KVLV+ +  K V+ G  FR G     D   L+ 
Sbjct: 87  AEAGVQYIYSPDFN-SVCDYTARDFIEKVLVKIMNAKVVVCGFDFRLGAGGGSDAEELKC 145

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
              +YG   V I     +   +V S+ I+  +  G +  A  LLGY F+IE  VI G +I
Sbjct: 146 ICREYGIKVVIIPPFSLDGC-VVHSTAIKNLIKSGEIAKANKLLGYDFSIEGRVIEGNRI 204

Query: 203 GRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           GRT+G PT N +   +I++   GVY       D      V N G  PT+      L E+ 
Sbjct: 205 GRTIGSPTINQRFPENIVMPRFGVYK-SVTYLDGRVMPSVTNIGVKPTVDYKDSPLAETH 263

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           I DF  ++YG+   VS  D++RPE +F  + +LK  + +D+  A++
Sbjct: 264 IMDFDGDLYGRTLRVSLLDFIRPERRFDSVGELKAQLDKDKITAKQ 309


>gi|289548416|ref|YP_003473404.1| riboflavin biosynthesis protein RibF [Thermocrinis albus DSM 14484]
 gi|289182033|gb|ADC89277.1| riboflavin biosynthesis protein RibF [Thermocrinis albus DSM 14484]
          Length = 314

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 147/290 (50%), Gaps = 8/290 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +G FDG+HLGH  +L++ +K+A    +   VLSF PHP  ++  S     L+    + 
Sbjct: 29  LTVGVFDGVHLGHVHLLKRLVKVAERKNLMSCVLSFYPHPARVLAPSQAPCELTTVEERA 88

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++   G   ++  KF    ++  AE FI+ V+   L  K ++ G  +R+G  R G+  +
Sbjct: 89  ELILATGVDTVVFIKFDRRFSSTKAEDFIRDVVHHRLRCKHLLVGYDWRYGFRREGEIEL 148

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            ++ G+  GF    I+     K  +VSS+ IR  L +G +  A   LG  + I   V+ G
Sbjct: 149 ARELGKDLGFEVEGIEPF-QVKGHVVSSTLIRRLLHEGRLEEAKEFLGRYYYIVRRVVRG 207

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           E  G ++G PTAN+  + ++ LKEGVYA+           GVAN+G  PT        LE
Sbjct: 208 EGRGSSIGVPTANLDHTENLCLKEGVYAVMV----NDHLPGVANYGYRPTF-DGKRKTLE 262

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             I   S  + G+   V F  +LR E KF+ +E+L+  + +D   A  IL
Sbjct: 263 VHIIGSSVNVRGKWLKVEFRAFLREERKFQRVEELREQIQKDISTALAIL 312


>gi|255976034|ref|ZP_05426620.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T2]
 gi|307279111|ref|ZP_07560169.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0860]
 gi|255968906|gb|EET99528.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T2]
 gi|306504236|gb|EFM73448.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0860]
          Length = 316

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KIA      + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                ++G  + +G K+ AG + +      ++   TV  +E+   K   +SS+ IR  + 
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAK---ISSTRIREKME 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD 234
            G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++     
Sbjct: 177 AGEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y G+ + G N T      L +E +I DF Q+IYG++  V +   LR ++KF   E L
Sbjct: 237 KW-YVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHCLRDQVKFNGAEAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              + +DE+      + S
Sbjct: 296 IDQLKQDERDTADYFQQS 313


>gi|18310664|ref|NP_562598.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens str. 13]
 gi|168214485|ref|ZP_02640110.1| riboflavin biosynthesis protein RibF [Clostridium perfringens CPE
           str. F4969]
 gi|18145345|dbj|BAB81388.1| riboflavin biosynthesis protein [Clostridium perfringens str. 13]
 gi|170714051|gb|EDT26233.1| riboflavin biosynthesis protein RibF [Clostridium perfringens CPE
           str. F4969]
          Length = 309

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++  N+S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+  L++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFDKKFMELEPEEFIEN-LIKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K  +  G   +++ E    KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKKLCDLKGLE-LYVIEPFTYKSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I+L K GVY        +  Y G+ + G NPT+  NG
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNGEI-YKGITSVGNNPTV--NG 248

Query: 255 P-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 249 KNTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|126696796|ref|YP_001091682.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9301]
 gi|126543839|gb|ABO18081.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9301]
          Length = 307

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 153/292 (52%), Gaps = 5/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++   + +  L  P  +  I
Sbjct: 16  IAIGSFDGLHAGHRKLIKSVVEDNLYTP-TIASFWPHPREVLYKETRL-RLDLPEEKLPI 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   L+   F  E +  SAE+F++ +L+  L+ K +  G  F+FG  R GD   ++
Sbjct: 74  LEDLGIEQLVLIPFDKELSKLSAERFVRDILINQLQAKNISVGANFKFGFKRRGDINTIK 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              +      + I  +  +K   +SSS IR  L K  + NA  +L   ++    V+ G+ 
Sbjct: 134 NMIKDTDIK-LKITPILEDKEGRISSSRIRDLLEKSDLKNAFKILNRPYSFNGKVVKGKG 192

Query: 202 IGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQT-SYSGVANFGRNPTMVPNGPLLLE 259
           IG+++G+PTAN+++     L  EGVYA     ++       + N G  PT+ P  P  +E
Sbjct: 193 IGKSIGWPTANLEIDGRKFLPGEGVYAAWTTIENSNKKIESIMNLGSQPTINPLLPSAVE 252

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + +   ++YG   +V   + LR +IKF +I++L   +  D++ A  I ++
Sbjct: 253 VHLINKDIDLYGLNLSVVPVEKLRSQIKFNNIKQLASQIKNDKENALGIFKN 304


>gi|323144576|ref|ZP_08079165.1| riboflavin biosynthesis protein RibF [Succinatimonas hippei YIT
           12066]
 gi|322415652|gb|EFY06397.1| riboflavin biosynthesis protein RibF [Succinatimonas hippei YIT
           12066]
          Length = 318

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 20/304 (6%)

Query: 19  GGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTIIQSSSP--IFTL 72
           G  +AIGNFDG H GH  ++    E+A K    S + +  F P P      + P  +++L
Sbjct: 16  GVALAIGNFDGFHKGHQAVIAAMREKAFKFGLKSAVMI--FEPQPLEFFAKAVPARLYSL 73

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                + K  ++ G   +    F       S  +F+  +LV+ L VK++  G+ F FGK 
Sbjct: 74  RD---KLKAFKEAGVDIVFCMPFKKSFCQMSDREFVLDLLVKKLGVKSITVGSLFTFGK- 129

Query: 133 RAGDRGI--LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             G  GI  L+   ++ G     I  +  + ++ VSS+ IR  +  G    A + +G  +
Sbjct: 130 -GGVSGIEELKALAKEAGIEAGAISGVAPSGTR-VSSTMIRALIQSGDFTTAKNEIGRPY 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG  +GRTLGFPTAN+ L+  +    GVYA++ +T     + G+AN G  PT 
Sbjct: 188 SISGKVLHGNALGRTLGFPTANINLNRIVCPLVGVYAVKVKTL-YGMFKGMANVGIRPT- 245

Query: 251 VPNGPL--LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V  G L  LLE  +F+F+ ++YGQ   V F   +R E KF D+  LK  +  D K A  +
Sbjct: 246 VEKGRLKNLLEVNLFNFNADLYGQEIEVFFVKKIRDEKKFDDLNSLKEQLHADRKTAMTL 305

Query: 309 LESS 312
           LE+S
Sbjct: 306 LENS 309


>gi|295110269|emb|CBL24222.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus obeum
           A2-162]
          Length = 310

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 18/289 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L    V +G FDGIH GH  ++   +  K        V++F    + I  S         
Sbjct: 13  LTKSAVTLGKFDGIHRGHRKLIRTILERKKEYGELAVVMAFVSDRQMIFTSEE------- 65

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +   L KMG   L+      E  +  AE FI+++L   L+ + V+ G  FRFG +R 
Sbjct: 66  ---RRTYLAKMGVDVLLECPLNDEIKHMKAENFIRQILKGDLQAECVVVGEDFRFGYERK 122

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G   +LQK GEKY + TV I +     S+ +SS+ IR  L KG++     LLG  F +  
Sbjct: 123 GTPELLQKFGEKYEYETVVISK-EMEGSRKISSTYIREELKKGNMEKIRDLLGRPFCVSG 181

Query: 195 DVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            + HG  +G    FPTAN+ + P   ++   GVY      +D   Y G+ N G  PT V 
Sbjct: 182 RIEHGRGLGHRDFFPTANI-IPPKSKLMPPNGVYVTMSHFED-GDYPGITNVGYKPT-VG 238

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              L +E+ +FD   ++YG+ CTV F+ + RPE KF   E LK  + +D
Sbjct: 239 ESFLGVETNLFDCDLDLYGRECTVDFYKFTRPEQKFTSFEALKAQIRKD 287


>gi|116492659|ref|YP_804394.1| FAD synthase [Pediococcus pentosaceus ATCC 25745]
 gi|116102809|gb|ABJ67952.1| FAD synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 314

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 22/298 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSS---SPIFTLSPPS 76
           +A+G FDG+H GH  +++QA + A    + V  ++FN H   + +     SP+  L+   
Sbjct: 22  LALGFFDGVHRGHQAVIKQACQKAREQHLKVAAMTFNHHASVVFEQDRNFSPLSYLTSVE 81

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +++ ++G   L    FT    + S E F+Q+ +V+ L  K V+ G  + FG     +
Sbjct: 82  RKAELMRELGVDILYVVDFTSAFGSLSPEDFVQQYMVD-LNAKVVVAGFDYTFGPAELAN 140

Query: 137 RGILQKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              L    +   F  + + +  L+N+K   + S  IR  ++ G++ +A   LGY F    
Sbjct: 141 MDTLPALAQGR-FEVIKVSKIILKNDK---IGSDKIREMVSLGNIDDANAYLGYAFQTSG 196

Query: 195 DVIHGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+HGE  GR LGFPTAN+     Q++P I    G+Y +  +   Q  Y G+A+ G+N  
Sbjct: 197 VVVHGEARGRELGFPTANIVSNENQITPGI----GIYVVEIKVGGQW-YKGMASVGKNVV 251

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                P+  E  I DF + IYG+   V ++  LR EIKF  ++ L   + +DE   R+
Sbjct: 252 FGEGRPVTTEINILDFKEAIYGETVKVKWYHRLRGEIKFDSVDALIEQLHQDEADTRE 309


>gi|163783125|ref|ZP_02178120.1| riboflavin kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881805|gb|EDP75314.1| riboflavin kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 315

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 148/292 (50%), Gaps = 13/292 (4%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +GNFDG+HLGH  ++    + A    +   V++F PHP  ++   +P   L   S  E+ 
Sbjct: 31  VGNFDGVHLGHRYLVSTLKERARERGLKTMVVTFCPHPLKVL---APRLFLCELSTAEEK 87

Query: 82  LEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +E +      L   +F  E +  SA+ F+++++   L  + ++ G  +RFG  R G+  +
Sbjct: 88  MELLRGDIDYLCFIRFDREFSQMSAKDFLEEIIHRRLGCRYLLVGYDWRFGYRREGEIEL 147

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            ++ GEK GF        + N   IVSS+ +R  L +  +  A   LG R+ I   V+ G
Sbjct: 148 AREIGEKLGFEVELATPFKKN-GHIVSSTLVRRLLGEARLREAEEFLGRRYWIRRRVVKG 206

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +  G  +GFPTAN++ + ++ LKEGVYA+            VAN G  PT       +LE
Sbjct: 207 DGRGSRIGFPTANLKDTENLCLKEGVYAVLV----DDRLPAVANLGYRPTF-DGKKKVLE 261

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             I  FS ++ G+   V F ++LR E KF  +E+LK  + +D + A  +  S
Sbjct: 262 VHIPGFSGDLKGKSIKVDFVEFLREERKFSGVEELKAQIEKDIQSALAVASS 313


>gi|327461403|gb|EGF07734.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK1]
 gi|327474038|gb|EGF19451.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK408]
 gi|327489261|gb|EGF21054.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1058]
          Length = 310

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 145/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P   L   S +++I  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRIAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +T G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETITVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDSIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|332981618|ref|YP_004463059.1| riboflavin biosynthesis protein RibF [Mahella australiensis 50-1
           BON]
 gi|332699296|gb|AEE96237.1| riboflavin biosynthesis protein RibF [Mahella australiensis 50-1
           BON]
          Length = 323

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 6/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDGIHLGH  +++     A+       + +F+ HP  ++        L     +
Sbjct: 16  VMAIGTFDGIHLGHQQLIKTLKDKASLYKCASAIYTFDRHPLNVLCPDKTPALLMNNKQK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G   +I  +F    A+  A++F+  +L    +VK+VI G  F FG    G+  
Sbjct: 76  LSVLRQYGIDYVILNEFNKAFADTPADKFVNNILFGLYDVKSVIVGFDFTFGYKGQGNAQ 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  G K G   V +  ++ N    VSSS IR  ++ G V  AA  LG  F +  +V  
Sbjct: 136 LLKDEGRKRGIDVVIVPPVKVN-GITVSSSLIRRLVSDGCVEEAACYLGRPFALLGEVHT 194

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPL 256
           G KIG  LGFPTAN+   P++++ + GVYA           +  V N G  PT   +  +
Sbjct: 195 GHKIGHKLGFPTANLTPDPEVVVPRRGVYATEVVISGMEGIWKAVTNIGTRPTF-NDTHI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E+ I D+   +YG+   + F   LR E+ F   ++L   + ED  +AR++LE+
Sbjct: 254 SVETHILDYGGWLYGRELEIRFISRLRDEMSFSSPKQLVRQIREDIDRAREVLEN 308


>gi|51892664|ref|YP_075355.1| riboflavin kinase/FMN adenylyltransferase [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856353|dbj|BAD40511.1| riboflavin kinase/FMN adenylyltransferase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 330

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 30/321 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
            +P    G ++AIG +DG+HL H  IL   +  A         + F+P P  +++  +  
Sbjct: 9   DVPVRGTGNLIAIGKWDGVHLAHQAILRALVAEARRVGGQAVAVGFHPLPMQVLRPEA-- 66

Query: 70  FTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
              +PP +Q      +++  +G    +   F    A+ + E F+ +VLV  L  + V+ G
Sbjct: 67  ---APPMLQSLEERAELMAALGVDVHLALPFDRALADMTPEAFVHQVLVGQLRAQQVMVG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               FG+   G    +++     G        +R +  + VSS+ +R A+ KG +  AA 
Sbjct: 124 FNNTFGRGGKGTAETMRQLCTPLGIPVHIFQPVRAD-GENVSSTEVRFAVAKGRMQAAAR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS------ 237
           LLG  + +   V+ G++ GR LG+PTAN++L    LL   GVY  R     +        
Sbjct: 183 LLGRPYAVRGLVVQGDRRGRELGYPTANIRLEEGRLLPPHGVYTARVTVLGEPRKLQPPV 242

Query: 238 ---------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                    Y  + N G  PT V    L  E+ +FDF  ++YG+   V F +Y+RPE  F
Sbjct: 243 TVTPRTGPVYGAMLNLGVRPT-VGGTELRCEAHLFDFRGDLYGRELQVEFLEYMRPERAF 301

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
            +++ L   +  DE+ AR+ L
Sbjct: 302 PNLDALVAQLRADERAAREFL 322


>gi|117928718|ref|YP_873269.1| riboflavin kinase / FMN adenylyltransferase [Acidothermus
           cellulolyticus 11B]
 gi|117649181|gb|ABK53283.1| FMN adenylyltransferase [Acidothermus cellulolyticus 11B]
          Length = 337

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 32/316 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H GH  IL  A + A+ +   +  ++F+P P  +++  +    L+  + +
Sbjct: 26  VVSIGVFDGVHRGHQKILAAARRHADETGRALLAVTFDPIPERVLRPQAAPPLLATTARR 85

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE+     +   +FT E A  + +QF++ VL + L+   V+ G  FRFG   +GD  
Sbjct: 86  LALLEQAQVDGVYLVEFTTEFAALTPDQFVKTVLADGLDASAVVVGANFRFGHRASGDVT 145

Query: 139 ILQKRGEKYGFHTVFIDEL--------------------RNNKSQIVSSSNIRTALTKGH 178
            L     ++G+    +D L                    R  +   VSSS IR  +  G 
Sbjct: 146 TLTHHAGQFGYAVEAVDLLTLAVPAEPTDDAHAAAQDDPRPAELVTVSSSWIRQQIAAGW 205

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS 237
           V  AA  LG    +E +V HG++ GR+LG+PTAN+ ++ D+ L  +GVYA          
Sbjct: 206 VARAAVALGRPHRLEGEVQHGDRRGRSLGYPTANLAVAGDLALPADGVYAGWL-----DG 260

Query: 238 YSGVANFGRNPTMVPNGPL-LLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + G NPT    G +  +E+++ D    + YG+  TV F   +R  ++F  +++L+
Sbjct: 261 MPAAISVGTNPTF--GGTVRRVEAYVLDRDDLDYYGKSVTVDFARRIRGMVRFAQVDELR 318

Query: 296 IYMGEDEKKARKILES 311
             M +D  + R IL +
Sbjct: 319 RQMDDDVARCRDILRT 334


>gi|261367195|ref|ZP_05980078.1| riboflavin biosynthesis protein RibF [Subdoligranulum variabile DSM
           15176]
 gi|282570793|gb|EFB76328.1| riboflavin biosynthesis protein RibF [Subdoligranulum variabile DSM
           15176]
          Length = 310

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 1   MHVFHNIEINQSLPNH-LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN--- 56
           M ++H +      P H  +G  VA+G FDG+H GH ++L  A++ A  + +T  +F    
Sbjct: 1   MQIYHTMT-----PVHTAQGCAVALGYFDGVHCGHRMVLGSAVRYAAENGLTPAAFTFEL 55

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKI-LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P  +T+         LSP  +Q+ I +E +G    +   F     + S E F+QKVLV+ 
Sbjct: 56  PGNQTLKGGR----ILSP--VQKHIRIESLGIEQYLEPPFE-AFRDLSPEDFVQKVLVDC 108

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
              K V  G  F FG   AGD  +L    E  G  +V I  +    +Q VSS+ IR AL 
Sbjct: 109 FRAKAVFCGKNFTFGARAAGDVEMLHALCEPRGI-SVHIVPMAQYGAQAVSSTRIRAALE 167

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK-EGVYAIRFRTQ 233
           +G + +A  +LG  + I+  V HG+ +G + LG PT N    PD L    GVY  R    
Sbjct: 168 EGRLDDANAMLGAPYAIDWTVTHGKGVGTSRLGTPTVNQNYPPDALQPCTGVYLTRI-LL 226

Query: 234 DQTSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           D   +      GR PT+    N  +  E+++ DFS  +YGQ   + F  Y  P  KF+ +
Sbjct: 227 DGHWWPAATGIGRRPTVDDSANAAVTCETYVPDFSGNLYGQNPVLEFHRYFCPVRKFRTL 286

Query: 292 EKLK 295
           ++L 
Sbjct: 287 QELS 290


>gi|153003538|ref|YP_001377863.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. Fw109-5]
 gi|152027111|gb|ABS24879.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. Fw109-5]
          Length = 322

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 164/333 (49%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHH--LILEQAIKIANNSPITVLSFNPH 58
           M V  ++E  ++    L+G  VA+GNFDG+HLGH   + L +A+     +   VL+F PH
Sbjct: 1   MDVHRSLEEARA-AGRLRGCAVAVGNFDGVHLGHQRLIALARALAHPRGAAAAVLTFEPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQE-----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           P  +++ S     L+PP +       ++L   G  A++   F L  A   A  F+ + LV
Sbjct: 60  PVRVLRPS-----LAPPLLATLPRKLELLAAAGADAVVLQPFDLPYAATPASAFVARDLV 114

Query: 114 EWLEVKTVITGTKFRFGKDRA---GDRGILQKRGEK-YGFHTVFIDELRNNKSQIVSSSN 169
             L    V+ G  F  G +RA     R +L   G + +    V ID L      +VSS+ 
Sbjct: 115 GGLGCSDVVVGYDFTAGHERARVDALRPLLAAHGVRLHVVEPVTIDGL------VVSSTK 168

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           +R  L +G+V  AA LL     ++  V  G   GR  GF TAN+Q +  +L   GVYA+R
Sbjct: 169 VREFLLEGNVEAAALLLTRPHDVDGIVARGAGRGRGFGFATANVQTAA-LLPANGVYAVR 227

Query: 230 FRTQDQTS---------YSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFF 279
                Q           + GV N G  PT+  N  L  E+ +FDF  +++YG+R  V+F 
Sbjct: 228 AWLGGQPGPQGLEGAALHEGVCNVGVKPTVEANAALTAEAHLFDFMGRDLYGERIRVAFV 287

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LR E +F  ++ L+  + ED  +AR++L  +
Sbjct: 288 ARLRDERRFASVDALRAQIAEDAARARELLAQA 320


>gi|148380369|ref|YP_001254910.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932766|ref|YP_001384589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936853|ref|YP_001388105.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A str. Hall]
 gi|170759316|ref|YP_001787725.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A3 str. Loch Maree]
 gi|148289853|emb|CAL83961.1| putative riboflavin biosynthesis protein RibC [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928810|gb|ABS34310.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932767|gb|ABS38266.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           Hall]
 gi|169406305|gb|ACA54716.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A3 str.
           Loch Maree]
 gi|322806680|emb|CBZ04249.1| riboflavin kinase [Clostridium botulinum H04402 065]
          Length = 306

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 159/291 (54%), Gaps = 10/291 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP-RTIIQSSSPIFTLSPPSIQ 78
           +A+G+FDG+H GH  ++++  K+A  N     VL+F  HP  TI +  +P   L  PS +
Sbjct: 18  IALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKDHPLNTINKDLAPKILLDNPS-K 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KIL++     +    F  E      E FI+K ++ +      + G  +RFG    GD  
Sbjct: 77  VKILKENEVDLVNFINFDKEYMKLCPEDFIKK-MIYYYNAGGFVVGFNYRFGYKNLGDIE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK-GHVLNAAHLLGYRFTIESDVI 197
           +L K  +K+ F+   +  ++   ++I+SSS IR  L + G+V  A  +LG  + ++ +++
Sbjct: 136 LLDKMSKKFNFNLKVVSPVKY-LNEIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGNIV 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+++GR LG+PT N+  +   +L + GVY      +++  Y G+ N G NPT V +  L
Sbjct: 195 KGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKL-YKGITNVGYNPT-VEDKKL 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 253 NIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKNQLKKDKSFAKR 303


>gi|194467751|ref|ZP_03073737.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri 100-23]
 gi|194452604|gb|EDX41502.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri 100-23]
          Length = 315

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 151/295 (51%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDG+H GH  ++++A +IA     P+ VL+++  P  + +     F  LS  + 
Sbjct: 21  VLAMGFFDGVHRGHQAVIKRAREIAREKGLPLVVLTYDHAPGIVYRQYKGGFKYLSTVNR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L  +    +    FT   A+ S +QF+ + LV +   +TV+ G    +GK+     
Sbjct: 81  KLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF-HAQTVVAGFDHTYGKEDIASM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            +L K      F  V + +   N SQ  V S  IR  +  G+V  A   LGY +     V
Sbjct: 140 KLLPKYAAGR-FEVVTVPKFTENGSQEKVGSREIRKLIDAGNVEAANQALGYPYQTTGLV 198

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRTLGFPT N++   +  +   GVYA++ +   +  Y G+A+ G N T      
Sbjct: 199 VHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVKL-GKKWYDGMASVGHNITFGDANQ 257

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L +E  +FDF Q +YG+   V ++ YLR E KF   + L   M +DE+ AR ILE
Sbjct: 258 LTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADALVTQMKQDEQNARHILE 312


>gi|239944695|ref|ZP_04696632.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
          Length = 288

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 137/275 (49%), Gaps = 9/275 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  K VI G  FR
Sbjct: 68  PPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHAKAVIEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G  Y +    ID     ++   Q  SS+  R  + +G V  AA +
Sbjct: 128 FGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIAEGDVAGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D  S     + 
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-DGESMPAAISV 246

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
           G NP         +E++  D    ++YG    V F
Sbjct: 247 GTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDF 280


>gi|325689916|gb|EGD31920.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK115]
          Length = 310

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 145/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPESPKLSFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P+  L   S ++++  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPVLMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAAGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|291448155|ref|ZP_06587545.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
 gi|291351102|gb|EFE78006.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
          Length = 312

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 137/275 (49%), Gaps = 9/275 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  +++  S 
Sbjct: 32  EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPHPSEVVRPGSH 91

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  K VI G  FR
Sbjct: 92  PPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHAKAVIEGPNFR 151

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G  Y +    ID     ++   Q  SS+  R  + +G V  AA +
Sbjct: 152 FGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIAEGDVAGAAEI 211

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D  S     + 
Sbjct: 212 LGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-DGESMPAAISV 270

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
           G NP         +E++  D    ++YG    V F
Sbjct: 271 GTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDF 304


>gi|319947275|ref|ZP_08021508.1| riboflavin biosynthesis protein RibF [Streptococcus australis ATCC
           700641]
 gi|319746517|gb|EFV98777.1| riboflavin biosynthesis protein RibF [Streptococcus australis ATCC
           700641]
          Length = 305

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 148/293 (50%), Gaps = 13/293 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSP--IFTLSPP 75
            V+ +G FDG+H GH  +   A  IA+     + VL+F   P+       P  +  L  P
Sbjct: 18  AVLVLGYFDGLHRGHQELFRTARAIADEQGLRVAVLTFPESPKLAFARYQPELLLHLQNP 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K +E++G   L    FT + A ++AE+F+   L   L  + ++ G  + FG D+  
Sbjct: 78  EERFKRMEELGVDDLYLIDFTSDFAAHTAEEFVATYLTR-LRARVLVAGFDYSFGSDKK- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +    G  +    + +  + +   +I SS+ IR A+  G V  AA+LLGY  +    
Sbjct: 136 ---VASDLGTYFKGQVIVVPPVLDQGEKI-SSTRIRQAIASGQVKEAANLLGYPLSSRGI 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+GFPTAN+  +    L ++GVY +      +  + G+A+ G+N T     
Sbjct: 192 VVHGDARGRTIGFPTANLAPIDRTHLPQDGVYVVEVEVLGK-RHRGMASVGKNSTF-DGT 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L  E+ IFDFS++IYG    + + D +R  +KF  +E L   + +DE  ARK
Sbjct: 250 ELRFEANIFDFSKDIYGHTIRIFWLDKIREMVKFDSVEALVEQLRQDEILARK 302


>gi|294782069|ref|ZP_06747395.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 1_1_41FAA]
 gi|294480710|gb|EFG28485.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 1_1_41FAA]
          Length = 318

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 140/286 (48%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + IK A  N+    V +F  HP   +        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFPERKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K       Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVIMQKLDKNFLEYTPLEFV-RILKNKLKVKEIFVGFNFSFGKGGLGTAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + ++EL       ++VSSS IR  +       A  LL +   +  +VI
Sbjct: 138 LEYLAE---VHNIKVNELPPVTLDGELVSSSAIRKKIANSDFDGAIKLLDHPMIVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF +E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 MSLEVHILDFDREVYGEKLYIQIVKFMREEKKFSSIDELKATIQAD 298


>gi|221632776|ref|YP_002521998.1| riboflavin biosynthesis protein RibF [Thermomicrobium roseum DSM
           5159]
 gi|221156125|gb|ACM05252.1| riboflavin biosynthesis protein RibF [Thermomicrobium roseum DSM
           5159]
          Length = 334

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 8/296 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG+H GH  +L    + A     P   ++F+P P  ++        LS    +
Sbjct: 16  VVTIGNFDGVHRGHQYLLTTVHERAATRGLPSLAITFDPLPLEVLAPERAPQRLSLTDQR 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++   G   ++  +F    A  S ++F+  +LV+   + T++ G  F FG+ R GD  
Sbjct: 76  LRLILACGIDRVLLVQFDRSFAALSPKEFVD-LLVQSTHLTTIVVGEDFHFGRGRTGDPA 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++ G  +GF  V +  L +  S+ +SS+ IR  +  G V  A  LLG  + +   V+ 
Sbjct: 135 LLRELGRSHGFEVVVLPRL-SELSETISSTRIRQLIAAGAVREAGTLLGRPYALTGTVVA 193

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   G  LGFPTAN+ ++  ++L  +G+YA        + Y  +A  G  PT  P     
Sbjct: 194 GTGRGSQLGFPTANIAVADRLMLPGDGIYAA-IAHLSGSWYPALAYIGSRPTF-PGAGHA 251

Query: 258 LESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +E ++ D +   + G+  TV F + +RP+  F D E L   M +DE+  R +L+++
Sbjct: 252 VEVYLIDQTYPTLRGETITVYFIERIRPDRAFPDAEALVEQMRDDERNGRAVLQAA 307


>gi|270290308|ref|ZP_06196533.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici 7_4]
 gi|270281089|gb|EFA26922.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici 7_4]
          Length = 315

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 19/297 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT----LSP 74
           V+A+G FDG+H GH  ++++A +IAN     +  ++F+ H   +       F+    L+ 
Sbjct: 21  VLALGFFDGMHRGHQAVIQKAREIANAKGLALAAMTFDHHASVVFPKPQHRFSALSYLTS 80

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S + +++E  G   L    FT    + + ++F+ + +V  L  + V+ G  + FG    
Sbjct: 81  VSRKAELMEATGVDILYVVNFTSAFGSLTPQEFVDQYMV-GLNAEVVVAGFDYTFGPVAT 139

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +   L +  + + F  V + ++   + Q + S+ IR A+  G +  A   LGY F    
Sbjct: 140 ANMDTLPEIAQ-HRFEVVKVPKIIA-QGQKIGSTAIRNAVADGEIDEANRYLGYPFETNG 197

Query: 195 DVIHGEKIGRTLGFPTANM-----QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+HGE  GRTLGFPTAN+     Q++P I    G+Y +  +  D+  Y G+A+ GRN  
Sbjct: 198 LVVHGEARGRTLGFPTANIVSNPNQITPGI----GIYVVEIKIADKW-YQGMASVGRNVV 252

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                P+  E  I DF+QEIYG+   V +   LR E+KF  ++ L   + +DE   R
Sbjct: 253 FGDGRPVTTEINILDFNQEIYGETVRVKWHHRLRGEVKFASVDALIAQLHQDEADTR 309


>gi|118586589|ref|ZP_01544030.1| riboflavin biosynthesis FAD synthase [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432968|gb|EAV39693.1| riboflavin biosynthesis FAD synthase [Oenococcus oeni ATCC
           BAA-1163]
          Length = 324

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 20/317 (6%)

Query: 9   INQSLPNHL----KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           IN   PN      K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  P   
Sbjct: 4   INLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQSPAGF 63

Query: 63  IQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              + P+  +   P   + ++LEK+G   +    + L   + S E ++   L + L    
Sbjct: 64  Y-VNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLAFGSQSPEDYVDNYLAK-LGASV 121

Query: 121 VITGTKFRFG--KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           V+ G    +G  KD+A  + + +    ++  +TV   E  +   +I SS+ IR  L++G 
Sbjct: 122 VVAGFDHTYGSLKDKADMKHLPRYANGRFEVYTV--GECSDYFGKI-SSTRIRRLLSEGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD--- 234
           +     LLGY+F     V+HG +IGR +GFPTAN  L    LL K GVYA+R +      
Sbjct: 179 LQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTGPL 238

Query: 235 -QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + E 
Sbjct: 239 AGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANAEA 298

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D   +  +L+
Sbjct: 299 LIDQLKQDRIDSLDLLK 315


>gi|314923880|gb|EFS87711.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL001PA1]
 gi|314966063|gb|EFT10162.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL082PA2]
 gi|314981896|gb|EFT25989.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA3]
 gi|315090760|gb|EFT62736.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA4]
 gi|315095009|gb|EFT66985.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL060PA1]
 gi|315104234|gb|EFT76210.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA2]
 gi|327328058|gb|EGE69827.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL103PA1]
          Length = 336

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 20/309 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++      
Sbjct: 38  NVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAP 95

Query: 70  FTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             L   S++ +I  L+  G S +    FT E A+++   F+ +VL   L+ + V+ G  F
Sbjct: 96  ALLC--SLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVDRVLGP-LQPRHVLVGQNF 152

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG+   G    L +    +G   V   +L       VSS+ +R  +  G V  AA LLG
Sbjct: 153 RFGRHAVGTPDALAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLG 208

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS----GVA 242
             F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA                   
Sbjct: 209 RPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAI 268

Query: 243 NFGRNPTMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + G NPT   +G    +E+++ D    E+YG    V+F + LR +IKF  IE L   M +
Sbjct: 269 SVGTNPTF--DGVERRVETYVIDRDDLELYGVDIAVTFAERLRGQIKFDGIEPLISQMAD 326

Query: 301 DEKKARKIL 309
           D + A+++L
Sbjct: 327 DVETAKRVL 335


>gi|254303699|ref|ZP_04971057.1| riboflavin kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323891|gb|EDK89141.1| riboflavin kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 319

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++++ IK A  N     V +F  HP  ++        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLIKETIKAARENGKQAVVFTFEKHPMEVLFPERKFEYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K   E   Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVIMQKVNQEFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKVED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A   L +   +  +VI
Sbjct: 138 LEYLAE---VHNIKVTELPPVTLDGELVSSSAIRKKIANSDFEGAIKFLDHPMLVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGDKNSKVLYGVVNVGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE+ I DF++E+YG++  +    ++R E KF  +++LK  +  D
Sbjct: 253 ISLEAHILDFNREVYGEKVYIQIVKFMRKEKKFSSVDELKATIQAD 298


>gi|322385465|ref|ZP_08059109.1| riboflavin biosynthesis protein RibF [Streptococcus cristatus ATCC
           51100]
 gi|321270203|gb|EFX53119.1| riboflavin biosynthesis protein RibF [Streptococcus cristatus ATCC
           51100]
          Length = 308

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 151/307 (49%), Gaps = 18/307 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           + +EINQ      +  V+ +G FDG+H GH  + ++A KIA      I VL+F   P+  
Sbjct: 9   NELEINQE-----EDTVLVLGYFDGLHKGHQTLFKEARKIAAEQGLKIAVLTFPESPKLA 63

Query: 63  IQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                P  +  L+ P  +   LE +G   L    FT   +  +A +F  K  V  L+ K 
Sbjct: 64  FVRYQPELMLHLNHPEERAAHLENLGVDYLYLIDFTSHFSKNTAREFFDK-YVSALKAKA 122

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  + FG D+       ++  + +    V +  + N   + +SS+ IR  +  G V 
Sbjct: 123 VVAGFDYHFGSDKRK----AEELADYFDGRIVIVSSV-NQDDEKISSTRIRETIQNGDVA 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYS 239
            A  LLGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +      +  + 
Sbjct: 178 KAHQLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVEHNGKI-FR 236

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+A+ G+N T      L  E+ +FDF++EIYG    + + D +R  +KF  IE+L   + 
Sbjct: 237 GMASVGKNVTF-EGDELRFEANLFDFAEEIYGDTIRIIWLDKIRDMVKFDGIEELVTQLK 295

Query: 300 EDEKKAR 306
            DE+ AR
Sbjct: 296 SDEEVAR 302


>gi|222111904|ref|YP_002554168.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Acidovorax
           ebreus TPSY]
 gi|221731348|gb|ACM34168.1| riboflavin biosynthesis protein RibF [Acidovorax ebreus TPSY]
          Length = 347

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 40/343 (11%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P+      + IGNFDG+H GH  +L      A +  +   VL+F PHPR           
Sbjct: 10  PDVASACALTIGNFDGVHRGHQAMLALLNSEAQHRGVQSCVLTFEPHPRDYFAGVHKRPD 69

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  L + G    I   F  + A  + + FI  V+V  L  + ++ G  
Sbjct: 70  LAPARIGTLRDKLSELARCGVQQTIVLPFNEKLARQAPQAFIDDVVVGGLGARYLLVGDD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNA 182
           FRFG  RAGD  +L   G + GF        R N  ++    VSSS +R AL  G +  A
Sbjct: 130 FRFGAQRAGDYAMLDTAGRERGFEVA-----RMNSYEVHGLRVSSSAVRDALGAGDMEEA 184

Query: 183 AHLLGYRFTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILLKEGVYAIRFR 231
             LLG  + I   V+HG K+GR+L           GF T N++ +       G++A+   
Sbjct: 185 TRLLGRPYAISGHVVHGRKLGRSLGRSAASGPHQDGFRTLNLRFAHWKPAASGIFAVLVH 244

Query: 232 TQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDF-----SQEIYGQRCTVSFFDYL 282
             D     GVAN G  P++ P+    G +LLE+    +     ++  YG+   V     L
Sbjct: 245 GLDAEPLPGVANLGVRPSLDPSDVNGGRVLLETHCLQWPAHLGAEGAYGKIVRVELLHKL 304

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE----RDRI 321
             E+K+  +  L   + +D   AR    SS+  +     RDRI
Sbjct: 305 HDELKYDSLGALTTGIAKDCDDARAYFASSHAETRRQTTRDRI 347


>gi|121595698|ref|YP_987594.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Acidovorax
           sp. JS42]
 gi|120607778|gb|ABM43518.1| FMN adenylyltransferase [Acidovorax sp. JS42]
          Length = 347

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 157/353 (44%), Gaps = 47/353 (13%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRT 61
           FH+ E+  +         + IGNFDG+H GH  +L      A +  +   VL+F PHPR 
Sbjct: 7   FHHPEVAPAC-------ALTIGNFDGVHRGHQAMLALLNSEAQHRGVQSCVLTFEPHPRD 59

Query: 62  IIQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                     L+P  I   ++K+  L + G    I   F  + A  + + FI  V+V  L
Sbjct: 60  YFAGVHKRPDLAPARIGTLRDKLSELARCGVQQTIVLPFNEKLARQAPQAFIDDVVVGGL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRT 172
             + ++ G  FRFG  RAGD  +L   G + GF        R N  ++    VSSS +R 
Sbjct: 120 GARYLLVGDDFRFGAQRAGDYAMLDTAGRERGFEVA-----RMNSYEVHGLRVSSSAVRD 174

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILL 221
           AL  G +  A  LLG  + I   V+HG K+GR+L           GF T N++ +     
Sbjct: 175 ALGAGDMEEATRLLGRPYAISGHVVHGRKLGRSLGRSAASGPHQDGFRTLNLRFAHWKPA 234

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDF-----SQEIYGQ 272
             G++A+     D     GVAN G  P++ P+    G +LLE+    +     ++  YG+
Sbjct: 235 ASGIFAVLVHGLDAEPLPGVANLGVRPSLDPSDVNGGRVLLETHCLQWPAHLGAEGAYGK 294

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE----RDRI 321
              V     L  E+K+  +  L   + +D   AR    SS+  +     RDRI
Sbjct: 295 IVRVELLHKLHDELKYDSLGALTTGIAKDCDDARAYFASSHAETRRQTTRDRI 347


>gi|320528346|ref|ZP_08029508.1| riboflavin biosynthesis protein RibF [Solobacterium moorei F0204]
 gi|320131260|gb|EFW23828.1| riboflavin biosynthesis protein RibF [Solobacterium moorei F0204]
          Length = 308

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 145/292 (49%), Gaps = 9/292 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+HLGH  +++  + +A  +N    +++F P P   I+    +  ++    +
Sbjct: 19  CACIGYFDGMHLGHQALVKATVALAEKHNCESALITFEPDPWVTIKGLKDVKHITTMRQR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
                ++G   +I   F  E +  S   FI K L + L +K ++ G  F +G   AGD  
Sbjct: 79  INRAVELGIQNIIILDFDKEMSELSPADFIHKTLAK-LNLKGIVCGFDFHYGLHGAGDCN 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+   +        +++        +SS+ I  A+ +G +     +LG  +++E  V  
Sbjct: 138 TLKSETDYDVVVVDAVEDEVGK----ISSTRICDAIVQGDMPAIKKMLGQYYSLEGIVRR 193

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GR +GFPTAN++ S + LL KEGVYA      D   Y  + N G NPT   +  L 
Sbjct: 194 GHQQGRLMGFPTANIEYSDEYLLPKEGVYASMVEI-DHHVYGAMTNLGHNPTFNTSEKLS 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE++I  +S  +YG+   V   +YLRPEI FK  E L + + +D +  +KIL
Sbjct: 253 LETYIIGYSGTLYGRILKVQLLEYLRPEIHFKSRENLILQLEQDVRDIKKIL 304


>gi|116491305|ref|YP_810849.1| FMN adenylyltransferase / riboflavin kinase [Oenococcus oeni PSU-1]
 gi|116092030|gb|ABJ57184.1| FMN adenylyltransferase / riboflavin kinase [Oenococcus oeni PSU-1]
          Length = 324

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 20/317 (6%)

Query: 9   INQSLPNHL----KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           IN   PN      K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  P   
Sbjct: 4   INLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQSPAGF 63

Query: 63  IQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              + P+  +   P   + ++LEK+G   +    + L   + S E ++   L + L    
Sbjct: 64  Y-VNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLTFGSQSPEDYVDNYLAK-LGASV 121

Query: 121 VITGTKFRFG--KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           V+ G    +G  KD+A  + + +    ++  +TV   E  +   +I SS+ IR  L++G 
Sbjct: 122 VVAGFDHTYGSLKDKADMKHLPRYANGRFEVYTV--RECSDYFGKI-SSTRIRRLLSEGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD--- 234
           +     LLGY+F     V+HG +IGR +GFPTAN  L    LL K GVYA+R +      
Sbjct: 179 LQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTGPL 238

Query: 235 -QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + E 
Sbjct: 239 AGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANAEA 298

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D   +  +L+
Sbjct: 299 LIDQLKQDRIDSLDLLK 315


>gi|255524224|ref|ZP_05391183.1| FAD synthetase [Clostridium carboxidivorans P7]
 gi|255512049|gb|EET88330.1| FAD synthetase [Clostridium carboxidivorans P7]
          Length = 277

 Score =  135 bits (340), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 8/255 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDGIH+GH  ++ + IK+A  N +   + +F  HP ++I        +   S + 
Sbjct: 18  IALGSFDGIHIGHVSLVNKTIKLARKNQAKSMIFTFKNHPLSVINKEIAPKIIMDNSNKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++LE  G  A+    F  E    S E FI   LV     K ++ G   RFG    GD  +
Sbjct: 78  EVLESFGLDAINMANFDKELMMLSPEDFILN-LVSHYRAKGIVVGFNNRFGYKNLGDVEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT-KGHVLNAAHLLGYRFTIESDVIH 198
           L+K  +KY F    +D ++  K+Q+VSSS IR  ++ +G +   + +L   F ++ +V+ 
Sbjct: 137 LKKLSKKYSFDLCVVDPVKY-KAQVVSSSVIRNVISDEGDMKKVSKMLTRPFMLQGNVVK 195

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GRTLGFPT N+      +L + GVY    + +D+  + G+ N G NPT V +  L 
Sbjct: 196 GKQLGRTLGFPTVNLNYDKRFVLPRGGVYYTVVKYEDKF-FRGITNVGYNPT-VEDNKLS 253

Query: 258 LESFIFDFSQEIYGQ 272
           +E+ I DFS+ IY +
Sbjct: 254 VETHILDFSENIYNK 268


>gi|227544945|ref|ZP_03974994.1| FAD synthetase [Lactobacillus reuteri CF48-3A]
 gi|300910024|ref|ZP_07127484.1| FAD synthetase [Lactobacillus reuteri SD2112]
 gi|227185056|gb|EEI65127.1| FAD synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892672|gb|EFK86032.1| FAD synthetase [Lactobacillus reuteri SD2112]
          Length = 315

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDG+H GH  ++++A +IA     P+ VL+++  P  + +     F  LS    
Sbjct: 21  VLAMGFFDGVHRGHQAVIKRAREIAREKGLPLVVLTYDHAPGIVYRQYKGGFKYLSTVDR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L  +    +    FT   A+ S +QF+ + LV +   +TV+ G    +GK+     
Sbjct: 81  KLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF-HAQTVVAGFDHTYGKEDIASM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            +L K      F  V + +   + SQ  V S  IR  +  G+V  A   LGY +     V
Sbjct: 140 KLLPKYAAGR-FEVVTVPKFTEDGSQEKVGSREIRKLIDAGNVEAANQALGYPYQTTGLV 198

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRTLGFPT N++   +  +   GVYA++ +   +  Y G+A+ G N T      
Sbjct: 199 VHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVKL-GKKWYDGMASVGHNITFGDANQ 257

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L +E  +FDF Q +YG+   V ++ YLR E KF   + L   M +DE+ AR+ILE
Sbjct: 258 LTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADALVAQMKQDEQNARRILE 312


>gi|302038049|ref|YP_003798371.1| riboflavin biosynthesis protein ribF [Candidatus Nitrospira
           defluvii]
 gi|300606113|emb|CBK42446.1| Riboflavin biosynthesis protein RibF [Candidatus Nitrospira
           defluvii]
          Length = 321

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 142/300 (47%), Gaps = 16/300 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV IGNFDG H GH  +L++ +  A     T  VL+F+PHP  I+     +  L+ P  +
Sbjct: 17  VVTIGNFDGHHHGHRALLDRVVATARREAGTALVLTFDPHPVKILAPQVNLMFLTTPEEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
               E  G   ++  +FT   A  S  QF ++VL + +  + +  G  F FGK RAG   
Sbjct: 77  LARFEAAGIDEVVFLEFTTAFAALSPAQFAKQVLCDGIGTRELYVGEHFAFGKGRAGRIA 136

Query: 139 ILQKRGEKYGFHT-----VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            L K G + GF       V ID       ++VSS+ IR  +  G +  A  LLG  ++IE
Sbjct: 137 DLLKLGAQLGFRVHPMAPVTID------GEVVSSTRIRQLIHAGELQKAIRLLGRPYSIE 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VI G   G  LG+PTAN++L    ++  +GVYA +  +   +  + V   G  PT   
Sbjct: 191 GTVISGAHRGTELGWPTANLRLPEGRVIPPDGVYAAQV-SWKGSGLNAVVYIGTRPTF-G 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            G  LLE  I D   E+YG+   V    ++R +  F   E L   +  D   AR  L  +
Sbjct: 249 AGERLLEVSILDERLELYGEVIRVDLLGFIREDRVFASAEALTRQIALDVDAARAQLRDA 308


>gi|330444476|ref|YP_004377462.1| riboflavin biosynthesis protein RibF [Chlamydophila pecorum E58]
 gi|328807586|gb|AEB41759.1| riboflavin biosynthesis protein RibF [Chlamydophila pecorum E58]
          Length = 308

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 153/307 (49%), Gaps = 9/307 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           ++EI+  L + +    + +G FDG HLGH  +L        +S   V++F+PHP+ ++  
Sbjct: 10  HMEISYKLASSVPIDSLTVGFFDGCHLGHQKLLSILTSYPGSS--GVITFDPHPQAVLSK 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           S  + T +P  ++  +L+K     L    F+LE A+ SAE+F+ + L   L  K +I G 
Sbjct: 68  SPKLITETPERLE--LLQKFPIDFLGILPFSLEFASLSAEEFLSE-LHSQLHCKRLILGP 124

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             R GK   G+   LQ  G+  G   V       N ++++SS  IR  L+ G +  A   
Sbjct: 125 DSRLGKGGLGNIKTLQPLGKSLGIEIVQAPSFYFN-NEVISSQKIRKMLSHGDLETAHLY 183

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG  + I   V  G  IG  LGF T N+ +  + LL  GVYA   + + QT Y  V N G
Sbjct: 184 LGRPYAICGTVTAGNGIGSRLGFATLNV-IKEECLLPYGVYACEVKHKHQT-YFAVMNLG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT V    L LE+ +F+FS  +YG+R T     +LR E KF   E+L   +  D  +A
Sbjct: 242 EAPT-VHRDSLCLEAHLFNFSGNLYGERITFFPKKFLREEKKFASKEELICAIKHDVLQA 300

Query: 306 RKILESS 312
           + +   S
Sbjct: 301 KTLFHLS 307


>gi|322389231|ref|ZP_08062792.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 903]
 gi|321144136|gb|EFX39553.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 903]
          Length = 306

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 13/296 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A +IA+   + V  L+F   P+       P  +  L  P 
Sbjct: 19  VLVLGYFDGLHLGHQELFKKARQIADEKGLKVALLTFPESPKLAFVRYQPELLLHLQSPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  + FG D+   
Sbjct: 79  DRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSFGSDKKTA 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +      +    +  +D+      + +SS+ IR A+ +G V  AA LLG+  +    V
Sbjct: 138 SDLAAYFDGQVEVISPVLDQ-----GEKISSTRIRQAILEGRVQEAARLLGHPLSSRGIV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+G+PTAN+  +    L  +GVY +    + QT Y G+A+ G+N T      
Sbjct: 193 VHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQT-YRGMASVGKNITF-DGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R   E 
Sbjct: 251 LRFEVNLFDFSGDIYGHTLTIHWLDKIREMVKFDGIDQLVAQLEEDEAVSRNWTED 306


>gi|315222694|ref|ZP_07864583.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           F0211]
 gi|315188380|gb|EFU22106.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           F0211]
          Length = 310

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 13/302 (4%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
           N+     ++  V+ +G FDG+H GH  +  +A K+A      I VL+F   P+       
Sbjct: 8   NEKDIQQIEHTVLVLGYFDGLHKGHQALFAEARKMAAEKHLKIAVLTFPESPKLAFVRYQ 67

Query: 68  P--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           P  +  L+ P  + + +E +G   L    FT + A  +AEQF +K  +  L+ K VI G 
Sbjct: 68  PSLMLHLTSPEDRLQQMENLGVDYLYLIDFTSQFARNTAEQFFEK-YISRLKAKVVIAGF 126

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            + FG DR     +     +K     V +    N   + VSS+ IR  +  G+V  +  L
Sbjct: 127 DYHFGSDRRSAEDL-----KKLFDGQVIVVPSVNFNGEKVSSTRIRETVLAGNVAESNQL 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +      +  Y G+A+ 
Sbjct: 182 LGYSLSTRGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVEHNGKV-YRGMASV 240

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G+N T      L  E+ IF+FSQ+IYG    + + D +R  +KF ++++L   +  D++ 
Sbjct: 241 GKNVTF-EGDELRFEANIFEFSQDIYGDTIRIFWLDKIRDMVKFDNVDELVKQLQVDKEI 299

Query: 305 AR 306
           AR
Sbjct: 300 AR 301


>gi|290890856|ref|ZP_06553922.1| hypothetical protein AWRIB429_1312 [Oenococcus oeni AWRIB429]
 gi|290479507|gb|EFD88165.1| hypothetical protein AWRIB429_1312 [Oenococcus oeni AWRIB429]
          Length = 324

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 20/317 (6%)

Query: 9   INQSLPNHL----KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           IN   PN      K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  P   
Sbjct: 4   INLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQSPAGF 63

Query: 63  IQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              + P+  +   P   + ++LEK+G   +    + L   + S E ++   L + L    
Sbjct: 64  Y-VNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLTFGSQSPEDYVDNYLAK-LGASV 121

Query: 121 VITGTKFRFG--KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           V+ G    +G  KD+A  + + +    ++  +TV   E  +   +I SS+ IR  L++G 
Sbjct: 122 VVAGFDHTYGSLKDKADMKHLPRYANGRFEVYTV--GECSDYFGKI-SSTRIRRLLSEGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQD--- 234
           +     LLGY+F     V+HG +IGR +GFPTAN  L    LL K GVYA+R +      
Sbjct: 179 LQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTGPL 238

Query: 235 -QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + E 
Sbjct: 239 AGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANAEA 298

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D   +  +L+
Sbjct: 299 LIDQLKQDRIDSLDLLK 315


>gi|153801864|ref|ZP_01956450.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-3]
 gi|124122575|gb|EAY41318.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-3]
          Length = 284

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 133/269 (49%), Gaps = 18/269 (6%)

Query: 49  PITVLSFNPHPRTII---QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
           P  V++F P P  +    Q+ + +  L    +Q   L K+G   L+   F    A   A 
Sbjct: 10  PSVVMTFEPQPLELFAKQQAPARLTRLRDKFVQ---LSKLGVDRLLCVNFNHHFAQLDAH 66

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV-----FIDELRNN 160
            FI+ +LV  L VK ++ G  F FGK+R G+  +LQ+ G+  GF  V      + +LR  
Sbjct: 67  TFIRDLLVTRLGVKFLVVGDDFCFGKERQGNFVLLQQAGQALGFEVVSTQSFCLQQLR-- 124

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
               VSS+ IR AL    + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   + 
Sbjct: 125 ----VSSTAIREALAADQLSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVS 180

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
              GVY +       T   GVAN G  PT V      LE   FDF   +YG++  V+   
Sbjct: 181 PVSGVYVVEAYGLGPTPVGGVANIGNRPT-VDGVRQQLEVHFFDFQGNLYGKQLEVALLH 239

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            LR E KF   E LK  +  D + AR  L
Sbjct: 240 KLRDERKFASFEALKQQIELDAEAARVWL 268


>gi|332977967|gb|EGK14711.1| FAD synthetase [Psychrobacter sp. 1501(2011)]
          Length = 355

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 146/323 (45%), Gaps = 46/323 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IGNFDG+HLGH  +L+Q    A+   +   V+ F P PR            +P  + 
Sbjct: 25  VLTIGNFDGVHLGHQAMLKQLQTSASEQQLATMVMIFEPQPREYFAQLKSDLLAAPARLT 84

Query: 79  EK-----ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            +     +L + G   ++  KF     + SA QF   +L+  L VK+++ G  F+FG DR
Sbjct: 85  SQDEKLALLSEFGIDTVVIAKFDEAFRSLSAAQFAD-MLIHHLRVKSLVLGDDFKFGHDR 143

Query: 134 AGDRGILQKRGEKYGFHTVFIDE----------LRNNKSQIVSSSNIRTALTKGHVLNAA 183
            GD   L+  G          D           L++N+   +SS+ IR  L KG +  AA
Sbjct: 144 TGDSKFLRNYGLPVTNLQTITDTQAVAEKEPLTLQDNR---ISSTRIRELLAKGDLKTAA 200

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--------- 234
           HLL   +TI  +V+ G+KIGRTL FPTAN++L+       GVY +     D         
Sbjct: 201 HLLNRDYTITGEVVGGDKIGRTLDFPTANIELNRIRPALHGVYGVDVVVLDAEGKVIPHA 260

Query: 235 ----------------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
                           + S  G AN G  P++       LE F  +FS  +YG+   V F
Sbjct: 261 FDNLANEGKTGIAGLLEYSLFGTANIGVRPSVDKPNDWRLEVFFPEFSGNLYGKTLQVRF 320

Query: 279 FDYLRPEIKFKDIEKLKIYMGED 301
             +L  E K+  +E LK  + +D
Sbjct: 321 LHHLHDERKYDGLESLKAGIQQD 343


>gi|324993135|gb|EGC25055.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK405]
          Length = 310

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 145/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +I+      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREISTEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P   L   S +++I  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRIAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +T G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETITVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDSIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|262276790|ref|ZP_06054583.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HIMB114]
 gi|262223893|gb|EEY74352.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HIMB114]
          Length = 302

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 10/298 (3%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           + K  ++ IGNFDG+H GH  IL +A K++  + +   +L+F+P+P+         F + 
Sbjct: 12  YTKNSILVIGNFDGLHKGHISILNEAKKLSKKNNLKFGLLTFDPNPKEFFLKDK-YFKIM 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + +EK+L K     LI  KF     N SA+ FI+K+L   +    +I G +F+FGK+R
Sbjct: 71  SNTEKEKLLSKNKLDFLIILKFNNSLRNKSADTFIKKILKSKISPSKIIVGKEFKFGKNR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G   +L     K  F+T   ++ + +  +I SSS IR  +  G +  A  LLG  +++ 
Sbjct: 131 TGSPSLL-----KNYFNTKIANQKKISGVKI-SSSQIRKLIQAGKISKANRLLGRNWSVI 184

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            +V  G KIGR LG+ TAN+ ++  I    GVYA R   +++  Y+G++NFG  PT+   
Sbjct: 185 GNVNSGNKIGRKLGYKTANLFINNCIQPYRGVYATRLYFKNRL-YNGISNFGIAPTLKLK 243

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +LE+ +F   + +Y ++  + FF ++R E KFK  + L   + +D   A+KIL +
Sbjct: 244 KREVLETHLFSPVKNLYKKKVKIEFFKFIRKEKKFKTKKNLTDQIKKDITIAKKILNN 301


>gi|310828061|ref|YP_003960418.1| riboflavin biosynthesis protein RibF [Eubacterium limosum KIST612]
 gi|308739795|gb|ADO37455.1| riboflavin biosynthesis protein RibF [Eubacterium limosum KIST612]
          Length = 302

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 153/292 (52%), Gaps = 11/292 (3%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
           N EIN   PN  +  V+A+G FDG+HLGH  ++   IK A   N    V++F  HP T I
Sbjct: 2   NTEIN---PN--EKIVLALGFFDGVHLGHQELINATIKKAKELNCASGVMTFAEHPLTHI 56

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +   + ++    + ++++ +G   +    F  +   YS + FI+  L++   V  ++ 
Sbjct: 57  FPAYSPWLITTNEEKVQVMKDLGIDYVFLNPFNDQLMCYSPKAFIRDYLLQKYNVAHIVV 116

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG    GD  +L + G+++ F    I     +  Q VSS+ IR  +  G V   +
Sbjct: 117 GFNYSFGFKGEGDIQMLTEFGKRFNFGVTVIPPCIID-GQSVSSTLIRELIGTGKVNEVS 175

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVA 242
             LG  ++IE  ++ G+ +G T   PTAN+++   ++L   GVY  + + + Q  + G+ 
Sbjct: 176 TFLGRDYSIEGTIVKGKGLGHTFDIPTANLKMKEKVILPSSGVYYTKIKVRGQ-EHDGLT 234

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           N G NPT   + P  +E++I+DF + IYG   T++F + +R EIKF ++  L
Sbjct: 235 NLGFNPTFEKH-PYSIETYIYDFDENIYGDYVTLTFKERIRGEIKFDNLGDL 285


>gi|289674846|ref|ZP_06495736.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae FF5]
          Length = 228

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   ++   F       SA  F++ VL++ L V+ +  G  FRFG DR GD   LQ+ G 
Sbjct: 5   GVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGT 64

Query: 146 KYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            YGF      TV ID +R      VSS+ +R AL       A  +LG  F I   V+HG+
Sbjct: 65  TYGFTVEAAQTVEIDGIR------VSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQ 118

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           K+ R LG PTAN+QL    +   GVY +     D  ++ GVAN G  PT+  +G   LE 
Sbjct: 119 KLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHLEV 177

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            + DF+ ++Y +R TV+F   LR E +F  +E LK  +  D   AR
Sbjct: 178 HLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAAR 223


>gi|161507678|ref|YP_001577632.1| riboflavin kinase [Lactobacillus helveticus DPC 4571]
 gi|160348667|gb|ABX27341.1| riboflavin kinase [Lactobacillus helveticus DPC 4571]
          Length = 320

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G FDG+HLGH  ++ +A +IA+    P+ VL+F+ HP+ I         L     +
Sbjct: 25  ILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLDEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT + +   A+ F+  V+++ L   TV+ G  + +G     +  
Sbjct: 85  ADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVIIK-LNADTVVAGFDYTYGPKETANMK 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K   K  F  V I +   N  +I  S+ IR A+ +G +  A  L+G+ + +   V H
Sbjct: 144 NLPKFA-KGRFEIVVIPKQIFNGKKI-GSTEIRQAIREGKMDLAFQLMGHHYVMSGTVGH 201

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+   S  ++ K GVYA + +   +  Y  + + G N T+     + 
Sbjct: 202 GKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNGKW-YESMTSVGYNVTIGQPEKIF 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+
Sbjct: 261 IESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQ 305


>gi|227514698|ref|ZP_03944747.1| possible FAD synthetase [Lactobacillus fermentum ATCC 14931]
 gi|227086902|gb|EEI22214.1| possible FAD synthetase [Lactobacillus fermentum ATCC 14931]
          Length = 321

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 148/296 (50%), Gaps = 10/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  ++ +A +  +    P+ VL++   P  + Q     +  L+    
Sbjct: 21  VVAMGFFDGVHRGHQAVIARAKEEAVRRQVPLAVLTYEKLPGIVYQRYEEGVHYLTTIDR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK-DRAGD 136
           +  +LE++G   +    FT +  + S E+F+   LV  +    V+ G    +GK D A  
Sbjct: 81  KLALLEQLGADLVYLVDFTAKLGSLSPEEFVSDYLVR-MHAVAVVAGFDHTYGKKDVATM 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +      ++   TV   E R  K   + SS IR  + +G V +A  LLGYR+     V
Sbjct: 140 DRLAGYAAGRFDVVTVKKQETRGAK---IGSSRIRDLIDQGRVEDANQLLGYRYQTSGIV 196

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+GFPTAN+  +P + +   GVY + F   D   Y G+A+ G N T   N  
Sbjct: 197 VHGLARGRTIGFPTANVAWNPLERIPAVGVYTVNFLV-DGHWYGGMASVGYNVTFGQNKH 255

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E ++FDF   IYG+  TVS+   LR EIKF  ++ L   +  D+  +  IL +
Sbjct: 256 KTIEVYLFDFKGNIYGEHVTVSWIQRLRGEIKFDGVDGLIDQLHADQINSLAILRN 311


>gi|213022084|ref|ZP_03336531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 239

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 4/233 (1%)

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 1   MREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 60

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF             +I SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 61  GDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALAEDNLALAESLLGHPFTISG 119

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT V   
Sbjct: 120 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGV 178

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK
Sbjct: 179 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARK 231


>gi|332295457|ref|YP_004437380.1| riboflavin biosynthesis protein RibF [Thermodesulfobium narugense
           DSM 14796]
 gi|332178560|gb|AEE14249.1| riboflavin biosynthesis protein RibF [Thermodesulfobium narugense
           DSM 14796]
          Length = 307

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 147/281 (52%), Gaps = 16/281 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FD +HLGH L+ +Q  K+  N    I+V++F PHPR   +S   I  LS  +I E
Sbjct: 17  LTIGTFDSVHLGHQLLFKQLKKMRKNKEDLISVVTFEPHPRIFFKS---IENLSLITIIE 73

Query: 80  K----ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           +    +LE +    +I  +F    +  + E+FI   L    ++ T++ G  F FG+ + G
Sbjct: 74  ERIRLLLEHV--DEVIVLQFDELLSKLTPEEFIN-FLCSNFKINTIVEGENFHFGRGKGG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++ G ++GF+ V +  L       +SSS IR  +  G +  A  LLG+ F +  +
Sbjct: 131 DVNLLKELGNRFGFN-VDVANLYIFDGVPISSSRIRRLIISGKIDEANKLLGWEFFVSGE 189

Query: 196 VIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG++IG  LGFPTAN++L    I+ + GVY+       +  Y G  N G  PT V   
Sbjct: 190 VIHGDRIGTFLGFPTANLRLPEYKIVPQSGVYSAEVEIAGE-RYLGALNIGIKPT-VGGK 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              +E  + +F   +Y +  TV F   +R EIKF  I  LK
Sbjct: 248 KRSIEVHVINFEGNLYQEVITVYFKSKIRDEIKFDSIAALK 288


>gi|325860476|ref|ZP_08173587.1| riboflavin biosynthesis protein RibF [Prevotella denticola CRIS
           18C-A]
 gi|325482003|gb|EGC85025.1| riboflavin biosynthesis protein RibF [Prevotella denticola CRIS
           18C-A]
          Length = 350

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 9/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+H GH  ++ + +  A  S +   V++F+ HPR ++Q+      L+    +
Sbjct: 45  AATIGFFDGVHRGHRFLIGRVVDEARRSGMASAVITFDRHPRQVLQADYQPELLTTLERK 104

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +      +   F    A   A +F+ +VL   L V+ ++ G   RFG DRA    
Sbjct: 105 LQLLSETQVDNTLVLHFDRSLAALPARRFMDEVLRRQLNVRKLLIGYDNRFGHDRAEGFD 164

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G+  G   V  D       + VSSS IR  + +G + +A  LLGY +TIES ++ 
Sbjct: 165 DYVRYGQALGIEVVRADAFLPGGEK-VSSSVIRDRIRRGDIASANRLLGYAYTIESTIVR 223

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGP 255
           G   G  LGFPTAN+ ++    ++   GVYA+  R +D + +  G+ N G  PT   NG 
Sbjct: 224 GYGNGHRLGFPTANLDMAACRQLIPAAGVYAVAVRQKDSSEWRRGMMNIGTRPTF--NGK 281

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +E  IF F  +IY +   VSF   +R E +F  +E L   + +D +    + ++
Sbjct: 282 AMSMEVNIFRFDGDIYDKPLAVSFIAKIRDERRFGSLEALAHQLEQDREAINHLFDA 338


>gi|58337531|ref|YP_194116.1| riboflavin kinase [Lactobacillus acidophilus NCFM]
 gi|227904172|ref|ZP_04021977.1| FAD synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|58254848|gb|AAV43085.1| riboflavin kinase [Lactobacillus acidophilus NCFM]
 gi|227868191|gb|EEJ75612.1| FAD synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 309

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ +A +IAN  N P+ V++F+ HP+ I         L     +
Sbjct: 20  VLALGFFDGVHLGHQRLITRAREIANQKNLPVIVMTFDRHPKEIYADKKNFKYLETLDEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + K+G   L    FT + +  SA++F+  V+V+ L   TV+ G  + +G     +  
Sbjct: 80  ADKMAKLGVDYLAVMPFTKDFSQISAQKFVDNVIVK-LNADTVVAGFDYTYGPKNIANMD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +      V   ++ + K   + S+ IR A+  G +  A  L+G+ + +   V H
Sbjct: 139 NLPNFAKGRFNIVVMPKQVFDGKK--IGSTEIRQAIKDGKMELAYELMGHHYVMSGIVGH 196

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN++ +   ++ K GVYA + +   +   S + + G N T+  N  + 
Sbjct: 197 GKRNGHKLGFPTANLEWANHKVIPKIGVYATKTKVNGKWHES-MTSVGYNVTIGQNKRIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +ES IFDF ++IYG+   + ++ Y R EIKF  +++L+  + +D+ + +
Sbjct: 256 IESNIFDFDEDIYGKPIEIKWYKYTRGEIKFAGLDELREQLEKDQDEIK 304


>gi|282854620|ref|ZP_06263955.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J139]
 gi|282582202|gb|EFB87584.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J139]
          Length = 298

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 150/297 (50%), Gaps = 18/297 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++        L   S++ +I
Sbjct: 10  VVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALLC--SLERRI 67

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L+  G S +    FT E A+++   F+ +VL   L+ + V+ G  FRFG+   G    
Sbjct: 68  EWLKDAGASEVRVVNFTTEIASWAPAAFVDRVLGP-LQPRHVLVGQNFRFGRHAVGTPDA 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L +    +G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G
Sbjct: 127 LAE----HGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVVMG 182

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS----GVANFGRNPTMVPNG 254
           ++ GR LGFPTAN+ +  D  +  +GVYA                   + G NPT   +G
Sbjct: 183 DQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTF--DG 240

Query: 255 -PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               +E+++ D    E+YG    V+F + LR +IKF  IE L   M +D + A+++L
Sbjct: 241 VERRVETYVIDRDDLELYGVDIAVTFAERLRGQIKFDGIEPLISQMADDVETAKRVL 297


>gi|291546825|emb|CBL19933.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus sp. SR1/5]
          Length = 299

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 14/306 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           ++I+   P  L    V +G FDGIH GH  ++E+ ++       TVL       ++   S
Sbjct: 4   LKIDGEFPR-LSKSAVTLGKFDGIHRGHQKLVEKILEQKEKGLQTVLF------SLGIGS 56

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             IFT        ++LEK G   LI         +  AE F++++LV  L+ + V  G  
Sbjct: 57  QMIFTKEERC---QLLEKAGVDVLIECPLDNRIRHMKAETFVKEILVGDLQAEHVAVGED 113

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG +R G   +L+  G K GF    + +    + +I SS+ IR  L KG++     LL
Sbjct: 114 FRFGYERKGTPQLLETMGRKLGFTVDVVPKEMEGRRKI-SSTFIREELKKGNMEKVNDLL 172

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFG 245
           G  F ++  + HG  +G  +  PT N+  + + L+   GVY      +D+T   G+ N G
Sbjct: 173 GIPFFVDGVIEHGRGMGHKVLLPTTNIVPAKEKLMPPNGVYDTVSHFKDRT-LCGITNVG 231

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT +    L +E+++FD  +++YG+ C V FF Y RPE +F  IE LK  + +D +K 
Sbjct: 232 YKPT-IGEKFLGVETYLFDCEEDLYGEPCRVEFFHYSRPEKRFSSIEALKQQLLKDAEKG 290

Query: 306 RKILES 311
           +    S
Sbjct: 291 KAYFRS 296


>gi|315604468|ref|ZP_07879534.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315314174|gb|EFU62225.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 329

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 18/320 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+H++     +P + +  VV IGNFDG+H GH  ++   ++ A    +    ++F+PH
Sbjct: 1   MKVWHSL---AEIPGN-ESAVVTIGNFDGMHNGHKKVIATCVERARKLGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +    +  +SP   +   +   G  A +   +     +  A++F+ + LV     
Sbjct: 57  PIQVHRPEVGLQLISPLRDRLDAMAAAGLDATLVAHYDASVYSLDADEFVDEYLVGRCGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG+  AG    L+  G  YGF  + + ++   + +  SSS +R  L  G 
Sbjct: 117 REVVVGEDFRFGRANAGTIDTLRALGRSYGFDVITVTDIEAPEGRRWSSSWVRELLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD---ILLKEGVYA---IRF-- 230
           V  AA +LG+   I   V HG K GR LGFPTAN  LS D   ++  +GVYA   +R   
Sbjct: 177 VSGAARVLGHLHRIRGSVCHGFKRGRALGFPTAN--LSEDVEGVIPADGVYAGWVVRAVP 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
            TQ         + G NP         +E+ +   S   +YG+R  V+F   +RP   F 
Sbjct: 235 GTQSAEFLPAAISVGTNPQF-SGETRTVEAHVLGRSDLNLYGERIAVTFVSRIRPMQSFA 293

Query: 290 DIEKLKIYMGEDEKKARKIL 309
            ++ L   M +D ++   IL
Sbjct: 294 SLDDLLTQMDDDLRQTASIL 313


>gi|68536213|ref|YP_250918.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium jeikeium K411]
 gi|68263812|emb|CAI37300.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           jeikeium K411]
          Length = 326

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 153/317 (48%), Gaps = 21/317 (6%)

Query: 13  LPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           +P HL  G  VV IG FDG+H GH  +L++A+++A     P  + +F+PHP  + +  + 
Sbjct: 10  IPEHLAAGGTVVTIGVFDGVHRGHQQLLQRAVELARERGVPSVMFTFDPHPTVVFKPDAV 69

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              LS    + ++  + G   ++   FT + A++S E+++ +VLV+ L  K V+ G  F 
Sbjct: 70  PPLLSSVRRRAELAHEYGIDHVVVVSFTKQIASWSPEEYVDQVLVKMLNAKAVVVGDNFT 129

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AG    L++ G   G   V + EL  +   +V S+ IR AL +G+V  A   LG 
Sbjct: 130 FGHKAAGTPETLRELGAARGMR-VDVLELLEDGDHVVCSTWIRQALAEGNVDGANEALGR 188

Query: 189 RFTIESDVIH-GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG- 245
            F +  +V H   + GR LGFPTAN+  +    L  +GVYA           S  A  G 
Sbjct: 189 HFRVAGEVTHGAGRGGRALGFPTANLYFAEKFALPADGVYAGYVTILPGHGISTGATIGT 248

Query: 246 -----RNPTMVPNG--------PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                R P  +  G        P  +ESFI D   ++YG    V F  +LR    +  ++
Sbjct: 249 MPVGERLPAAISVGTNPTFGHEPRSVESFILDHDADLYGLDIAVEFVHHLRGMETYNSLD 308

Query: 293 KLKIYMGEDEKKARKIL 309
           +L   +G D    RK L
Sbjct: 309 ELIEAIGRDVTDTRKAL 325


>gi|187251087|ref|YP_001875569.1| riboflavin biosynthesis protein RibF [Elusimicrobium minutum
           Pei191]
 gi|186971247|gb|ACC98232.1| Riboflavin biosynthesis protein RibF [Elusimicrobium minutum
           Pei191]
          Length = 302

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 11/293 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FDG+H GH  ++    K+A  NN    ++ F   P+T++ +S  +  L+ P  + 
Sbjct: 8   ITIGTFDGVHKGHQTLISGLNKLAKKNNMAPLLVCFPLPPKTLLSNSPELTVLTLPDEKY 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L+  G   +    F     + S E F   +L++   +  ++ G  F FGK+R G    
Sbjct: 68  ALLKHYGAKNIEILNFK-SCRHISRENFFD-ILLKRYNMGGLLVGRDFAFGKERKGHIDF 125

Query: 140 LQKRGEKYGFHTVFIDELRNNKS--QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+    K G   V  D   N  S    +SSS IR  L  GH+  A   LG ++T E  V+
Sbjct: 126 LRAACAKQGVKLVVADFYGNKDSGGHKISSSLIRKTLLDGHIRLAGKFLGRKYTAEGIVV 185

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP---NG 254
            G+K+GR LGFPTAN+ ++   +L +GV+++      +  + GVAN G  PT+ P     
Sbjct: 186 TGKKLGRKLGFPTANLGINHYKVLPQGVFSVE-AVLGKEKFKGVANIGFRPTVNPIHAKV 244

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P L+E  I +F+++IYG+  +V+F D +R E KF  +  L   M  D+  A K
Sbjct: 245 P-LVEVHILNFNRDIYGKNLSVNFVDKIRGEKKFDGLPALIKQMTVDKALAEK 296


>gi|320094035|ref|ZP_08025859.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319979040|gb|EFW10559.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 329

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M ++H++     +P   +  VV IGNFDG+H GH  ++   ++ A    +    ++F+PH
Sbjct: 1   MRIWHSL---AEIPGAQRS-VVTIGNFDGMHNGHKKVVSTCVERARRRGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  + +  +SP   +   +   G  A++   + +   +   ++FIQ+ +V+ +  
Sbjct: 57  PLQVHKPEAGVQLISPLRDRLDAMAAAGLDAVLVAHYDVNLYSMEPDEFIQEYVVDRMGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG+  AG    L+  G   GF  V + ++   + +  SSS +R+ L +G 
Sbjct: 117 VEVVVGEDFRFGRANAGTIDTLRDLGRGLGFDVVMVTDIEAPEGRRWSSSWVRSLLAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA +LG+   I   V HG K GR LGFPTAN+    + ++  +GVYA         +
Sbjct: 177 VAGAARVLGHLHRIRGTVEHGFKRGRALGFPTANLASGIEGVVPGDGVYAGWLVRNVPGT 236

Query: 238 YS-----GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDI 291
            S        + G NP         +E+ +   S   +YG+R  V+F   +RP + F  +
Sbjct: 237 LSAEFLPAAISVGTNPQFGAT-ERTVEAHVLGRSDLNLYGERIAVTFVSRIRPMLAFSSL 295

Query: 292 EKLKIYMGEDEKKARKIL 309
           E+L   M +D ++   +L
Sbjct: 296 EELLAQMDDDLRQTASVL 313


>gi|222529047|ref|YP_002572929.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455894|gb|ACM60156.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 305

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 11/302 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +   +  P       VA+G FDG H+GH  + E     AN     V +F  HP 
Sbjct: 1   MNVYEMVAKREDTP------AVALGFFDGFHIGHKKLFEVLNANANGKKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +     +   ++       G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTKYILTNEERLE--FFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSRYLCEKLYQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY       D+  Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVYVTNTIIDDK-RYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIT 290

Query: 300 ED 301
           +D
Sbjct: 291 QD 292


>gi|313836840|gb|EFS74554.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA2]
 gi|314929748|gb|EFS93579.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL044PA1]
 gi|314972181|gb|EFT16278.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA3]
 gi|328907606|gb|EGG27370.1| riboflavin biosynthesis protein RibF [Propionibacterium sp. P08]
          Length = 300

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 152/299 (50%), Gaps = 20/299 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IGNFDG+H GH  ++++A ++  +  + V++F PHP +++        L P   + + 
Sbjct: 10  VVIGNFDGVHRGHQALVQEAKRVDPDGCVVVVTFWPHPLSVLAPDRAPALLCPLERRIEW 69

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L+  G S +    FT E A+++   F+++VL   L+ + V+ G  FRFG+   G    L 
Sbjct: 70  LKDAGASEVRVVNFTPEIASWTPAVFVERVLGP-LQPRHVLVGQNFRFGRHAIGTPDALT 128

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           + G  +G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G++
Sbjct: 129 EMG--HGRFQVHAMDLVAISGVTVSSTRVREMVAAGKVAEAALLLGRPFEVGGVVVMGDQ 186

Query: 202 IGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRN-PTMVPNG--PLL 257
            GR LGFPTAN+    D  +  +GVYA           SG  + GR  P+ +  G  P  
Sbjct: 187 RGRELGFPTANLVAPRDRAVPSDGVYA------GWLEPSGGLDAGRRLPSAISVGTNPTF 240

Query: 258 ------LESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 +E+++      E+YG   TV+F ++LR +IKF  IE L   M +D + A++ L
Sbjct: 241 EGVEQRVETYVIGRDDLELYGVDVTVTFAEWLRGQIKFDGIEPLISQMSDDVEAAKRAL 299


>gi|325696839|gb|EGD38727.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK160]
          Length = 310

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 144/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  ++ G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETISAGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|332359774|gb|EGJ37589.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK49]
          Length = 310

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 144/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA+     I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIADKQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  I  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELILHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTHE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|68304940|gb|AAY89951.1| predicted riboflavin biosynthesis protein [uncultured bacterium
           BAC13K9BAC]
          Length = 305

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 10/291 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IGNFDGIH GH  +++  Q I  A N    + +FN  P  + + S+    +   
Sbjct: 13  KPKVVTIGNFDGIHKGHQSLIKKTQEISHAENLESIIFTFNMLPEEVFEQSN-FQRIYNN 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++   ++    + ++   F  +  + SA  F +++L++ L  K ++ G  F+FGK R G
Sbjct: 72  ELKFDYIKAHEINTILSINFN-DIKDLSASFFCEEILIKKLITKYLVIGKNFKFGKGREG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L++      FH + I EL    ++ +SS+ +R  L  G   +  + LG  + +   
Sbjct: 131 NIDKLKEYHNSGDFHLI-IPELEQYDNEHISSTRVRKLLKDGKFSDVKNCLGREYMLRGT 189

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V  GE++GR LG+PTAN+ L  D  L +GVY  +    D   Y G+A+ G  PT   NG 
Sbjct: 190 VTTGEQLGRKLGYPTANISLDYDYPL-DGVYLSKVYV-DGVFYHGLASVGNKPTY--NGK 245

Query: 256 -LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             +LE FI +F+Q+IY +   V F + +R +IKF   ++L   M ED K A
Sbjct: 246 EKILEVFILNFNQDIYNKEVEVYFLEMIRNQIKFDSQDELIKQMNEDHKYA 296


>gi|260578911|ref|ZP_05846815.1| riboflavin biosynthesis protein RibF [Corynebacterium jeikeium ATCC
           43734]
 gi|258602963|gb|EEW16236.1| riboflavin biosynthesis protein RibF [Corynebacterium jeikeium ATCC
           43734]
          Length = 380

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 153/317 (48%), Gaps = 21/317 (6%)

Query: 13  LPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           +P HL  G  VV IG FDG+H GH  +L++A+++A     P  + +F+PHP  + +  + 
Sbjct: 64  IPEHLAAGGTVVTIGVFDGVHRGHQQLLQRAVELARERGVPSVMFTFDPHPTVVFKPDAV 123

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              LS    + ++  + G   ++   FT + A++S E+++ +VLV+ L  K V+ G  F 
Sbjct: 124 PPLLSSVRRRAELAHEYGIDHVVVVSFTKQIASWSPEEYVDQVLVKMLNAKAVVVGDNFT 183

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AG    L++ G   G   V + EL  +   +V S+ IR AL +G+V  A   LG 
Sbjct: 184 FGHKAAGTPETLRELGAARGMR-VDVLELLEDGDHVVCSTWIRQALAEGNVDGANEALGR 242

Query: 189 RFTIESDVIH-GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFG- 245
            F +  +V H   + GR LGFPTAN+  +    L  +GVYA           S  A  G 
Sbjct: 243 HFRVAGEVTHGAGRGGRALGFPTANLYFAEKFALPADGVYAGYVTILPGHGISTGATIGT 302

Query: 246 -----RNPTMVPNG--------PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                R P  +  G        P  +ESFI D   ++YG    V F  +LR    +  ++
Sbjct: 303 MPVGERLPAAISVGTNPTFGHEPRSVESFILDHDADLYGLDIAVEFVHHLRGMETYNSLD 362

Query: 293 KLKIYMGEDEKKARKIL 309
           +L   +G D    RK L
Sbjct: 363 ELIEAIGRDVTDTRKAL 379


>gi|188996310|ref|YP_001930561.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931377|gb|ACD66007.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 309

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 142/294 (48%), Gaps = 6/294 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             IGNFDG+H GH  IL++   IA+  N    V++F PHPR I+       ++     + 
Sbjct: 16  CTIGNFDGVHKGHKEILDKLKNIASERNLKTVVITFYPHPRKILNPQQYKCSIVNLETKV 75

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L++     ++   F         E F+   L E +  K ++ G  +RFG  R+GD  +
Sbjct: 76  QLLKEAKIDYILVIDFDKNFYEKQPEDFLN-FLKEKINCKYLVVGKDWRFGHKRSGDINL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            +   EK  +  V I+++     +I SSS+IR  L  G +  A  LLG  + +   V+ G
Sbjct: 135 AKSLEEKLDYKVVIIEDITEENKRI-SSSDIRDFLKNGSLEKAVQLLGRDYYLIDKVVEG 193

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +K GR LGFPT N++   D+ LK+GVYA  F   +      V N+G  PT+      +  
Sbjct: 194 DKKGRELGFPTINLKPDDDLCLKKGVYA-GFICYENVCQKAVINYGNRPTVDGTKTFMEA 252

Query: 260 SFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             I D            + F  YLR E KF  +++LK  +  D +KA ++L  S
Sbjct: 253 HIIEDLKIHPKTNDYVKLVFKTYLREERKFNSVDELKNQIKLDIQKALEVLNES 306


>gi|290770196|gb|ADD61954.1| putative protein [uncultured organism]
          Length = 309

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 6/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V A+G FDG+H GH LI+  A++ A +      V  F     T       I  L     +
Sbjct: 16  VCALGLFDGVHRGHQLIITTAVQKAQSLGGQSAVFCFKTDTVTSKGHDGRIEMLMSDDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + ++G   L    F L       E F++KVL E L     + G  F FG+   G   
Sbjct: 76  HEKMAELGVEVLFSPDFAL-FKGMEPEGFVKKVLKEKLNCCGAVCGNDFTFGRGAQGKAA 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K GEKY      +  L    ++++SS+ IR  + +G +  A  +LGY F    +V H
Sbjct: 135 DLKKLGEKYDMDVEIVSPLLMG-NEVISSTEIRRCVREGEIAKANEMLGYHFGFCIEVEH 193

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GRT  FPT N Q+    ++ K GVY       D   Y+GV N G  PT+      L
Sbjct: 194 GFQRGRTWDFPTINQQIPKGRVMPKFGVYCSTVEI-DGKKYAGVTNIGVKPTVHVETAPL 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            E+FI D+  ++YG++  +   ++LRPE  F   + L+  +  ++++A +  E +
Sbjct: 253 AETFIVDYHGDLYGRKLKLELHEFLRPEKMFDSFDSLREEIARNKEQAVRYFEEN 307


>gi|297202741|ref|ZP_06920138.1| riboflavin biosynthesis protein RibF [Streptomyces sviceus ATCC
           29083]
 gi|297148188|gb|EFH28875.1| riboflavin biosynthesis protein RibF [Streptomyces sviceus ATCC
           29083]
          Length = 275

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 7/244 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPEDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPSVVVTFDPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++ ++G  AL+   FT E +  S  +F+ KVLV+ L  K V+ G  FR
Sbjct: 68  PPLLAPHHRRAELMAELGVDALLILPFTTEFSKLSPAEFVVKVLVDKLHAKAVVEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L ++G+ Y F    +D      +   +  SS+  R  + +G V  A  +
Sbjct: 128 FGHKAAGNVDFLVEQGKTYDFEVEVVDLYVTGSAGGGEPFSSTLTRRLVAEGDVEGAGEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA    TQ +   + + + 
Sbjct: 188 LGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHTQGEAMPAAI-SV 246

Query: 245 GRNP 248
           G NP
Sbjct: 247 GTNP 250


>gi|219850608|ref|YP_002465041.1| riboflavin biosynthesis protein RibF [Chloroflexus aggregans DSM
           9485]
 gi|219544867|gb|ACL26605.1| riboflavin biosynthesis protein RibF [Chloroflexus aggregans DSM
           9485]
          Length = 311

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 12/298 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  ++   ++ A    +   VL++ P+PR ++Q   P+  L+  
Sbjct: 14  RATVLTIGRFDGVHLGHQQLIRTTVERARALDMLSAVLTWEPNPRAVLQPGQPLQLLT-- 71

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            + EKI  + ++    LI   FT E    SA +++ ++    + V+ +  G  F  G+ R
Sbjct: 72  DLDEKIEQIRRLEPDLLIIAPFTNEIRQLSAAEYMARICAA-VPVREIWVGEDFAMGRGR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD   L + G + GF    + +        VSSS IR  +  G+V  A  LLG  F + 
Sbjct: 131 EGDIPRLMEIGRELGFAVGALSKYMMAGIP-VSSSRIRELVLAGNVAGAGALLGRPFALR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V  G+  GR +GFPTAN+Q++PD+++   GVYA R           V N G  PT   
Sbjct: 190 GLVTRGDGRGRQIGFPTANLQVNPDVVVPAHGVYACRTYLATGEVVPTVTNIGVRPTF-- 247

Query: 253 NGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +G   ++E+ + D+  ++Y Q   +     LR E KF  I++L   +  D  +AR +L
Sbjct: 248 DGTRQVVEAHLIDWQGDLYDQHLRIELLMRLRNERKFSGIDELVAQIRHDVAEARVVL 305


>gi|260494126|ref|ZP_05814257.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_33]
 gi|260198272|gb|EEW95788.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_33]
          Length = 319

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + ++ A  N     V +F  HP  I+        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETVRAARENGKQAVVFTFANHPMEILFPEKKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   ++  K       Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVVMQKVDKNFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A  LL +   I  +VI
Sbjct: 138 LEYLAE---IHNIKVTELPPVTLDGELVSSSAIRKKIANSDFDGAVKLLDHPMIIIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPSGIYGAFLQVGDKNSKVLYGVVNVGCNPTL--KHE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF++E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 MSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|320546829|ref|ZP_08041135.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equinus ATCC 9812]
 gi|320448525|gb|EFW89262.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equinus ATCC 9812]
          Length = 310

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 157/300 (52%), Gaps = 13/300 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLS 73
           +  V+ +G FDG+H GH  + +QA KIA      +TVL+FN  PR  +   +P  +  L+
Sbjct: 16  RDSVLVLGYFDGLHRGHKALFDQARKIAERDQLELTVLTFNESPRLALARFTPELLLNLT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +     + G   L    FT   +  S+++F++   ++ L  KT++ G  ++FG DR
Sbjct: 76  APQKRYGKFAEYGVDNLYLIDFTSSFSKGSSKEFLE-TYIKALRAKTIVVGFDYKFGHDR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L    E +    + + E++ N  +I SS+ IR  +  G+V   + LLGY F+ +
Sbjct: 135 K-DANYLS---EIFDGQVIVVPEVQENGEKI-SSTRIRKEILSGNVSEVSRLLGYEFSTK 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GR++GFPTAN+ +   +    +GVY        +  Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRSIGFPTANLAVLDRVYTPGDGVYVTDIIVSGK-RYRSMTSVGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              L LE+ IFDF ++IYG+   + + D +R   KF   ++L   + +D+K A+  +++S
Sbjct: 248 GQDLRLEANIFDFQEDIYGETVEIIWLDKIRGMEKFSGADELVEQLKKDKKIAQNWIKNS 307


>gi|319761890|ref|YP_004125827.1| riboflavin biosynthesis protein ribf [Alicycliphilus denitrificans
           BC]
 gi|330826258|ref|YP_004389561.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           K601]
 gi|317116451|gb|ADU98939.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           BC]
 gi|329311630|gb|AEB86045.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           K601]
          Length = 348

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 41/337 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
            + IGNFDG+H GH  +L      A +  +   VL+F PHPR           L+P  I 
Sbjct: 17  ALTIGNFDGVHRGHQAMLALLNNEAEHRGVQSCVLTFEPHPRDYFAGLHRRPELAPARIG 76

Query: 78  --QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             ++K+  L + G    +   F    A  S + FI+ V+V  L  + ++ G  FRFG  R
Sbjct: 77  TLRDKLSELARCGVQQTVVLPFNERLACQSPQAFIEDVVVRGLGARYLLVGDDFRFGSQR 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVLNAAHLLGYR 189
           AGD  +L   G  +GF        R N  ++    VSS+ +R AL  G +  AA LLG  
Sbjct: 137 AGDYAMLDAAGPAHGFEVA-----RMNSYEVHGLRVSSTAVREALAAGDMQEAARLLGRP 191

Query: 190 FTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + I   V+HG K+GR L           GF T N++ +       G++A+          
Sbjct: 192 YAISGHVVHGRKLGRQLGRSAASGAHQDGFRTLNLRFAHWKPAASGIFAVLVHGLHDQPL 251

Query: 239 SGVANFGRNPTMVP----NGPLLLESFIFDF-----SQEIYGQRCTVSFFDYLRPEIKFK 289
            GVAN G  P++ P     G +LLE+   D+     ++  YG+   V     L  E+K+ 
Sbjct: 252 PGVANLGVRPSLDPRDVNGGRVLLETHCLDWPAHLGAEGAYGKIIRVELLHKLHDELKYD 311

Query: 290 DIEKLKIYMGEDEKKARKILESSYPL-----SERDRI 321
            +  L   + +D + AR    S+        + RDRI
Sbjct: 312 SLAALTAGIAKDCEDARAYFASTQHAETRRQTTRDRI 348


>gi|225630376|ref|YP_002727167.1| riboflavin biosynthesis protein RibF [Wolbachia sp. wRi]
 gi|225592357|gb|ACN95376.1| riboflavin biosynthesis protein RibF [Wolbachia sp. wRi]
          Length = 310

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 14/300 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+A     P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERELPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +  +I SSS+IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTID-GKICSSSSIREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIR--FRTQD 234
           +  A  LLG  + +   V  G   GR +GFPT N+ +  D ++K   G Y  R  F   +
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIE-DCMIKPKFGTYYARVTFPDSN 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GV N G  PT       ++E  IFDF +++Y  +  +    ++R E KF  IE+L
Sbjct: 233 PNWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKFHSIEEL 292


>gi|311030083|ref|ZP_07708173.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. m3-13]
          Length = 323

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 162/319 (50%), Gaps = 24/319 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           H++   + +P       VA+G FDGIHLGH  +++ A+  + +  +   V++ +PHP  +
Sbjct: 10  HSLSKEECIP-----ATVALGFFDGIHLGHQKVIKSALSKSKDLGVASAVMTLDPHPSVV 64

Query: 63  IQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++ +   +  ++P S + ++L  +G   L   KF +  A+   + F+ + ++  L +K V
Sbjct: 65  LRKTVQHVRYITPLSEKIRLLASLGVDILYVVKFDMSFASLVPQDFVDQYII-GLNIKHV 123

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  + +G    G    L     +  F    +++   N  + VSS+ IR  L +G V +
Sbjct: 124 VAGFDYSYGSLGKGTMETLPFHSRQQ-FDQTVVEKYTTNDLK-VSSTFIREQLKEGKVSD 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSG 240
             + LG  + I   V HGEK GRT+GFPTAN+ L+ D ++ K GVY +R    D+  ++G
Sbjct: 182 LPNTLGRFYQIRGKVGHGEKRGRTIGFPTANVVLADDYVIPKTGVYTVRMNVNDRW-FNG 240

Query: 241 VANFGRNPTM-------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           V N G  PT        +P+    +E  + DF Q+IYG    + + D +R E KF  I+ 
Sbjct: 241 VCNVGYKPTFHKQEKESLPS----IEVHLLDFDQQIYGAEVIIEWHDCIREEKKFSGIDA 296

Query: 294 LKIYMGEDEKKARKILESS 312
           L   + +D+  A    + +
Sbjct: 297 LVAQIRKDKGIAEDYFQKN 315


>gi|325299239|ref|YP_004259156.1| riboflavin biosynthesis protein RibF [Bacteroides salanitronis DSM
           18170]
 gi|324318792|gb|ADY36683.1| riboflavin biosynthesis protein RibF [Bacteroides salanitronis DSM
           18170]
          Length = 306

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSS-SPIFTLSPPSI 77
              IG FDG+H GH  +++Q  +  +A      +++F  HPR ++QS   P +    P  
Sbjct: 16  AATIGCFDGVHRGHRYLIDQVRREALARGLHSALVTFPVHPRQVMQSGYCPQWLTCLPQK 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E +L++      I   FT E +  SA +F++ +L     V+ ++ G   RFG +R+   
Sbjct: 76  KE-LLQQEDADYCILLPFTHELSLLSARRFME-LLHTRFNVQALVIGYDHRFGHNRSEGF 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
                 G++ G   +    L  +   I SSS IR  L +G V  A   LGYR+ ++  V+
Sbjct: 134 EDYCCYGKELGMEVIHAQALEEDGLSI-SSSLIRNLLKEGDVARANRYLGYRYYLDGQVV 192

Query: 198 HGEKIGRTLGFPTANMQLS-PDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            G ++GR LGFPTAN+Q S PD L+ KEGVYA+ +   +   Y+G+ N G  PT+     
Sbjct: 193 SGYQVGRKLGFPTANLQPSCPDKLVPKEGVYAV-YAYVEGKRYAGMLNIGSRPTIGNGTE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +E  +  F   +Y     V F  Y+R E KF+ IE L   + +D+    ++L
Sbjct: 252 RSIEVHLIGFEGNLYQHALRVEFMQYIREEQKFEGIEALIAQLQQDKATIIRLL 305


>gi|42520600|ref|NP_966515.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|99035945|ref|ZP_01314991.1| hypothetical protein Wendoof_01000176 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|42410339|gb|AAS14449.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 310

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 14/300 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+A     P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +  +I SSS+IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTID-GKICSSSSIREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIR--FRTQD 234
           +  A  LLG  + +   V  G   GR +GFPT N+ +  D ++K   G Y  R  F   +
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIE-DCMIKPKFGTYYARVTFPDSN 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GV N G  PT       ++E  IFDF +++Y  +  +    ++R E KF  IE+L
Sbjct: 233 PNWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKFHSIEEL 292


>gi|148652439|ref|YP_001279532.1| riboflavin biosynthesis protein RibF [Psychrobacter sp. PRwf-1]
 gi|148571523|gb|ABQ93582.1| FMN adenylyltransferase / riboflavin kinase [Psychrobacter sp.
           PRwf-1]
          Length = 355

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 149/324 (45%), Gaps = 48/324 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQS------SSPIFTL 72
           V+ IGNFDG+HLGH  +L+Q    A    ++  V+ F P PR           S+P   L
Sbjct: 25  VLTIGNFDGVHLGHQAMLKQLQDTAKQQQLSSMVMIFEPQPREYFAQLKGDPESAPA-RL 83

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  +L+  G   ++  KF     + SA +F   +L ++L V+ ++ G  FRFG D
Sbjct: 84  TSQDEKLTLLKDFGIDTVVVAKFDEAFRSLSATEF-ADMLTQYLNVQALVLGDDFRFGHD 142

Query: 133 RAGDRGILQKRG-EKYGFHTV---------FIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
           R GD   L+  G      HT+           D+L +N+   +SS+ IR  L  G +  A
Sbjct: 143 RTGDSAFLRSYGLPVTNLHTITDTQAIASGVADDLSDNR---ISSTRIRELLLAGDLRMA 199

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT------ 236
            HLL   ++I  +V+ G+KIGRTL FPTAN++L+       GVY +     D+       
Sbjct: 200 NHLLNRDYSITGEVVGGDKIGRTLDFPTANIELNRVRPALHGVYGVDVVVLDEQGAVIKN 259

Query: 237 -------------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
                              S  G AN G  PT+       LE F   FS ++YG+   V 
Sbjct: 260 AFAHLAQPEQLGISGLRPHSLFGTANIGIRPTVDKPHEWRLEVFFPKFSGDLYGKTLQVR 319

Query: 278 FFDYLRPEIKFKDIEKLKIYMGED 301
           F  +L  E K+  +E LK  + +D
Sbjct: 320 FLHHLHDERKYDGLEALKAGIQQD 343


>gi|88801254|ref|ZP_01116790.1| hypothetical protein MED297_18248 [Reinekea sp. MED297]
 gi|88776005|gb|EAR07244.1| hypothetical protein MED297_18248 [Reinekea sp. MED297]
          Length = 282

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 9/258 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           LK   V IG+FDG+H+GH  I+++  + A  N+    V++F P PR  +   +    LS 
Sbjct: 11  LKPAAVTIGSFDGVHVGHQQIIQRLTRYAQANDLSSVVVTFEPQPREFLSPENAPARLSS 70

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            + +   L ++G   L+   F     + SA+ F++ VL++ L  + +  G  FRFG DR 
Sbjct: 71  LTDKALRLAELGVDHLVVLPFNRRLRSLSADDFVRSVLIDRLNTQWLQVGDDFRFGADRK 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   L+     Y F    +   R +  + VSS+ IR A+ +     AA LLG  F +  
Sbjct: 131 GNVDFLRN----YAFDVTDLPSQRVDGER-VSSTLIRQAIAENDFNRAATLLGESFALSG 185

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V++G ++GRT+G PTAN+ L    L  +GV+A+      +T + GVAN G  PT V + 
Sbjct: 186 RVVYGRQLGRTIGVPTANILLPHHRLPTDGVFAVSSAIDGKTIH-GVANLGPKPT-VGDH 243

Query: 255 PLLLESFIFDFSQEIYGQ 272
            L LE+  FD+   +YG+
Sbjct: 244 RLWLETHFFDYDGHLYGR 261


>gi|86157049|ref|YP_463834.1| FMN adenylyltransferase / riboflavin kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773560|gb|ABC80397.1| FMN adenylyltransferase / riboflavin kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 323

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           + VF ++E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PH
Sbjct: 5   VQVFRSLE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRNAGVLTFEPH 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV
Sbjct: 64  PVRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFTARDLAGRLEV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+
Sbjct: 124 ADVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGN 181

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR------- 231
           V  AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R         
Sbjct: 182 VEAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATT-GLLPANGVYVVRAELGGAHRE 240

Query: 232 --TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKF 288
                 + + GV N G  PT+      + E+ +FDF  +++YG    ++F   LR E +F
Sbjct: 241 TGLSGASVHGGVCNVGVKPTVESGASPVAEAHLFDFDGRDLYGTPMRLAFLARLRDEQRF 300

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E L+  +  D + A ++L
Sbjct: 301 PSVEALRAQIARDVEAAHRVL 321


>gi|2289231|gb|AAB64408.1| macrolide-efflux protein [Streptococcus agalactiae]
          Length = 311

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 15/291 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A KIA   N  I VL+FN  PR       P  +  L+ P 
Sbjct: 20  VLVLGYFDGLHLGHKALFDKAKKIATEKNLKIVVLTFNETPRLTFARFQPELLLHLTSPE 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR-AG 135
            + +  ++ G   L    FT   +  S++ FI+K  +  L  K  + G  ++FG +R +G
Sbjct: 80  KRSEKFQEYGVDELYLMNFTSHFSKVSSDLFIKK-YIYGLRAKAAVVGFDYKFGHNRTSG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D      +G  Y      IDE+     +I SS+ IR  +T+G+V  A  LLGY F+    
Sbjct: 139 DYLARNFKGPVY-----IIDEISEGGEKI-SSTRIRQLITEGNVEKANQLLGYEFSTCGM 192

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+GFPTAN+  ++   L  +GVY I     +   Y  + + G+N T     
Sbjct: 193 VVHGDARGRTIGFPTANLAPINRTYLPADGVY-ISNVLINGKYYRAMTSIGKNITF-GGT 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L LE+ IFDF  +IYG+   + +   +R  +KF  I+ L   + +D++ A
Sbjct: 251 ELRLEANIFDFDGDIYGETIEIFWLKRIREMVKFNGIDDLVKQLKKDKEIA 301


>gi|326803568|ref|YP_004321386.1| riboflavin biosynthesis protein RibF [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650640|gb|AEA00823.1| riboflavin biosynthesis protein RibF [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 318

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 152/299 (50%), Gaps = 10/299 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSS 66
           I+Q+L N+ +G V+A+G FDG+H GH  +++ A K A     P+ V++FN  P  + Q  
Sbjct: 10  IDQNLKNN-EGIVLALGFFDGVHRGHQAVIKAARKEAFKRKLPLAVMTFNISPLIVNQDL 68

Query: 67  SPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P         QEK  +LE  G   +    +T   +N S + F+   LV  L  K V+ G
Sbjct: 69  HPNQMKYLTQNQEKMLLLETFGVDRVYLVDYTSAFSNQSPKAFVDNYLV-GLNAKVVVAG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + +G     +   L    E   F  + +  L  N ++I +S  IR  LT+G +  A  
Sbjct: 128 FDYTYGAKAIANMKNLPDYAED-RFKIIEVPVLNENNNKI-ASKQIRKELTEGSLEEANQ 185

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
            LGY +     VI+G K GRTLGFPTAN+      L+ K GVY ++ +   Q  + G+A+
Sbjct: 186 ALGYPYFFRGLVINGFKRGRTLGFPTANIYTQASTLIPKVGVYLVQCQINHQL-FWGMAS 244

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G N T   +    +E  +FDF  EIYG+   V +++YLR E KF  +E +   + +D+
Sbjct: 245 IGYNVTFGDDNDKTIEINLFDFESEIYGEEMLVFWYEYLRGEKKFSSVEAMVEQLNQDK 303


>gi|15614972|ref|NP_243275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           halodurans C-125]
 gi|10175029|dbj|BAB06128.1| riboflavin kinase / FAD synthase [Bacillus halodurans C-125]
          Length = 313

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 157/294 (53%), Gaps = 14/294 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++E A+KIA        V++F+PHP+ +++  S P++ ++P  +
Sbjct: 21  VMALGYFDGVHLGHRTVIETAVKIAKEKGAMSAVMTFHPHPKEVLRKPSEPMYYITP--L 78

Query: 78  QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           ++KI  +E +G   L    F    A+ + +QF+ + L+  L    V+ G  F +G+   G
Sbjct: 79  EDKITEIETLGVDKLFVVTFNEIFASLTPQQFVDEYLLS-LHTIHVVAGFDFTYGQLGKG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L        F    + ++  + ++I SS++IR  L +G V   +  LG  + ++  
Sbjct: 138 TMETLPFHARNL-FSQTTVAKVEEHGTKI-SSTHIRQLLDEGRVEEISQFLGRDYEVKGK 195

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HGEK GRT+GFPTAN+  ++  ++   GVY +     D  +  GV N G  PT   + 
Sbjct: 196 VVHGEKRGRTIGFPTANVAPIARYMIPATGVYVVE-AVLDGRTLQGVCNVGYKPTFHDST 254

Query: 255 P--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                +E  +FDF+  IY +  TV +   +R E KF  +E LK  + +D + A+
Sbjct: 255 CHGRTIEVHLFDFASHIYERGLTVRWKKRIRSEQKFASLEDLKKQIQQDTETAK 308


>gi|22537157|ref|NP_688008.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae 2603V/R]
 gi|25011086|ref|NP_735481.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae NEM316]
 gi|76787231|ref|YP_329713.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae A909]
 gi|77405709|ref|ZP_00782796.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           H36B]
 gi|77409669|ref|ZP_00786338.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           COH1]
 gi|77411998|ref|ZP_00788327.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           CJB111]
 gi|77414762|ref|ZP_00790888.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae 515]
 gi|22534020|gb|AAM99880.1|AE014237_14 macrolide-efflux protein mreA/riboflavin biosynthesis protein RibF
           [Streptococcus agalactiae 2603V/R]
 gi|23095485|emb|CAD46691.1| macrolide-efflux protein [Streptococcus agalactiae NEM316]
 gi|76562288|gb|ABA44872.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           A909]
 gi|77159192|gb|EAO70377.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae 515]
 gi|77161954|gb|EAO72936.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           CJB111]
 gi|77171719|gb|EAO74919.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           COH1]
 gi|77175705|gb|EAO78487.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           H36B]
 gi|319745004|gb|EFV97332.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae ATCC 13813]
          Length = 310

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 15/291 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A KIA   N  I VL+FN  PR       P  +  L+ P 
Sbjct: 19  VLVLGYFDGLHLGHKALFDKAKKIATEKNLKIVVLTFNETPRLTFARFQPELLLHLTSPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR-AG 135
            + +  ++ G   L    FT   +  S++ FI+K  +  L  K  + G  ++FG +R +G
Sbjct: 79  KRSEKFQEYGVDELYLMNFTSHFSKVSSDLFIKK-YIYGLRAKAAVVGFDYKFGHNRTSG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D      +G  Y      IDE+     +I SS+ IR  +T+G+V  A  LLGY F+    
Sbjct: 138 DYLARNFKGPVY-----IIDEISEGGEKI-SSTRIRQLITEGNVEKANQLLGYEFSTCGM 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+GFPTAN+  ++   L  +GVY I     +   Y  + + G+N T     
Sbjct: 192 VVHGDARGRTIGFPTANLAPINRTYLPADGVY-ISNVLINGKYYRAMTSIGKNITF-GGT 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L LE+ IFDF  +IYG+   + +   +R  +KF  I+ L   + +D++ A
Sbjct: 250 ELRLEANIFDFDGDIYGETIEIFWLKRIREMVKFNGIDDLVKQLKKDKEIA 300


>gi|94969658|ref|YP_591706.1| riboflavin kinase / FMN adenylyltransferase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551708|gb|ABF41632.1| FMN adenylyltransferase [Candidatus Koribacter versatilis Ellin345]
          Length = 315

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 10/309 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M VF +++    +P      VVAIGNFDG+H  H  +L+  +  A++       ++F+PH
Sbjct: 1   MDVFRSLD---EIPAGYGPTVVAIGNFDGVHRAHQRVLKALVNRAHHIGGKAIAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++  S    L+P +++ +++   G  A +   FT + +N S  +F+Q++LVE L  
Sbjct: 58  PTRILRPDSAPKLLTPLALKLRLMAATGVDATLVLPFTRDLSNLSPREFVQRILVEKLAT 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  F FG   +G+   L++ G + GF      E++  +   VSSS +R  +  G 
Sbjct: 118 KEVHEGYNFHFGHKASGNILTLEELGRELGFVVKIYPEMK-LRQHTVSSSEVRKLIAAGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++ S    G   G     PT N+    + +   GVY    R  ++T +
Sbjct: 177 MSRARTLLGRSFSVVSHPGRGRGFGHKYTVPTINLVEYNEQVPGNGVYITTTRVANET-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQ-RCTVSFFDYLRPEIKFKDIEKLKI 296
             V N G  PT   +G   +E+ + +F   E+  Q    ++F   +R EIKF   + LK 
Sbjct: 236 DSVTNVGVRPTFGDDG-FAIETHLLNFHPIELTAQTEVEITFLKRIRDEIKFPHTDALKA 294

Query: 297 YMGEDEKKA 305
            +G D K A
Sbjct: 295 QIGRDVKTA 303


>gi|296327890|ref|ZP_06870426.1| riboflavin biosynthesis protein RibF [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155024|gb|EFG95805.1| riboflavin biosynthesis protein RibF [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 319

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++++AIK A  N     V +F  HP  I+        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLIKEAIKAARENGKQAVVFTFANHPMEILFPEKKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K   +   Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVIMQKVDKDFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A   L +   +  +VI
Sbjct: 138 LEYLAE---VHNIKVTELPPVTLNGELVSSSVIRKKIANSDFEGAIKFLDHPMLVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  ++ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGNKNSQVLYGVVNVGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF++E+YG++  V    ++R E KF  I++LK  +  D
Sbjct: 253 ISLEVHILDFNKEVYGEKVYVQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|327314277|ref|YP_004329714.1| riboflavin biosynthesis protein RibF [Prevotella denticola F0289]
 gi|326944715|gb|AEA20600.1| riboflavin biosynthesis protein RibF [Prevotella denticola F0289]
          Length = 350

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 9/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+H GH  ++ + +  A  S +   V++F+ HPR ++Q+      L+    +
Sbjct: 45  AATIGFFDGVHRGHRFLIGRVVDEARRSGMASAVITFDRHPRQVLQADYQPELLTTLDRK 104

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +      +   F    A   A +F+ +VL   L V+ ++ G   RFG DRA    
Sbjct: 105 LQLLSETQVDNTLVLHFDRSLAALPARRFMDEVLRRQLNVRKLLIGYDNRFGHDRAEGFD 164

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G+  G   V  D       + VSSS IR  + +G + +A  LLGY +TIES ++ 
Sbjct: 165 DYVRYGQALGIGVVRADAFLPGGEK-VSSSVIRDRIRRGDIASANRLLGYAYTIESTIVR 223

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGP 255
           G   G  LGFPTAN+ ++    ++   GVYA+  R +D + +  G+ N G  PT   NG 
Sbjct: 224 GYGNGHRLGFPTANLDMAACRQLIPAAGVYAVAVRQKDSSEWRRGMMNIGTRPTF--NGK 281

Query: 256 LL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            + +E  IF F  ++Y +   VSF   +R E +F  +E L   + +D +
Sbjct: 282 AMSMEVNIFRFDGDLYDKPLAVSFIAKIRDERRFGSLEALAHQLEQDRE 330


>gi|300214377|gb|ADJ78793.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius CECT 5713]
          Length = 318

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 9/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++++AI+   +    + V++F+ HP+ I Q+           + 
Sbjct: 21  VLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRHPKIIFQNIDGEKFKYLTMLD 80

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+   + +G       KF    A  S + FI K +V  L    V+ G  + +GK    +
Sbjct: 81  EKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GLHAICVVAGQDYTYGKHDIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +     K  F  + +D L+ N +Q +SS+ IR  L  G+V  A  LLGY++     V
Sbjct: 140 MDTISDFA-KGRFEIITVDHLQRN-NQKISSTQIRKDLDSGNVEAANLLLGYQYENHGTV 197

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNG 254
            HG K GR +GFPT N+ +   + +L EGVYA++ +  +D + Y G+A+ G N T   + 
Sbjct: 198 EHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKDNSWYEGMASIGHNETFGDDL 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              +E  +F+F + +YG++  V ++ +LR  +KF  +E+L   + +D++
Sbjct: 258 EKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEELIDQLNKDKR 306


>gi|241896000|ref|ZP_04783296.1| FAD synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870731|gb|EER74482.1| FAD synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 311

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 156/293 (53%), Gaps = 9/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+H GH +++++A + A    I   VL+++ HP  + ++ + P+  L+    
Sbjct: 21  VLAMGFFDGVHAGHRMVIKRAAEEAKKRGIKLAVLTYDHHPSIVFKTYNKPLTYLTRLPK 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L ++G        FT E A  + + F+ + +   L  + V+ G    +G   A  +
Sbjct: 81  KLALLAELGVDLTYVVNFTSEFAQLTPQIFVDQYMF-GLHAEAVVAGFDHTYGPKNADMK 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            + Q    +  F  + + ++ N   +  +S+  R  + +G +    HLL   +     ++
Sbjct: 140 HLPQYAQSR--FDVIEVQQV-NVDGKESASTTARKMVDEGRLDTLTHLLMRPYETTGLIV 196

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HGE  GR LG+PTAN++ +P + L   GVY +  +  DQT Y G+A+ G N T   N P 
Sbjct: 197 HGEARGRELGYPTANIETTPGERLPGVGVYVVEMKI-DQTWYPGMASIGYNVTFGENRPK 255

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  +F+FS+ IYG+   + +  YLR E+KF ++++L   + EDEK+A+  L
Sbjct: 256 TVEINLFNFSRAIYGENVQIKWHHYLRGEVKFNNVQELIDQLAEDEKEAQAFL 308


>gi|160915127|ref|ZP_02077340.1| hypothetical protein EUBDOL_01135 [Eubacterium dolichum DSM 3991]
 gi|158432926|gb|EDP11215.1| hypothetical protein EUBDOL_01135 [Eubacterium dolichum DSM 3991]
          Length = 319

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H+GH  ++   +    A N+   +++F P P  +I+    +  L+P   +
Sbjct: 24  VACIGYFDGLHVGHRQLITHVLAHAKAQNAKPALITFEPDPWAVIKQMDDLEHLTPMHKR 83

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I E++G    I   F  +      E F + VL + L++KT++ G  F +G    G+  
Sbjct: 84  IEIAEELGIETWIILTFEKDMQQLRVEDFHELVL-KPLKLKTLVCGYDFHYGYRGEGNSE 142

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K+     + TV +    ++ ++ +SSS I   L +G++  A   L   + +E  V+ 
Sbjct: 143 SLKKQP----YFTVDVVAQVSSDAKKISSSRIEELLRQGNIEQANVFLQRPYELEGIVVK 198

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEG-VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GR  GFPTAN++LS   ++  G VY    + Q +  Y  + N G NPT      + 
Sbjct: 199 GNQFGRRYGFPTANLKLSYRYVIPAGGVYIGEVKVQGRW-YEAIINIGHNPTYNYQKNIS 257

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E+ + DF   IY QR    F  YLR E KF D + L+  + +D++ ARK  + 
Sbjct: 258 IEAHLLDFDTTIYEQRVIFRFLSYLRKEEKFSDAQALQRQLAQDKQVARKYFQE 311


>gi|332670051|ref|YP_004453059.1| riboflavin biosynthesis protein RibF [Cellulomonas fimi ATCC 484]
 gi|332339089|gb|AEE45672.1| riboflavin biosynthesis protein RibF [Cellulomonas fimi ATCC 484]
          Length = 346

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 34/333 (10%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPI 69
            +P+     VV IGNFDG+H GH  +L +    A  +    +  +F PHP  + +     
Sbjct: 13  DVPSGFGPSVVTIGNFDGVHRGHASVLTRMCADARAAGARAVAVTFTPHPLQVHRPDEAP 72

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    + ++LE+ G  A++   +TLE A  + ++F+++ LV+ L  +TV+ G   RF
Sbjct: 73  ELLTGDEDRLELLEQTGLDAVLLLPYTLEFARQTPQEFVERYLVDGLRARTVVVGRDVRF 132

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA---------------L 174
           G   +GD   +   GE+YGF    ID++    +    S+  R A               L
Sbjct: 133 GWQNSGDLSTMVALGERYGFEVEVIDDVTPAAAADPGSAEDRAADPLRRRWSSTWARELL 192

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ 233
             G V+ AA +LG    +   V+HG+  GR LG+PTAN+      ++  +GVYA   R  
Sbjct: 193 AAGDVVQAARVLGRPHRVRGTVVHGDARGRELGYPTANLGGDLAGMVPADGVYAGWLRRT 252

Query: 234 DQTSYSGV------------ANFGRNPTMVPNG-PLLLESFI-FDFSQEIYGQRCTVSFF 279
                S V             + G NPT   +G    +E+++      ++Y Q+  V   
Sbjct: 253 RHADGSPVDPHEGDVVLPAAVSIGTNPTF--DGVERRVEAYVLDRDDLDLYDQQVVVELV 310

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + LRP ++F  +E L   MGED ++ R +L  +
Sbjct: 311 ERLRPTLRFDSVEALLERMGEDVERVRVVLAGT 343


>gi|260654729|ref|ZP_05860217.1| riboflavin biosynthesis protein RibF [Jonquetella anthropi E3_33
           E1]
 gi|260630444|gb|EEX48638.1| riboflavin biosynthesis protein RibF [Jonquetella anthropi E3_33
           E1]
          Length = 303

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG FDG H GH  +   A K++     P  V++F P PRT++  +  +  L   +   K+
Sbjct: 5   IGAFDGYHRGHQALFAAASKMSQQLEKPWRVVTFQPRPRTVLAGAETV--LFTDAEMTKL 62

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
               G    ++  F     +   E F++++L   + +  V+ G  FRFG  R+G    L 
Sbjct: 63  DRWFGLLEPVKLSFDERLRSLPPEAFLEELLRS-VHLDGVVVGQDFRFGYRRSGGEAELS 121

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +    +      +  +++ + Q VSS+ +R  +  G V  A  LLGY +     V +G+ 
Sbjct: 122 RWCSAHRVWLDIVPSVQDPEGQTVSSTRLRKIVASGDVTGARRLLGYGWFASGTVENGQG 181

Query: 202 IGRTLGFPTANMQLSPDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            G+TLGFPTANM L P   L+  +GVYA      D  +Y+   + G NPT        +E
Sbjct: 182 RGKTLGFPTANMSL-PGTKLRPADGVYAGAALV-DGHAYAAAISVGINPTFGDVTERRVE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           +F+ D   ++Y +   + F   LRP I+F++ ++L + +G D  ++R++    +P
Sbjct: 240 AFLLDMEGDLYRRPVDLFFLQRLRPMIRFQNSDELSLQIGRDADRSRELFARLWP 294


>gi|289670398|ref|ZP_06491473.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 281

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 136/263 (51%), Gaps = 17/263 (6%)

Query: 56  NPHPRTIIQSSSPIFTLSPPSI---QEKILEKMGFSA----LIRYKFTLETANYSAEQFI 108
            P PR     ++P     PP +   + KI    GF A    +IR+   L  +  SAE F+
Sbjct: 4   EPLPREFFAPAAP-----PPRLTLARAKIEGLYGFGADSVGMIRFDGRL--SKMSAEDFV 56

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +  LV  L  + V  G +FRFG  R GD  +L   GE++GF    I  +  +  +I S++
Sbjct: 57  RLALVGRLCAREVWIGPEFRFGHRRGGDIRLLHMLGEQHGFVAGEIAPVHLHGERI-SAT 115

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            IR  L  G   +A  LLG  + I   V+ G+++GR+LG+PTAN++  P      G+YA 
Sbjct: 116 RIRELLVAGEFAHAGDLLGRPYAIGGRVVRGKQLGRSLGYPTANLRF-PRTPALSGIYAT 174

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                 +T +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF
Sbjct: 175 WVHGVAKTPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKF 233

Query: 289 KDIEKLKIYMGEDEKKARKILES 311
             +E L + M  D  +AR++L +
Sbjct: 234 DGLEALTVQMHRDAGQAREVLAA 256


>gi|94676756|ref|YP_588984.1| riboflavin biosynthesis protein RibF [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|94219906|gb|ABF14065.1| riboflavin biosynthesis protein RibF [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 327

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 4/292 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG H GH  ++   Q        P  V+ F P P+     +     L+   
Sbjct: 16  GCVLTIGNFDGFHRGHQALINKLQTEGRRRRLPAIVIIFEPQPQEYFAGTKAQVRLTRFR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L   G  A++   F    +N SA+ F+  +LV  L  + +  G  F FGK R G+
Sbjct: 76  DKVKYLATAGVDAILCITFNKYFSNLSAKTFLFDILVHKLGGRLICVGDDFCFGKCRQGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+    + GF  + I        Q +SS+ IR AL +  +  A  LLG+ + I   V
Sbjct: 136 LTMLKHASNQVGFDIINIMTYNTEDGQRISSTAIRQALVQDRLDEAEMLLGHLYRISGRV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV--PNG 254
           I+G+ +GR +GFPTAN+ L   +    GVYA++     +    G+AN G  PT+    + 
Sbjct: 196 IYGDALGRIIGFPTANISLKGRLAPLNGVYAVQVYGITKDPLPGIANIGTRPTVTNYSHN 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              +E  + D +  +YG    V     +R E +F  +E+LK  +  D    R
Sbjct: 256 QQHMEVHLLDVTLNLYGYHLEVIILAKIRKEQRFASLEELKQQIVNDIANVR 307


>gi|269123533|ref|YP_003306110.1| riboflavin biosynthesis protein RibF [Streptobacillus moniliformis
           DSM 12112]
 gi|268314859|gb|ACZ01233.1| riboflavin biosynthesis protein RibF [Streptobacillus moniliformis
           DSM 12112]
          Length = 339

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 30/316 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            +V +GNFDG+HLGHH I+ +A+++    N  + + +F  +P+   +  + I TLS    
Sbjct: 32  NIVVLGNFDGVHLGHHKIINEALELGKKLNQKVLIYTFREYPK---KKDTLITTLSEKLY 88

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD- 136
              I EKM    +   +F  +    S E F+  +L++ L    +  G  + FG  + GD 
Sbjct: 89  ---IFEKMNLDYIYLEEF-FDVNELSPEDFVNNILIDKLNASEIFCGFNYSFGNRKKGDV 144

Query: 137 -------RGILQKRGEKYGFHTVFIDELR-----------NNKSQIVSSSNIRTALTKGH 178
                  +G ++          +  DEL+           +    ++SS+ I+T +  G 
Sbjct: 145 IKLNELLKGKIKVNVINPVLFNLKTDELKIVDIKELKDYLDKDYCLISSTFIKTLIENGK 204

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTS 237
           +     LLG+ + I   V+HG+K+ RTLGFPTAN+     I     VY +R   +    +
Sbjct: 205 MSYVKKLLGHEYIIMGKVVHGKKLARTLGFPTANLLSRNKIYPLFAVYGVRTHIEGYDRA 264

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+ N G+NPT + N  L +E+ IFDF ++IY +   V   + +R E K   +E+LK  
Sbjct: 265 YYGIMNIGKNPT-IDNEGLHIETHIFDFDEDIYDKVIVVDLLENIRLERKMCSLEELKKQ 323

Query: 298 MGEDEKKARKILESSY 313
           +  D+K  ++ +   Y
Sbjct: 324 ILMDKKIWKEKIYDKY 339


>gi|326771724|ref|ZP_08231009.1| riboflavin biosynthesis protein RibF [Actinomyces viscosus C505]
 gi|326637857|gb|EGE38758.1| riboflavin biosynthesis protein RibF [Actinomyces viscosus C505]
          Length = 341

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 162/333 (48%), Gaps = 22/333 (6%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANN------SP 49
           M V++  E    +P  L      G VV +G FDG+H GH  +L + +++++        P
Sbjct: 1   MEVWYGAE---QVPASLSAPGGPGAVVTMGIFDGVHRGHQAVLGRVVELSHELAHGDLRP 57

Query: 50  ITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           + V ++F+PHPR++ Q  + +  ++  + +   L  +G  A++   +TL+ A  S + F+
Sbjct: 58  LAVAVTFDPHPRSVHQPEADLPLIASLTDRLASLGDLGLDAVLVITYTLDFAAQSPQDFV 117

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +  L E L  + V+ G   RFG   +GD   L++ G + GF    +  + +++ +  SS+
Sbjct: 118 RTWLEELLGARAVVVGDDVRFGWRNSGDAATLEQIGRQDGFEVEIVSTICSDEGRRWSST 177

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYA 227
            IR  L  G++   + +LG    +   V+ G + GR LGFPTAN++ +   ++  +GVYA
Sbjct: 178 WIRQCLKDGNMRQVSRVLGRPHRLRGVVVRGLRRGRELGFPTANLEAATAGVVPPDGVYA 237

Query: 228 ---IRFRTQ--DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDY 281
              IR      D        + G NPT        +E+ +   +   +YG+   V   + 
Sbjct: 238 GWLIRGCADEGDVQRLPAAISIGTNPTFDDVPQRTVEAHVLGRADLNLYGEEVGVELVER 297

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           LRP + F  ++ L + M  D +   +IL    P
Sbjct: 298 LRPMLAFDGLDALLVQMRADIEDTARILGVPVP 330


>gi|296876752|ref|ZP_06900800.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432254|gb|EFH18053.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 15912]
          Length = 314

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 13/295 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A +IA    + V  L+F   P+       P  +  L  P 
Sbjct: 19  VLVLGYFDGLHLGHQELFKKARQIAGEKGLKVALLTFPESPKLAFVRYQPELLLHLQSPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  + FG D+   
Sbjct: 79  DRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSFGSDKKNA 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +      +    +  +D+      + +SS+ IR A+ +G V  AA LLG+  +    V
Sbjct: 138 SDLAAYFDGQVEVISPVLDQ-----GEKISSTRIRQAVLEGRVQEAARLLGHPLSSRGIV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+G+PTAN+  +    L  +GVY +    + Q  Y G+A+ G+N T      
Sbjct: 193 VHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQI-YRGMASVGKNVTF-DGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R   E
Sbjct: 251 LRFEVNLFDFSGDIYGHTLTIHWLDKIREMVKFDGIDQLVAQLKEDEAVSRNWTE 305


>gi|259503131|ref|ZP_05746033.1| riboflavin biosynthesis protein RibF [Lactobacillus antri DSM
           16041]
 gi|259168997|gb|EEW53492.1| riboflavin biosynthesis protein RibF [Lactobacillus antri DSM
           16041]
          Length = 300

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 11/301 (3%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSIQEK 80
           +G FDG+H GH  ++  A +IA     P+ VL+++  P  +       F  LS    + +
Sbjct: 1   MGFFDGVHRGHQAVIGTAKRIAKQRGLPLAVLTYDHAPGIVYHQYPDGFDYLSTTKRKLE 60

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGDRGI 139
           +LE++G   +    FT   A+ +   F+   L      + V+ G    +G +D A    +
Sbjct: 61  LLEELGVDLVYLVSFTSAYASLAPADFVADYL-RAFHSQVVVAGFDHTYGTRDVATMERL 119

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
            +  G ++   TV    L +     V S  IR  +  G V  A   LGYR+     V+HG
Sbjct: 120 PKYAGGQFEVVTVPKFTLADQPDVKVGSRQIRQLIATGQVGAANDALGYRYQTSGLVVHG 179

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
              GRTLGFPTAN++   + LL   GVYA+  +      Y G+A+ G N T      L +
Sbjct: 180 LARGRTLGFPTANIEAPENELLPGIGVYAVTVQVGGHW-YGGMASVGHNITFGKAAKLTV 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL----ESSYP 314
           E ++FDF Q IYG+   V ++ YLR E KF   ++L   M  DE  AR+IL    ++++P
Sbjct: 239 EIYLFDFQQMIYGEEVKVRWYQYLRGEEKFAGADELVAQMKHDEANARQILARAQQTNWP 298

Query: 315 L 315
           L
Sbjct: 299 L 299


>gi|257455747|ref|ZP_05620975.1| riboflavin biosynthesis protein RibF [Enhydrobacter aerosaccus
           SK60]
 gi|257446875|gb|EEV21890.1| riboflavin biosynthesis protein RibF [Enhydrobacter aerosaccus
           SK60]
          Length = 339

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 144/311 (46%), Gaps = 27/311 (8%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFT 71
           P  L   V+ IGNFDG+HLGH  +L++A  +A    +   V+ F P PR      +    
Sbjct: 15  PTLLPDSVLTIGNFDGVHLGHQAMLDKAKSLAKCQQLASMVMIFEPQPREFFSPQTAPAR 74

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + + +++ +    +LI   F  +  N SA  F  K+LV+ L VK ++ G  FRFG 
Sbjct: 75  LTNLAEKTQLIAEHRIDSLIVANFDNDFRNLSAHDF-AKMLVK-LNVKHLVLGDDFRFGH 132

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR GD   L+  G          D    ++   VSS+ IR  L +G +  A HLLG  + 
Sbjct: 133 DRTGDSEFLRVFGLPVQILHTVTDHAHQDER--VSSTRIRDCLQQGDLATAKHLLGRDYA 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS------------ 239
           I   V HG+KIGRTL FPTAN+ L+       G++A+     D T  S            
Sbjct: 191 ITGMVEHGDKIGRTLDFPTANIALNRIKPALHGIFAVSVTATDGTDLSTLGRNSQTGVQG 250

Query: 240 -------GVANFGRNPTMVPNGPL--LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
                  G  N G  P +     +   LE     F  ++YG+  TV+F  +L  E  +  
Sbjct: 251 LTKGSLFGACNVGTRPALKNKYGVEWRLEVNFPKFDGDLYGKELTVTFLHFLHGEKNYAG 310

Query: 291 IEKLKIYMGED 301
           ++ LK  + +D
Sbjct: 311 LDALKQGIAQD 321


>gi|227524403|ref|ZP_03954452.1| FAD synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088634|gb|EEI23946.1| FAD synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 318

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 10/299 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG H GH  +L++A + A  + + + VL+++ HP  + +  SS     ++   
Sbjct: 21  VIAMGFFDGFHTGHQAVLQRAKEEAQKHGTKLVVLTYDHHPALVYKKMSSHEKRYITLLD 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K+ ++ G   ++   ++ +  + S ++FIQ  L  +  +  V+ G    +G + A +
Sbjct: 81  YKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQHFLSRFNPI-AVVAGFDHTYGGEPADN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K      F  + +  L+ N  Q VSS+ IR  L  GH+     LLG  F  E  +
Sbjct: 140 MVNLPKYVNG-AFKVITVPALKQN-DQKVSSTQIRNNLDNGHIEKVNQLLGRPFQTEGVI 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE+ GR LG+PTAN++ S    L   G+Y +      +  Y G+A+ G+N T   NGP
Sbjct: 198 VHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI-GRKKYLGMASIGKNVTFSDNGP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           + +E  + DF Q IYG+   V++  + R EIKFK  + L   +  DE+  R  L S +P
Sbjct: 257 MTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTADDLVEQLDRDEQDTRHYL-SEHP 314


>gi|148543934|ref|YP_001271304.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus reuteri
           DSM 20016]
 gi|184153330|ref|YP_001841671.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri JCM
           1112]
 gi|227364843|ref|ZP_03848890.1| FAD synthetase [Lactobacillus reuteri MM2-3]
 gi|325682531|ref|ZP_08162048.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri MM4-1A]
 gi|148530968|gb|ABQ82967.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus reuteri
           DSM 20016]
 gi|183224674|dbj|BAG25191.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri JCM
           1112]
 gi|227070106|gb|EEI08482.1| FAD synthetase [Lactobacillus reuteri MM2-3]
 gi|324978370|gb|EGC15320.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri MM4-1A]
          Length = 315

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 149/295 (50%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDG+H GH  +++ A +IA     P+ VL+++  P  + +     F  LS    
Sbjct: 21  VLAMGFFDGVHRGHQAVIKCAREIAREKGLPLVVLTYDHAPGIVYRQYKGGFKYLSTVDR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L  +    +    FT   A+ S +QF+ + LV +   +TV+ G    +GK+     
Sbjct: 81  KLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF-HAQTVVAGFDHTYGKEDIASM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            +L K      F  V + +   + SQ  V S  IR  +  G+V  A   LGY +     V
Sbjct: 140 KLLPKYAAGR-FEVVTVPKFTEDGSQEKVGSREIRKLIDAGNVEAANQALGYPYQTTGLV 198

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRTLGFPT N++   +  +   GVYA++ +   +  Y G+A+ G N T      
Sbjct: 199 VHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVKLSKKW-YDGMASVGHNITFGDANQ 257

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L +E  +FDF Q +YG+   V ++ YLR E KF   + L   M +DE+ AR ILE
Sbjct: 258 LTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADALVAQMKQDEQDARHILE 312


>gi|237744290|ref|ZP_04574771.1| riboflavin kinase [Fusobacterium sp. 7_1]
 gi|229431519|gb|EEO41731.1| riboflavin kinase [Fusobacterium sp. 7_1]
          Length = 319

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + ++ A  N     V +F  HP  I+        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETVRAARENGKRAVVFTFANHPMEILFPEKKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   ++  K       Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVVMQKVDKNFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A  LL +   I  +VI
Sbjct: 138 LEYLAE---IHNIKVTELPPVTLDGELVSSSAIRKKIANSDFDGAVKLLDHPMIIIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPYGIYGAFLQVGDKNSKVLYGVVNVGCNPTL--KHE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF++E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 MSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|227513188|ref|ZP_03943237.1| FAD synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083569|gb|EEI18881.1| FAD synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 318

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 10/299 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG H GH  +L++A + A  + + + VL+++ HP  + +  SS     ++   
Sbjct: 21  VIAMGFFDGFHTGHQAVLQRAKEEAQKHGTKLVVLTYDHHPALVYKKMSSHEKRYITLLD 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K+ ++ G   ++   ++ +  + S ++FIQ  L  +  +  V+ G    +G + A +
Sbjct: 81  YKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQHFLSRFNPI-AVVAGFDHTYGGEPADN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K      F  + +  L+ N  Q VSS+ IR  L  GH+     LLG  F  E  +
Sbjct: 140 MVNLPKYVNG-AFKVITVPALKQN-DQKVSSTQIRNNLDNGHIEKVNQLLGRPFQTEGVI 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE+ GR LG+PTAN++ S    L   G+Y +      +  Y G+A+ G+N T   NGP
Sbjct: 198 VHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI-GRKKYLGMASIGKNVTFSDNGP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           + +E  + DF Q IYG+   V++  + R EIKFK  + L   +  DE+  R  L S +P
Sbjct: 257 MTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTADDLVEQLDRDEQDTRHYL-SEHP 314


>gi|254796438|ref|YP_003081274.1| riboflavin biosynthesis protein RibF [Neorickettsia risticii str.
           Illinois]
 gi|254589675|gb|ACT69037.1| riboflavin biosynthesis protein RibF [Neorickettsia risticii str.
           Illinois]
          Length = 303

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 7/278 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV  GNFDG+HLGH  +L     ++    +   V++F+PHP   ++S      L      
Sbjct: 15  VVTFGNFDGVHLGHLALLSALSSVSKLDALHRVVITFDPHPFCFLKSKKDF--LITDQYT 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +L      +L   KF  +    S E+F+ K L  +L +K ++     RFGK  +G   
Sbjct: 73  KSVLLSPYVDSLYFIKFDDDLRGLSPEEFL-KFLSSFLNLKYLVNAENCRFGKFSSGSIT 131

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++K  E   +  V I    N+     SS+ +R ++  G +L+A  LLG   +I   +  
Sbjct: 132 EIEKYQELLSYEAVVIKPELNDSGNRYSSTLVRASIKNGDMLSARRLLGRYHSIRGIIRR 191

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
              +  T+GFPT N+ +  +I+  K GVY +    +  T YSG+AN G+ PT   +G ++
Sbjct: 192 DRGLASTIGFPTINIAIPEEIIKPKLGVYVVDVSIE-GTVYSGIANIGKRPTTSDSGDVI 250

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           LE  IF+FS  +YG+  TV    +LR E  F  +E+LK
Sbjct: 251 LEVHIFNFSDNVYGKDATVYLKAFLREEKHFPSVERLK 288


>gi|86148865|ref|ZP_01067122.1| hypothetical protein MED222_01182 [Vibrio sp. MED222]
 gi|85833349|gb|EAQ51550.1| hypothetical protein MED222_01182 [Vibrio sp. MED222]
          Length = 222

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 3/199 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P P  +         L+   
Sbjct: 16  GCVLTIGNFDGVHLGHQEVLSQVSKQATALGLPSVVMTFEPQPMELFAKGRAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L K+  S L+   F    A+ SA+ FI+++LV+ L VK ++ G  F FGK R G+
Sbjct: 76  DKYVQLSKLEISRLLCVNFNQYFASLSAKAFIKELLVDKLGVKFLVVGDDFCFGKGRTGN 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++ GEKYGF  V       N+ + VSS+ IR AL    ++++A +LG  ++I   V
Sbjct: 136 FAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAANDLVSSATMLGRDYSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQL 215
            HG K+GRT+GFPTAN+ L
Sbjct: 195 SHGRKLGRTIGFPTANIPL 213


>gi|312867703|ref|ZP_07727909.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           F0405]
 gi|311096766|gb|EFQ55004.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           F0405]
          Length = 306

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A +IA+   + V  L+F   P+       P  +  L  P 
Sbjct: 19  VLVLGYFDGLHLGHQELFKKARQIADEKGLKVALLTFPESPKLAFVRYQPELLLHLQSPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  +  G D+   
Sbjct: 79  DRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSLGSDKKTA 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +      +    +  +D+      + +SS+ IR A+ +G V  AA LLG+  +    V
Sbjct: 138 SDLAAYFDGQVEVISPVLDQ-----GEKISSTRIRQAILEGRVQEAARLLGHPLSSRGIV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+G+PTAN+  +    L  +GVY +    + QT Y G+A+ G+N T      
Sbjct: 193 VHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQT-YRGMASVGKNVTF-DGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R
Sbjct: 251 LRFEVNLFDFSGDIYGHTLTIRWLDKIREMVKFDGIDQLVAQLEEDEAVSR 301


>gi|325520798|gb|EGC99808.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia sp. TJI49]
          Length = 287

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 14/291 (4%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      +PP I   ++K+  L   G   ++   F    A+ + + F+++ LV  L 
Sbjct: 61  FNPAG-----APPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQTPQAFVERTLVGGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G
Sbjct: 116 TRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRAALAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++        
Sbjct: 176 DLDAAASALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAP 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
             GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF
Sbjct: 236 LPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKF 286


>gi|325282580|ref|YP_004255121.1| riboflavin biosynthesis protein RibF [Deinococcus proteolyticus
           MRP]
 gi|324314389|gb|ADY25504.1| riboflavin biosynthesis protein RibF [Deinococcus proteolyticus
           MRP]
          Length = 296

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 138/280 (49%), Gaps = 13/280 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVAIG+FDG+HLGH  +L Q    A     P  V +F+P  + + +    + TL P  + 
Sbjct: 16  VVAIGSFDGVHLGHQALLAQLKAKAREYRVPSVVYTFDPPTKVLTKGVEYLSTL-PEKLD 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    +   FT E A      F+  +    L  + V+ G  F FGK RAG  G
Sbjct: 75  --LLTVYGIDETVAVPFTPEFAARDKSAFLDDL--RLLRPRAVVVGEDFYFGKARAG--G 128

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +   R        V +  +     + + S+ +R  L +G V  AA LLG  +  +  V+ 
Sbjct: 129 VDDLRDVT---RDVMVVPIHGVSGEDIKSTRVREYLREGDVTGAARLLGRPYAAQGVVVQ 185

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+++GRT+G+PTAN+++     L  GV+A+R       S+ G+AN G  PT V       
Sbjct: 186 GDQLGRTIGYPTANIRVPEGKALPRGVFAVRVADDRGGSWGGMANIGVRPT-VGGEERRF 244

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           E  +FDF+ ++YGQ   V F   LR E +F  +++L+  +
Sbjct: 245 EVNLFDFAGDLYGQELQVQFVARLRGEQRFSGLDELQAQL 284


>gi|311744156|ref|ZP_07717961.1| riboflavin biosynthesis protein RibF [Aeromicrobium marinum DSM
           15272]
 gi|311312511|gb|EFQ82423.1| riboflavin biosynthesis protein RibF [Aeromicrobium marinum DSM
           15272]
          Length = 301

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 15/301 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQ----AIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPP 75
           +V IGNFDG+H GH  ++++    A  +A   P  V ++F+PHP  +         L+  
Sbjct: 1   MVTIGNFDGVHRGHRHVVDRCRELAAALAPPVPTVVAVTFDPHPVQVFAPERAPVRLTSL 60

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L   G   +    F    A +S E+F+++VLV+ L    V+ G  FRFG   AG
Sbjct: 61  TRRVRLLRDAGADEVRVLAFDHAMAAWSPEEFVRRVLVDDLHAAAVVVGENFRFGHRAAG 120

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQ+ GE++ F  V      +   +  SS+ +R  +  G V  AA +LG  F +E +
Sbjct: 121 DVALLQRLGEEHDF--VAEGLALDGGDEDHSSTLVRRLVATGDVTGAADVLGRPFAVEGE 178

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G++ GR +G+PTAN+  +  + +  +GVYA  F            + G NPT     
Sbjct: 179 VVRGDQRGREIGYPTANVPVVDGEAVPADGVYAGWFVRASGERLPAAVSVGTNPTF-DGT 237

Query: 255 PLLLESFIF--DFSQ----EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              +ES++   D S     ++YG+   V F   LR   ++  ++ L   M  D   AR+ 
Sbjct: 238 ERRVESYVMASDGSARHDLDLYGEHVVVEFVLRLRAMERYDGLDALLEQMAADVDDARRA 297

Query: 309 L 309
           L
Sbjct: 298 L 298


>gi|322391870|ref|ZP_08065335.1| riboflavin biosynthesis protein RibF [Streptococcus peroris ATCC
           700780]
 gi|321145350|gb|EFX40746.1| riboflavin biosynthesis protein RibF [Streptococcus peroris ATCC
           700780]
          Length = 313

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 13/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDGIHLGH  +   A KIA    ++V  ++F+  P+  ++  SP  +  +  P 
Sbjct: 30  VLVLGYFDGIHLGHQKLFSIAGKIAEEKRLSVALITFHESPKLTLKPYSPENLLHILNPD 89

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+  ++ G   L    F+   AN +A++F+    V+ ++  T++ G  +  G DR   
Sbjct: 90  ERERKFKRAGVENLYLMDFSSRVANMTAQEFVD-TFVKEVKADTIVVGFDYSLGTDRKSA 148

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +     E +    V +  + + K +I SS+ IR A+ +G V  A  LLG        V
Sbjct: 149 EDL----KEIFDGEVVVVPPVEDEKGKI-SSTRIRQAILEGDVKEAGQLLGSPLPTRGIV 203

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    + +  Y G+A+ G+N T      
Sbjct: 204 VHGNARGRTIGYPTANLVLLDRTYMPADGVYTVDIEIK-RKLYRGMASVGKNVTF-DGEE 261

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              E  IFDF ++IYG+  TV + D +R  +KF  +EKL   + ED+K A+K
Sbjct: 262 ERFEVNIFDFDEDIYGETVTVYWLDRIRDMVKFDSVEKLVKQLEEDKKVAQK 313


>gi|256851253|ref|ZP_05556642.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           27-2-CHN]
 gi|260660677|ref|ZP_05861592.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           115-3-CHN]
 gi|282934721|ref|ZP_06339964.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|297206120|ref|ZP_06923515.1| FAD synthetase [Lactobacillus jensenii JV-V16]
 gi|256616315|gb|EEU21503.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           27-2-CHN]
 gi|260548399|gb|EEX24374.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           115-3-CHN]
 gi|281301296|gb|EFA93597.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|297149246|gb|EFH29544.1| FAD synthetase [Lactobacillus jensenii JV-V16]
          Length = 312

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 157/291 (53%), Gaps = 9/291 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H+GH  ++++A ++A     P+ VL+F+ HP+ I    +    L     +
Sbjct: 20  VLALGFFDGVHIGHQKLIKRAQEVAKKKSLPLMVLTFDRHPKEIYLGRTDFEYLDNLPEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGDR 137
            + +EK+G   L    FT   +  S ++F+ +V+++ L+   V+ G  + +G KD A   
Sbjct: 80  AEKMEKLGVDYLAVAPFTEGFSKLSPQEFVDQVIIK-LKADAVVAGFDYTYGPKDIANME 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +      K  F  V + E  +   +I  S+ IR A+  G++  A +LLG  + +   V 
Sbjct: 139 NL--PYFAKNRFEIVILPEQTSGGCKI-GSTAIRQAIRNGNLELATNLLGSHYIMSGIVG 195

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG + G  LGFPT N+ L+   ++ K GVYA R     +  Y  + + G N T+     +
Sbjct: 196 HGLRNGHKLGFPTVNLVLNDRKVIPKIGVYATRTLVHGKW-YDSMTSVGYNVTIQTGKKI 254

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +ES +FDF ++IY +  ++ ++ Y R EIKF  +++LK  + +DEK+ RK
Sbjct: 255 YIESHLFDFDEDIYDEEISIEWYHYTRGEIKFSSLDELKEQLIKDEKEIRK 305


>gi|58584673|ref|YP_198246.1| FAD synthase [Wolbachia endosymbiont strain TRS of Brugia malayi]
 gi|58418989|gb|AAW71004.1| FAD synthase [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 342

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 41/319 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +  GNFDGIHLGH L +    KIA     P  +L+F PHP TI+ + +  F L     +
Sbjct: 16  ALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNN-FRLINQEQK 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++++   G   L    F    +  S + FI K+L++    K +I G    FG  R G+  
Sbjct: 75  KELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFGHKRLGNTL 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           IL+K  E YG+    ++ L  N  +I SSS+IR  + KG +  A  LLG  + +   V+ 
Sbjct: 135 ILRKHSETYGYSLTKLEPLTVN-GKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMK 193

Query: 199 GEKIGRTLGFPTANMQLSPDILLK----------------------EGVYAIRFRTQDQT 236
           G   GR +GFPT N+ +  D ++K                       G+Y  ++++ + T
Sbjct: 194 GALRGREIGFPTINIPIE-DCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETT 252

Query: 237 SYS--------------GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
             S              GV N G  PT       ++E  IFDF+++IY ++  +    ++
Sbjct: 253 EGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFI 312

Query: 283 RPEIKFKDIEKLKIYMGED 301
           R E +F  +++L   +  D
Sbjct: 313 RSEKRFLSVDELTKQINHD 331


>gi|227510259|ref|ZP_03940308.1| FAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227189911|gb|EEI69978.1| FAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 10/299 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG H GH  +L++A + A  + + + VL+++ HP  + +  SS     ++   
Sbjct: 21  VIAMGFFDGFHKGHQAVLQRAKEEAQKHGTKLVVLTYDHHPALVYKKMSSHEKRYITLLD 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K+ ++ G   ++   ++ +  + S ++FIQ  L  +  +  V+ G    +G + A +
Sbjct: 81  YKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQHFLSRFNPI-AVVAGFDHTYGGEPADN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K      F  + +  L+ N +Q VSS+ IR  L  GH+     LLG  F  E  +
Sbjct: 140 MVNLPKYVNG-AFKVITVPALKQN-NQKVSSTQIRNNLDNGHIEKVNQLLGRPFQTEGVI 197

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE+ GR LG+PTAN++ S    L   G+Y +      +  Y G+A+ G+N T   NGP
Sbjct: 198 VHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI-GRKKYLGMASIGKNVTFSDNGP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           + +E  + DF Q IYG+   V++  + R EIKFK  + L   +  DE+  R  L S +P
Sbjct: 257 MTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTADDLVEQLDRDEQDTRHYL-SEHP 314


>gi|298373600|ref|ZP_06983589.1| riboflavin biosynthesis protein RibF [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274652|gb|EFI16204.1| riboflavin biosynthesis protein RibF [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 305

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 139/286 (48%), Gaps = 7/286 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  +L+     A  N     V++F  +P+        I  L+  + +
Sbjct: 16  VATIGFFDGVHLGHKFLLDSVADEARRNGKKSVVVTFVHNPKKFFDCRYDIRQLTTTAEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +        +   F  + A  +A+ F+   L     + T+  G    FG DR  D  
Sbjct: 76  TPKISSCDIDYCLLLDFDQQIATQTAKDFLA-FLKHSFCLDTLFVGYDHTFGSDRIRDFD 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++      G       E  +   Q VSSS IR  L  G +L A  +LGY+++++  V+H
Sbjct: 135 KIEAICNAMGI-KAHKSEQFDLTGQTVSSSRIREYLHNGKILEANAMLGYKYSLKGIVMH 193

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+ IGRTLGFPTAN+++  D LL   GVYA+     D   + G+ N G  PT V      
Sbjct: 194 GQMIGRTLGFPTANLKIISDKLLPHNGVYAVEV-IIDGIRHKGMLNIGNRPT-VDGVNHT 251

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           +E  IFDF ++IYG+   V F  ++R E+KF  +E+LK  +  D +
Sbjct: 252 VEVNIFDFDRDIYGKEIEVVFCRFVRDEVKFSSLEELKTQLNIDRQ 297


>gi|313892640|ref|ZP_07826227.1| riboflavin biosynthesis protein RibF [Dialister microaerophilus
           UPII 345-E]
 gi|313119037|gb|EFR42242.1| riboflavin biosynthesis protein RibF [Dialister microaerophilus
           UPII 345-E]
          Length = 312

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 10/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDGIH GH  IL Q  K+A        +++F PHP ++I   +P+  L   + +
Sbjct: 17  VFAIGFFDGIHKGHQEILNQTKKLAAKKSAKSGIITFYPHPLSVIFPENPVKLLLTQTEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL+K     +I  K  +E  + S E+F+ K L ++  +K +I G  F FG   +G+  
Sbjct: 77  YEILKKYNLDIIIEIKPDIEFLHQSHEEFLNK-LKKFSNLKGIIVGENFTFGYKGSGNAE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            ++K   K       I+ ++N    + ++SS+NIR  +  G++  A   LG  + I   +
Sbjct: 136 TMKKFF-KNEVEVKKINLIKNTLADNTVISSTNIRKFIADGNMREAMKFLGRPYFIADKI 194

Query: 197 IHGEKIG-RTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG K G   LG PTAN++   + +L  +GVYA     +    +  + N G NPT   + 
Sbjct: 195 VHGFKRGSELLGIPTANLEYGFERMLPSDGVYATYIEVKG-NKHPSITNIGTNPTF-NDK 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E+FI DF +EIYGQ   + + + +R EIKF+  + L + + +D KKA +IL+
Sbjct: 253 ERTIETFILDFDEEIYGQTVKLEWIEKIRDEIKFEKYQDLILQIKKDIKKAEEILK 308


>gi|299144052|ref|ZP_07037132.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298518537|gb|EFI42276.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 304

 Score =  132 bits (332), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 153/290 (52%), Gaps = 9/290 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR-TIIQSSSPIFTLSPPSI 77
           ++A+GNFDG+HL H  +L + +  +   N   ++L F  H + TI      + T +    
Sbjct: 17  IIALGNFDGVHLAHKKLLLKLVSESKKLNLKSSILIFKNHTKDTIYNKKQRLLTSNKQKF 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L  +G   +    F       S  +FI+K L + L+ + ++ G  ++FG    GD 
Sbjct: 77  E--MLRNIGIDIIYEIIFDDSIMKISPVEFIEKFLYKNLKARGIVAGYDYKFGYMAKGDI 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+    K       ID +  +   IVSSS IR  +  G++  A  LLGY +TI   +I
Sbjct: 135 ELLKNLSLKNNIKNFIIDAVIFD-GIIVSSSTIRNFIEDGNIEMANKLLGYNYTITGKII 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+ +G   G+PTAN+Q+  + ++ K GVY    + +++  Y   +N G+NPT+  NG L
Sbjct: 194 HGKNLGTKNGYPTANIQIDTNYVIPKFGVYDSDIKIKNKV-YKAASNIGKNPTIENNG-L 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            +ES I +F++ IYG+   +    +LRPE KF +I++L   + ED  K +
Sbjct: 252 RIESHILNFNKNIYGETVDLILLKFLRPESKFLNIDELFEKIKEDVNKVK 301


>gi|325694318|gb|EGD36232.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK150]
          Length = 310

 Score =  132 bits (332), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|197121072|ref|YP_002133023.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. K]
 gi|196170921|gb|ACG71894.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. K]
          Length = 323

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           + VF ++E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PH
Sbjct: 5   VQVFRSLE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRSAGVLTFEPH 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV
Sbjct: 64  PVRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFAARDLAGRLEV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+
Sbjct: 124 ADVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGN 181

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR---TQDQ 235
           V  AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R        +
Sbjct: 182 VEAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATT-GLLPANGVYVVRAELGGAHRE 240

Query: 236 TSYSGVA------NFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKF 288
           T  SG A      N G  PT+      + E+ +F F  +++YG    ++F   LR E +F
Sbjct: 241 TGLSGAAVHGGVCNVGVKPTVESGAAAVAEAHLFGFDGRDLYGTPIRLAFLARLRDEQRF 300

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E L+  +  D + A ++L
Sbjct: 301 PSVEALRAQIARDVEAAHRVL 321


>gi|281411513|ref|YP_003345592.1| riboflavin biosynthesis protein RibF [Thermotoga naphthophila
           RKU-10]
 gi|281372616|gb|ADA66178.1| riboflavin biosynthesis protein RibF [Thermotoga naphthophila
           RKU-10]
          Length = 293

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 149/303 (49%), Gaps = 33/303 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA----NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV+IG FDG+H+GH  +L    +I+    ++S I  +S+ P      +  SP F     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEISFFKKDDSLIYTISYPP------EYFSPNFPGLLMT 55

Query: 77  IQEKILEKMGFSALIRYKFTL-----ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++ ++        L RY  T+        + + E+F+++ L     V  V+ G  FRFGK
Sbjct: 56  VESRV------EMLSRYARTVVLDFFRIKDLTPEKFVERYLSG---VSAVVVGRDFRFGK 106

Query: 132 DRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + +GD   L+K+G E Y    + +  +R      VSSS IR  + KG        LG  F
Sbjct: 107 NASGDTSFLRKKGVEVYEIEDIVVQGIR------VSSSLIRDLVQKGRAEEIPVYLGRYF 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            IE  V    + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  P
Sbjct: 161 EIEGIVHRDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRP 220

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     +  E +I DF  ++YG++  +    ++R E KF  IE+LK  + +D K AR I
Sbjct: 221 TVGDARNVKYEVYILDFEGDLYGKKLKLEVLKFMREEKKFDSIEELKAAIDQDVKNARNI 280

Query: 309 LES 311
           ++ 
Sbjct: 281 IDD 283


>gi|307704965|ref|ZP_07641853.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK597]
 gi|307621475|gb|EFO00524.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK597]
          Length = 305

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +AE+F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAEEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGELLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+ AR
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVAR 302


>gi|32491044|ref|NP_871298.1| hypothetical protein WGLp295 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166250|dbj|BAC24441.1| ribF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 320

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 4/236 (1%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           ++ G V+ IGNFDG+HLGH  I+ +     +  N P+ V+ F P P+  I  +SP   ++
Sbjct: 16  YINGCVITIGNFDGVHLGHQKIISKLKNESLKRNLPMIVVIFEPQPKEFINKNSPS-RIT 74

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + K  +KMG   ++   F       +A+ FI+  L++ L +K +I G  FRFG   
Sbjct: 75  GLRDKIKYFKKMGIKQVLCINFNKNFLMLNAKDFIKNFLIKSLNMKCIIIGKDFRFGYKA 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +L+  G+K GF+ + +  L  + S+ +SS+ IR AL    +  A   LG+ ++I 
Sbjct: 135 YGDVKLLKNSGKKLGFNVLEVKTLEID-SEKISSTAIRNALKNNKLEKAIKFLGHEYSIS 193

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
             V+ G+ IGR +GFPT N+          GVYA+      +    G+AN G  PT
Sbjct: 194 GRVVCGKAIGRLIGFPTINISSKNIKFPINGVYAVEVNGITKKIIYGIANIGTRPT 249


>gi|90961551|ref|YP_535467.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius UCC118]
 gi|90820745|gb|ABD99384.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius UCC118]
          Length = 318

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 151/289 (52%), Gaps = 9/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++++AI+   +    + V++F+ HP+ I Q+           + 
Sbjct: 21  VLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRHPKIIFQNIDGEKFKYLTMLD 80

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+   + +G       KF    A  S + FI K +V  L    V+ G  + +GK    +
Sbjct: 81  EKLKHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GLHAICVVAGQDYTYGKHDIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +     K  F  + +D L+ N  Q +SS+ IR  L  G+V  A  LLGY++     V
Sbjct: 140 MDTISDFA-KGRFEIITVDHLQRN-DQKISSTQIRKDLDSGNVEAANLLLGYQYENHGTV 197

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNG 254
            HG K GR +GFPT N+ +   + +L EGVYA++ +  +D   Y G+A+ G N T   + 
Sbjct: 198 EHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKDNLWYEGMASIGHNETFGDDL 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              +E  +F+F + +YG++  V ++ +LR  +KF  +E+L   + +D++
Sbjct: 258 EKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEELIDQLNKDKR 306


>gi|154249095|ref|YP_001409920.1| riboflavin biosynthesis protein RibF [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153031|gb|ABS60263.1| riboflavin biosynthesis protein RibF [Fervidobacterium nodosum
           Rt17-B1]
          Length = 289

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 41/306 (13%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP------ 75
           + IG FDG+H GH  IL +  + A                   S S I+T+  P      
Sbjct: 3   ITIGVFDGVHRGHVKILSKLKECAERE---------------NSDSKIYTILYPMEYYTG 47

Query: 76  -------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                  S++++I  L   G   ++      +  + S E F +K+      VK ++ G  
Sbjct: 48  NFDGLITSVEDRIELLSIYGEPEILELP---KIQHLSPEGFFEKI---SQGVKGIVVGHD 101

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F+FGK+ +GD  +L+K  +  G     ++ ++ +  + VSSS IR  L KG VL A   L
Sbjct: 102 FKFGKNGSGDIRLLEKLCKDKGICLEVVEPVKVDNIR-VSSSYIRELLKKGDVLKAKDFL 160

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK--EGVYAIRFRTQDQTSYSGVANF 244
           G  ++I   V   ++IGR LGFPTAN++ S   L+    GVY ++    +Q  + G+ N 
Sbjct: 161 GRNYSIHGVVYKDKQIGRKLGFPTANVKRSEHFLIDPLAGVYLVKVYVPEQ--FYGLINV 218

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+     +  E +I DFS ++YG+   V F ++LRPE+KF +I +L   M ED K 
Sbjct: 219 GYRPTVEKTKKIKYEVYILDFSADLYGKEIRVEFLEFLRPELKFSNISELVAQMHEDVKI 278

Query: 305 ARKILE 310
           AR+I+E
Sbjct: 279 ARRIIE 284


>gi|302528529|ref|ZP_07280871.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
 gi|302437424|gb|EFL09240.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
          Length = 324

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 13/311 (4%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIF 70
           LP      VV IG FDG+H GH  ++++ +  A     P  VL+F+PHP  +++  S   
Sbjct: 13  LPGGWGRCVVTIGVFDGVHRGHQELIKRTVATAAERGVPSVVLTFDPHPSEVLRPGSHPA 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +++E +G        FTLE +  S  +F+ +VLV+ L    V+ G  F FG
Sbjct: 73  QLTTLRRKAELVEGLGVDVFCVLPFTLELSRLSPHEFVHEVLVDRLHAAAVLVGDNFTFG 132

Query: 131 KDRAGDRGILQKRGEKYGF-------HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
              AG+  +L++ G ++GF           +D+ R       SS+ +R+ +  G V+ AA
Sbjct: 133 AKAAGNVALLRELGRRFGFVAYGAELQGRSLDDDRGANDITFSSTYVRSCIDAGDVVAAA 192

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRF-RTQDQT-SYSG 240
             LG    +E  V+ G+  G  LG+PTAN+  +    +  +GVY   F R  D       
Sbjct: 193 DALGRPHRLEGIVVRGDGRGHDLGYPTANLSTARFAAVPADGVYTAWFSRLSDPARRLRA 252

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             + G NPT        +E+F+ D  ++ YGQ   + F   LR + +F     L   + E
Sbjct: 253 AVSVGTNPTF-SGRERTVEAFVLDVDEDFYGQHVALDFVTRLRDQARFGAPADLVKKIDE 311

Query: 301 DEKKARKILES 311
           D  + R+ L S
Sbjct: 312 DVARTRQALGS 322


>gi|227890639|ref|ZP_04008444.1| FAD synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867577|gb|EEJ74998.1| FAD synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 318

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 151/289 (52%), Gaps = 9/289 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++++AI+   +    + V++F+ HP+ I Q+           + 
Sbjct: 21  VLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRHPKIIFQNIDGEKFKYLTMLD 80

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+   + +G       KF    A  S + FI K +V  L    V+ G  + +GK    +
Sbjct: 81  EKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GLHAICVVAGQDYTYGKHDIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +     K  F  + +D L+ N  Q +SS+ IR  L  G+V  A  LLGY++     V
Sbjct: 140 MDTISDFA-KGRFEIITVDHLQRN-DQKISSTQIRKDLDSGNVEAANLLLGYQYENHGTV 197

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNG 254
            HG K GR +GFPT N+ +   + +L EGVYA++ +  +D   Y G+A+ G N T   + 
Sbjct: 198 EHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKDNLWYEGMASIGHNETFGDDL 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              +E  +F+F + +YG++  V ++ +LR  +KF  +E+L   + +D++
Sbjct: 258 EKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEELIDQLNKDKR 306


>gi|148269215|ref|YP_001243675.1| riboflavin biosynthesis protein RibF [Thermotoga petrophila RKU-1]
 gi|147734759|gb|ABQ46099.1| riboflavin kinase / FMN adenylyltransferase [Thermotoga petrophila
           RKU-1]
          Length = 293

 Score =  132 bits (331), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 148/303 (48%), Gaps = 33/303 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA----NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV+IG FDG+H+GH  +L    +IA    ++S I  +S+ P      +  SP F     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP------EYFSPNFPGLLMT 55

Query: 77  IQEKILEKMGFSALIRYKFTL-----ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++ ++        L RY  T+        + + E F+++ L     V  V+ G  FRFGK
Sbjct: 56  VESRV------EMLSRYARTVVLDFFRIKDLTPEGFVERYLSG---VSAVVVGRDFRFGK 106

Query: 132 DRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + +GD   L+K+G E Y    + +  +R      VSSS IR  + KG        LG  F
Sbjct: 107 NASGDTSFLRKKGVEVYEIEDIVVQGIR------VSSSLIRDLVQKGRAEEIPVYLGRYF 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            IE  V    + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  P
Sbjct: 161 EIEGIVHRDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHFPDGKKKFGVMNVGFRP 220

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     +  E +I DF  ++YG++  +    ++R E KF  IE+LK  + +D K AR I
Sbjct: 221 TVGDARNVKYEVYILDFEGDLYGKKLKLEVLKFMREEKKFDSIEELKAAIDQDVKNARNI 280

Query: 309 LES 311
           ++ 
Sbjct: 281 IDD 283


>gi|19704042|ref|NP_603604.1| FMN adenylyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714236|gb|AAL94903.1| Riboflavin kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 319

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++++ IK A  N     V +F  HP  I+        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLIKETIKAARENGKQAVVFTFANHPMEILFPEKKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   +I  K   +   Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVIMQKVDKDFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A   L +   +  +VI
Sbjct: 138 LEYLAE---VHNIKVTELPPVTLNGELVSSSVIRKKIANSDFEGAIKFLDHPMLVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  ++ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGNKNSQVLYGVVNVGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF++E+YG++  V    ++R E KF  I++LK  +  D
Sbjct: 253 ISLEVHILDFNKEVYGEKVYVQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|312622697|ref|YP_004024310.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203164|gb|ADQ46491.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 305

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 5/281 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG H+GH  + E     A+     V +F  HP  ++   +     +   ++   
Sbjct: 16  VALGFFDGFHIGHKKLFEVLNANASGIKKVVFTFKNHPDNLLGFDTKYILTNEERLE--F 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
               G   +   +F  +      ++FI+++L++ L V  V+ G  F FG    GD   L 
Sbjct: 74  FRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSVVVVGYDFTFGYMAEGDSKYLC 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           ++  ++G   + ID +   +  IVSS+ IR  + +G++  A  +LG+ F I   V  G +
Sbjct: 134 EKLYQFGRECIVIDPVMY-QEHIVSSTLIRRLILEGNIKLANCMLGFHFFISGTVKRGNR 192

Query: 202 IGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +G+ +GFPT N++   + I+ K+GVY       D+  Y  + N G NPT+  +  + +E+
Sbjct: 193 LGKKMGFPTINIKFDKEKIVPKKGVYVTNTIIDDK-RYLSITNVGTNPTVSTSDNIKIET 251

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            +    +++YG+R  + F D++R E KF +I++LK  + +D
Sbjct: 252 HVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQITQD 292


>gi|34762574|ref|ZP_00143569.1| Riboflavin kinase; FMN adenylyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|237741678|ref|ZP_04572159.1| riboflavin kinase [Fusobacterium sp. 4_1_13]
 gi|256845002|ref|ZP_05550460.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_36A2]
 gi|294785711|ref|ZP_06750999.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_27]
 gi|27887740|gb|EAA24814.1| Riboflavin kinase; FMN adenylyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|229429326|gb|EEO39538.1| riboflavin kinase [Fusobacterium sp. 4_1_13]
 gi|256718561|gb|EEU32116.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_36A2]
 gi|294487425|gb|EFG34787.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_27]
          Length = 319

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 12/286 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIGNFDG+H GH  ++ + IK A  N     V +F  HP  ++        ++    + 
Sbjct: 19  VAIGNFDGVHYGHKKLINETIKAARENGKQAVVFTFANHPMEVLFPERKFDYINTNEEKL 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +LE +G   ++  K       Y+  +F+ ++L   L+VK +  G  F FGK   G    
Sbjct: 79  YLLESLGVDVVVMQKVDKNFLEYTPLEFV-RILKNKLKVKEIFIGFNFSFGKGGVGKAED 137

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+   E    H + + EL       ++VSSS IR  +       A   L +   +  +VI
Sbjct: 138 LEYLAE---IHNIKVTELPPVTLDGELVSSSAIRKKIANSDFEGAVKFLDHPMLVIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV N G NPT+     
Sbjct: 195 HGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGDKNSKVLYGVVNVGYNPTL--KQE 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + LE  I DF++E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 253 ISLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKATIQAD 298


>gi|312862673|ref|ZP_07722913.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           F0396]
 gi|311101533|gb|EFQ59736.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           F0396]
          Length = 303

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 152/295 (51%), Gaps = 13/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA++    + VL+FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADDKQLEVAVLTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + E  G   L    F  + A  S++ FI +  ++ L+ + V+ G  ++FG  R
Sbjct: 76  APQRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIAR-YIKRLKAQEVVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +         V + E + +  + +SS+ +R  + +G V  A +LLG+ F+  
Sbjct: 135 T-DADYLARNFSG----RVHVIEEQQSDGEKISSTRVRQLIREGKVKEANYLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +    L  +GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   +  D+K A K
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCDQLEADKKIAEK 302


>gi|183981934|ref|YP_001850225.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium marinum M]
 gi|183175260|gb|ACC40370.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium marinum M]
          Length = 324

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 155/321 (48%), Gaps = 21/321 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSS 67
              +P      V+ +G FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRARGVPTVMMTFDPHPMEVVYPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + ++FI ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG    L+  GE++GF       + E  +N++   SS+ IR+ +  G V+ A  
Sbjct: 127 TFGKKAAGSVDTLRHAGERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVDAGDVMAATE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---- 237
            LG    +E  V+ G   G  LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 187 ALGRPHRVEGVVVRGYGRGAELGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGA 244

Query: 238 ------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF  +
Sbjct: 245 VIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVALDFVARIRGQKKFASV 303

Query: 292 EKLKIYMGEDEKKARKILESS 312
            +L   +G D ++ R +L + 
Sbjct: 304 PELVAEIGADTERTRVLLSTG 324


>gi|169334793|ref|ZP_02861986.1| hypothetical protein ANASTE_01199 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257531|gb|EDS71497.1| hypothetical protein ANASTE_01199 [Anaerofustis stercorihominis DSM
           17244]
          Length = 304

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 16/277 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +H F  ++ N+ L        +A G FDGIHLGH  I+E+  K   N    V++F+ HP 
Sbjct: 4   VHSFDAVDKNEPLS-------LAFGYFDGIHLGHRKIIEENNKDLKN---CVVTFDKHPM 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +I        L     +E  LEKMG   L    F     N +  QFI  ++++ + +K 
Sbjct: 54  DLINKDKSPKMLMTMEEKEGYLEKMGVDYLFIIHFDSNFMNLTDRQFIS-LVIDNVNMKK 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  + FGK+  G+   L+K  ++ GF    +DE + +  ++ S++ IR  + +G++ 
Sbjct: 113 MKVGFNYHFGKNGRGNADFLRKVSKEEGFELEVVDEYKIDDERVCSTA-IRNLIYEGNIS 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYS 239
            A   LG  ++I   V+ G+ +G+ +G PTAN+   P   + K GVY  R    D+  Y 
Sbjct: 172 KANKFLGRPYSITGKVVEGKHLGKQIGIPTANIFPDPVKAIPKRGVYVTRVTIDDEI-YY 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTV 276
           G++N G NPT   N    +E+ IFDF  +IYG+   V
Sbjct: 231 GISNVGINPTF--NEEPKVETNIFDFDGDIYGKEIKV 265


>gi|55821029|ref|YP_139471.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus LMG 18311]
 gi|55822948|ref|YP_141389.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus CNRZ1066]
 gi|55737014|gb|AAV60656.1| riboflavin kinase / FMN adenylyltransferase [Streptococcus
           thermophilus LMG 18311]
 gi|55738933|gb|AAV62574.1| riboflavin kinase / FMN adenylyltransferase [Streptococcus
           thermophilus CNRZ1066]
          Length = 303

 Score =  132 bits (331), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA+     + V +FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVFTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + +  G   L    F  + A  S++ FI +  +  L+ + ++ G  ++FG  R
Sbjct: 76  APQRRCDLFKAYGTDQLYLTDFNSDFARTSSDDFITR-YINRLKAQEIVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +        TV + E + +  + +SS+ +R  + +G+V  A +LLG+ F+  
Sbjct: 135 T-DTDYLDRNFSG----TVHVIEEQQSGGEKISSTRVRQLIREGNVKEANNLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +   IL  +GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTILPADGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   +  D+K A K+
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCDQLKADKKIAEKL 303


>gi|322376733|ref|ZP_08051226.1| riboflavin biosynthesis protein RibF [Streptococcus sp. M334]
 gi|321282540|gb|EFX59547.1| riboflavin biosynthesis protein RibF [Streptococcus sp. M334]
          Length = 305

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +AE+F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAEEFF-ATYIKAMNAKIIVAGFDYTFGSDQK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGELLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+ AR
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVAR 302


>gi|323343808|ref|ZP_08084035.1| riboflavin biosynthesis protein RibF [Prevotella oralis ATCC 33269]
 gi|323095627|gb|EFZ38201.1| riboflavin biosynthesis protein RibF [Prevotella oralis ATCC 33269]
          Length = 317

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 148/296 (50%), Gaps = 23/296 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSS---SPIFTLSPP 75
           V  IG FDG+H GH  ++E+    A  + +   V++F+ HPR I+ S      + TL   
Sbjct: 18  VATIGFFDGVHRGHQYLIERVKAEAATAQMASAVITFSCHPRQILHSEYVPELLTTLDGK 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            IQ   L K      I   F  + A  SA  F++K+L + L+V+ +I G   RFG +R+ 
Sbjct: 78  LIQ---LAKTKVDETIVLNFDKDMAALSARDFMEKILRDRLDVRKLIIGYDNRFGHNRSE 134

Query: 136 DRGILQKRGEKYGF----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
                 + G + G     H  F+    N     VSSS IRT L +G V  AA  LGY +T
Sbjct: 135 GFEDYARYGNELGIEVIRHPAFMLHGVN-----VSSSVIRTFLHQGEVEMAALCLGYPYT 189

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFR-TQDQTSYSGVANFGRNP 248
           I   V+ G + GR +GFPTAN+  S    ++   GVYA++ R  Q   +   + N G  P
Sbjct: 190 ISGKVVPGVQEGRKIGFPTANLDTSHYGQLIPANGVYAVKARLEQSIATLPAMMNIGMRP 249

Query: 249 TMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           T   NG  + LE+ I +FS ++YG+  +VSF   +R E KF   + L   +  D K
Sbjct: 250 TF--NGTDITLETHILNFSDDLYGKTLSVSFMHRIREEQKFDSPQDLMKQLQYDRK 303


>gi|332361833|gb|EGJ39636.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK355]
          Length = 310

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAVEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDEQ 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|93006866|ref|YP_581303.1| riboflavin biosynthesis protein RibF [Psychrobacter cryohalolentis
           K5]
 gi|92394544|gb|ABE75819.1| FMN adenylyltransferase / riboflavin kinase [Psychrobacter
           cryohalolentis K5]
          Length = 347

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 141/311 (45%), Gaps = 34/311 (10%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P  L   V+ IGNFDG+HLGH  +L Q  ++A   N    V+ F P PR     ++    
Sbjct: 22  PVALAPCVLTIGNFDGVHLGHQAMLTQVRELAKTRNLGSAVMIFEPQPREFFAPAAAPAR 81

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + ++ +L + G   LI   F  E  + SA+ F   +L + L V+ ++ G  F+FG 
Sbjct: 82  LTNLAEKQALLAEYGVETLIVAGFDNEFRSLSAQAF-ADILAQRLNVQALVLGDDFKFGH 140

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           DR GD   L+     YG H   +D +   N+K+  +SS+ IR  L  G +  A  LLG  
Sbjct: 141 DRTGDSQFLRD----YGLHVTNLDTITDDNHKAARISSTRIRDLLLAGDINAANALLGRD 196

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT------------- 236
           + I   V+ G+KIGRT+ FPTAN+ L        G++A+   + D               
Sbjct: 197 YAITGTVVGGDKIGRTMDFPTANIDLKRIKPALHGIFAVDVVSLDNDGNVIPSDLVRRAD 256

Query: 237 ------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                       S  G AN G  P++       LE        ++YG    V F  YL  
Sbjct: 257 DGHKGIAGLQAHSLFGTANIGTRPSVDKTHDWRLEVHFPQLQADLYGLTLQVRFLHYLHG 316

Query: 285 EIKFKDIEKLK 295
           E  ++ ++ LK
Sbjct: 317 ERHYESLDALK 327


>gi|327459837|gb|EGF06177.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1057]
          Length = 310

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQDLKIAVLTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAAGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  +FDFSQ+IYG    + + D +R  +KF+ I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNMFDFSQDIYGDTIRIFWLDKIREMVKFEGIDSLVAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|288574925|ref|ZP_06393282.1| riboflavin biosynthesis protein RibF [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570666|gb|EFC92223.1| riboflavin biosynthesis protein RibF [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 322

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 19/298 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII--QSSSPIFTLSPPS 76
           +V +G FDG HLGH  +   A  +A        V+SF PHP+T++  +  S +FT     
Sbjct: 2   IVVLGAFDGYHLGHQRLFSVASAMAERESCGWAVVSFTPHPKTVLMHERVSLLFTE---- 57

Query: 77  IQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            +EK+L  E +    +I++ FT   ++   E F   +  E + V  V+ G  FRFG++R 
Sbjct: 58  -EEKVLLREILSIPTMIQFPFTSRLSSMDPEDFFSYMDKE-IGVSGVVVGDNFRFGRERR 115

Query: 135 GDRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           GD   L +  RG+   F +V    +      +VSS++IR  ++ G +  A+  LGY F +
Sbjct: 116 GDVDTLSEICRGKGIPFSSVLPVTI---DGSVVSSTSIRDLISMGKISEASTRLGYPFFM 172

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
              VI G + GR +G PTAN+   S  I+ K GVYA       +   + ++  G NPT  
Sbjct: 173 RGHVIEGSRRGRKIGVPTANLSFPSTKIIPKPGVYAGAAYLDGEWCPAAIS-IGNNPTFG 231

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 +E  I D ++++Y Q   V FF+ LR E +F D E+L   + +D K+ + I 
Sbjct: 232 DISENRVEVHIIDKNEDLYDQTLYVLFFERLRSERRFLDPERLVSQLKDDIKRTKGIF 289


>gi|228477502|ref|ZP_04062138.1| riboflavin biosynthesis protein RibF [Streptococcus salivarius
           SK126]
 gi|228250937|gb|EEK10125.1| riboflavin biosynthesis protein RibF [Streptococcus salivarius
           SK126]
          Length = 303

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 13/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA+     + VL+FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + E  G   L    F  + A  S++ FI +  ++ L+ + V+ G  ++FG  R
Sbjct: 76  APKRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIAR-YIKRLKAQEVVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +         V + E + +  + +SS+ +R  + +G V  A  LLG+ F+  
Sbjct: 135 T-DADYLARNFSG----NVHVIEEQQSDGEKISSTRVRQLIREGKVKEANKLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +    L  +GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTFLPADGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   +  D+K A K
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCAQLEADKKIAEK 302


>gi|328946089|gb|EGG40235.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1087]
          Length = 310

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAAGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDF Q+IYG    + + D +R  +KF+ I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFYQDIYGDTIRIFWLDKIREMVKFEGIDSLVAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|332361488|gb|EGJ39292.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1056]
          Length = 310

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 142/303 (46%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIRDMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|313679897|ref|YP_004057636.1| fmn adenylyltransferase; riboflavin kinase [Oceanithermus profundus
           DSM 14977]
 gi|313152612|gb|ADR36463.1| FMN adenylyltransferase; riboflavin kinase [Oceanithermus profundus
           DSM 14977]
          Length = 295

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 15/289 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L +A  +A     P+ V +F+P  +  ++    + TLS    +
Sbjct: 16  VVAVGSFDGVHLGHQSLLAKARALAAQERLPLLVYTFDPPTKVFMRGVGMLSTLSE---K 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G    +   F  + A      F+  ++   LE + ++ G  F FG+ R+G   
Sbjct: 73  LDLLREQGVDLALAVPFDEDFAARDKAAFLDDLV--RLEARRLVVGEDFAFGRGRSGGPA 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+               L +     V S+ IR  L +G V  A HLLG  +     V  
Sbjct: 131 DLKT------VAPTLTVPLLDLGGAPVKSTRIRELLEQGDVEAARHLLGRPYGARGIVRQ 184

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           GE++GR LGFPTAN++ +P  +L  GV+A R    ++ +Y  V N G  PT+  +G L L
Sbjct: 185 GERLGRRLGFPTANVETAPGKVLPRGVFAARTWVAER-AYPAVVNVGTRPTVRGSG-LRL 242

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ +  FS E+YG    + F   LR E  F+D+E L+  +  D + AR+
Sbjct: 243 EAHLIGFSGELYGHELRLVFLKKLRDERAFEDLEALRSQIARDLEAARR 291


>gi|213964537|ref|ZP_03392737.1| riboflavin biosynthesis protein RibF [Corynebacterium amycolatum
           SK46]
 gi|213952730|gb|EEB64112.1| riboflavin biosynthesis protein RibF [Corynebacterium amycolatum
           SK46]
          Length = 331

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 24/333 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +++ ++   + P  L   VV IG FDGIHLGH  ++  A+  A    +   +++F+P+
Sbjct: 1   MEIWYGLD---NAPEDLGDTVVTIGVFDGIHLGHKRLIAAAVSDARARGVKSLLMTFDPN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         LS  S + ++ E  G   ++   F    ++  AE F++ V+ + L  
Sbjct: 58  PVALFAPDKVPPALSTVSRRAELAEAEGIDVMLVVPFDKTFSSIPAEDFVRTVVRDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           + V  G  F +G+  +G    L + G K G     +D L     + ++ VSS+ IR  L 
Sbjct: 118 QAVFVGQNFTYGQKASGTAETLPEHGRKCGVDVTIVDLLDVTAADSTERVSSTRIRGLLA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQ 233
            G V  AA  LGY   ++ DVI G+ + G  LGFPTAN+  +  + +  +GVYA  F  Q
Sbjct: 178 DGAVSAAASCLGYFHRVDGDVIPGQGRGGAQLGFPTANIDFAEGLAIPADGVYAAWFTAQ 237

Query: 234 DQTSY-----SGVANFG-RNPTMVPNGPLL--------LESFIFDFSQEIYGQRCTVSFF 279
              +       G   FG R P  V  G  +        +E+++ D   ++YG    V F 
Sbjct: 238 PTAARPEPDPKGDIEFGVRYPAAVSVGTNVTFGDTDRTVEAYVIDRHADLYGTAGQVEFV 297

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           D +R   KF  +E+L   M +D      IL  +
Sbjct: 298 DRIRGMEKFDSVEELIDRMNQDVADTEAILAKA 330


>gi|312876946|ref|ZP_07736921.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796261|gb|EFR12615.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 305

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 11/302 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     A+     V +F  HP 
Sbjct: 1   MNVYEIVEKRHDSP------AVALGFFDGFHIGHKKLFEILNANASGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +     +   ++       G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTKYILTNEERLE--FFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY       D+  Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVYVTNTIIDDK-RYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG++  + F D++R E KF +I +LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDLYGKQVKIEFIDFVREEKKFSNINELKNQIA 290

Query: 300 ED 301
           +D
Sbjct: 291 QD 292


>gi|322387776|ref|ZP_08061385.1| riboflavin biosynthesis protein RibF [Streptococcus infantis ATCC
           700779]
 gi|321141643|gb|EFX37139.1| riboflavin biosynthesis protein RibF [Streptococcus infantis ATCC
           700779]
          Length = 305

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 13/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDGIHLGH  +   A +IA    ++V  ++F+  P+  ++  SP  +  +    
Sbjct: 22  VLVLGYFDGIHLGHQKLFSIAGEIAAKKRLSVALITFHESPKLTLKPYSPENLLHILNAE 81

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+  ++ G   L    F+   AN +A++F+    V+ ++  T++ G  +  G DR   
Sbjct: 82  ERERKFKRAGVENLYLMDFSSRIANMTAQEFVD-TFVKEVKADTIVVGFDYSLGSDRKSA 140

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +     E +    V +  + + K +I SS+ IR A+ +G+V  A  LLG        V
Sbjct: 141 EDL----KEIFDGEVVVVPPVEDEKGKI-SSTRIRQAILEGNVKEAGQLLGSPLPTRGIV 195

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    + +  Y G+A+ G+N T      
Sbjct: 196 VHGNARGRTIGYPTANLVLLDRTYMPADGVYTVDIEIK-RKLYRGMASVGKNVTF-DGEE 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              E  IFDF ++IYG+  TV + D +R  +KF  IE+L   + EDEK ARK
Sbjct: 254 ERFEVNIFDFDEDIYGETVTVYWLDRIRDMVKFDGIEQLVKQLEEDEKAARK 305


>gi|313885293|ref|ZP_07819044.1| riboflavin biosynthesis protein RibF [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619399|gb|EFR30837.1| riboflavin biosynthesis protein RibF [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 329

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 21  VVAIGNFDGIHLGH-HLI-LEQAIKIANNSPITVLSFNPHPRTIIQS--SSPIFTLSPPS 76
           V+A+G FDG+HLGH H+I + QA   A + P+ V++F+  P+       +S +  +S   
Sbjct: 21  VLALGFFDGVHLGHQHVIKVAQAYAQAQDLPLAVMTFDQQPKIFYSELKASEVEYVSSNQ 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  ++G   L    ++ E  + S + F+   +V  L  K V+ G  + +G     +
Sbjct: 81  RRTELFAELGVDYLYMVHYSHEFGSQSPQAFVDDYMV-GLHAKIVVAGFDYTYGPSHLAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L     K  F  V + EL+  ++  V S  I   L +G +  A   LGY +     V
Sbjct: 140 MQTLPMHA-KGRFKVVEVPELQV-QTHKVGSRFILDYLKEGQLDQANLELGYIYQTHGKV 197

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHGEK GRT+GFPTAN+Q     ++ K GVY +  + ++   +  +A+ G N T   +  
Sbjct: 198 IHGEKRGRTIGFPTANIQHFGQQVIPKIGVYVVAIKVEN-IWHRAMASIGYNVTFPGDRG 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           L +E +I DF+Q+IYGQ   + ++ YLR EIKF   + L   + +D +
Sbjct: 257 LSIEVYILDFAQDIYGQEVDIRWYHYLRGEIKFDSAQGLIDQLNQDRE 304


>gi|289167995|ref|YP_003446264.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mitis B6]
 gi|288907562|emb|CBJ22399.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mitis B6]
          Length = 305

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAAMKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +AE+F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSKFASLTAEEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGELLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+ AR
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVAR 302


>gi|196019411|ref|XP_002118972.1| hypothetical protein TRIADDRAFT_62949 [Trichoplax adhaerens]
 gi|190577479|gb|EDV18542.1| hypothetical protein TRIADDRAFT_62949 [Trichoplax adhaerens]
          Length = 214

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 4/207 (1%)

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           F++K+L++  +VK V+TG  F FGK+R G+   L +    YGF    ID+ + +  + VS
Sbjct: 6   FVEKILIKKFDVKGVVTGYNFHFGKNRLGNANFLSESSNNYGFFYEVIDKYKKDFIE-VS 64

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGV 225
           SS +R  + KG V     +LG  + I   V +G+K+   LG+ TAN++L  D++    GV
Sbjct: 65  SSKLRELIAKGMVETVRKILGIYYFISGVVCYGKKLAGKLGYKTANIKLIKDLVYPLNGV 124

Query: 226 YAIRFRTQDQ--TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           Y +R   +D+   SY GVAN G  PT   N   +LE  IF+F Q+IY +   V F  +LR
Sbjct: 125 YLVRVTVKDEKDNSYYGVANIGVKPTFSQNQERMLEVHIFEFGQDIYEKDIKVEFISFLR 184

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILE 310
           PE +F  +E+L+  +  D   A+ +L+
Sbjct: 185 PERQFSIVEELQSQIKRDINFAKYLLK 211


>gi|227878813|ref|ZP_03996720.1| FAD synthetase [Lactobacillus crispatus JV-V01]
 gi|256843335|ref|ZP_05548823.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           125-2-CHN]
 gi|256849846|ref|ZP_05555277.1| riboflavin kinase [Lactobacillus crispatus MV-1A-US]
 gi|262046908|ref|ZP_06019868.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           MV-3A-US]
 gi|293381220|ref|ZP_06627228.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           214-1]
 gi|312978237|ref|ZP_07789981.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           CTV-05]
 gi|227861561|gb|EEJ69173.1| FAD synthetase [Lactobacillus crispatus JV-V01]
 gi|256614755|gb|EEU19956.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           125-2-CHN]
 gi|256713335|gb|EEU28325.1| riboflavin kinase [Lactobacillus crispatus MV-1A-US]
 gi|260572890|gb|EEX29450.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           MV-3A-US]
 gi|290922260|gb|EFD99254.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           214-1]
 gi|310894955|gb|EFQ44025.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           CTV-05]
          Length = 316

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ QA +IA    ++  VL+F+ HP+ + +S      L     +
Sbjct: 25  VLALGFFDGVHLGHQRLINQAKEIALQKKLSLVVLTFDRHPKEVYESKRDFKYLETLEEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT   +  SA++F+  V+V  L   TV+ G  + +G     +  
Sbjct: 85  ANKMAELGVDYLAVLPFTKNFSQISAQEFVDNVIVR-LNADTVVAGFDYTYGSKNIANMA 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +   K  F+ V + +   N  +I  S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 144 NLPQFS-KGRFNIVVMPKQTFNGRKI-GSTEIRQAIKDGQMKLATELMGHHYVMSGIIGH 201

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LG+PTAN+  +   ++ K GVYA + +   +  Y+ + + G N T+  +  + 
Sbjct: 202 GKRNGHKLGYPTANLIWAEHKVIPKIGVYATKTKVNGKW-YNSMTSVGYNVTINQDKKIY 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +ES IFDF++++YG+   + ++ Y R E KF  + +LK  +  DE++ R
Sbjct: 261 IESNIFDFNEDVYGKPMKIKWYKYTRGEKKFAGLPELKEQLERDEQEIR 309


>gi|125717775|ref|YP_001034908.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus sanguinis SK36]
 gi|125497692|gb|ABN44358.1| FAD synthase, putative [Streptococcus sanguinis SK36]
          Length = 310

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 146/305 (47%), Gaps = 17/305 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P   L   S +E++  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             + FG DR       ++  E   F    + I    N  ++ +SS+ IR  +  G +L  
Sbjct: 127 FDYHFGSDR-------KESHELRDFFNGKIVIVPSVNLDNRKISSTRIRETIAAGDMLKT 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGV 241
             LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY        Q  Y G+
Sbjct: 180 QELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ-RYRGM 238

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF+ I+ L   +  D
Sbjct: 239 ASVGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFEGIDSLVAQLQSD 297

Query: 302 EKKAR 306
           E+ AR
Sbjct: 298 ERIAR 302


>gi|324990879|gb|EGC22814.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK353]
          Length = 310

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLLAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSDEQ 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|312127891|ref|YP_003992765.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777910|gb|ADQ07396.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 300

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 150/302 (49%), Gaps = 11/302 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     +      V +F  HP 
Sbjct: 1   MNVYEIVEKRHDSP------AVALGFFDGFHIGHKRLFEVLDANSRGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +     +   ++       G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTKYILTNEERLE--FFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  +VSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHVVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + ++ ++GVY       D+  Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKVVPRKGVYVTNTIIDDK-RYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIA 290

Query: 300 ED 301
           +D
Sbjct: 291 QD 292


>gi|327469560|gb|EGF15029.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK330]
          Length = 310

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + +   +R  +KF+ I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFEGIDSLVAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|327392672|dbj|BAK10094.1| riboflavin biosynthesis protein ribF [Pantoea ananatis AJ13355]
          Length = 255

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  ++ + ++     N P+ V+ F P P  +    S    L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALMGRLLEEGRKRNLPVMVMVFEPQPLELFAGESAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K L ++G  +++  +F    A  SA+ FI ++LV  L V  +  G  FRFG  R GD
Sbjct: 76  EKLKYLAEIGVDSVLCVRFDHRFAALSAQSFISELLVNKLGVNYLAVGDDFRFGAGRQGD 135

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQK G +YGF  V  +   +   +I SS+ +R AL + ++  A  LLG+ F+I   V
Sbjct: 136 FLLLQKAGAQYGFDVVSTETFCDGGKRI-SSTAVRQALAEDNLALAQSLLGHPFSISGRV 194

Query: 197 IHGEKIGRTLGFPTANMQL 215
           +HG+ +GRTLGFPTAN+ L
Sbjct: 195 VHGDALGRTLGFPTANLPL 213


>gi|213584763|ref|ZP_03366589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 215

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 2/208 (0%)

Query: 100 ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN 159
           A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF          
Sbjct: 2   AALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE 61

Query: 160 NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI 219
              +I SS+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +
Sbjct: 62  GGVRI-SSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQV 120

Query: 220 LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
              +GVYA+           GVAN G  PT V      LE  + D   ++YG+   V   
Sbjct: 121 SPVKGVYAVEVTGLGDKPLPGVANIGTRPT-VAGVRQQLEVHLLDVVMDLYGRHIDVILR 179

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             +R E +F  +++LK  +  DE  ARK
Sbjct: 180 KKIRNEQRFASLDELKAQIARDELTARK 207


>gi|221195800|ref|ZP_03568853.1| riboflavin biosynthesis protein RibF [Atopobium rimae ATCC 49626]
 gi|221184274|gb|EEE16668.1| riboflavin biosynthesis protein RibF [Atopobium rimae ATCC 49626]
          Length = 347

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 9/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDG+H GH  ++ +A   A     P+  ++F+P P  ++ S SP   L   + +
Sbjct: 43  VCAIGVFDGLHEGHKALIAEARADAQRREVPLVAVTFDPDPAEVVCSRSPRRLLQDET-R 101

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L      A++ + FT E A  S  ++++K L+ ++    +  G+ F FG    G   
Sbjct: 102 IRALTTCSVDAILVHAFTPEFAGLSVCEYVEKALLPYIHPVAIHVGSDFGFGARGEGRAR 161

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L   G K+GF  V   +L       +SS+ IR  +    +  AA LLG    +   V+H
Sbjct: 162 DLATLGTKHGFE-VIAHQLIEKDGSAISSTRIRNLIEAARIDEAAALLGRPHFLSGTVMH 220

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRF----RTQDQTSYSGVANFGRNPTMVPN 253
           G   G + GFPTAN+ LSP D +  +GVYA       +   +  +    N G   +    
Sbjct: 221 GRGQGASFGFPTANISLSPKDCMPADGVYACYIVDTQKPGGEEIWPAAVNVGVPRSFEVK 280

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              LLE+ +  F   +YG      F +YLRP I F+ +E+L   + ++ +  R  L+S
Sbjct: 281 KTPLLEANLLGFKGNLYGHTLNCVFMNYLRPPIVFQSVEELSTTVLKNIEWVRTHLDS 338


>gi|2500204|sp|Q59263|RIBF_CORAM RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|296863357|pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From
           Corynebacterium Ammoniagenes
 gi|296863358|pdb|2X0K|B Chain B, Crystal Structure Of Modular Fad Synthetase From
           Corynebacterium Ammoniagenes
 gi|840671|dbj|BAA07182.1| FAD synthetase [Corynebacterium ammoniagenes]
          Length = 338

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 26/317 (8%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
           ++P  L    V IG FDG+H GH  ++   ++ A    +   +++F+PHP ++       
Sbjct: 9   AVPKDLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++  + +  + E  G   ++   FT E +  S E++++ +L + L    V+ G  F F
Sbjct: 69  LGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTF 128

Query: 130 GKDRAGD----RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           G++ AG     R I Q R       TV + +L +++   +SS+ +R  L++G V  A   
Sbjct: 129 GENAAGTADSLRQICQSR------LTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWA 182

Query: 186 LGYRFTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYA-----------IRFRT 232
           LG  F +   V+ G  + G+ LGFPTAN      + L  +GVYA           +    
Sbjct: 183 LGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNM 242

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           + + +Y+   + G NPT   +    +ESF+ D   ++YG    V F D++R   KF  +E
Sbjct: 243 EPEVAYAAAISVGTNPTF-GDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVE 301

Query: 293 KLKIYMGEDEKKARKIL 309
           +L   M +D +K R +L
Sbjct: 302 QLLEVMAKDVQKTRTLL 318


>gi|323351789|ref|ZP_08087443.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           VMC66]
 gi|322122275|gb|EFX94001.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           VMC66]
          Length = 310

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 142/303 (46%), Gaps = 13/303 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I VL+F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPESPKLAFVRY 67

Query: 67  SP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEDRMAQLENLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             + FG DR     +       Y    + I    N  ++ +SS+ IR  +  G +L    
Sbjct: 127 FDYHFGSDRKESHEL-----RDYFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKTQE 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q  Y G+A+
Sbjct: 182 LLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ-RYRGMAS 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G+N T      L  E  IFDFSQ+IYG    + +   +R  +KF  I+ L   +  DE+
Sbjct: 241 VGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFDGIDSLIAQLQSDER 299

Query: 304 KAR 306
            AR
Sbjct: 300 IAR 302


>gi|307709228|ref|ZP_07645687.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK564]
 gi|307620174|gb|EFN99291.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK564]
          Length = 305

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +AE+F     ++ +  K ++ G  + FG D    
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAEEFFA-TYIKAMNAKIIVAGFDYTFGSDTK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAEELLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+ AR
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVAR 302


>gi|299143059|ref|ZP_07036178.1| riboflavin biosynthesis protein RibF [Prevotella oris C735]
 gi|298575474|gb|EFI47361.1| riboflavin biosynthesis protein RibF [Prevotella oris C735]
          Length = 313

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 21/309 (6%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTL 72
           N +   V  IG FDG+H GH  +++  I  A    +  TV++F+ HPR ++ S      L
Sbjct: 11  NAIAPCVATIGFFDGVHRGHQYLIKHVIDKAKACGLASTVITFDRHPRQVLHSDYVPQLL 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  +L K G        F   TA  SA  F+++VL + L VK +I G   RFG +
Sbjct: 71  TTLENKLLLLSKTGIDNAAVLPFDEATARLSAFDFMRQVLHDRLNVKQLIIGYDNRFGHN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-----VSSSNIRTALTKGHVLNAAHLLG 187
           R  D     + G + G       E+ +N++ +     VSSS IR+ L  G +  A   LG
Sbjct: 131 REEDFEDYVRYGNELGI------EVIHNQAYVLNGVNVSSSVIRSFLQAGEIEMATLCLG 184

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ-TSYSGVANF 244
           Y +T+   V+HG   GR +GFPTAN+    S  ++   GVYA++ + ++  T   G+ N 
Sbjct: 185 YSYTLVGKVVHGFAQGRKMGFPTANIDTTESGQLVPAPGVYAVKVKIENTVTLLHGMMNI 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT      L LE  IF+F  ++YG++  V F   +R E KF +     + + E  +K
Sbjct: 245 GMRPTF-DGSKLTLEVNIFNFQGDLYGKQLQVVFIHRIREERKFTN----ALGLAEQLQK 299

Query: 305 ARKILESSY 313
            R  +E  +
Sbjct: 300 DRLQIEEQF 308


>gi|229820972|ref|YP_002882498.1| riboflavin biosynthesis protein RibF [Beutenbergia cavernae DSM
           12333]
 gi|229566885|gb|ACQ80736.1| riboflavin biosynthesis protein RibF [Beutenbergia cavernae DSM
           12333]
          Length = 333

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 155/323 (47%), Gaps = 15/323 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V+H +     +P+ +   VV IGNFDG+H GH  +L   +  A  N +    ++F+PH
Sbjct: 1   MQVWHGL---GQVPSDVTTSVVTIGNFDGVHRGHRGVLAHVVARARENGALAVAMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L+    +  +L + G  A++   +T + A    E F+++ LV+ L  
Sbjct: 58  PARVHRPQDAPEELTGLEDKLALLAETGLDAVLVVHYTADFAGQDPEHFVRRYLVDALHP 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKG 177
             V+ G   RFG    GDRG +   G   GF    ++++  + S+   SS+  R  L  G
Sbjct: 118 VVVVIGRDVRFGAGNTGDRGTMAALGGALGFDVDVVEDVVPDASERRWSSTWARELLAAG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYA---IRFRTQ 233
            V   A +LG    +   V+HGE  GR LGFPTAN+   +   +  +GVYA   +R   +
Sbjct: 178 DVAGLALVLGRLHRMRGAVVHGEARGRALGFPTANLDPAASGAVPADGVYAGWLLRDGGR 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLL-LESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDI 291
                + + + G NPT   +G +  +E+ +   +  ++YG+   V F   LRP ++F  +
Sbjct: 238 GDRLPAAI-SVGTNPTF--DGLVRQVEAHVLGRTDLDLYGEEVVVEFAVRLRPTLRFDGV 294

Query: 292 EKLKIYMGEDEKKARKILESSYP 314
           + L   M ED   A + L    P
Sbjct: 295 DPLVEQMREDVADAARALGVPAP 317


>gi|295693131|ref|YP_003601741.1| riboflavin kinase / fmn adenylyltransferase [Lactobacillus
           crispatus ST1]
 gi|295031237|emb|CBL50716.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           crispatus ST1]
          Length = 316

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ QA +IA    ++  VL+F+ HP+ + +S      L     +
Sbjct: 25  VLALGFFDGVHLGHQRLINQAKEIALQKKLSLVVLTFDRHPKEVYESKRDFKYLETLEEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT   +  SA++F+  V+V  L   TV+ G  + +G     +  
Sbjct: 85  ANKMAELGVDYLAVLPFTKNFSQISAQEFVDNVIVR-LNADTVVAGFDYTYGPKNIANMA 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +   K  F+ V + +   N  +I  S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 144 NLPQFS-KGRFNIVVMPKQTFNGRKI-GSTEIRQAIKDGQMELATELMGHHYVMSGIIGH 201

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LG+PTAN+  +   ++ K GVYA + +   +  Y+ + + G N T+  +  + 
Sbjct: 202 GKRNGHKLGYPTANLIWAEHKVIPKIGVYATKTKVNGKW-YNSMTSVGYNVTINQDKKIY 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +ES IFDF++++YG+   + ++ Y R E KF  + +LK  +  DE++ R
Sbjct: 261 IESNIFDFNEDVYGKPMKIKWYKYTRGEKKFAGLPELKEQLERDEQEIR 309


>gi|218133597|ref|ZP_03462401.1| hypothetical protein BACPEC_01466 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990972|gb|EEC56978.1| hypothetical protein BACPEC_01466 [Bacteroides pectinophilus ATCC
           43243]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 6/292 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV +G FDG+H GH  +L      A+   +     +F+  P ++ ++    + ++    +
Sbjct: 17  VVTLGKFDGVHKGHQKLLATVRDKASGYGAMSAAFTFDHIPVSLSKTPGQSYIMTNAE-R 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              +E +G   L+ Y FT E  N   E F++ ++ + L+   V+ G  + FGK   G+  
Sbjct: 76  RSFIESLGIDILVEYPFTSEFMNTEPEVFVEDIIRKSLKAVCVVVGPDYTFGKGGRGNVQ 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L    ++ GF  V + +    + +I SS+ +R  L  GH+     LL   +++   +  
Sbjct: 136 MLADMADEAGFELVVVPKECYEEREI-SSTFVREELQVGHMETVNMLLARPYSVNGVIAK 194

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G +IGRT+  PT N+      LL   GVYA         S+ GV N G  PT+  N  + 
Sbjct: 195 GSQIGRTMNLPTINIYPPAGKLLPPNGVYA-SVTILGGKSFYGVTNVGIKPTVKDNAEIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E+F+FDF +++YG    V    + RPE+KF +IE L   +  D + AR++ 
Sbjct: 254 VETFLFDFDEDVYGVNVEVQLRHFQRPEMKFDNIEALHKQIDADAQFARQLF 305


>gi|312134902|ref|YP_004002240.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           owensensis OL]
 gi|311774953|gb|ADQ04440.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           owensensis OL]
          Length = 305

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 143/281 (50%), Gaps = 5/281 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG H+GH  + E     A      V +F  HP  ++   +     +   ++   
Sbjct: 16  VALGFFDGFHIGHKKLFEVLDANARGRKKVVFTFKNHPDNLLGFDTKHILTNEERLE--F 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
               G   +   +F  +      ++FI+++L++ L V  V+ G  F FG    GD   L 
Sbjct: 74  FRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSVVVVGYDFTFGYMAEGDSKYLC 133

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           ++  ++G   + ID +   +  +VSS+ IR  + +G++  A  +LG+ F I   V  G +
Sbjct: 134 EKLHQFGRKCIVIDPVMY-QEHVVSSTLIRRLILEGNIKLANCMLGFNFFINGTVKRGNR 192

Query: 202 IGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +G+ +GFPT N++   + ++ K+GVY I     D   Y  + N G NPT+  +  + +E+
Sbjct: 193 LGKKMGFPTINIKFDKEKVVPKKGVY-ITNTIIDDKRYLSITNVGTNPTVSASENIKIET 251

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            +    +++YG+R  + F D++R E KF +I++LK  + +D
Sbjct: 252 HVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQITQD 292


>gi|251773215|gb|EES53767.1| Riboflavin kinase / FAD synthase (RibC) [Leptospirillum
           ferrodiazotrophum]
          Length = 321

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 16/297 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGNFDG+H GH  +L Q    A +   P  +L+F+PHP  ++   S    +     Q
Sbjct: 21  AMTIGNFDGVHAGHQYLLSQLFDRARSLSCPSLLLTFDPHPLFVLAPDSSFRMIMSRERQ 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E++L ++G   L+   F    A  +A+ F+  VL        ++ G +FRFG  R G   
Sbjct: 81  EEVLGELGLEILVSLAFDKALAAMAAKDFVSDVLRPLFHPALILVGEEFRFGAGRLGTLD 140

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L       G   + +        +I SSS IR A+ +G +  A  LL     I   V+ 
Sbjct: 141 TLSHELSSEGTQVIPLSPFMEEGHRI-SSSRIRKAVDQGEIEQANRLLTRPLEISGPVVR 199

Query: 199 GEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQ----DQTSYSGVANFGRNPTMVP 252
           GE+ GR LGFPT N+ + PD  ++   GVYA R R +    D  +Y      G  PT   
Sbjct: 200 GEQRGRLLGFPTLNL-IPPDHRLVPPPGVYATRTRVEGVLHDSATY-----IGTKPTFGT 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + P ++E+ +  FS ++YG    V F+  +R E  F +++ LK  +  D   + + L
Sbjct: 254 HRP-VIETHLPGFSGDLYGVDHEVFFYHRVRGERSFPNVDALKAQIASDIDSSLRYL 309


>gi|312793242|ref|YP_004026165.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180382|gb|ADQ40552.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 305

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 11/302 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     A+     V +F  HP 
Sbjct: 1   MNVYEIVEKRYDSP------AVALGFFDGFHIGHKKLFEVLNANASGIKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +     +   ++       G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTKYILTNEERLE--FFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY       D+  Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVYVTNTIIDDK-RYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG++  + F D++R E KF +I +LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDLYGKQVKIEFIDFVREEKKFSNINELKNQIA 290

Query: 300 ED 301
           +D
Sbjct: 291 QD 292


>gi|71066316|ref|YP_265043.1| riboflavin kinase / FMN adenylyltransferase [Psychrobacter arcticus
           273-4]
 gi|71039301|gb|AAZ19609.1| riboflavin kinase / FMN adenylyltransferase [Psychrobacter arcticus
           273-4]
          Length = 347

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 141/311 (45%), Gaps = 34/311 (10%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P  L   V+ IGNFDG+HLGH  +L Q  ++A    +   V+ F P PR     ++    
Sbjct: 22  PVALAPCVLTIGNFDGVHLGHQAMLAQVRELAKARKLNSAVMIFEPQPREFFAPAAAPAR 81

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + ++ +L + G   LI   F  E  + SA+ F   +L   L V+ ++ G  F+FG 
Sbjct: 82  LTNLAEKQALLAEYGVETLIVAGFDNEFRSLSAQAFAD-ILARRLNVQALVLGDDFKFGH 140

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           DR GD   L+     YG H   +  + ++  K+  +SS+ IR  L  G +  A  LLG  
Sbjct: 141 DRTGDSQFLRD----YGLHVTNLHTVNDDSHKAARISSTRIRDLLLAGDINAANALLGRD 196

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT------------- 236
           + I   V+ G+KIGRT+ FPTAN+ L        G++A+   + DQ              
Sbjct: 197 YAITGTVVGGDKIGRTMDFPTANIDLERMKPALHGIFAVDVVSLDQDGNVIPDGLYKRAD 256

Query: 237 ------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                       S  G AN G  P++       LE    +   ++YG    V F  YL  
Sbjct: 257 NNHKGITGLRAHSLFGTANIGTRPSVDKTHEWRLEVHFPELQADLYGSTLQVRFLHYLHG 316

Query: 285 EIKFKDIEKLK 295
           E  ++ ++ LK
Sbjct: 317 ERHYESLDALK 327


>gi|320449779|ref|YP_004201875.1| riboflavin biosynthesis protein RibF [Thermus scotoductus SA-01]
 gi|320149948|gb|ADW21326.1| riboflavin biosynthesis protein RibF [Thermus scotoductus SA-01]
          Length = 294

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 145/294 (49%), Gaps = 27/294 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L QA+  A +   P+ V +F+P  +   +    +  L+     
Sbjct: 15  VVAVGSFDGVHLGHQHLLHQALAEAKSLHQPLLVYTFDPPTKVFTRGEGFLMDLT----- 69

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+  L  +G   ++   F         E F Q+   E+LE    +  ++   G+D    
Sbjct: 70  EKVEALRALGVELILAVAFN--------ETFAQREAGEFLEDLRRLGASRIYVGEDFRFG 121

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           +G      +      V I  L     + V SS IR  L +G V  A HLLG  +     V
Sbjct: 122 KGRGGGPEDLAQVAPVRIVPLLTLGGEPVKSSRIRALLQEGRVEEARHLLGRPYGAYGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS---YSGVANFGRNPTMVPN 253
           + G+K+GR LGFPTAN+ + P  +L  GV+A+    + Q S   Y GVAN G  PT+  N
Sbjct: 182 VEGDKLGRKLGFPTANLAVHPQKILPPGVFAV----EAQGSFGRYKGVANVGTRPTV--N 235

Query: 254 G-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           G    LE  +  F+ E+YG+   +SF   LR E +F  +E+LK  + +D   AR
Sbjct: 236 GMERRLEVHLLGFAGELYGEEMRLSFLKRLREEKRFDSLEELKAQIAKDVASAR 289


>gi|150020335|ref|YP_001305689.1| riboflavin biosynthesis protein RibF [Thermosipho melanesiensis
           BI429]
 gi|149792856|gb|ABR30304.1| riboflavin biosynthesis protein RibF [Thermosipho melanesiensis
           BI429]
          Length = 292

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 34/306 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV +G FDG+H+GH  IL +  ++A         FN        S+S I+T+  P    K
Sbjct: 6   VVTVGVFDGVHIGHVEILSRLKRLAE-------EFN--------STSEIYTIVFPMEYYK 50

Query: 81  ---------ILEKMGFSALIRYKFTLE---TANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
                    + +++    +    F LE     +  A +F + +     + K ++ G  FR
Sbjct: 51  GHFDGLLIPLEDRITLLEVYGEVFPLELNEIKDIDASKFFEII---SKDTKGIVVGKDFR 107

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+  GD  +L+K  +K       +++L  N  + VSS+ IR  + +G++  A  LLG 
Sbjct: 108 FGKNAKGDISLLEKLCKKKNIKLEVVNDLTENGKR-VSSTLIRKLIKEGNIKLANKLLGR 166

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            + +   V   +++GR LGFPTAN++   ++++ K GVY  +  T     Y G+ N G  
Sbjct: 167 AYPVYGKVYKDKQLGRKLGFPTANIRRHKELVIPKFGVYLSKVYTP--KLYFGLVNIGLR 224

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+     +  E +IFDF++ IYG+   V   ++LR E KFK+I  L   M EDEK A+K
Sbjct: 225 PTVEKTKNVKYEVYIFDFNENIYGKEIRVELLEFLRAEEKFKNINDLINRMKEDEKLAKK 284

Query: 308 ILESSY 313
           ILE  Y
Sbjct: 285 ILEEKY 290


>gi|116627788|ref|YP_820407.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus LMD-9]
 gi|116101065|gb|ABJ66211.1| FMN adenylyltransferase / riboflavin kinase [Streptococcus
           thermophilus LMD-9]
 gi|312278348|gb|ADQ63005.1| FMN adenylyltransferase / riboflavin kinase [Streptococcus
           thermophilus ND03]
          Length = 306

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 152/293 (51%), Gaps = 13/293 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA+     + VL+FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + +  G   L    F  + A  S++ FI +  +  L+ + ++ G  ++FG  R
Sbjct: 76  APQRRCDLFKAYGTDQLYLTDFNSDFARTSSDDFITR-YINRLKAQEIVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +        TV + E + +  + +SS+ +R  + +G+V  A +LLG+ F+  
Sbjct: 135 T-DTDYLDRNFSG----TVHVIEEQQSGGEKISSTRVRQLIREGNVKEANNLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +   IL  +GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTILPADGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
              L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   +  D+K A
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLDYIRDIIKFNNIDELCDQLKADKKIA 300


>gi|323466343|gb|ADX70030.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           helveticus H10]
          Length = 320

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 147/285 (51%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G FDG+HLGH  ++ +A +IA+    P+ VL+F+ HP+ I         L     +
Sbjct: 25  ILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLDEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT + +    + F+  V+++ L   TV+ G  + +G     +  
Sbjct: 85  ADKMAELGVDYLAVMPFTKKFSEIDTQSFVDNVIIK-LNADTVVAGFDYTYGPKETANMK 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L K  +      V   ++ N K   + S+ IR A+ +G +  A  L+G+ + +   V H
Sbjct: 144 NLPKFAKGRFEIVVMPKQIFNGKK--IGSTEIRQAIREGKMDLAFQLMGHHYVMSGTVGH 201

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+   S  ++ K GVYA + +   +  Y  + + G N T+     + 
Sbjct: 202 GKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNGKW-YESMTSVGYNVTIGQPEKIF 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES IFDF ++IY Q   + ++ Y R EIKF  +++LK  + +D+
Sbjct: 261 IESHIFDFKEDIYDQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQ 305


>gi|291302564|ref|YP_003513842.1| riboflavin biosynthesis protein RibF [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571784|gb|ADD44749.1| riboflavin biosynthesis protein RibF [Stackebrandtia nassauensis
           DSM 44728]
          Length = 314

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 7/304 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
            + P      VV IG FDG+H GH  ++ +A+  A  + ++  V++F+PHP  +++  + 
Sbjct: 11  DATPGSWGRSVVTIGVFDGVHRGHQHVIGRAVATAREAGVSSVVVTFDPHPSEVVRPGTH 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    +  ++ ++G   L    FT E +  S   F + +L   L  + V+ G  FR
Sbjct: 71  PAVLTELDRRGDLIAELGADGLCVLPFTRELSQLSPRDFARDMLAGGLGAQHVVVGENFR 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   AGD G L + G ++GF TV   +     + + SS+ +R+ LT G V  AA  LG 
Sbjct: 131 FGHKAAGDTGTLAELGTEFGF-TVEAVKPVGESATVFSSTFVRSRLTDGDVEAAAEALGR 189

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVA-NFG 245
              +   V+ G   G T LGFPTAN++ +    +  + VYA              A + G
Sbjct: 190 PHRLSGMVVRGANRGGTQLGFPTANLRHAEHAAIPADAVYAGWLTWAGSPEPLAAAISVG 249

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT    G   +E+ I DF  +IYG+  ++ F   LR +  +  +  L   +  D    
Sbjct: 250 TNPTFHGTG-RTVEAHILDFDTDIYGEPVSLDFVARLREQRTYDALPALIAQIDADVIDT 308

Query: 306 RKIL 309
           RK+L
Sbjct: 309 RKVL 312


>gi|225848001|ref|YP_002728164.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643618|gb|ACN98668.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 311

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 16/298 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  +GNFDG+HLGH  I+++   IA    +   V++F+PHPR I+      +  S  +++
Sbjct: 17  VCTVGNFDGLHLGHKEIIKKVKDIAKKENLKSLVITFHPHPRKILNPKK--YKCSIVNLE 74

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            KI   +K     L+  +F  +    SA +F+   L   L+ K +I G  ++FG  + GD
Sbjct: 75  TKIYLFKKENIDYLLIVEFNKDFYQKSAFEFLN-FLKNALKCKVLIVGKDWKFGFKQEGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +K G   G   + I+++++N S+I SS      L+KG +     LLG R+ +   V
Sbjct: 134 IQYAKKVGSSIGIKVIPIEDIKSNSSRISSSLIRE-LLSKGELKKVEKLLGRRYFLIEKV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + G+  GR +GFPT N++   D+ LK+GVY + +  +D+  Y  V N+G  PT+      
Sbjct: 193 VKGDGKGREIGFPTINLKPDDDLCLKKGVY-VGYLEKDEKVYKAVINYGNRPTLDGKKTF 251

Query: 257 ----LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               L+E  +   ++E Y     V F +YLR E KF+ +E LK  +  D +KA+++LE
Sbjct: 252 IEVHLIEDKVDLKTEEDY---VKVYFIEYLREEKKFESVEDLKNQIKLDIQKAKEVLE 306


>gi|281357725|ref|ZP_06244211.1| riboflavin biosynthesis protein RibF [Victivallis vadensis ATCC
           BAA-548]
 gi|281315672|gb|EFA99699.1| riboflavin biosynthesis protein RibF [Victivallis vadensis ATCC
           BAA-548]
          Length = 325

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 9/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IG FDG+HLGH  I+ + ++ A  N +    ++F+PHPR ++  +     L P S +
Sbjct: 23  ALGIGVFDGVHLGHRRIISELVRQAKRNGAVPAAMTFDPHPRAVLHPTEAPTLLVPLSER 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDR 137
            ++L + G   ++  +FT E A    E+F++++L      +  +  G ++RFG+   GD 
Sbjct: 83  IRLLREAGAELVLVVRFTAEFARLEPEEFLRRLLECPEFRLAGICVGERWRFGRGGCGDS 142

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG--YRFTIESD 195
            +L++     G       EL     + VSSS IR A+  G +  AA +LG  YR T   +
Sbjct: 143 ALLREYARSRGLDFTACPELEIG-GETVSSSVIRRAIAAGRLDTAAEMLGRPYRLTGVVE 201

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM-VPNG 254
             +G    R L  PTAN+     +L  +GVYA     +D   Y    N G  PT      
Sbjct: 202 YGYGAATSR-LSCPTANLDFKAGVLPPDGVYA-GCAVRDGRLYPAAINVGLCPTFGWEQA 259

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E  + D++  +YG    V F  +LR E  F   E+LK+ +  D  + R+
Sbjct: 260 RRRVEIHLLDYTGNLYGSELGVEFLHHLREERTFTGPEELKLQIDRDLVRIRE 312


>gi|322375349|ref|ZP_08049862.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C300]
 gi|321279612|gb|EFX56652.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C300]
          Length = 308

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + AN + ++F     +  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFANLTGQEFFD-TYIRALKPAIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                   + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 137 --TADDLKDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVKEVKHLLGTPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIAR 302


>gi|324995562|gb|EGC27474.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK678]
 gi|325687886|gb|EGD29906.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK72]
          Length = 310

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 145/305 (47%), Gaps = 17/305 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P   L   S +E++  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             + FG DR       ++  E   F    + I    N  ++ +SS+ IR  +  G +L  
Sbjct: 127 FDYHFGSDR-------KESHELRDFFNGKIVIVPSVNLDNRKISSTRIRETIAVGDMLKT 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGV 241
             LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY        Q  Y G+
Sbjct: 180 QELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVRLPGDGVYVADVEHNGQ-RYRGM 238

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G+N T      L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L   +  D
Sbjct: 239 ASVGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLIAQLQSD 297

Query: 302 EKKAR 306
           E+ AR
Sbjct: 298 ERIAR 302


>gi|254467869|ref|ZP_05081275.1| riboflavin biosynthesis protein RibF [beta proteobacterium KB13]
 gi|207086679|gb|EDZ63962.1| riboflavin biosynthesis protein RibF [beta proteobacterium KB13]
          Length = 296

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 31/301 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ-SSSPIFTLSPPSI 77
           +  IGN+DGIHLGH  ++   I    A N    V++F PHP+   Q  ++P   +S   +
Sbjct: 15  IATIGNYDGIHLGHQSLINHVISESRAKNLESAVITFEPHPKEFFQPKAAPKRVIS---L 71

Query: 78  QEKI----LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           +EK+      K+  + +IR  F    +N     FI+ +L   L V+ ++ G  FRFGK R
Sbjct: 72  REKLEFFHSHKLDRAYVIR--FDENFSNLEGNDFIE-ILKNKLLVEGLVVGDDFRFGKKR 128

Query: 134 AGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
                 L++ G +     T+F+++ R      +SSS +R AL          LLG  + I
Sbjct: 129 QFGINELKQFGIQVTQPGTIFLNDER------ISSSRVRDALQDADFHQVESLLGRPYVI 182

Query: 193 ESDVIHGEKIGRTLGFPTANMQL---SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
              VIHGEK  R LG+PTAN+ +   SP +    GV+A++       S+ GVAN G  PT
Sbjct: 183 AGRVIHGEKKARLLGYPTANVHMFHKSPPL---TGVFAVKL-----DSFFGVANLGLKPT 234

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 L+LE  +FDF + IYG+   V+FF  +R E KF    +L   +  D    ++  
Sbjct: 235 FGGVKNLVLEVHLFDFDKNIYGKHVHVTFFKKIRDEKKFSTTNELSSQIASDVNDVKQFF 294

Query: 310 E 310
           +
Sbjct: 295 K 295


>gi|15643620|ref|NP_228666.1| riboflavin kinase/FMN adenylyltransferase [Thermotoga maritima
           MSB8]
 gi|37926833|pdb|1MRZ|A Chain A, Crystal Structure Of A Flavin Binding Protein From
           Thermotoga Maritima, Tm379
 gi|37926834|pdb|1MRZ|B Chain B, Crystal Structure Of A Flavin Binding Protein From
           Thermotoga Maritima, Tm379
 gi|52695651|pdb|1T6X|A Chain A, Crystal Structure Of Adp Bound Tm379
 gi|52695652|pdb|1T6X|B Chain B, Crystal Structure Of Adp Bound Tm379
 gi|52695653|pdb|1T6Y|A Chain A, Crystal Structure Of Adp, Amp, And Fmn Bound Tm379
 gi|52695654|pdb|1T6Y|B Chain B, Crystal Structure Of Adp, Amp, And Fmn Bound Tm379
 gi|52695655|pdb|1T6Z|A Chain A, Crystal Structure Of Riboflavin Bound Tm379
 gi|52695656|pdb|1T6Z|B Chain B, Crystal Structure Of Riboflavin Bound Tm379
 gi|56553709|pdb|1S4M|A Chain A, Crystal Structure Of Flavin Binding To Fad Synthetase From
           Thermotoga Maritina
 gi|56553710|pdb|1S4M|B Chain B, Crystal Structure Of Flavin Binding To Fad Synthetase From
           Thermotoga Maritina
 gi|4981391|gb|AAD35939.1|AE001752_6 riboflavin kinase/FMN adenylyltransferase [Thermotoga maritima
           MSB8]
          Length = 293

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 33/303 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA----NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV+IG FDG+H+GH  +L    +IA    ++S I  +S+ P      +   P F     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP------EYFLPDFPGLLMT 55

Query: 77  IQEKILEKMGFSALIRYKFTL-----ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++ ++        L RY  T+        + + E F+++ L     V  V+ G  FRFGK
Sbjct: 56  VESRV------EMLSRYARTVVLDFFRIKDLTPEGFVERYLSG---VSAVVVGRDFRFGK 106

Query: 132 DRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + +G+   L+K+G E Y    V +   R      VSSS IR  + +G V      LG  F
Sbjct: 107 NASGNASFLRKKGVEVYEIEDVVVQGKR------VSSSLIRNLVQEGRVEEIPAYLGRYF 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            IE  V    + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  P
Sbjct: 161 EIEGIVHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRP 220

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     +  E +I DF  ++YGQR  +    ++R E KF  IE+LK  + +D K AR +
Sbjct: 221 TVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNM 280

Query: 309 LES 311
           ++ 
Sbjct: 281 IDD 283


>gi|147762|gb|AAA24605.1| protein X (gene x) [Escherichia coli]
          Length = 312

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 9/301 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+H GH  +L+  Q      N P+ V+ F P P  +  +      L+  
Sbjct: 16  EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRL 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L + G   ++  +F    A  +A+ F+  +LV+ L VK +  G  F      A 
Sbjct: 76  REKLRYLAECGVDYVLCVRFDRRFAALTAQNFVSDLLVKHLRVKFLAVGDDFPL----AL 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIV--SSSNIRTALTKGHVLNAAHLLGYRFTIE 193
               +     K  ++T  I  +R   +++   S++ +R AL   ++  A  LLG+ F I 
Sbjct: 132 VVKAISCYYRKLAWNTASISPVRKLFAEVACASAARLRQALADDNLALAESLLGHPFAIS 191

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG+++GRT+GFPTAN+     +   +GVYA+      +    GVAN G  PT V  
Sbjct: 192 GRVVHGDELGRTIGFPTANVPPRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPT-VAG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
               LE  + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + 
Sbjct: 251 IRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTK 310

Query: 314 P 314
           P
Sbjct: 311 P 311


>gi|220915774|ref|YP_002491078.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953628|gb|ACL64012.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 323

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           + VF + E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PH
Sbjct: 5   VQVFRSPE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRSAGVLTFEPH 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV
Sbjct: 64  PVRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFAARDLAGRLEV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+
Sbjct: 124 ADVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGN 181

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR---TQDQ 235
           V  AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R        +
Sbjct: 182 VEAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATT-GLLPANGVYVVRAELGGAHRE 240

Query: 236 TSYSGVA------NFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKF 288
           T  SG A      N G  PT+      + E+ +F F  +++YG    ++F   LR E +F
Sbjct: 241 TGLSGAAVHGGVCNVGVKPTVESGASPVAEAHLFGFDGRDLYGTPIRLAFLARLRDEQRF 300

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E L+  +  D + A ++L
Sbjct: 301 PSVEALRAQIARDVEAAHRVL 321


>gi|322516810|ref|ZP_08069712.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           ATCC 49124]
 gi|322124647|gb|EFX96111.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           ATCC 49124]
          Length = 303

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 13/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA++    + VL+FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADDKQLEVAVLTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + E  G   L    F  + A  S++ FI +  ++ L+ + V+ G  ++FG  R
Sbjct: 76  APQRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIAR-YIKRLKAQEVVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +         V + E + +  + +SS+ +R  + +G V  A +LLG+ F+  
Sbjct: 135 T-DADYLARNFSG----RVHVIEEQQSDGEKISSTRVRQLIREGKVKEANYLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +    L   GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTYLPAYGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              L LE+ IFDF  +IYG+   V + DY+R  IKF +I+ L   +  D+K A K
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDDLCNQLEADKKIAEK 302


>gi|225629854|ref|ZP_03787764.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591290|gb|EEH12420.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 310

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 12/299 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+A     P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +  +I SSS+IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTID-GKICSSSSIREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR--FRTQDQ 235
           +  A  LLG  + +   V  G   GR +GFPT N+ +   ++  K G Y  R  F   + 
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIEDRMIKPKFGTYYARVTFPDSNP 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               GV N G  PT       ++E  IFDF +++Y  +  +    ++R E K   IE+L
Sbjct: 234 NWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKSHSIEEL 292


>gi|88608739|ref|YP_505942.1| riboflavin biosynthesis protein RibF [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600908|gb|ABD46376.1| riboflavin biosynthesis protein RibF [Neorickettsia sennetsu str.
           Miyayama]
          Length = 303

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 13/298 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+H  E+   LP+     VV  GNFDG+HLGH  +L     ++  + +   V++F+PH
Sbjct: 1   MQVYHTPEL---LPH---PSVVTFGNFDGVHLGHLALLSALSGVSKLADLHRVVITFDPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++     F ++    +  +L      +L   KF  E  + S E F+ K L  +L +
Sbjct: 55  PFCFLKRKKD-FLITDQYTKTVLLSPYA-DSLYFIKFDDELRSLSPEDFL-KFLSSFLNL 111

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I     RFGK  +G    ++K  E   +  V I    N+     SS+ +RT++  G 
Sbjct: 112 KYLINAENCRFGKFSSGGIAEIEKYQELLSYKAVVIKPELNDSGSRYSSTLVRTSIKDGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS 237
           +L+A  LLG   +I   +     +  T+GFPT N+ +  +I+  + GVY +    +  T 
Sbjct: 172 MLSARQLLGRYHSIRGIIRRDRGLASTIGFPTINIAIPEEIIKPRLGVYVVDVSIEG-TI 230

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           + G+AN G+ PT   +G ++LE  IF+FS  +YG+  TV    +LR E  F  +E+L+
Sbjct: 231 HRGIANIGKRPTTSGSGEVILEVHIFNFSDNVYGKDATVYLKAFLREEKLFPSVERLR 288


>gi|325957043|ref|YP_004292455.1| riboflavin kinase [Lactobacillus acidophilus 30SC]
 gi|325333608|gb|ADZ07516.1| riboflavin kinase [Lactobacillus acidophilus 30SC]
 gi|327183766|gb|AEA32213.1| riboflavin kinase [Lactobacillus amylovorus GRL 1118]
          Length = 309

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 153/289 (52%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++++A +IA+  N P+ V++F+ HP+ + +       L     +
Sbjct: 20  VLALGFFDGVHLGHQKLIKRAKEIADQKNLPLVVMTFDRHPKEVYEDKKNFKYLETLEEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT E +   A+ F+  V+V+ L   T++ G  + +G     +  
Sbjct: 80  ADKMSELGVDYLAVMPFTKEFSQIGAQDFVDNVIVK-LNADTIVAGFDYTYGPKEIANMD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +  G   + +   +    + + S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 139 RLPDYAK--GRFDIVVMPKQIFAGKKIGSTEIRQAIKDGDMELAYELMGHHYVMSGIIGH 196

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+  +   ++ K GVYA +    D   Y  + + G N T+     + 
Sbjct: 197 GKRNGHKLGFPTANLIWADHKVIPKIGVYATKTEI-DGKWYDSMTSVGYNVTIGQEKKIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +ES +F+F +++YG+   + ++ Y R EIKF ++++LK  + +D+++ +
Sbjct: 256 IESNLFNFDEDVYGKPMKIKWYKYTRGEIKFANLDELKKQLEKDQEEIK 304


>gi|329121248|ref|ZP_08249875.1| riboflavin biosynthesis protein [Dialister micraerophilus DSM
           19965]
 gi|327470182|gb|EGF15645.1| riboflavin biosynthesis protein [Dialister micraerophilus DSM
           19965]
          Length = 317

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 10/298 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V AIG FDGIH GH  IL Q  K+A        +++F PHP ++I   +P+  +   + +
Sbjct: 17  VFAIGFFDGIHKGHQEILNQTKKLAAKKSAKSGIITFYPHPLSVIFPENPVKLILTQTEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL+K     +I  K  +E  + S E+F+ K L ++  +K +I G  F FG   +G+  
Sbjct: 77  YEILKKYNLDIIIEIKPDIEFLHQSHEEFLNK-LKKFSNLKGIIVGENFTFGYKGSGNAE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            ++K   K       I+ ++N    + ++SS+NIR  +  G++  A   LG  + I   +
Sbjct: 136 TMKKFF-KNEVEVKKINLIKNTLTDNTVISSTNIRKFIADGNMREAMKFLGRPYFITDKI 194

Query: 197 IHGEKIG-RTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG K G   LG PTAN++   + +L  +GVYA     +    +  + N G NPT   + 
Sbjct: 195 VHGFKRGSELLGIPTANLEYGFERMLPSDGVYATYIEVKGN-KHPSITNIGTNPTF-NDK 252

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              +E+FI DF +EIYGQ   + + + +R EIKF+  + L + + +D +KA +IL+ S
Sbjct: 253 ERTIETFILDFDEEIYGQIVKLEWIEKVRDEIKFEKYQDLILQIKKDIEKAGEILKRS 310


>gi|297626621|ref|YP_003688384.1| riboflavin biosynthesis protein (riboflavin kinase) FAD synthetase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922386|emb|CBL56958.1| Riboflavin biosynthesis protein (Riboflavin kinase) FAD synthetase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 325

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN-------NSPITVLSFNPHPRTIIQSSSPIFTLS 73
           VV IGNFDG+H GH  +L+ A + A+       +  +  ++  PHP T+  +      L+
Sbjct: 5   VVVIGNFDGVHQGHQRLLQVARERAHTLAEGGRDLKVIAVTLWPHPMTVFAADRAPRLLT 64

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + ++L   G   +   +F  E A++S E+F+   +V  L    VI G  F FGK  
Sbjct: 65  TLDDRLRLLRHYGADEVRVIQFNREVASWSPERFVD-TMVRPLNPAVVIVGANFTFGKGA 123

Query: 134 AGDRGILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            G    L++  G  +    + +  +   K+   SSS IR  L  G V  AAH LG  F +
Sbjct: 124 RGTGETLRELSGGDFEVQNLGLVSVGGRKT---SSSFIRRTLAAGDVATAAHHLGRTFRV 180

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS---YSGVANFGRNP 248
              V+ G++ G TLGFPTAN+ +S ++    +GVYA      D+          + G NP
Sbjct: 181 TGVVMVGDQRGHTLGFPTANLAISAELATPGDGVYAGWLTPLDEPDAEPLEAAISVGTNP 240

Query: 249 TMVPNG-PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T   +G    +ES++ D +   +YG+   V F ++LR   +F DI++L   M  D K+ R
Sbjct: 241 TF--DGVERRVESYVVDRTDLHLYGRHIAVDFVEHLRGMARFHDIDELITQMHSDVKRTR 298

Query: 307 KILESSYPLS 316
           ++L+++ P +
Sbjct: 299 EVLDATRPTA 308


>gi|331266252|ref|YP_004325882.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus oralis Uo5]
 gi|326682924|emb|CBZ00541.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus oralis Uo5]
          Length = 308

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKKTA 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +     + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 139 DDL----KDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVKEVNHLLGTPLPTRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  IE+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSIEELVDQLQKDEEIAR 302


>gi|162455215|ref|YP_001617582.1| riboflavin biosynthesis protein [Sorangium cellulosum 'So ce 56']
 gi|161165797|emb|CAN97102.1| Riboflavin biosynthesis protein [Sorangium cellulosum 'So ce 56']
          Length = 311

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 24/291 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IGNFDG+HLGH  +L  A   A    +    L+F PHP +++  + P    + P   
Sbjct: 1   MVIIGNFDGVHLGHQALLADAALDAERRGLEPVALTFAPHPASVLGRTPPATLTALPRKI 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E I        +    F    A  + E+F+++VL++ L  + V+ G  FRFG+ RAGD  
Sbjct: 61  ELIQRVQPAIRVDAVTFDRAFAAQTPEEFVRRVLLDRLAARVVLVGANFRFGRGRAGDFT 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + GE  GF T     L  +     SS+ +R AL +G + +A  +L     +   V  
Sbjct: 121 TLGRLGEDLGFETRS-HPLVGDAEGAWSSTRVRAALARGDLESAERMLSRPHMLSGVVAQ 179

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS--------GVANFGRNPTM 250
           G + GRT+GFPT N+    + L   GVYA      D+ + S        GVAN G  PT+
Sbjct: 180 GARRGRTIGFPTCNIDEIDEALPPFGVYAT---LVDRVTSSGRAIALARGVANLGVRPTV 236

Query: 251 ------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                  PN    LE  +FD  +++YG    V     LR E +F  + +LK
Sbjct: 237 EASRQARPN----LEVHLFDVDEDLYGAALRVHLIARLREERRFSGLPELK 283


>gi|315038570|ref|YP_004032138.1| riboflavin kinase [Lactobacillus amylovorus GRL 1112]
 gi|312276703|gb|ADQ59343.1| riboflavin kinase [Lactobacillus amylovorus GRL 1112]
          Length = 309

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 152/289 (52%), Gaps = 7/289 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++++A +IA+  N P+ V++F+ HP+ + +       L     +
Sbjct: 20  VLALGFFDGVHLGHQKLIKRAKEIADQKNLPLVVMTFDRHPKEVYEDKKNFKYLETLEEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT E +   A+ F+  V+V+ L   T++ G  + +G     +  
Sbjct: 80  ADKMSELGVDYLAVMPFTKEFSQIGAQDFVDNVIVK-LNADTIVAGFDYTYGPKEIANMD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +  G   + +   +    + + S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 139 RLSDYAK--GRFDIVVMPKQIFAGKKIGSTEIRQAIKDGDMELAYELMGHHYVMSGIIGH 196

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+  +   ++ K GVYA +    D   Y  + + G N T+     + 
Sbjct: 197 GKRNGHKLGFPTANLIWADHKVIPKIGVYATKTEI-DGKWYDSMTSVGYNVTIGQEKKIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +ES +F+F +++YG+   + ++ Y R EIKF  +++LK  + +D+++ +
Sbjct: 256 IESNLFNFDEDVYGKPMKIKWYKYTRGEIKFAKLDELKKQLEKDQEEIK 304


>gi|190570919|ref|YP_001975277.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019435|ref|ZP_03335241.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357191|emb|CAQ54607.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994857|gb|EEB55499.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 310

 Score =  129 bits (323), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 14/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + +N E  Q + +++    +  GNFDG+HLGH   +    K+A     P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIKDNV---ALTFGNFDGVHLGHKFAISNLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++ S +  F L     +++++   G   L    F    +  S + FI K+LV+    
Sbjct: 56  PSTVLFSRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFIGKILVKKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G    FG  R G+   L+K  + Y +    ++ L  ++ +I SSS+IR  L KG 
Sbjct: 115 KHITVGESCTFGHKRLGNILTLEKYSQVYEYSLTKLEPLIIDR-KICSSSSIRECLQKGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVY--AIRFRTQD 234
           +  A  LLG  + +   V  G   GR +GFPT N+ +  D ++K   G Y   + F    
Sbjct: 174 IEIANKLLGRSYQVSGIVTKGACRGREIGFPTINIPIE-DYMIKPKLGTYYAKVAFSENS 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            +   GV N G  PT       ++E  IFDF++ +Y  +  +    ++R E KF  I +L
Sbjct: 233 SSWLYGVVNIGMRPTFKDLKKPIVEMHIFDFNENVYNFKVDIQLLKFIRAEKKFHSINEL 292

Query: 295 KIYMGEDEKKARKI 308
              +  D  KA ++
Sbjct: 293 TKQIDRDIMKAYQL 306


>gi|168492005|ref|ZP_02716148.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC0288-04]
 gi|183573787|gb|EDT94315.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC0288-04]
          Length = 305

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPIEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|258544243|ref|ZP_05704477.1| riboflavin biosynthesis protein RibF [Cardiobacterium hominis ATCC
           15826]
 gi|258520481|gb|EEV89340.1| riboflavin biosynthesis protein RibF [Cardiobacterium hominis ATCC
           15826]
          Length = 313

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 144/315 (45%), Gaps = 14/315 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           H  +   +LP  +    + IGNFDG+H GH  IL+  +  A    +   +LSF PHP+ +
Sbjct: 4   HRWQRRLALPQPV---ALTIGNFDGVHRGHQAILQTLLAEAAREDLAPVLLSFFPHPKAL 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   SP   L+P   +   L   G    +   FT      +   FI+  L+       ++
Sbjct: 61  VSGESPSL-LTPLRDRAHWLAAAGLPHWLLLSFTRALMQKAPADFIRDYLLPLRLRFLLV 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG    GD  +LQ+  ++ GF    +  +  + ++I SSS IR AL    +  A
Sbjct: 120 -GDDFRFGYRGQGDFALLQRFADECGFRVQSLATVSADGARI-SSSRIRAALAAHDLDGA 177

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSYSGV 241
             LLG+  T    V HG+  GR L  PTAN+ L     L +GVY ++    Q    + GV
Sbjct: 178 RALLGHDLTFTGKVRHGDGRGRALHTPTANLHLPASWCLPDGVYVVQVAPPQPGALHWGV 237

Query: 242 ANFGRNPTMVPNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           AN G  PT    G +   LE  +F+ +  +YGQ   V    YLR   +F D   L+  + 
Sbjct: 238 ANVGTTPTF---GGIRRKLEVHVFEQNAALYGQTLRVHIRHYLRDVRRFADAAALQAQIR 294

Query: 300 EDEKKARKILESSYP 314
           +D  +A   +    P
Sbjct: 295 DDIARAHAFINQELP 309


>gi|15827378|ref|NP_301641.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium leprae TN]
 gi|221229855|ref|YP_002503271.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium leprae Br4923]
 gi|2342621|emb|CAB11394.1| riboflavin kinase [Mycobacterium leprae]
 gi|13092928|emb|CAC31233.1| putative riboflavin kinase [Mycobacterium leprae]
 gi|219932962|emb|CAR70947.1| putative riboflavin kinase [Mycobacterium leprae Br4923]
          Length = 331

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 19/314 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++   ++   A N P  +++F+PHP  ++   S   
Sbjct: 18  IPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLMTFDPHPMEVVYPGSHPA 77

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F FG
Sbjct: 78  QLTTLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLVEHLHVVEVVVGENFTFG 137

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+  +L++ G+++GF       + E R N++   SS+ IR+ +  G ++ A   LG
Sbjct: 138 KKAAGNVIMLRRAGQRFGFAVGSMSLLSEHRGNETVAFSSTYIRSCVDAGDMMAATEALG 197

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ---------- 235
               +E  V+ G+  G  LGFPTAN+  SP       +GVYA  F               
Sbjct: 198 RPHRVEGMVVRGQGRGTELGFPTANVA-SPMYSATPADGVYAAWFTVLGHGPVTGTVVPG 256

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y    + G NPT        +E+F+ D   ++YGQ   + F   +R + KF  +  L 
Sbjct: 257 ECYQAAVSVGTNPTF-SGRTRTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSVADLV 315

Query: 296 IYMGEDEKKARKIL 309
             M +D  +AR +L
Sbjct: 316 AEMEKDIDRARALL 329


>gi|15903061|ref|NP_358611.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae R6]
 gi|116517107|ref|YP_816469.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae D39]
 gi|148985083|ref|ZP_01818326.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP3-BS71]
 gi|148989154|ref|ZP_01820544.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP6-BS73]
 gi|149003772|ref|ZP_01828604.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP14-BS69]
 gi|149012894|ref|ZP_01833807.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP19-BS75]
 gi|149024912|ref|ZP_01836313.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP23-BS72]
 gi|168486475|ref|ZP_02710983.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1087-00]
 gi|168493054|ref|ZP_02717197.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC3059-06]
 gi|169832490|ref|YP_001694531.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae Hungary19A-6]
 gi|182684141|ref|YP_001835888.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae CGSP14]
 gi|221231847|ref|YP_002510999.1| riboflavin biosynthesis protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854606|ref|YP_002736118.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae JJA]
 gi|225858920|ref|YP_002740430.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae 70585]
 gi|225861073|ref|YP_002742582.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|237822366|ref|ZP_04598211.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229875|ref|ZP_06963556.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254155|ref|ZP_06977741.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502873|ref|YP_003724813.1| FAD synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254182|ref|ZP_07340294.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae BS455]
 gi|303259773|ref|ZP_07345748.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP-BS293]
 gi|303262948|ref|ZP_07348883.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264910|ref|ZP_07350826.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS397]
 gi|303266891|ref|ZP_07352769.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS457]
 gi|303268927|ref|ZP_07354712.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS458]
 gi|307127359|ref|YP_003879390.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           670-6B]
 gi|15458634|gb|AAK99821.1| Macrolide-efflux protein [Streptococcus pneumoniae R6]
 gi|116077683|gb|ABJ55403.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae D39]
 gi|147758218|gb|EDK65220.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP14-BS69]
 gi|147763183|gb|EDK70123.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP19-BS75]
 gi|147922781|gb|EDK73898.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP3-BS71]
 gi|147925377|gb|EDK76455.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP6-BS73]
 gi|147929535|gb|EDK80529.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP23-BS72]
 gi|168994992|gb|ACA35604.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182629475|gb|ACB90423.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae CGSP14]
 gi|183570529|gb|EDT91057.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1087-00]
 gi|183576605|gb|EDT97133.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674307|emb|CAR68850.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           ATCC 700669]
 gi|225721286|gb|ACO17140.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           70585]
 gi|225724053|gb|ACO19906.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae JJA]
 gi|225727774|gb|ACO23625.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238468|gb|ADI69599.1| possible FAD synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794223|emb|CBW36643.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           INV104]
 gi|301800075|emb|CBW32672.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           OXC141]
 gi|301802001|emb|CBW34730.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           INV200]
 gi|302598853|gb|EFL65887.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae BS455]
 gi|302635925|gb|EFL66425.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638978|gb|EFL69438.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP-BS293]
 gi|302641545|gb|EFL71907.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS458]
 gi|302643589|gb|EFL73858.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS457]
 gi|302645598|gb|EFL75829.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS397]
 gi|306484421|gb|ADM91290.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           670-6B]
 gi|332075064|gb|EGI85535.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA17545]
 gi|332200512|gb|EGJ14584.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA41317]
          Length = 305

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|281424888|ref|ZP_06255801.1| riboflavin biosynthesis protein RibF [Prevotella oris F0302]
 gi|281401006|gb|EFB31837.1| riboflavin biosynthesis protein RibF [Prevotella oris F0302]
          Length = 313

 Score =  128 bits (322), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 151/309 (48%), Gaps = 21/309 (6%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTL 72
           N +   V  IG FDG+H GH  +++  I  A    +  TV++F+ HPR ++ S      L
Sbjct: 11  NAIAPCVATIGFFDGVHRGHQYLIKHVIDKAKACGLASTVITFDRHPRQVLHSDYVPQLL 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  +L K G        F   TA  SA  F+++VL + L VK +I G   RFG +
Sbjct: 71  TTLENKLLLLSKTGIDNAAVLPFDEATARLSAFDFMRQVLHDRLNVKQLIIGYDNRFGHN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-----VSSSNIRTALTKGHVLNAAHLLG 187
           R  D     + G + G       E+ +N++ +     VSSS IR+ L  G +  A   LG
Sbjct: 131 REEDFEDYVRYGNELGI------EVIHNQAYVLNGVNVSSSVIRSFLQAGEIEMATLCLG 184

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ-TSYSGVANF 244
           Y +T+   V+HG   GR +GFPTAN+    S  ++   GVYA++ + ++  T   G+ N 
Sbjct: 185 YSYTLVGKVVHGFAQGRKMGFPTANIDTTESGQLVPAPGVYAVKVKIENTVTLLHGMMNI 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT      L LE  IF+   ++YG++  V F   +R E KF +     + + E  +K
Sbjct: 245 GMRPTF-DGSKLTLEVNIFNLQGDLYGKQLQVVFIHRIREERKFNN----ALGLAEQLQK 299

Query: 305 ARKILESSY 313
            R  +E  +
Sbjct: 300 DRLQIEEQF 308


>gi|148994559|ref|ZP_01823718.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP9-BS68]
 gi|168483188|ref|ZP_02708140.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1873-00]
 gi|168488955|ref|ZP_02713154.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP195]
 gi|147927153|gb|EDK78190.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP9-BS68]
 gi|172043328|gb|EDT51374.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1873-00]
 gi|183572583|gb|EDT93111.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP195]
          Length = 305

 Score =  128 bits (322), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVEQLKADEEVTR 302


>gi|148998380|ref|ZP_01825822.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576165|ref|ZP_02722059.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           MLV-016]
 gi|194398283|ref|YP_002037738.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae G54]
 gi|307067708|ref|YP_003876674.1| FAD synthase [Streptococcus pneumoniae AP200]
 gi|147755777|gb|EDK62822.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP11-BS70]
 gi|183578016|gb|EDT98544.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           MLV-016]
 gi|194357950|gb|ACF56398.1| macrolide-efflux protein [Streptococcus pneumoniae G54]
 gi|306409245|gb|ADM84672.1| FAD synthase [Streptococcus pneumoniae AP200]
          Length = 305

 Score =  128 bits (322), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|116333938|ref|YP_795465.1| FAD synthase [Lactobacillus brevis ATCC 367]
 gi|116099285|gb|ABJ64434.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus brevis
           ATCC 367]
          Length = 315

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG+H GH  ++ +A  +A    + + VL+++ HP  + +   +     LS P+
Sbjct: 21  VLAMGFFDGVHRGHQAVIARAKALAQEKQAKLAVLTYDHHPALVYRPLEADDRKYLSIPT 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + LE++G   +    +T E A+ S ++F+   LV +  V   + G    +GK     
Sbjct: 81  RKLQQLERLGVERVFLVNYTGEFASQSPQEFVDHYLVAFHTV-VAVAGFDHTYGKKDVAT 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G  TV          Q +SS+ IR A+ +G +  A  LLGY +     V
Sbjct: 140 MDRLADYAK--GRFTVETVAQEAQDQQKISSTRIRQAMKQGDIDLANQLLGYPYRSTGVV 197

Query: 197 IHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HGE  GRT+G+PTAN+ L+P+   L   G+Y  R +      Y G+ + GRN T     
Sbjct: 198 VHGEARGRTIGYPTANI-LTPENQWLPGIGIYTARLKV-GAIWYPGMVSIGRNVTFGDGR 255

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           P+ +E  + DF   +YG+   V +   LR EIKF D + L   + +DE++ R   +
Sbjct: 256 PITVEMNLLDFQGNLYGEPVEVEWQHRLRGEIKFADADGLVDQLQQDERETRAYFQ 311


>gi|322372970|ref|ZP_08047506.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C150]
 gi|321278012|gb|EFX55081.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C150]
          Length = 303

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 149/295 (50%), Gaps = 13/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLS 73
           K  V+ +G FD +H GH ++ ++A +IA+     + VL+FN  P+   Q  +   +  ++
Sbjct: 16  KETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNESPQLTFQRYTDDLLLHIT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +  + E  G   L    F  + A  S++ FI +  ++ L+ + ++ G  ++FG  R
Sbjct: 76  APQRRCNLFEAYGTDQLYLTDFNSDFARTSSDDFIDR-YIKRLKAQEIVVGFDYKFGHHR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L +         V + E + +  + +SS+ +R  + +G V  A  LLG+ F+  
Sbjct: 135 T-DADYLARNFSG----RVHVIEEQQSDGEKISSTRVRQLIREGKVKEANDLLGHEFSTR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GRT+GFPTAN+  +    L  +GVY       D   Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRTIGFPTANLAPIDRTFLPADGVYVADV-VIDGKRYRSMTSLGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              L LE+ IFDF  +IYG+   V + +Y+R  +KF  I++L   +  D+K  RK
Sbjct: 248 GTELRLEANIFDFEGDIYGKTIEVFWLEYIRDMVKFNSIDELCGQLNADKKNRRK 302


>gi|197294509|ref|YP_001799050.1| Putative riboflavin kinase [Candidatus Phytoplasma australiense]
 gi|171853836|emb|CAM11785.1| Putative riboflavin kinase [Candidatus Phytoplasma australiense]
          Length = 304

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 152/295 (51%), Gaps = 15/295 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +A G+FDG+HLGH  IL++ +   +     +++F P+ +  +Q     F     S+++KI
Sbjct: 20  LAFGDFDGLHLGHQKILQKLLSFQDTKS-ALINFVPNSKAFLQQKEDFFL---TSLEQKI 75

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
                +    L  + +  + A      FI+  L++ + VK VI   + RFG  + G+   
Sbjct: 76  TFYRFLKLDYLFLWHWNQKLACLKKTDFIR--LLQKINVKRVIITQESRFGYQKEGNYQT 133

Query: 140 LQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L++ G    F    ID+    N   Q +S++ I+  LT+G + +A   L   + I+  VI
Sbjct: 134 LKQAG----FLVDLIDDYVKPNGCQQKISTTYIKKLLTQGKIDDANLYLSRPYKIQGKVI 189

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G++ GR LGF TAN++L    L + GVYA+ F T  +  Y+G+AN G  PT       L
Sbjct: 190 QGKQRGRLLGFRTANLELINFFLPRLGVYAV-FVTYKKEKYAGIANLGVRPTFEQKPQKL 248

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LE  + +F Q +Y Q   V F  +LR E KF+++ +L   + +D   A+ +L++ 
Sbjct: 249 LEIHLLNFDQNLYHQTIEVEFIAFLRNEKKFENVSQLIFQIKKDVLDAKTLLKTK 303


>gi|296394404|ref|YP_003659288.1| riboflavin biosynthesis protein RibF [Segniliparus rotundus DSM
           44985]
 gi|296181551|gb|ADG98457.1| riboflavin biosynthesis protein RibF [Segniliparus rotundus DSM
           44985]
          Length = 323

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 24/320 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + +P      V+ IG FDG+H GH  ++ + +  A     P  +++F+PHP  +I++   
Sbjct: 8   EDIPPDWGRCVLTIGTFDGVHRGHVELVRRTVNEARKRRLPSALITFDPHPAQVIRAGDH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + +++ ++G        FT E A  SAE+F+ ++LV  L V  V+ G  F 
Sbjct: 68  PAQLTTLARRAELVGQLGIDVFCVIPFTRELAKQSAEEFVHELLVSRLHVAKVLVGENFT 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG    G+  +L + G+++GF    +  L       VSS+ IR+ +  G V  AA  LG 
Sbjct: 128 FGHRATGNIDMLVELGKRFGFEAESV-RLFAEHDVTVSSTYIRSVVAAGDVAAAAEALGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRF------------RTQ 233
              +E  V+HG+  GR LGFPTAN  ++P +   +  +GVYA  F              Q
Sbjct: 187 PHRVEGVVVHGDGRGRELGFPTAN--VAPPMYAAIPADGVYAAWFSISSPARPSAPGSKQ 244

Query: 234 DQTSYSGVA---NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           ++ S   VA   + G NPT        +E+++ D   ++YGQ   V F   LR    F+ 
Sbjct: 245 NRASLGRVAAAVSVGTNPTF-SGRERTVEAYVLDKDVDLYGQYVAVDFVRRLRDMWAFQS 303

Query: 291 IEKLKIYMGEDEKKARKILE 310
            E+L   + +D +  RK L+
Sbjct: 304 REELIDAIAKDVEDTRKALQ 323


>gi|170287877|ref|YP_001738115.1| riboflavin biosynthesis protein RibF [Thermotoga sp. RQ2]
 gi|170175380|gb|ACB08432.1| riboflavin biosynthesis protein RibF [Thermotoga sp. RQ2]
          Length = 293

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 33/303 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA----NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV+IG FDG+H+GH  +L    +IA    ++S I  +S+ P      +  SP F     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP------EYFSPDFPGLLMT 55

Query: 77  IQEKILEKMGFSALIRYKFTL-----ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++ ++        L RY  T+        + + E F+++ L     V  V+ G  FRFGK
Sbjct: 56  VESRV------EMLSRYARTVVLDFFRIKDLTPEGFVERYLSG---VSAVVVGRDFRFGK 106

Query: 132 DRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + +G+   L+K+G E Y    V +   R      VSSS IR  + +G V      LG  F
Sbjct: 107 NVSGNASFLRKKGIEVYEIEDVVVQGKR------VSSSLIRNLVQEGRVEEILAYLGRYF 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            IE  V    + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  P
Sbjct: 161 EIEGIVHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRP 220

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     +  E +I DF  ++YG++  +    ++R E KF  IE+LK  +  D K+AR +
Sbjct: 221 TVGDARNVKYEVYILDFEGDLYGKKLKLEVLKFMRDEKKFGSIEELKAAIDHDVKRARNM 280

Query: 309 LES 311
           ++ 
Sbjct: 281 IDD 283


>gi|302872109|ref|YP_003840745.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574968|gb|ADL42759.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 305

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 11/284 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG H+GH  + E     A      V +F  HP  ++      F +      E+ 
Sbjct: 16  VALGFFDGFHIGHKKLFEVLDANARGRKKVVFTFKNHPDNLLG-----FNIKYILTNEER 70

Query: 82  LE---KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           LE         +   +F  +      ++FI+++L++ L V  V+ G  F FG    GD  
Sbjct: 71  LEFFRNYSIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSVVVVGYDFTFGYMAEGDSK 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L ++  ++G   + ID +   +  IVSS+ IR  + +G++  A  +LG+ F I   V  
Sbjct: 131 YLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIKLANCMLGFNFFINGTVKR 189

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G ++G+ +GFPT N++   + I+ ++GVY I     D   Y  + N G NPT+  +  + 
Sbjct: 190 GNRLGKKIGFPTINIKFDKEKIVPRKGVY-ITNTIIDDKRYLSITNVGTNPTVSASENIK 248

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           +E+ I    + +YG+R  + F D++R E KF +I++LK  + +D
Sbjct: 249 IETHILSVDKNMYGKRVKIEFIDFVREEKKFSNIDELKNQIAKD 292


>gi|293365561|ref|ZP_06612270.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|307703516|ref|ZP_07640458.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|291315929|gb|EFE56373.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|307622923|gb|EFO01918.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
          Length = 316

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                   + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 137 --TADDLKDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVKEVNHLLGTPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIAR 302


>gi|332075444|gb|EGI85913.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA41301]
          Length = 305

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYIVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|295426202|ref|ZP_06818864.1| riboflavin biosynthesis protein RibF [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064111|gb|EFG55057.1| riboflavin biosynthesis protein RibF [Lactobacillus amylolyticus
           DSM 11664]
          Length = 313

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++  A  IA     P+ V++F+ HP  +         +     +
Sbjct: 20  VLALGFFDGVHLGHQHLINVAKNIAEEKHLPLAVMTFDRHPVEVYADDHAFQYIDTVDEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + K+G    +  KFT + +  S + F+  VLV  L  +TV+ G  + +G     +  
Sbjct: 80  AEKMAKLGVDYFLVMKFTKQFSQISGQDFVDHVLVA-LNAETVVAGFDYTYGPKDVANMD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +K  F  V + +   +  +I  S+ IR A+ +G +  A  LLG+ + +   + H
Sbjct: 139 NLPVFAKKR-FEIVKVPKQTFDGKKI-GSTEIRKAINEGKMELAYDLLGHHYVMSGIIGH 196

Query: 199 GEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+   +   + K GVYA R +   Q  Y  + + G N T+     + 
Sbjct: 197 GKRNGHKLGFPTANLVWQNKKAIPKIGVYATRTKVNGQW-YESMTSVGYNVTIGQEKRIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES IFDF +++YG+   + ++ Y R EIKF  +  LK  + +D+
Sbjct: 256 IESNIFDFDEDVYGKPMEIKWYKYTRGEIKFDSLAALKEQLKKDQ 300


>gi|306825117|ref|ZP_07458459.1| riboflavin biosynthesis protein RibF [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304432553|gb|EFM35527.1| riboflavin biosynthesis protein RibF [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 308

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                   + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 137 --TADDLKDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVKEVNHLLGTPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIAR 302


>gi|229495812|ref|ZP_04389540.1| riboflavin biosynthesis protein RibF [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317386|gb|EEN83291.1| riboflavin biosynthesis protein RibF [Porphyromonas endodontalis
           ATCC 35406]
          Length = 323

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 8   EINQSLPNHLKGGVVA-IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ 64
           E++   P  L   VVA IG FDG+H GH  ++EQ    A     P  V++F+  P  +++
Sbjct: 13  ELSCESPELLPEQVVATIGVFDGVHGGHRFLIEQLKHEAQRLRLPSAVITFDTPPVMVVR 72

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
              P   L+  + +E++L K G   L    F    A  SAE+F + ++   L V T++ G
Sbjct: 73  PDHPFEKLNSNTEREQLLAKTGVDFLFLLPFDWALAALSAEEFFRHIITRQLHVHTLLMG 132

Query: 125 TKFRFGKD-RAGDRGILQKR-GEKYGFHTV----FIDELRNNKSQIVSSSNIRTALTKGH 178
               FG+  +AGD     K  GEK+G   +    F DE    + +  SSS IR  L   +
Sbjct: 133 YDHHFGRPPKAGDPPTDYKSLGEKWGVRVLPQEPFFDE---KEGKPYSSSRIRKLLRADN 189

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           +  A  LLGY F I  +V  G  IG+TLGFPTAN+Q   +  ++   GVYA+ +    + 
Sbjct: 190 LSLANQLLGYNFRITGEVKGGLGIGKTLGFPTANIQPEDAHKLIPPLGVYAV-WAHLGEA 248

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+   G  PT+       +E  +F+F   +Y ++  V    + R E +F   E+L  
Sbjct: 249 RYGGMLYIGNRPTIADGLERTIEVNLFNFQGNLYDKKIAVELIAHTRGEARFSSYEELSQ 308

Query: 297 YMGEDEKKARKIL 309
            + +D +  + +L
Sbjct: 309 ALRQDAEITQGLL 321


>gi|320533272|ref|ZP_08033975.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134512|gb|EFW26757.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 316

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 151/305 (49%), Gaps = 14/305 (4%)

Query: 24  IGNFDGIHLGHHLILEQAIKIA------NNSPITV-LSFNPHPRTIIQSSSPIFTLSPPS 76
           +G FDG+H GH  +L + ++++      +  P+ V ++F+PHPR++ Q  + +  ++  +
Sbjct: 1   MGIFDGVHRGHQAVLGRVVELSHELAHGDRRPLAVAITFDPHPRSVHQPEADLPLIASLT 60

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   LE +G  A++   +TL+ A+ + + F++  L   L  + V+ G   RFG   AGD
Sbjct: 61  DRLTSLEDLGLDAVLVITYTLDFASQNPQDFVRTWLEGLLGARAVVVGDDVRFGWRNAGD 120

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++ G   GF    +  +R+++ +  SS+ IR  L  G++   + +LG    +   V
Sbjct: 121 AATLEQIGRADGFEVEIVSTIRSDEGRRWSSTWIRQCLKDGNMGQVSRVLGRPHRLRGVV 180

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYA---IRFRTQDQT--SYSGVANFGRNPTM 250
           + G + GR LGFPTAN++ +   ++  +GVYA   IR      +        + G NPT 
Sbjct: 181 VRGLRRGRELGFPTANLEAATAGVVPPDGVYAGWLIRGGGDGGSVQRLPAAISIGTNPTF 240

Query: 251 VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  +E+ +   +   +YG+   V   + LRP + F  ++ L   M  D +   +IL
Sbjct: 241 DDVPQRTVEAHVLGRADLNLYGEEVGVELVERLRPMLAFDGLDPLLAQMRSDIEDTARIL 300

Query: 310 ESSYP 314
               P
Sbjct: 301 GVPVP 305


>gi|119390018|pdb|2I1L|A Chain A, Crystal Structure Of The C2 Form Of Fad Synthetase From
           Thermotoga Maritima
 gi|119390019|pdb|2I1L|B Chain B, Crystal Structure Of The C2 Form Of Fad Synthetase From
           Thermotoga Maritima
          Length = 293

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 144/298 (48%), Gaps = 23/298 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA----NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV+IG FDG+H+GH  +L    +IA    ++S I  +S+ P      +   P F     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTXKEIAFFRKDDSLIYTISYPP------EYFLPDFPGLLXT 55

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           ++ ++     ++  +   F     + + E F+++ L     V  V+ G  FRFGK+ +G+
Sbjct: 56  VESRVEXLSRYARTVVLDF-FRIKDLTPEGFVERYLSG---VSAVVVGRDFRFGKNASGN 111

Query: 137 RGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              L+K+G E Y    V +   R      VSSS IR  + +G V      LG  F IE  
Sbjct: 112 ASFLRKKGVEVYEIEDVVVQGKR------VSSSLIRNLVQEGRVEEIPAYLGRYFEIEGI 165

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V    + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+   
Sbjct: 166 VHKDREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVXNVGFRPTVGDA 225

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +  E +I DF  ++YGQR  +    + R E KF  IE+LK  + +D K AR  ++ 
Sbjct: 226 RNVKYEVYILDFEGDLYGQRLKLEVLKFXRDEKKFDSIEELKAAIDQDVKSARNXIDD 283


>gi|227892595|ref|ZP_04010400.1| FAD synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865580|gb|EEJ73001.1| FAD synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 313

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 150/285 (52%), Gaps = 7/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ +A +IA   N P+ V++F+ HP+ I +       L     +
Sbjct: 20  VLALGFFDGVHLGHQRLVRRAKEIAEQKNLPLVVMTFDRHPKEIYEDKKNFKYLETLEEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT + ++  A+ F+  V+V+ L   TV+ G  + +G     +  
Sbjct: 80  ADKMTELGVDYLAVMPFTKKFSSIGAQDFVDNVIVK-LNADTVVAGFDYTYGPKEIANME 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +  G   + +   +  + + + S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 139 HLPDFAK--GRFDIVMMPKQIFEGKKIGSTEIRQAIKDGKMELAYELMGHHYVMSGTIGH 196

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+  +   ++ K GVYA +    D   Y  + + G N T+     + 
Sbjct: 197 GKRNGHKLGFPTANLIWAEHKVIPKIGVYATKTEI-DGKWYESMTSVGYNVTIGQPDKIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +ES +FDF+Q++YG+   + ++ Y R E+KF  +++LK  + +D+
Sbjct: 256 IESNLFDFNQDVYGKPMKIKWYKYTRGEVKFDSLDELKDQLMKDK 300


>gi|299136492|ref|ZP_07029675.1| FAD synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601007|gb|EFI57162.1| FAD synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 322

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IGNFDG+H GH +++   I  A    +   V++F+PHP  I+ ++S +  ++P + +
Sbjct: 18  VVSIGNFDGVHCGHRMVVASVIARAREIGARAAVVTFDPHPAHILHNTSRLPLITPLAEK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L++ G    +   FT E   ++A QF ++VL + L+   V  G  FRFG        
Sbjct: 78  LELLDQTGVDLALVLPFTEELRLWTARQFAERVLRDGLQAVEVHEGETFRFGHRAEAGID 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + G + GF  V   E    +   VSSS IRT ++ G +  A  LLG  F+I S    
Sbjct: 138 SLSQIGRELGF-LVRAYEPYILRGAAVSSSRIRTLVSTGELPQARALLGRSFSIHSTPAS 196

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVY--AIRFRTQDQTS-YSGVANFGRNPTMVPNGP 255
           G   G     PT N+    D+L   GVY   +R  T DQ   + GV N G  PT   +  
Sbjct: 197 GRGYGTRYTVPTVNLAPYGDLLPAHGVYITTLRVGTGDQARVFRGVTNAGNRPTFGADS- 255

Query: 256 LLLESFIFDFSQEIYGQRCTV--SFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             +E+ + DF      +   +  +F   LR E +F + E L+  +G D ++A++
Sbjct: 256 FAVETHLLDFEPIDLDETSPLEMTFLYRLRGEQRFPNPEALRAQIGLDVRRAQR 309


>gi|332366479|gb|EGJ44227.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1059]
          Length = 310

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 144/305 (47%), Gaps = 17/305 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           I++   +  +  V+ +G FDG+H GH  + E+A +IA      I V++F   P+      
Sbjct: 8   IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPESPKLAFVRY 67

Query: 67  SPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            P   L   S +E++  LE +G   L    FT   A  +A  F +K  V  L  K V+ G
Sbjct: 68  QPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEK-YVSRLRAKAVVAG 126

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             + FG DR       ++  E   F    + I    N  ++ +SS+ IR  +  G +L  
Sbjct: 127 FDYHFGSDR-------KESHELRDFFNGKIVIVPSVNLDNRKISSTRIRETIAAGDMLKT 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGV 241
             LLGY  +    V+HG   GRT+G+PTAN+  L    L  +GVY        Q  Y G+
Sbjct: 180 QELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ-RYRGM 238

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G+N T      L  E  IFDFSQ+IYG    + +   +R  +KF  I+ L   +  D
Sbjct: 239 ASVGKNVTF-DGDELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFDSIDSLIAQLQSD 297

Query: 302 EKKAR 306
           E+ AR
Sbjct: 298 ERIAR 302


>gi|15900977|ref|NP_345581.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae TIGR4]
 gi|111658015|ref|ZP_01408719.1| hypothetical protein SpneT_02000812 [Streptococcus pneumoniae
           TIGR4]
 gi|14972585|gb|AAK75221.1| macrolide-efflux protein [Streptococcus pneumoniae TIGR4]
          Length = 305

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +     +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKNYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|75764627|ref|ZP_00744067.1| Riboflavin kinase / FMN adenylyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74487884|gb|EAO51660.1| Riboflavin kinase  / FMN adenylyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 269

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 142/265 (53%), Gaps = 11/265 (4%)

Query: 53  LSFNPHPRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           ++F+PHP  ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   
Sbjct: 1   MTFHPHPSGVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDY 60

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           ++  L VK V+ G  + +G+   G    L    RGE   F    I+++   + + VSS+ 
Sbjct: 61  II-GLNVKHVVAGFDYSYGRLGKGKMETLPFHARGE---FTQTVIEKVEFQEEK-VSSTA 115

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAI 228
           +R  +  G +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+
Sbjct: 116 LRKLIRNGEMEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAV 175

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           R +  D+  Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E K
Sbjct: 176 RLKVHDEW-YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKK 234

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  I++L   + +D+K A++   S 
Sbjct: 235 FNGIDELVEQIAKDKKTAQEYFASE 259


>gi|306829617|ref|ZP_07462807.1| riboflavin biosynthesis protein RibF [Streptococcus mitis ATCC
           6249]
 gi|304428703|gb|EFM31793.1| riboflavin biosynthesis protein RibF [Streptococcus mitis ATCC
           6249]
          Length = 308

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKKTA 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +     + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 139 VDL----KDYFDGEIIIVPPVEDEKGKI-SSTRIRKAILDGDVKEVNHLLGTPLPTRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  I++L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSIDELVDQLQKDEEIAR 302


>gi|302537268|ref|ZP_07289610.1| riboflavin biosynthesis protein RibF [Streptomyces sp. C]
 gi|302446163|gb|EFL17979.1| riboflavin biosynthesis protein RibF [Streptomyces sp. C]
          Length = 313

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 6/223 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PHP  +++  S 
Sbjct: 8   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVAKARELGVPAVVVTFSPHPSEVVRPGSH 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  AL+   FT E +  S   FI KVLV+ L  + VI G  FR
Sbjct: 68  PPILAPYDRRAELMAGLGVDALLILPFTAEFSQLSPADFIVKVLVDKLHARAVIEGPNFR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ---IVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L++ G  Y +    +D +   ++      SS+  R  + +G +  AA +
Sbjct: 128 FGHRAAGNVDFLRELGSTYDYEVDVVDLVERGEAGGGVPFSSTLARKLVAEGDMDGAAEI 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYA 227
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA
Sbjct: 188 LGRPHRVEGIVVRGAQRGRELGYPTANVETQPHTAIPADGVYA 230


>gi|270292632|ref|ZP_06198843.1| macrolide-efflux protein MreA/riboflavin biosynthesis protein RibF
           [Streptococcus sp. M143]
 gi|270278611|gb|EFA24457.1| macrolide-efflux protein MreA/riboflavin biosynthesis protein RibF
           [Streptococcus sp. M143]
          Length = 308

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     ++ L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYIKALKPAIIVAGFDYTFGSDKKTA 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +     + +    + +  + + K +I SS+ IR A+  G V    HLLG        V
Sbjct: 139 DDL----KDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVKEVNHLLGTPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RKRYRGMASVGKNVTFYGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVIVYWLDRVRDMVKFDSVEELVDQLQKDEEIAR 302


>gi|301165484|emb|CBW25055.1| riboflavin biosynthesis protein RibC [Bacteriovorax marinus SJ]
          Length = 307

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 147/291 (50%), Gaps = 12/291 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+H+GH  I+++  ++ +   +   ++SFNPHP  I+      F ++    +E
Sbjct: 17  VTIGNFDGVHVGHQSIIKEIKEVCSQEDLAFVLISFNPHPLRILNPKEN-FLINTYDEKE 75

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ++ ++G    +   F  + +      F+   ++    + ++  G  F FG ++AG+  I
Sbjct: 76  VLISELGVDYFLEIPFDRDLSTMEPSLFLDNYILVNKNIHSLYMGHDFAFGANKAGNF-I 134

Query: 140 LQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             K   K     V +++++  N   + VSSS +R  +  G V     LLG  F +  +++
Sbjct: 135 FAKDYCK----GVNVEKMKRFNPNEETVSSSVVRKLIESGDVDKVRDLLGRNFFLTGNIV 190

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G   G+ +GFPTAN+  + + I  K GVY      +    +S + N G NPT V  G  
Sbjct: 191 KGAGRGKQIGFPTANISYNSERITPKVGVYITTVEIRGMVYFS-ITNIGFNPTFVDEGKK 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +E+ IFDF ++IYG+   VSF   +R E KF  + +L   +  D  +A+K
Sbjct: 250 TVETNIFDFDEDIYGEDLKVSFIKRIRDEKKFNSVNELVDQIKSDVDEAKK 300


>gi|258648269|ref|ZP_05735738.1| riboflavin biosynthesis protein RibF [Prevotella tannerae ATCC
           51259]
 gi|260852185|gb|EEX72054.1| riboflavin biosynthesis protein RibF [Prevotella tannerae ATCC
           51259]
          Length = 320

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 10/295 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  +G FDG+HLGH  +L+Q    A         ++F+ HPR ++  S     L+    +
Sbjct: 24  VATVGFFDGVHLGHRYLLKQVRDEARRRGGWAMAITFSVHPRRVLDVSYRPQMLTTTEEK 83

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + + G        FT   A   A+ F+Q  L + L V  ++ G    FG DR     
Sbjct: 84  LGFIAESGMDCCTILDFTPALAKLPAKDFMQYFLRDKLGVSVLLMGYDHHFGSDRLVGLA 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             +  G   G   V   E   N    +SSS IR  L  G++      LG R+ ++  V+ 
Sbjct: 144 PYKALGASLGIE-VLKAEAYKNDDLTLSSSLIRRCLEAGNIACVNSSLGRRYDLKGHVVE 202

Query: 199 GEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           G  IGR LGFPTAN++  PD     L   GVYA+    + +T Y  + N G  PT+    
Sbjct: 203 GHHIGRDLGFPTANLE--PDDPQKCLPGRGVYAVFAEIRGKT-YPAMLNIGFRPTLNDGN 259

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + +E+ +F F    YG+  T+SF   LR E +F  +E L+  + +D      IL
Sbjct: 260 KVTIETHLFGFEGNAYGEALTLSFVHRLRDEQRFDSLETLRHQLQQDADNTLHIL 314


>gi|256824996|ref|YP_003148956.1| FMN adenylyltransferase /riboflavin kinase [Kytococcus sedentarius
           DSM 20547]
 gi|256688389|gb|ACV06191.1| FMN adenylyltransferase /riboflavin kinase [Kytococcus sedentarius
           DSM 20547]
          Length = 290

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 15/292 (5%)

Query: 30  IHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQEKI--LEKM 85
           +H GH  +L + +  A +  +   VL+F+PHP  ++        +   S+++++  LE+ 
Sbjct: 1   MHRGHRAVLARLVDEARSHDLASIVLTFHPHPLEVLHPERAPEAIC--SLEQRLEHLERA 58

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   ++   FT E A  S  +F+ +  V    ++ ++ G   RFG+  AG    L++ GE
Sbjct: 59  GVDVVVAQAFTHELAAQSPREFVTETYVRNFGMRRIVVGRDSRFGRHNAGTVDTLRELGE 118

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
           + GF  V ++++ +  +   SS+ +RTAL +G +  A+  LG    +   V+HGE+ GR 
Sbjct: 119 ELGFDVVVLEDVGDPATTRWSSTAVRTALGQGRIDAASEHLGRPHCVRGTVVHGERRGRE 178

Query: 206 LGFPTANMQLSPDILL-KEGVYA---IRFRTQD---QTSYSGVANFGRNPTMVPNGPLLL 258
           LGFPTAN+    + ++  +GVYA   +R    +   +       + G NPT   +    +
Sbjct: 179 LGFPTANLSADAEGMVPADGVYAGWLVRDTLPEGDPERRQPAAISVGSNPTFDAHR-RTV 237

Query: 259 ESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E+ + D +  ++YG+  T+ F + LR  ++++ IE L   M  D   AR++L
Sbjct: 238 EAHVLDRTDLDLYGEPVTIEFVERLRGMVRYEGIEPLIEQMRADVSAAREVL 289


>gi|240171313|ref|ZP_04749972.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium kansasii ATCC 12478]
          Length = 324

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 21/318 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
              +P      V+ +G FDG+H GH  ++  A+K       P  +++F+PHP  ++   S
Sbjct: 7   QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRTRGVPTVLMTFDPHPMEVVYPGS 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+  + + +++E++G    +   FT +    + +++I ++LVE L V  V+ G  F
Sbjct: 67  HPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYIHELLVEHLHVVEVVVGENF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            FGK  AG+   L++ GE++GF       + E  ++++   SS+ IR+ +  G V+ A  
Sbjct: 127 TFGKKAAGNVHTLRRAGERFGFAVEAMSLVSEHHSHETVTFSSTYIRSCVDAGDVMAATE 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS---- 237
            LG    +E  V+ G   G  LGFPTAN  ++P +   +  +GVYA  F           
Sbjct: 187 ALGRPHRVEGVVVRGYGRGAELGFPTAN--IAPPMYSAIPADGVYAAWFTVLGHGPATGA 244

Query: 238 ------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + KF+ +
Sbjct: 245 VIPGERYQAAVSIGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVARIRGQKKFESV 303

Query: 292 EKLKIYMGEDEKKARKIL 309
             L   +  D ++ R +L
Sbjct: 304 RDLVAEIAADTERTRALL 321


>gi|307706716|ref|ZP_07643521.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK321]
 gi|307617801|gb|EFN96963.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK321]
          Length = 311

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   S +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYKPELMLHIVSHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                   + +    + +  + + K +I SS+ IR A+  G V  A  LLG        V
Sbjct: 137 --TADDLKDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVREAGQLLGTPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQ-RKRYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +++L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVIVYWLDRVREMVKFDSVDELVDQLQKDEEIAR 302


>gi|323340005|ref|ZP_08080271.1| riboflavin biosynthesis protein RibF [Lactobacillus ruminis ATCC
           25644]
 gi|323092511|gb|EFZ35117.1| riboflavin biosynthesis protein RibF [Lactobacillus ruminis ATCC
           25644]
          Length = 320

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 14/300 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII--QSSSPIFTLSPPS 76
           V+ +G FDG+H GH  ++ +  + A    + + +++ + +P  +   +++     LS   
Sbjct: 22  VLCLGFFDGVHRGHQAVIREGKRRAEKIGAKLAIMTLDRYPGIVFNNEANKDFAYLSSER 81

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK---DR 133
            + ++ E+ G        F  +    S + F++K +V  L     + G+ + +GK     
Sbjct: 82  KKLELFERFGVDLCYVVSFDEKFYTLSQQDFVEKYIVS-LHAVCAVAGSDYTYGKMPYAN 140

Query: 134 AGDRGILQKRGEKYG-FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            GD   L+  G   G F  V +  + ++  +I SS+ IR AL KG+V  AA LLGY +  
Sbjct: 141 GGDMSHLE--GYANGRFEVVKVSHMLDDGEKI-SSTRIRKALRKGNVKMAADLLGYSYET 197

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTM 250
              V+HG + GR LGFPT N++   P ++  EGVYA+  R + ++  Y G+A+ GRN T 
Sbjct: 198 SGQVVHGFERGRKLGFPTLNLETKEPVMIPSEGVYAVFVRFEGEEKRYMGMASIGRNETF 257

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +    +E  + DFS  +YG+   V + + LR   KF   + L   +  D+++ RKILE
Sbjct: 258 GNHFEKTIEINLLDFSDMVYGKNVFVEWIELLRGMKKFSGAKDLIEQLNHDKERTRKILE 317


>gi|270289177|ref|ZP_06195479.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Weiss]
          Length = 298

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 143/287 (49%), Gaps = 12/287 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDG HLGH  +L    +    S   V++F+ HP+  + S+SP  T++  S++E+I
Sbjct: 20  ITIGFFDGCHLGHQALLSSLKQFPGKS--GVITFSEHPKHTL-SNSPPETIT--SLEERI 74

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L       L    F  E AN  AE FI   L E L    +I G   R G+   G+   
Sbjct: 75  QLLTNCHIDYLAILPFNQEIANEEAEMFILS-LYESLHPSRIIFGYDSRLGRGGLGNAQT 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G     I  L  N + IVSS  IR  L +G +L+A   LG  F+    V  G
Sbjct: 134 LKPFASSLGISLEEIPPLSINGT-IVSSRKIRQFLREGDLLSAEKFLGRPFSYTGTVTRG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IG +LG+ T N+ L+   LL  GVY+   +   + SY GV N G  PT+  N  L LE
Sbjct: 193 QGIGSSLGYATINLNLTRS-LLPLGVYSCSIKI-GRESYLGVMNLGMAPTVQRN-QLCLE 249

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + I D S ++Y QR TV    +LR E  F   ++L + + ED +KAR
Sbjct: 250 AHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKAR 296


>gi|160932913|ref|ZP_02080302.1| hypothetical protein CLOLEP_01754 [Clostridium leptum DSM 753]
 gi|156867987|gb|EDO61359.1| hypothetical protein CLOLEP_01754 [Clostridium leptum DSM 753]
          Length = 317

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 152/313 (48%), Gaps = 13/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHP 59
           M VF+ +E  Q      +   VA+G FDG+H GH  ++ +A+ + AN    +V +F   P
Sbjct: 2   MQVFNGLEKAQ------RPAAVALGCFDGLHKGHQAVIRKAVTEKANGLVPSVFTFPESP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              +        +S  +++EK+LE +G  AL    F     +   E F++++L   L  +
Sbjct: 56  LAELTGRGKPRLMSN-TLKEKMLEDLGVEALYLAPFA-AVKDLPPEAFVEEILKNTLRAE 113

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  + FG      +  L+      G     +  +   +   VSS+ IR AL KG  
Sbjct: 114 KVFCGYNYHFGAGGTAGKEELKALCRPRGIQVCDLPPV-TLEGAPVSSTRIRKALEKGGA 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSY 238
             A  LLG+ F+ + +V+HG  IG  +G PT N     D L+ + GVYA    + DQ   
Sbjct: 173 RQARELLGHPFSYDFEVVHGRHIGHLMGTPTLNQVFPEDYLVPRYGVYA-SLVSFDQVVT 231

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQE-IYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GV N G  PT+      L E+++ D+  E +YG+       +++RPE +F  +E+L+  
Sbjct: 232 YGVTNIGVKPTVGAEEKPLSETWMPDYDGEALYGKMVKTELLEFIRPEKRFGGLEELRAM 291

Query: 298 MGEDEKKARKILE 310
           + ++ ++AR I E
Sbjct: 292 ILKNGEQARGIAE 304


>gi|225856750|ref|YP_002738261.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae P1031]
 gi|225724451|gb|ACO20303.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           P1031]
          Length = 305

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GR +G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRIIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 252 ARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTR 302


>gi|257784629|ref|YP_003179846.1| riboflavin biosynthesis protein RibF [Atopobium parvulum DSM 20469]
 gi|257473136|gb|ACV51255.1| riboflavin biosynthesis protein RibF [Atopobium parvulum DSM 20469]
          Length = 345

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 142/299 (47%), Gaps = 7/299 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  +G FDG+H GH  +L  A K A     P+  ++F P P  ++   SP   LS    +
Sbjct: 41  VCVLGVFDGLHEGHQGLLAIAKKDAEARKVPLVAVTFLPDPVEVLFDGSPQRLLSGED-R 99

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G   ++ + FT E A  S  Q+++  L+  +   +V  G+ F  G   A    
Sbjct: 100 LRALAAWGVDGILVHHFTREFAALSGTQYVESKLLPCVPAVSVHVGSDFGLGAQGAEGSA 159

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L   G ++GF  V   EL  +  + +S++ IR  L +G V +AA LLG    +   V H
Sbjct: 160 LLAALGRQHGFE-VHAHELFCSGGEKISATRIRNLLGQGRVEDAASLLGRWHFVSGVVKH 218

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   G   GFPTAN+ L   D + ++GVYA  +     T++    N G+ P+       L
Sbjct: 219 GRGQGTGFGFPTANVALDVRDCIPQDGVYAC-YVVHGATAWPAAVNVGKAPSFESQTGPL 277

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM-GEDEKKARKILESSYPL 315
           LE+ +  FS  +YG +    F   LR   KF  ++ LK  + G  +  A+ +  +SY L
Sbjct: 278 LEANLLGFSGNLYGSQVQTVFVKRLRESKKFDSLQDLKQAVRGNIDWVAQNLGTTSYNL 336


>gi|304383298|ref|ZP_07365764.1| riboflavin biosynthesis protein RibF [Prevotella marshii DSM 16973]
 gi|304335466|gb|EFM01730.1| riboflavin biosynthesis protein RibF [Prevotella marshii DSM 16973]
          Length = 310

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 15/312 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ 64
           I  N+ +P   +  +  IG FDG+H GH  ++++  + A+   +   V++F+ HPR ++ 
Sbjct: 4   IHFNEQMPPQTRPAMATIGFFDGVHTGHRFLIDELARQAHAEKMDAMVVTFDRHPREVLH 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           S      LS    + +++            FT E A  SA  F++ VL + L VK +  G
Sbjct: 64  SDYQPRLLSSLDEKLELMTHTEADTCAVLAFTPEMAARSAFDFMRTVLRDKLCVKRLFIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----VSSSNIRTALTKGHVL 180
              RFG +R+         G +     + ID   +    +    VSSS IR+ L +G V+
Sbjct: 124 YDNRFGHNRSEGFADYLAYGRR-----LHIDVKESTAFTLGDIRVSSSAIRSLLNEGDVI 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQD-QTS 237
            +   LGY +T+   V+ G + GR +GFPTAN+    +  ++  +GVYA+    +    +
Sbjct: 179 TSNRCLGYAYTLSGTVVGGFREGRKIGFPTANLHPFDARKLIPHDGVYAVEATVEGFDRA 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              + N GR PT   +    LE  I DF  +IY ++ +V+F   LR E  F D   L   
Sbjct: 239 MPAMMNIGRRPT-YGSFDRSLEVHILDFHADIYDRKMSVAFVQRLRDEQTFADPAALAAQ 297

Query: 298 MGEDEKKARKIL 309
           +  DE   R +L
Sbjct: 298 LTRDEAATRALL 309


>gi|28378664|ref|NP_785556.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|28271500|emb|CAD64405.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
          Length = 333

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 15/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++  A + A        V++F+ HP  + + + P       +I 
Sbjct: 21  VLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQHPSVVFKHTDPQQVRYLTTID 80

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +K  ++ ++G   L    F         + F+ +++V  L  +TV+ G  + +G     +
Sbjct: 81  QKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIVG-LHAQTVVAGFDYTYGPAEIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                +R   YG +   I E+   +  ++ +SS+ IR AL  G +  A  LLGY++    
Sbjct: 140 ----MQRLNDYGHNRFEIIEVPKAELDAEKISSTRIRRALDAGDIDTANRLLGYQYETAG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY-SGVANFGRNPTMVP 252
           +V+HGE  GRTLGFPTAN+   P+  +   G+YA     Q  T +  G+A+ GRN T   
Sbjct: 196 EVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYAT--MVQIGTRWVMGMASVGRNVTFGD 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + P+ +E ++ DF  ++YG   TV +   +R EIKF   + L   +  DE+  R
Sbjct: 254 HRPITVEIYLLDFRGDLYGHNLTVRWGHRMRGEIKFAGADALVAQLKRDEQNTR 307


>gi|253584369|ref|ZP_04861567.1| riboflavin kinase [Fusobacterium varium ATCC 27725]
 gi|251834941|gb|EES63504.1| riboflavin kinase [Fusobacterium varium ATCC 27725]
          Length = 273

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 138/258 (53%), Gaps = 12/258 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAIG FDGIH GH  ++E A++ A  N     V +F  HP  II +S     ++  +++E
Sbjct: 19  VAIGTFDGIHYGHQQLIEAAVEKAKENKGVSVVFTFANHPMEIIDASKTPKCIN--TLEE 76

Query: 80  KI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           KI  LE MG   LI   F  + A+ +A +F++ +L + ++ K +  G  F FG+      
Sbjct: 77  KIYILENMGIDYLILQPFNKKFADLTAIEFVE-ILKKDVDTKEIFVGFNFSFGEGGKAKT 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L + G+        I  +  +K QI+SS+ IR ++  G        LG++F I  +VI
Sbjct: 136 KDLIEIGKSMEIKVNEIPAVILDK-QIISSTLIRKSIQHGEFEKVNKYLGHQFLIIGEVI 194

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           HG+KI R LGFPTAN++LS  +    G+Y   ++   +D   Y GV N G NPT+ P G 
Sbjct: 195 HGKKIARQLGFPTANIKLSNRLYPPFGIYGAMVKIEGEDIERY-GVVNIGVNPTLKP-GE 252

Query: 256 LLLESFIFDFSQEIYGQR 273
             +E  I DF  +IY ++
Sbjct: 253 RSVEVHILDFDGDIYREK 270


>gi|254556862|ref|YP_003063279.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
 gi|254045789|gb|ACT62582.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
          Length = 333

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 15/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++  A + A        V++F+ HP  + + + P       +I 
Sbjct: 21  VLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQHPSVVFKHTDPQQVRYLTTID 80

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +K  ++ ++G   L    F         + F+ +++V  L  +TV+ G  + +G     +
Sbjct: 81  QKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIVG-LHAQTVVAGFDYTYGPAEIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                +R   YG +   I E+   +  ++ +SS+ IR AL  G +  A  LLGY++    
Sbjct: 140 ----MQRLNDYGHNRFEIIEVPKAELDAEKISSTRIRRALDAGDIDTANRLLGYQYETAG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY-SGVANFGRNPTMVP 252
           +V+HGE  GRTLGFPTAN+   P+  +   G+YA     Q  T +  G+A+ GRN T   
Sbjct: 196 EVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYAT--MVQIGTRWVMGMASVGRNVTFGD 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + P+ +E ++ DF  ++YG   TV +   +R EIKF   + L   +  DE+  R
Sbjct: 254 HRPITVEIYLLDFRGDLYGHNLTVRWGHRMRGEIKFAGADALVAQLKRDEQNTR 307


>gi|15834987|ref|NP_296746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Nigg]
 gi|270285156|ref|ZP_06194550.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Nigg]
 gi|301336551|ref|ZP_07224753.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum MopnTet14]
 gi|8163211|gb|AAF73550.1| riboflavin kinase/FMN adenylyltransferase [Chlamydia muridarum
           Nigg]
          Length = 295

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 143/287 (49%), Gaps = 12/287 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDG HLGH  +L    +    S   V++F+ HP+  + S+SP  T++  S++E+I
Sbjct: 17  ITIGFFDGCHLGHQALLSSLKQFPGKS--GVITFSEHPKHTL-SNSPPETIT--SLEERI 71

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L       L    F  E AN  AE FI   L E L    +I G   R G+   G+   
Sbjct: 72  QLLTNCHIDYLAILPFNQEIANEEAEMFILS-LYESLHPSRIIFGYDSRLGRGGLGNAQT 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G     I  L  N + IVSS  IR  L +G +L+A   LG  F+    V  G
Sbjct: 131 LKPFASSLGISLEEIPPLSINGT-IVSSRKIRQFLREGDLLSAEKFLGRPFSYTGTVTRG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IG +LG+ T N+ L+   LL  GVY+   +   + SY GV N G  PT+  N  L LE
Sbjct: 190 QGIGSSLGYATINLNLTRS-LLPLGVYSCSIKI-GRESYLGVMNLGMAPTVQRN-QLCLE 246

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + I D S ++Y QR TV    +LR E  F   ++L + + ED +KAR
Sbjct: 247 AHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQEDIRKAR 293


>gi|315613274|ref|ZP_07888183.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis ATCC
           49296]
 gi|315314509|gb|EFU62552.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis ATCC
           49296]
          Length = 316

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ +G FDGIH GH  + E A K +     P+ V++F   P+  +Q   P   L   + +
Sbjct: 20  VLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIVNHE 79

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           E+   ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+   
Sbjct: 80  EREHKMKWHGVEALFLLDFSSKFASLTGQEFFD-TYVRALKPAIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                   + +    + +  + + K +I SS+ IR A+  G V     LLG        V
Sbjct: 137 --TADDLKDYFDGEIIIVPPVEDEKGKI-SSTRIRQAILDGDVREVNQLLGTPLPTRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y G+A+ G+N T     P
Sbjct: 194 VHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQRQ-RYRGMASVGKNVTFDGEEP 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR
Sbjct: 253 -RFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIAR 302


>gi|322436419|ref|YP_004218631.1| riboflavin biosynthesis protein RibF [Acidobacterium sp. MP5ACTX9]
 gi|321164146|gb|ADW69851.1| riboflavin biosynthesis protein RibF [Acidobacterium sp. MP5ACTX9]
          Length = 324

 Score =  125 bits (315), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 12/303 (3%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           LP  L   V  IGNFDG+H GH  +++Q    A     P  +++F+PHP  +++  +P  
Sbjct: 10  LPADLGPVVATIGNFDGVHRGHRWVIDQVNARARTLCLPSLLITFDPHPVRVLRPDAPHS 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++P   +  +L + G  A +   FT E +  +A QF + +L   + V+ V  G  FRFG
Sbjct: 70  LITPLEQKLALLGETGIDAALILPFTPELSRLTARQFAE-ILANDIHVREVHEGENFRFG 128

Query: 131 -KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
            K  AG  G L++ G + GF T         ++  VSSS IR  +  G + +A  L G  
Sbjct: 129 HKAEAGMEG-LEQLGHELGF-TAQTYSPHILRAAPVSSSRIRNLIAAGALHHARALTGRP 186

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTSYSGVANFGR 246
           F I+S    G   G     PT N+   P++L  +GVY    +        +++ V N G 
Sbjct: 187 FAIQSTPASGRGYGTRYTVPTINLAPYPELLPAKGVYVTTLKVGTGPHAETFNAVTNIGD 246

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCT--VSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            PT   +    +ES + +F      ++    ++F   LRPEI++ + E L+  +G D KK
Sbjct: 247 RPTFGADS-FAVESHLLNFHAVDLNEQTPLELTFLQRLRPEIRWPNPEALRTQIGLDVKK 305

Query: 305 ARK 307
           A++
Sbjct: 306 AQR 308


>gi|290969154|ref|ZP_06560679.1| riboflavin biosynthesis protein RibF [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780660|gb|EFD93263.1| riboflavin biosynthesis protein RibF [Megasphaera genomosp. type_1
           str. 28L]
          Length = 320

 Score =  125 bits (315), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 13/326 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M VFH+  EI           VVA+G FDG+H+GH  ++  A+  A   +    V++F+ 
Sbjct: 1   MEVFHSFQEITGC-----HAAVVALGTFDGVHMGHRAVMRAAMAEAKKLHRKAAVVTFSA 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP +++        L+  + + + +  +G   L+    T E    +   F ++ L E   
Sbjct: 56  HPLSVLHPEKEPLRLATTAQKIQYIADVGVDVLVLLPMTKELMAETPTAFCRQ-LQETFC 114

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTALTK 176
              ++ G  F +G    G+   L    +K+      +  + + +  + +SS+ IR  +  
Sbjct: 115 PAAIVVGENFTYGAGAGGNTETLAAYMKKHRTPVQVLPLVPDPQGLEPISSTKIRQLIAC 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G+V  A  LLG  F +   V  G++ GRT+GFPTAN+ L+P + +  +GVY      Q Q
Sbjct: 175 GNVEEAGRLLGRPFAMTGTVADGDRRGRTIGFPTANLHLAPHMAVPADGVYITEVSRQGQ 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + N G NPT        +E+ I D+ ++IYGQ  TVSF   +R E +F  +  L 
Sbjct: 235 -WLPAMTNVGANPTFT-RQYRRVETHILDWHEDIYGQDITVSFLRRIREEKQFPTVAALI 292

Query: 296 IYMGEDEKKARKILESSYPLSERDRI 321
             M +D++  R+   +   L + + +
Sbjct: 293 TQMQQDKEVVRQYFLTRQALQDLETV 318


>gi|300854505|ref|YP_003779489.1| bifunctional enzyme FAD synthetase /riboflavin kinase [Clostridium
           ljungdahlii DSM 13528]
 gi|300434620|gb|ADK14387.1| bifunctional enzyme FAD synthetase /riboflavin kinase [Clostridium
           ljungdahlii DSM 13528]
          Length = 312

 Score =  125 bits (315), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 8/294 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSS-SPIFTLSP 74
           K   +A+G+FDG+HLGH  ++ + +K+A N+     V +F  HP +II    SP   ++ 
Sbjct: 14  KSTYIALGSFDGLHLGHINLINKTVKLARNNKANSMVFTFKNHPLSIINPEVSPKILMNN 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S +  +L+  G   +    F  E      E F+  +L  +   K +I G  +RFG    
Sbjct: 74  ES-KINVLKDAGLDIINMANFNEEFMKICPEDFVIHLLNNY-RAKGLIVGFNYRFGYKNL 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L+K  + + F    ID ++     + SS        +G +  A  LL   F ++ 
Sbjct: 132 GDVSLLKKMSKIHKFSLNVIDSVKYKGQVVSSSIIRTIISDEGDIKKANKLLTRPFMLQG 191

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           +VIHG+++GR LGFPT N+      ++ K GVY       +   + G+ N G NPT   N
Sbjct: 192 EVIHGKQLGRKLGFPTVNLDYDKRFVIPKGGVYYTIVECNNDL-FKGITNVGYNPTTCDN 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             L +E+ I +F++ +Y +   + F + +R E KF  + +L   + +D+  A K
Sbjct: 251 -KLSIETHILNFNENMYDKNIKIYFIERIRDESKFGSLTELADQLKKDKMYASK 303


>gi|293400610|ref|ZP_06644755.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291305636|gb|EFE46880.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 310

 Score =  125 bits (315), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 9/288 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             IG FDG+HLGH  ++++ ++IA  +     +++F+P P  +++    I  ++P   ++
Sbjct: 20  ACIGYFDGLHLGHQQLVKRVLEIAEKTHTIPALITFDPDPWVVLKKLHNIPHITPMKHRQ 79

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            I  K+G    I   F  + A  S EQF + VL   L ++T++ G  F +     G    
Sbjct: 80  DIGAKLGIQKWIILDFQKDMAQLSYEQFHELVLKP-LHIETLVCGYDFHYANRGEGSVKT 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ    ++ F    ++E+ +   +I SS+ I  ++ +G +   A ++G  + +   V  G
Sbjct: 139 LQA---QHFFKVEVVEEIASANEKI-SSTRIEQSIKRGEMEETADIMGRFYEMRGIVKSG 194

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            ++GR  GFPTAN++   + I+ K+GVY       D T +  + N G NP+        +
Sbjct: 195 NRVGRKYGFPTANLKTQGEYIMPKQGVYIGSVFVLD-TWWMAIINVGHNPSFNYQQNTSI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           E+++ DF + IY +  T  F  +LR E KF  +++LK  + +D  +AR
Sbjct: 254 EAYLLDFDKMIYDKTVTFRFHRFLREEQKFAGMQELKEQLLKDCDRAR 301


>gi|218282373|ref|ZP_03488655.1| hypothetical protein EUBIFOR_01237 [Eubacterium biforme DSM 3989]
 gi|218216659|gb|EEC90197.1| hypothetical protein EUBIFOR_01237 [Eubacterium biforme DSM 3989]
          Length = 330

 Score =  125 bits (314), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 12/302 (3%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPI 69
           ++P  L      IG FDG+H GH  +L+  I  A    +   +++F+P P  I       
Sbjct: 12  NVPKDLLKSSCCIGFFDGLHTGHQALLDNCILKAKELGVQSGLITFDPDPWKIFFPDRVC 71

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    +  +   MG   +    F+ + A    + F   +L++ + V  +  G  F++
Sbjct: 72  RHITTLEDRIHLASAMGIEVMYVITFSKDFAALDVDAF--HLLLQKMNVCHITCGFDFKY 129

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
               +G+   LQ +     F+   ID + N+K++ +SSS I   +  G +  A  LLGY 
Sbjct: 130 ASKNSGNVHTLQNQDY---FNVSVIDSV-NSKNEKISSSRIEPLIQSGKIDLANELLGYM 185

Query: 190 FTIESDVIHGEKIGRTL-GFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           ++IE  + HG K G TL  FPTAN+  + D L+   GVYA  F   + T Y  + N G N
Sbjct: 186 YSIEGIIEHGFKRGSTLLKFPTANLGANADYLVPSSGVYA-GFVCVNDTFYGAMINVGNN 244

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT   N  + +E+ IFDF Q+IY QR    F    R EI+F   E+LK  +  D    +K
Sbjct: 245 PTF-ENKKVSIEAHIFDFDQDIYDQRVRFFFLKKTRNEIRFNGFEELKKQLESDIITCKK 303

Query: 308 IL 309
           ++
Sbjct: 304 VI 305


>gi|331701352|ref|YP_004398311.1| riboflavin biosynthesis protein RibF [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128695|gb|AEB73248.1| riboflavin biosynthesis protein RibF [Lactobacillus buchneri NRRL
           B-30929]
          Length = 318

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 146/297 (49%), Gaps = 13/297 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSP----IFTLSP 74
           VVA+G FDG H GH  +L++A   A    + + VL+++ HP  + +  SP      TL+ 
Sbjct: 21  VVAMGFFDGFHKGHQAVLQRAKTEAEKRGAKLAVLTYDHHPAIVYRKMSPHEQRYLTLND 80

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             +Q  +L   G   +    ++ +  + + E+FI   L  +  V  V+ G    +G  + 
Sbjct: 81  YKMQ--LLRDFGVDQVFLVNYSYDFQSQTPEEFINNFLKRFNAV-AVVAGFDHTYGDKKV 137

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  K   K  F  + +  +  N  + VSS+ IR  L  G V +   LLG  F    
Sbjct: 138 ATMANFPKF-VKGAFDVITVPSVDINDKK-VSSTRIRIELDSGDVDSVTKLLGRPFQTRG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            ++HGE+ GR LG+PTAN++ S    L   G+Y +     D+  Y G+A+ G+N T    
Sbjct: 196 VIVHGEERGRLLGYPTANVEHSEYQWLPTIGIYVVTVEIADK-KYLGMASIGKNVTFSDV 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P+ +E  + DF + IYG+   V++  YLR EIKF+  E L   + +D+   R+ LE
Sbjct: 255 HPMTVEINLMDFDRNIYGEVVNVNWLSYLRAEIKFQTPEDLIDQLDKDKVATREYLE 311


>gi|329769821|ref|ZP_08261222.1| riboflavin biosynthesis protein RibF [Gemella sanguinis M325]
 gi|328838183|gb|EGF87801.1| riboflavin biosynthesis protein RibF [Gemella sanguinis M325]
          Length = 305

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 160/300 (53%), Gaps = 15/300 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHP 59
           M +F+  +IN+ +    K  + A+G FDG+H  H  I++ AI  + N  ++ V++F+  P
Sbjct: 1   MRIFNISKINE-IEKDSKRRIAALGFFDGLHTAHQEIIKGAIDKSQNDALSIVITFDKSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     ++    ++P + + ++LE++G   +   +F  +    SAE FI ++L + L V+
Sbjct: 60  KEYFGKTTEE-AITPINKKSELLEELGVDEVYYLEFNEKLQTLSAEDFINEIL-KKLNVE 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  +RFG    G   +++  G +     V I E +      +S++ ++ A+ +G+ 
Sbjct: 118 KVFCGYDYRFGNKGIGTPQLIKDSGIE-----VDILEKKELNDGKISTTALKKAVQEGNF 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTS 237
               +L    ++I   V+ G ++GRT+ FPTAN++L    LL +  GVY  + + + +  
Sbjct: 173 TEYYNLSNRYYSITGIVVKGRQLGRTINFPTANLKLDEKYLLPDTNGVYITKTKVKGKV- 231

Query: 238 YSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           Y  + N G NPT V +G     +E+ I DF ++IY ++  V F+++LR E KF+    LK
Sbjct: 232 YKSITNIGYNPT-VSDGKDKKFIETHILDFDEDIYDEKIEVFFYEFLRKEQKFESFNHLK 290


>gi|289522936|ref|ZP_06439790.1| riboflavin biosynthesis protein RibF [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503479|gb|EFD24643.1| riboflavin biosynthesis protein RibF [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 329

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 12/298 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSS--PIFTLSPPS 76
           +V +G+FDG H GH  + E A   ++   +   V++F PHP+ ++ + S  P+FT    S
Sbjct: 8   IVVLGSFDGFHKGHQALFEVARDASDRMDMLWGVMTFVPHPQIVLGNGSFVPLFT---DS 64

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++ I   +     I+  F+ +  + + + FI+++   + + + ++ G  F+FGK R+GD
Sbjct: 65  ERDFIASFLNIPDFIKIPFS-DVKDLNPKDFIEELGSRY-KARGIVVGENFKFGKHRSGD 122

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+    K G+    I   + + S +VSSS +R  + KG++     +LGY + I + V
Sbjct: 123 VEFLKSYLTKKGWFFAAIPPFKIDGS-VVSSSLVRQLVKKGYMQQTEAMLGYPYFIIAPV 181

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
             G+  GR LGFPTAN+  S   +L  +GVYA       +  +SG  N G NPT      
Sbjct: 182 TEGDHRGRILGFPTANLPASELKLLPPKGVYATAVLAHGKW-WSGALNIGYNPTFERGDE 240

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           + +E  +  F  ++YG+   V     +R E KF+  E L   M +D ++ R+I    +
Sbjct: 241 IRIEVHLDQFEGDLYGEMIAVLLLAQIREEKKFESAEGLVAQMKDDVERIREICRPWF 298


>gi|296117683|ref|ZP_06836267.1| riboflavin biosynthesis protein RibF [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295969414|gb|EFG82655.1| riboflavin biosynthesis protein RibF [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 339

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 18/313 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPI 69
           ++P  L    V IG FDG+H GH  ++   +  A    S   +++F+PHP ++       
Sbjct: 9   AVPKDLDNSAVTIGVFDGVHRGHQKLINATVDKARQTGSKAVMVTFDPHPVSVFLPRRAP 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    +  + E  G  A++   FT E +  + E++++ +L + L    ++ G  F F
Sbjct: 69  LGITTLHERFSLAETYGIDAVLVIDFTKELSGTTPEKYVEYLLEDTLHASHIVVGANFTF 128

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++ AG    L+         TV + +L ++    +SS+ +R  L++G+V  A   LG  
Sbjct: 129 GENAAGTADTLKNICAAR--MTVDVIDLLDDDGVRISSTTVREYLSQGNVARANWALGRH 186

Query: 190 FTIESDVIHGE-KIGRTLGFPTANMQLSPDILL-KEGVYA-----------IRFRTQDQT 236
           F++   V+ G  + G+ LGFPTAN      + L  +GVYA           +    + + 
Sbjct: 187 FSVSGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNMEPEI 246

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           +Y+   + G NPT   +    +ESF+ D   ++YG    V F D++R   KF  +E+L  
Sbjct: 247 AYAAAISVGTNPTF-GDEQRSVESFVLDRDADLYGHDVKVEFVDHVRTMEKFDSVEQLLD 305

Query: 297 YMGEDEKKARKIL 309
            M +D  K RKIL
Sbjct: 306 VMAKDVIKTRKIL 318


>gi|172040536|ref|YP_001800251.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium urealyticum DSM 7109]
 gi|171851840|emb|CAQ04816.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           urealyticum DSM 7109]
          Length = 342

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 27/321 (8%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +P++L+G  V IG FDG+H GH  ++ +A+  A     P  + +F+PHP  + Q  S   
Sbjct: 23  VPHNLEGAAVTIGVFDGVHRGHQELINRAVAKAKELGVPAVMFTFDPHPTVVFQPESVPK 82

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L     + ++   +G   ++   FT E A++S E++I + L++ L  K V+ G  F FG
Sbjct: 83  LLGTVEERAQLAMDLGIDHVVVQAFTPEIASWSPEEYIDRALLDTLRAKHVVVGENFTFG 142

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              +G    L++  +   F TV +  L +  +  V S+ IR  + +G +  AA  LG  F
Sbjct: 143 HKASGTPDTLREVSQNRDF-TVDVVPLLSEDNHTVCSTWIRQRIAEGDMTAAAEALGRPF 201

Query: 191 TIESDVIH-GEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRF------------RTQDQ 235
           ++E  V H   + GR LGFPTAN+   PDI  L  +GVYA               R  D+
Sbjct: 202 SVEGVVTHGAGRGGRALGFPTANLYF-PDIYALPSDGVYAGYLEILPNQAELSHQRLSDK 260

Query: 236 TSYSGVA-------NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                V        + G NPT   + P  +ESF+ D   ++Y     VSF   +R + K+
Sbjct: 261 VGTMPVGAKLPAAISVGTNPTF-GHEPRSVESFVLDHEADLYDFEVRVSFVSRIRGQEKY 319

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +++L   +  D    RK +
Sbjct: 320 DSLDELIAAIDRDVAATRKAV 340


>gi|332653579|ref|ZP_08419324.1| riboflavin biosynthesis protein RibF [Ruminococcaceae bacterium
           D16]
 gi|332518725|gb|EGJ48328.1| riboflavin biosynthesis protein RibF [Ruminococcaceae bacterium
           D16]
          Length = 303

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 150/306 (49%), Gaps = 28/306 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS-PIFT------ 71
           V+A+G FDG+H GH  +L    + A   ++     +F+  P   I     P+ +      
Sbjct: 7   VIALGFFDGVHKGHGALLSTVTRRAQELDAAACAFTFDRSPTAAITGQVVPLLSSVEDRV 66

Query: 72  ---LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
               S   IQE I+    F  ++R  +         + FI + L++ L V  V+ G  F 
Sbjct: 67  WLMRSCYGIQEVIVSS--FDGMMRMDW---------QDFITEYLIKQLNVVHVVAGHDFH 115

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG    G+   L++  EK G     I ++   +   +SS+ IRT + +G +  A   LG+
Sbjct: 116 FGYMGKGNPQRLKETCEKLGVGCDIIGKV-EQEGITISSTYIRTLIAQGEMERAVDFLGH 174

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
              + + V HG+KIG + LGFPT N+++ +P I+   GVYA R    D  S+  V N G 
Sbjct: 175 PHVLTNRVTHGKKIGSSSLGFPTVNLRIPAPVIVPAFGVYATRV-VVDGESHMAVTNVGV 233

Query: 247 NPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT+  N G + +E FI DFS ++YG+   + F+ YLR E KF  ++ L   +G + ++ 
Sbjct: 234 RPTVSDNDGRVTVEGFILDFSGDLYGKELRMEFYSYLRGEKKFPSLQALAEEIGRNAQQT 293

Query: 306 RKILES 311
           R    +
Sbjct: 294 RDFFAA 299


>gi|225870411|ref|YP_002746358.1| riboflavin biosynthesis protein [Streptococcus equi subsp. equi
           4047]
 gi|225699815|emb|CAW93644.1| putative riboflavin biosynthesis protein [Streptococcus equi subsp.
           equi 4047]
          Length = 310

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
           H+    EI++S        V+ +G FDG+H GH  + ++A +I+      I  L+F+  P
Sbjct: 5   HIKSYQEIDESADT-----VLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHESP 59

Query: 60  RTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +      SP F   ++ P  + +   + G   L    FT   +  S++ FI   +   L 
Sbjct: 60  QLAFTRFSPDFLRHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHYIGR-LR 118

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           V+ ++ G  + FG D A D   L KR  G  Y    V  D+++      +SS+ IR+ +T
Sbjct: 119 VRHIVVGFDYHFGCDHA-DSHYLAKRIKGTVYSISEVKEDQIK------ISSTRIRSLIT 171

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
            G V  A  LLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY      + 
Sbjct: 172 AGDVAKANQLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVRG 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  Y  + + G+N T      L LE+ IFDF+++IYG+   + + D +R   KF D+   
Sbjct: 232 K-RYRSMTSIGKNITF-GGKELRLEANIFDFNEDIYGETLEIIWLDRIREMNKFSDVSTF 289

Query: 295 KIYMGEDEKKA 305
              + +D++ A
Sbjct: 290 ISQLKQDKEAA 300


>gi|307776578|pdb|3OP1|A Chain A, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
 gi|307776579|pdb|3OP1|B Chain B, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
 gi|307776580|pdb|3OP1|C Chain C, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
          Length = 308

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 139/291 (47%), Gaps = 13/291 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V +FN  P+  ++   P   L    P+
Sbjct: 23  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVXTFNESPKIALEPYHPDLFLHILNPA 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++    K ++ G  + FG D+   
Sbjct: 83  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAXNAKIIVAGFDYTFGSDKK-- 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +     +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 140 --TAEDLKNYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGKLLGAPLPSRGXV 196

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L        +GVY +    Q Q  Y   A+ G+N T      
Sbjct: 197 VHGNARGRTIGYPTANLVLLDRTYXPADGVYVVDVEIQRQ-KYRAXASVGKNVTF-DGEE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R
Sbjct: 255 ARFEVNIFDFNQDIYGETVXVYWLDRIRDXTKFDSVDQLVDQLKADEEVTR 305


>gi|160903128|ref|YP_001568709.1| riboflavin biosynthesis protein RibF [Petrotoga mobilis SJ95]
 gi|160360772|gb|ABX32386.1| riboflavin biosynthesis protein RibF [Petrotoga mobilis SJ95]
          Length = 296

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 24/304 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANN---SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           + IG FDG+H GH  IL+  +++ANN    P+ VL F   P   +     +  + P   +
Sbjct: 4   LTIGIFDGVHKGHQYILKNTLQLANNLRFEPL-VLMFRYPPEKHLGGFEGL--ILPSWRR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++I E +GF   +  K   E      EQ++++++ +   VK ++ G  F FGK+  G+  
Sbjct: 61  KQICEDIGFK--VEVKDLEEVWGLPHEQYLEELMKK--GVKAIVCGEDFTFGKNALGNVE 116

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ   +  G     + +L++  ++ VSSS I+  L  G++  A  +LG  +T+E  V  
Sbjct: 117 YLQAVSQSKGLVVKVLKDLKSQGNR-VSSSAIKRELKLGNIKTANGMLGRPWTLEGTVYE 175

Query: 199 GEKIGRTLGFPTANMQL--SPDILL-KEGVYAIRFRTQDQTSY-SGVANFGRNPTM---- 250
              +G  LGFPTAN+ +    +ILL K GVY ++   + ++ +  G+ N G  PT     
Sbjct: 176 DRHVGFKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYK 235

Query: 251 -VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             P     +E +  DF  ++YG    +   D+LR E+KF + ++L   M +DE +ARKI+
Sbjct: 236 KTPK----VEVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKII 291

Query: 310 ESSY 313
           +  Y
Sbjct: 292 QKHY 295


>gi|268608279|ref|ZP_06142006.1| riboflavin kinase / FMN adenylyltransferase [Ruminococcus
           flavefaciens FD-1]
          Length = 291

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 8/290 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            A+G FDG+HLGH  +L++A+    N       +F+P            F       +  
Sbjct: 8   AALGLFDGVHLGHRAVLKEALAQKQNGLQPCAFTFSPESSA---GKGAKFIYGKAEKEYI 64

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I E      +  + F  +      E F +++L   +    V+ G  FRFG   +     L
Sbjct: 65  IREICLIEEIYSHDFE-DICGMDGETFAKEILCGEMNAAHVVCGKDFRFGTGASCGTDDL 123

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
              G KYGF    ++++     + VSS+ IR  L+ G +  A   LG  + I  +V HG 
Sbjct: 124 AGFGRKYGFTVQTVEDVCLGGER-VSSTEIRRFLSAGELRRANLFLGKPYMIMKEVSHGA 182

Query: 201 KIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           ++GRTLGFPTAN    S  ++ K GVYA R    D   Y  + N G  PT+   G  L E
Sbjct: 183 QLGRTLGFPTANQVFESGQLVPKFGVYASR-TLADGKWYPSMTNIGVKPTVEYGGAPLAE 241

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           ++I  FS ++YG+   V   D++R E +F  +++L+  +  D   A   L
Sbjct: 242 TYIHGFSGDLYGRALQVVLLDFIRAEKRFASVDELRDQISSDVNAAVNAL 291


>gi|328479997|gb|EGF49026.1| riboflavin biosynthesis protein ribF [Lactobacillus rhamnosus MTCC
           5462]
          Length = 297

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 15/282 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE- 79
           V+ +G FDG+H GH  +++   ++A     T    + +   I +S +      P  I   
Sbjct: 21  VLTLGFFDGVHRGHQAVIQAGKRVALRKK-TATCCDDYLICIRRSCTVALPKLPFDIYRH 79

Query: 80  ----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
                ++++ G   L    FT   A  S + F+   LV  L+   V+ G  + +GK    
Sbjct: 80  AKKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLVG-LKAAAVVAGFDYTYGKRAVA 138

Query: 136 DRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +  +L +  RG    F  V + +L  +  +I SS+ IR AL +G +  A  LLGY +   
Sbjct: 139 NMALLPEYARGR---FEVVSVPKLAEDGKKI-SSTRIRDALDRGDIDTANELLGYVYLTT 194

Query: 194 SDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HGE  GR LGFPT N+  L    L   G+YA+  +  D T Y G+A+ GRN T   
Sbjct: 195 GKVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKV-DDTWYLGMASIGRNVTFGD 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L
Sbjct: 254 DRAITLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFSGADAL 295


>gi|187765172|gb|ACD36425.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + ++ S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSDLSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLVA-LHVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|241889583|ref|ZP_04776881.1| riboflavin biosynthesis protein RibF [Gemella haemolysans ATCC
           10379]
 gi|241863205|gb|EER67589.1| riboflavin biosynthesis protein RibF [Gemella haemolysans ATCC
           10379]
          Length = 305

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 156/311 (50%), Gaps = 13/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHP 59
           M +F+  +I++ +    K  V A+G FDGIH  H  I+  A++ A       V++ +  P
Sbjct: 1   MEIFNISDISE-IKEENKKRVAALGFFDGIHKAHQKIIGSAVEAAGKGFKSAVITLDKSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     +S   +L+P + + ++L  +G   +   +F  +  N SA++FI  +L + L V+
Sbjct: 60  KEYFGKTSEE-SLTPTNKKNELLTSLGVDEVYYLEFNEKLQNLSAKEFINNIL-KKLNVE 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  +RFG    G   +++  G       V + E +    + +S++ +   + KG  
Sbjct: 118 KVFCGFDYRFGYKGLGTPDLIKDSG-----IEVIVQEKQKIDEEKISTTVLIEFVRKGEF 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTS 237
                  G  ++I   V+ G ++GRT+ FPTAN++L    LL +  GVY  + +  +   
Sbjct: 173 SKYKAYTGRFYSISGLVVKGRQLGRTINFPTANLELDDKYLLPDTNGVYITKIKVNNNI- 231

Query: 238 YSGVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  V N G NPT+        +E+ I DF ++IYG++  + F+++LR E KF+  + LK 
Sbjct: 232 YKSVTNIGYNPTVSDEKNKKFIETHILDFDEDIYGEKIEIYFYEFLRKEQKFESFDHLKE 291

Query: 297 YMGEDEKKARK 307
            +  D+K   +
Sbjct: 292 QLKLDKKNCEE 302


>gi|229824133|ref|ZP_04450202.1| hypothetical protein GCWU000282_01437 [Catonella morbi ATCC 51271]
 gi|229786487|gb|EEP22601.1| hypothetical protein GCWU000282_01437 [Catonella morbi ATCC 51271]
          Length = 315

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 12/305 (3%)

Query: 14  PN--HLKGGVV-AIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ--SS 66
           PN   LKG +V  +G FDG+H GH  +++   + A+    P+ V++FN HP+ +    ++
Sbjct: 9   PNIPQLKGPIVLVLGFFDGVHRGHQAVIQAGRRQADRLGLPLAVMTFNQHPKIVYSRLTA 68

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + +  LS    +  +LE      +    FT    + S + F++  +V  L+ + V+ G  
Sbjct: 69  AEMDYLSDLDRKMDLLEANQVDMVFLVDFTYPFGSQSPQAFVENYIV-GLKAQVVVAGFD 127

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           + +G     +   L +      F  + + EL  N+ +I  S+ IR  L +G +  A   L
Sbjct: 128 YTYGPKEEANMSTLPQHAAGR-FQIIEVPELVLNQEKI-GSTPIRELLLEGKIDEANLAL 185

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           GY +     V+HGEK GRT+GFPTAN++  +  +    G+Y +  +  +   + G+A+ G
Sbjct: 186 GYVYETSGVVVHGEKRGRTIGFPTANIRPQAGQVQPGPGIYVVEIQV-NGIWHQGMASIG 244

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            N T   +  L  E  IF+F+Q IYG+   V +  YLR E+KF+ ++ L   +  D+  +
Sbjct: 245 YNVTFETDTGLTCEVHIFNFNQLIYGETVKVRWHHYLRGEVKFESVQGLIQQLQADQAAS 304

Query: 306 RKILE 310
           +   +
Sbjct: 305 QAYFQ 309


>gi|300768175|ref|ZP_07078080.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180803|ref|YP_003924931.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|300494239|gb|EFK29402.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046294|gb|ADN98837.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 333

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 15/294 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++  A + A        V++F+ HP  + + + P       +I 
Sbjct: 21  VLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQHPSVVFKHTDPQQVRYLTTID 80

Query: 79  EK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +K  ++ ++G   L    F         + F+ +++V  L  +TV+ G  + +G     +
Sbjct: 81  QKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIVG-LHAQTVVAGFDYTYGPAEIAN 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                +R   YG +   I E+   +  ++ +SS+ IR AL  G +  A  LLGY++    
Sbjct: 140 ----MQRLNDYGHNRFEIIEVPKAELDAEKISSTRIRRALDAGDIDTANRLLGYQYETAG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY-SGVANFGRNPTMVP 252
           +V+HGE  GRTLGFPTAN+   P+  +   G+YA     Q  T +  G+A+ GRN T   
Sbjct: 196 EVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYAT--MVQIGTRWVMGMASVGRNVTFGD 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + P+ +E ++  F  ++YG   TV +   +R EIKF   + L   +  DE+  R
Sbjct: 254 HRPITVEIYLLGFQGDLYGHNLTVRWGHRMRGEIKFAGADALVAQLKRDEQNTR 307


>gi|217076700|ref|YP_002334416.1| riboflavin biosynthesis protein RibF [Thermosipho africanus TCF52B]
 gi|217036553|gb|ACJ75075.1| riboflavin biosynthesis protein RibF [Thermosipho africanus TCF52B]
          Length = 289

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 24/301 (7%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR--TII---QSSSPIFTLSPP 75
           VV +G FDG+H GH  IL     ++         +N  P   TI+   +  +  F     
Sbjct: 3   VVTVGVFDGVHKGHQEILNSLKNLSK-------EYNASPEIYTIVFPMEYYTGNFDGLLI 55

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           S++++I  LE  G    +  +   + + Y    FI K      + K ++ G  FRFGK+ 
Sbjct: 56  SLEDRITLLEMYGNVYTLNLQEIKDLSPYDFFDFISK------DTKAIVVGQDFRFGKNA 109

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           AG+  +L+   ++   +   + +L  +  + VSS+ IR  L +G++  A +LLG  + I 
Sbjct: 110 AGNVNLLENLSKEKNINLKVVADLIIDGKR-VSSTLIRKLLKEGNIQKANYLLGRNYPIY 168

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V   +++GR LGFPTAN++ S +++  K GVY  +  T     + G+ N G  PT+  
Sbjct: 169 GKVYKDKQLGRKLGFPTANIRRSKELITPKFGVYLCKVYTP--KLHFGLMNIGLRPTVEK 226

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              +  E +I DF++++YG+   V   ++LR E  F+ I+ L   M  DEK ARK+LE  
Sbjct: 227 TKSVKYEVYILDFNEDLYGKEIRVELLEFLREETTFESIDALIEQMKNDEKTARKLLEEK 286

Query: 313 Y 313
           Y
Sbjct: 287 Y 287


>gi|282881173|ref|ZP_06289860.1| riboflavin biosynthesis protein RibF [Prevotella timonensis CRIS
           5C-B1]
 gi|281304977|gb|EFA97050.1| riboflavin biosynthesis protein RibF [Prevotella timonensis CRIS
           5C-B1]
          Length = 316

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 8/290 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ + ++ A  +  P  V++F+ HPR ++Q       L+    +
Sbjct: 17  VATIGFFDGVHRGHQYLIRKVVEKAKQAGMPSVVVTFDQHPRAVLQKDYVPELLTTNEQK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L +     ++   FT   A  +A++F+  +L   L+V  +  G   +FG  R     
Sbjct: 77  FDLLARTAVDCVVVLHFTPTMAALTAQEFMAHILHHQLKVHALFIGYDHQFGYHRREGFA 136

Query: 139 ILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              + G++ G   +  D  + + + + VSSS IR  + +G +  A   LGY +T+ S+VI
Sbjct: 137 DYVRYGQQLGMEVIRNDAYVDDEEGKQVSSSIIRKMIREGELPLANRCLGYPYTLTSNVI 196

Query: 198 HGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPN 253
            G + GR LGFPTAN+ +     +L  +GVYA++ +  D+T   Y G+ + G  PT    
Sbjct: 197 GGFQEGRKLGFPTANLDIEQITQLLPAQGVYAVQAQI-DKTGAWYRGMTSIGTRPTFHGT 255

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
              +  + + ++   IY  + +++F++ LR E  F  ++ L+  + +D +
Sbjct: 256 SLSIETNLLDNYHANIYQHQLSIAFYERLREEKCFSGVDDLRQQLVQDAE 305


>gi|222153118|ref|YP_002562295.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus uberis 0140J]
 gi|222113931|emb|CAR42159.1| putative riboflavin biosynthesis protein [Streptococcus uberis
           0140J]
          Length = 313

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 17/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+HLGH  + +QA K+A      I  L+FN  P+      +P  +  ++ P 
Sbjct: 19  ILVLGYFDGLHLGHKALFDQAKKLAEKESLKIVTLTFNESPKLAFTRFTPDLLLHIAYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +   + G   L    FT + +  S++ FI K  +  L+ K ++ G  ++FG +R  +
Sbjct: 79  KRYEKFSEYGVDHLYLIDFTTDFSKVSSDDFI-KYYIGQLKAKYIVVGFDYKFGHNRT-N 136

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              LQ+   G+ Y    V ID       + +SS+ IR  + +G+V     LLGY F+   
Sbjct: 137 SDYLQRNFEGKVYTIDEVSID------GRKISSTWIRELIKEGNVSKINQLLGYEFSTRG 190

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GRTLGFPTAN+  +    L  +GVY        +   S + + G+N T    
Sbjct: 191 MVVHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVIVNGKRHRS-MTSIGKNVTF-GG 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             L LE+ IFDF ++IYG+   + +   +R   KF  IE L   +  D++ A
Sbjct: 249 TELRLEANIFDFDRDIYGESIEIIWLSKIREMTKFSGIEDLVDQLHADKQIA 300


>gi|294101958|ref|YP_003553816.1| riboflavin biosynthesis protein RibF [Aminobacterium colombiense
           DSM 12261]
 gi|293616938|gb|ADE57092.1| riboflavin biosynthesis protein RibF [Aminobacterium colombiense
           DSM 12261]
          Length = 316

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 19/301 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG FDG H GH L+L++A  + +  N    V++F PHP+ +      +F L   + +
Sbjct: 2   IQVIGAFDGFHKGHQLLLKEAERLSVEQNDTWGVVTFTPHPQYVFNPDR-LFLLFTEAEK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I   +    ++   F    A  +   F+++ L     V  ++ G  FRFG  R GD  
Sbjct: 61  RQIASALHIQNILWMPFDQYIAALNPLDFLRR-LESQTSVTGIVVGENFRFGAGRKGDIA 119

Query: 139 ILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            L++  +K         T+ ID L       VSS+ IR+ +  G +  A +LLGY F + 
Sbjct: 120 FLRQYCKKKNILFSPVPTLEIDGL------AVSSTVIRSEVLSGRMQMAKYLLGYPFFLY 173

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+HG   GR LGFPTAN+ + PD  I+   G YA      D + + G  N G NPT  
Sbjct: 174 ETVVHGHHRGRELGFPTANLTV-PDHKIIPPSGTYAATV-IIDGSFHPGALNIGSNPTFT 231

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               L +E  I  FS ++Y ++  V   +YLR E +F + + L   +  D + A  + E 
Sbjct: 232 DVKGLRIEVHIPGFSDDLYNKKIMVFIEEYLRSEKRFSNRQALAKQLSRDSEIAVTLFEE 291

Query: 312 S 312
           +
Sbjct: 292 N 292


>gi|84393571|ref|ZP_00992324.1| hypothetical protein V12B01_08767 [Vibrio splendidus 12B01]
 gi|84375780|gb|EAP92674.1| hypothetical protein V12B01_08767 [Vibrio splendidus 12B01]
          Length = 201

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 108/199 (54%), Gaps = 4/199 (2%)

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           +V+ L VK ++ G  F FGK R G+  +L++ GEKYGF  V       N+ + VSS+ IR
Sbjct: 1   MVDKLGVKFLVVGDDFCFGKGRTGNFAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIR 59

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            AL    +  +A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +   
Sbjct: 60  NALAVDDLAASATMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEAL 119

Query: 232 TQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
             D     GVAN G+ PT+  NG    LE   FDF   +YG++  V     LR EIKF+ 
Sbjct: 120 DIDGVPVGGVANIGQRPTV--NGVRQQLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFES 177

Query: 291 IEKLKIYMGEDEKKARKIL 309
            + LK  +  D + AR  L
Sbjct: 178 FDALKNQIELDAEAARVWL 196


>gi|187765116|gb|ACD36397.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765118|gb|ACD36398.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765122|gb|ACD36400.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765124|gb|ACD36401.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765126|gb|ACD36402.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765132|gb|ACD36405.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765140|gb|ACD36409.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765144|gb|ACD36411.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765178|gb|ACD36428.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765182|gb|ACD36430.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765188|gb|ACD36433.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765190|gb|ACD36434.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765192|gb|ACD36435.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765194|gb|ACD36436.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765200|gb|ACD36439.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765206|gb|ACD36442.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765210|gb|ACD36444.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765212|gb|ACD36445.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765218|gb|ACD36448.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765222|gb|ACD36450.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765226|gb|ACD36452.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765240|gb|ACD36459.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765250|gb|ACD36464.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765260|gb|ACD36469.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765268|gb|ACD36473.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765282|gb|ACD36480.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765284|gb|ACD36481.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765290|gb|ACD36484.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765300|gb|ACD36489.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765312|gb|ACD36495.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765324|gb|ACD36501.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765328|gb|ACD36503.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765338|gb|ACD36508.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765342|gb|ACD36510.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765344|gb|ACD36511.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765348|gb|ACD36513.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765352|gb|ACD36515.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765358|gb|ACD36518.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765360|gb|ACD36519.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765364|gb|ACD36521.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765366|gb|ACD36522.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765368|gb|ACD36523.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765370|gb|ACD36524.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765372|gb|ACD36525.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765376|gb|ACD36527.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765378|gb|ACD36528.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765380|gb|ACD36529.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765382|gb|ACD36530.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765388|gb|ACD36533.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765396|gb|ACD36537.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765402|gb|ACD36540.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765404|gb|ACD36541.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765410|gb|ACD36544.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765414|gb|ACD36546.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765422|gb|ACD36550.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765428|gb|ACD36553.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765430|gb|ACD36554.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765432|gb|ACD36555.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765436|gb|ACD36557.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765444|gb|ACD36561.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765446|gb|ACD36562.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765450|gb|ACD36564.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765464|gb|ACD36571.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324153|gb|ADA60618.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324171|gb|ADA60627.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|226952304|ref|ZP_03822768.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|294648749|ref|ZP_06726208.1| FAD synthetase [Acinetobacter haemolyticus ATCC 19194]
 gi|226836970|gb|EEH69353.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|292825363|gb|EFF84107.1| FAD synthetase [Acinetobacter haemolyticus ATCC 19194]
          Length = 333

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 41/330 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q   +A+   +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKSLASAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + +A +F   +L   L  
Sbjct: 64  KGYD-----APPRISSLREKVEYLTELGVDYIAVAKFDQYFRSLNATEFAD-LLKFKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G  F FGKDR G+   L+     YGF+   +D +  N  + VSS+ IR  L +G 
Sbjct: 118 QTLVLGDDFHFGKDRQGNSEFLRD----YGFNVTNLDTIALNDER-VSSTRIRQVLQEGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-- 236
           +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+YA+    ++ +  
Sbjct: 173 LALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLSGIYAVDVVCENASLT 232

Query: 237 -------------------SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
                              S  G  + G  P +    P   LE    D S  +YG    V
Sbjct: 233 AKVKHTNPALNGIAGYQSDSLFGAGHVGTRPAIEQVQPEWRLEVHFPDVSANLYGLLMRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +F  YL  E+ +  +E LK  + +D +K R
Sbjct: 293 TFLHYLHGELNYPSLEALKAGIDDDVQKLR 322


>gi|312880108|ref|ZP_07739908.1| riboflavin biosynthesis protein RibF [Aminomonas paucivorans DSM
           12260]
 gi|310783399|gb|EFQ23797.1| riboflavin biosynthesis protein RibF [Aminomonas paucivorans DSM
           12260]
          Length = 350

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 15/308 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
           ++A+G+FDG H GH L+L+ A K A    +P  VL+F+ HP++++Q    P+  L     
Sbjct: 2   ILALGSFDGFHRGHQLLLQGARKRAAEKKTPWGVLTFSCHPQSVLQGHPYPLLFLE--KE 59

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ +    G    +   F    A  S E F+   L        ++ G  FRFGK R G  
Sbjct: 60  RQLLAAYWGIPRFLVIPFDRALAELSPEGFLD-YLDRRFSPTGLVVGENFRFGKGRGGTP 118

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            IL++  +   +    I  L   + + +SSS IR ++  G +  AA  LG+ F ++  V 
Sbjct: 119 EILRRLCDARHWSLDVIPSL-YWQDRPISSSQIRESVRSGRLEEAAACLGHPFLVQGTVT 177

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G++ GR LGFPTAN+ L P+ I+   GVY      +    ++G  N G NPT      L
Sbjct: 178 RGDQRGRELGFPTANLALKPEKIVPDRGVYGACVWAEG-AWWTGALNVGFNPTFDGIRGL 236

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
             E  +   S ++YG+   V     +R E++F D   L   M +D +  R+        +
Sbjct: 237 RFEVHLLGASLDLYGKPLWVFPLRKVREELRFPDRGSLIRQMEKDVETIRRW------KA 290

Query: 317 ERDRIICF 324
           ++D   CF
Sbjct: 291 QKDSYACF 298


>gi|85679189|gb|ABC72011.1| RibC [Listeria monocytogenes]
          Length = 213

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L VK V+ G  + +GK   G    L +  +  G   V I + + + S  +SS+NI
Sbjct: 63  YLV-ALNVKHVVAGFDYSYGKKGEGKMTDLAQYAD--GRFEVTIVDKQTDASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|330892729|gb|EGH25390.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 219

 Score =  122 bits (307), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 110/221 (49%), Gaps = 23/221 (10%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKIELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTAL 174
            +  G  FRFG DR GD   LQ+ G  YGF      TV ID +R      VSS+ +R AL
Sbjct: 119 HLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEIDGIR------VSSTKVRKAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
                  A  +LG  F I   V+HG+K+ R LG PTAN+QL
Sbjct: 173 AASDFALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQL 213


>gi|322506233|gb|ADX01687.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii 1656-2]
          Length = 333

 Score =  122 bits (307), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFA-DLLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKNYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----- 232
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 233 -----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD +   G+A +           G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNSEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|317129158|ref|YP_004095440.1| riboflavin biosynthesis protein RibF [Bacillus cellulosilyticus DSM
           2522]
 gi|315474106|gb|ADU30709.1| riboflavin biosynthesis protein RibF [Bacillus cellulosilyticus DSM
           2522]
          Length = 312

 Score =  122 bits (306), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 9/286 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +A+G FDG+H GH  ++  A   A    +   V++F PHP+ +++    ++ L+    +
Sbjct: 19  CLALGFFDGVHKGHQEVILTAKNEAKKRQLRSGVMTFFPHPKEVLRKEKKVYYLTLMKKK 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E ++ ++G   L    F    A  + +QF+ + L+  L VK V+ G  + +G+   G   
Sbjct: 79  EALIRQLGIDYLFIVTFNETFAELNPQQFVDQYLIA-LNVKHVVAGFDYTYGRLGKGTME 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L         +T  + ++  N  +I SS+NIR  L  G +  A   LG  +     VIH
Sbjct: 138 TLLFHSRNELTYTT-VGQVSANGEKI-SSTNIRHFLQCGDLKRANDYLGRPYETSGTVIH 195

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM--VPNGP 255
           GEK GRT+GFPTAN+ L         GVY +R    ++     V N G  PT   +  G 
Sbjct: 196 GEKRGRTIGFPTANVLLEERSFTPNSGVYIVRLLVNNEWK-EAVCNVGYKPTFHKLREGE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
             +E  + +F+ +IYG+  T+ +   LR E KF  I +LK  +  D
Sbjct: 255 PTIEVHVTNFNDDIYGETVTIQWLSKLRDEKKFNSIGELKAQLEND 300


>gi|262281443|ref|ZP_06059224.1| riboflavin kinase [Acinetobacter calcoaceticus RUH2202]
 gi|262257269|gb|EEY76006.1| riboflavin kinase [Acinetobacter calcoaceticus RUH2202]
          Length = 333

 Score =  122 bits (306), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 151/331 (45%), Gaps = 41/331 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           Q        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  QGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSATEFA-DLLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FGKDR G+   L+  G  +G   +   EL   +   VSS+ IR  L  G+
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKDYG--FGVTNLHTIELEGER---VSSTRIRQVLQAGN 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT------ 232
           +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +          
Sbjct: 173 LALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSLT 232

Query: 233 ----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
               QD     G+A +           G  P +    P   LE    D S  +YG    V
Sbjct: 233 QKVLQDAPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +F  YL  E+ +  +E LK  +  D  + R+
Sbjct: 293 TFLHYLHGELNYPSLEALKAGIDNDVHQLRQ 323


>gi|298345255|ref|YP_003717942.1| putative FAD synthetase [Mobiluncus curtisii ATCC 43063]
 gi|298235316|gb|ADI66448.1| possible FAD synthetase [Mobiluncus curtisii ATCC 43063]
          Length = 331

 Score =  122 bits (306), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 13/308 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           ++I +  P++    +V IG FDG+H GH  I+E+ + +A+   +   VL+F+P PR +  
Sbjct: 1   MQIFRDKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPLPRQVHH 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  +   + +   +E++G       ++ L+ A  S  +F+ K LV  L  + V+ G
Sbjct: 61  PDPKNKLICSLADRLTRIEQLGVDTTWVQQYDLDFAAQSPAEFVHKYLVAPLRPEVVVIG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTALTKGHVLNAA 183
              RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G V  AA
Sbjct: 121 EDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQGRVDQAA 180

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT----QDQTSY 238
           ++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R       +T  
Sbjct: 181 YVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPPHSKTPS 240

Query: 239 S-----GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           S        + G +P     G  +    +     ++YG+   + F   +R  + F  ++ 
Sbjct: 241 SLEVVPAAISVGTSPHFGDVGRTVEAHVLGRADLDLYGEEVVIEFVHRIRDNLAFDSLDA 300

Query: 294 LKIYMGED 301
           L   M  D
Sbjct: 301 LLERMDCD 308


>gi|226329207|ref|ZP_03804725.1| hypothetical protein PROPEN_03110 [Proteus penneri ATCC 35198]
 gi|225202393|gb|EEG84747.1| hypothetical protein PROPEN_03110 [Proteus penneri ATCC 35198]
          Length = 202

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 112/195 (57%), Gaps = 3/195 (1%)

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L VK +  G  FRFGK+R GD   LQ+ GE+YGF  V   E   +K   +SS+ +R AL 
Sbjct: 4   LGVKFLAIGDDFRFGKNREGDFHFLQQAGERYGFE-VASTESYCDKGLRISSTAVREALL 62

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-FRTQD 234
              ++ A  LLG+ +++   V+HG ++GRT+GFPTAN+ +   +   +GVYA+  + + +
Sbjct: 63  NDDLVLAESLLGHPYSVCGRVVHGNELGRTIGFPTANIPMKRLVAPVKGVYAVDVYLSDN 122

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           Q+   GVAN G  PT+   G + LE  + D + ++YG+R  V     LR E +F  ++ L
Sbjct: 123 QSPLPGVANIGSRPTVKGKG-VQLEVHLIDVNMDLYGRRIDVVLRKKLRNEQRFASLDAL 181

Query: 295 KIYMGEDEKKARKIL 309
           K  + +D   AR  L
Sbjct: 182 KQQIADDVATARDFL 196


>gi|329116065|ref|ZP_08244782.1| riboflavin biosynthesis protein RibF [Streptococcus parauberis NCFD
           2020]
 gi|326906470|gb|EGE53384.1| riboflavin biosynthesis protein RibF [Streptococcus parauberis NCFD
           2020]
          Length = 310

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 17/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  + ++A  +A   N  I  L+FN  P+      +P  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKALFDKAKSLAKKENLKIVSLTFNETPKLAFAKYNPELLLHITYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +   + G   L    FT   +  +++ FI+  +   L  K ++ G  ++FG +R  +
Sbjct: 79  KRYQKFSEHGVDHLYLIDFTTAFSKITSDDFIKNYIGS-LNAKYIVVGFDYKFGHNRT-N 136

Query: 137 RGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              LQ+   G+ Y      IDE+  N  +I SS+ IR A+  G V  A  LLGY FT   
Sbjct: 137 SDYLQRNFDGKVYT-----IDEVSFNGRKI-SSTWIREAIKSGDVNAANQLLGYDFTTRG 190

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GRTLGFPTAN+  +    L  +GVY        +  Y  + + G+N T   +
Sbjct: 191 MVVHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVLVNGRI-YRSMTSIGKNITFGGD 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             L LE  IFDF  +IYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 250 -ELRLEVNIFDFDGDIYGESLEIIWLDKIRDMAKFEGIEDLIDQLNNDKEIA 300


>gi|307299143|ref|ZP_07578944.1| riboflavin biosynthesis protein RibF [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914939|gb|EFN45325.1| riboflavin biosynthesis protein RibF [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 302

 Score =  122 bits (305), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 19/308 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF-----TLSPP 75
           V  IGNFDG+HLGH  I+++ + IA N     L       +I+      F      + P 
Sbjct: 6   VACIGNFDGVHLGHRAIMQKTVNIAAN-----LDLQSTAISIVYPWGYYFPNFPGIIYPV 60

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   ++    + E      E +I +++ E +  + ++ G+ F FG    G
Sbjct: 61  AQRLELILATGIERVLTVNMS-EIRYLEPEDYISRLMSEGM--RAIVVGSDFTFGNGAKG 117

Query: 136 DRGILQKRGEKYGFHTVFI-DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           +  +L++  ++       + D L + +   +SSS IR ++ KG +     LLG R++I  
Sbjct: 118 NIELLERISKEGDLRVEIVPDALYDGRR--ISSSWIRESIAKGDIGLTNSLLGKRYSIRG 175

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL--KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V   +++G  +GFPTAN+    + L+  + GVY I   T D   Y G+ N G  PT+  
Sbjct: 176 KVYKDKQLGAKIGFPTANIHRGDERLVIPRSGVYII-MSTIDSRDYFGLLNVGFRPTVNT 234

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  +  E + FD+S  +Y +   + F +++RPE+KF  + +L   +  DE+ AR+ LE  
Sbjct: 235 SEEVKYEVYFFDYSGNLYNRNLELEFLEFIRPELKFDSLGELIEQIKHDERVARRWLEIH 294

Query: 313 YPLSERDR 320
             + +++R
Sbjct: 295 LNMLKKER 302


>gi|304390812|ref|ZP_07372764.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304325695|gb|EFL92941.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 331

 Score =  122 bits (305), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 150/310 (48%), Gaps = 17/310 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           ++I +  P++    +V IG FDG+H GH  I+E+ + +A+   +   VL+F+P PR +  
Sbjct: 1   MQIFRDKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPLPRQV-H 59

Query: 65  SSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              P   L  S P    +I E++G  A    ++ L+ A  S  +F+   LV  L  + V+
Sbjct: 60  HPDPKNKLICSLPDRLTRI-EQLGVDATWVQQYDLDFAAQSPAEFVHNYLVAPLRPEVVV 118

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTALTKGHVLN 181
            G   RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G V  
Sbjct: 119 IGEDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQGRVDQ 178

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT----QDQT 236
           AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R       +T
Sbjct: 179 AAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPPHSKT 238

Query: 237 SYS-----GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
             S        + G +P     G  +    +     ++YG+   + F   +R  + F  +
Sbjct: 239 PSSLEVVPAAISVGTSPHFGDVGRTVEAHVLGRADLDLYGEEVVIEFVHRIRDNLAFDSL 298

Query: 292 EKLKIYMGED 301
           + L   M  D
Sbjct: 299 DALLERMDRD 308


>gi|187765176|gb|ACD36427.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765186|gb|ACD36432.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765230|gb|ACD36454.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765242|gb|ACD36460.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765244|gb|ACD36461.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765254|gb|ACD36466.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324149|gb|ADA60616.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324205|gb|ADA60644.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            +V  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YVV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|187765150|gb|ACD36414.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   +  +SS+NI
Sbjct: 63  YLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAATDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|187765120|gb|ACD36399.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765332|gb|ACD36505.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765346|gb|ACD36512.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765356|gb|ACD36517.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765384|gb|ACD36531.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L +  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|302335783|ref|YP_003800990.1| riboflavin biosynthesis protein RibF [Olsenella uli DSM 7084]
 gi|301319623|gb|ADK68110.1| riboflavin biosynthesis protein RibF [Olsenella uli DSM 7084]
          Length = 355

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 6/281 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG FDG H GH  ++   I  A        V++F+P P +++   +    L     + + 
Sbjct: 60  IGVFDGFHRGHQALVATTIADARARGCLSAVVTFDPDPASVLGHKAISTELLSARDRVRA 119

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L      A++   FT E +  S   F   VL E L   ++  G+ FR G   AGD   L+
Sbjct: 120 LAAAAPDAILVLDFTEELSATSYRAFFSDVLGEALRPVSLHVGSDFRLGAQGAGDVSALR 179

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           + G   G   VF  +L       VSS+ +R  L +G V  AA LLG    +   V HG  
Sbjct: 180 ELGRFCGMD-VFGHDLVAEGDVKVSSTRVRNLLHEGRVERAAQLLGRCHFVRGVVTHGRG 238

Query: 202 IGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            G +LGFPTAN+++ P+  +  EGVYA  +  +   ++    N G  PT     P  LE+
Sbjct: 239 EGSSLGFPTANVRVRPEACMPAEGVYACLY-IEGGRAWPAAVNVGSPPTFADPDPSFLEA 297

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL-KIYMGE 300
            +  F  ++YG   TV F  +LR    F   E+L ++ +G+
Sbjct: 298 NLIGFDGDLYGSEATVIFVRWLRASRPFDSTEELERVVLGD 338


>gi|169632049|ref|YP_001705785.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii SDF]
 gi|169797771|ref|YP_001715564.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii AYE]
 gi|184156363|ref|YP_001844702.1| FAD synthase [Acinetobacter baumannii ACICU]
 gi|213155431|ref|YP_002317476.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB0057]
 gi|215485120|ref|YP_002327361.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB307-0294]
 gi|239503749|ref|ZP_04663059.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB900]
 gi|301347568|ref|ZP_07228309.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB056]
 gi|301510773|ref|ZP_07236010.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB058]
 gi|301596563|ref|ZP_07241571.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB059]
 gi|332855722|ref|ZP_08436018.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013150]
 gi|332866679|ref|ZP_08437141.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013113]
 gi|332873533|ref|ZP_08441482.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6014059]
 gi|169150698|emb|CAM88608.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter baumannii AYE]
 gi|169150841|emb|CAO99444.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter baumannii]
 gi|183207957|gb|ACC55355.1| FAD synthase [Acinetobacter baumannii ACICU]
 gi|213054591|gb|ACJ39493.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB0057]
 gi|213987942|gb|ACJ58241.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB307-0294]
 gi|323516109|gb|ADX90490.1| FAD synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727308|gb|EGJ58748.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013150]
 gi|332734448|gb|EGJ65563.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013113]
 gi|332738230|gb|EGJ69108.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6014059]
          Length = 333

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFA-DLLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKNYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----- 232
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 233 -----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A +           G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|239618460|ref|YP_002941782.1| riboflavin biosynthesis protein RibF [Kosmotoga olearia TBF 19.5.1]
 gi|239507291|gb|ACR80778.1| riboflavin biosynthesis protein RibF [Kosmotoga olearia TBF 19.5.1]
          Length = 299

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 150/292 (51%), Gaps = 15/292 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPSI 77
           V IGNFDG+HLGH  I+ + +K++   N   T LS   +P      + P  I+T++    
Sbjct: 7   VCIGNFDGVHLGHRKIMSETLKLSRKLNVCSTALSIM-YPWGYYFPNFPGLIYTIAK--- 62

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +++  +G   ++      E  +   E++I  ++ + +    ++ G  F FGK   G+ 
Sbjct: 63  RVELILSLGIKNVVTVDIE-EIKDIEPEEYILALINQGM--VGLVVGEDFTFGKGARGNT 119

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L++   K  F  V +  L+ +  +I SSS IR  L +G +  A  LLG  +TI   V 
Sbjct: 120 ELLRELSRKLKFELVIVPHLKRDGRKI-SSSWIRELLAQGKIELANELLGSPYTISGKVY 178

Query: 198 HGEKIGRTLGFPTANMQ--LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              ++G  LGFPTAN+   +   +  + GVY ++     +  Y G+ N G  PT+  +  
Sbjct: 179 QDNRLGTKLGFPTANISRGIEKVVTPRSGVYIVKSIIGSRLYY-GLLNIGFRPTVNFSKE 237

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +  E +  DFS ++YG+R  +    +LRPE+KF  I++L   +  DE+ ARK
Sbjct: 238 IKYEVYFLDFSGDLYGKRLEIELLKFLRPELKFASIDELVHAIRRDERIARK 289


>gi|139436985|ref|ZP_01771145.1| Hypothetical protein COLAER_00119 [Collinsella aerofaciens ATCC
           25986]
 gi|133776632|gb|EBA40452.1| Hypothetical protein COLAER_00119 [Collinsella aerofaciens ATCC
           25986]
          Length = 335

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTL 72
            HL    +AIG FDG+H GH  ++   ++ A  +     V++F+P P  ++ SSSP   L
Sbjct: 32  EHLGAASIAIGVFDGVHRGHQELIAALVRDARAHGCKAVVVTFDPDPDVVV-SSSPAQKL 90

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              + +   L + G   ++   FT E A      F+  +L   ++++++  G+ FR G  
Sbjct: 91  MTTADRLHALAQTGVDVVVAVPFTPEVAVLDHVGFL-ALLSRVVDIRSIRVGSDFRLG-- 147

Query: 133 RAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           R G  G+ + R  G  +G   V+  +L     + + ++ IR  L +GHV  AA LLG  +
Sbjct: 148 RGGASGVAEMRAWGAVHGV-DVYGHDLLCEGGEAICATRIRHELGQGHVELAAELLGRPY 206

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +   VI G   G  +GFPTAN+Q+   I +  +GVY       D T +    N G  PT
Sbjct: 207 MVRGGVIRGRHEGSGMGFPTANLQVPDGIQVPADGVYE-GLVLVDDTVWPAAVNVGLPPT 265

Query: 250 MVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +     LE+ +  ++ ++YG   +++F  +LRP   F  +++L
Sbjct: 266 YADDAASAHLEANLIGYTGDLYGSSVSLAFTRWLRPSRLFDSLDEL 311


>gi|259501591|ref|ZP_05744493.1| riboflavin biosynthesis protein RibF [Lactobacillus iners DSM
           13335]
 gi|302191435|ref|ZP_07267689.1| FAD synthase [Lactobacillus iners AB-1]
 gi|259167109|gb|EEW51604.1| riboflavin biosynthesis protein RibF [Lactobacillus iners DSM
           13335]
          Length = 309

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IHTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ + S  IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINSKKILPCNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSL 291


>gi|309804433|ref|ZP_07698501.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           09V1-c]
 gi|309809700|ref|ZP_07703555.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           2503V10-D]
 gi|308166246|gb|EFO68461.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           09V1-c]
 gi|308169980|gb|EFO72018.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           2503V10-D]
          Length = 309

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+   F   T       FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K   + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNNK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IYG++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYGEKIILYWYEFIRDNIKFNDINSL 291


>gi|260553014|ref|ZP_05825929.1| riboflavin kinase [Acinetobacter sp. RUH2624]
 gi|260405256|gb|EEW98753.1| riboflavin kinase [Acinetobacter sp. RUH2624]
          Length = 333

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASKFA-DLLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKNYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----- 232
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 233 -----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A +           G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDDPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|15604812|ref|NP_219596.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis D/UW-3/CX]
 gi|76788806|ref|YP_327892.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis A/HAR-13]
 gi|237802525|ref|YP_002887719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237804442|ref|YP_002888596.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255310895|ref|ZP_05353465.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 6276]
 gi|255317195|ref|ZP_05358441.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 6276s]
 gi|255506668|ref|ZP_05382307.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis D(s)2923]
 gi|3328489|gb|AAC67684.1| Riboflavin kinase/FAD Synthase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167336|gb|AAX50344.1| riboflavin kinase [Chlamydia trachomatis A/HAR-13]
 gi|231272742|emb|CAX09646.1| riboflavin kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273759|emb|CAX10540.1| riboflavin kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|289525137|emb|CBJ14609.1| riboflavin kinase [Chlamydia trachomatis Sweden2]
 gi|296434681|gb|ADH16859.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis E/150]
 gi|296435610|gb|ADH17784.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/9768]
 gi|296436533|gb|ADH18703.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/11222]
 gi|296437470|gb|ADH19631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/11074]
 gi|296438398|gb|ADH20551.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis E/11023]
 gi|297139969|gb|ADH96727.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/9301]
          Length = 301

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K  + S   V++F+ HP 
Sbjct: 4   MDLFYSL-----LPSSNPVESVTIGFFDGCHLGHQALLSFLTKFPSKS--GVITFSQHPE 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E AN  AE FIQ +  + L    
Sbjct: 57  HTL-SNSPPETITSLEERVQLLAGCGIDYLAVLPFNQEIANQEAEPFIQSI-YKTLRPSR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+   + IVSS  IR  L K  + 
Sbjct: 115 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQIEGT-IVSSRKIRQFLRKKDLC 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V HG  IG + G+ T N+ L+   LL  GVY      +   SY+G
Sbjct: 174 SAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-LLPLGVYTCTIVIEG-FSYAG 231

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 232 VMNLGMAPTMQRHQ-LCLEAHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQE 290

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 291 DIRQAR 296


>gi|325912468|ref|ZP_08174861.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           143-D]
 gi|325475715|gb|EGC78888.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           143-D]
          Length = 309

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IHTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ + S  IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINSKKILPCNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSL 291


>gi|313890109|ref|ZP_07823744.1| riboflavin biosynthesis protein RibF [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121470|gb|EFR44574.1| riboflavin biosynthesis protein RibF [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 304

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 138/279 (49%), Gaps = 13/279 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+HLGH  + ++A  IA      I  L+F   P+       P  +  ++ P 
Sbjct: 19  VLVLGYFDGLHLGHKALFDKAQAIAQKESLKIVTLTFTESPKLAFARFEPELLLHIAYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +     G   L    FT   +N +++ FI+  +   L  K ++ G  ++FG +R   
Sbjct: 79  KRFEKFADYGVDNLYLVDFTTAFSNITSDDFIKNYIGR-LNAKYIVVGFDYKFGHNRTNS 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +  +R  K    TVF  E  + +++ +SS+ IR  + +G+V     LLGY F+    V
Sbjct: 138 DYL--RRNFK---GTVFTIEEISYENRKISSTWIRELIKEGNVAKVNQLLGYEFSTRGMV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRTLGFPTAN+  +    L  +GVY        Q  Y  + + G+N T      
Sbjct: 193 VHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVIVNGQ-RYRSMTSIGKNVTF-GGTE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           L LE+ IFDF +EIYG+   + +   +R   KF+ IE L
Sbjct: 251 LRLEANIFDFDREIYGESIEIIWLQKIREMTKFEGIEDL 289


>gi|317495425|ref|ZP_07953794.1| riboflavin kinase [Gemella moribillum M424]
 gi|316914484|gb|EFV35961.1| riboflavin kinase [Gemella moribillum M424]
          Length = 305

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 147/282 (52%), Gaps = 12/282 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPS 76
           K  V A+G FDG+H  H  I+ + +  A    + TV++ +  P+     S    +L+P  
Sbjct: 17  KKRVAALGFFDGVHKAHQKIISEMVSEAREGYVPTVITLDRSPKEYFAKSKEE-SLTPLK 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KI E++G   +   +F  +  N  A +FI K+L + L+V+ V  G  +++G   +G 
Sbjct: 76  KKSKIFEELGVEEVYYLEFNEQLQNLEAIEFIDKIL-KKLKVEKVFFGYDYKYGVKGSGT 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             ++   G K   H    +E+ ++K   +S++ +++ +     ++     G  ++I   V
Sbjct: 135 PEMILDSGIKVSIHEK--EEIEHHK---ISTTTLKSFVINNDFVSYIKFSGRAYSIVGTV 189

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTSYSGVANFGRNPTMVP-N 253
           I G+++GRT+ FPTAN+ L+ + LL +  GVY  +     +  Y  + N G NPT+    
Sbjct: 190 IKGKQLGRTINFPTANLDLTENYLLPKTNGVYLTKTMVGKKI-YKSLTNIGYNPTVSGIK 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               +E+ I DF ++IYG+   V F+++LRPE KF    +LK
Sbjct: 249 DKKSIETHILDFDEDIYGEEIEVYFYEFLRPEKKFDSFNRLK 290


>gi|322411872|gb|EFY02780.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 310

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  + ++A +IA   N  +  L+FN  PR      SP  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKALFDKAQEIARAENLAVVTLTFNESPRLAFSRFSPDLLLHITYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +   + G   L    FT   +  S++ FI   L + L+ K ++ G  ++FG +R  D
Sbjct: 79  KRHEKFAEYGVDRLYLIDFTSAFSMVSSDDFIAHYL-KLLKAKHIVVGFDYKFGHNRT-D 136

Query: 137 RGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              L +   G+ Y      I E+  ++ +I SS+ IR  + +G V    HLLGY  +   
Sbjct: 137 SDYLARNFDGDVY-----MIPEVTEDQEKI-SSTRIRKLILEGEVAKVNHLLGYELSTRG 190

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GRT+GFPTAN+  +    L  +GVY        +  Y  + + G+N T    
Sbjct: 191 MVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVNGK-KYRSMTSIGKNVTF-GG 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             L LE+ IF F  +IYG+   + + D +R   KF  IE L
Sbjct: 249 KELRLEANIFGFEGDIYGESIEIIWLDKIRDMAKFDGIEDL 289


>gi|260557769|ref|ZP_05829983.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii ATCC
           19606]
 gi|260408942|gb|EEX02246.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii ATCC
           19606]
          Length = 333

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFA-DLLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKNYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----- 232
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVDVICETTSL 231

Query: 233 -----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A +           G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|297748222|gb|ADI50768.1| Riboflavin kinase [Chlamydia trachomatis D-EC]
 gi|297749102|gb|ADI51780.1| Riboflavin kinase [Chlamydia trachomatis D-LC]
          Length = 307

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K  + S   V++F+ HP 
Sbjct: 10  MDLFYSL-----LPSSNPVESVTIGFFDGCHLGHQALLSFLTKFPSKS--GVITFSQHPE 62

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E AN  AE FIQ +  + L    
Sbjct: 63  HTL-SNSPPETITSLEERVQLLAGCGIDYLAVLPFNQEIANQEAEPFIQSI-YKTLRPSR 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+   + IVSS  IR  L K  + 
Sbjct: 121 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQIEGT-IVSSRKIRQFLRKKDLC 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V HG  IG + G+ T N+ L+   LL  GVY      +   SY+G
Sbjct: 180 SAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-LLPLGVYTCTIVIEG-FSYAG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 238 VMNLGMAPTMQRHQ-LCLEAHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQE 296

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 297 DIRQAR 302


>gi|299772088|ref|YP_003734114.1| riboflavin biosynthesis protein RibF [Acinetobacter sp. DR1]
 gi|298702176|gb|ADI92741.1| riboflavin biosynthesis protein RibF [Acinetobacter sp. DR1]
          Length = 333

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 152/331 (45%), Gaps = 41/331 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA  F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASAFAD-LLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G  F FGKDR G+   L+  G  +G   +   EL   +   VSS+ IR  L  G+
Sbjct: 118 QSLVLGDDFHFGKDRQGNSEFLKDYG--FGVTNLHTIELEGER---VSSTRIRQVLQVGN 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT------ 232
           +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +          
Sbjct: 173 LALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSLT 232

Query: 233 ----QDQTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
               QD     G+A +           G  P +    P   LE    D S  +YG    V
Sbjct: 233 QKVRQDTPEKPGIAGYHDNSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 293 TFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|281324161|gb|ADA60622.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324167|gb|ADA60625.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324169|gb|ADA60626.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLVA-LHVQHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   N  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDNQALSIEVYILD 213


>gi|85679171|gb|ABC72002.1| RibC [Listeria monocytogenes]
 gi|85679181|gb|ABC72007.1| RibC [Listeria monocytogenes]
 gi|85679187|gb|ABC72010.1| RibC [Listeria monocytogenes]
 gi|85679191|gb|ABC72012.1| RibC [Listeria monocytogenes]
          Length = 213

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKVEKMAELGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+++  D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVKEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|315656410|ref|ZP_07909299.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492969|gb|EFU82571.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 331

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 19/311 (6%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           ++I +  P++    +V IG FDG+H GH  I+E+ + +A+   +   VL+F+P PR +  
Sbjct: 1   MQIFRDKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPLPRQVHH 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  +   + +   +E++G  A    ++ L+ A  S  +F+   LV  L  + V+ G
Sbjct: 61  PDPKNKLICSLADRLTRIEQLGVDATWVQQYDLDFAAQSPAEFVHNYLVAPLRPEVVVIG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGF--HTV--FIDELRNNKSQIVSSSNIRTALTKGHVL 180
              RFG   +GD   L++ GE+ GF   TV   +D +   +    SSS +R  L +G V 
Sbjct: 121 EDMRFGAQNSGDAQTLRELGEESGFTVETVSNIVDPIFGRRW---SSSWVRELLAQGRVD 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT----QDQ 235
            AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R       +
Sbjct: 178 QAAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPPHSK 237

Query: 236 TSYS-----GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
           T  S        + G +P     G  +    +     ++YG+   + F   +R  + F  
Sbjct: 238 TPSSLEVVPAAISVGTSPHFGDVGRTVEAHVLGRADLDLYGEEVVIEFVHRIRDNLAFDS 297

Query: 291 IEKLKIYMGED 301
           ++ L   M  D
Sbjct: 298 LDALLERMDCD 308


>gi|262374479|ref|ZP_06067753.1| riboflavin biosynthesis protein RibF [Acinetobacter junii SH205]
 gi|262310475|gb|EEY91565.1| riboflavin biosynthesis protein RibF [Acinetobacter junii SH205]
          Length = 333

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   P+  L    V IGNFDG+HLGH  ++ Q   +A+   +   V+ F P P    
Sbjct: 4   LRLNALSPDFQLPPSAVTIGNFDGVHLGHQAMIAQLKTLADAKGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + +A +F + +L   L  
Sbjct: 64  KGYD-----APPRISSLREKVEYLTELGVDYIAVAKFDQYFRSLNATEFAE-LLKLKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G  F FGKDR G+   L+     YGF    ++ +  N  + VSS+ IR  L  G 
Sbjct: 118 QSLVLGDDFHFGKDRQGNSEFLRD----YGFDVTNLNTVALNGER-VSSTRIRQVLQAGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---- 234
           +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+YA+    ++    
Sbjct: 173 LALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLSGIYAVDVVCENASLT 232

Query: 235 ------QTSYSGVANF-----------GRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
                  T  +G+A +           G  P +  + P   LE    D S  +YG    V
Sbjct: 233 AKIQHIDTELNGIAGYQADSLFGAGHVGTRPAIQQDHPEWRLEVHFPDVSANLYGLLMRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           +F  YL  E+ +  +E LK  + +D +K R
Sbjct: 293 TFLHYLHGELNYPSLEALKAGIDDDVQKLR 322


>gi|325847927|ref|ZP_08170098.1| putative riboflavin biosynthesis protein RibF [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480796|gb|EGC83850.1| putative riboflavin biosynthesis protein RibF [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 213

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 119/210 (56%), Gaps = 6/210 (2%)

Query: 103 SAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID-ELRNNK 161
           S  +FI+++L + L  K VI G  +RFGK   GD   L+K  E + + T  +D EL + K
Sbjct: 2   SPYEFIEEILYKKLNTKYVIVGDNYRFGKMAKGDIKTLKKYEEDFAYKTKVVDFELDDGK 61

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDIL 220
             I++S++IR  +  G +  A   LG+ F ++  VI G + GR L FPTAN++ S     
Sbjct: 62  --IINSTDIRQMVRDGEIEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFKYTT 119

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
            K GVY  +    D+  Y  + + G NPT   N  + +E++I +FS+ IYG+  ++ F +
Sbjct: 120 AKSGVYFTKVNI-DRDFYYALTDIGTNPTF-ENKEIKIETYILNFSKNIYGKNISIEFLE 177

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           YLR + KF   ++L   M +D++  RK++E
Sbjct: 178 YLRSDYKFNSADELIEQMEKDKETGRKLME 207


>gi|309804406|ref|ZP_07698480.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           11V1-d]
 gi|309807188|ref|ZP_07701162.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           03V1-b]
 gi|312871844|ref|ZP_07731929.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           3008A-a]
 gi|312872027|ref|ZP_07732105.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2062A-h1]
 gi|312875708|ref|ZP_07735705.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2053A-b]
 gi|315653439|ref|ZP_07906361.1| riboflavin biosynthesis protein RibF [Lactobacillus iners ATCC
           55195]
 gi|308163521|gb|EFO65794.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           11V1-d]
 gi|308166409|gb|EFO68614.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           03V1-b]
 gi|311088773|gb|EFQ47220.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2053A-b]
 gi|311092440|gb|EFQ50806.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092625|gb|EFQ50984.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           3008A-a]
 gi|315489364|gb|EFU79004.1| riboflavin biosynthesis protein RibF [Lactobacillus iners ATCC
           55195]
          Length = 309

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPQKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPYNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSL 291


>gi|257439278|ref|ZP_05615033.1| riboflavin biosynthesis protein RibF [Faecalibacterium prausnitzii
           A2-165]
 gi|257198153|gb|EEU96437.1| riboflavin biosynthesis protein RibF [Faecalibacterium prausnitzii
           A2-165]
          Length = 306

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 14/297 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTL 72
            H  G  VA+G FDGIH+GH  ++E A++ A  + +   V +F     + ++    + T 
Sbjct: 13  EHEGGTAVAMGYFDGIHIGHRAVIEGAVEWAKAHGAAPAVFTFKLPADSKMKGRRLLSTE 72

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                +  ++  +G    +  +F  E    + EQF+  + V+    + +  G  F FG  
Sbjct: 73  D----KHALIASLGVECYLCPEFE-EIRAMTPEQFVYGI-VQDCHARALFCGENFTFGAK 126

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            AG   +L++     G   V +  +   + + VSS+ IRTAL  G V  A  +LG  + I
Sbjct: 127 AAGTPELLKELCAPLGVEVVVV-PMAQFEEKPVSSTRIRTALEGGDVPAANAMLGMPYAI 185

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V HG  +GRTLG PT N Q+ P    + + G+Y  R R  D T Y      G  PT+
Sbjct: 186 RFAVQHGAGLGRTLGVPTIN-QIYPAGFQMPRYGIYITRTRIGD-TWYPSATGLGTRPTV 243

Query: 251 VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
             +   +  E+FI DFS ++YG    V F+ YL P  KF  +++LK  +    ++A+
Sbjct: 244 NSDETKVTCETFIPDFSGDLYGTDPVVEFYAYLSPSKKFDTLDELKACIDHAARRAK 300


>gi|315655676|ref|ZP_07908574.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii ATCC
           51333]
 gi|315489740|gb|EFU79367.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii ATCC
           51333]
          Length = 331

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 13/308 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           ++I +  P++    +V IG FDG+H GH  I+E+ + +A+   +   VL+F+P PR +  
Sbjct: 1   MQIFRDKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPLPRQVHH 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  +   + +   +E++G       ++ L+ A  S  +F+   LV  L  + V+ G
Sbjct: 61  PDPKNKLICSLADRLTRIEQLGVDTTWVQQYDLDFAAQSPAEFVHNYLVAPLRPEVVVIG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTALTKGHVLNAA 183
              RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G V  AA
Sbjct: 121 EDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQGRVDQAA 180

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT----QDQTSY 238
           ++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R       +T  
Sbjct: 181 YVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPPHSKTPS 240

Query: 239 S-----GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           S        + G +P     G  +    +     ++YG+   + F   +R  + F  ++ 
Sbjct: 241 SLEVVPAAISVGTSPHFGDVGRTVEAHVLGRADLDLYGEEVVIEFVHRIRDNLAFDSLDA 300

Query: 294 LKIYMGED 301
           L   M  D
Sbjct: 301 LLERMDCD 308


>gi|166154314|ref|YP_001654432.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 434/Bu]
 gi|166155189|ref|YP_001653444.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335565|ref|ZP_07223809.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis L2tet1]
 gi|165930302|emb|CAP03788.1| riboflavin kinase [Chlamydia trachomatis 434/Bu]
 gi|165931177|emb|CAP06742.1| riboflavin kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 301

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 139/287 (48%), Gaps = 12/287 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IG FDG HLGH  +L    K    S   V++F+ HP   + S+SP  T++  S++E+I
Sbjct: 20  VTIGFFDGCHLGHQALLSFLTKFPGKS--GVITFSQHPEHTL-SNSPPETIT--SLEERI 74

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L   G   L    F  E AN  AE FIQ +  + L    ++ G   R GK   G    
Sbjct: 75  QLLAGCGIDYLAVLPFNQEIANQEAELFIQSI-YKTLHPSRIVLGYDSRLGKGGLGTAQT 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G     +  L+   + IVSS  IR  L +  + +A   LG  F     V HG
Sbjct: 134 LRPFAASLGISLEEVPPLQIEGT-IVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             IG + G+ T N+ L+   LL  GVY      +   SY+GV N G  PTM  +  L LE
Sbjct: 193 RGIGTSFGYATINLPLTHS-LLPLGVYTCTIVIEG-FSYAGVMNLGMAPTMQRH-QLCLE 249

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + I DFS+++Y +  TV    +LR E  F   ++L + + ED ++AR
Sbjct: 250 AHILDFSEDLYDKSITVILEQFLREEKLFSSKDELVLAIQEDIRQAR 296


>gi|85679169|gb|ABC72001.1| RibC [Listeria monocytogenes]
 gi|85679173|gb|ABC72003.1| RibC [Listeria monocytogenes]
 gi|85679175|gb|ABC72004.1| RibC [Listeria monocytogenes]
 gi|85679177|gb|ABC72005.1| RibC [Listeria monocytogenes]
 gi|85679179|gb|ABC72006.1| RibC [Listeria monocytogenes]
 gi|85679183|gb|ABC72008.1| RibC [Listeria monocytogenes]
 gi|85679185|gb|ABC72009.1| RibC [Listeria monocytogenes]
 gi|187765106|gb|ACD36392.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765168|gb|ACD36423.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765248|gb|ACD36463.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765262|gb|ACD36470.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765266|gb|ACD36472.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765274|gb|ACD36476.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765298|gb|ACD36488.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765326|gb|ACD36502.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765400|gb|ACD36539.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765406|gb|ACD36542.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765412|gb|ACD36545.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765416|gb|ACD36547.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765418|gb|ACD36548.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765424|gb|ACD36551.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765426|gb|ACD36552.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765438|gb|ACD36558.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765454|gb|ACD36566.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765462|gb|ACD36570.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765468|gb|ACD36573.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L +  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|309808388|ref|ZP_07702289.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           01V1-a]
 gi|308168373|gb|EFO70490.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           01V1-a]
          Length = 309

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPQKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSL 291


>gi|89898352|ref|YP_515462.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila felis Fe/C-56]
 gi|89331724|dbj|BAE81317.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56]
          Length = 304

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDG HLGH  +L        +S I  ++F+ HPR I+QS +P       + +E+I
Sbjct: 17  ITIGFFDGCHLGHKKLLSVLSSYPGSSGI--ITFDSHPRAILQSPTPKLI---TNTKERI 71

Query: 82  LEKMGFSA--LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L    FS   L    FT   A+ SAE FI   L + L  K +I G   R GK   G+   
Sbjct: 72  LLLQDFSIDYLCILPFTQSFADKSAESFILS-LHQTLGCKRLILGYDSRLGKGGEGNAQT 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ   +  G   + +   + + ++IVSS  IR  L +G + NA   LG+ +     +  G
Sbjct: 131 LQPLADSLGIEIIEVPPYKID-NEIVSSKRIRQFLVQGDLDNANRHLGHSYKYVGKIETG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             +G  LG  T N+      LL  GVYA     Q +  Y G+ N G  PT+  N  L LE
Sbjct: 190 YGLGTQLGVATINLP-QEQCLLPYGVYACEIEHQAKV-YQGIMNIGEAPTVERNS-LCLE 246

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +FDFS ++YG+  +V    +LR E +F   E L   +  D   A+    +S
Sbjct: 247 AHLFDFSGDLYGEIVSVIPKKFLRQEERFPSQEDLSQAIRTDINNAKAFFSTS 299


>gi|329942814|ref|ZP_08291593.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci Cal10]
 gi|332287406|ref|YP_004422307.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|313847986|emb|CBY16983.1| riboflavin biosynthesis protein [Chlamydophila psittaci RD1]
 gi|325506709|gb|ADZ18347.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|328815074|gb|EGF85063.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci Cal10]
 gi|328914655|gb|AEB55488.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci 6BC]
          Length = 304

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 154/317 (48%), Gaps = 21/317 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +F+++    S+P  +    + IG FDG HLGH    ++ + + ++ P    V++F+ H
Sbjct: 1   MEIFYSL---TSIPRSVDS--ITIGFFDGCHLGH----KKLLTVLSSYPGLSGVITFDLH 51

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  ++QS +P       S +E++L    F    L    FT E AN SAE FI+  L + L
Sbjct: 52  PHAVLQSPTPKLI---TSTKERLLLLQDFPIDYLCILSFTQEFANQSAESFIRS-LHQTL 107

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + +I G   R GK R G+   LQ      G   + +   + ++ +IVSS  IR  L +
Sbjct: 108 RCRRLILGYDSRLGKGREGNAKTLQPLANSLGIEIIEVAPHKIDQ-EIVSSKRIRQFLME 166

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G + NA   LG+ +     +  G  +G  LG  T N+      LL  GVYA        T
Sbjct: 167 GDLDNANRHLGHSYKYVGKIEAGYGLGTQLGVATINLP-QDQCLLPLGVYACEIEYHT-T 224

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N G+ PT+  N  L LE+ +F FS  +YG+  +V    ++R E KF   E L  
Sbjct: 225 IYQGIMNLGKAPTVGRNS-LCLEAHLFGFSGNLYGETVSVIPKKFIRKERKFSSREMLSQ 283

Query: 297 YMGEDEKKARKILESSY 313
            + +D + A+    ++Y
Sbjct: 284 AIQKDIESAKAFFSTNY 300


>gi|255348455|ref|ZP_05380462.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 70]
 gi|255502997|ref|ZP_05381387.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 70s]
          Length = 301

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 141/287 (49%), Gaps = 12/287 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IG FDG HLGH  +L    K  + S   V++F+ HP   + S+SP  T++  S++E+I
Sbjct: 20  VTIGFFDGCHLGHQALLSFLTKFPSKS--GVITFSQHPEHTL-SNSPPETIT--SLEERI 74

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L   G   L    F  E +N  AE FIQ +  + L    ++ G   R GK   G    
Sbjct: 75  QLLAGCGIDYLAVLPFNQEISNQEAEPFIQSI-YKTLRPSRIVLGYDSRLGKGGLGTAQT 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+      G     +  L+   + IVSS  IR  L K  + +A   LG  F+    V HG
Sbjct: 134 LRPFAASLGISLEEVPPLQIEGT-IVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHG 192

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             IG + G+ T N+ L+   LL  GVY      +   SY+GV N G  PTM  +  L LE
Sbjct: 193 RGIGASFGYATINLPLTHS-LLPLGVYTCTIVIEG-FSYAGVMNLGMAPTMQRHQ-LCLE 249

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + I DFS+++Y +  TV    +LR E  F   ++L + + ED ++AR
Sbjct: 250 AHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQEDIRQAR 296


>gi|312873344|ref|ZP_07733397.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2052A-d]
 gi|325912542|ref|ZP_08174929.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           60-B]
 gi|311091134|gb|EFQ49525.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2052A-d]
 gi|325478151|gb|EGC81276.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           60-B]
          Length = 309

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 10/293 (3%)

Query: 7   IEINQSLPNH--LKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           I ++ S+ N       VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +
Sbjct: 4   ILLDNSIDNRKICSNAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKEL 63

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    +   S +   + K     L+   F   T       FI  V++ +     V+
Sbjct: 64  YLDDKKFKYIDTLSEKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVILMF-NPSVVV 122

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  + +G  +  +   L    +  G   + I+     K   + S+ I+ A++ G+V  A
Sbjct: 123 VGYDYTYGPKKIANIQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGV 241
           A LLG  +++   V+HG   G  LGFPTAN+ ++   IL   GVYA +   + +  Y+ +
Sbjct: 181 ADLLGCPYSMSGVVVHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKGKL-YNSM 239

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            + G N T   N    +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 240 TSVGYNDTF-NNNKKTIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSL 291


>gi|319441542|ref|ZP_07990698.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium variabile DSM 44702]
          Length = 340

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 32/329 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSP 68
           + +P  L G VV IG FDG+H GH  ++  A++ A +   P  +++F+PHP    +  + 
Sbjct: 10  EQVPADLAGSVVTIGVFDGVHRGHQRLIASAVQRARDLGVPAVMVTFDPHPTVFFRPEAI 69

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    +     + G  A++   F  E A ++ E++ ++V+V+ L  ++V+ G  F 
Sbjct: 70  PPALASLEQRSVTAARYGIDAMLVINFDRELAGWTPEEYFERVIVDTLHARSVVIGDNFT 129

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK----------SQIVSSSNIRTALTKGH 178
           FG   AG    ++  G+  G   +  D L +              +V S+ IR  L +G 
Sbjct: 130 FGHLAAGTSDTMRTLGDARGVEVITHDLLTDAGDPALGGASAVDHVVCSTWIRDRLAEGD 189

Query: 179 VLNAAHLLGYRFTIESDVI-HGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRT--- 232
           V  A   LG  FT+   V     + G  LGFPTAN+   PD   L  +GVYA   R    
Sbjct: 190 VAAAGRALGRNFTVRGVVTRGAGRGGAALGFPTANLYF-PDAQALPSDGVYAGDLRILPT 248

Query: 233 -QD-----------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
            +D           +       + G NPT   +    +E+F+ D   ++YG++ TVSF +
Sbjct: 249 HKDPAGELVGDMPVEVHMPAAISVGTNPTF-GDETRSVEAFVLDHEADLYGRKVTVSFIE 307

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +R    + D+++L   +  D  + R ++
Sbjct: 308 RIRGMEAYGDLDQLITAINRDVSETRHLV 336


>gi|187765102|gb|ACD36390.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765104|gb|ACD36391.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765108|gb|ACD36393.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765112|gb|ACD36395.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765114|gb|ACD36396.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765130|gb|ACD36404.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765134|gb|ACD36406.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765136|gb|ACD36407.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765138|gb|ACD36408.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765142|gb|ACD36410.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765146|gb|ACD36412.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765148|gb|ACD36413.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765152|gb|ACD36415.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765156|gb|ACD36417.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765158|gb|ACD36418.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765160|gb|ACD36419.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765162|gb|ACD36420.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765164|gb|ACD36421.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765166|gb|ACD36422.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765170|gb|ACD36424.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765174|gb|ACD36426.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765180|gb|ACD36429.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765184|gb|ACD36431.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765196|gb|ACD36437.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765198|gb|ACD36438.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765202|gb|ACD36440.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765204|gb|ACD36441.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765208|gb|ACD36443.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765214|gb|ACD36446.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765216|gb|ACD36447.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765220|gb|ACD36449.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765224|gb|ACD36451.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765228|gb|ACD36453.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765232|gb|ACD36455.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765236|gb|ACD36457.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765238|gb|ACD36458.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765246|gb|ACD36462.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765252|gb|ACD36465.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765256|gb|ACD36467.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765258|gb|ACD36468.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765264|gb|ACD36471.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765272|gb|ACD36475.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765276|gb|ACD36477.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765278|gb|ACD36478.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765286|gb|ACD36482.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765292|gb|ACD36485.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765294|gb|ACD36486.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765302|gb|ACD36490.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765304|gb|ACD36491.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765306|gb|ACD36492.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765308|gb|ACD36493.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765310|gb|ACD36494.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765314|gb|ACD36496.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765316|gb|ACD36497.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765318|gb|ACD36498.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765320|gb|ACD36499.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765322|gb|ACD36500.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765330|gb|ACD36504.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765334|gb|ACD36506.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765336|gb|ACD36507.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765340|gb|ACD36509.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765350|gb|ACD36514.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765362|gb|ACD36520.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765374|gb|ACD36526.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765386|gb|ACD36532.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765392|gb|ACD36535.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765394|gb|ACD36536.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765398|gb|ACD36538.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765408|gb|ACD36543.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765420|gb|ACD36549.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765434|gb|ACD36556.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765440|gb|ACD36559.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765442|gb|ACD36560.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765452|gb|ACD36565.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765456|gb|ACD36567.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765460|gb|ACD36569.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765466|gb|ACD36572.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324151|gb|ADA60617.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324155|gb|ADA60619.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324157|gb|ADA60620.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324159|gb|ADA60621.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324163|gb|ADA60623.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324165|gb|ADA60624.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324173|gb|ADA60628.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324175|gb|ADA60629.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324177|gb|ADA60630.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324179|gb|ADA60631.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324181|gb|ADA60632.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324183|gb|ADA60633.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324185|gb|ADA60634.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324187|gb|ADA60635.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324189|gb|ADA60636.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324191|gb|ADA60637.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324193|gb|ADA60638.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324195|gb|ADA60639.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324197|gb|ADA60640.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324199|gb|ADA60641.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324201|gb|ADA60642.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324203|gb|ADA60643.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324207|gb|ADA60645.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324209|gb|ADA60646.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324211|gb|ADA60647.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324213|gb|ADA60648.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324215|gb|ADA60649.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQAFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLVA-LHVQHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|294994121|ref|ZP_06799812.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 210]
          Length = 291

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 21/293 (7%)

Query: 37  ILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
           ++  A+K   A   P  +++F+PHP  ++   S    L+  + + ++++ +G    +   
Sbjct: 1   MIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMP 60

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--- 151
           FT +    + ++FI ++LVE L V  V+ G  F FGK  AG+   L++ GE++GF     
Sbjct: 61  FTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESM 120

Query: 152 VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
             + E  +N++   SS+ IR+ +  G ++ A   LG    +E  V+ GE  G  LGFPTA
Sbjct: 121 SLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTA 180

Query: 212 NMQLSPDI---LLKEGVYAIRFRTQDQTS----------YSGVANFGRNPTMVPNGPLLL 258
           N  ++P +   +  +GVYA  F                 Y    + G NPT        +
Sbjct: 181 N--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTV 237

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+F+ D + ++YGQ   + F   +R + KF+ + +L   MG D ++AR +L +
Sbjct: 238 EAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLST 290


>gi|319639914|ref|ZP_07994642.1| riboflavin kinase [Bacteroides sp. 3_1_40A]
 gi|317388453|gb|EFV69304.1| riboflavin kinase [Bacteroides sp. 3_1_40A]
          Length = 247

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 10/223 (4%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS 67
           +Q+LP      V  IG FDG+H GH  ++ Q  ++A    +   +++F  HPR +IQ++ 
Sbjct: 9   HQTLPP----SVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVHPRQVIQTAY 64

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               LS P+ + ++LE M         FT E + +SA +F+Q +L     + T++ G   
Sbjct: 65  RPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQ-LLRNKFNIHTLVIGYDH 123

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG +R+ +     + GE+   + V      + + +I SSS IR  L +G V  AA  LG
Sbjct: 124 RFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGKI-SSSVIRQLLKEGKVSQAAKFLG 182

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAI 228
           Y + ++  V+ G K+GR +GFPTAN+Q+  S  ++  EGVYA+
Sbjct: 183 YNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAV 225


>gi|187765110|gb|ACD36394.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765128|gb|ACD36403.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765154|gb|ACD36416.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765234|gb|ACD36456.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765270|gb|ACD36474.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765280|gb|ACD36479.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765288|gb|ACD36483.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765296|gb|ACD36487.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765354|gb|ACD36516.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765458|gb|ACD36568.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L K  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|187765390|gb|ACD36534.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765448|gb|ACD36563.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 122/215 (56%), Gaps = 6/215 (2%)

Query: 52  VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL+F+PHP  ++ +    +  L+P   +   + ++G   +   +FT + +  S + F+  
Sbjct: 3   VLTFDPHPSVVLSNIRKQVKYLTPLEDKAGKMAELGVDIMYVVRFTTQFSELSPQSFVDN 62

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            LV  L V+ V+ G  + +GK   G    L +  +  G   V I + +   S  +SS+NI
Sbjct: 63  YLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYAD--GRFEVTIVDKQTAASDKISSTNI 119

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++
Sbjct: 120 RRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVK 179

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           FR   +T + G+A+ G N T   +  L +E +I D
Sbjct: 180 FRVNGET-HLGMASIGYNITFKDDQALSIEVYILD 213


>gi|227875836|ref|ZP_03993962.1| FMN adenylyltransferase / riboflavin kinase [Mobiluncus mulieris
           ATCC 35243]
 gi|269977472|ref|ZP_06184444.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris 28-1]
 gi|306819117|ref|ZP_07452831.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris ATCC
           35239]
 gi|227843584|gb|EEJ53767.1| FMN adenylyltransferase / riboflavin kinase [Mobiluncus mulieris
           ATCC 35243]
 gi|269934388|gb|EEZ90950.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris 28-1]
 gi|304648093|gb|EFM45404.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris ATCC
           35239]
          Length = 332

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
           ++I    P+     VV IG FDG+H+GH  I+ Q +++A  + +    L+F+P PR + Q
Sbjct: 2   VQIFHESPSKFGPSVVTIGTFDGVHMGHQQIIRQVVELARENHLNSLALTFDPLPRQVHQ 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            S     +     +   L  +G  A     + L+ A  + + F+ K LVE L+ + ++ G
Sbjct: 62  PSPGNKLICTLGDRLLFLAALGLDATWVQHYDLDFAALTPKDFVVKCLVEPLQPRIIVVG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
              RFG   +G+   L + G KYGF   V  D +    S+  SSS +R  L  G+V  A 
Sbjct: 122 KDTRFGAQNSGNIVTLTELGAKYGFAVQVVPDIIDPITSKRWSSSWVRRLLEAGNVDQAG 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR------TQDQT 236
           ++LG    +   V+HG++ GR LGFPTAN+     + +  +GVYA   R      +   T
Sbjct: 182 YVLGRPHQVRGLVVHGKQRGRQLGFPTANLDAEYVEAIPADGVYAGWVRRAYPHGSNHPT 241

Query: 237 SYSGVA---NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           S   +    + G +P     G  +    +      +YG+   V F   +R    F+ ++ 
Sbjct: 242 SLEALPAAISVGTSPHFGDVGRTVEAHVLGRSDLNLYGEEIVVQFVHRIRENRAFESLDA 301

Query: 294 LKIYMGEDEKKARKIL 309
           L   M +D  +   +L
Sbjct: 302 LLSRMDQDLLETATVL 317


>gi|329919850|ref|ZP_08276788.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           1401G]
 gi|328936940|gb|EGG33370.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           1401G]
          Length = 309

 Score =  119 bits (297), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 8/279 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KIA++   P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKKFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+   F   T       FI  V++ +     V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVILMF-NPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K   + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   + +  Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKGKL-YNSMTSVGYNDTF-NNNK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +E++IFDF ++IY ++  + +++++R  IKF DI  L
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSL 291


>gi|293611282|ref|ZP_06693580.1| hypothetical protein HMPREF0013_03445 [Acinetobacter sp. SH024]
 gi|292826533|gb|EFF84900.1| hypothetical protein HMPREF0013_03445 [Acinetobacter sp. SH024]
          Length = 333

 Score =  119 bits (297), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L  +G   +   KF     + SA  F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAALGVDYIAVAKFDEHFRSMSASAFAD-LLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QSLVLGDDFHFGKDRQGNSEFLKDYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--- 234
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +    +    
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 235 ------------------QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                             + S  G  + G  P +    P   LE    D S  +YG    
Sbjct: 232 TEKVRQETPEKLGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|225868637|ref|YP_002744585.1| riboflavin biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701913|emb|CAW99421.1| putative riboflavin biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 310

 Score =  119 bits (297), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
           H+    EI++S        V+ +G FDG+H GH  + ++A +I+      I  L+F+  P
Sbjct: 5   HIKSYQEIDESADT-----VLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHESP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKM---GFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +      SP F L   +  EK  EK    G   L    FT   +  S++ FI   +   L
Sbjct: 60  QLAFTRFSPDF-LQHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHYIGR-L 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             + ++ G  + FG D A D   L KR  G  Y    V  D+++      +SS+ IR+ +
Sbjct: 118 RARHIVVGFDYHFGCDHA-DSHYLAKRIKGTVYSISEVKEDQIK------ISSTRIRSLI 170

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
             G V  A  LLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY      +
Sbjct: 171 KAGDVAKANQLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVR 230

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  Y  + + G+N T      L LE+ IF F+++IYG+   + + D +R   KF D+  
Sbjct: 231 GE-RYRSMTSIGKNITF-GGKDLRLEANIFGFNEDIYGETLEIIWLDRIREMTKFSDVST 288

Query: 294 LKIYMGEDEKKA 305
               + +D++ A
Sbjct: 289 FISQLKQDKEAA 300


>gi|307700014|ref|ZP_07637063.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris FB024-16]
 gi|307614775|gb|EFN93995.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris FB024-16]
          Length = 331

 Score =  119 bits (297), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +FH        P+     VV IG FDG+H+GH  I+ Q +++A  + +    L+F+P 
Sbjct: 1   MQIFHES------PSKFGPSVVTIGTFDGVHMGHQQIIRQVVELARENHLNSLALTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q S     +     +   L  +G  A     + L+ A  + + F+ K LVE L+ 
Sbjct: 55  PRQVHQPSPGNKLICTLGDRLLFLAALGLDATWVQHYDLDFAALTPKDFVVKCLVEPLQP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G   RFG   +G+   L + G KYGF   V  D +    S+  SSS +R  L  G
Sbjct: 115 RIIVVGKDTRFGAQNSGNIVTLTELGAKYGFAVQVVPDIIDPITSKRWSSSWVRRLLEAG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR----- 231
           +V  A ++LG    +   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 NVDQAGYVLGRPHQVRGLVVHGKQRGRQLGFPTANLDAEYVEAIPADGVYAGWVRRAYPH 234

Query: 232 -TQDQTSYSGVA---NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
            +   TS   +    + G +P     G  +    +      +YG+   V F   +R    
Sbjct: 235 GSNHPTSLEALPAAISVGTSPHFGDVGRTVEAHVLGRSDLNLYGEEIVVQFVHRIRENRA 294

Query: 288 FKDIEKLKIYMGEDEKKARKIL 309
           F+ ++ L   M +D  +   +L
Sbjct: 295 FESLDALLSRMDQDLLETATVL 316


>gi|224993266|gb|ACN76320.1| RibC [Listeria monocytogenes]
 gi|224993288|gb|ACN76331.1| RibC [Listeria monocytogenes]
 gi|224993292|gb|ACN76333.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + K+G   +   
Sbjct: 1   VIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +  G   V 
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|213423835|ref|ZP_03356815.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 193

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 2/189 (1%)

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF             +I S
Sbjct: 1   FISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-S 59

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVY
Sbjct: 60  STAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVY 119

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
           A+           GVAN G  PT V      LE  + D   ++YG+   V     +R E 
Sbjct: 120 AVEVTGLGDKPLPGVANIGTRPT-VAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQ 178

Query: 287 KFKDIEKLK 295
           +F  +++LK
Sbjct: 179 RFASLDELK 187


>gi|281491623|ref|YP_003353603.1| riboflavin kinase/ FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375341|gb|ADA64854.1| Riboflavin kinase/ FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 300

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 18/292 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFTEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPEMLLKLTSDE 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  + G   L+   FT   A+ ++ +F + V V+    K VITG  +  G D    
Sbjct: 77  KRAELFAENGVDYLVFKDFTSNFAHQTSTEFAESV-VKRFNPKVVITGFDYTTGSDMKN- 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                K  E Y    V + E  +   +I SS+ IR A+ +G +  A  LLGY +     V
Sbjct: 135 ----LKSTEDY--RVVIMPEKADEHGKI-SSTRIRKAVEEGDIAQANELLGYSYETRGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG- 254
           +HG   GR LG+PTAN+ +   + L   GVY        +  + G A+ G N T   NG 
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVIFAGE-RHRGFASIGYNDTF--NGT 244

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              +E  IFDF+ EIYG++ TV + D +R  IKF  I++L   M EDE+ AR
Sbjct: 245 EKTVEVHIFDFNGEIYGEKLTVLWLDKIRDMIKFDGIDQLIKQMKEDEQIAR 296


>gi|116511974|ref|YP_809190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris SK11]
 gi|116107628|gb|ABJ72768.1| FAD synthase [Lactococcus lactis subsp. cremoris SK11]
          Length = 300

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFAEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPDMLLKLTSDK 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  + G   L+   FT + A+ ++ +F + V++ +   K VITG  +  G D    
Sbjct: 77  KRAELFAENGVDYLVFKDFTSKFAHQTSTEFAKSVVMRF-NPKVVITGFDYTTGSD---- 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++       +  V + E  + + +I SS+ IR A+  G +  A  LLGY +     V
Sbjct: 132 ---MKNLESTEDYRVVIMPEKADEQGKI-SSTRIRKAVEAGDIAQANQLLGYSYETTGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GR LG+PTAN+ +   + L   GVY        +  + G A+ G N T   NG 
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVLFAGE-RHRGFASIGYNDTF--NGT 244

Query: 256 L-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              +E  IFDF+ EIYG+  TV + D +R  IKF+ I++L   M EDE+ AR
Sbjct: 245 ENTVEVHIFDFNGEIYGENLTVLWLDKIRDMIKFEGIDQLIDQMKEDEQIAR 296


>gi|125624241|ref|YP_001032724.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|42405316|gb|AAS13486.1| riboflavin kinase [Lactococcus lactis subsp. cremoris NZ9000]
 gi|124493049|emb|CAL98012.1| riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071020|gb|ADJ60420.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 300

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFAEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPDMLLKLTSDK 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  + G   L+   FT + A+ ++ +F + V++ +   K VITG  +  G D    
Sbjct: 77  KRAELFAENGVDYLVFKDFTSKFAHQTSTEFAKSVVMRF-NPKVVITGFDYTTGSD---- 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++       +  V + E  + + +I SS+ IR A+  G +  A  LLGY +     V
Sbjct: 132 ---MKNLESTEDYRVVIMPEKADEQGKI-SSTRIRKAVEAGDIAQANQLLGYSYETTGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GR LG+PTAN+ +   + L   GVY        +  + G A+ G N T   NG 
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVLFAGE-RHRGFASIGYNDTF--NGT 244

Query: 256 -LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              +E  IFDF+ EIYG+  TV + D +R  IKF+ I++L   M EDE+ AR
Sbjct: 245 EKTVEVHIFDFNGEIYGENLTVLWLDKIRDMIKFEGIDQLIDQMKEDEQIAR 296


>gi|289570965|ref|ZP_06451192.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T17]
 gi|289544719|gb|EFD48367.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T17]
          Length = 318

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 22/292 (7%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S   
Sbjct: 10  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPA 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  V+ G  F FG
Sbjct: 70  QLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G ++ A   LG
Sbjct: 130 KKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALG 189

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS------- 237
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 190 RPHRVEGVVVRGEGRGAALGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVP 247

Query: 238 ---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF-FDYLRPE 285
              Y    + G NPT        +E+F+ D + ++YGQ   +     Y RPE
Sbjct: 248 GERYQAAVSVGTNPTFSGR-TRTVEAFVLDTTADLYGQHVALGLRRAYPRPE 298


>gi|325124002|gb|ADY83525.1| bifunctional protein ribF [Acinetobacter calcoaceticus PHEA-2]
          Length = 333

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   PN  L    V IGNFDG+HLGH  ++ Q   IA    +   V+ F P P    
Sbjct: 4   LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKNIAAAQGLKTLVMIFEPQPLEFF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF     + SA +F   +L + L  
Sbjct: 64  KGYD-----APPRINSLREKVEYLAELGVDYIAVAKFDEHFRSMSASEFAD-LLKDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FGKDR G+   L+  G +    HT+ ++  R      VSS+ IR  L  G
Sbjct: 118 QALVLGDDFHFGKDRQGNSEFLKDYGFQVTNLHTIELEGER------VSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--- 234
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +    +    
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 235 ------------------QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                             + S  G  + G  P +    P   LE    D S  +YG    
Sbjct: 232 TEKVRQETPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           V+F  YL  E+ +  +E LK  +  D ++ R+
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQ 323


>gi|312866176|ref|ZP_07726397.1| riboflavin biosynthesis protein RibF [Streptococcus downei F0415]
 gi|311098580|gb|EFQ56803.1| riboflavin biosynthesis protein RibF [Streptococcus downei F0415]
          Length = 305

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 13/292 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT--LSPPS 76
           V+ +G FD +H GH ++ ++A +IA      I VL+F   P+ +     P     ++ P 
Sbjct: 19  VLVLGYFDALHQGHKVLFDRAKEIAKEKHLKIAVLTFFESPKLVFSRFEPDLLKHITYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +     + G   L    FT   +  S++ FI K  +  L+ K ++ G  ++FG +R   
Sbjct: 79  KRYAKFAEYGVDYLYLTNFTSAFSKVSSDDFI-KNYIGGLKAKALVVGFDYKFGHNRTDA 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +++     +    + + ++  +  Q +SS+ IR  + +G++     LLGY F+    V
Sbjct: 138 DYLVRN----FPGQVLTVPQVSQD-GQKISSTRIRGLIAQGNIAQVNQLLGYEFSTRGIV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+GFPTAN+  L    L  +GVY      + +  Y  + + G+N T      
Sbjct: 193 VHGDARGRTIGFPTANLAPLDATFLPADGVYVTDVLLKGR-RYRAMTSIGKNVTF-GGTE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           L LE+ +FDFS +IYG++  + + D +R  +KF  I++L   + +D+K A++
Sbjct: 251 LRLEANLFDFSGDIYGEQLELIWLDKIREMVKFNGIDELVDQLHKDQKIAQE 302


>gi|15673109|ref|NP_267283.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12724088|gb|AAK05225.1|AE006345_5 riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406676|gb|ADZ63747.1| riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 300

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 141/292 (48%), Gaps = 18/292 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFTEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPEMLLKLTSDE 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +  + G   L+   FT   A+ ++ +F + V V+    K VITG  +  G D    
Sbjct: 77  KRADLFAENGVDYLVFKDFTSNFAHQTSTEFAESV-VKRFNPKVVITGFDYTTGSDMKN- 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
                K  E Y    V + E  +   +I SS+ IR A+ +G +  A  LLGY +     V
Sbjct: 135 ----LKSTEDY--RVVIMPEKADEHGKI-SSTRIRKAVEEGDIAQANELLGYSYETRGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG- 254
           +HG   GR LG+PTAN+ +   + L   GVY        +  + G A+ G N T   NG 
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVIFAGE-RHRGFASIGYNDTF--NGT 244

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
              +E  IFDF+ EIYG++ TV + D +R  IKF  I++L   M EDE+ AR
Sbjct: 245 EKTVEVHIFDFNGEIYGEKLTVLWLDKIRDMIKFDGIDQLIKQMKEDEQIAR 296


>gi|328955629|ref|YP_004372962.1| FMN adenylyltransferase; riboflavin kinase [Coriobacterium
           glomerans PW2]
 gi|328455953|gb|AEB07147.1| FMN adenylyltransferase ;riboflavin kinase [Coriobacterium
           glomerans PW2]
          Length = 338

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 10/309 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           +   VAIG FDG+H+GH  ++ QA+  A +  I+  V++F+P P  I+  + P   L   
Sbjct: 34  RAAAVAIGVFDGVHIGHRDLIAQAVARARDQGISAVVVTFDPDPDRIV-CAEPAPELMTT 92

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L  +G   ++   FT E A     +F ++VL+  + ++++  G  FR G   A 
Sbjct: 93  RDRLRQLATLGVDGVLVIPFTRELAALDHVRFFEEVLLRSVRLRSIHVGADFRLGAHGAA 152

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               ++      G   V   EL +     V++S IR  +    +  A+  LG R+ +   
Sbjct: 153 SVERIRAWCAPRGID-VCARELVSLGGAPVTASRIRRLIRDAEIKEASACLGRRYLVRGR 211

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V  G   G  +GFPTAN++++P++ L  +GVYA  F + D   +    N G  P M  + 
Sbjct: 212 VATGRGEGTGMGFPTANVRVAPEMALPADGVYA-GFASVDGCVWPAAINIG-VPPMFRDD 269

Query: 255 P--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL-ES 311
           P    LE+ +  FS ++YG+R  ++    LR    F  IE L   +  D  + R  L ES
Sbjct: 270 PRSAHLEATLLGFSGDLYGRRIALTIDRRLRAAEVFPSIEDLTAQVLADIDRVRADLGES 329

Query: 312 SYPLSERDR 320
              L +  R
Sbjct: 330 GVDLDDDHR 338


>gi|262377099|ref|ZP_06070324.1| riboflavin biosynthesis protein RibF [Acinetobacter lwoffii SH145]
 gi|262307837|gb|EEY88975.1| riboflavin biosynthesis protein RibF [Acinetobacter lwoffii SH145]
          Length = 333

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 42/314 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP--- 75
            V IGNFDG+HLGH  ++ Q  ++A    +   V+ F P P    Q        +PP   
Sbjct: 19  AVTIGNFDGVHLGHQAMIRQLQQVAKAQGLKSVVMIFEPQPLEYFQGYD-----APPRIS 73

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           S++EK+  L ++G   +   KF     + +AE F   +L E L  + ++ G  F FGK+R
Sbjct: 74  SLREKVEYLTELGVDYIAVAKFDHTFRSLTAEAFAD-ILKEKLNARHLVLGDDFHFGKNR 132

Query: 134 AGDRGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            G+   L+  G E    +T+ +D  R      VSS+ IR  L  G +  AA LLG  ++I
Sbjct: 133 QGNSEFLRNYGFEVTNLNTIALDGER------VSSTRIRQTLQAGDLALAAQLLGRPYSI 186

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF--RTQ----------------- 233
              V +G++IGRT+ FPT N++L+      +G+Y +     TQ                 
Sbjct: 187 TGRVQYGDQIGRTIDFPTINVRLNRHKPCLKGIYGVEVICETQSLKDKVKADSATQTGIA 246

Query: 234 --DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
             D T+  G  + G  P +    P   LE    + S  +YG    V+F +YL  E  +  
Sbjct: 247 GYDPTALFGAGHVGTRPAIKQAHPEWRLEVHFPNVSANLYGLLMRVTFLNYLHGEKDYPS 306

Query: 291 IEKLKIYMGEDEKK 304
           +E LK  + +D +K
Sbjct: 307 LEALKAGIDDDVEK 320


>gi|219558795|ref|ZP_03537871.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T17]
          Length = 386

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 22/292 (7%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP  ++   S   
Sbjct: 78  IPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPA 137

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  V+ G  F FG
Sbjct: 138 QLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFG 197

Query: 131 KDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           K  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G ++ A   LG
Sbjct: 198 KKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALG 257

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTS------- 237
               +E  V+ GE  G  LGFPTAN  ++P +   +  +GVYA  F              
Sbjct: 258 RPHRVEGVVVRGEGRGAALGFPTAN--VAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVP 315

Query: 238 ---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF-FDYLRPE 285
              Y    + G NPT        +E+F+ D + ++YGQ   +     Y RPE
Sbjct: 316 GERYQAAVSVGTNPTFSGR-TRTVEAFVLDTTADLYGQHVALGLRRAYPRPE 366


>gi|332523748|ref|ZP_08400000.1| riboflavin biosynthesis protein RibF [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315012|gb|EGJ27997.1| riboflavin biosynthesis protein RibF [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 304

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN--PHPRTIIQSSSPIFTLS---PP 75
           V+ +G FDG+H GH  + ++A  IA    + V++F     P+       P   L    P 
Sbjct: 19  VLVLGYFDGLHRGHKALFDRAQAIAAKESLKVVTFTFTESPKLAFARFEPELLLHIVYPD 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
              EK  E  G  +L    FT   +  +++ FI++ +   L  K +I G  ++FG +R  
Sbjct: 79  KRYEKFAE-YGVDSLYLVDFTTAFSKITSDDFIKEYIGR-LNAKHIIVGFDYKFGHNRTN 136

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +  +R      HT  I+E+     +I SS+ IR  + KG V     LLGY F+    
Sbjct: 137 SDYL--QRNFAGTVHT--IEEISYEDRKI-SSTWIRELIKKGDVAKVNQLLGYEFSTRGM 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRTLGFPTAN+  +    L  +GVY        Q  Y  + + G+N T     
Sbjct: 192 VVHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVMVNGQ-RYRSMTSIGKNITF-GGT 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            L LE+ IFDF +EIYG+   + + + +R   KF+ IE L
Sbjct: 250 ELRLEANIFDFDREIYGESIEIIWLEKIREMTKFEGIEDL 289


>gi|29840224|ref|NP_829330.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila caviae GPIC]
 gi|29834572|gb|AAP05208.1| riboflavin biosynthesis protein RibF [Chlamydophila caviae GPIC]
          Length = 304

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 12/294 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK- 80
           + IG FDG HLGH  +L      +  S I  ++F+ HPR+I+Q S P       S +E+ 
Sbjct: 17  ITIGFFDGCHLGHKQLLTVLSSYSGTSGI--ITFDLHPRSILQPSLPKLI---TSTRERF 71

Query: 81  -ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L+      L    F+   A+ SAE FI   L + L+ K +I G   + GKD  GD   
Sbjct: 72  LLLQDFQIDYLYILPFSKSFADQSAESFILS-LHQILKCKRLILGYDSKLGKDGQGDAVT 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+   +  G   + +   + + ++IVSS  IR  L +G + +A   LG+ +     +  G
Sbjct: 131 LKPLADSLGIEIIEVPPYKID-NEIVSSKRIRQFLIQGDLDSANRHLGHSYKYVGKIETG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             +G  LG  T N+      LL  GVYA      +  +Y G+ N G  PT+  N  L LE
Sbjct: 190 YGLGIQLGVATINLP-QEQCLLPYGVYACEIE-HNSITYQGIMNLGEAPTVGRNS-LCLE 246

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           + +FDFS  +YG+  +V    +LR E KF   E L   + +D  +A+    ++Y
Sbjct: 247 AHLFDFSGNLYGETVSVIPRKFLREEKKFPSREDLSKAIRKDIAEAKAFFTTNY 300


>gi|332638623|ref|ZP_08417486.1| FAD synthase [Weissella cibaria KACC 11862]
          Length = 313

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSI 77
           V+A+G FDG+H GH  ++ +A     A +  + VL+++ H   +  +   P+  L+    
Sbjct: 21  VLAMGFFDGVHAGHRAVINRAKAEATARSVKLAVLTYDQHASVVFTAHQHPLTYLTTLPR 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRAGD 136
           +  +L +MG        FT   A  +   F+++ ++  L    V+ G    +G  D   D
Sbjct: 81  KLTLLAEMGVDVAYVVNFTSALAKLAPADFVEQYMI-GLRATAVVAGFDHTYGASDAQAD 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L   G   G   V      +   +  +S+  R  +  G V     LL   +     V
Sbjct: 140 MSHLP--GYAAGRFDVIEVSRVDVDGEESASTRARQLVDAGQVDALNELLTQPYQTSGVV 197

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HGE  GR +G+PTAN++ +P + L   GVY +      +  Y G+A+ G N T   N P
Sbjct: 198 VHGEARGREMGYPTANIETTPGERLPGVGVYVVELEIAGKW-YGGMASIGYNVTFGENRP 256

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +E  +FDF+QEIYG+R  V +  Y+R E KF  ++ L   + EDE  +R+ L
Sbjct: 257 KTVEINLFDFAQEIYGERVNVRWHHYIRGEEKFTGMDALIAKLQEDESVSRRFL 310


>gi|288925360|ref|ZP_06419294.1| riboflavin biosynthesis protein RibF [Prevotella buccae D17]
 gi|288337831|gb|EFC76183.1| riboflavin biosynthesis protein RibF [Prevotella buccae D17]
          Length = 315

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 143/297 (48%), Gaps = 7/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ + I  A    +  TV++F+ HPR ++QS      LS  S +
Sbjct: 17  VATIGFFDGVHRGHQYLIRKLIADARAEGMESTVITFDLHPRKVLQSDYQPRMLSTLSEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L K          F  E A  +A +F++++L + L V+ +  G   RFG DR     
Sbjct: 77  LLLLSKTSVDNTALLHFDEEMARMTAREFMEQILRDKLNVRKLYIGYDHRFGHDRKEGFD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G + G   V       N    VSSS +R+ L  G V  A   LGY +TI   V+ 
Sbjct: 137 DYVRYGRELGMEVVLSQAFELN-GVNVSSSVVRSFLEAGEVEMAEMCLGYPYTIVGKVVK 195

Query: 199 GEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS-GVANFGRNPTMVPNGP 255
           G + GR +GFPTAN+  +    ++   GVYA++ R ++       + N G  PT      
Sbjct: 196 GYQEGRKMGFPTANLDTTGFDKLIPAPGVYAVKARLENSMEMKRAMMNIGVRPTF-GGTE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LE++I +F ++IYG+   VSF   +R E +F   E L+  +  DEK   +  E  
Sbjct: 255 TTLETYILNFGEDIYGKMMLVSFAHRIREEQRFPSAEALREQLERDEKMVEEQFEKD 311


>gi|315606763|ref|ZP_07881773.1| riboflavin biosynthesis protein RibF [Prevotella buccae ATCC 33574]
 gi|315251618|gb|EFU31597.1| riboflavin biosynthesis protein RibF [Prevotella buccae ATCC 33574]
          Length = 315

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 143/297 (48%), Gaps = 7/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++ + I  A    +  TV++F+ HPR ++QS      LS  S +
Sbjct: 17  VATIGFFDGVHRGHQYLIRKLIADARAEGMESTVITFDLHPRKVLQSDYQPRMLSTLSEK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L K          F  E A  +A +F++++L + L V+ +  G   RFG DR     
Sbjct: 77  LLLLSKTSVDNTALLHFDEEMARMTAREFMEQILRDKLNVRKLYIGYDHRFGHDRKEGFD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + G + G   V       N    VSSS +R+ L  G V  A   LGY +TI   V+ 
Sbjct: 137 DYVRYGRELGMEVVLSQAFELN-GVNVSSSVVRSFLEAGEVEMAEMCLGYPYTIVGKVVK 195

Query: 199 GEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS-GVANFGRNPTMVPNGP 255
           G + GR +GFPTAN+  +    ++   GVYA++ R ++       + N G  PT      
Sbjct: 196 GYQEGRKMGFPTANLDTTGFDKLIPAPGVYAVKARLENSMEMKRAMMNIGVRPTF-GGTE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LE++I +F ++IYG+   VSF   +R E +F   E L+  +  DEK   +  E  
Sbjct: 255 TTLETYILNFGEDIYGKMMLVSFAHRIREEQRFPSAEALREQLERDEKMVEEQFEKD 311


>gi|295112225|emb|CBL28975.1| riboflavin kinase/FMN adenylyltransferase/tRNA pseudouridine 55
           synthase [Synergistetes bacterium SGP1]
          Length = 639

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 136/298 (45%), Gaps = 10/298 (3%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII-QSSSPIF 70
           P   +G + AIG FDG H GH  +LE+A  +A   +     ++F PHP   + +  + +F
Sbjct: 309 PAVARGPIFAIGAFDGFHRGHARLLERARDLAALLDEDWGAVTFEPHPGVFLGKLDATLF 368

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           TL    +  ++L       L+   F  E  + S   F ++ L     V  V+ G  FRFG
Sbjct: 369 TLRERELIRRVLR---VPRLLVLNFDEEVRDLSPSDFWRR-LRGTFPVGGVVVGRNFRFG 424

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + + G    L       G     + EL       +SS+ +R A+ +G    AA +LG+ +
Sbjct: 425 RGQEGTAEALISLCRDDGLPAEAV-ELLTCGGLRLSSTEVRRAVMEGDAALAAKVLGFPW 483

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPT 249
                V+HG+  G  LGFPTAN+ LS  +    EGVYA       +  + G  + G NPT
Sbjct: 484 FFWGAVVHGDWRGHELGFPTANVDLSKALTRPGEGVYAALVPIGGRW-HCGALSVGGNPT 542

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                    E F+ DF  ++YG+   V     LRP  +F D + L   +  D ++ R+
Sbjct: 543 FGDVRETRAEVFLLDFEGDLYGRDLPVFLIRRLRPMTRFPDAQALAAQIARDVERCRE 600


>gi|62185077|ref|YP_219862.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila abortus S26/3]
 gi|62148144|emb|CAH63901.1| riboflavin biosynthesis protein [Chlamydophila abortus S26/3]
          Length = 304

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 142/296 (47%), Gaps = 16/296 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V IG FDG HLGH  +L         S   V++F+ HP+ ++Q  +P       S +E++
Sbjct: 17  VTIGFFDGCHLGHKKLLTVLSSYPGLS--GVITFDLHPQAVLQFPAPKLI---TSTKERL 71

Query: 82  LEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L    F    L    FT   AN SAE FI+  L + L  K +I G   + GK   G+   
Sbjct: 72  LLLQDFPIDYLCILSFTQRFANQSAESFIRS-LHQTLRCKRLILGYDSKLGKGGEGNATT 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ      G   + +   + ++ +IVSS  IR  L +G + NA   LG+ +     +  G
Sbjct: 131 LQPLANSLGIEIIEVAPHKIDQ-EIVSSKRIRQFLMQGDLDNANRHLGHSYKYLGTIEAG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             +G  LG  T N+      LL  GVYA  I +RT   T Y G+ N G+ PT+  N  L 
Sbjct: 190 YGLGTQLGVATINLP-QEQCLLPYGVYACAIDYRT---TIYQGIMNLGKAPTVGRNS-LC 244

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           LE+ +FDFS  +YG+  +V    ++R E KF   E L   + +D   A+    ++Y
Sbjct: 245 LEAHLFDFSGNLYGETVSVIPKKFIRKERKFPSREMLSQAIRKDIDSAKAFFSTNY 300


>gi|195978033|ref|YP_002123277.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974738|gb|ACG62264.1| riboflavin biosynthesis protein RibC [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 310

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
           H+    EI++S        V+ +G FDG+H GH  + ++A +I+      I  L+F+  P
Sbjct: 5   HIKSYQEIDESADT-----VLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHESP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKM---GFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +      SP F L   +  EK  EK    G   L    FT   +  S++ FI   +   L
Sbjct: 60  QLAFTRFSPDF-LQHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHYIGR-L 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             + ++ G  ++FG D A D   L KR  G  Y    V  D+++      +SS+ IR+ +
Sbjct: 118 RARHIVVGFDYQFGCDHA-DSHYLAKRIKGTVYSISEVKEDQIK------ISSTRIRSLI 170

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
             G V  A  LLGY  +    V+HG+  GRT+GF TAN+  +    L  +GVY      +
Sbjct: 171 KAGDVAKANQLLGYELSTRGMVVHGDARGRTIGFSTANLAPIDRTYLPADGVYVTDVLVR 230

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  Y  + + G+N T      L LE+ IF F+++IYG+   + + D +R   KF D+  
Sbjct: 231 GE-RYRSMTSIGKNITF-GGKELRLEANIFGFNEDIYGETLEIIWLDRIREMTKFSDVST 288

Query: 294 LKIYMGEDEKKA 305
               + +D++ A
Sbjct: 289 FIHQLKQDKEAA 300


>gi|262380685|ref|ZP_06073838.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SH164]
 gi|262297633|gb|EEY85549.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SH164]
          Length = 333

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 41/328 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII 63
           + +N  +P+  L    V IGNFDG+HLGH  ++ Q   +A   N    V+ F P P    
Sbjct: 4   LRLNALMPDFQLPATAVTIGNFDGVHLGHQAMIAQLKTVAAQKNLKTLVMLFEPQPLEYF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF  +  + SAE F   +L + L  
Sbjct: 64  KGYE-----APPRISSLREKVEYLTELGVDYIAVAKFDDQFRSMSAEGF-ASLLKDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +++ G  F FGK+R G+   L+     YGF    ++ + + + + VSS+ IR  L +G 
Sbjct: 118 HSLVLGDDFHFGKNRQGNSEFLKN----YGFAVTNLNTV-DFQGERVSSTRIRQVLQQGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-- 236
           +  AA LLG  +++   + +G++IGRTL FPT N+ ++       G+YA+   ++  +  
Sbjct: 173 LTLAAQLLGRPYSMVGRIQYGDQIGRTLNFPTINVGMNRHKPCLHGIYAVEVISEHNSLA 232

Query: 237 -------------------SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
                              S  G  + G  P +    P   LE    + S  +YG    V
Sbjct: 233 ARVRLEHPDLPGIAGYGPESLFGAGHVGTRPAIQQQQPEWRLEVHFPEVSANLYGLLVRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           +F  YL  E+ +  +E LK  +  D  K
Sbjct: 293 TFLKYLHGEVNYPSLEALKTGIDNDVAK 320


>gi|255320683|ref|ZP_05361860.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SK82]
 gi|255302299|gb|EET81539.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SK82]
          Length = 348

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 41/328 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII 63
           + +N  +P+  L    V IGNFDG+HLGH  ++ Q   +A   N    V+ F P P    
Sbjct: 19  LRLNALMPDFQLPATAVTIGNFDGVHLGHQAMIAQLKTVAAQKNLKTLVMLFEPQPLEYF 78

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF  +  + SAE F   +L + L  
Sbjct: 79  KGYE-----APPRISSLREKVEYLTELGVDYIAVAKFDDQFRSMSAEGF-ASLLKDKLHA 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +++ G  F FGK+R G+   L+     YGF    ++ + + + + VSS+ IR  L +G 
Sbjct: 133 HSLVLGDDFHFGKNRQGNSEFLKN----YGFAVTNLNTV-DFQGERVSSTRIRQVLQQGD 187

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-- 236
           +  AA LLG  +++   + +G++IGRTL FPT N+ ++       G+YA+   ++  +  
Sbjct: 188 LTLAAQLLGRPYSMVGRIQYGDQIGRTLNFPTINVGMNRHKPCLHGIYAVEVISEHNSLA 247

Query: 237 -------------------SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
                              S  G  + G  P +    P   LE    + S  +YG    V
Sbjct: 248 ARVRLEHPDLPGIAGYGPESLFGAGHVGTRPAIQQQQPEWRLEVHFPEVSANLYGLLVRV 307

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           +F  YL  E+ +  +E LK  +  D  K
Sbjct: 308 TFLKYLHGEVNYPSLEALKTGIDNDVAK 335


>gi|294675249|ref|YP_003575865.1| riboflavin biosynthesis protein RibF [Prevotella ruminicola 23]
 gi|294473324|gb|ADE82713.1| riboflavin biosynthesis protein RibF [Prevotella ruminicola 23]
          Length = 315

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 17/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +F++I+    +P         IG FDG+H GH  +++Q +  A        V++F+  
Sbjct: 1   MEIFYDIKDTMIVPE----CAATIGVFDGVHAGHRQVIKQMMDEAQQHGYKSMVITFDKL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         ++    + ++L ++G   L+   F ++ A  +A +F+ ++L E L V
Sbjct: 57  PQQLFVPGFQAQLITTLDEKIQLLGELGIDYLVVLPFDMQIAQLTAREFMAQILHERLNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTK- 176
           K +  G   +FG+ R    G   + G+    H     E+  +   + VSSS IR  +T+ 
Sbjct: 117 KALCIGYDNQFGRGRMETFGDYVEYGKALNIHVFKAMEVCPDGFDVPVSSSLIRHLITEE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRT 232
           G     + +L + + +   V+ GE IG  LG+PTAN  + PD    ++  +GVYA+    
Sbjct: 177 GKAFEVSQMLKHYYKLTGRVVAGEHIGTGLGYPTAN--VVPDNAEKLIPADGVYAVLASI 234

Query: 233 QDQTSYSGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                   + N G+ PT   NG    LE  I DF  ++YG++  +SF   +R E  F   
Sbjct: 235 DGSEPMQAMMNIGKRPTF--NGKQRTLEVNILDFKGDLYGKQVAISFVKLVRLEQHFSSA 292

Query: 292 EKLKIYMGEDEKKARKILE 310
           ++LK  + +DE   R I E
Sbjct: 293 DELKRQIEKDEVLIRDIFE 311


>gi|224993184|gb|ACN76279.1| RibC [Listeria innocua]
 gi|224993196|gb|ACN76285.1| RibC [Listeria innocua]
 gi|224993198|gb|ACN76286.1| RibC [Listeria innocua]
 gi|224993202|gb|ACN76288.1| RibC [Listeria innocua]
 gi|224993208|gb|ACN76291.1| RibC [Listeria innocua]
 gi|224993210|gb|ACN76292.1| RibC [Listeria innocua]
 gi|224993214|gb|ACN76294.1| RibC [Listeria innocua]
 gi|224993216|gb|ACN76295.1| RibC [Listeria innocua]
 gi|224993224|gb|ACN76299.1| RibC [Listeria innocua]
 gi|224993240|gb|ACN76307.1| RibC [Listeria innocua]
 gi|224993242|gb|ACN76308.1| RibC [Listeria innocua]
          Length = 211

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|224993294|gb|ACN76334.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L +  +  G   V 
Sbjct: 61  RFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYAD--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|224993232|gb|ACN76303.1| RibC [Listeria innocua]
          Length = 211

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANDR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|307708007|ref|ZP_07644479.1| riboflavin biosynthesis protein RibF [Streptococcus mitis NCTC
           12261]
 gi|307615944|gb|EFN95145.1| riboflavin biosynthesis protein RibF [Streptococcus mitis NCTC
           12261]
          Length = 275

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 128/257 (49%), Gaps = 13/257 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +AE+F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSKFASLTAEEFFA-TYIKAMNAKIIVAGFDYTFGSDKK-- 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
               +   + +    + +  + + K +I SS+ IR A+  G+V  A  LLG        V
Sbjct: 137 --TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKEAGELLGAPLPSRGMV 193

Query: 197 IHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GRT+G+PTAN+ L     +  +GVY +    Q Q  Y  +A+ G+N T      
Sbjct: 194 VHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEE 251

Query: 256 LLLESFIFDFSQEIYGQ 272
              E  IFDF+Q+IYG+
Sbjct: 252 ARFEVNIFDFNQDIYGE 268


>gi|296112569|ref|YP_003626507.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis RH4]
 gi|295920263|gb|ADG60614.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis RH4]
 gi|326560154|gb|EGE10543.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           103P14B1]
 gi|326564241|gb|EGE14475.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           46P47B1]
 gi|326567608|gb|EGE17721.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           12P80B1]
 gi|326569731|gb|EGE19781.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC8]
 gi|326570762|gb|EGE20787.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC1]
 gi|326571663|gb|EGE21678.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC7]
 gi|326573025|gb|EGE23001.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis CO72]
 gi|326573547|gb|EGE23510.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           101P30B1]
 gi|326577692|gb|EGE27568.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis O35E]
          Length = 323

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 135/302 (44%), Gaps = 29/302 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGN+DG+HLGH  +L      A    +   V+ F P PR      +P   L+  + +
Sbjct: 18  ALTIGNYDGVHLGHQALLSALADDAKAMGLLPAVMVFEPQPREYFSPDNPPARLTNLTEK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + ++G   LI   F     + SA  F+   L+  L V  ++ G  FRFG+DR GD+ 
Sbjct: 78  AEQITQLGVQYLIVASFDDAFRSLSAAAFVD--LLHSLNVSHLVLGDDFRFGQDRVGDKA 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ  G    F    +  +  N  +I SSS +R AL  G +  A  +LG  + I   V H
Sbjct: 136 FLQAAG----FSVDNLPSITQNGVRI-SSSLVRQALAVGDLNAAKSMLGRSYGITGVVEH 190

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYA---------IRFRTQD----------QTSYS 239
           G+KIGRTL FPTAN+ L        G++A         +R               Q S  
Sbjct: 191 GDKIGRTLDFPTANVSLGRLKPALHGIFAADVIAYQNGVRLDWASLGQGGVMGLKQGSLF 250

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G  + G  P+ V      LE  + DF+ E+YG    V F  +L  E  +  ++ LK  + 
Sbjct: 251 GAVSIGLRPS-VGGKQWRLEVHLPDFNGELYGVTLWVVFTHFLHGERHYDGVDALKAGIT 309

Query: 300 ED 301
            D
Sbjct: 310 ND 311


>gi|224993236|gb|ACN76305.1| RibC [Listeria innocua]
 gi|224993244|gb|ACN76309.1| RibC [Listeria innocua]
          Length = 211

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTVASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|145640632|ref|ZP_01796215.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R3021]
 gi|145274558|gb|EDK14421.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 22.4-21]
          Length = 163

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 3/151 (1%)

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
           +Q +SS+ IR AL    +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +  
Sbjct: 15  AQRISSTAIREALANDDLQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNP 74

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFD 280
            +GVYA++ R +    ++GVAN G+ PT+  NG + LLE  +FDFSQ IYGQ   V F  
Sbjct: 75  IKGVYAVKVRLKSGEIFNGVANMGKRPTI--NGLMQLLEVHLFDFSQNIYGQMVEVEFCH 132

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +R EIKF   + LK+ + +D + A+    S
Sbjct: 133 KIRNEIKFPSFDDLKVQIEKDVETAKAFFNS 163


>gi|251782478|ref|YP_002996780.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391107|dbj|BAH81566.1| riboflavin biosynthesis protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127366|gb|ADX24663.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis ATCC
           12394]
          Length = 310

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLS---PP 75
           V+ +G FDG+H GH  + ++A +IA   N  +  L+FN  PR      SP   L    P 
Sbjct: 19  VLVLGYFDGLHRGHKALFDKAQEIARAENLAVVTLTFNESPRLAFSRFSPDLLLHITYPE 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
              EK  E  G   L    FT   +  S++ FI    ++ L+ K ++ G  ++FG +R  
Sbjct: 79  KRHEKFAE-YGVDRLYLIDFTSAFSMLSSDDFIAH-YIKRLKAKHIVVGFDYKFGHNRT- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L +    +  +   I E+  ++ +I SS+ IR  + +G V  A  LLGY  +    
Sbjct: 136 DSDYLAR---NFDGNVYTIPEVTEDQEKI-SSTRIRKLILEGEVAKANQLLGYELSTRGM 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+GFPTAN+  +    L  +GVY        +   S + + G+N T     
Sbjct: 192 VVHGDARGRTIGFPTANLAPIDSTYLPADGVYVTDVLVNGKKHRS-MTSIGKNVTF-GGK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            L LE+ IF F  +IYG+   + + D +R   KF  I+ L
Sbjct: 250 ELRLEANIFGFEGDIYGESIEIIWLDKIRDMAKFDGIKDL 289


>gi|326561333|gb|EGE11691.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis 7169]
          Length = 323

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 135/302 (44%), Gaps = 29/302 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IGN+DG+HLGH  +L      A    +   V+ F P PR      +P   L+  + +
Sbjct: 18  ALTIGNYDGVHLGHQALLSALADDAKAMGLLPAVMVFEPQPREYFSPDNPPARLTNLTEK 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + ++G   LI   F     + SA  F+   L+  L V  ++ G  FRFG+DR GD+ 
Sbjct: 78  AEQITQLGVQYLIVASFDDAFRSLSAAAFVD--LLHSLNVSHLVLGDDFRFGQDRVGDKA 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ  G    F    +  +  N  +I SSS +R AL  G +  A  +LG  + I   V H
Sbjct: 136 FLQAAG----FSVDNLPSITQNGVRI-SSSLVRQALAVGDLNAAKSMLGRSYGITGVVEH 190

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYA---------IRFRTQD----------QTSYS 239
           G+KIGRTL FPTAN+ L        G++A         +R               Q S  
Sbjct: 191 GDKIGRTLDFPTANVSLGRLKPALHGIFAADVIAYQNGVRLDWTSLGQGGVMGLKQGSLF 250

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G  + G  P+ V      LE  + DF+ E+YG    V F  +L  E  +  ++ LK  + 
Sbjct: 251 GAVSIGLRPS-VGGKQWRLEVHLPDFNGELYGVTLWVVFTHFLHGERHYDGVDALKAGIT 309

Query: 300 ED 301
            D
Sbjct: 310 ND 311


>gi|224993234|gb|ACN76304.1| RibC [Listeria innocua]
          Length = 211

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + +  +G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMANLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L VK V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALNVKHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|224993186|gb|ACN76280.1| RibC [Listeria innocua]
 gi|224993190|gb|ACN76282.1| RibC [Listeria innocua]
 gi|224993192|gb|ACN76283.1| RibC [Listeria innocua]
 gi|224993194|gb|ACN76284.1| RibC [Listeria innocua]
 gi|224993200|gb|ACN76287.1| RibC [Listeria innocua]
 gi|224993204|gb|ACN76289.1| RibC [Listeria innocua]
 gi|224993212|gb|ACN76293.1| RibC [Listeria innocua]
 gi|224993218|gb|ACN76296.1| RibC [Listeria innocua]
 gi|224993220|gb|ACN76297.1| RibC [Listeria innocua]
 gi|224993222|gb|ACN76298.1| RibC [Listeria innocua]
 gi|224993228|gb|ACN76301.1| RibC [Listeria innocua]
 gi|224993230|gb|ACN76302.1| RibC [Listeria innocua]
 gi|224993238|gb|ACN76306.1| RibC [Listeria innocua]
 gi|224993246|gb|ACN76310.1| RibC [Listeria innocua]
          Length = 211

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + +  +G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMANLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S   F+   LV  L VK V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPRAFVDNYLV-ALNVKHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|196229766|ref|ZP_03128630.1| Riboflavin kinase [Chthoniobacter flavus Ellin428]
 gi|196226092|gb|EDY20598.1| Riboflavin kinase [Chthoniobacter flavus Ellin428]
          Length = 168

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 3/164 (1%)

Query: 147 YGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +GF  V +  ++    +IVSS+ IR A+  G +  AA LLG  FTI   V+ G+++GR L
Sbjct: 3   FGFSEVGVPAVKIG-DEIVSSTLIRAAVEDGDLARAAKLLGREFTILGTVVEGDRLGRKL 61

Query: 207 GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGPLLLESFIFDF 265
           GFPTAN+    +     GVYA++ R  D+    GVAN G  PT+    G  LLE  +FDF
Sbjct: 62  GFPTANLSAHNEQYPPNGVYAVQARRGDRM-LPGVANIGVRPTVKNAGGERLLEVHLFDF 120

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +EIYG+   ++F  +LRPE KF  ++ L+  + +D  +AR  L
Sbjct: 121 QEEIYGEDLEITFRKFLRPEQKFSGLDALREQIQKDAAQARLFL 164


>gi|194476617|ref|YP_002048796.1| putative riboflavin kinase/FAD synthase [Paulinella chromatophora]
 gi|171191624|gb|ACB42586.1| putative riboflavin kinase/FAD synthase [Paulinella chromatophora]
          Length = 321

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 141/306 (46%), Gaps = 17/306 (5%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI----TVLSFNPHPRTIIQSSSPIFTL 72
           +K   VA+G+FDG+H GH  ++     I+ NS      TV+SF PHPR ++    P   L
Sbjct: 12  VKPTAVAVGSFDGLHKGHRRVI---TNISENSTTIGVPTVVSFWPHPREVLYGD-PRLRL 67

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P+ +  +LE +G   L+   F+   A  + E F+++VL + L    V  G  FRFG +
Sbjct: 68  DMPAEKLTLLESLGIKQLVLVPFSERLAELTPEIFVRQVLKQQLGALKVAVGKNFRFGVN 127

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   L +  ++ G     +  L +   + VSSS IR AL +G +  A  LLG  +  
Sbjct: 128 RSGDTSALGRIAQEMGIKVEILPILWDGNER-VSSSRIRRALGEGKIQEATRLLGRPYRF 186

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYA--IRFRTQDQTSYSG-----VANF 244
              V++   + R  G PT  + +     L ++G+YA  +R    D    SG     + + 
Sbjct: 187 SGRVVNSSDVKRNHGLPTLKVIVDGRKFLPRQGIYAVWVRLDKGDVGLSSGGPIGAIMSL 246

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G    + P  P  +E +  D   +    R  +     LR + +F   E     +  D  +
Sbjct: 247 GPQSLVDPTIPSQVEVYFLDGRADFDEVRVYIEPVSLLRGQQEFWGTEGFYQQIHNDIMQ 306

Query: 305 ARKILE 310
           ARK LE
Sbjct: 307 ARKRLE 312


>gi|224993250|gb|ACN76312.1| RibC [Listeria monocytogenes]
 gi|224993252|gb|ACN76313.1| RibC [Listeria monocytogenes]
 gi|224993264|gb|ACN76319.1| RibC [Listeria monocytogenes]
 gi|224993268|gb|ACN76321.1| RibC [Listeria monocytogenes]
 gi|224993270|gb|ACN76322.1| RibC [Listeria monocytogenes]
 gi|224993272|gb|ACN76323.1| RibC [Listeria monocytogenes]
 gi|224993274|gb|ACN76324.1| RibC [Listeria monocytogenes]
 gi|224993276|gb|ACN76325.1| RibC [Listeria monocytogenes]
 gi|224993278|gb|ACN76326.1| RibC [Listeria monocytogenes]
 gi|224993280|gb|ACN76327.1| RibC [Listeria monocytogenes]
 gi|224993282|gb|ACN76328.1| RibC [Listeria monocytogenes]
 gi|224993286|gb|ACN76330.1| RibC [Listeria monocytogenes]
 gi|224993290|gb|ACN76332.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +  G   V 
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALHVQHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|224993254|gb|ACN76314.1| RibC [Listeria monocytogenes]
 gi|224993256|gb|ACN76315.1| RibC [Listeria monocytogenes]
 gi|224993258|gb|ACN76316.1| RibC [Listeria monocytogenes]
 gi|224993260|gb|ACN76317.1| RibC [Listeria monocytogenes]
 gi|224993262|gb|ACN76318.1| RibC [Listeria monocytogenes]
 gi|224993284|gb|ACN76329.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +  G   V 
Sbjct: 61  RFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYAD--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|269303196|gb|ACZ33296.1| riboflavin biosynthesis protein RibF [Chlamydophila pneumoniae
           LPCoLN]
          Length = 306

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 10/289 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ-S 65
           +EI  SL +      V +G FDG HLGH  +L  +I  + +    V++F+ HP+T++  +
Sbjct: 1   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLL--SILTSYSGSSGVITFDSHPQTVLSLN 58

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            + +       +Q  +L+      L    F L  AN SAE+F+  +L   L+ K +I G 
Sbjct: 59  HTKLINTKEERLQ--LLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGY 115

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               GK++  +   L   G+  G   + I   R + + +VSS  IR  L+ G++  A   
Sbjct: 116 DSCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMD-NIVVSSKAIRQFLSAGNLECAHRF 174

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   +  G  IG +LGF T N+    + L+  GVYA   R  D T+  GV N G
Sbjct: 175 LGHPYAISGKITEGSGIGSSLGFATINLP-REESLIPLGVYACEIR-YDSTTCQGVMNLG 232

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L
Sbjct: 233 TAPTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETL 280


>gi|258615960|ref|ZP_05713730.1| riboflavin biosynthesis protein RibF [Enterococcus faecium DO]
          Length = 235

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG-KDRA 134
           S +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G KD A
Sbjct: 2   SKKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDIA 60

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                 +    ++   TV  +E +  K   +SS+ IR  L  G V  AA LLG  + +E 
Sbjct: 61  DVAHFPEYAKGRFKIVTVSKEEEQGEK---ISSTRIRGLLDSGQVKEAAKLLGCTYEVEG 117

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T    
Sbjct: 118 VVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEG 176

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + EDE+
Sbjct: 177 RELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQ 226


>gi|16752718|ref|NP_444985.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae AR39]
 gi|8163432|gb|AAF73668.1| riboflavin kinase/FMN adenylyltransferase [Chlamydophila pneumoniae
           AR39]
          Length = 308

 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 141/289 (48%), Gaps = 10/289 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ-S 65
           +EI  SL +      V +G FDG HLGH  +L      + +S   V++F+ HP+T++  +
Sbjct: 3   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYSGSS--GVITFDSHPQTVLSLN 60

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            + +       +Q  +L+      L    F L  AN SAE+F+  +L   L+ K +I G 
Sbjct: 61  HTKLINTKEERLQ--LLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGY 117

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               GK++  +   L   G+  G   + I   R + + +VSS  IR  L+ G++  A   
Sbjct: 118 DSCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMD-NIVVSSKAIRQFLSAGNLECAHRF 176

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   +  G  IG +LGF T N+    + L+  GVYA   R  D T+  GV N G
Sbjct: 177 LGHPYAISGKITEGSGIGGSLGFATINLP-REESLIPLGVYACEIR-YDSTTCQGVMNLG 234

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L
Sbjct: 235 TAPTF-ERESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETL 282


>gi|15618240|ref|NP_224525.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae CWL029]
 gi|15835855|ref|NP_300379.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae J138]
 gi|4376597|gb|AAD18469.1| FAD Synthase [Chlamydophila pneumoniae CWL029]
 gi|6672048|dbj|BAA88661.1| FAD synthase [Chlamydophila pneumoniae]
 gi|8978694|dbj|BAA98530.1| FAD synthase [Chlamydophila pneumoniae J138]
          Length = 308

 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 141/289 (48%), Gaps = 10/289 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ-S 65
           +EI  SL +      V +G FDG HLGH  +L      + +S   V++F+ HP+T++  +
Sbjct: 3   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYSGSS--GVITFDSHPQTVLSLN 60

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            + +       +Q  +L+      L    F L  AN SAE+F+  +L   L+ K +I G 
Sbjct: 61  HTKLINTKEERLQ--LLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGY 117

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               GK++  +   L   G+  G   + I   R + + +VSS  IR  L+ G++  A   
Sbjct: 118 DSCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMD-NIVVSSKAIRQFLSAGNLECAHRF 176

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   +  G  IG +LGF T N+    + L+  GVYA   R  D T+  GV N G
Sbjct: 177 LGHPYAISGKITEGSGIGGSLGFATINLP-REESLIPLGVYACEIR-YDSTTCQGVMNLG 234

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L
Sbjct: 235 TAPTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETL 282


>gi|224993188|gb|ACN76281.1| RibC [Listeria innocua]
 gi|224993226|gb|ACN76300.1| RibC [Listeria innocua]
 gi|224993248|gb|ACN76311.1| RibC [Listeria innocua]
          Length = 211

 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K G T+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGITIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|33241665|ref|NP_876606.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae TW-183]
 gi|33236174|gb|AAP98263.1| riboflavin kinase [Chlamydophila pneumoniae TW-183]
          Length = 306

 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 10/289 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ-S 65
           +EI  SL +      V +G FDG HLGH  +L  +I  + +    V++F+ HP+T++  +
Sbjct: 1   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLL--SILTSYSGSSGVITFDSHPQTVLSLN 58

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            + +       +Q  +L+      L    F L  AN SAE+F+  +L   L+ K +I G 
Sbjct: 59  HTKLINTKEERLQ--LLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGY 115

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               GK++  +   L   G+  G   + I   R + + +VSS  IR  L+ G++  A   
Sbjct: 116 DSCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMD-NIVVSSKAIRQFLSAGNLECAHRF 174

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   +  G  IG +LGF T N+    + L+  GVYA   R  D T+  GV N G
Sbjct: 175 LGHPYAISGKITEGSGIGGSLGFATINLP-REESLIPLGVYACEIR-YDSTTCQGVMNLG 232

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L
Sbjct: 233 TAPTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETL 280


>gi|50914296|ref|YP_060268.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|50903370|gb|AAT87085.1| Riboflavin kinase [Streptococcus pyogenes MGAS10394]
          Length = 310

 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKKLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R  D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HNRT-DSDYLARNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|94990584|ref|YP_598684.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94544092|gb|ABF34140.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 310

 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R  D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HNRT-DSDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|224993206|gb|ACN76290.1| RibC [Listeria innocua]
          Length = 211

 Score =  112 bits (279), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPIT--VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTEVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+      G   V 
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYAN--GRFEVT 117

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           I + +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K G T+GFPTAN+
Sbjct: 118 IVDKQTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGITIGFPTANI 177

Query: 214 QLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L+ K GVYA++FR   +T + G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGET-HLGMASIGYN 211


>gi|50083318|ref|YP_044828.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ADP1]
 gi|49529294|emb|CAG67006.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter sp. ADP1]
          Length = 333

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 147/325 (45%), Gaps = 41/325 (12%)

Query: 7   IEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTII 63
           + +N   P+  L    V IGNFDG+HLGH  ++ Q   IA+ + +   V+ F P P    
Sbjct: 4   LRLNALSPDFELAATAVTIGNFDGVHLGHQAMISQLKNIADANSLKTLVMIFEPQPLEYF 63

Query: 64  QSSSPIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           +        +PP   S++EK+  L ++G   +   KF       SA++F   +L   L  
Sbjct: 64  KGYE-----APPRISSLREKVEYLTELGVDYIAIAKFDHYFRGLSAQEFAD-LLKFKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+   L+     YGF    +D +   K + VSS+ IR  L +G 
Sbjct: 118 KQLVLGDDFHFGKNRQGNSEFLRD----YGFKITNLDTI-EFKGERVSSTRIRQVLAEGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ----- 233
           +  AA LLG  +++   V +G++IGRTL FPT N++L        G+Y +    +     
Sbjct: 173 LALAAKLLGRPYSMIGRVQYGDQIGRTLNFPTINVRLGRHKPCLSGIYGVDVVCETTSLR 232

Query: 234 ----------------DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTV 276
                           D  S  G  + G  P +    P   LE    + S  +YG    V
Sbjct: 233 KKIMHDPNAPKGIAGYDPDSLYGAGHVGTRPAIKQAHPEWRLEVHFPEVSANLYGLLMRV 292

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGED 301
           +F  YL  E  +  ++ LK  + +D
Sbjct: 293 TFLHYLHGERNYPSLDALKAGIDQD 317


>gi|19746179|ref|NP_607315.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS8232]
 gi|19748359|gb|AAL97814.1| putative macrolide-efflux protein [Streptococcus pyogenes MGAS8232]
          Length = 310

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFLRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKKLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R  D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HNRT-DSDYLARNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|313115483|ref|ZP_07800948.1| riboflavin biosynthesis protein RibF [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622193|gb|EFQ05683.1| riboflavin biosynthesis protein RibF [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 305

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 139/305 (45%), Gaps = 34/305 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           KG  VA+G FDGIH+GH  ++E A++ A                   ++  +FT   P +
Sbjct: 17  KGTAVAMGFFDGIHIGHRAVIESAVQWAKEH---------------DAAPAVFTFKLPMV 61

Query: 78  QE----KILEKMGFSALI-----RYKFTL---ETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    ++L      ALI      Y  T    E    + EQF+  ++ +    + ++ G 
Sbjct: 62  NKMKGKRLLSTADKHALIASLGVEYYLTPDFEEIKGLTPEQFVLGIVRD-CNARALVCGE 120

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG   AG+  +L+      G   + +  +   + + VSS+ IRTAL  G +  A  +
Sbjct: 121 NFTFGAKAAGNPELLRTLCAPLGVEVIVV-PMAQFEEKPVSSTRIRTALEGGDIPAANAM 179

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVAN 243
           LG  + I  +V HG  +G TLG PT N QL P+   L + G+Y  R        Y     
Sbjct: 180 LGMPYAIRFEVQHGAGLGHTLGVPTIN-QLYPEGFQLPRSGIYITRTHI-GGVWYPSATG 237

Query: 244 FGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G  PT+  +   +  E+FI  FS ++YG    V F  YL P  KF  +++L+  +    
Sbjct: 238 LGSRPTVNDDATKVTCETFIPGFSGDLYGTDPVVEFHAYLSPSKKFDTLDELRACINNAA 297

Query: 303 KKARK 307
           K+A++
Sbjct: 298 KRAQE 302


>gi|15675210|ref|NP_269384.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes M1 GAS]
 gi|71910773|ref|YP_282323.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS5005]
 gi|94988694|ref|YP_596795.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94992517|ref|YP_600616.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|13622377|gb|AAK34105.1| putative macrolide-efflux protein [Streptococcus pyogenes M1 GAS]
 gi|71853555|gb|AAZ51578.1| riboflavin kinase/FMN adenylyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|94542202|gb|ABF32251.1| riboflavin kinase [Streptococcus pyogenes MGAS9429]
 gi|94546025|gb|ABF36072.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS2096]
          Length = 310

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R  D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HNRT-DSDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|94994507|ref|YP_602605.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|94548015|gb|ABF38061.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS10750]
          Length = 310

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R  D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HNRT-DSDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKVRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|225874890|ref|YP_002756349.1| riboflavin biosynthesis protein RibF [Acidobacterium capsulatum
           ATCC 51196]
 gi|225794117|gb|ACO34207.1| riboflavin biosynthesis protein RibF [Acidobacterium capsulatum
           ATCC 51196]
          Length = 322

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 20/329 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M VF +++    +P  L   V AIGNFDG+H GH  I+      A         ++F+PH
Sbjct: 1   MQVFRSLD---EIPAALGPTVAAIGNFDGVHRGHQAIIADVRARAAALQAASVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    ++P   +  +L   G  A +   FT E +   A  F ++VL   L  
Sbjct: 58  PVRLLRPEAAPRLITPLPERLDLLAATGLDATLVLPFTREFSQTPARDFAERVLARGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  FRFG+        L + G++ GF  V+   +   +   VSSS +R  +  G 
Sbjct: 118 VEVHEGDSFRFGRGAEAGTPELVEFGKEMGF-AVYGHRVLTVRGVPVSSSEVRRRIAAGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQ 235
           +  A  LLG  F++ S    G  IG  L  PT N+    +++   GVY  R R      +
Sbjct: 177 MGMARALLGRAFSVCSTQERGRGIGSRLLVPTINLAAYDELVPAHGVYVTRVRIGAGAAK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCT------VSFFDYLRPEIKFK 289
            S+  V N G  PT        +ES++  ++ E      T      V F   LR E  F 
Sbjct: 237 RSFRAVTNCGVRPTFGVER-FAIESYLLGWNPEADPVEITPETPVEVCFLQRLRDEQAFP 295

Query: 290 DIEKLKIYMGEDEKKARKILESSYPLSER 318
             E LK  +  D  KA    E  + L+ER
Sbjct: 296 SPEALKAQIMRDVAKA----EHYHRLAER 320


>gi|139473681|ref|YP_001128397.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes str. Manfredo]
 gi|134271928|emb|CAM30166.1| putative riboflavin biosynthesis protein [Streptococcus pyogenes
           str. Manfredo]
          Length = 310

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 13/290 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  +  ++ P 
Sbjct: 19  VLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLLHITYPK 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG +R  D
Sbjct: 79  KRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFGHNRT-D 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  +    V
Sbjct: 137 SDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYGLSTRGRV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T      
Sbjct: 193 VHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVTF-GGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 251 LRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|255018488|ref|ZP_05290614.1| hypothetical protein LmonF_13696 [Listeria monocytogenes FSL
           F2-515]
          Length = 135

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 2/134 (1%)

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L+ K GVYA++FR   +
Sbjct: 1   GELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGE 60

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T + G+A+ G N T   +  L +E +I DF +EIYG+   + ++ + RPE+KF  +E L 
Sbjct: 61  T-HLGMASIGYNITFKDDQALSIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLI 119

Query: 296 IYMGEDEKKARKIL 309
             + +DE+  R  L
Sbjct: 120 AQLEKDEQDTRAFL 133


>gi|269215366|ref|ZP_06159220.1| riboflavin biosynthesis protein RibF [Slackia exigua ATCC 700122]
 gi|269131222|gb|EEZ62296.1| riboflavin biosynthesis protein RibF [Slackia exigua ATCC 700122]
          Length = 319

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 10/282 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSP 74
           L G   A G FDG+HLGH  +++QAI+ A  S      L+F+  P  +  +   +  L  
Sbjct: 16  LSGASCAFGVFDGVHLGHRFLIDQAIETARKSGGAAVALTFDVDPDELFHADR-LKKLMG 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + + L + G   ++   FT + A  +  +F++      +     + G  FRFG   A
Sbjct: 75  NERRLRALAETGADYVVVLTFTEDFAAQAPAEFLEATFGGCVPYALHV-GADFRFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+      G   +   EL+    + + ++ IR  L +G   +AA LLG+ +  + 
Sbjct: 134 GTVADLEAWASAGGTR-ICAHELKGADGRPIRATRIRLLLAEGRCEDAAALLGHPYVFDG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           +V  G   G  +GF TAN++L P +L  L EGVYA  + T D   Y    + G  PT   
Sbjct: 193 EVRKGRGEGADMGFRTANLEL-PAMLQTLGEGVYAA-WATVDGARYRAAMSVGAAPTF-E 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 E  I DF  +IYG    V    +LRP I+F  +++L
Sbjct: 250 AATATCEVNILDFLGDIYGDSIEVEPVRFLRPMIRFSSVDEL 291


>gi|301300269|ref|ZP_07206478.1| riboflavin biosynthesis protein RibF [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852110|gb|EFK79785.1| riboflavin biosynthesis protein RibF [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 264

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 7/255 (2%)

Query: 53  LSFNPHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++F+ HP+ I Q+           + EK+   + +G       KF    A  S + FI K
Sbjct: 1   MTFDRHPKIIFQNIDGEKFKYLTMLDEKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDK 60

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            +V  L    V+ G  + +GK    +   +     K  F  + +D L+ N  Q +SS+ I
Sbjct: 61  YVV-GLHAICVVAGQDYTYGKHDIANMDTISDFA-KGRFEIITVDHLQRN-DQKISSTQI 117

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIR 229
           R  L  G+V  A  LLGY++     V HG K GR +GFPT N+ +   + +L EGVYA++
Sbjct: 118 RKDLDSGNVEAANLLLGYQYENHGTVEHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVK 177

Query: 230 FR-TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
            +  +D   Y G+A+ G N T   +    +E  +F+F + +YG++  V ++ +LR  +KF
Sbjct: 178 VKIDKDNLWYEGMASIGHNETFGDDLEKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKF 237

Query: 289 KDIEKLKIYMGEDEK 303
             +E+L   + +D++
Sbjct: 238 DSVEELIDQLNKDKR 252


>gi|210633989|ref|ZP_03297938.1| hypothetical protein COLSTE_01856 [Collinsella stercoris DSM 13279]
 gi|210158987|gb|EEA89958.1| hypothetical protein COLSTE_01856 [Collinsella stercoris DSM 13279]
          Length = 333

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 8/293 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIF 70
           +P       +AIG FDG+H GH  +L++A + A    + V++  F+P P  ++ S+ P  
Sbjct: 29  VPGAPAPCAIAIGAFDGVHRGHLDLLQRAKRDARERGLAVVAVTFDPDPDEVV-SAHPAP 87

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + + L   G    I   FT E A      F ++VL  +LEV+ V  G  FR G
Sbjct: 88  KLTSMADRVRALASAGAGVAI-VPFTRELAALDHIGFFERVLAPYLEVRVVHVGADFRLG 146

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              A    +++  G   G   V   EL ++    ++++ IR+ +  G V  A   LG R 
Sbjct: 147 AHGASTVDVMRAWGAARGMD-VMGHELLSDGDAPITATRIRSLIAAGDVCAARRELGRRP 205

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +   V  G   G  +GFPTAN+++   + +  +GVYA  F   D   +    N G  P 
Sbjct: 206 FVRGVVKRGRGQGTGMGFPTANIEVPGGMQMPADGVYA-GFALVDGAVWPAAINAGVPPM 264

Query: 250 MVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              +     LE+ +  +  ++YG+   ++F   +RP   F  +E+L   +  D
Sbjct: 265 FADSAASARLEANLIGYRGDLYGKTVAIAFDRLVRPSHSFDSVEELIAAVNRD 317


>gi|262370953|ref|ZP_06064276.1| riboflavin kinase [Acinetobacter johnsonii SH046]
 gi|262314029|gb|EEY95073.1| riboflavin kinase [Acinetobacter johnsonii SH046]
          Length = 333

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 151/321 (47%), Gaps = 42/321 (13%)

Query: 12  SLPNH--LKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSS 67
           +LP++  L+   V IGNFDG+HLGH  ++ Q  A+    N    V+ F P P    +   
Sbjct: 8   ALPSNTQLEKTAVTIGNFDGVHLGHQAMIHQLKAVSKQQNLKTVVMIFEPQPLEFFKGYD 67

Query: 68  PIFTLSPP---SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                +PP   S++EK+  L ++G   +   KF     + SAEQF   +L E L  ++++
Sbjct: 68  -----APPRISSLREKVEYLTELGVDYIAVAKFDNSFRSLSAEQFAD-ILKEKLNAQSLV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK+R G+   L    E YGF    ++ +   + + VSS+ IR  L  G +  A
Sbjct: 122 LGDDFHFGKNRQGNSEFL----ENYGFQIHNLETILA-EGERVSSTRIRQTLAAGDLALA 176

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ--------- 233
           A LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +    +         
Sbjct: 177 AQLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVDVMCETTSLRDKVK 236

Query: 234 ------------DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFD 280
                       D ++  G  + G  P +    P   LE    D S  +YG    V+F +
Sbjct: 237 ADHPNRLGVAGYDHSALFGAGHVGTRPAIQQAQPEWRLEVHFPDVSANLYGLLMRVTFLN 296

Query: 281 YLRPEIKFKDIEKLKIYMGED 301
           YL  E  +  +E LK  + +D
Sbjct: 297 YLHGEKNYPSLEALKAGIDDD 317


>gi|71903598|ref|YP_280401.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS6180]
 gi|71802693|gb|AAX72046.1| riboflavin kinase [Streptococcus pyogenes MGAS6180]
          Length = 310

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 147/290 (50%), Gaps = 13/290 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  + E+A ++AN     + V +F   P+      SP  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKALFEKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLLHITYPK 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG +   D
Sbjct: 79  KRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFGHN-CTD 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +  E        I E++ +  +I S++ IR  + +G+V+ A HLLGY  +    V
Sbjct: 137 SDYLTRNFEG---QVYTIKEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDLSTRGRV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T      
Sbjct: 193 VHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVTF-GGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 251 LRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|325295029|ref|YP_004281543.1| riboflavin biosynthesis protein RibF [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065477|gb|ADY73484.1| riboflavin biosynthesis protein RibF [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 276

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 19/289 (6%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +G F+  H GH  ++++A +  N   + ++S       I               +E + E
Sbjct: 6   VGKFESFHKGHQSLIKEAKEKCNE--VFIISIKKWKDGIFSDKE----------RELLAE 53

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           K     LI + F  E  + + E+F  K+  +    + +  G  ++FGK RAG+    Q+ 
Sbjct: 54  KFKVK-LITFNFE-EIKDLTPEEFFLKL--KEAGCQKLFAGEDWKFGKGRAGNIFTAQEL 109

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
           G+K       +   + N  +I  +S IR  L +G +  A  LLG+ +     V  G K+G
Sbjct: 110 GKKLEIEVKVLPIKKFNGKKI-GTSEIRKLLQEGKISEANKLLGFNYFCLGKVKEGNKLG 168

Query: 204 RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
           R +GFPT N++   ++L+  GVY +R    D   + G+AN G+ PT+   G  +LE  + 
Sbjct: 169 RKIGFPTLNIEPEKELLMPNGVYEVRV-IVDSKHFKGIANLGKRPTVSSAGKKVLEVHVP 227

Query: 264 D-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           D    E+YG+   + F  +LR E KF  IE+LK  +  D +  +++  S
Sbjct: 228 DILLPELYGKELKIEFLKFLRSEKKFSSIEELKTQIKLDVENLKRLWRS 276


>gi|160943257|ref|ZP_02090493.1| hypothetical protein FAEPRAM212_00743 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445496|gb|EDP22499.1| hypothetical protein FAEPRAM212_00743 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105175|emb|CBL02719.1| riboflavin kinase/FMN adenylyltransferase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 305

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 14/295 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG  VA+G FDGIH+GH  ++E A++ A  +++   V +F    R  +++      L   
Sbjct: 17  KGTAVAMGYFDGIHIGHRAVIEGAVQWAKTHDAAPAVFTF----RLPVENKMKGKRLLST 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  ++  +G    +   F    A  S E+F++ + VE    + +  G  F FG   AG
Sbjct: 73  EDKHALIHSLGVEYYLTPDFEAIKA-LSPEEFVRGI-VENCHARALFCGENFTFGAKAAG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L+      G   V +  +   + + VSS+ IRTAL  G +  A  +LG  + I   
Sbjct: 131 TPELLRTLCAPLGVEVVVV-PMAQFEEKPVSSTRIRTALEGGDIPAANAMLGMPYAIRFA 189

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V HG  +G TLG PT N QL P    + + G+Y  R    +   Y      G  PT+  +
Sbjct: 190 VQHGAGLGHTLGVPTIN-QLYPQGFQMPRSGIYITR-TCINGVWYPSATGLGSRPTVNDD 247

Query: 254 GP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +  E+FI  FS ++YG    V F  YL P  KF  +++L+  + +  ++A++
Sbjct: 248 ATKVTCETFIPGFSGDLYGTDPVVEFHAYLSPSKKFDTLDQLRDCINDAARRAQE 302


>gi|21910422|ref|NP_664690.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS315]
 gi|28895998|ref|NP_802348.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes SSI-1]
 gi|21904620|gb|AAM79493.1| putative macrolide-efflux protein [Streptococcus pyogenes MGAS315]
 gi|28811248|dbj|BAC64181.1| putative macrolide-efflux protein [Streptococcus pyogenes SSI-1]
          Length = 310

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 13/290 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLLHITYPK 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG +   D
Sbjct: 79  KRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFGHN-CTD 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  +    V
Sbjct: 137 SDYLARNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDLSTRGRV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T      
Sbjct: 193 VHGDARGRTIGFPTANLTPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVTF-GGKE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 251 LRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|209559515|ref|YP_002285987.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes NZ131]
 gi|209540716|gb|ACI61292.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           NZ131]
          Length = 310

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFSRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITHPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +   D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HN-CTDSDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLVPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|307592349|ref|YP_003899940.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
 gi|306985994|gb|ADN17874.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
          Length = 356

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 54/336 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--------------------NNSPI---TVLSFNP 57
            VAIGNFDGIH GH  +L+  +  A                    N + I   TV++FNP
Sbjct: 9   TVAIGNFDGIHCGHQQVLQPILNSAGHQIPKNGCQNQFFSFSTECNETQIYYPTVVTFNP 68

Query: 58  HPRTII-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           HP+    +   P+ T     +QEKI  L  +G   ++   F  E A  S +QF++K+LV+
Sbjct: 69  HPKQFFSRQHRPLLT----PLQEKIKQLLSLGIKQVVPLTFNEELATISPQQFVEKILVQ 124

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+ + +  G  FRFG  R G    LQ+    +G     +      K + +SSS IR +L
Sbjct: 125 QLKAQKISVGHDFRFGYQRKGTATDLQEIAGSFGIPVTIVPPY-TYKGERISSSLIRQSL 183

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQ 233
            +G++     LLG  +T++      +++G    F    ++L  + LL + G YA R   +
Sbjct: 184 EQGNLQYIKALLGRSYTLQGFTEKQQEMG---DFSRIKLKLPSEKLLPRPGSYAARVFIE 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLL-------------------LESFIFDFSQEIYGQRC 274
           D    +      +N +   + PLL                   +E ++ D+  ++ GQ  
Sbjct: 241 DANQTALETAILKNLSCQFSFPLLYQGIVNINNFFGINEEESYVEIYLLDWPGDLQGQTI 300

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           T+    +LRP+++F  +E LK  +  D   A+ +L+
Sbjct: 301 TIELEYFLRPQLEFTSLEALKKQIQIDLSLAKVMLD 336


>gi|227497563|ref|ZP_03927789.1| possible FAD synthetase [Actinomyces urogenitalis DSM 15434]
 gi|226832963|gb|EEH65346.1| possible FAD synthetase [Actinomyces urogenitalis DSM 15434]
          Length = 287

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 11/277 (3%)

Query: 53  LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           ++F+PHP  + +  + +  ++  + + ++L   G  A++   +TL+ A  S   F+++ L
Sbjct: 5   VTFDPHPILVHRPHTHLPMVTSLADRLELLATTGLDAVLVIHYTLDFAQQSPYGFVRRWL 64

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            E L  + V+ G   RFG+  +GD   L++ G   G     + ++     +  SS+ +R 
Sbjct: 65  EELLGARAVVVGDDVRFGRGNSGDAATLEQIGRADGLEVEIVHDVLAPSGRRWSSTWVRE 124

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYA---- 227
            +  G V  AA +LG    +   V+HG + GR LGFPTAN+Q +   ++  +GVYA    
Sbjct: 125 LIEAGDVAGAAQVLGRPHRLRGTVVHGLRRGRELGFPTANLQAATAGVVPPDGVYAGWLV 184

Query: 228 -----IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDY 281
                       Q       + G NPT        +E+ +   S   +YG+   +   ++
Sbjct: 185 RSPGAGDGSGGGQERLPAAISIGTNPTFDDVPERTVEAHVLGRSDLNLYGEVVAIELVEH 244

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           LRP + F  +E L   M  D     ++L    P   R
Sbjct: 245 LRPMLAFDGLEPLLAQMRADVVDTARVLGVPVPAPVR 281


>gi|189485242|ref|YP_001956183.1| riboflavin biosynthesis protein RibF [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287201|dbj|BAG13722.1| riboflavin biosynthesis protein RibF [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 305

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 20/289 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP--P 75
           K  VVAIG FDG+H GH L++++ +  A          N     II    P+  +     
Sbjct: 18  KKSVVAIGTFDGMHKGHRLLIDKILSSARK--------NNLRSVIIVLEKPVKKVRGLLT 69

Query: 76  SIQEKILEKMGFSA---LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           + +EKI EK+ FS    +       E  +   E+F  + L + L V  ++ G  F FGKD
Sbjct: 70  TYEEKI-EKIKFSGADEIFVIGVPSEILSCCPEEFFDEFLHKMLNVSEIMCGIDFAFGKD 128

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G+   L+K+ ++       +  L+N     +SSS IR  + K  V NAA LLG  ++ 
Sbjct: 129 GKGNIEWLKKKAKEKNIKINIVKPLKN-----ISSSYIRILIEKDDVKNAASLLGRNYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
                  +  G+ LGFPT N+ ++ D LL +GVY I   +Q +  Y  + N G   T   
Sbjct: 184 TGIPFKEKGEGKKLGFPTVNLHVNSDKLLPKGVY-ISLISQGERIYPSLTNIGIRSTFDR 242

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              ++ E++I DF  E    +  V F   +R E KF  ++ LKI + +D
Sbjct: 243 GNKIVPETYILDFKGEWKKLQTKVMFLKKIRNEKKFASVDALKIQISKD 291


>gi|306827274|ref|ZP_07460561.1| riboflavin biosynthesis protein RibF [Streptococcus pyogenes ATCC
           10782]
 gi|304430421|gb|EFM33443.1| riboflavin biosynthesis protein RibF [Streptococcus pyogenes ATCC
           10782]
          Length = 310

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 13/296 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IF 70
           N     V+ +G FDG+H GH  + ++A ++AN     + V +F   P+      SP  + 
Sbjct: 13  NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTESPKLAFLRFSPELLL 72

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++ P  + +     G + L    FT + +  S++ FI    ++ L+ K ++ G  ++FG
Sbjct: 73  HITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITH-YIKNLKAKHIVVGFDYKFG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +   D   L +  E        I+E++ +  +I S++ IR  + +G+V+ A HLLGY  
Sbjct: 132 HN-CTDSDYLTRNFEG---QVYTIEEIKEDHRKI-SATWIRKLIQEGNVVKANHLLGYDL 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +    V+HG+  GRT+GFPTAN+  +    L  +GVY       ++  Y  + + G+N T
Sbjct: 187 STRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVYVTNVIVANKI-YRSMTSLGKNVT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                 L LE  IFDF +EIYG+   + + D +R   KF+ IE L   +  D++ A
Sbjct: 246 F-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLTDRLEYDKRTA 300


>gi|227820992|ref|YP_002824962.1| riboflavin biosynthesis protein RibF [Sinorhizobium fredii NGR234]
 gi|227339991|gb|ACP24209.1| riboflavin biosynthesis protein RibF [Sinorhizobium fredii NGR234]
          Length = 356

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 2/109 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP  L GGV+AIGNFDG+H GH  +L +A+  A     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPERLHGGVIAIGNFDGVHRGHQSVLNRALDEAKGRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQF 107
           PRT+ +   P+F L+P  ++ +ILE MGF A+I Y F    +  SA +F
Sbjct: 61  PRTVFRPDQPVFRLTPAPLKARILEGMGFGAVIEYPFDRTFSELSASRF 109


>gi|24379574|ref|NP_721529.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mutans UA159]
 gi|24377520|gb|AAN58835.1|AE014951_6 putative macrolide-efflux protein [Streptococcus mutans UA159]
          Length = 306

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 13/290 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  +  QA +IA      I VL+F   P+       P  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKELFNQAREIAQKMQLKIVVLTFPESPQLAFTRFEPDLLNHINYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +     + G   L    FT   A  S++ FI K  ++ L+ K V+ G  ++F   +A  
Sbjct: 79  KRYCKFAEYGVDCLYLTDFTSSFAKISSDDFI-KNYIKALKAKAVVMGFDYKFSHSKANS 137

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +       +    + + E++    +I SS+ +R  + +G +     LLGY F+    V
Sbjct: 138 DYL----KHHFAGQVITVPEVQYEGKKI-SSTRVRQLIKQGDMTQVNRLLGYEFSTRGIV 192

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG+  GRT+GFPTAN+  L    L  +GVY        +  Y  + + G+N T      
Sbjct: 193 VHGDARGRTIGFPTANLAPLDRTYLPADGVYVADV-IVGRKRYRSMTSIGKNITF-GGTE 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           L LE+ IFDF  +IYG+   + + + +R  +KF  +  L   +  D++ A
Sbjct: 251 LRLEANIFDFDDDIYGETIEIFWLNKIREMVKFNSVNDLVEQLKSDKEIA 300


>gi|31544324|ref|NP_852902.1| multifunctional FAD synthetase/riboflavin kinase/tRNA-specific
           2-thiouridylase [Mycoplasma gallisepticum str. R(low)]
 gi|81572856|sp|Q7NBZ0|MNMA_MYCGA RecName: Full=Trifunctional protein ribF/mnmA; Includes: RecName:
           Full=FMN adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=tRNA-specific
           2-thiouridylase mnmA
 gi|31541168|gb|AAP56470.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(low)]
 gi|284930363|gb|ADC30302.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(high)]
          Length = 657

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 35/292 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP---RTIIQSSSPIFTLSP 74
           KG  + IG FDGIH GH  + +Q+          +L+F+  P   R +      I  LS 
Sbjct: 17  KGVDLVIGFFDGIHKGHAKLFKQS------DRFNLLTFDHIPKKQRLLYPKVDEIEQLSA 70

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S         G   L+ Y   L   N SA++FI    ++ ++ K +I G+ F+FG D+ 
Sbjct: 71  LS---------GLEQLLVY--DLLNNNLSAQEFIDN-YIKLIQPKRIIVGSDFKFGSDQV 118

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +  K G    +  V +      K    S+S I+  +    +  A  LL   F ++ 
Sbjct: 119 -DYSLFAKNG----YEVVVV------KKDHCSTSEIKKLIINCDLDQANKLLLTPFYLKG 167

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            VI   + GRT+GF TAN+ L   ++ L EG Y  +    D  +Y G+   G+ P     
Sbjct: 168 TVIKNAQRGRTIGFVTANIILDNQLIELTEGSYVCKVIV-DNKTYQGICFIGK-PKTFDE 225

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                E+ IFDF Q+IYG++  V  + ++RP +KF  I +LK  +  D+K A
Sbjct: 226 KQRQCEAHIFDFDQDIYGKKIKVELYQFIRPTVKFNSINELKEAIENDKKAA 277


>gi|229815174|ref|ZP_04445510.1| hypothetical protein COLINT_02219 [Collinsella intestinalis DSM
           13280]
 gi|229809184|gb|EEP44950.1| hypothetical protein COLINT_02219 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 8/303 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDG+H GH  +L  AI  A    +  ++  F+P P  ++ S+ P   L+    +
Sbjct: 53  VIAIGAFDGVHRGHADLLRHAIDDARERGVAAVAVTFDPDPDEVV-SAHPAPKLTSMDGR 111

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L  +G    +   FT + A      F + VL  +L+++ +  G+ FR G   A    
Sbjct: 112 LRALTSIGVRVAV-VPFTRQLAALDHVAFFEGVLAPYLDIRAIHVGSDFRLGARGASTVP 170

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           I+   G + G      D + +  + I +++ IR+ + +G V +A  LLG R  +   V  
Sbjct: 171 IIADWGTQKGIAVTGHDLILDGDAPI-TATRIRSLIARGDVDSARRLLGRRPMLRGQVGP 229

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-GPL 256
           G   G  +GFPTAN+++     +  +GVYA  F   D   +    N G  P    +    
Sbjct: 230 GRGQGTGMGFPTANVEVPGYAQMPADGVYA-GFAEVDGAVWPAAINAGVPPMFADSVKSA 288

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
            LE+ +  FS ++Y ++  ++F   LRP   F+ ++ L   +  D +  R+   +S    
Sbjct: 289 RLEANLIGFSGDLYDKKVAIAFDRLLRPSHSFESVDALIEAVNRDIETVREQFGASPVRI 348

Query: 317 ERD 319
            RD
Sbjct: 349 ARD 351


>gi|290580426|ref|YP_003484818.1| putative macrolide-efflux protein [Streptococcus mutans NN2025]
 gi|254997325|dbj|BAH87926.1| putative macrolide-efflux protein [Streptococcus mutans NN2025]
          Length = 306

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 17/292 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           V+ +G FDG+H GH  +  QA +IA      I VL+F   P+       P  +  ++ P 
Sbjct: 19  VLVLGYFDGLHRGHKELFNQAREIAQKMQLKIVVLTFPESPQLAFTRFEPDLLNHINYPE 78

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +     + G   L    FT   A  S++ FI K  ++ L+ K V+ G  ++F   +A  
Sbjct: 79  KRYCKFAEYGVDCLYLTDFTSSFAKISSDDFI-KNYIKALKAKAVVMGFDYKFSHSKANS 137

Query: 137 RGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
             +      K+ F    + + E++    +I SS+ +R  + +G +     LLGY F+   
Sbjct: 138 DYL------KHHFVGQVITVPEVQYEGKKI-SSTRVRQLIKQGDMTQVNRLLGYEFSTRG 190

Query: 195 DVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GRT+GFPTAN+  L    L  +GVY        +  Y  + + G+N T    
Sbjct: 191 IVVHGDARGRTIGFPTANLAPLDRTYLPADGVYVADV-IVGRKRYRSMTSIGKNITF-GG 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             L LE+ IFDF  +IYG+   + + + +R  +KF  +  L   +  D++ A
Sbjct: 249 TELRLEANIFDFDDDIYGETIEIFWLNKIREMVKFNSVNDLVEQLKSDKEIA 300


>gi|319790168|ref|YP_004151801.1| riboflavin biosynthesis protein RibF [Thermovibrio ammonificans
           HB-1]
 gi|317114670|gb|ADU97160.1| riboflavin biosynthesis protein RibF [Thermovibrio ammonificans
           HB-1]
          Length = 292

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +G F  +H GH  ++E+A K  ++  +  +       +  +    +  L   S++     
Sbjct: 16  VGKFSALHRGHRKLIEEAKKRCSDVKLVTVKRGEQLFSGEEREELLKELRVESVE----- 70

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
            + F  +            S E+F++  L++ +    ++ G ++RFGK R+G     +K 
Sbjct: 71  -LPFEHI---------KELSPEEFLK--LLKEMGCSVLVVGKEWRFGKGRSGTAETAKKL 118

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
           G K G   V ++ ++  +S+I S+S I   L +G +  A  LLG+ +     V  G+ +G
Sbjct: 119 GRKLGIEVVTVEPVKEGESKI-STSEIVKLLREGSIEEANRLLGFNYFTVGTVERGKGLG 177

Query: 204 RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
           R LGFPT N+++  ++ L  GVYA+    + +     VAN+G  PT+  +   +LE  + 
Sbjct: 178 RRLGFPTLNVKVK-ELPLPYGVYAVNLVIEGR-KLPAVANYGVRPTVERDSKPVLEVHVP 235

Query: 264 DFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                ++YG+R  V F  +LRPE +F  +E+LK  +  D KK + +LE
Sbjct: 236 KAHLPQLYGKRVRVEFLKFLRPEKRFSTVEELKNQIKLDLKKFQTVLE 283


>gi|295102737|emb|CBL00282.1| riboflavin kinase/FMN adenylyltransferase [Faecalibacterium
           prausnitzii L2-6]
          Length = 305

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 14/294 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G  VA+G FDGIH+GH  ++  A++ A  + +   V +F       ++    + T     
Sbjct: 17  GSAVAMGFFDGIHIGHRAVINGAVEWARAHGAAPAVFTFRLPTENKMKGKRLLSTED--- 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  ++  +G    +   F  E    + EQF+  ++ +    + +  G  F FG   AG 
Sbjct: 74  -KHALIASLGVEHYLCPDFE-EIKAMTPEQFVLGIIRD-CNARALFCGENFTFGARAAGT 130

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++     G   V +  +   + + VSS+ IRTAL  G +  A  +LG  + I   V
Sbjct: 131 PELLRQLCAPLGVEVVVL-PMAQFEEKPVSSTRIRTALEGGDIPAANAMLGMPYAIRFTV 189

Query: 197 IHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN- 253
            HG  +GRTLG PT N QL P    L + G+Y  R R  D+  Y      G  PT+  + 
Sbjct: 190 HHGAGLGRTLGVPTIN-QLYPQGFQLPRYGIYITRTRIGDRW-YPSATGLGTRPTVNSDE 247

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             +  E+FI  F+ ++YG    V F  YL P  KF  +++L+  +    ++A++
Sbjct: 248 SKVTCETFIPGFTGDLYGTDPVVEFHAYLSPSKKFDTLDELRECIDHAAQRAQE 301


>gi|42525592|ref|NP_970690.1| riboflavin biosynthesis protein RibF, putative [Treponema denticola
           ATCC 35405]
 gi|41815603|gb|AAS10571.1| riboflavin biosynthesis protein RibF, putative [Treponema denticola
           ATCC 35405]
          Length = 307

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 141/300 (47%), Gaps = 39/300 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP-IFTLSPPS--I 77
            VA+G FDG+H+GH  ++++  K  N  P+ +        ++  +SSP I+T    S  +
Sbjct: 16  CVAVGFFDGLHVGHRAVIDRLCKCKNLRPVLI--------SLSNNSSPVIYTEEEKSYLL 67

Query: 78  QEKILEKMGFSALIRYKFTLE---TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           Q   L+ M         F+L      N +AE F   VL + L  KT++ G    FG D+ 
Sbjct: 68  QNGKLDTM---------FSLSEDIIKNMTAESFAHDVLNKMLNTKTLVAGENALFGLDQV 118

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D    +  G+KYGF TV    +       VSS+ I+  +  G     + +LG  + I  
Sbjct: 119 -DVNHFRSIGKKYGF-TVETVPMECINGLEVSSNTIKQTIHDGDFSKVSSMLGSSYLISG 176

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  G   G PTAN+ ++ + L    GVY    R Q +  + G+ N G  P+    
Sbjct: 177 TVVHGKGAGHKFGMPTANISIAANKLFPPHGVYGSISRFQGENHF-GMTNIGLRPSDDDI 235

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF------------KDIEKLKIYMGED 301
               +E+F+ +F ++IYGQ+  +    Y+R   KF            KDI+++  Y+ E+
Sbjct: 236 PIPTIETFLLNFDRDIYGQKVFLELLVYIRGIRKFDGGLAEVRQQIDKDIKQIHSYIEEN 295


>gi|302380658|ref|ZP_07269123.1| riboflavin biosynthesis protein RibF [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311601|gb|EFK93617.1| riboflavin biosynthesis protein RibF [Finegoldia magna
           ACS-171-V-Col3]
          Length = 308

 Score =  105 bits (262), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 16/280 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS--PIFTLSPPSIQE 79
           + +GNFDG+HL H  ++ + + +  +    V+ F  H   +++ +    I T+       
Sbjct: 18  ITLGNFDGLHLAHQKLINKCVNLGRSG---VIIFKSHTSEVLEDNKFKNILTMDDKIY-- 72

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L++M     +   F  +  + + ++F+   L E    K ++ G  F+FG + +GD   
Sbjct: 73  -LLKRMNVDYCLIKSFDKDFLSLNPKEFLN-YLKEHTNFKNLVVGNDFKFGINASGDVST 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+   + + ++   ID+   N   I S++ IR  L  G V +A  +L   F+I+  V+ G
Sbjct: 131 LKNFQKVFNYNLYIIDDQFINGVPIRSTT-IRKFLMSGDVEDANSILYRPFSIKGVVVDG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +  GR LG+PTAN++    I+   GVY       D   Y G+ + G N T      + +E
Sbjct: 190 KHRGRNLGYPTANLECKQYIIPAAGVYYTNV-IYDNKLYKGITSVGENLTY-DEHDVKIE 247

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD----IEKLK 295
           + I DF  ++YG+  T+ F + +R  IKF      I KLK
Sbjct: 248 THILDFKGDLYGKNLTLVFINKIRSNIKFNSEIELINKLK 287


>gi|2765032|emb|CAA71028.1| hypothetical protein [Calothrix viguieri]
          Length = 220

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 13/191 (6%)

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           TV++F+PHP+    S  P   L+P + + K L  +G   L+   F  E    S  +F++K
Sbjct: 18  TVVTFDPHPQEFF-SGKPRTLLTPLNEKVKQLRLLGVEQLVLLPFDRELCELSPVEFVEK 76

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF----IDELRNNKSQ--- 163
           +LV+ L+   +  G  FRFG  R+G    LQ    +Y          ID   ++ +Q   
Sbjct: 77  ILVQQLQATQISVGQDFRFGSKRSGTAYDLQIIAARYNIPVTIVSLEIDTQHDSTAQNTC 136

Query: 164 ----IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI 219
                +S+S IR+ L +G+V  A  LLG  +++   V+ G+++GRT+GFPTAN++L  D 
Sbjct: 137 PEMTRISTSLIRSILEEGNVERAQQLLGRPYSLHGVVVKGQQLGRTIGFPTANLELPKDK 196

Query: 220 LL-KEGVYAIR 229
            L + GVYA+R
Sbjct: 197 FLPRNGVYAVR 207


>gi|225021175|ref|ZP_03710367.1| hypothetical protein CORMATOL_01187 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946082|gb|EEG27291.1| hypothetical protein CORMATOL_01187 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 256

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 14/238 (5%)

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   ++   F +  A  S E+F  +++ + L+ + V+ G+ F FGK  AG   +L++ G 
Sbjct: 19  GIDHILAMSFNVAVAQLSPEEFFLQIVRDTLKARAVVVGSNFTFGKKAAGTTEVLRELGH 78

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE-KIGR 204
           KYG     ID L  + + ++ S+ IR  L +G V  A   LG  F++  +V+ G  + GR
Sbjct: 79  KYGIEVHVIDLLVEDDA-VICSTLIRRLLGEGKVREANAALGREFSVAGEVVRGAGRGGR 137

Query: 205 TLGFPTANMQLSPDILL-KEGVYA----------IRFRTQDQTSYSGVANFGRNPTMVPN 253
            LGFPTAN+  S  + L ++ VYA          I    +    Y    + G NPT   +
Sbjct: 138 ELGFPTANLYFSDLVALPQDAVYAGWLMVISQAPIDGDMKQGVRYPAAISVGHNPTF-GD 196

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +ES++   + ++YG    V F D++R   KF  + +L   + +D     +ILE+
Sbjct: 197 KRRSVESYVIGKNADLYGHTVVVEFVDWVRSMEKFTGVPELLAAIHQDVADTLRILEA 254


>gi|313624667|gb|EFR94631.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           innocua FSL J1-023]
          Length = 245

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F+   L   L++  +I G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSDHLTN-LQLSHIIVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + YG     +  +  N+++I SS+NIR  + +GH L A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYGIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFLEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE +G
Sbjct: 192 MVENGEMVG 200


>gi|289449798|ref|YP_003474591.1| riboflavin biosynthesis protein RibF [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184345|gb|ADC90770.1| riboflavin biosynthesis protein RibF [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 787

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 16/302 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANN---SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           + +G FDG+H GH  +L   I        SP  V +F+  P+        I T    + +
Sbjct: 57  LCLGFFDGVHQGHRELLRTLIYECGKHGYSP-DVWTFDTLPKF---KRPGIVTGLLQTKE 112

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +++  L  +G +     KFT   A+ S E F+ KV++  L VK ++ G  FRFG + +  
Sbjct: 113 QRLHDLASIGVARTFIQKFTPALADLSGEDFLTKVVLPNLPVKLIVVGYDFRFGHNMSWG 172

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L     ++      +  +    ++ V S+ IRTA+  G +  AA L G  FT+   V
Sbjct: 173 VEELANFSREHNIELRVVPPVTIG-TETVHSAKIRTAIAAGDLSLAAKLSGRHFTLAGRV 231

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           I G  IGR LGF TAN+ +    +L   GVY    R   + +Y  ++  G  PT+     
Sbjct: 232 IKGNAIGRELGFATANILVDESRVLPPHGVYRSLTRVNGR-AYRSISFLGIRPTVNEKQK 290

Query: 256 -LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE---DEKKARKILES 311
            L LE+ IFD + ++YG    V  +++++PE  F D+  LK  + +      K  K++E 
Sbjct: 291 HLQLETHIFDAAIDLYGSEINVELWEFMQPEKSFADLASLKSAIKQYCATAIKPNKVMEE 350

Query: 312 SY 313
            Y
Sbjct: 351 MY 352


>gi|72161186|ref|YP_288843.1| riboflavin kinase / FMN adenylyltransferase [Thermobifida fusca YX]
 gi|71914918|gb|AAZ54820.1| riboflavin kinase / FMN adenylyltransferase [Thermobifida fusca YX]
          Length = 317

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 18/309 (5%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF 70
           +P   K   V +G FDG+H GH  +L QA + A+    P+  ++F+P    +  +  P  
Sbjct: 12  VPADCKRSAVIVGTFDGVHRGHQRLLHQAREHADRLGLPLVAVTFDPPLGLVAGTLDPPV 71

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    +  +L + G  A+   + T + A   +     ++LV+ +     +   +   G
Sbjct: 72  VLTGAEYRAGLLAQHGVDAVCVLEATPDLAALPSRDLAHRILVDGVPAAVALLAEEDDDG 131

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                D   +   G+++ F  V +     +  + V+++ +R+ +  G V  A   LG   
Sbjct: 132 V--VFDLAAVHALGKEHDFSVVGL--AAGSGPEAVTAAQVRSLVLAGDVAGAHTALGRPH 187

Query: 191 TIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKEGVYA---IRFRTQDQTS---YSGVA 242
            +E  V+HG   GR  LGFPTAN+   P   +  +GVYA   +R  T  + +   +    
Sbjct: 188 RVEGVVVHGAARGRELLGFPTANLDCPPRSAVPADGVYAGWLLRLDTPPEGTEARWPAAV 247

Query: 243 NFGRNPTMVPNGPL-LLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + G NPT   +G +  +E++  D    E+YG    V F  ++RP ++F  I++L   M  
Sbjct: 248 SVGTNPTF--DGQVRTVEAYALDRDDLELYGLPMAVEFTHHIRPMLRFDSIDELIEAMQR 305

Query: 301 DEKKARKIL 309
           D  + R++L
Sbjct: 306 DVDRCRELL 314


>gi|167772651|ref|ZP_02444704.1| hypothetical protein ANACOL_04032 [Anaerotruncus colihominis DSM
           17241]
 gi|167665129|gb|EDS09259.1| hypothetical protein ANACOL_04032 [Anaerotruncus colihominis DSM
           17241]
          Length = 313

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 21/313 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF----- 55
           M VFH I    +          A G FDG+H+GH  ++ +A++ A    +    F     
Sbjct: 1   MEVFHTIAQAAAGAPAAV----ACGYFDGLHIGHAAVVGRAVQRAKEEGLCAGVFTFTRA 56

Query: 56  --NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
             +P  +T    +  I T    + +  IL+  G   ++   F+ E  N   E+F  +VLV
Sbjct: 57  GGSPERKT---GAGEIVT---EADKYAILDAWGVQRVLAPDFS-EFHNLEPEEFFDEVLV 109

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             +  + V  G  FRFG+  AG   +L+K     G     + E+     + VSS+ IR  
Sbjct: 110 RRMGARVVCCGADFRFGRAAAGGAALLEKLCASRGVALEIVPEVLCGGVR-VSSTRIREL 168

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT 232
           L  G V  A  LLG  F     V+HG+++GRT+  PT N +     + L+ GVYA     
Sbjct: 169 LAAGDVKEAGRLLGRAFGYRLTVVHGKRLGRTIDSPTINQRFPKSFVRLRHGVYAA-AAV 227

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D      VAN G  PT+     +  E++I  FS ++YG++  V   ++LR E KF  ++
Sbjct: 228 VDGALLPAVANIGLRPTVEQTDAVNSETYIIGFSGDLYGRQIEVRLLEFLRDEQKFASVD 287

Query: 293 KLKIYMGEDEKKA 305
            L+  +  D + +
Sbjct: 288 ALRARIQADARAS 300


>gi|300933066|ref|ZP_07148322.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium resistens DSM 45100]
          Length = 339

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 141/336 (41%), Gaps = 44/336 (13%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            G  V IG FDG+H GH  ++E+ I  A     P  + +F+PHP  +         L   
Sbjct: 3   DGSAVTIGVFDGVHRGHQQLVERVIAKARELGVPSVMYTFDPHPTVVFSPERVPALLGTV 62

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++   MG   ++   FT E A++S  +++ + LV+ L  K V+ G  F FG   AG
Sbjct: 63  EQRAELAHSMGIDHVVVVGFTPEIASWSPAEYVDRALVDMLRAKAVVVGDNFTFGHKAAG 122

Query: 136 DRGILQKRGEKYGFHTVFIDELRNN-----------KSQIVSSSNIRTALTKGHVLNAAH 184
              +LQ+ G + G     I  L ++           +  +V S+ IR  L  G+V  AA 
Sbjct: 123 TAQMLQELGAERGIDVDVISLLADSDATLGTEAEHPRDWVVCSTYIREQLAAGNVAAAAR 182

Query: 185 LLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRT-QDQTSYSG- 240
            LG  F++  +V H   + GR LGFPTAN+       L  +GVYA       DQ      
Sbjct: 183 ALGRNFSVRGEVTHGAGRGGRALGFPTANLYFQDKYALPADGVYAGYVTVLPDQVDREAQ 242

Query: 241 VANFGRNPTMVPNG---------------------------PLLLESFIFDFSQEIYGQR 273
           V   G  P +V  G                           P  +ESFI D   ++YG  
Sbjct: 243 VQQPGEPPILVKAGQKVGTMPVGERLPAAISVGTNPTFGHEPRSVESFILDHEADLYGLD 302

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             V F   +R +  + D+++L   +  D    R  L
Sbjct: 303 VEVEFIARIRGQETYSDLDELIAAIQRDVDATRDAL 338


>gi|302526944|ref|ZP_07279286.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
 gi|302435839|gb|EFL07655.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
          Length = 299

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 13/183 (7%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII---Q 64
              +P+     VVA+G FDG+H GH  +L++A+++     +P+ + +F+PHP TI    +
Sbjct: 63  TAEVPDGWGPSVVALGVFDGLHRGHQRVLDRAVRLGRERGAPVVLTTFDPHPATIAGRPR 122

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            ++P+ T+     + ++  + G   ++   FT   A  SAE+F+  VLV  L+   V+TG
Sbjct: 123 DTTPVATVE---HRAELARRHGADQVLVLPFTECLARTSAEEFVADVLVRALDATAVVTG 179

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           + FRFG   AGD  +L+K G   GF    ++ L        SS+ +RT +T G ++ AA 
Sbjct: 180 SNFRFGHRGAGDPALLRKLGHVSGFTAHAVELLPG-----CSSTLVRTLVTAGDLVGAAA 234

Query: 185 LLG 187
           +LG
Sbjct: 235 ILG 237


>gi|313620016|gb|EFR91543.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           innocua FSL S4-378]
          Length = 245

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F+   L   L++  +I G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSDHLSN-LQLSHIIVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + YG     +  +  N+++I SS+NIR  + +GH L A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYGIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFLEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE +G
Sbjct: 192 MVENGEMVG 200


>gi|16799810|ref|NP_470078.1| hypothetical protein lin0735 [Listeria innocua Clip11262]
 gi|16413187|emb|CAC95967.1| lin0735 [Listeria innocua Clip11262]
          Length = 245

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F+   L   L++  +I G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVTDHLSN-LQLSHIIVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + YG     +  +  N+++I SS+NIR  + +GH L A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYGIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFLEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE +G
Sbjct: 192 MVENGEMVG 200


>gi|169824460|ref|YP_001692071.1| riboflavin biosynthesis protein [Finegoldia magna ATCC 29328]
 gi|167831265|dbj|BAG08181.1| riboflavin biosynthesis protein [Finegoldia magna ATCC 29328]
          Length = 308

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 16/280 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +GNFDG+HL H  ++ + + +  +    V+ F  H   +++       L+   +++KI
Sbjct: 18  ITLGNFDGLHLAHQKLINKCVSLGKSG---VIIFKSHTSEVLEDDKFKNILT---MEDKI 71

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             +++M     +   F  +  + + ++F+  V  E    K ++ G  F+FG + +GD   
Sbjct: 72  YLVKRMNVDYCLIKSFDRDFLSLNPKEFLNYV-KEHTNFKNLVVGNDFKFGINASGDVST 130

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+     + +    ID+   N   I S++ IR  L  G V +A  LL   F+I+  V+ G
Sbjct: 131 LKNFQAVFNYKLYIIDDQFINGVPIRSTT-IRKFLMSGDVEDANSLLYRPFSIKGVVVDG 189

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +  GR LG+PTAN++    I+   GVY       D   Y G+ + G N T      + +E
Sbjct: 190 KHRGRNLGYPTANLECKQYIIPAAGVYYTNV-IYDNKLYKGITSVGENLTY-DEHDVKIE 247

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD----IEKLK 295
           + I DF  ++YG+  T+ F + +R  IKF      I KLK
Sbjct: 248 THILDFKGDLYGKNLTLVFINKIRNNIKFNSEIELINKLK 287


>gi|330945203|gb|EGH46882.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 168

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 87/168 (51%), Gaps = 12/168 (7%)

Query: 144 GEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           G  YGF      TV ID +R      VSS+ +R AL       A  +LG  F I   V+H
Sbjct: 3   GTTYGFTVEAAQTVEIDGIR------VSSTKVRKALAASDFALAERMLGRPFQIAGRVLH 56

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K+ R LG PTAN+QL    +   GVY +     D  ++ GVAN G  PT+  +G   L
Sbjct: 57  GQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHL 115

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           E  + DF+ ++Y +R TV+F   LR E +F  +E LK  +  D   AR
Sbjct: 116 EVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAAR 163


>gi|327389332|gb|EGE87677.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA04375]
 gi|332202967|gb|EGJ17035.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA47901]
          Length = 252

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 11/257 (4%)

Query: 53  LSFNPHPRTIIQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++FN  P+  ++   P   L    P+ +E+ L++ G   L    F+ + A+ +A++F   
Sbjct: 1   MTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFF-A 59

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             ++ +  K ++ G  + FG D+       +   + +    + +  + + K +I SS+ I
Sbjct: 60  TYIKAMNAKIIVAGFDYTFGSDKK----TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRI 114

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+  G+V  A  LLG        V+HG   GRT+G+PTAN+ L     +  +GVY + 
Sbjct: 115 RQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVD 174

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              Q Q  Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF 
Sbjct: 175 VEIQRQ-KYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFD 232

Query: 290 DIEKLKIYMGEDEKKAR 306
            +++L   +  DE+  R
Sbjct: 233 SVDQLVDQLKADEEVTR 249


>gi|218506403|ref|ZP_03504281.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli Brasil 5]
          Length = 96

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/95 (48%), Positives = 64/95 (67%)

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           FR QD T +  VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF 
Sbjct: 1   FRRQDGTLHDAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYIRPELKFD 60

Query: 290 DIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
            ++ L   +  DE++AR +L    PLS  D  +CF
Sbjct: 61  GLDPLVAQIKRDEEEARALLAGVKPLSALDGKLCF 95


>gi|297588439|ref|ZP_06947082.1| possible FAD synthetase [Finegoldia magna ATCC 53516]
 gi|297573812|gb|EFH92533.1| possible FAD synthetase [Finegoldia magna ATCC 53516]
          Length = 308

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +GNFDG+HL H  ++ + + +  +    V+ F  H   I++       L     +  +
Sbjct: 18  ITLGNFDGLHLAHQKLINKCVSLGKSG---VIIFKSHTSEILEDDKFKNILITDD-KINL 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L++M     +   F     +   E+F+  V  E    K ++ G  F+FG + +G+   L+
Sbjct: 74  LKRMNVDYCLIKSFDKAFLSLKPEEFLDYV-KEHTNFKNLVVGKDFKFGINASGNVSTLE 132

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
              + + +    ID+   N   I S++ IR  L  G + NA  +L   F+I   VI G+ 
Sbjct: 133 NYQKVFNYKLYIIDDQFINGVPIRSTT-IRKFLINGEIENANSMLYRPFSINGVVIDGKH 191

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            GR LG+PTAN++    I+   GVY       D   Y G+ + G N T      + +E+ 
Sbjct: 192 RGRNLGYPTANLECKEYIIPAAGVYYTNV-IYDNKLYKGITSIGENLTY-DEHDVKIETH 249

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           I DF  ++YG+  T+ F   +R  +KF
Sbjct: 250 ILDFKGDLYGKELTLVFIKKIRDNVKF 276


>gi|332073472|gb|EGI83951.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA17570]
 gi|332201598|gb|EGJ15668.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA47368]
          Length = 252

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 11/257 (4%)

Query: 53  LSFNPHPRTIIQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++FN  P+  ++   P   L    P+ +E+ L++ G   L    F+ + A+ +A++F   
Sbjct: 1   MTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFF-A 59

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             ++ +  K ++ G  + FG D+       +   + +    + +  + + K +I SS+ I
Sbjct: 60  TYIKAMNAKIIVAGFDYTFGSDKK----TAEDLKDYFDGEVIIVPPVEDEKGKI-SSTRI 114

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIR 229
           R A+  G+V  A  LLG        V+HG   GRT+G+PTAN+ L     +  +GVY + 
Sbjct: 115 RQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVD 174

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              Q Q  Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF 
Sbjct: 175 VEIQRQ-KYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFD 232

Query: 290 DIEKLKIYMGEDEKKAR 306
            +++L   +  DE+  R
Sbjct: 233 SVDQLVEQLKADEEVTR 249


>gi|308126671|ref|ZP_07663852.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ4037]
 gi|308107969|gb|EFO45509.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ4037]
          Length = 174

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 139 ILQKRGEKYGFHTV-----FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +LQ+ GEKYGF  V      + +LR      VSS+ IR AL +  +  A  +LG  ++I 
Sbjct: 1   MLQEAGEKYGFEVVSTQSFCLQQLR------VSSTAIREALARDDLHAAQEMLGRDYSIS 54

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V HG K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+  N
Sbjct: 55  GRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPVGGVANIGQRPTV--N 112

Query: 254 G-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           G    LE  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR  L
Sbjct: 113 GVRQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAARVWL 169


>gi|325261644|ref|ZP_08128382.1| putative riboflavin biosynthesis protein RibF [Clostridium sp. D5]
 gi|324033098|gb|EGB94375.1| putative riboflavin biosynthesis protein RibF [Clostridium sp. D5]
          Length = 298

 Score =  102 bits (255), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 145/300 (48%), Gaps = 21/300 (7%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           +++   VA G+FDGIH GH  ++E+ +   I  N    VLS       +  +      L+
Sbjct: 9   NMESTCVAFGSFDGIHKGHLAVVEKLVAEGIRKNCKSVVLSCFSEEEAVKNN-----VLT 63

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +   LEK G    + Y           E+F++ +++  L  K ++ G + +     
Sbjct: 64  TEEEKAYFLEKAGVDTFVSYNI----EGTQTEEFLRTMIIGTLGAKVIVAGKENK----- 114

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             +  +L+    + G   + ++  R +   +++ S IR A       +   + G+ + + 
Sbjct: 115 --ELSMLEHICGQEGIELITVETARYH-GDVITGSLIRKAFLDCRFEDVMDMCGHPYVMI 171

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            +V HG+ +GRT+G PTAN+ ++   L+   GVYA     +++  Y G+ N G  P++  
Sbjct: 172 GEVQHGKALGRTVGMPTANLGVADRKLMPPSGVYATLTNIENEV-YKGLTNIGTRPSVDS 230

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              + +E+F+ DFS++IYG+   +    Y+R   KF  ++K++  + +D  + ++ L+S+
Sbjct: 231 MPYITIETFLLDFSRDIYGKTLVMEVHLYIRGVQKFDSLDKVQEQVQKDLNQVKEYLDST 290


>gi|167759464|ref|ZP_02431591.1| hypothetical protein CLOSCI_01811 [Clostridium scindens ATCC 35704]
 gi|167663021|gb|EDS07151.1| hypothetical protein CLOSCI_01811 [Clostridium scindens ATCC 35704]
          Length = 278

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 139/298 (46%), Gaps = 21/298 (7%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           +   ++   VA G FDG+H GH  + ++ ++ A    +T          ++        L
Sbjct: 1   MGKKMQDTCVAYGYFDGMHKGHINVAKKTVETAKEKGLT--------SVVVSCKKVGEVL 52

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S    +E + ++ G    +   +       + E FI+ VLVE    K ++ G       +
Sbjct: 53  STEEEKEYLFKETGVQEFVCRDYE----EMAEEDFIKNVLVEEYGAKVIVLG-------E 101

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              +   +++  +  G   V  +  +     ++++  +RTA           L G+ + +
Sbjct: 102 NHSNVAKVKEAAKVCGAEVVICEAAKAQDGTVITTEAVRTAFDASDFDKILELCGHPYIM 161

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
              V HG+ +GRT+G PTAN+ ++ D L    GVYA   +  D   +  + N G+ P++ 
Sbjct: 162 IGSVEHGKALGRTVGMPTANLGVADDKLKPPSGVYATSVKIDDGV-FKAMTNIGKRPSVD 220

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               + +E+FI DF+++IYG++  +    ++R   KF ++E+++  + +D +K R++L
Sbjct: 221 NYDYVTIEAFILDFARDIYGKKIILGVRQFVRGVQKFDNLEQVQKQVQKDIEKVREVL 278


>gi|257063658|ref|YP_003143330.1| riboflavin kinase/FMN adenylyltransferase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791311|gb|ACV21981.1| riboflavin kinase/FMN adenylyltransferase [Slackia
           heliotrinireducens DSM 20476]
          Length = 290

 Score =  102 bits (254), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 10/280 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G   A G FDG+H GH  +++ A ++A  N      L+F+  P  + +    +  L    
Sbjct: 2   GASCAFGVFDGVHKGHQFLIDSACEMARENGGASVALTFDIDPDEVFRPDK-LKKLMTNE 60

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L +     ++   FT E A+     F+     E + + ++  G  FRFG    G 
Sbjct: 61  ERIQALSRTCADYVVVLPFTREFASQLPMDFLATTFGEEI-IYSLHVGNDFRFGCKAQGT 119

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G+  G      D L++     ++++ IR  L+ G    A  LLG+ +T    V
Sbjct: 120 VADLKAWGDGLGVRICDHD-LKSKYGSPITATRIRGLLSCGDCEVATKLLGHPYTFTGKV 178

Query: 197 IHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           + G   G  +GF TAN++L P +  +L EGVYA  +   D   Y    + G  PT   + 
Sbjct: 179 LEGRHEGADMGFATANLEL-PAMRQVLGEGVYAA-YGYVDGRKYKVAMSVGVAPTF-EDA 235

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               E+ I DF  +IYG   T+    YLRP IKF+  ++L
Sbjct: 236 TATCEAHILDFEGDIYGDTITIEPVHYLRPMIKFESTDEL 275


>gi|118475078|ref|YP_892268.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118414304|gb|ABK82724.1| riboflavin biosynthesis protein RibF [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 293

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 42/309 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-----SFNPHPRTIIQSSSPIFTLSPP 75
            +AIG+FDGIH GH  +++   K+  N  + V+        P  R    S  P F     
Sbjct: 14  AIAIGHFDGIHKGHKELIK---KLGKNGALVVVESDKACITPGDRREEYSGVPCFYYHLK 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I E                         ++F++ +  E+  +K ++ G  F+FGKDRA 
Sbjct: 71  DIVE----------------------LRGDEFLKLLQNEFPNLKRIVVGYDFKFGKDRAW 108

Query: 136 DRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           D+  L+    GE    +    D L       V SS IR  L  G +  A  LLG  ++I+
Sbjct: 109 DKHDLKNLFHGEVLVVNEFSFDGLG------VHSSAIRRFLRDGDIYRANRLLGREYSIK 162

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             VI G+ +G+   +PT N+ + P I  K GVYA R +  D T YS +   G   T   +
Sbjct: 163 GRVISGQGLGKKSIYPTLNLVVEPYITPKNGVYATRTKIGDDT-YSSITFIGNRFT--TD 219

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           G   +ES +FD   +       V F + +R   KF  +++LK  + +D   AR + +   
Sbjct: 220 GAFSIESHLFDVDLKDNIDEVRVCFIERIRDNFKFNSLDELKTQISKDMLIARNVAKCC- 278

Query: 314 PLSERDRII 322
            LS +D  I
Sbjct: 279 DLSLQDDYI 287


>gi|110004499|emb|CAK98836.1| putative riboflavin kinase / fad synthetase protein [Spiroplasma
           citri]
          Length = 295

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 145/294 (49%), Gaps = 25/294 (8%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT-- 71
           P++ +  V  +G FDG H GH  ++ + ++I     +  L F     T+ QS S      
Sbjct: 9   PSYKEAKVACLGLFDGFHQGHLKLITRLMEIKKQHNLATLFF-----TMSQSVSDFLQQV 63

Query: 72  ---LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L     +++I+EK+GF   +    T    N S +QF+  +L +   V  ++ G+ FR
Sbjct: 64  NTKLVDNHSKQQIVEKLGFDYYLEVPITTAFINLSPKQFL-TILKKQFNVTKIVIGSDFR 122

Query: 129 FGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           FGK+R GD   I+   G++     V++   ++N   + SS+ IR  L +  + +A  LL 
Sbjct: 123 FGKNREGDFNDIIAFFGQE----NVYLITRQDN---LFSSTTIRNFLLQYDLSSANKLLY 175

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             + +  +V  G+++G T+ FPTAN+ L   ++L  GVY      Q +  Y  + ++   
Sbjct: 176 EDYNLRGEVKPGKQLGWTINFPTANIYLPQKVILPHGVYITETLAQGK-FYPSMTSY--- 231

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              +  G  ++E ++ + + ++YGQ   V F  YLR  IK  ++ +L   + +D
Sbjct: 232 --RLFEGKEVVEIYLLNVNLDLYGQEIIVYFKKYLRENIKINNLTELVTLLKQD 283


>gi|256827227|ref|YP_003151186.1| riboflavin kinase/FMN adenylyltransferase [Cryptobacterium curtum
           DSM 15641]
 gi|256583370|gb|ACU94504.1| riboflavin kinase/FMN adenylyltransferase [Cryptobacterium curtum
           DSM 15641]
          Length = 309

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 123/281 (43%), Gaps = 7/281 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
             G     G FDG+H GH  +++ A K A+   S   VL+F+  P  I         LS 
Sbjct: 16  FAGSSCCFGVFDGVHTGHRFLIDAAKKAAHEAGSRSIVLTFDRDPDEIFAPDKLKKLLSN 75

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L + G +A+    FT   A  S + F++K    +     +  G  F FG    
Sbjct: 76  ED-RLALLAQSGVNAVCVLPFTRTLAALSPQDFLEKTFGVY-SPAFLHVGCDFAFGARAQ 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    LQ    + G      D L++    I++++ IR  L  G V  A  L+G  + +  
Sbjct: 134 GTVDDLQTWAHQSGTSICAYD-LKSADGDIITATRIRGLLADGWVEEANRLIGRAYALHE 192

Query: 195 DVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V  G   GR  GF TAN+ + S   ++ EGVYA  +       Y+   + G  PT   +
Sbjct: 193 TVRPGRSDGRDFGFRTANLTVPSERFVVAEGVYA-GYAIVAGKRYAAAISNGVAPTFADS 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               +E  I DF QE+YG+   V F   LRP ++F   ++L
Sbjct: 252 TTANVEVHILDFDQEMYGETIWVEFHHRLRPMMRFSSTQEL 292


>gi|284931128|gb|ADC31066.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. F]
          Length = 657

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 35/292 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP---RTIIQSSSPIFTLSP 74
           KG  + IG FDGIH GH  + +Q+          +L+F+  P   R +      I  LS 
Sbjct: 17  KGVDLVIGFFDGIHKGHAKLFKQS------DRFNLLTFDHIPKKQRLLYPKVDEIEQLSA 70

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S         G   L+ Y   L   N SA++FI    ++ ++ K +I G+ F+FG D+ 
Sbjct: 71  LS---------GLEQLLVY--DLLNNNLSAQEFIDN-YIKLIQPKRIIVGSDFKFGSDQV 118

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +  K G    +  V +      K    S+S I+  +    +  A  LL   F ++ 
Sbjct: 119 -DYSLFTKNG----YEVVVV------KKDHCSTSEIKKLIINCDLDQANRLLVAPFYLKG 167

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            VI   + GRT+GF TAN+ L   ++ L EG Y  +    D  ++ G+   G+ P     
Sbjct: 168 TVIKNAQRGRTIGFATANIILDNQLIELTEGSYVCKIIV-DNKTHQGICFIGK-PKTFDE 225

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                E+ IFDF Q+IY ++  V    ++RP +KF  I +LK  +  D+K A
Sbjct: 226 KQRQCEAHIFDFDQDIYEKKIKVELHQFIRPTVKFNSINELKEAIENDKKTA 277


>gi|313610067|gb|EFR85407.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes FSL F2-208]
          Length = 245

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   E Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCEPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE IG
Sbjct: 192 TVENGEMIG 200


>gi|303233665|ref|ZP_07320319.1| riboflavin biosynthesis protein RibF [Finegoldia magna BVS033A4]
 gi|302495099|gb|EFL54851.1| riboflavin biosynthesis protein RibF [Finegoldia magna BVS033A4]
          Length = 308

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 18/281 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +GNFDG+HL H  ++ + + +  +    V+ F  H   +++       L+   +++KI
Sbjct: 18  ITLGNFDGLHLAHQKLINKCVSLGKSG---VIIFKSHTSEVLEDDKFKNILT---MEDKI 71

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             +++M     +   F  +  + + ++F+  V  E    K ++ G  F+FG + +GD   
Sbjct: 72  YLVKRMNVDYCLIKSFDKDFLSLNPKEFLNYV-KEHTNFKNLVVGNDFKFGINASGDVST 130

Query: 140 LQKRGEKYGFHTVFI-DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           L+     + +    I D+  N     + S+ IR  L  G V +A  LL   F+I+  V+ 
Sbjct: 131 LKNFQAVFNYKLYIIGDQFINGVP--IRSTTIRKFLMSGDVEDANSLLYRPFSIKGVVVD 188

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+  GR LG+PTAN++    I+   GVY       D   Y G+ + G N T      + +
Sbjct: 189 GKHRGRNLGYPTANLECKQYIIPAAGVYYTNV-IYDNKLYKGITSVGENLTY-DEHDVKI 246

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD----IEKLK 295
           E+ I DF  ++YG+  T+ F + +R  IKF      I KLK
Sbjct: 247 ETHILDFKGDLYGKNLTLVFINKIRNNIKFNSEIELINKLK 287


>gi|315281397|ref|ZP_07870030.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           marthii FSL S4-120]
 gi|313614958|gb|EFR88469.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           marthii FSL S4-120]
          Length = 245

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 6/188 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+HLGH  IL  A+ I     I T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHLGHQTILNTALSIKKEHEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F+   L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVTDHLTN-LHLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + YG     +  +  N+++I SS+NIR  + +GH + A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYGIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFIEAEQLLGHPWYITG 191

Query: 195 DVIHGEKI 202
            V +GE I
Sbjct: 192 KVENGEMI 199


>gi|217965172|ref|YP_002350850.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           HCC23]
 gi|217334442|gb|ACK40236.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes HCC23]
 gi|307570267|emb|CAR83446.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes L99]
          Length = 245

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
           +V +GE IG
Sbjct: 192 NVENGEMIG 200


>gi|206896362|ref|YP_002247270.1| riboflavin biosynthesis protein RibF, putative [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738979|gb|ACI18057.1| riboflavin biosynthesis protein RibF, putative [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 337

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 20/291 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ-SSSPIFTLSPPSIQEK 80
           +  G F+ IHLGH  +L     + +     VL+F P P+  +  S S + T       E+
Sbjct: 37  IVFGGFESIHLGHRRLLSHVSGVNDGG---VLTFEPLPKEALGYSESRVLT-----DDER 88

Query: 81  I--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +   E MG + +I+  F  +  +   E F+ + L +   V+T++ G  FRFG++  GD  
Sbjct: 89  LCAFESMGINQIIKLPFE-KIKDLEPETFLSRYLED---VQTIVVGENFRFGRNAVGDIS 144

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L K+  +     + ++ L +   +IVS+  I+  +  G++  A  LLGY + I    +H
Sbjct: 145 LL-KQWCQLNRKNLIVEPLVSVDGEIVSTKAIKNYIHHGNMERAMKLLGYPYFIRGPRVH 203

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G +IG  +G PT N+  S        GVY   F   +Q S   +A+FG+ PT      +L
Sbjct: 204 GNRIGSKIGVPTVNLHWSKQKTRPPYGVYD-GFLLSNQWSGPALASFGKAPTF-DRKDVL 261

Query: 258 LESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           LE ++      I  G+     F  ++R E KF D   L   + EDE    K
Sbjct: 262 LEIYVPGIDLNIGAGEIVLYGFHRFVREEKKFPDATSLVQQIREDENDLAK 312


>gi|222823681|ref|YP_002575255.1| riboflavin kinase/FAD synthase [Campylobacter lari RM2100]
 gi|222538903|gb|ACM64004.1| riboflavin kinase/FAD synthase [Campylobacter lari RM2100]
          Length = 280

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 30/290 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   LE    +  N  + +++                 L+P   +  +
Sbjct: 16  LAIGCFDGMHLGH---LELFKHLDKNGALFIIAKEEKE-----------ALTPKDFRINL 61

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           ++      LI   F  +  NY  E F++ +  E+ +++ +I G  F+FGK++      +Q
Sbjct: 62  VD----FPLIFCDFD-KVKNYKGEDFLKLLKQEFPKLERIIVGYDFKFGKEKKCSAKDIQ 116

Query: 142 KRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
                 G +T+ +DE +  NKS  V +S I+T L +  V  A + LG  +TI++++I G+
Sbjct: 117 NLC---GINTIIVDEFKIQNKS--VHTSMIKTLLKEAKVKEAKNFLGRFYTIQANIIKGQ 171

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            IG    F T N+      L K+GVYA   + +++ SY  V+  G   T   +    LE+
Sbjct: 172 GIGAKELFATLNLYAKDFFLPKDGVYATLVKIENK-SYHSVSFIGIRST---DENFALET 227

Query: 261 FIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            I D +      +   +SF DY+R   KF DI  LK  + +D  KA++IL
Sbjct: 228 HILDENFTNTNAKSVELSFIDYIRANKKFNDIALLKAQISKDINKAKQIL 277


>gi|116872116|ref|YP_848897.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|116740994|emb|CAK20114.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 246

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+HLGH  IL+ A+ I     I T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHLGHQTILKTALSIKKEHEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F+   L   L +  +I G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSNHLTN-LNLSHIIVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + YG     +  +  N+++I SS+NIR+ + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRNLCKPYGISVTSVPVIETNQTKI-SSTNIRSYIRRGHFQEAEQLLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +G  IG
Sbjct: 192 LVENGVMIG 200


>gi|294790495|ref|ZP_06755653.1| riboflavin biosynthesis protein RibF [Scardovia inopinata F0304]
 gi|294458392|gb|EFG26745.1| riboflavin biosynthesis protein RibF [Scardovia inopinata F0304]
          Length = 393

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 157/371 (42%), Gaps = 69/371 (18%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI---- 62
           +   L +  K  VV IG+FDG+H GH  I+ +   +A    S   ++ F+P P  +    
Sbjct: 17  VEWPLLDKEKRSVVTIGSFDGVHKGHQAIISRVADLARQQGSFSVIIMFDPRPSYVHARE 76

Query: 63  ----------IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
                       +S     LS  S + + +E MG   LI   +TL  AN +   F+ + L
Sbjct: 77  KARIAGQGQDSTASRDDQALSSVSQRCEWIEGMGVDYLIIVTYTLPFANQTYVNFLGQ-L 135

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRN------------ 159
           V  L ++T++ G   R G+  AGD   ++      G F    +D+               
Sbjct: 136 VGKLGMRTLVLGHDARLGRGLAGDMKAMKNLASATGVFEVESVDDQGQEDVWIPQKIVYE 195

Query: 160 -----------------------------NKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                                         +++  SSS +R AL+ G + +AA +L    
Sbjct: 196 VPQGHGEPADPLEGMTKSERRAWTKKHGMKRARRWSSSFVRYALSTGRMGDAASVLSRFP 255

Query: 191 TIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTS---YSGVANFGR 246
            I   V+HGE+ GRTLG+PTAN+  L    +  +GVYA     QD ++        + G 
Sbjct: 256 QIRGLVVHGEQRGRTLGYPTANLGGLIEGFIPVDGVYAGFVTDQDDSNPHRIPAAISIGT 315

Query: 247 NPTMVP-----NGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             T V      +   ++ES++ D    +IY     V F  Y+RP+++FKD + L   +  
Sbjct: 316 KETFVDEIGQEHLKRVVESYLVDQDGIDIYNHHIKVEFGLYMRPQVRFKDAQALVDQLKN 375

Query: 301 DEKKARKILES 311
           DEK+ R   ES
Sbjct: 376 DEKETRTWAES 386


>gi|167972640|ref|ZP_02554917.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|167974634|ref|ZP_02556911.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|167976208|ref|ZP_02558485.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|167988706|ref|ZP_02570377.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|168363106|ref|ZP_02696280.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|198273693|ref|ZP_03206228.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209554240|ref|YP_002284755.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225550901|ref|ZP_03771850.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
 gi|225551305|ref|ZP_03772251.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|171903138|gb|EDT49427.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|184209202|gb|EDU06245.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|188018785|gb|EDU56825.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|188997869|gb|EDU66966.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|195659653|gb|EDX53033.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|198249721|gb|EDY74502.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209541741|gb|ACI59970.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225379120|gb|EEH01485.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|225380055|gb|EEH02417.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
          Length = 283

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 29/274 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L       NN   T+L+F   PR I      ++  +   IQ+  
Sbjct: 22  LVIGFFDGIHLGHMNLLSDP----NNQ--TILTFKNIPRKI----KKLYDFNE-RIQQ-- 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +GF  +  Y   ++  N S E+FI ++L + L  K +I G  F +G +      + Q
Sbjct: 69  LEDLGFKRIFIYD--IDQNNLSGEEFIDQIL-KPLTPKKIIVGANFTYGNNFCNASSLKQ 125

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                  +  V I  + N+    VS++ I+  +    V  A  LL   +    +V+ G++
Sbjct: 126 -------YFNVEIKIITND----VSTTKIKELIINKQVEIANKLLIKPYYRVGNVVRGDQ 174

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           I R +GF TAN+    +++ + EGVY  +    ++  Y  V   G   T+      ++E+
Sbjct: 175 IARNIGFNTANILCDNNLIDIAEGVYKAQVIFNNK-KYDSVVYLGIPKTINTRSFSMIEA 233

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            I DF+Q IY +R  + F  YL P +KF +I++L
Sbjct: 234 HILDFNQNIYDERIKIVFLKYLAPNLKFNNIDEL 267


>gi|13357915|ref|NP_078189.1| riboflavin kinase/FAD synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|167971788|ref|ZP_02554065.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 6 str. ATCC 27818]
 gi|168282590|ref|ZP_02690257.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 14 str. ATCC 33697]
 gi|168308745|ref|ZP_02691420.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
 gi|170762213|ref|YP_001752438.1| riboflavin biosynthesis protein RibF-like protein [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|11357020|pir||C82902 riboflavin kinase/FAD synthetase UU355 [imported] - Ureaplasma
           urealyticum
 gi|6899335|gb|AAF30764.1|AE002132_8 riboflavin kinase/FAD synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827790|gb|ACA33052.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 3 str. ATCC 27815]
 gi|171902599|gb|EDT48888.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
 gi|182675630|gb|EDT87535.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 14 str. ATCC 33697]
 gi|186700796|gb|EDU19078.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 6 str. ATCC 27818]
          Length = 283

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 29/274 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L       NN   T+L+F   PR I      ++  +   IQ+  
Sbjct: 22  LIIGFFDGIHLGHMNLLSDP----NNQ--TILTFKNIPRKI----KKLYDFNE-RIQQ-- 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +GF  +  Y   ++  N S E+FI ++L + L  K +I G  F +G +      + Q
Sbjct: 69  LEDLGFKRIFIYD--IDQNNLSGEEFIDQIL-KPLTPKKIIVGANFTYGNNFCNASSLKQ 125

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                  +  V I  + N+    VS++ I+  +    V  A  LL   +    +V+ G++
Sbjct: 126 -------YFNVEIKIITND----VSTTKIKELIINKQVEIANKLLIKPYYRVGNVVRGDQ 174

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           I R +GF TAN+    +++ + EGVY  +    ++  Y  V   G   T+      ++E+
Sbjct: 175 IARNIGFNTANILCDNNLIDIAEGVYKAQVIFNNK-KYDSVVYLGIPKTINTRSFSMIEA 233

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            I DF+Q IY +R  + F  YL P +KF +I++L
Sbjct: 234 HILDFNQNIYDERIKIVFLKYLAPNLKFNNIDEL 267


>gi|315301998|ref|ZP_07872985.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           ivanovii FSL F6-596]
 gi|313629631|gb|EFR97777.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           ivanovii FSL F6-596]
          Length = 245

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL +A+ I     I T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPSVLTIGKFDGVHIGHQTILNKALSIKREQEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G + LI   FT + A  + EQF++  L + L +  +I G++F FGK R 
Sbjct: 74  RMEKERWLAHFGVNHLIETAFTPKYAETTPEQFVESHLSQ-LNLSHIIVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+          + +  ++ N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVELLRDLCVPRNIGVISVPVIQTNQTKI-SSTNIRAFIRRGHFQEAEELLGHLWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE IG
Sbjct: 192 TVENGEMIG 200


>gi|13507897|ref|NP_109846.1| riboflavin kinase (flavokinase)/FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase); bifunctional
           [Mycoplasma pneumoniae M129]
 gi|2500206|sp|P75587|RIBF_MYCPN RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1674379|gb|AAB96321.1| riboflavin kinase/FMN adenylyltransferase [Mycoplasma pneumoniae
           M129]
 gi|301633510|gb|ADK87064.1| riboflavin biosynthesis protein RibF [Mycoplasma pneumoniae FH]
          Length = 269

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 30/290 (10%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           IG FDG+H GH L+ +     A + P+  L     P   +QS      L  P  Q ++  
Sbjct: 7   IGAFDGLHKGHQLLAQ-----AASGPVVALLIANIPS--LQSD----WLYEPK-QRQVQL 54

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +  F +++ + + +   N SA+ F  +++   L  + ++ G  F FGKD      +    
Sbjct: 55  QQHFQSVV-HSYDVIEHNISAQAFFDQIISP-LRCQQLVVGADFCFGKDNQNADFL---- 108

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
             +   +T  I +     SQ +SSS IR  L +G +  A  +L   +  E  VI G +  
Sbjct: 109 -RRLFPNTTIIPK----DSQTLSSSTIRQWLKQGQIEQANAVLLEPYFREGVVIRGNQQA 163

Query: 204 RTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
           R LG+PTAN+ L P ++ L+ G Y I   T  QT+Y GV           N  L+ E+ +
Sbjct: 164 RFLGWPTANITLKPYMVPLRCGSYVITV-TYHQTNYPGVGFISYK-----NDQLVCETHL 217

Query: 263 FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             FS ++YG++   +F  ++RP+ KF  ++ L+  +  D K+A+K    S
Sbjct: 218 IGFSGDLYGKQLRFTFNQFIRPQQKFSGVQALQKAISGDLKQAQKWFAQS 267


>gi|224499598|ref|ZP_03667947.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes Finland 1988]
          Length = 246

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|3248948|gb|AAD09933.1| riboflavin kinase [Coxiella burnetii]
          Length = 153

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 85/154 (55%), Gaps = 3/154 (1%)

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           ++ L  K V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R 
Sbjct: 1   MDRLGAKAVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQ 59

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL  G +     LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R   
Sbjct: 60  ALQAGDMAVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVR-AF 118

Query: 233 QDQTSYSGVANFGRNPTMVP-NGPLLLESFIFDF 265
            ++ SY GVA+ G  PT    N  LLLE ++F F
Sbjct: 119 LNKKSYRGVASLGVRPTFKDENARLLLEVYLFGF 152


>gi|16802770|ref|NP_464255.1| hypothetical protein lmo0728 [Listeria monocytogenes EGD-e]
 gi|47095293|ref|ZP_00232904.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224501967|ref|ZP_03670274.1| hypothetical protein LmonFR_05542 [Listeria monocytogenes FSL
           R2-561]
 gi|254830282|ref|ZP_05234937.1| hypothetical protein Lmon1_02937 [Listeria monocytogenes 10403S]
 gi|254900036|ref|ZP_05259960.1| hypothetical protein LmonJ_09485 [Listeria monocytogenes J0161]
 gi|254911411|ref|ZP_05261423.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935738|ref|ZP_05267435.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801058|ref|YP_003412923.1| hypothetical protein LM5578_0807 [Listeria monocytogenes 08-5578]
 gi|284994200|ref|YP_003415968.1| hypothetical protein LM5923_0762 [Listeria monocytogenes 08-5923]
 gi|16410117|emb|CAC98806.1| lmo0728 [Listeria monocytogenes EGD-e]
 gi|47016364|gb|EAL07286.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258608321|gb|EEW20929.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284056620|gb|ADB67561.1| hypothetical protein LM5578_0807 [Listeria monocytogenes 08-5578]
 gi|284059667|gb|ADB70606.1| hypothetical protein LM5923_0762 [Listeria monocytogenes 08-5923]
 gi|293589351|gb|EFF97685.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 246

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G + LI  +FT   A  + E+F+   L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|254828812|ref|ZP_05233499.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258601224|gb|EEW14549.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 246

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G + LI  +FT   A  + E+F+   L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNLSHIVVGSEFNFGKGRN 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|325067091|ref|ZP_08125764.1| riboflavin biosynthesis protein RibF [Actinomyces oris K20]
          Length = 213

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 103/193 (53%), Gaps = 7/193 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN------SPITV-LSFNPHPRTIIQSSSPIFT 71
           G VV +G FDG+H GH  +L + +++++        P+ V ++F+PHPR++ Q  + +  
Sbjct: 21  GAVVTMGIFDGVHRGHQAVLGRVVELSHELACDGERPLAVAVTFDPHPRSVHQPEADLPL 80

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++  + +   L  +G  A++   +TL+ A  S + F++  L E L  + V+ G   RFG+
Sbjct: 81  IASLTDRLVSLGDLGLDAVLVITYTLDFAAQSPQDFVRTWLEELLGARAVVVGDDVRFGR 140

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             +GD   L++ G + GF    +  + +++ +  SS+ IR  L  G++   + +LG    
Sbjct: 141 HNSGDSATLEQIGREDGFEVEIVSTICSDEGRRWSSTWIRQCLKDGNMRQVSRVLGRPHR 200

Query: 192 IESDVIHGEKIGR 204
           +   V+ G + GR
Sbjct: 201 LRGVVVRGLRRGR 213


>gi|46906978|ref|YP_013367.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091690|ref|ZP_00229486.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|226223358|ref|YP_002757465.1| riboflavin kinase / FAD synthase [Listeria monocytogenes Clip81459]
 gi|255521404|ref|ZP_05388641.1| riboflavin kinase / FAD synthase [Listeria monocytogenes FSL
           J1-175]
 gi|46880244|gb|AAT03544.1| putative riboflavin kinase/FMN adenylyltransferase [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47020009|gb|EAL10746.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|225875820|emb|CAS04523.1| Putative riboflavin kinase / FAD synthase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|328467292|gb|EGF38372.1| riboflavin kinase / FAD synthase [Listeria monocytogenes 1816]
          Length = 246

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|254823992|ref|ZP_05228993.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300765046|ref|ZP_07075033.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           FSL N1-017]
 gi|293593220|gb|EFG00981.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514171|gb|EFK41231.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           FSL N1-017]
          Length = 246

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|254933605|ref|ZP_05266964.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293585168|gb|EFF97200.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|328475601|gb|EGF46354.1| riboflavin kinase / FAD synthase [Listeria monocytogenes 220]
 gi|332311151|gb|EGJ24246.1| Riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           str. Scott A]
          Length = 246

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITG 191

Query: 195 DVIHGEKIG 203
            V +GE  G
Sbjct: 192 IVENGEMTG 200


>gi|212696542|ref|ZP_03304670.1| hypothetical protein ANHYDRO_01080 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676478|gb|EEB36085.1| hypothetical protein ANHYDRO_01080 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 157

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 163 QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILL 221
           +I++S++IR  +  G +  A   LG+ F ++  VI G + GR L FPTAN++ S      
Sbjct: 5   KIINSTDIRQMVRDGEIEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFKYTTA 64

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
           K GVY  +    D+  Y  + + G NPT   N  + +E++I DFS+ IYG+  ++ F +Y
Sbjct: 65  KSGVYFTKVNI-DRDFYYALTDIGTNPTF-ENKEVKIETYIMDFSKNIYGKNISIEFLEY 122

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           LRP+ KF   ++L   M +D++  RK++E
Sbjct: 123 LRPDYKFNSADELIEQMEKDKETGRKLME 151


>gi|296454831|ref|YP_003661975.1| riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184263|gb|ADH01145.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 374

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHGAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAVATGVFELDVVDDRGPGEVRIPRDFKPEAPSGWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358


>gi|26554380|ref|NP_758314.1| riboflavin kinase-FAD synthetase [Mycoplasma penetrans HF-2]
 gi|26454390|dbj|BAC44718.1| riboflavin kinase-FAD synthetase [Mycoplasma penetrans HF-2]
          Length = 289

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 29/304 (9%)

Query: 7   IEINQSLPNHLKGGV-VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           I+IN    N ++    + +G+F+ IH GHH + ++         +   SF      +I  
Sbjct: 4   IKINLPFNNQIENTENLVLGHFNLIHYGHHELFKE---------LKNFSF------LIFE 48

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           ++P     P S+ E+I     F+    + + +   N  A+ FI++VL++ ++ K ++ G+
Sbjct: 49  NNPSKFKRPYSLDERIENLSKFNPEYIFVYDILKNNIDADVFIKEVLLK-IKPKNIVVGS 107

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FGK++ G+  +L+     +    ++       K++  SS NI   +  G +  A  +
Sbjct: 108 DFCFGKNKKGNVELLKSF---FNLKEIY-------KNEFYSSRNIIELIESGFLEKANEM 157

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           + + F   + VI G+ +   L  PTAN++ + DI +  G Y+      D   Y  ++  G
Sbjct: 158 MMFNFYYSNVVIKGKGLASELDVPTANIEDNKDIKIPSGSYS-SITLIDDKLYKSISFIG 216

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             P    N    +E+ IFDF+Q+IY ++  +    ++RP  KF DI+ L  ++  D   A
Sbjct: 217 I-PKSFENTKPTVETHIFDFNQDIYNKKIKIYPIKFIRPNQKFDDIKTLIKFIKNDCDIA 275

Query: 306 RKIL 309
           +K L
Sbjct: 276 KKFL 279


>gi|317482179|ref|ZP_07941202.1| riboflavin kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916413|gb|EFV37812.1| riboflavin kinase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358


>gi|23336293|ref|ZP_00121516.1| COG0196: FAD synthase [Bifidobacterium longum DJO10A]
 gi|189440608|ref|YP_001955689.1| FAD synthase [Bifidobacterium longum DJO10A]
 gi|189429043|gb|ACD99191.1| FAD synthase [Bifidobacterium longum DJO10A]
          Length = 374

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITDEWIDLYGHKVRVEFVGFLRPQVKFDGPDQL 358


>gi|213693048|ref|YP_002323634.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524509|gb|ACJ53256.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459225|dbj|BAJ69846.1| riboflavin kinase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 374

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHGAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  AQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKRIANLAVATGVFELDVVDDRGPGEVRIPRDFKPEAPSGWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358


>gi|213612702|ref|ZP_03370528.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 155

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           +SS+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +G
Sbjct: 6   ISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKG 65

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
           VYA+           GVAN G  PT V      LE  + D   ++YG+   V     +R 
Sbjct: 66  VYAVEVTGLGDKPLPGVANIGTRPT-VAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRN 124

Query: 285 EIKFKDIEKLKIYMGEDEKKARK 307
           E +F  +++LK  +  DE  ARK
Sbjct: 125 EQRFASLDELKAQIARDELTARK 147


>gi|317490687|ref|ZP_07949153.1| riboflavin biosynthesis protein RibF [Eggerthella sp. 1_3_56FAA]
 gi|316910218|gb|EFV31861.1| riboflavin biosynthesis protein RibF [Eggerthella sp. 1_3_56FAA]
          Length = 307

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 123/282 (43%), Gaps = 9/282 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
            KG   A G FDG+H GH  +L+ A   A         L+F+  P  +   +  +  L  
Sbjct: 16  FKGTSCAFGVFDGVHRGHRYLLDCARSTAAETGGASVALTFDIDPDEVFHPTR-LKKLMT 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + ++L   G   +    FT + A  S E+F+ +   +      +  G  F+FG   A
Sbjct: 75  NEERVRMLADSGIDVVAVLPFTRDFAASSPEEFLVQTF-DGTVPSFLHVGYDFKFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L       G  +V   +L+++    ++++ IR  L  G V  A  LLG  + +  
Sbjct: 134 GTVRDLDSWA-AVGGTSVQAHDLKSDDGAPITATRIRLLLAGGDVEEANRLLGRPYFMTG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V  G   G  +GF TAN+ + PD +  L +GVYA  +   D   Y    N G   T   
Sbjct: 193 VVEPGRGEGADMGFRTANL-VVPDQMRPLGDGVYAA-YAHVDGVRYKAAVNVGVAATFAD 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 E  + DFS ++YG+   V F  +LRP  KF D+++L
Sbjct: 251 RATATCEVHLLDFSGDLYGKPVKVEFLHWLRPMRKFDDLDEL 292


>gi|261338242|ref|ZP_05966126.1| protein RibF [Bifidobacterium gallicum DSM 20093]
 gi|270276895|gb|EFA22749.1| protein RibF [Bifidobacterium gallicum DSM 20093]
          Length = 404

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 158/376 (42%), Gaps = 86/376 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHP------------RTIIQSS 66
           VV +G FDG+H GH  ++E+ ++IA+   +   V+ F+P P              +  + 
Sbjct: 26  VVTVGVFDGLHRGHQAVVERVVQIAHKLDLFSVVIMFDPRPGFVHAYAKQHDGADVPDTL 85

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                L+    + ++L+++G    I   +T+  +  S   F+   LV  L ++T++ G  
Sbjct: 86  RDANLLTDVDRRLQLLQQLGVDVAIVVHYTMAFSRVSYLTFLGN-LVGKLGMRTLVLGED 144

Query: 127 FRFGKDRAG---------------------DRG----------------ILQKRGEKYGF 149
              G +R G                     DRG                +L+ +      
Sbjct: 145 AALGAERKGTVERIRTIADGTGMFELDVVDDRGPGKTRVPPKLTGLEAQVLEGQQPSDPR 204

Query: 150 HTVFIDELRNNKSQI-------VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
            T+   ++R    ++       +SS+NIR  L  G + +A  LLG    +E  V+HGE+ 
Sbjct: 205 KTMTKAQMRAWSKKLQAKLVRELSSTNIRYLLNLGVIEDANALLGRAHAVEGVVVHGEER 264

Query: 203 GRTLGFPTANMQLSPD-ILLKEGVYAIRF-------------RTQDQTSYSGVANFGRNP 248
           GRTLGFPTAN+    D  L  +GVYA                + Q+Q +  G    GR  
Sbjct: 265 GRTLGFPTANVGAPVDGYLPADGVYAGWLVDLGPADQSAATDQMQEQETMEGEQEHGRWA 324

Query: 249 TMVPNGP-------------LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  G              +L  + I D   ++YG R  V F  +LRP+IKF+  + LK
Sbjct: 325 ADISIGTKPTYSELTGLHERVLEANAITDDWLDLYGHRVRVEFVQFLRPQIKFESSDALK 384

Query: 296 IYMGEDEKKARKILES 311
             +  + ++A +I ++
Sbjct: 385 AELERNAEQAWEICQA 400


>gi|254994019|ref|ZP_05276209.1| riboflavin kinase / FAD synthase [Listeria monocytogenes FSL
           J2-064]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 4/188 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++       +  P 
Sbjct: 15  RPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIEIYREMLTPR 74

Query: 77  IQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           +++K  L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK R  
Sbjct: 75  MEKKRWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNLSHIVVGSEFNFGKGRDS 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I   
Sbjct: 134 DVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYITGI 192

Query: 196 VIHGEKIG 203
           V +GE  G
Sbjct: 193 VENGEMTG 200


>gi|8574528|gb|AAF77614.1|AF151719_1 RibC-like protein [Streptococcus thermophilus]
          Length = 187

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 8/188 (4%)

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  ++FG  R  D   L +        TV + E + +  + +SS+ +R  + +G+
Sbjct: 1   QEIVVGFDYKFGHHRT-DTDYLDRNFSG----TVHVIEEQQSGGEKISSTRVRQLIREGN 55

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS 237
           V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +   IL  +GVY       D   
Sbjct: 56  VKEANNLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTILPADGVYVADV-VIDGKR 114

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   
Sbjct: 115 YRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCDQ 173

Query: 298 MGEDEKKA 305
           +  D+K A
Sbjct: 174 LKADKKIA 181


>gi|289434009|ref|YP_003463881.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170253|emb|CBH26793.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 245

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 6/188 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ +  +  I T +SF+PHP   ++    I+   L+P
Sbjct: 15  RPAVLTIGKFDGVHIGHQKILNTALSLKKSDEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G   LI   FT   A  + EQF+   L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAHFGVDYLIETAFTPRYAETTPEQFVTNHLSN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D  +L+     Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + I  
Sbjct: 133 SDVELLRDLCAPYNIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWYISG 191

Query: 195 DVIHGEKI 202
            V +GE I
Sbjct: 192 MVENGEMI 199


>gi|257791554|ref|YP_003182160.1| riboflavin biosynthesis protein RibF [Eggerthella lenta DSM 2243]
 gi|325833205|ref|ZP_08165711.1| riboflavin biosynthesis protein RibF [Eggerthella sp. HGA1]
 gi|257475451|gb|ACV55771.1| riboflavin biosynthesis protein RibF [Eggerthella lenta DSM 2243]
 gi|325485587|gb|EGC88055.1| riboflavin biosynthesis protein RibF [Eggerthella sp. HGA1]
          Length = 307

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 123/282 (43%), Gaps = 9/282 (3%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
            KG   A G FDG+H GH  +L+ A   A         L+F+  P  +   +  +  L  
Sbjct: 16  FKGTSCAFGVFDGVHRGHRYLLDCARSTAAETGGASVALTFDIDPDEVFHPTR-LKKLMT 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + ++L   G   +    FT + A  S E+F+ +   +      +  G  F+FG   A
Sbjct: 75  NEERVRMLADSGVDVVAVLPFTRDFAASSPEEFLVQTF-DGTVPSFLHVGYDFKFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L       G  +V   +L+++    ++++ IR  L  G V  A  LLG  + +  
Sbjct: 134 GTVRDLDSWA-AVGGTSVQAHDLKSDDGAPITATRIRLLLAGGDVEEANRLLGRPYFMTG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V  G   G  +GF TAN+ + PD +  L +GVYA  +   D   Y    N G   T   
Sbjct: 193 VVEPGRGEGADMGFRTANL-VVPDQMRPLGDGVYAA-YAHVDGVRYKAAVNVGVAATFAD 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 E  + DFS ++YG+   V F  +LRP  KF D+++L
Sbjct: 251 RATATCEVHLLDFSGDLYGKPVKVEFLYWLRPMRKFDDLDEL 292


>gi|291457241|ref|ZP_06596631.1| protein RibF [Bifidobacterium breve DSM 20213]
 gi|291381076|gb|EFE88594.1| protein RibF [Bifidobacterium breve DSM 20213]
          Length = 374

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 63/338 (18%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI------------I 63
           K  VV +G FDG+HLGH  ++ + +++A+  ++   V+ F+P P  +             
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVINRVVELAHRHDAFSIVILFDPRPAFVHGWAGAHNGEEPT 82

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           QS+     L+    + + LE+ G   ++   +TL  A+ S   F+ ++  + L ++T++ 
Sbjct: 83  QSNVDADALTGIDERLRRLEEFGVDHVLVVHYTLAFADKSYIFFLGQLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL------------------------- 157
           G     GK RAGD   +       G F    +D+                          
Sbjct: 142 GQDAAMGKGRAGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFRPEAPTEWGEPADP 201

Query: 158 -------------RNNKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                        + N+++ +   SS+N+R  L  G + +A  +LG    IE  V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGVPHAIEGKVVHGEE 261

Query: 202 IGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL---L 257
            GRT+GFPTAN+   +   +  +GVYA      D   +    + G  PT      L   +
Sbjct: 262 RGRTIGFPTANLGSETQGYIPVDGVYAGWLVDGDN-RWPAAISIGTKPTFSEKTGLHERV 320

Query: 258 LESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +E++ I D   ++YG    V F  +LRP++KF   ++L
Sbjct: 321 VEAYAITDDWLDLYGHNVRVEFVGFLRPQVKFDGPDQL 358


>gi|255321408|ref|ZP_05362568.1| riboflavin biosynthesis protein RibF [Campylobacter showae RM3277]
 gi|255301561|gb|EET80818.1| riboflavin biosynthesis protein RibF [Campylobacter showae RM3277]
          Length = 293

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 40/291 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPP 75
            VAIG+FDG+H GH  +L+Q   +     + V+  N     P  +    SS P F     
Sbjct: 15  AVAIGHFDGVHRGHKQLLKQ---LGEYGGLVVIDKNKANITPKLKRAEYSSYPCFLYDFE 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           SI+                          ++FI  +  ++  ++ ++ G  FRFG++RA 
Sbjct: 72  SIK----------------------GLGGDEFIALLKRDFKNLQKIVVGFDFRFGRNRAW 109

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D+  L++    +    + +DE+  +    V SS IR  + +G +  A  LLG  ++IE  
Sbjct: 110 DKHDLRR---IFDGEVIVVDEVCFD-GMGVHSSAIREYIKQGEIYKANRLLGREYSIEGR 165

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+ IG     PT N+ +   +L +EGVYA R R  D  +Y  V   G   +   +G 
Sbjct: 166 VIKGQGIGSRELVPTLNLDIKSYLLPREGVYATRTRI-DYKTYGSVTFIGNRVS--TDGN 222

Query: 256 LLLESFIFDFSQEIYG-QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             +E+ + +  + I G     V F   LR   KF+ + +LK  +G D K+A
Sbjct: 223 FSVETHVLN--ENIEGASDVAVCFIKRLRDNRKFESLGELKEQIGTDIKQA 271


>gi|294786526|ref|ZP_06751780.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens
           F0305]
 gi|294485359|gb|EFG32993.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens
           F0305]
          Length = 409

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 158/394 (40%), Gaps = 93/394 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP------ 59
           +++  L +  +  VV IG FDG+H GH  +L   +++A  ++S   V+ F P P      
Sbjct: 13  KVDWPLLDAQRRSVVTIGTFDGVHKGHQAVLSTTVELARKHDSFSLVIIFTPRPSFAHLA 72

Query: 60  ----RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
               RT  +    +  L+    +E+++ + G  AL   ++T E A  +   F+ + LV  
Sbjct: 73  WKEGRTASEEEDRL-ALTSLRQREELIARQGVDALFEMEYTPEFAQTTYTAFLGQ-LVGK 130

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKSQIV--------- 165
           + ++T++ G   R GKDR+GD   ++   +  G F    +D+        V         
Sbjct: 131 VGMRTLVLGEDARLGKDRSGDIKAIRNVAQAVGVFELEVVDDQGETAGTWVPGTVTYQAP 190

Query: 166 ---------------------------------SSSNIRTALTKGHVLNAAHLLGYRFTI 192
                                            SSS++R  L  G +  A  +LG    +
Sbjct: 191 QRKGEPANPLAGMSKAQKRAYTKKHHMRPVRDWSSSHVRDCLATGRIAEARSVLGRDPQV 250

Query: 193 ESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYA---IRFRTQDQTSYSGVAN----- 243
              V+HG+  GR LGFPTAN+       +  +GVYA   + +   D +   G A+     
Sbjct: 251 AGVVVHGDARGRDLGFPTANVGGYREGFIPVDGVYAGYLLDYGFGDGSVSEGAASRQEDL 310

Query: 244 ----------FGRNPTMVPNG----------------PLLLESFIF-DFSQEIYGQRCTV 276
                       R P  +P                     +E+++      ++YG R  V
Sbjct: 311 SGHPYREFDGRDREPARLPAAISVGLNDTFHEAGEDVSRTIEAYVLGSHDLDLYGHRVAV 370

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            F  +LRP ++F   E+L   + EDE++  ++ +
Sbjct: 371 DFAAFLRPMVRFDSAEELVDQLKEDERRTEELTD 404


>gi|154175170|ref|YP_001408018.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter curvus 525.92]
 gi|112803302|gb|EAU00646.1| riboflavin biosynthesis protein RibF [Campylobacter curvus 525.92]
          Length = 288

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 48/299 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPP 75
            VAIG+FDG+H GH  +L+Q   +     + V+  N     P  +    S+ P F     
Sbjct: 15  AVAIGHFDGVHRGHKQLLKQ---LGEYGGLVVIDKNKANITPGLKRAEYSNYPCFFYDFE 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           SI+                        S E+FI  +  ++  +K ++ G  FRFG++RA 
Sbjct: 72  SIK----------------------GLSGEEFIALLKRDFKNLKKIVVGYDFRFGRNRAW 109

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQI-----VSSSNIRTALTKGHVLNAAHLLGYRF 190
           D+  L++         +F  E+            V SS IR  + +G V  A  L+G  +
Sbjct: 110 DKHDLKR---------LFDGEVVVVDEVCFNCMGVHSSAIRELIKQGDVSGANRLIGREY 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +IE DVI G+ +G     PT N+ +   +L K GVYA R R    T Y  V   G   + 
Sbjct: 161 SIEGDVISGQGLGSKELVPTLNLDVKSYLLPKSGVYATRTRIGYAT-YGSVTFIGNRVS- 218

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +G   +E+ + D   ++      V F   LR  +KF+++ +LK  +  D K+AR ++
Sbjct: 219 -TDGKFSVETHVLD-EIDVSASHVAVCFIKRLRDNMKFENLNELKARIELDIKEARTMV 275


>gi|227546515|ref|ZP_03976564.1| possible FAD synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227213064|gb|EEI80943.1| possible FAD synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 374

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII------QSSSP- 68
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +           P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWVISHHGEEPA 82

Query: 69  ---IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +   +  S+ +++  +E+ G   ++   +TL  A  S   F+ + L   L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGR-LTGKLGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITDEWIDLYGHKVRVEFVGFLRPQVKFDGPDQL 358


>gi|315226103|ref|ZP_07867891.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens DSM
           10105]
 gi|315120235|gb|EFT83367.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens DSM
           10105]
          Length = 417

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 158/395 (40%), Gaps = 93/395 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHP------ 59
           +++  L +  +  VV IG FDG+H GH  +L   +++A  ++S   V+ F P P      
Sbjct: 21  KVDWPLLDAQRRSVVTIGTFDGVHKGHQAVLSTTVELARKHDSFSLVIIFTPRPSFAHLA 80

Query: 60  ----RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
               RT  +    +  L+    +E+++ + G  AL   ++T E A  +   F+ + LV  
Sbjct: 81  WKEGRTASEEEDRL-ALTSLRQREELIARQGVDALFEMEYTPEFAQTTYTAFLGQ-LVGK 138

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKSQIV--------- 165
           + ++T++ G   R GKDR+GD   ++   +  G F    +D+        V         
Sbjct: 139 VGMRTLVLGEDARLGKDRSGDIKAIRNVAQAVGVFELEVVDDQGETAGTWVPGTVTYQAP 198

Query: 166 ---------------------------------SSSNIRTALTKGHVLNAAHLLGYRFTI 192
                                            SSS++R  L  G +  A  +LG    +
Sbjct: 199 QRKGEPANPLAGMSKAQKRAYTKKHHMRPVRDWSSSHVRDCLATGRIAEARSVLGRDPQV 258

Query: 193 ESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYA---IRFRTQDQTSYSGVAN----- 243
              V+HG+  GR LGFPTAN+       +  +GVYA   + +   D +   G A+     
Sbjct: 259 AGVVVHGDARGRDLGFPTANVGGYREGFIPVDGVYAGYLLDYGFGDGSVSEGAASRQEDL 318

Query: 244 ----------FGRNPTMVPNG----------------PLLLESFIF-DFSQEIYGQRCTV 276
                       R P  +P                     +E+++      ++YG R  V
Sbjct: 319 SGHPYREFDGRDREPARLPAAISVGLNDTFHEAGEDVSRTIEAYVLGSHDLDLYGHRVAV 378

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            F  +LRP ++F   E+L   + EDE++  ++ + 
Sbjct: 379 DFAAFLRPMVRFDSAEELVDQLKEDERRTEELTDG 413


>gi|331696909|ref|YP_004333148.1| cytidyltransferase-related domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326951598|gb|AEA25295.1| cytidyltransferase-related domain protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 264

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 27/280 (9%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIF 70
           +P  L+ G+VAIG FDG+H GH  ++ +A + A+   +   V++F+ HP ++++      
Sbjct: 1   MPPALRAGIVAIGQFDGVHRGHRELVSRARRKADELGVAAGVVTFSRHPASLLRPLE--- 57

Query: 71  TLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
              PPS+     + ++L + G   ++    +          F+   L+  L+ ++++ G 
Sbjct: 58  --EPPSLCTLHDKVEMLVESGADFVVALPVSARLLQTPPADFVTTTLLRDLQARSIVVGA 115

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG    GD G+L+  G  +G   + +D L  ++   VSS+ IR  +  GHV  AA L
Sbjct: 116 NFRFGHKAVGDAGLLRDIGRAHGTDVLIVDLLDVDEGP-VSSTRIRGLIAAGHVHAAARL 174

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG    ++S V    +   T  F    M  +P      GVY +    +D TS     N  
Sbjct: 175 LGREHRLDSVVTAHRQDVITARFRAGVMPPAP------GVYEVAV--EDLTSL----NRT 222

Query: 246 RNPTMVPNGPLLLESFIF--DFSQEIYGQRCTVSFFDYLR 283
           R  T    GP      +    F++     +  +SF  ++R
Sbjct: 223 RQTTAATIGPARSARILAPPSFARPPVDGQVRLSFLRHVR 262


>gi|223039665|ref|ZP_03609951.1| riboflavin biosynthesis protein RibF [Campylobacter rectus RM3267]
 gi|222879048|gb|EEF14143.1| riboflavin biosynthesis protein RibF [Campylobacter rectus RM3267]
          Length = 293

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 38/290 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPP 75
            VAIG+FDG+H GH  +L+   ++     + V+  N     P  +    S  P F     
Sbjct: 15  AVAIGHFDGVHRGHKELLK---RLGVYGGLVVIDKNKANITPGLKRAEYSRYPCFL---- 67

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
                            Y F  E    S ++FI  +  ++  ++ ++ G  FRFG++RA 
Sbjct: 68  -----------------YDFN-EIKGLSGDEFIALLKRDFKNLQKIVVGFDFRFGRNRAW 109

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D+  L++    +    V +DE    +   V SS IR  + +G +  A  LLG  ++IE  
Sbjct: 110 DKHDLRR---IFDGEAVIVDEF-CFEGMGVHSSAIREYIKQGEIYRANRLLGREYSIEGR 165

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+ IG     PT N+ +   +L +EGVYA R R   +T Y  V   G    M  +G 
Sbjct: 166 VIKGQGIGSRELVPTLNLDVKSYLLPREGVYATRTRIGYKT-YGSVTFIGNR--MSTDGS 222

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             +E+ + +     + +   V F   LR   +F+ +E+LK  +G D K+A
Sbjct: 223 FSIETHVLN-ENIAHARDVAVCFIKRLRDNRRFESLEELKGQIGIDIKQA 271


>gi|154148098|ref|YP_001406574.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter hominis ATCC BAA-381]
 gi|153804107|gb|ABS51114.1| riboflavin biosynthesis protein RibF [Campylobacter hominis ATCC
           BAA-381]
          Length = 282

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 38/290 (13%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIGNFDGIH  H ++++   K++ N  + V+  N +             L+P   +E  
Sbjct: 15  IAIGNFDGIHKAHQVLIK---KLSENGAVVVI-LNENK-----------NLTPYKFRE-- 57

Query: 82  LEKMGFSALIRYKFTLETA-NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                FS L    F L T  N S  +F+  +  ++  +  ++ G  FRFGKDRA D   L
Sbjct: 58  ----NFSNLPFIYFELNTLRNLSGGEFLDFLSEKFPHLNKIVVGYDFRFGKDRAFDTNFL 113

Query: 141 QKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +K   GE Y      I+ +       V SS I+  L KG + NA   LG  + I  +++ 
Sbjct: 114 RKNFSGEVYVMPEFKIEGIG------VHSSLIKDFLDKGELENAKKFLGRDYEISGEIVK 167

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF--GRNPTMVPNGPL 256
           G+ +G+     T N+      L K GVY+  F + D +++    +F   R  T   +G  
Sbjct: 168 GQGLGKVSLVATLNILADNFYLPKNGVYS-SFCSLDNSAWQKSVSFIGVREST---DGNF 223

Query: 257 LLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            +E+ I + FS + Y + C + F  +LR   KF D+  LK  + ED + A
Sbjct: 224 AIETHILENFSDKNY-KNCRIKFIKFLRENRKFSDLNALKSQISEDIQNA 272


>gi|195868008|ref|ZP_03080003.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
 gi|195660300|gb|EDX53562.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
          Length = 288

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 29/274 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L      +N    ++L+F   PR     +  +F      IQ+  
Sbjct: 22  LVIGFFDGIHLGHMSLL------SNPENRSILTFKRIPR----KTKNLFEFDE-RIQQ-- 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +GF  +  Y   +   N    +FI+++L   L    +I G  F +G DR     + +
Sbjct: 69  LEDLGFKNIFVYD--IFENNLIGTEFIEQILAP-LSPNKIIVGANFTYGNDRCNAYSLKK 125

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                  +  V I E+  N    +S+S I+  +    +  A  LL   +    +V++G +
Sbjct: 126 -------YFNVEIKEITYN----ISTSRIKELIINKQIELANELLIKPYYRVGNVVYGNQ 174

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           I R+LGF TAN+     ++ + EGVY       D   Y  V   G   T+      ++E+
Sbjct: 175 IARSLGFNTANILCDNSLIDIAEGVYQAEV-VFDNQKYDSVVYLGIPKTIHSRSYSMIEA 233

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            I +FSQ+IY +   + F  YL P +KF  + +L
Sbjct: 234 HILNFSQDIYCKEIKIIFLKYLAPNLKFNSVNEL 267


>gi|289765907|ref|ZP_06525285.1| LOW QUALITY PROTEIN: riboflavin kinase [Fusobacterium sp. D11]
 gi|289717462|gb|EFD81474.1| LOW QUALITY PROTEIN: riboflavin kinase [Fusobacterium sp. D11]
          Length = 198

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 9/179 (5%)

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAH 184
           F FGK   G    L+   E    H + + EL       ++VSSS IR  +       A  
Sbjct: 4   FSFGKGGVGKAEDLEYLAE---IHNIKVTELPPVTLDGELVSSSAIRKKIANSDFDGAVK 60

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVA 242
           LL +   I  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+ S    GV 
Sbjct: 61  LLDHPMIIIGEVIHGKKIARELGFPTTNIKMDNRLYPPSGIYGAFLQVGDKNSKVLYGVV 120

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           N G NPT+     + LE  I DF++E+YG++  +    ++R E KF  I++LK  +  D
Sbjct: 121 NVGYNPTL--KHEMSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKATIQAD 177


>gi|167753688|ref|ZP_02425815.1| hypothetical protein ALIPUT_01969 [Alistipes putredinis DSM 17216]
 gi|167658313|gb|EDS02443.1| hypothetical protein ALIPUT_01969 [Alistipes putredinis DSM 17216]
          Length = 251

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 27/268 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE----QAIKIANNSPITVLSFN 56
           M VFH  E   +LP+  +     +G++DG+H GH ++L+    +A  +   S   VL+F 
Sbjct: 1   MRVFHGFE---NLPS-FRSPAATVGSYDGVHSGHRVLLDRIRREAAAVGGES--IVLTFA 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PHPR  + +   +  L+  S++EKI  L++ G   LI   F    +   +E F++  L+ 
Sbjct: 55  PHPRVTLGTQERLRLLT--SLEEKIYLLDRFGIDNLIVIPFDRAFSRIPSESFVKDYLIG 112

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            + VK ++ G   RFG D+ GD  +L    +++GF    I E ++  ++ VSS+ IR  +
Sbjct: 113 KVGVKNLVVGFNHRFGHDKEGDYRLLNGLHDEFGFRVTEI-EKQDVDAEKVSSTVIRRLI 171

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  AA +L + + +  DV          G   +   L   +L   G Y +R   + 
Sbjct: 172 ERGEMNKAARMLSHPYLLAGDV-------DCAGHIASGEALK--LLPPPGEYPVRIEGRP 222

Query: 235 ---QTSYSGVANFGRNPTMVPNGPLLLE 259
              + +  G     R    +P+G +L+E
Sbjct: 223 GVLRITAKGTPELLRTAGKMPSGHILIE 250


>gi|2444455|gb|AAB71604.1| hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 307

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 164 IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE 223
           + SSS +R  + +G V  A  LLG  F ++  V+ G   GR +GFPTAN+    ++    
Sbjct: 155 VASSSRVREYILEGRVSAARRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAP 214

Query: 224 GVYAIRFRTQDQ---TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
           GVYAIR +   +   T + G AN G  PT      + +E+ + DF+ ++YG+   V F D
Sbjct: 215 GVYAIRVQLPGESKGTWHGGAANIGVKPTFGGT-EVTIEAHLLDFTGDLYGKELRVQFLD 273

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            LRPE +F  + +L   +  D + AR ++
Sbjct: 274 RLRPEQRFGSVVELTGQIKRDVEAARAVI 302


>gi|154486786|ref|ZP_02028193.1| hypothetical protein BIFADO_00612 [Bifidobacterium adolescentis
           L2-32]
 gi|154084649|gb|EDN83694.1| hypothetical protein BIFADO_00612 [Bifidobacterium adolescentis
           L2-32]
          Length = 409

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 159/388 (40%), Gaps = 100/388 (25%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG+FDG+H GH  ++ +  ++A        V+ F+P P  +   ++      PP
Sbjct: 23  KKSVVTIGSFDGMHQGHQAVIRRVAELAEQEQAFSVVVLFDPRPALVHAYAAKHDGQEPP 82

Query: 76  ----------SIQEKI--LEKMG--FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     S+ E++  ++ +G  ++ ++RY       +Y   +F    +V  L ++T+
Sbjct: 83  AGTPDTQALTSVDERLRAIDAIGVDYTLIVRYTMAFSAKSY---RFFLGQMVGKLGMRTL 139

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL----------------------- 157
           + G+    G +RAG+   ++      G F    +D+                        
Sbjct: 140 VLGSDAAMGANRAGNVKAIENLALATGVFQLEVVDDFGPGLTRVPVNAKPVMPSEPGEPS 199

Query: 158 ------------------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
                             +  + +  SS+N+R  L++G + +A  +LG+   +E  V+HG
Sbjct: 200 DPLEGASKAERRAWSKKHQAKEVRTWSSTNVRYLLSQGRIKDADAILGHAHAVEGTVVHG 259

Query: 200 EKIGRTLGFPTANMQLS-PDILLKEGVYA------------------------------- 227
           E+ GRT+GFPTAN+  +    L  +GVYA                               
Sbjct: 260 EERGRTIGFPTANLSENVAGYLPVDGVYAGWLVDLGEKSADGGEEAGEKPADGVSQQYDA 319

Query: 228 ----IRFRTQDQTSYSGVANFGRNPTMVPNGPL--LLESF-IFDFSQEIYGQRCTVSFFD 280
                R   Q    +    + G  PT   +G    ++E++ I D   ++YG +  V F  
Sbjct: 320 SSVNARVAMQSPHRWPAAISIGTKPTFNEDGDAERVVEAYAITDDWLDLYGHQARVEFAG 379

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +LRP+IKF   + L + +  + ++ +++
Sbjct: 380 FLRPQIKFDSADDLVVELKRNVEETKRL 407


>gi|325970201|ref|YP_004246392.1| riboflavin kinase [Spirochaeta sp. Buddy]
 gi|324025439|gb|ADY12198.1| Riboflavin kinase [Spirochaeta sp. Buddy]
          Length = 230

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KE 223
           +SS  I+TAL    + +A  +LGY +T+  +V++G ++GRT+G PT N++++ + LL   
Sbjct: 84  ISSERIQTALLAAQIEDAEAMLGYPYTLSGEVVYGRQLGRTVGMPTVNLKIADEKLLPAH 143

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYL 282
           GVY       D   Y GV + G  PT V N P + +E+F+  F++++YGQ  ++    ++
Sbjct: 144 GVYG-TITIVDGVRYLGVTSIGLRPT-VDNLPHITIETFLLHFNRDLYGQHISLELKTFI 201

Query: 283 RPEIKFKDIEKLKIYMGED 301
           RP  KF+ +E ++  + ED
Sbjct: 202 RPITKFESLEAVRKKVDED 220


>gi|239621512|ref|ZP_04664543.1| riboflavin kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239515387|gb|EEQ55254.1| riboflavin kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 374

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG   +IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHSIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358


>gi|331699777|ref|YP_004336016.1| cytidyltransferase-related domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326954466|gb|AEA28163.1| cytidyltransferase-related domain protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 279

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 3/177 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF 70
           +P+     VV +G FDG+H GH  ++  A+++  A   P  +++F+PHP  ++       
Sbjct: 21  IPDGWGRCVVTLGVFDGVHRGHAHLIGSAVRLGRARRLPTVLVTFDPHPAKVLGLPRDTA 80

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS    + ++  ++G  A+    FT   A   A  F  +VLV  L    V+ G+ F FG
Sbjct: 81  ALSTVERRAELAHQLGVDAVCVVPFTAALARVEAGDFAAQVLVGALHADAVVVGSNFTFG 140

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
               GD   L++ GE++GF T  +  L    +   SS+ IR  L +G V+ AA  LG
Sbjct: 141 HRGTGDVDALRRLGEEHGFSTHPVGLLHAVGTPC-SSTYIRGCLARGDVVAAARALG 196


>gi|282850807|ref|ZP_06260181.1| putative riboflavin biosynthesis protein RibF [Lactobacillus
           gasseri 224-1]
 gi|282557759|gb|EFB63347.1| putative riboflavin biosynthesis protein RibF [Lactobacillus
           gasseri 224-1]
          Length = 199

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+  TV+ G  + +G     +   L K  +  G   + ++  ++     V S+ IR A+ 
Sbjct: 3   LKADTVVVGFDYTYGPKDIANVENLPKFAQ--GRFQIMVEPKQSIDKIKVGSTYIRKAIQ 60

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD 234
            G+V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +   
Sbjct: 61  HGNVELAAALLGQPYETSGIIVHGFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKING 120

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  +  + + G N T   N  L +E+ IF+F +E YG+  T+S++ ++R   KF  IE+L
Sbjct: 121 KW-HDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGKPLTLSWYKFIRSNKKFSGIEEL 179

Query: 295 KIYMGEDEKKARK 307
              + +D++  ++
Sbjct: 180 SRQLDQDKRNIKQ 192


>gi|291516437|emb|CBK70053.1| FAD synthase [Bifidobacterium longum subsp. longum F8]
          Length = 374

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +   ++      P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWAASHHGEEPA 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ +++  +E+ G   ++   +TL  A  S   F+ ++  + L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGK-LGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG    IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHAIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358


>gi|119025375|ref|YP_909220.1| riboflavin kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764959|dbj|BAF39138.1| riboflavin kinase [Bifidobacterium adolescentis ATCC 15703]
          Length = 409

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 159/388 (40%), Gaps = 100/388 (25%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG+FDG+H GH  ++ +  ++A        V+ F+P P  +   ++      PP
Sbjct: 23  KKSVVTIGSFDGMHQGHQAVVRRVAELAEQEQAFSVVVLFDPRPALVHAYAAKHDGQEPP 82

Query: 76  ----------SIQEKI--LEKMG--FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     S+ E++  ++ +G  ++ ++RY       +Y   +F    +V  L ++T+
Sbjct: 83  AGTPDTQALTSVNERLRAIDAIGVDYTLIVRYTMAFAAKSY---RFFLGQMVGKLGMRTL 139

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL----------------------- 157
           + G+    G +RAG+   ++      G F    +D+                        
Sbjct: 140 VLGSDAAMGANRAGNVKAIENLALATGVFQLEVVDDFGPGLTRVPVNAKPVMPSEPGEPS 199

Query: 158 ------------------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
                             +  + +  SS+N+R  L++G + +A  +LG+   +E  V+HG
Sbjct: 200 DPLEGASKAERRAWSKKHQAKEVRTWSSTNVRYLLSQGRIKDADAILGHAHAVEGTVVHG 259

Query: 200 EKIGRTLGFPTANMQLS-PDILLKEGVYA------------------------------- 227
           E+ GRT+GFPTAN+  +    L  +GVYA                               
Sbjct: 260 EERGRTIGFPTANLSENVAGYLPVDGVYAGWLVDLGEKSADGGEEAGEKPADGVSQQYDA 319

Query: 228 ----IRFRTQDQTSYSGVANFGRNPTMVPNGPL--LLESF-IFDFSQEIYGQRCTVSFFD 280
                R   Q    +    + G  PT   +G    ++E++ I D   ++YG +  V F  
Sbjct: 320 SSVNARVDMQSPHRWPAAISIGTKPTFNEDGDAERVVEAYAITDDWLDLYGHQARVEFAG 379

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +LRP+IKF   + L + +  + ++ +++
Sbjct: 380 FLRPQIKFDSADDLVVELKRNVEETKRL 407


>gi|163784311|ref|ZP_02179220.1| riboflavin biosynthesis protein RibF [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880421|gb|EDP74016.1| riboflavin biosynthesis protein RibF [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 167

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 156 ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
           EL+ N  Q +SSS+IR  L KG + +  HLLG  + +  ++I G KIG  +GFPT N+++
Sbjct: 5   ELKGN--QKISSSDIREFLKKGKIEDVNHLLGRIYCLTGNIIRGNKIGSKIGFPTINIKV 62

Query: 216 SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIY--GQR 273
             ++ LK GVY       ++  Y  V N+GR PT+     +L    I  F+++ +   ++
Sbjct: 63  DENLCLKTGVYVGYIEVGNE-EYRAVINWGRRPTVDGKNKVLEVHIIEGFNEKAFLENKK 121

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGED 301
             V F  Y+R EIKF++I +LK  + +D
Sbjct: 122 PKVYFLHYVRNEIKFENIHQLKEQIKKD 149


>gi|299822207|ref|ZP_07054093.1| riboflavin kinase/FMN adenylyltransferase [Listeria grayi DSM
           20601]
 gi|299815736|gb|EFI82974.1| riboflavin kinase/FMN adenylyltransferase [Listeria grayi DSM
           20601]
          Length = 244

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTL-SPP 75
           +  V+ IG FDG+HLGH  IL+QA+K+   S I   +SF+PHP   ++       + +PP
Sbjct: 16  RPAVLTIGKFDGVHLGHQYILKQALKLKQPSEILATISFSPHPLWALKRMEDYREMITPP 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L   G   L    FT   A  S E+F+ + L   L +  +  G +F FGK R  
Sbjct: 76  REKAYWLGHYGVDRLFETAFTAAYAETSPEEFVCEHLAN-LNLSHICVGEEFNFGKGRHS 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+   E +G   V +  +  N  +I SS+ IR+ L +G    A  LLG+ + +   
Sbjct: 135 DVELLRDLAEPFGIKVVAVPVVPMNNEKI-SSTYIRSLLRRGAFKEAERLLGHAWYVNGV 193

Query: 196 VIHG 199
           V  G
Sbjct: 194 VKDG 197


>gi|152974777|ref|YP_001374294.1| cytidyltransferase-like protein [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023529|gb|ABS21299.1| cytidyltransferase-related domain [Bacillus cytotoxicus NVH 391-98]
          Length = 288

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 12/240 (5%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ-S 65
           I+++L    +  V+A+G FDG+H+GH  ++  A +IAN   IT  V++F PHP+ ++  S
Sbjct: 5   ISKTLREETEECVLALGFFDGVHIGHRKLIRTAKEIANQKKITFAVMTFYPHPKEVVSPS 64

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
             P+  L+P  ++E+  + MG   LI  KF    A  S ++F++  ++ +   K V+ G 
Sbjct: 65  DGPMKYLTPLKVKEERFKNMGVEKLIVVKFDPVFARLSNQEFVETYIIGFC-CKHVVAGF 123

Query: 126 KFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            + +G    G+  +L+++G+ K+   T+   E R++K   +SS+ IR  L+ G   +  +
Sbjct: 124 DYHYGYKGRGNMQLLKEQGQNKFEVTTIPKIEHRHHK---ISSTAIRKLLSHGATHDIPN 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVAN 243
            LG  + I   V        T  F    + +  D +L   GVY I     DQ  Y GV  
Sbjct: 181 YLGDYYEIRGIVQKSSLFYETYRF--IEVFVEQDYMLPVPGVYHIVVEI-DQIFYKGVCQ 237


>gi|157165726|ref|YP_001467144.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter concisus 13826]
 gi|112801445|gb|EAT98789.1| riboflavin biosynthesis protein RibF [Campylobacter concisus 13826]
          Length = 297

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 47/299 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPP 75
            VAIG+FDG+H GH  +L+Q   +     + V+  N     P  +    S+ P F     
Sbjct: 15  AVAIGHFDGVHRGHKQLLKQ---LGEFGGLVVIDKNKANITPKLKRAEYSNYPCFLYDFE 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           SI+                        S E+FI  +  ++  +K ++ G  FRFG++RA 
Sbjct: 72  SIK----------------------GLSGEEFIALLKRDFKNLKKIVVGFDFRFGRNRAW 109

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQI-----VSSSNIRTALTKGHVLNAAHLLGYRF 190
           D+  L++         +F  E+            V SS+IR  + +G++  A  L+G  +
Sbjct: 110 DKHDLKR---------IFDGEVVVVDEVCYDGMGVHSSSIRELIRQGNIDEANRLIGREY 160

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +IE +VI G+ IG      T N+ +   +L +EGVYA R R    T Y  V   G    +
Sbjct: 161 SIEGNVIKGQGIGAKELVATLNLDIKSYLLPREGVYATRTRMGSYT-YGSVTFIGNR--L 217

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +G   +E+ I D       +   V F   LR   KF ++ +LK  +  D  +AR+ +
Sbjct: 218 STDGNFSVETHILDEVAPKVTKHVAVCFIKRLRDNKKFNNLSELKEQIKRDINEARQCV 276


>gi|308233950|ref|ZP_07664687.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
 gi|328943962|ref|ZP_08241427.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
 gi|327491931|gb|EGF23705.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
          Length = 419

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 138/337 (40%), Gaps = 50/337 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPI---FTLSPP 75
            VA G FDG H+GH  +L + ++ A+   +T  V++F+P P +++ S +P      L   
Sbjct: 71  CVAFGVFDGFHVGHQRLLHKTLESAHAHNLTSAVVTFDPDPSSVLHSQAPASCALDLDAC 130

Query: 76  SIQEK----ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            +  K    ++ +     ++   FT   A    ++F+  V+++ L  + +  G  F+ G 
Sbjct: 131 LLTTKQRLELIARTHVDLIVVVAFTPALAKLEYQKFLTDVVMKCLAPRIIHVGADFKMGY 190

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              GD   L+  G  +    VF   L  +   ++S++ IRT L  G +  A   L   ++
Sbjct: 191 RGQGDIAALRAFGSLHDI-DVFGHGLAVDNEVVISATLIRTLLQNGDIDLATRYLTRFYS 249

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +   VIHG   G   GF TAN+    +  + + GVY      Q+   Y    N G +PT 
Sbjct: 250 LSGKVIHGRGKGSGFGFATANILCQANHCVPQPGVYMACVVCQNHI-YPAAVNVGISPTF 308

Query: 251 -------------------VPNGPL-------------------LLESFIFDFSQEIYGQ 272
                                NG                      LE+ +  F+ +IYGQ
Sbjct: 309 SSEIYENEQGKVQDNLQNNAQNGSQDNVEKTTHDSRRRLLSRQGFLEAHLLGFTGDIYGQ 368

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              V F   +R   KF+ +  L   + ++ K+ +  L
Sbjct: 369 TVDVIFVKRMRDARKFESVSALIKVVHDNIKEVKNCL 405


>gi|261885986|ref|ZP_06010025.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 254

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 104 AEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK--RGEKYGFHTVFIDELRNNK 161
            ++F++ +  E+  +K ++ G  F+FGKDRA D+  L+    GE    +    D L    
Sbjct: 38  GDEFLKLLQNEFPNLKRIVVGYDFKFGKDRAWDKHDLKNLFHGEVLVVNEFSFDGLG--- 94

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
              V SS IR  L  G +  A  LLG  ++I+  VI G+ +G+   +PT N+ + P I  
Sbjct: 95  ---VHSSAIRRFLRDGDIYRANRLLGREYSIKGRVISGQGLGKKSIYPTLNLVVEPYITP 151

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF--DFSQEIYGQRCTVSFF 279
           K GVYA R +  D T YS +   G   T   +G   +ES +F  D    IY  R  V F 
Sbjct: 152 KNGVYATRTKIGDDT-YSSITFIGNRFT--TDGAFSIESHLFDVDLKDNIYEVR--VCFI 206

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRII 322
           + +R   KF  +++LK  + +D   AR + +    LS +D  I
Sbjct: 207 ERIRDNFKFNSLDELKTQISKDMLIARNVAKCC-DLSLQDDYI 248


>gi|23466168|ref|NP_696771.1| protein RibF [includes: riboflavin kinase (flavokinase); FMN
           adenylyltransferase [Bifidobacterium longum NCC2705]
 gi|312133912|ref|YP_004001251.1| ribf [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689891|ref|YP_004209625.1| riboflavin kinase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691832|ref|YP_004221402.1| riboflavin kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|23326907|gb|AAN25407.1| protein RibF [includes: riboflavin kinase (flavokinase); Fmn
           adenylyltransferase [Bifidobacterium longum NCC2705]
 gi|311773206|gb|ADQ02694.1| RiBF [Bifidobacterium longum subsp. longum BBMN68]
 gi|320456688|dbj|BAJ67310.1| riboflavin kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320461227|dbj|BAJ71847.1| riboflavin kinase [Bifidobacterium longum subsp. infantis 157F]
          Length = 374

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 67/340 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII------QSSSP- 68
           K  VV +G FDG+HLGH  ++++ +++A+       V+ F+P P  +           P 
Sbjct: 23  KKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWVISHHGEEPA 82

Query: 69  ---IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +   +  S+ +++  +E+ G   ++   +TL  A  S   F+ + L   L ++T++ 
Sbjct: 83  VQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAAMSYIFFLGR-LTGKLGMRTLVL 141

Query: 124 GTKFRFGKDRAGD---------------RGILQKRG------------EKYGFHTVFIDE 156
           G     GK R GD                 ++  RG            E        +D 
Sbjct: 142 GQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDP 201

Query: 157 LRN------------NKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L N            N+++ +   SS+N+R  L  G + +A  +LG   +IE +V+HGE+
Sbjct: 202 LANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHSIEGEVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-- 256
            GRT+GFPTAN  L  DI   +  +GVYA  +    +  +    + G  PT      L  
Sbjct: 262 RGRTIGFPTAN--LGSDIAGYIPVDGVYA-GWLVDGENRWPAAISIGTKPTFSEKTGLNE 318

Query: 257 -LLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++E++ I +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 319 RVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358


>gi|12044997|ref|NP_072807.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|255660295|ref|ZP_05405704.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|1351498|sp|P47391|RIBF_MYCGE RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|3844738|gb|AAC71363.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|166078649|gb|ABY79267.1| riboflavin biosynthesis protein RibF [synthetic Mycoplasma
           genitalium JCVI-1.0]
          Length = 269

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 32/289 (11%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           IG FDG+H GH L L+Q  K     P+ +L  NP P   ++ ++ ++ L     Q K   
Sbjct: 6   IGYFDGLHQGH-LFLKQNSKF---EPMVLLIDNP-P---LKQTNWLYDLQQRVAQIKTYL 57

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           K          F +   N +A  F ++  ++ L    +I GT + FG D     GI  K+
Sbjct: 58  KATVEV-----FDVAKHNMNALSFFEQQ-IKRLNCDEIIVGTDWHFGNDHKD--GIWLKK 109

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
             K   +TV +     NK+ + SSS IR  LT   +  A  LL   +     V+HG K  
Sbjct: 110 LFK---NTVIV-----NKTNL-SSSVIRNYLTNNELEKANQLLVEPYYRVGTVVHGLKKA 160

Query: 204 RTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
           R LGFPTAN+ +   +L L +G Y +R    +QT Y G+    +      +  L+ E+ I
Sbjct: 161 RLLGFPTANIVMDNHLLTLNKGSYIVRVLLNNQTFY-GIGFISQ-----KDQDLVCETHI 214

Query: 263 FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F+F+ EIYG     +   ++R   KF     L+  +  D   A K LE+
Sbjct: 215 FNFNNEIYGSLVKFTLLKFIRTISKFSSQAALQKAIQSDANFALKWLEN 263


>gi|294502570|ref|YP_003566632.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
 gi|294353029|gb|ADE63370.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
          Length = 152

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 1/151 (0%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           +SS+ IR AL    ++ A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +G
Sbjct: 3   ISSTAIRQALHDDDLVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKG 62

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
           VYA+       T   GVAN G  PT V      LE  + D + ++YG    V     LR 
Sbjct: 63  VYAVDVYGLGSTPLYGVANIGTRPT-VAGVRQQLEVHLLDVTMDLYGCHIDVVLRAKLRN 121

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           E +F  +E LK  +  D   AR       P+
Sbjct: 122 EQRFASLEALKQQIANDVVTARTFFGLKTPV 152


>gi|329767230|ref|ZP_08258757.1| hypothetical protein HMPREF0428_00454 [Gemella haemolysans M341]
 gi|328836897|gb|EGF86544.1| hypothetical protein HMPREF0428_00454 [Gemella haemolysans M341]
          Length = 195

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L ++ V  G  +RFG    G   ++++ G           E+     Q +    I T + 
Sbjct: 4   LNIEKVFCGFDYRFGNKGLGTPKLIEENG----------IEISVQNEQTIDGEKISTTVL 53

Query: 176 KGHVLNAA-----HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAI 228
           K  V +          G  ++I   V+ G ++GRT+ FPTAN+QLS   LL E  GVY  
Sbjct: 54  KKFVRDGEFQKYREYSGRFYSISGLVVKGRQLGRTINFPTANLQLSEKYLLPETNGVYIT 113

Query: 229 RFRTQDQTSYSGVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           + +   +  Y  + N G NPT+        +E+ I DF ++IYG++  + F+++LR E K
Sbjct: 114 KLKVHSEI-YKSITNIGYNPTVSTEKNKKFIETHILDFDEDIYGEKIEIFFYEFLRKEQK 172

Query: 288 FKDIEKLKIYMGEDEKKARK 307
           F+  + LK  +  D+K + +
Sbjct: 173 FESFDHLKEQLKLDKKTSEE 192


>gi|306823532|ref|ZP_07456907.1| possible FAD synthetase [Bifidobacterium dentium ATCC 27679]
 gi|309802973|ref|ZP_07697074.1| riboflavin kinase [Bifidobacterium dentium JCVIHMP022]
 gi|304553239|gb|EFM41151.1| possible FAD synthetase [Bifidobacterium dentium ATCC 27679]
 gi|308220440|gb|EFO76751.1| riboflavin kinase [Bifidobacterium dentium JCVIHMP022]
          Length = 405

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 96/384 (25%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG+FDG+H GH  ++ + +++A    S   V+ F P P  +   ++      PP
Sbjct: 23  KKSVLTIGSFDGMHQGHQAVIRRVVELARKERSFSVVVLFEPRPAMVHGYAAKHDGQEPP 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ E++  +  +G    I  ++TLE A  S   F+ + +V  L ++ ++ 
Sbjct: 83  VGMLDTQALTSVDERLRNINALGVDYTIIVRYTLEFAAKSYRFFLGQ-MVGKLGMRALVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFI---------------------------DE 156
           G     G +RAGD   ++      G   +++                           D 
Sbjct: 142 GADAALGANRAGDVKAIENLALATGVFQLYVVDDHGPGETRVPANAKPVMPADHGEPADP 201

Query: 157 LRNNKS---------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           L                    ++ SS+N+R  L +G + +A  +LG+   +E  V+HGE+
Sbjct: 202 LEGATKAERRAWSKKHQAKAVRVWSSTNVRYLLGQGRIKDADAILGHMHAVEGTVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYA------------------------------I 228
            GRT+GFPTAN  LS D+   L  +GVYA                               
Sbjct: 262 RGRTIGFPTAN--LSQDVFGYLPVDGVYAGWLVDLGKAGDEAGKPADGIATAYDSSSMDA 319

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVSFFDYLRP 284
           R        +    + G  PT      +   ++E++ I D   ++YG +  V F  +LRP
Sbjct: 320 RLAPHSPYRWPAAISIGTKPTFNEATGMHERVVEAYAITDDWLDLYGHQVRVEFAGFLRP 379

Query: 285 EIKFKDIEKLKIYMGEDEKKARKI 308
           +I+F   + L   +  + ++ +++
Sbjct: 380 QIRFASADDLAAELRRNVEETKRL 403


>gi|224283747|ref|ZP_03647069.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140903|ref|ZP_07803096.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133413|gb|EFR51030.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
          Length = 419

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 161/394 (40%), Gaps = 104/394 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI--------IQSSSPIF 70
           VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +         Q     F
Sbjct: 26  VVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPGDGF 85

Query: 71  --TLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             +++  S+ +++  LE +G   ++  ++TL  A  S   F+ + +V  L ++T++ GT 
Sbjct: 86  RDSMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQ-MVGKLGMRTLVLGTD 144

Query: 127 FRFGKDRAGDRGILQKRGEKYG-FHTVFIDE----------------------------- 156
              G +RAGD   +    +  G F    +D+                             
Sbjct: 145 AAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDPTEG 204

Query: 157 -----LR-------NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
                LR         + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+ GR
Sbjct: 205 MTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEERGR 264

Query: 205 TLGFPTANMQLSPDILLK-EGVYAIRF--------------RTQDQTSYSGVA------- 242
           T+GFPTAN+    D  +  +GVYA                    D  S SG A       
Sbjct: 265 TIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGATAGSDENASDDNSGSGNASVIPRVY 324

Query: 243 ---------------------NFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVS 277
                                + G  PT      L   ++E++ + D   ++YG    V 
Sbjct: 325 DSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDVRVE 384

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 385 FAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|311064859|ref|YP_003971585.1| riboflavin kinase/FMN adenylyltransferase [Bifidobacterium bifidum
           PRL2010]
 gi|310867179|gb|ADP36548.1| RibF Riboflavin kinase/FMN adenylyltransferase [Bifidobacterium
           bifidum PRL2010]
          Length = 419

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 104/394 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSS------PIFTL 72
           VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +   ++      P    
Sbjct: 26  VVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPGDGF 85

Query: 73  SPP----SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             P    S+ +++  LE +G   ++  ++TL  A  S   F+ + +V  L ++T++ GT 
Sbjct: 86  CDPMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQ-MVGKLGMRTLVLGTD 144

Query: 127 FRFGKDRAGDRGILQKRGEKYG-FHTVFIDE----------------------------- 156
              G +RAGD   +    +  G F    +D+                             
Sbjct: 145 AAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDPTEG 204

Query: 157 -----LR-------NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
                LR         + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+ GR
Sbjct: 205 MTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEERGR 264

Query: 205 TLGFPTANMQLSPDILLK-EGVYA------------------------------------ 227
           T+GFPTAN+    D  +  +GVYA                                    
Sbjct: 265 TIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGAPADSDENASDGNSGSGNASVIPRVY 324

Query: 228 ------IRFRTQDQTSYSGVANFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVS 277
                  R   +    +    + G  PT      L   ++E++ + D   ++YG    V 
Sbjct: 325 DSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDVRVE 384

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 385 FAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|261597141|gb|ACX85434.1| putative FMN adenylyltransferase [Arthrobacter sp. NyZ415]
          Length = 269

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 19/225 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +++ ++    LPN     V+++G FDG+H GH L+L +  K+A    +   V++F+P 
Sbjct: 19  MKIWNGLD---DLPNEPGRTVISLGCFDGVHRGHQLLLARLTKVAATKGAKSVVVTFDPL 75

Query: 59  PRTII-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P  ++   ++P+  ++   +++++  LE  G  A++  K+T + A+  AE F+ +  V+ 
Sbjct: 76  PAQVLYPETAPVAIMA---LEDRLSALEAAGVDAVLVIKYTRDIASQPAEDFVAQAFVKS 132

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFH-TVFIDELRNN-KSQIVSSSNIRTA 173
           L    V+ G   RFG+ RAG+   L+  G ++ F  +V  D        +  SS+  R A
Sbjct: 133 LHAAVVVVGEDCRFGRGRAGNIDTLKGAGLRWNFDVSVMSDRTAGGVGGRRYSSTWAREA 192

Query: 174 LTKGHVLNAAHLLG--YRFTIESDVIHGE---KIGRTLG-FPTAN 212
           L+ G+V  A  +LG  +R  + +    G    K+G   G  PT+ 
Sbjct: 193 LSSGNVGIAEQILGRPHRIRMRATWAAGSWTTKVGSVRGMLPTSG 237


>gi|310287986|ref|YP_003939245.1| riboflavin kinase [Bifidobacterium bifidum S17]
 gi|309251923|gb|ADO53671.1| riboflavin kinase [Bifidobacterium bifidum S17]
          Length = 419

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 157/394 (39%), Gaps = 104/394 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSP---- 74
           VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +   ++      P    
Sbjct: 26  VVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPGDGF 85

Query: 75  ------PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                  S+ +++  LE +G   ++  ++TL  A  S   F+ + +V  L ++T++ GT 
Sbjct: 86  RDPMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQ-MVGKLGMRTLVLGTD 144

Query: 127 FRFGKDRAGDRGILQKRGEKYG-FHTVFIDE----------------------------- 156
              G +RAGD   +    +  G F    +D+                             
Sbjct: 145 AAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDPTEG 204

Query: 157 -----LR-------NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
                LR         + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+ GR
Sbjct: 205 MTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEERGR 264

Query: 205 TLGFPTANMQLSPDILLK-EGVYA------------------------------------ 227
           T+GFPTAN+    D  +  +GVYA                                    
Sbjct: 265 TIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGATADSDENASDGNSGSGNASVIPRVY 324

Query: 228 ------IRFRTQDQTSYSGVANFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVS 277
                  R   +    +    + G  PT      L   ++E++ + D   ++YG    V 
Sbjct: 325 DSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDVRVE 384

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 385 FAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|212716575|ref|ZP_03324703.1| hypothetical protein BIFCAT_01503 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660279|gb|EEB20854.1| hypothetical protein BIFCAT_01503 [Bifidobacterium catenulatum DSM
           16992]
          Length = 409

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 99/373 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG+FDG+H GH  ++ + +++A    S   V+ F+P P  +   ++      PP
Sbjct: 24  KKSVVTIGSFDGMHQGHQAVIRRVVELAKKEQSFSVVVLFDPRPALVHGYAAKNGGQEPP 83

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+QE++  ++K+G    +   +TL  A  S   F+ + +V  L ++T+  
Sbjct: 84  ADMVDTQALTSMQERLRAIDKLGVDYTLIVHYTLAFAAKSYRFFLGQ-MVGKLGMRTLTL 142

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL------------------------- 157
           G+    G +RAGD   ++      G F    +D+                          
Sbjct: 143 GSDAAMGANRAGDVKAIENLALATGVFQLEVVDDRGPGETRVPANAQPVMPTGHGEPTDP 202

Query: 158 -------------RNNKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                        + N+++ V   SS+N+R  L +G + +A  +LG+   +E  V+HGE+
Sbjct: 203 LEGASKAERRAWSKKNQAKPVRVWSSTNVRYLLGQGRIKDADAILGHSHAVEGIVVHGEE 262

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYA------------------------------- 227
            GRT+GFPTAN  LS ++   L  +GVYA                               
Sbjct: 263 RGRTIGFPTAN--LSDNVAGYLPVDGVYAGWLVDLGSKTVESDHAGAASDGISQQFDSSS 320

Query: 228 IRFRTQDQTSYSGVA--NFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVSFFDY 281
           +  R  D + Y   A  + G  PT      +   ++E++ I D   ++Y  +  V F  +
Sbjct: 321 VDARLADHSPYRWPAAISIGTKPTFNEATGMNDRVVEAYAITDDWLDLYDHQVRVEFTGF 380

Query: 282 LRPEIKFKDIEKL 294
           LRP+IKF   + L
Sbjct: 381 LRPQIKFDSAQDL 393


>gi|225351006|ref|ZP_03742029.1| hypothetical protein BIFPSEUDO_02587 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158462|gb|EEG71704.1| hypothetical protein BIFPSEUDO_02587 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 409

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 99/373 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VV IG+FDG+H GH  ++ + +++A    S   V+ F+P P  +   ++      PP
Sbjct: 24  KKSVVTIGSFDGMHQGHQAVIRRVVELAKKEQSFSVVVLFDPRPALVHGYAAKNGGQEPP 83

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+QE++  ++K+G    +   +TL  A  S   F+ + +V  L ++T+  
Sbjct: 84  ADMVDTQALTSMQERLRAIDKLGVDYTLIVHYTLAFAAKSYRFFLGQ-MVGKLGMRTLAL 142

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL------------------------- 157
           G+    G +RAGD   ++      G F    +D+                          
Sbjct: 143 GSDAAMGANRAGDVKAIENLALATGVFQLEVVDDRGPGETRVPANAQPVMPTGHGEPTDP 202

Query: 158 -------------RNNKSQIV---SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                        + N+++ V   SS+N+R  L +G + +A  +LG+   +E  V+HGE+
Sbjct: 203 LEGASKAERRAWSKKNQAKPVRVWSSTNVRYLLGQGRIKDADAILGHPHAVEGIVVHGEE 262

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYA------------------------------- 227
            GRT+GFPTAN  LS ++   L  +GVYA                               
Sbjct: 263 RGRTIGFPTAN--LSDNVAGYLPVDGVYAGWLVDLGSKTAESDHAEAASDGISQQFDSSS 320

Query: 228 IRFRTQDQTSYSGVA--NFGRNPTMVPNGPL---LLESF-IFDFSQEIYGQRCTVSFFDY 281
           +  R  D + Y   A  + G  PT      +   ++E++ I D   ++Y  +  V F  +
Sbjct: 321 VDARLADHSPYRWPAAISIGTKPTFNEATGMNDRVVEAYAITDDWLDLYDHQVRVEFTGF 380

Query: 282 LRPEIKFKDIEKL 294
           LRP+IKF   + L
Sbjct: 381 LRPQIKFDSAQDL 393


>gi|229088442|ref|ZP_04220196.1| Cytidyltransferase-related domain [Bacillus cereus Rock3-44]
 gi|228694879|gb|EEL48101.1| Cytidyltransferase-related domain [Bacillus cereus Rock3-44]
          Length = 297

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 10/239 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSS 66
           I++++ +  +  V+A+G FDG+H+GH  +++ A +IA    +T  V++F PHPR I+ S+
Sbjct: 10  ISKTVRDETEECVLALGFFDGVHIGHKQLIQTAKEIARQKKMTLAVMTFYPHPRDIVHST 69

Query: 67  -SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +P+  L+P +++E+  + MG   LI  KF    A  S E+F++  ++ +   + VI G 
Sbjct: 70  QNPMKYLTPLTVKEERFKNMGVEKLIVVKFDSAFARLSYEEFVKTYIIGF-RCRHVIAGF 128

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            + +G    G+  +L+++G    F    I ++ ++  +I SS+ IR  L  G V      
Sbjct: 129 DYHYGYMGQGNMQLLKEQGRN-QFAVTTIPKIEHDHEKI-SSTAIRNLLKVGLVHAVPKY 186

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVAN 243
           L   + +   V        T  F    + +  D +L   GVY I    ++   Y GV  
Sbjct: 187 LDDYYEVRGKVEKSSSFYETYQF--LEILVDKDYMLPASGVYRIEVEIENDI-YEGVCQ 242


>gi|332712381|ref|ZP_08432308.1| FAD synthase [Lyngbya majuscula 3L]
 gi|332348855|gb|EGJ28468.1| FAD synthase [Lyngbya majuscula 3L]
          Length = 353

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 32/214 (14%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLIL-----------EQAIKIAN----NSP---- 49
           I  SL   L    VA+GNFDG+HLGH  ++            QA+  +N    ++P    
Sbjct: 3   ITSSLTTALTPTAVALGNFDGVHLGHQQVIAPILPKPVTAQAQALTSSNLEQFSNPETTG 62

Query: 50  -----------ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE 98
                       TV +FNPHPR    S      L+PP+ + + L  +G   L    F  E
Sbjct: 63  PNLDPNLELIYPTVATFNPHPREFF-SGQAWKLLTPPTEKAQQLSALGVQQLALLPFNRE 121

Query: 99  TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR 158
            A+ S ++F++K+LVE L+ + V  G  F FG  RAG    L      YG  TV I  L 
Sbjct: 122 LASLSPQEFVEKILVEQLQAQQVSVGEDFCFGHKRAGTATDLDAIASAYGI-TVHIVSLY 180

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             + Q +SSS+IR +L +G +  A   LG  +T+
Sbjct: 181 KRQDQRISSSSIRQSLAQGDIDKANRFLGRPYTL 214


>gi|167753102|ref|ZP_02425229.1| hypothetical protein ALIPUT_01373 [Alistipes putredinis DSM 17216]
 gi|167659416|gb|EDS03546.1| hypothetical protein ALIPUT_01373 [Alistipes putredinis DSM 17216]
          Length = 124

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           IE +V+HG ++GR LGFPTANM+++    ++ GVY   +   D   Y  ++N G NP+ V
Sbjct: 5   IEGEVMHGRQLGRELGFPTANMEVADADTIESGVYE-SYVEIDGVEYKAMSNLGSNPS-V 62

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             GP  LE+ IFDFS ++YG+R  V     +R E KF  +E+L+
Sbjct: 63  GGGPRHLETHIFDFSGDLYGRRLRVELRRKIRDERKFDSLEELQ 106


>gi|171741235|ref|ZP_02917042.1| hypothetical protein BIFDEN_00309 [Bifidobacterium dentium ATCC
           27678]
 gi|283455402|ref|YP_003359966.1| riboflavin kinase/FMN adenylyltransferase [Bifidobacterium dentium
           Bd1]
 gi|171276849|gb|EDT44510.1| hypothetical protein BIFDEN_00309 [Bifidobacterium dentium ATCC
           27678]
 gi|283102036|gb|ADB09142.1| ribF Riboflavin kinase/FMN adenylyltransferase [Bifidobacterium
           dentium Bd1]
          Length = 405

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 96/384 (25%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG+FDG+H GH  ++ + +++A    S   V+ F P P  +   ++      PP
Sbjct: 23  KKSVLTIGSFDGMHQGHQAVIRRVVELARKERSFSVVVLFEPRPAMVHGYAAKHDGQEPP 82

Query: 76  ----------SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                     S+ E++  +  +G    I   +TLE A  S   F+ + +V  L ++ ++ 
Sbjct: 83  VGMLDTQALTSVDERLRSINALGVDYTIIVHYTLEFAAKSYRFFLGQ-MVGKLGMRALVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE-------------------------- 156
           G     G +RAGD   ++      G F    +D+                          
Sbjct: 142 GADAALGANRAGDVKAIENLALATGVFQLDVVDDHGPGETRVPANAKPVMPADHGEPADP 201

Query: 157 ----------LRNNKSQ-----IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                       + K Q     + SS+N+R  L +G + +A  +LG+   +E  V+HGE+
Sbjct: 202 LEGATKAERRAWSKKHQAKAVRVWSSTNVRYLLGQGRIKDADAILGHMHAVEGTVVHGEE 261

Query: 202 IGRTLGFPTANMQLSPDI---LLKEGVYAIRF----RTQDQTS--YSGVANFGRNPTM-- 250
            GRT+GFPTAN  LS D+   L  +GVYA       +  D+      G+A    + +M  
Sbjct: 262 RGRTIGFPTAN--LSQDVFGYLPVDGVYAGWLVDLGKAGDEAGKPADGIATAYDSSSMDA 319

Query: 251 --VPNGPL-----------------------LLESF-IFDFSQEIYGQRCTVSFFDYLRP 284
              P+ P                        ++E++ I D   ++YG +  V F  +LRP
Sbjct: 320 RLAPHSPYRWPAAISIGTKPTFNEATGMHERVVEAYAITDDWLDLYGHQVRVEFAGFLRP 379

Query: 285 EIKFKDIEKLKIYMGEDEKKARKI 308
           +I+F   + L   +  + ++ +++
Sbjct: 380 QIRFASADDLAAELRRNVEETKRL 403


>gi|167835734|ref|ZP_02462617.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 174

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 14/178 (7%)

Query: 7   IEINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTI 62
           +++ + LPN       A  IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 1   MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 60

Query: 63  IQSSSPIFTLSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +S     +PP I   ++K+  L + G   ++   F    A+ S E F+++ LV  L 
Sbjct: 61  FNPAS-----APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL 
Sbjct: 116 TRWIMVGDDFCYGAKRAGNFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALA 173


>gi|242310728|ref|ZP_04809883.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pullorum MIT 98-5489]
 gi|239523126|gb|EEQ62992.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pullorum MIT 98-5489]
          Length = 296

 Score = 85.5 bits (210), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 44/304 (14%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPPS 76
           +A+G FDG+H+ H  I +    + +N  +  +  N     P P        PI+ L+   
Sbjct: 20  IALGKFDGMHIAHQEIFKA---LDSNGMVLCIESNRGELLPKPYRDFYCEFPIYHLALDI 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I+EK                      S E F++ +      +K ++ G  FRFGKDR   
Sbjct: 77  IKEK----------------------SGEDFVRFICGILPNLKRIVVGYDFRFGKDRNCY 114

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              LQK  +GE      VF  +L       V S  I+  L  G++  A  LLG  F I  
Sbjct: 115 TFDLQKYFQGEVVVIEEVFCKKLS------VHSGLIKELLINGNLKEANKLLGRNFEIHG 168

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT----SYSGVANFGRNPTM 250
            +I G+ IG+   + T N++    IL +EGVYA   +   Q+     Y  V   G    +
Sbjct: 169 SIIKGQGIGKRELYATINIENDGFILPQEGVYAGYIQLGKQSHITPKYPAVIFVGNR--L 226

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +    +E  +     ++  +     F+  +R    F ++E LK+ + +D +KA KIL+
Sbjct: 227 STDKAFAIEGHLLGMEIKVKDKEAGFYFYRKIRENYYFDNLETLKMQIKQDIQKAYKILK 286

Query: 311 SSYP 314
              P
Sbjct: 287 IEIP 290


>gi|259416272|ref|ZP_05740192.1| FMN adenylyltransferase [Silicibacter sp. TrichCH4B]
 gi|259347711|gb|EEW59488.1| FMN adenylyltransferase [Silicibacter sp. TrichCH4B]
          Length = 130

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGV 241
           +LG+   IE +VI GE+ GR LGFPTAN  +        GVYA+     D   + SY G 
Sbjct: 1   MLGHWHRIEGEVIGGEQRGRELGFPTANQSIDGLHPPAFGVYAVLVDVLDGPHKGSYHGA 60

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  P    + P + E+++FDF   +YG   +V   DYLRPE+ F  +E     M  D
Sbjct: 61  ASVGVRPMFDGDQPNI-ETYLFDFKGNLYGAHLSVGLVDYLRPEMTFDGLEPFIAQMQAD 119

Query: 302 EKKARKILES 311
             +AR IL++
Sbjct: 120 CDQARAILKT 129


>gi|331703122|ref|YP_004399809.1| riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           capri LC str. 95010]
 gi|328801677|emb|CBW53830.1| Riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           capri LC str. 95010]
          Length = 250

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 4/150 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  ++  +NI+ AL    + +   + G+ +T    V H   +GRT+GFPTAN+  +  ++
Sbjct: 101 EDDLLDINNIKKALINADINSFYKIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLV 160

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
           +K GVY ++    D+    G+ +   N     N   + E++IF+FS +IY  + T    D
Sbjct: 161 IKNGVYLVKVIIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLD 216

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           Y+R   K   +++LK  +  D+K+  K LE
Sbjct: 217 YIRDNQKINSLDQLKTLLNNDKKECLKRLE 246


>gi|307720807|ref|YP_003891947.1| riboflavin biosynthesis protein RibF [Sulfurimonas autotrophica DSM
           16294]
 gi|306978900|gb|ADN08935.1| riboflavin biosynthesis protein RibF [Sulfurimonas autotrophica DSM
           16294]
          Length = 273

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 52/306 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K   ++IG FDG+H+GH  + +   K+ +   I V+             +    L+P   
Sbjct: 3   KTTTISIGGFDGMHIGHQALFD---KLDDKGTIVVIE------------TGYANLTPDRF 47

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+       +  I Y    +  +  A+ F+  + V++ ++K ++ G  F FGKDR    
Sbjct: 48  RERYT-----THRIVYLKLDDIRHLDAKGFVNLLKVKFPKLKKIVVGYDFHFGKDR---- 98

Query: 138 GILQKRGEKYGFHTVFIDELRN-------------NKSQIVSSSNIRTALTKGHVLNAAH 184
                   KY +     D+L+N             + +  V S  IR  L  G +  A  
Sbjct: 99  --------KYSY-----DDLKNIFKGEVVVVEEVKHNNDSVHSHKIRAKLQIGDIKGANE 145

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG+ + +    I G+ +G    F T N+ +   +L KEGVYA   R  D+  Y    +F
Sbjct: 146 FLGHNYMVVGKRIDGQGLGSKELFATINLDVKDFLLPKEGVYATLTRIDDEEHYHPSVSF 205

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                +  +G   +ES I D  +     +  +SF D++R   KF  I++LK  + +D  K
Sbjct: 206 -IGHRVSTDGTFAVESHILD-GELTCKDKAEISFVDFIRNNEKFDSIQELKEAIKKDIAK 263

Query: 305 ARKILE 310
           A K L+
Sbjct: 264 AGKELK 269


>gi|313681946|ref|YP_004059684.1| riboflavin biosynthesis protein ribf [Sulfuricurvum kujiense DSM
           16994]
 gi|313154806|gb|ADR33484.1| riboflavin biosynthesis protein RibF [Sulfuricurvum kujiense DSM
           16994]
          Length = 275

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 125/295 (42%), Gaps = 38/295 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-----SFNPHPRTIIQSSSPIFTLSPP 75
            +AIG FDG+H GH  +  +   +  N  I V+     +  P       +  PI   S  
Sbjct: 8   AIAIGGFDGMHAGHQKLFNE---LGKNGAIVVIETGYANLTPGREREHYTHYPILYYSLD 64

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I+   LE   F AL++ +F                      ++ ++ G  F FGK+R  
Sbjct: 65  DIRH--LEGEEFVALLKERFP--------------------HLRKIVVGYDFHFGKNRRY 102

Query: 136 DRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
               L   GE +      ID++   N S  V S  IR+ +  G +  A   LG+ + I+ 
Sbjct: 103 SHANL---GELFSGEVKVIDQVCIENDS--VHSHKIRSKIQIGDLSGANRFLGHNYAIKG 157

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            VI G+ IG+T   PT N++    +L  EGVYA   R   +  Y     F     +  +G
Sbjct: 158 TVIKGQGIGKTDLVPTINLECPGYLLPYEGVYAAFVRLDSEEHYHPCVVF-VGHRVTTDG 216

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E  + D       +R ++SF  +LR   KF+ +E LK  + +D   AR+ L
Sbjct: 217 SYAVECHVLD-ENIPSCERASISFVKFLRKNQKFESLESLKKAISDDILNARREL 270


>gi|256383947|gb|ACU78517.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384779|gb|ACU79348.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455257|gb|ADH21492.1| riboflavin kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 250

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  ++  +NI+ AL    +     + G+ +T    V H   +GRT+GFPTAN+  +  ++
Sbjct: 101 EDDLLDINNIKKALINADINTFYKIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLV 160

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
           +K GVY ++    D+    G+ +   N     N   + E++IF+FS +IY  + T    D
Sbjct: 161 IKNGVYLVKVIIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLD 216

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           Y+R   K   +++LK  +  D+K+  K LE
Sbjct: 217 YIRDNQKINSLDQLKTLLNNDKKECLKRLE 246


>gi|76664967|emb|CAJ17923.1| riboflavin kinase [Candidatus Phytoplasma solani]
          Length = 141

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           I+  L++G +  A   LG  + I+  VI G++ GR LGF TAN+  S   L   GVYA+ 
Sbjct: 3   IKNLLSQGKIKEANLSLGKPYLIQGKVILGQQRGRQLGFRTANLDCSNYFLPLLGVYAV- 61

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
             T  +  Y  +AN G  PT       LLE  +FDF +++YG+  TV F  +LR E KF 
Sbjct: 62  LVTYKRKKYRSIANLGVRPTFDSGNKKLLEVHLFDFEKDLYGKTITVEFVAFLRAEKKFA 121

Query: 290 DIEKL 294
           ++ +L
Sbjct: 122 NVSEL 126


>gi|268679993|ref|YP_003304424.1| riboflavin biosynthesis protein RibF [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618024|gb|ACZ12389.1| riboflavin biosynthesis protein RibF [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 293

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 37/296 (12%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDGIH+GH  +++   ++ ++  + V+  +    T             P I+   
Sbjct: 16  LAIGSFDGIHVGHRQLIK---RLGHHGALCVIDKDEANLT-------------PGIKRS- 58

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E  G   +  +   L+  + S  +FI  +  E++ +K ++ G  F FGK RA +   LQ
Sbjct: 59  -EYAGCPCMFLH--FLKVKHLSGAEFIALLQKEFVNLKKIVVGYDFFFGKHRACNAYDLQ 115

Query: 142 K--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           K   GE      V + E    +   + SS IRT L +G +  A   LG  ++I   ++ G
Sbjct: 116 KLFDGE------VEVVEEFTYQGISIHSSLIRTYLIEGRIEEANRFLGREYSITGSIVSG 169

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG-RNPTMVPNGPLLL 258
           + IG+    PT N+++S  ++  EGVYA R R   Q  Y  V+  G R+ T   +G   +
Sbjct: 170 QGIGKKELVPTLNLKISDYLIPHEGVYATRSRI-GQNVYDSVSFIGTRHST---DGMFSV 225

Query: 259 ESFIFDFSQEIYGQRCTVSFF--DYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           E+ I    ++I      V  F   +LR   KF  +  LK  +  D K A+K L+S 
Sbjct: 226 ETHI--IGEDILEVTTPVELFFVAFLRENQKFNALSDLKKQIECDIKSAQKFLKSC 279


>gi|224436534|ref|ZP_03657543.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter cinaedi CCUG 18818]
 gi|313143037|ref|ZP_07805230.1| riboflavin kinase/FAD synthase RibF [Helicobacter cinaedi CCUG
           18818]
 gi|313128068|gb|EFR45685.1| riboflavin kinase/FAD synthase RibF [Helicobacter cinaedi CCUG
           18818]
          Length = 288

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 33/305 (10%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           S+P   +   + +G FDG+HL H  + +    +  +  +            I+S   + T
Sbjct: 6   SMPEDRRITHLVLGKFDGMHLAHKELFKH---LGESGAVLC----------IESGGELLT 52

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L      +K +  + FS         +   ++   F++K+  ++  ++ ++ G  F FGK
Sbjct: 53  LDKELYCDKEMIFVEFS---------DIKEWNGAYFVKKLKEKFRALEKLVVGYDFCFGK 103

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +RA +    +   + +G   + + E    K Q+V SS I+ A+ +G + NA  LLG  + 
Sbjct: 104 NRAWNA---EDLADLFGGEVIIVPEF-CIKDQVVHSSVIKQAIKQGDMKNAKALLGRYYH 159

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I+  V+ G+ +G T  + T N++ S  +L + GVYA   + Q++  Y  V   G    + 
Sbjct: 160 IQGRVVKGQNLGSTQLYATINIETSRYVLPQNGVYASFTKLQNRI-YKSVCFVGHR--LS 216

Query: 252 PNGPLLLESFIF--DFSQE--IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +G   +E+ I   DF  E  I      V F + +R    F D+ +LK  + +D  +A  
Sbjct: 217 TDGAFSIETHIIDKDFVAEDRISVDSVNVCFIEKIRDNRTFSDLGELKSRIAKDISQAHY 276

Query: 308 ILESS 312
           IL+S+
Sbjct: 277 ILDSA 281


>gi|149006213|ref|ZP_01829925.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae SP18-BS74]
 gi|147761990|gb|EDK68952.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae SP18-BS74]
          Length = 175

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KE 223
           +SS+ IR A+  G+V  A  LLG        V+HG   GRT+G+PTAN+ L     +  +
Sbjct: 32  ISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPAD 91

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           GVY +    Q Q  Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R
Sbjct: 92  GVYVVDVEIQRQ-KYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIR 149

Query: 284 PEIKFKDIEKLKIYMGEDEKKAR 306
              KF  +++L   +  DE+  R
Sbjct: 150 DMTKFDSVDQLVDQLKADEEVTR 172


>gi|42560665|ref|NP_975116.1| riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|42492161|emb|CAE76758.1| Riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|301321051|gb|ADK69694.1| putative riboflavin biosynthesis protein RibF [Mycoplasma mycoides
           subsp. mycoides SC str. Gladysdale]
          Length = 250

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA 227
           +N + AL    + +  ++ G+ +T    V H   +GRT+ FPTAN+  +  +++K GVY 
Sbjct: 108 NNAKQALINADINSFYNIAGFNYTFSGIVTHCNHLGRTINFPTANILTNDSLVIKNGVYL 167

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           ++    D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K
Sbjct: 168 VKVIIDDKNIQFGMGDHWIN----KNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQK 223

Query: 288 FKDIEKLKIYMGEDEKKARKILE 310
              +E+LK  +  D+K+  K LE
Sbjct: 224 INSLEQLKTLLNNDKKECLKRLE 246


>gi|213613334|ref|ZP_03371160.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 165

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 6/135 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P  +  +      L+   
Sbjct: 16  GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLT--R 73

Query: 77  IQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++EK+  L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 74  LREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 133

Query: 135 GDRGILQKRGEKYGF 149
           GD  +LQK G +YGF
Sbjct: 134 GDFLLLQKAGAEYGF 148


>gi|78777539|ref|YP_393854.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sulfurimonas denitrificans DSM 1251]
 gi|78498079|gb|ABB44619.1| Riboflavin kinase / FAD synthetase [Sulfurimonas denitrificans DSM
           1251]
          Length = 276

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 48/301 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +AIG FDG+H+GH    +Q  +  +              TI+   +    L+P      
Sbjct: 9   AIAIGGFDGMHIGH----QQLFRALDEKS-----------TIVVIETGYANLTPKR---- 49

Query: 81  ILEKMGFSAL-IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             E+  FS   + Y    E  + + E+FI  +  ++ +++ ++ G  F FGKDR      
Sbjct: 50  --ERESFSHYPLLYLELNEIRHLNGEEFIAFLKDKFPKLQKIVVGYDFHFGKDR------ 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI----------VSSSNIRTALTKGHVLNAAHLLGYR 189
                 KY F+   + EL +N+  +          V S  IR  L  G ++ A   LG+ 
Sbjct: 102 ------KYSFNN--LKELFDNEVVVVNEVTLHGDSVHSHKIRAKLQIGDIVGANAFLGHN 153

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +TI+  ++ G+ IG+     T N++    ++ KEGVY    R  D+  +    +F     
Sbjct: 154 YTIKGTLVSGQGIGKKELVATINLEAKEYLMPKEGVYVTLTRIDDEEHFHPSVSF-VGHR 212

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  +G   LES I D  + I  +R T+SF  ++R   KF  +++LK  + +D   A K L
Sbjct: 213 ITTDGSFALESHILD-GEVICKERATISFVSFIRENRKFDSLDELKKAIHKDIATASKEL 271

Query: 310 E 310
           +
Sbjct: 272 K 272


>gi|313664990|ref|YP_004046861.1| riboflavin kinase / FAD synthetase [Mycoplasma leachii PG50]
 gi|312950010|gb|ADR24606.1| riboflavin kinase / FAD synthetase [Mycoplasma leachii PG50]
          Length = 250

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA 227
           +N + AL    + +  ++ G+ +T    V H   +GRT+ FPTAN+  +  +++K GVY 
Sbjct: 108 NNAKQALINADINSFYNIAGFNYTFSGIVTHCNHLGRTINFPTANILTNDSLVIKNGVYL 167

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           ++    D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K
Sbjct: 168 VKVIIDDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQK 223

Query: 288 FKDIEKLKIYMGEDEKKARKILE 310
              +E+LK  +  D+K+  K LE
Sbjct: 224 INSLEQLKTLLNNDKKECLKRLE 246


>gi|168039944|ref|XP_001772456.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676253|gb|EDQ62738.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 266

 Score = 82.8 bits (203), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 21/216 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           + GGVVA+G F+G+HLGH  ++E+A +I    PI +LS +     +     P   +    
Sbjct: 1   VAGGVVALGKFEGLHLGHRALVERASEIGK--PI-MLSLSGMAEVL--GWEPKLPVVAAD 55

Query: 77  IQEKILEKMGFSA--LIRYKFTLETA---NYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            + ++LE  G     ++  +  LE A     S EQF++K L + L+VK  + G  +RFG 
Sbjct: 56  DRARVLESWGKHCHDMVPQEHVLEFAKIRKLSPEQFVEK-LAKELKVKGAVAGADYRFGF 114

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----------VSSSNIRTALTKGHVLN 181
             AG    L +  EKYG  +  ++ + ++K             VS++ IR AL +G++  
Sbjct: 115 RAAGKASDLVELCEKYGLQSAIVEPIMDSKDTPLDGTAKDKGQVSTTRIRNALAEGNMKR 174

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP 217
              LLG +  +  D+      G+T+  P  N+   P
Sbjct: 175 VTELLGRQHRLYLDLKDCVPSGKTITLPIGNVLNQP 210


>gi|291515855|emb|CBK65065.1| FAD synthase [Alistipes shahii WAL 8301]
          Length = 490

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           R  IE  V HG ++GR LGFPTAN+ +  D+   +GVY  R     +  Y  ++N GRNP
Sbjct: 372 RILIEGVVEHGRRLGRELGFPTANLAVPEDVAAADGVYRSRAEVGGKV-YDAMSNLGRNP 430

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           + V      LE+ IFDF  E+YG+R  V   + +R E +F  +E+L+  +  D++
Sbjct: 431 S-VGGVERRLETHIFDFRGELYGRRLRVELLEKIRDERRFASVEELRGQIARDKE 484


>gi|238020505|ref|ZP_04600931.1| hypothetical protein GCWU000324_00387 [Kingella oralis ATCC 51147]
 gi|237867485|gb|EEP68491.1| hypothetical protein GCWU000324_00387 [Kingella oralis ATCC 51147]
          Length = 122

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG+K+GRT+G PTAN+ L        GV+ +R +       +GVA+FG NPT+       
Sbjct: 3   HGKKLGRTIGCPTANVHLPLHCYSLSGVFVVRAKGSFGEC-AGVASFGTNPTVSHTPEAK 61

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LE  +FDFS  +YG+R  V+F   LR E KF  I  L+  + +D + AR   ++
Sbjct: 62  LEVHLFDFSGCLYGERIQVTFLHKLRDEAKFDSIADLQAQIAQDIETARAWYQA 115


>gi|311114230|ref|YP_003985451.1| riboflavin kinase/FMN adenylyltransferase [Gardnerella vaginalis
           ATCC 14019]
 gi|310945724|gb|ADP38428.1| riboflavin kinase/FMN adenylyltransferase [Gardnerella vaginalis
           ATCC 14019]
          Length = 446

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 59/280 (21%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII 63
           N  IN    +  +  +V IG FDG+HLGH  ++E+ + +A  NN+   V+ F+P P  + 
Sbjct: 12  NGMINWPTLSAQRKAIVTIGVFDGMHLGHRKVIERTVDLARKNNAFSVVIMFDPRPSVVH 71

Query: 64  QSSS-----------PIFTLSPPSIQE--KILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++             P+ + +  S+++  ++L+++    +I  +++L  A  S   F+ +
Sbjct: 72  ENPDLFDDFGDNAQIPVDSQALTSVRQRLRVLQQLDVDHVIIVRYSLAFAAKSYRFFLGQ 131

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE------------- 156
            LV  L ++ ++ G+    G  RAG+   +++  +  G F  V +D+             
Sbjct: 132 -LVGKLGMRALVLGSDAALGARRAGNVHAIKELAQATGVFDLVVVDDFGPGDVRVPDPIV 190

Query: 157 ----------------------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
                                       + N K +  SS+N+R  L  G V +A  +LG 
Sbjct: 191 PEVPSEDGEPKDPADGMNKAEYRAWSKGMPNKKVRAWSSTNVRWMLANGRVRDARDVLGQ 250

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYA 227
              +E  V+HG + GR +GFPT N+    D  +  +GVYA
Sbjct: 251 PHRVEGIVVHGAERGREIGFPTVNLGERIDGYVPVDGVYA 290



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 241 VANFGRNPTMVPNGP--LLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +++FG + +  PN     ++E++   D  Q++YG R  + F  +LRP+  F  +E LK  
Sbjct: 370 ISDFGADSSTYPNDSENRVVEAYALTDKWQDLYGHRICIEFAQFLRPQHAFDSVETLKDA 429

Query: 298 MGEDEKKARKILES 311
           +  D +K R+I ++
Sbjct: 430 VRHDVEKVREITDA 443


>gi|289808237|ref|ZP_06538866.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 103

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%)

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L V+ +  G  FRFG  RAGD  +LQK G +YGF             +I SS+ +R AL 
Sbjct: 2   LGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCEGGVRI-SSTAVRQALA 60

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
           + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L
Sbjct: 61  EDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPL 100


>gi|308234861|ref|ZP_07665598.1| riboflavin kinase [Gardnerella vaginalis ATCC 14018]
          Length = 445

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 59/280 (21%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII 63
           N  IN    +  +  +V IG FDG+HLGH  ++E+ + +A  NN+   V+ F+P P  + 
Sbjct: 11  NGMINWPTLSAQRKAIVTIGVFDGMHLGHRKVIERTVDLARKNNAFSVVIMFDPRPSVVH 70

Query: 64  QSSS-----------PIFTLSPPSIQE--KILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++             P+ + +  S+++  ++L+++    +I  +++L  A  S   F+ +
Sbjct: 71  ENPDLFDDFGDNAQIPVDSQALTSVRQRLRVLQQLDVDHVIIVRYSLAFAAKSYRFFLGQ 130

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE------------- 156
            LV  L ++ ++ G+    G  RAG+   +++  +  G F  V +D+             
Sbjct: 131 -LVGKLGMRALVLGSDAALGARRAGNVHAIKELAQATGVFDLVVVDDFGPGDVRVPDPIV 189

Query: 157 ----------------------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
                                       + N K +  SS+N+R  L  G V +A  +LG 
Sbjct: 190 PEVPSEDGEPKDPADGMNKAEYRAWSKGMPNKKVRAWSSTNVRWMLANGRVRDARDVLGQ 249

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYA 227
              +E  V+HG + GR +GFPT N+    D  +  +GVYA
Sbjct: 250 PHRVEGIVVHGAERGREIGFPTVNLGERIDGYVPVDGVYA 289



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 241 VANFGRNPTMVPNGP--LLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +++FG + +  PN     ++E++   D  Q++YG R  + F  +LRP+  F  +E LK  
Sbjct: 369 ISDFGADSSTYPNDSENRVVEAYALTDKWQDLYGHRICIEFAQFLRPQHAFDSVETLKDA 428

Query: 298 MGEDEKKARKILES 311
           +  D +K R+I ++
Sbjct: 429 VRHDVEKVREITDA 442


>gi|83320034|ref|YP_424057.1| riboflavin kinase / FAD synthetase family protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283920|gb|ABC01852.1| riboflavin kinase / FAD synthetase family protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 250

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 4/143 (2%)

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA 227
           +N + +L    + +  ++ G+ +T    V H   +GRT+GFPTAN+  +  +++K GVY 
Sbjct: 108 NNAKQSLVNADINSFYNIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLVIKNGVYL 167

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           ++    D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K
Sbjct: 168 VKVIIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQK 223

Query: 288 FKDIEKLKIYMGEDEKKARKILE 310
              +++LK  +  D+K+  K +E
Sbjct: 224 INSLDQLKTLLNNDKKECLKRME 246


>gi|50365150|ref|YP_053575.1| riboflavin kinase [Mesoplasma florum L1]
 gi|50363706|gb|AAT75691.1| riboflavin kinase [Mesoplasma florum L1]
          Length = 274

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 5/135 (3%)

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT- 232
           L  G +    +L G+ F  +  V HG  IGRT+ +PTAN+ ++ +++LKE VY    +  
Sbjct: 139 LKLGKIQEYKNLNGFNFGFKGFVEHGNHIGRTINYPTANIIINDELILKEAVYLTTTKLP 198

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D+ +Y  ++ +  N     NG  + ES I DF Q+IYG    V   D++R  IK  +++
Sbjct: 199 NDEKAYPSISAYWTN----KNGVNVFESHILDFDQDIYGWGIDVEIIDFIRESIKVNNLD 254

Query: 293 KLKIYMGEDEKKARK 307
           +LK  + +D+  A K
Sbjct: 255 ELKDLLNQDKAYAIK 269


>gi|283956001|ref|ZP_06373490.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|283792477|gb|EFC31257.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 1336]
          Length = 284

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDGIHLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 16  LAIGCFDGIHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 70

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA     ++
Sbjct: 71  FESI--------------KSLDGKDFLSFLKKEFINLKFIVVGYDFSFGKNRAYSAKDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 117 SLS---GIKTIIVDEFSIGGVG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKLIKGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q       S+ GV +   N  +  +   +
Sbjct: 173 LGSKELFATINLDCKGYFLPQNGVYATLLKSQKNIYKSVSFLGVRSSDENFAIESH---I 229

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE    +F+QE + +   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 230 LEELGENFTQEEFFE---LEFISFLRENQKFQDLKKLKNQIAKDIEQARELL 278


>gi|291513944|emb|CBK63154.1| FAD synthase [Alistipes shahii WAL 8301]
          Length = 187

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 11/195 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VFH  +   +LP+ ++   V +G++DG+HLGH  ++ + I    AN     VL+F PH
Sbjct: 1   MRVFHGFD---ALPHFVRP-AVTVGSYDGVHLGHRALIGRLIAEARANGGESIVLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  +  +  +  L+    +  +LE++G   +I   F    +  S E+F    L+  +  
Sbjct: 57  PRITLGKAEGLRLLTTLDEKTALLEELGVDNVIVIPFDRAFSALSGEEFADDYLIGKVGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG DR  D   L   G       V +   R +    VSS+ IR  L +G 
Sbjct: 117 ETLVAGYNHRFGHDRI-DCDTLAASGR---LRVVKVGPCRVDGEH-VSSTVIRRLLDEGK 171

Query: 179 VLNAAHLLGYRFTIE 193
              A  LLGY    E
Sbjct: 172 TAEAELLLGYSLQTE 186


>gi|296273829|ref|YP_003656460.1| riboflavin biosynthesis protein RibF [Arcobacter nitrofigilis DSM
           7299]
 gi|296098003|gb|ADG93953.1| riboflavin biosynthesis protein RibF [Arcobacter nitrofigilis DSM
           7299]
          Length = 275

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 27/274 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+H+ H  +      + +N  I  +    H             ++P   +EK 
Sbjct: 11  IAIGGFDGMHIAHQSLFNN---LTSNGAIIAIE-TGHA-----------NMTPKEQREKC 55

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
                 +  I Y    +  N S ++FI+ +  E+ ++K ++ G  F FGK+RA     L+
Sbjct: 56  T-----TFPIFYYELNDIKNLSGKEFIKLLKSEFPKLKKIVVGFDFCFGKNRANSTEELK 110

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                +    V ++E+  N   I  S  IR  +  G    A  LLG ++ I+   I G+ 
Sbjct: 111 SL---FDGEVVVVNEISINDIAI-HSRIIREYIKNGDFETANTLLGRKYEIKGTQIKGQG 166

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G++   PT N+ +   +L  EGVY  + +  D  SY  ++  G   T   +G   +E+ 
Sbjct: 167 LGKSDFVPTINLDIKEYLLPNEGVYITKTKV-DNVSYPSISFLGHRVT--TDGNFAVETH 223

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           I +     +    ++ FF  LR   KF   EKLK
Sbjct: 224 ILNKDISAHNSNISIKFFKKLRDNQKFDSFEKLK 257


>gi|167005242|ref|ZP_02271000.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 283

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 15  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 69

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA D   ++
Sbjct: 70  FENI--------------KSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYDAKDIE 115

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 116 SLS---GIKTIIVDEFSIGGVG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 171

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N  +  +   +
Sbjct: 172 LGSKELFATINLDCEGYFLPQNGVYATLLKSQRKIYKSVSFLGIRSSDENFAIESH---I 228

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE     F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 229 LEELGEKFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELL 277


>gi|121613196|ref|YP_001000290.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87250259|gb|EAQ73217.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 284

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 16  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 70

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA D   ++
Sbjct: 71  FENI--------------KSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYDAKDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 117 SLS---GIKTIIVDEFSIGGVG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N  +  +   +
Sbjct: 173 LGSKELFATINLDCEGYFLPQNGVYATLLKSQRKIYKSVSFLGIRSSDENFAIESH---I 229

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE     F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 230 LEELGEKFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELL 278


>gi|305431681|ref|ZP_07400850.1| riboflavin biosynthesis protein RibF [Campylobacter coli JV20]
 gi|304445276|gb|EFM37920.1| riboflavin biosynthesis protein RibF [Campylobacter coli JV20]
          Length = 278

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 35/302 (11%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           +L N++K   +AIG FDG+HLGH  ++E      ++S   ++      + +  +    F 
Sbjct: 7   TLKNNIK--TLAIGCFDGVHLGHRKLIE----CLDDSGALLIIDKFKGKKLCTNQDKAF- 59

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+   I E   E +   AL              + F+Q +  E++ ++ ++ G  F FGK
Sbjct: 60  LAQKEIIELDFENI--KAL------------DGKDFLQALKEEFVNLERIVVGFDFSFGK 105

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R+     ++      G  T  IDE + +    V +S I+  LT+G +  A   LG  + 
Sbjct: 106 NRSYKAKDIEALS---GIKTTIIDEFKLDGVG-VHASLIKEYLTQGDIKKANSFLGRNYA 161

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG-RNPTM 250
           I+  +I G+ +G    F T N++     L K GVYA      D+  Y  V+  G R+  M
Sbjct: 162 IKGKLIKGQGLGSKELFATLNLECEEYFLPKNGVYASIVSFHDK-RYKSVSFVGVRSSDM 220

Query: 251 VPNGPLLLESFI---FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
                  +ES I   FD S  I G+   + F ++LR   KF D+ +LK  + +D  +A++
Sbjct: 221 ----QFAIESHIIEKFDESLAI-GEVLELEFVEFLRENQKFNDLAQLKEQISKDINQAKE 275

Query: 308 IL 309
            L
Sbjct: 276 CL 277


>gi|57168172|ref|ZP_00367311.1| riboflavin biosynthesis protein RibF [Campylobacter coli RM2228]
 gi|57020546|gb|EAL57215.1| riboflavin biosynthesis protein RibF [Campylobacter coli RM2228]
          Length = 290

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 41/305 (13%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           +L N++K   +AIG FDG+HLGH  ++E      ++S   ++      + +  +    F 
Sbjct: 19  TLKNNIK--TLAIGCFDGVHLGHRKLIE----CLDDSGALLIIDKFKGKKLCTNQDKAFL 72

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSA---EQFIQKVLVEWLEVKTVITGTKFR 128
                 Q++I+E             L+  N  A   + F+Q +  E++ ++ ++ G  F 
Sbjct: 73  -----AQKEIIE-------------LDFENIKALDGKDFLQALKEEFVNLERIVVGFDFS 114

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R+     ++      G  T  IDE + +    V +S I+  LT+G +  A   LG 
Sbjct: 115 FGKNRSYKAKDIEALS---GIKTTIIDEFKLDGVG-VHASLIKEYLTQGDIKKANSFLGR 170

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG-RN 247
            + I+  +I G+ +G    F T N++     L K GVYA      D+  Y  V+  G R+
Sbjct: 171 NYAIKGKLIKGQGLGSKELFATLNLECEEYFLPKNGVYASIVSFHDK-RYKSVSFVGVRS 229

Query: 248 PTMVPNGPLLLESFI---FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             M       +ES I   FD S  I G+   + F ++LR   KF D+ +LK  + +D  +
Sbjct: 230 SDM----QFAIESHIIEKFDESLAI-GEVLELEFVEFLRENQKFNDLAQLKEQISKDINQ 284

Query: 305 ARKIL 309
           A++ L
Sbjct: 285 AKECL 289


>gi|283954131|ref|ZP_06371656.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794410|gb|EFC33154.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 284

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 33/295 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH     + IK  + + + +L  N      + S+     +S   + E  
Sbjct: 16  LAIGCFDGMHLGHL----KLIKCLDENGV-LLVINKFKGQFLCSNHQKEEISGKKVIEVD 70

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA +   ++
Sbjct: 71  FESI--------------KSLDGKDFLNFLKKEFINLKFIVVGYDFSFGKNRAYNAKDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE     +  V +S I+  L K ++  A   LG  ++I+  V+ G+ 
Sbjct: 117 PLS---GIKTIIVDEFSIGGTG-VHASLIKNFLVKANLQKAKEFLGRNYSIKGKVVKGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N ++  +   +
Sbjct: 173 LGSKELFATINLDCEGYFLPQNGVYATLLKSQRKICKSVSFLGIRSSDENFSIESH---I 229

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LE    +F QE + +   + F  +LR   KF+D++KLK  + +D K+A+ +L  S
Sbjct: 230 LEKLDENFMQEEFLE---LEFIAFLRENQKFQDLKKLKSKIVKDIKQAQNLLRKS 281


>gi|153951303|ref|YP_001398172.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938749|gb|ABS43490.1| putative riboflavin biosynthesis protein RibF [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 284

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 141/297 (47%), Gaps = 43/297 (14%)

Query: 22  VAIGNFDGIHLGHHLILE-----QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +A+G FDG+HLGH  +++      A+ + N      L  N     I  S   +  L   S
Sbjct: 16  LAMGCFDGMHLGHLKLVKCLDENGALLVINKFKGQFLCSNRQKEEI--SGKKVIELDFES 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I+                 +L+  ++ +  F++K   E++ +K ++ G  F FGK+RA  
Sbjct: 74  IK-----------------SLDGKDFLS--FLKK---EFVNLKFIVVGYDFSFGKNRAYS 111

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++      G  T+ +DE        V +S I+  L+K ++ NA   LG  ++I+  +
Sbjct: 112 AKDIESLS---GIKTIIVDEFSIGGIG-VHASLIKDFLSKANLQNAKEFLGRNYSIKGKL 167

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVP 252
           I+G+ +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N  +  
Sbjct: 168 INGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQRKIYKSVSFLGIRSSDENFAIES 227

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   +LE    +F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 228 H---ILEELGENFTQ---GEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELL 278


>gi|313157023|gb|EFR56455.1| riboflavin kinase [Alistipes sp. HGB5]
          Length = 245

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 13/196 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VFH  E   +LP H     V +G++DG+H GH  +L      A        V +F PH
Sbjct: 1   MRVFHGFE---ALP-HFTHPAVTVGSYDGVHSGHLKLLRTVTAAARGQGGESIVFTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR  +  +  +  L+  ++ EKI  LE++G   L+   F    +  + ++F++  LV   
Sbjct: 57  PRITLGKADGLRLLT--TLDEKICLLERLGIDNLVIIPFDRAFSRLAPDEFVRDCLVGHT 114

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +T++ G   RFG D+ G    L   G  +G   + + E  +  ++ VSS+ IR  + +
Sbjct: 115 GAETLVVGFNHRFGHDKQGSYDYLDSHG--FGLRVIEVSEC-DVDAEKVSSTVIRQLVGE 171

Query: 177 GHVLNAAHLLGYRFTI 192
           G +  AA LL + + +
Sbjct: 172 GKMARAARLLAHPYLV 187


>gi|283782789|ref|YP_003373543.1| riboflavin kinase [Gardnerella vaginalis 409-05]
 gi|297242934|ref|ZP_06926872.1| FAD synthase [Gardnerella vaginalis AMD]
 gi|283442117|gb|ADB14583.1| riboflavin kinase [Gardnerella vaginalis 409-05]
 gi|296889145|gb|EFH27879.1| FAD synthase [Gardnerella vaginalis AMD]
          Length = 414

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/398 (21%), Positives = 158/398 (39%), Gaps = 96/398 (24%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI---- 62
           IN    +  +  VV IG FDG+H GH  ++ + + +A+       V+ F+P P  +    
Sbjct: 14  INWPTLSAERKAVVTIGVFDGMHKGHREVIRRTVDLAHRHGAFSVVIMFDPRPSVVHANP 73

Query: 63  --------IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
                   + S  P    +  S++++  ++ ++    ++  +++L  A  S   F+ + L
Sbjct: 74  DLYDDFGDVNSKLPDDPDALTSVRQRLRVMSQLDVDHVVIVRYSLAFAAKSYRFFLGQ-L 132

Query: 113 VEWLEVKTVITGTKFRFGKDRAGD----RGILQKRG-------EKYGFHTVFIDE----- 156
           V  L ++ ++ G+    G  RAGD    R + Q  G       E  G   V + +     
Sbjct: 133 VGKLGMRALVLGSDAALGARRAGDIKAIRELSQATGVFELIEVEDLGPDDVRVPDPIVRE 192

Query: 157 --------------------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                                     + N K +  SS+N+R  L  G V  A  +L    
Sbjct: 193 VPQEPGDPKDPSEGMNKAEYRAWSKSMPNKKVRAWSSTNVRWMLATGRVKEAREILDQPH 252

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYA---------------------- 227
            +E  V+HG++ GR +GFPT N+    +  +  +GVYA                      
Sbjct: 253 RVEGTVVHGDERGREIGFPTVNLGEKIEGYVPVDGVYAGWVVDLDADNKNDVRPSKNAVP 312

Query: 228 ---------IRFRTQDQTSYSGVANFGRNPTMVPNG----PLLLESF-IFDFSQEIYGQR 273
                    +         +    + G  PT   +G       +E++ +FD  +++YG R
Sbjct: 313 DVSVLRRDELHLGVHSPWRWPAAISIGTKPTFNKDGEEDAERTVEAYGLFDDWKDLYGHR 372

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + F  +LRP+  F  ++ LK  +  + ++ R+I ++
Sbjct: 373 VCIEFASFLRPQQAFDSVDALKDMLKANVEQVREITDA 410


>gi|183601978|ref|ZP_02963347.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682890|ref|YP_002469273.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190467|ref|YP_002967861.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195873|ref|YP_002969428.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218863|gb|EDT89505.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620540|gb|ACL28697.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248859|gb|ACS45799.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250427|gb|ACS47366.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178191|gb|ADC85437.1| Riboflavin kinase [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793454|gb|ADG32989.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis V9]
          Length = 428

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 156/407 (38%), Gaps = 119/407 (29%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP-------RTIIQSSSP 68
           K  VV +G FDG+H+GHH ++E+ ++ A   ++   V+ F+P P       +       P
Sbjct: 23  KKSVVTVGAFDGLHVGHHAVIEETVRQARKLDAYSVVIMFDPRPAFVHAYAKAHAGKDVP 82

Query: 69  IFTLSPPSI-----QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                P +I     + ++L +M    ++  ++T+  +  S   F+ + LV  L ++ ++ 
Sbjct: 83  AGVHDPEAITGVDARLRMLSRMHVDYVLIVRYTIAFSEKSFRFFLGQ-LVGKLGMRMLVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV------------------ 165
           G   R G +  GD   ++   E  G   VF  E+  N+   V                  
Sbjct: 142 GEDARMGANLEGDIKKIRTLAEATG---VFELEVVTNQGGTVRVPERFTPTAPNEPGEPG 198

Query: 166 --------------------------SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
                                     SS+N+R  L++G V  A  +LG+   +E  V HG
Sbjct: 199 DPLEGLGKAERRAWSKKHNAREVRNQSSTNVRYLLSQGRVQAANEILGHAHAVEGVVEHG 258

Query: 200 EKIGRTLGFPTANM--------------------------------QLSPDILLKEGVYA 227
           E+ GRT+GFPTAN+                                QLS      E V A
Sbjct: 259 EERGRTIGFPTANIAEPMEGYLPVDGVYAGWLVDLGPADEYERDQQQLSGKAADGEAVEA 318

Query: 228 I---------------------RFRTQDQTSYSGVANFGRNPTMVPNGPL---LLESFIF 263
                                 R   Q    +    + G  PT   +  L   +LE++  
Sbjct: 319 ASVTVSDTPVVSHRFSSSRVDSRLAAQSPFRWPAAISIGTKPTYSESTGLNERVLEAYAL 378

Query: 264 -DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            D   ++YG R  V F  +LRP+IKF   ++L   +  + ++ +++L
Sbjct: 379 TDEWLDLYGHRVRVEFERFLRPQIKFGSTDELVAELKHNVEETKELL 425


>gi|298253043|ref|ZP_06976835.1| FAD synthase [Gardnerella vaginalis 5-1]
 gi|297532438|gb|EFH71324.1| FAD synthase [Gardnerella vaginalis 5-1]
          Length = 402

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/398 (20%), Positives = 159/398 (39%), Gaps = 96/398 (24%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI---- 62
           IN    +  +  VV IG FDG+H GH  ++ + + +A+       V+ F+P P  +    
Sbjct: 2   INWPTLSAERKAVVTIGVFDGMHKGHREVIRRTVDLAHRHGAFSVVIMFDPRPSVVHANP 61

Query: 63  --------IQSSSPIFTLSPPSIQEK--ILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
                   + S  P    +  S++++  ++ ++    ++  +++L  A  S   F+ + L
Sbjct: 62  DLYDDFGDVNSKLPDDPDALTSVRQRLRVMSQLDVDHVVIVRYSLAFAAKSYRFFLGQ-L 120

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL-------------- 157
           V  L ++ ++ G+    G  RAGD   +++  +  G F  + +++L              
Sbjct: 121 VGKLGMRALVLGSDAALGARRAGDIKAIRELSQATGVFELIEVEDLGPDDVRVPDPIVRE 180

Query: 158 ---------------------------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                                       N K +  SS+N+R  L  G V  A  +L    
Sbjct: 181 VPQEPGDPKDPSDGMNKAEYRAWSKSMPNKKVRAWSSTNVRWMLATGRVKEAREILDQPH 240

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYA---------------------- 227
            +E  V+HG++ GR +GFPT N+    +  +  +GVYA                      
Sbjct: 241 RVEGTVVHGDERGREIGFPTVNLGEKIEGYVPVDGVYAGWVVDLDADNKNDVRPSKNAVP 300

Query: 228 ---------IRFRTQDQTSYSGVANFGRNPTMVPNG----PLLLESF-IFDFSQEIYGQR 273
                    +         +    + G  PT   +G       +E++ +FD  +++YG R
Sbjct: 301 DVSVLRRDELHLGVHSPWRWPAAISIGTKPTFNKDGEEDAERTVEAYGLFDDWKDLYGHR 360

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + F  +LRP+  F  ++ LK  +  + ++ R+I ++
Sbjct: 361 VCIEFASFLRPQQTFDSVDALKDMLKANVEQVREITDA 398


>gi|86149853|ref|ZP_01068082.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596869|ref|ZP_01100105.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218562240|ref|YP_002344019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|85839671|gb|EAQ56931.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88190558|gb|EAQ94531.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359946|emb|CAL34735.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925850|gb|ADC28202.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315930611|gb|EFV09641.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 284

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 16  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 70

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +          +L+  ++ +  F++K   E++ +K ++ G  F FGK+RA +   ++
Sbjct: 71  FESIK---------SLDGRDFLS--FLKK---EFVNLKFIVVGYDFSFGKNRAYNAKDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE   +    V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 117 SLS---GIKTIIVDEFSIDGIG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT----SYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVY    ++Q +T    S+ GV +   N  +  +   +
Sbjct: 173 LGSKELFATINLDCEGYFLPQNGVYVTLLKSQRKTYKSVSFLGVRSSDENFAIESH---I 229

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE    +F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 230 LEELGENFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELL 278


>gi|315927326|gb|EFV06670.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 283

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 15  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 69

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +     F+  +  E++ +K ++ G  F FGK+RA +   ++
Sbjct: 70  FESI--------------KSLDGRDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYNAKDIE 115

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE   +    V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 116 SLS---GIKTIIVDEFSIDGIG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 171

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT----SYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVY    ++Q +T    S+ GV +   N  +  +   +
Sbjct: 172 LGSKELFATINLDCEGYFLPQNGVYVTLLKSQRKTYKSVSFLGVRSSDENFAIESH---I 228

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE    +F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 229 LEELGENFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELL 277


>gi|229172787|ref|ZP_04300342.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
 gi|228610675|gb|EEK67942.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
          Length = 182

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 13/182 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIPE-LTKSIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQ- 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L    +  G  FR
Sbjct: 67  --VLTPIDEKVKRIQNLGVEHVIVIQFDESYLTKSASCFIQD--IKRLSPVEIFIGQDFR 122

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G +  ++ LLG+
Sbjct: 123 FGKNREGNIELLREH-----FNISIVKDVCCDEGERISSTRIRDYVYHGDLQKSSSLLGW 177

Query: 189 RF 190
            F
Sbjct: 178 SF 179


>gi|254459016|ref|ZP_05072439.1| riboflavin kinase [Campylobacterales bacterium GD 1]
 gi|207084287|gb|EDZ61576.1| riboflavin kinase [Campylobacterales bacterium GD 1]
          Length = 273

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 46/291 (15%)

Query: 21  VVAIGNFDGIHLGH-HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            +AIG FDG+H+GH HL  E                  H  TI+   +    ++P     
Sbjct: 6   AIAIGGFDGMHIGHQHLFAE---------------LGEHG-TIVVIETGYANITPKE--- 46

Query: 80  KILEKMGFSAL-IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              E+  FS   I Y    E  +   + FI  +  E+ ++K ++ G  F FGKDR     
Sbjct: 47  ---ERENFSHYPILYLELDEIRHLDGDAFISLLKSEFPKLKKIVVGYDFHFGKDR----- 98

Query: 139 ILQKRGEKYGFH---TVFIDELR-----NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                  KY F    T+F  E++       +   + S  IR  +  G +  A   LG+ +
Sbjct: 99  -------KYSFEDLKTLFSGEVKVVEEVTLEGDSIHSHKIRAKVKIGDIKGANDFLGHNY 151

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           TI   ++ G+ IG+     T N++ +  +  KEGVY    R  D+  Y    +F     +
Sbjct: 152 TIMGALVAGQGIGKKELVATINIEATGFLTPKEGVYVTLTRIDDEEHYHPSVSF-VGHRV 210

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
             +G   +ES I D  + I  ++  +SF  ++R   KF  I +LK  +  D
Sbjct: 211 TTDGSFAIESHILD-GEVICNKKARISFVSFIRDNKKFDSIAELKKAIKSD 260


>gi|73541272|ref|YP_295792.1| FMN adenylyltransferase [Ralstonia eutropha JMP134]
 gi|72118685|gb|AAZ60948.1| FMN adenylyltransferase [Ralstonia eutropha JMP134]
          Length = 278

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 12/186 (6%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS---PITVLSFNPHPRTIIQSS 66
            Q+ P  L   VV+IG FDG+H GH  +L  A++ +  +   P  +L+F+PHPR  +Q  
Sbjct: 5   RQAGPLRLAASVVSIGTFDGVHCGHRAVLA-ALRASGRALGLPTVLLTFDPHPRAFLQPQ 63

Query: 67  SPIFTLSPPSIQEKI---LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           S    +S  ++ ++I    E       +   F    +  SA+ F++ +L+  L ++ ++ 
Sbjct: 64  SAPRMIS--TVDDRIALLAESGAVDHCLVLPFDRALSEASADDFVRGLLLARLGMRRLVV 121

Query: 124 GTKFRFGKDRAGDRGILQKRGE--KYGFHTVFIDELRNNKSQI-VSSSNIRTALTKGHVL 180
           G  FR G+ R GD   L + G+  +Y   +V +         +  SS+  R  +  G V 
Sbjct: 122 GANFRCGRGRQGDIDYLGQLGKSHRYDVESVALHATNATGMDVRCSSTEARRLIQSGDVR 181

Query: 181 NAAHLL 186
            AA LL
Sbjct: 182 AAAALL 187


>gi|219883352|ref|YP_002478513.1| FMN adenylyltransferase [Arthrobacter chlorophenolicus A6]
 gi|219862197|gb|ACL42537.1| FMN adenylyltransferase [Arthrobacter chlorophenolicus A6]
          Length = 279

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 13/212 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +++++E    +P      VV++G FDG+H GH L+L + +     N +   V++F+P 
Sbjct: 1   MKIWNSLE---DVPAETGQTVVSLGCFDGVHRGHQLLLARLLNAAETNAAKSVVVTFDPL 57

Query: 59  PRTII-QSSSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P  ++   ++P+  ++   +++++  LE  G  A++  ++T + A  +AE F++KV V+ 
Sbjct: 58  PAQLLYPETAPLAVMA---LEDRLAALEVEGVDAVLVIRYTRDVAAQAAEVFVEKVFVKT 114

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTA 173
           L    V+ G   RFG+ RAG+   L+  G ++ F    + +      + +  SS+ +R  
Sbjct: 115 LHAAAVVVGEDCRFGQGRAGNIETLRAAGLRWSFDVSVLGDRTAGGTEGRRYSSTWVREV 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
           L+ G V  A  +LG    I  +V       RT
Sbjct: 175 LSSGDVGIAEQILGRPHRIRMEVTRAAGSWRT 206


>gi|23100326|ref|NP_693793.1| FMN adenylylate transferase [Oceanobacillus iheyensis HTE831]
 gi|22778558|dbj|BAC14827.1| riboflavin kinase : FMN adenylylate transferase (riboflavin
           biosynthesis) [Oceanobacillus iheyensis HTE831]
          Length = 275

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G FDG+HLGH  +L+ A ++A    I  T ++F+PHP  +++       L   S +
Sbjct: 19  IMAVGFFDGVHLGHQELLKHAKELARKQNILFTAMTFSPHPDEVLKGDKNRKYLMSLSQK 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K +E +G   L   +F    A+    +FIQK +V     K V+ G  F FG    G+  
Sbjct: 79  IKKMESIGVDKLFVMEFDYTFASLLPAEFIQKYIVNS-NTKHVVVGFDFTFGFKAQGNTT 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQK  EK GF    I + +    + +SS+ +R  + +G+V    + LG  + +   V+ 
Sbjct: 138 YLQKESEKLGFGLSVIPK-KTYLQEKISSTLVRGLIQEGNVDLVPYYLGSNYEVSVHVLQ 196

Query: 199 GEKIGRTLGFPT 210
            +  G  +  P+
Sbjct: 197 YKINGNIIVHPS 208


>gi|86151544|ref|ZP_01069758.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153430|ref|ZP_01071634.1| riboflavin kinase/FAD synthase RibF [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|148925948|ref|ZP_01809635.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|205355439|ref|ZP_03222210.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315124108|ref|YP_004066112.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85841173|gb|EAQ58421.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843156|gb|EAQ60367.1| riboflavin kinase/FAD synthase RibF [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|145844934|gb|EDK22038.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|205346673|gb|EDZ33305.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315017830|gb|ADT65923.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 284

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 135/297 (45%), Gaps = 43/297 (14%)

Query: 22  VAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +AIG FDG+HLGH     +L    A+ + N      L  N     I  S   +  +   S
Sbjct: 16  LAIGCFDGMHLGHLKLVKYLDENGALLVINKFKGQFLCSNRQKEEI--SGKKVIEVDFES 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I  K L+   F + ++ +FT                     +K ++ G  F FGK+RA  
Sbjct: 74  I--KSLDGKDFLSFLKKEFT--------------------SLKFIVVGYDFSFGKNRAYS 111

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++      G  T+ +DE        V +S I+  L++ ++  A   LG  ++I+  V
Sbjct: 112 AKDIEFLS---GIKTIIVDEFSIGGIG-VHASLIKDFLSRANLQKAKEFLGRNYSIKGKV 167

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT----SYSGVANFGRNPTMVP 252
           I G+ +G    F T N+      L + GVYA   ++Q +T    S+ GV +   N  +  
Sbjct: 168 IKGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQRKTYKSVSFLGVRSSDENFAIES 227

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   +LE    +F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 228 H---ILEELGENFTQ---GEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELL 278


>gi|229155680|ref|ZP_04283787.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 4342]
 gi|228627792|gb|EEK84512.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 4342]
          Length = 182

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 13/182 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIP-ELTKSIVSIGAFDGVHRGHQAVIKNAVEKAKVLRITNVVYTFDPPPRSYFQGAK- 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L    +  G  F+
Sbjct: 67  --VLTPIDEKVKRIQSLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFVGQDFK 122

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  + +G +  +  LLG+
Sbjct: 123 FGKNREGNIDLLREH-----FNISIVKDICCDEGERISSTRIRDYVYQGDLQKSNSLLGW 177

Query: 189 RF 190
            F
Sbjct: 178 SF 179


>gi|229196329|ref|ZP_04323077.1| Riboflavin biosynthesis protein [Bacillus cereus m1293]
 gi|228587183|gb|EEK45253.1| Riboflavin biosynthesis protein [Bacillus cereus m1293]
          Length = 182

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 17/184 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIP-ELTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQV 67

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + T     I EK+  ++ +G   +I  +F       SA  FIQ   ++ L    +  G  
Sbjct: 68  LTT-----IDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFIGQD 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G +  ++ LL
Sbjct: 121 FRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYIYHGDLQKSSSLL 175

Query: 187 GYRF 190
           G+ F
Sbjct: 176 GWSF 179


>gi|42781216|ref|NP_978463.1| riboflavin biosynthesis protein, truncated [Bacillus cereus ATCC
           10987]
 gi|42737138|gb|AAS41071.1| riboflavin biosynthesis protein, truncated [Bacillus cereus ATCC
           10987]
          Length = 182

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 13/182 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIP-ELTKSIVSIGAFDGVHKGHQAVIKNAVEKAKVLRITNVVYTFDPPPRSYFQGAK- 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L    +  G  F+
Sbjct: 67  --VLTPIDEKVKRIQSLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFVGQDFK 122

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  + +G +  +  LLG+
Sbjct: 123 FGKNREGNIDLLREH-----FNISIVKDICCDEGERISSTRIRDYVYQGDLQKSNSLLGW 177

Query: 189 RF 190
            F
Sbjct: 178 SF 179


>gi|229818204|ref|ZP_04448486.1| hypothetical protein BIFANG_03501 [Bifidobacterium angulatum DSM
           20098]
 gi|229784455|gb|EEP20569.1| hypothetical protein BIFANG_03501 [Bifidobacterium angulatum DSM
           20098]
          Length = 390

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 150/362 (41%), Gaps = 75/362 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQ---SSSPIFTLSPP 75
           V+ +G FDG+H GH  ++++ +++A  +++   V+ F+P P  +     ++  +   +  
Sbjct: 26  VITLGAFDGMHRGHQAVIDRVVELAKRHDAGSAVMLFDPRPAFVHAHGGNTPEVDADALS 85

Query: 76  SIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            + E+I  +E+ G   +   +++L  A  S   F+ + L   L ++T++ G+    G  R
Sbjct: 86  GVDERIAAMERAGIEQVYVVRYSLAFAEKSYIFFLGQ-LTGKLGMRTLVLGSDAALGAGR 144

Query: 134 AGDRGILQKRGEKYG-FHTVFIDEL--------RNNKSQI-------------------- 164
            GD   +       G F    +D+         RN   Q+                    
Sbjct: 145 KGDVQAIANLAAATGVFELDVVDDRGPGEVRIPRNWMPQMPSKWGEPANPLEGATKAERR 204

Query: 165 -------------VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
                         SSSN+R  L  G +  A  +LG+   +  +V+HGE+ GR++GFPTA
Sbjct: 205 AWSKKHQAKPVRTWSSSNVRYLLGNGRINEADAILGHLHAVTGEVVHGEERGRSIGFPTA 264

Query: 212 NMQLS-PDILLKEGVYA--------------IRFRTQ------DQTSYSGVANFGRNPT- 249
           N+  S    L  +GVYA              +  R +          +    + G  PT 
Sbjct: 265 NLGASITGYLPVDGVYAGWLVDLGKAPANAGLEDRVELVCNAVGAQRWPAAISIGTKPTF 324

Query: 250 --MVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                    ++E++       E+YG    V F  +LRP++KF   ++L   +  + +  R
Sbjct: 325 SEATGRYERVVEAYCLSEDWLELYGHTVRVEFAGFLRPQVKFGSADELVAELKRNVQTTR 384

Query: 307 KI 308
           +I
Sbjct: 385 EI 386


>gi|138896796|ref|YP_001127249.1| riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268309|gb|ABO68504.1| Riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 179

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF--NPHPRTIIQS 65
           E NQ L   L G VVAIG FDG+H GH  +L QA++ +    +  +++  +P PR   Q 
Sbjct: 5   EANQGLT--LPGSVVAIGAFDGVHQGHQAVLRQAVERSRQLGVESVAYTIDPPPRCRFQG 62

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           S  + TL     QEK+     +G +  +   F    A    + FI+++    L  + VI 
Sbjct: 63  SRMLTTL-----QEKLDRFAVLGLNHAVVAHFDERYAARRVDAFIRELTA--LNPREVIV 115

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG++R GD  +L++      F    +  +     Q +SS+ IR  + +G    + 
Sbjct: 116 GQDFRFGRNREGDVALLRRH-----FPVRIVQTVCCADGQRISSTRIRELIERGEWEQST 170

Query: 184 HLLGY 188
            LLG+
Sbjct: 171 VLLGW 175


>gi|196046046|ref|ZP_03113274.1| riboflavin kinase (Flavokinase) [Bacillus cereus 03BB108]
 gi|225864044|ref|YP_002749422.1| riboflavin kinase [Bacillus cereus 03BB102]
 gi|228914685|ref|ZP_04078294.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229091079|ref|ZP_04222302.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|229184303|ref|ZP_04311510.1| Riboflavin biosynthesis protein [Bacillus cereus BGSC 6E1]
 gi|196023101|gb|EDX61780.1| riboflavin kinase (Flavokinase) [Bacillus cereus 03BB108]
 gi|225790442|gb|ACO30659.1| riboflavin kinase [Bacillus cereus 03BB102]
 gi|228599099|gb|EEK56712.1| Riboflavin biosynthesis protein [Bacillus cereus BGSC 6E1]
 gi|228692210|gb|EEL45946.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|228845004|gb|EEM90046.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 182

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 17/184 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIP-ELTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQV 67

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + T     I EK+  ++ +G   +I  +F       SA  FIQ   ++ L    +  G  
Sbjct: 68  LTT-----IDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFIGQD 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G +  ++ LL
Sbjct: 121 FRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYVYHGDLQKSSSLL 175

Query: 187 GYRF 190
           G+ F
Sbjct: 176 GWSF 179


>gi|118477512|ref|YP_894663.1| riboflavin biosynthesis protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416737|gb|ABK85156.1| riboflavin biosynthesis protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 194

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 17/184 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 21  QCIP-ELTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQV 79

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + T     I EK+  ++ +G   +I  +F       SA  FIQ   ++ L    +  G  
Sbjct: 80  LTT-----IDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFIGQD 132

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G +  ++ LL
Sbjct: 133 FRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYVYHGDLQKSSSLL 187

Query: 187 GYRF 190
           G+ F
Sbjct: 188 GWSF 191


>gi|312110662|ref|YP_003988978.1| FAD synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215763|gb|ADP74367.1| FAD synthetase [Geobacillus sp. Y4.1MC1]
          Length = 285

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPS 76
            V A+G FDG+HLGH  +++   K+A    +   V+SF PHP+ II ++   +  L PP+
Sbjct: 20  AVAALGFFDGVHLGHQKVIQTTKKLAEKMGLKTAVISFFPHPKEIIGKTGERVHYLLPPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + K   ++G       +FT E A    ++F+QK L+  L++K  + G  F +G+   G+
Sbjct: 80  EKAKKFSRLGVDYFYLIRFTPEFARLEPKEFVQKYLIP-LQIKHAVAGYDFSYGRKGKGN 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             ++++    Y      ++ ++ N  +I SS+ IR  +  G +      LG  +  +  +
Sbjct: 139 LAMMEE-DSGYSITVTKVEHVKRNDEKI-SSTLIRNKIRLGLMEELPDYLGEFYETKGKM 196

Query: 197 I 197
           I
Sbjct: 197 I 197


>gi|331696103|ref|YP_004332342.1| FAD synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950792|gb|AEA24489.1| FAD synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 243

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
            +E+        +   VAIG FDG+H+GH     Q I   +    TVL+F+PHP  +++ 
Sbjct: 6   TVEVTDDASVRRRPRAVAIGVFDGVHIGH----AQVIAGCD----TVLTFDPHPLQVLRP 57

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 L+    +   L  +G   ++  +F    A  +A  F+  +LV  L   TV  G 
Sbjct: 58  DDVPALLTTVPTKVARLAALGVREVVVLRFDARWAAVAAPSFVDDLLVGRLGAHTVSVGA 117

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG    G   +L++ G    F T  +  L  + + +VSSS IR +L+ G +     L
Sbjct: 118 NFRFGAGGEGSGHVLRRDGR---FRT-RVTPLVRSAAGVVSSSRIRASLSSGDIGAVTRL 173

Query: 186 LG 187
           LG
Sbjct: 174 LG 175


>gi|300118215|ref|ZP_07055963.1| riboflavin kinase [Bacillus cereus SJ1]
 gi|298724526|gb|EFI65220.1| riboflavin kinase [Bacillus cereus SJ1]
          Length = 182

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 17/184 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQV 67

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + T     I EK+  ++ +G   +I  +F       SA  FIQ   ++ L    +  G  
Sbjct: 68  LTT-----IDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFIGQD 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G +  ++ LL
Sbjct: 121 FRFGKNREGNIELLREH-----FNISIVKDVCCDEGERISSTRIRDYVYHGDLQKSSSLL 175

Query: 187 GYRF 190
           G+ F
Sbjct: 176 GWSF 179


>gi|227508027|ref|ZP_03938076.1| possible FAD synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227192526|gb|EEI72593.1| possible FAD synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 277

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG+H GH  +++ A KIAN    P+ V++FN H   I    SSS    L+   
Sbjct: 21  VLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRHASRIFHHDSSSTFRYLTTLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +++EK+    L    F    A  S + FI+K ++  L  K V+ G  + FG+   G 
Sbjct: 81  QKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GLNAKIVVAGFDYTFGQ--GGT 137

Query: 137 RGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             I        +   TV + EL + + +I  SS IR  + +G +  A  LLG+ +     
Sbjct: 138 TTIDSMAAISNHRIQTVTVRELDSQRLKI-GSSRIRKLIGQGRIKEANKLLGHPYETTGK 196

Query: 196 VIHGEKIGRTLGFPTANMQLSP 217
           +IH +  G ++  P++ +Q  P
Sbjct: 197 LIHAQIDGLSIVNPSSRLQQLP 218


>gi|227511048|ref|ZP_03941097.1| possible FAD synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227085790|gb|EEI21102.1| possible FAD synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 277

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ--SSSPIFTLSPPS 76
           V+A+G FDG+H GH  +++ A KIAN    P+ V++FN H   I    SSS    L+   
Sbjct: 21  VLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRHASRIFHHDSSSTFRYLTTLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +++EK+    L    F    A  S + FI+K ++  L  K V+ G  + FG+   G 
Sbjct: 81  QKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GLNAKIVVAGFDYTFGQ--GGT 137

Query: 137 RGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             I        +   TV + EL + + +I  SS IR  + +G +  A  LLG+ +     
Sbjct: 138 TTIDSMAAISNHRIQTVTVRELDSQRLKI-GSSRIRKLIGQGRIKEANKLLGHPYETTGK 196

Query: 196 VIHGEKIGRTLGFPTANMQLSP 217
           +IH +  G ++  P++ +Q  P
Sbjct: 197 LIHAQIDGLSIVNPSSRLQQLP 218


>gi|196039657|ref|ZP_03106961.1| Riboflavin kinase [Bacillus cereus NVH0597-99]
 gi|196029360|gb|EDX67963.1| Riboflavin kinase [Bacillus cereus NVH0597-99]
          Length = 182

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 17/184 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  L   +V+IG FDG+H GH  +++ A++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPPPRSYFQGAQV 67

Query: 69  IFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           + T     I EK+  ++ +G   +I  +F       SA  FIQ   ++ L    +  G  
Sbjct: 68  LTT-----IDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSPVEIFIGQD 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G +  ++ LL
Sbjct: 121 FRFGKNREGNIELLREH-----FNLSIVKDVCCDEGERISSTRIRDYVYHGDLQKSSSLL 175

Query: 187 GYRF 190
           G+ F
Sbjct: 176 GWSF 179


>gi|254555876|ref|YP_003062293.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
 gi|254044803|gb|ACT61596.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
          Length = 282

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  +++ A +IA     P+ V++FN H   + +S +    L+  + +
Sbjct: 21  VLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMTFNRHASQLFKSQTTFRYLNTVAQK 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + +  +    L    F  + A  +   FI+  LV  L  + V+ G  + FG+  A    
Sbjct: 81  SQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLVG-LNAQVVVAGFDYTFGQGGANGMR 139

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + G  Y F TV +D L N + + VSS+ IR  + +G +  A  LLGY +  ++    
Sbjct: 140 ELAELGAPY-FETVTVDRLANQQLK-VSSTRIRGLIARGQIEQANDLLGYTYATQATF-- 195

Query: 199 GEKIGRTLGFPTANMQL 215
            + + RT+       QL
Sbjct: 196 -DPLTRTIQLANRQQQL 211


>gi|300767669|ref|ZP_07077579.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300494654|gb|EFK29812.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 290

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  +++ A +IA     P+ V++FN H   + +S +    L+  + +
Sbjct: 29  VLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMTFNRHASQLFKSQTTFRYLNTVAQK 88

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + +  +    L    F  + A  +   FI+  LV  L  + V+ G  + FG+  A    
Sbjct: 89  SQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLVG-LNAQVVVAGFDYTFGQGGANGMR 147

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + G  Y F TV +D L N + + VSS+ IR  + +G +  A  LLGY +  ++    
Sbjct: 148 ELAELGAPY-FETVTVDRLANQQLK-VSSTRIRGLIARGQIEQANDLLGYTYATQATF-- 203

Query: 199 GEKIGRTLGFPTANMQL 215
            + + RT+       QL
Sbjct: 204 -DPLTRTIQLANRQQQL 219


>gi|327438122|dbj|BAK14487.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 270

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFT-LSPPSI 77
           V+A+G FDGIHLGH  +++ A + AN    P+ V+SF PHP  ++     I   L+ P  
Sbjct: 22  VMALGYFDGIHLGHQQVIKTAREEANKRGLPLAVMSFRPHPINVLSKGQSIVPHLTTPCE 81

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +EK L+++G        FTL  A  ++ QF++  L++ L V   + G  F +G    G  
Sbjct: 82  KEKRLKQLGVDLFYLVDFTLAFAALTSSQFVEDYLMK-LGVVHAVAGFDFSYGVK--GVA 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            + Q   +  G  TV   E  +   + +SSS IR  L    V    H LG  F
Sbjct: 139 KLSQIVADSNGEITVTKVECIDYDGEKISSSAIRQRLLAAAVHEIPHFLGDHF 191


>gi|167835733|ref|ZP_02462616.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 159

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 61/121 (50%)

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   V HG K+GR LGFPT N+ ++       G++ +           GVA+ G
Sbjct: 13  LGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIAPEPLPGVASLG 72

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   + +D    
Sbjct: 73  VRPTIDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARAIAQDVVDT 132

Query: 306 R 306
           R
Sbjct: 133 R 133


>gi|255292447|dbj|BAH89564.1| riboflavin kinase/FMN adenylyltransferase [uncultured bacterium]
          Length = 276

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 16/177 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++  +     
Sbjct: 98  LDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVCTFDPPPRVAFGAAEKLI---- 153

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              +E+I  L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+D
Sbjct: 154 -DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELAA--LSPVALWVGDDFRFGRD 210

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           RAGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG++
Sbjct: 211 RAGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGWQ 262


>gi|57238215|ref|YP_178704.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni RM1221]
 gi|57167019|gb|AAW35798.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni RM1221]
 gi|315058003|gb|ADT72332.1| Riboflavin kinase / FMN adenylyltransferase [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 284

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 43/297 (14%)

Query: 22  VAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +AIG FDG+HLGH     +L    A+ + N      L  N     I  S   +  +   S
Sbjct: 16  LAIGCFDGMHLGHLKLVKYLDENGALLVINKFKGQFLCSNRQKEEI--SGKKVIEVDFES 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I  K L+   F + ++ +FT                     +K ++ G  F FGK+RA  
Sbjct: 74  I--KSLDGKDFLSFLKKEFT--------------------SLKFIVVGYDFSFGKNRAYS 111

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++      G  T+ +DE        V +S I+  L++ ++      LG  ++I+  V
Sbjct: 112 AKDIEFLS---GIKTIIVDEFSIGGIG-VHASLIKDFLSRANLQKVKEFLGRNYSIKGKV 167

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT----SYSGVANFGRNPTMVP 252
           I G+ +G    F T N+      L + GVYA   ++Q +T    S+ GV +   N  +  
Sbjct: 168 IKGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQRKTYKSVSFLGVRSSDENFAIES 227

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   +LE    +F+Q   G+   + F  +LR   KF+D++KLK  + +D ++AR++L
Sbjct: 228 H---ILEELGENFTQ---GEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELL 278


>gi|257460493|ref|ZP_05625594.1| riboflavin biosynthesis protein RibF [Campylobacter gracilis
           RM3268]
 gi|257441824|gb|EEV16966.1| riboflavin biosynthesis protein RibF [Campylobacter gracilis
           RM3268]
          Length = 460

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 27/247 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            VAIGNFDG+HLGH  + E              +   H   I+  +     L+P + ++ 
Sbjct: 132 AVAIGNFDGMHLGHQKLFE--------------NLGEHGAIIVILAGGGTKLTPFASRQA 177

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
             +K  F   +R   +L     S  +FI  +   ++ ++ ++ G  FRFG+DRA D   L
Sbjct: 178 FTDKKIFYCDLRAIKSL-----SGGEFIALLRQNFINLQKIVVGEDFRFGRDRAWDVEFL 232

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++   ++   T  + E   +    V SS I+  L++G    AA LLG  + I   ++ G+
Sbjct: 233 RR---EFRGRTCVVGEFCLSGGG-VHSSRIKELLSRGRCEEAAELLGRDYEICGRIVRGQ 288

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
             G      T N+  S   + K GVYA   R + +  ++ V+  G    +  +G   LE+
Sbjct: 289 GRGAREFVATLNLDASGYFMPKSGVYATLARAESK-EFASVSFLGHR--LSTDGAFALET 345

Query: 261 FIF-DFS 266
            I  DF+
Sbjct: 346 HILGDFA 352


>gi|237751770|ref|ZP_04582250.1| riboflavin kinase/FAD synthase RibF [Helicobacter bilis ATCC 43879]
 gi|229373136|gb|EEO23527.1| riboflavin kinase/FAD synthase RibF [Helicobacter bilis ATCC 43879]
          Length = 294

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 37/308 (12%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VAIG FDG+H  H  +L   +   N   +++ S  P          P  T  PP      
Sbjct: 17  VAIGKFDGMHKAHKYLL--GLVGTNGCALSIASVKP----------PFIT--PPK----- 57

Query: 82  LEKMGFSALIRYKFTLET-ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR---AGD- 136
            E+  ++ +  ++   E+  ++ + QF+Q + +    +K ++ G  F FGKDR   A D 
Sbjct: 58  -ERTKYTHIPFFRLRFESIKSWDSMQFLQLLFMVMPHLKCIVIGYDFHFGKDRMSHASDL 116

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            G+L++ G+      +   +   N    + +S I+  L +G + NA  +L   + I+  +
Sbjct: 117 YGLLKRMGKAEVQIKIIAPQTYLNIP--LHTSIIKDLLKQGEIQNANAMLERFYHIKGRI 174

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           I G+ IG    +PT NM+ +   + K GVYA  F   +   Y+ V+  G       +   
Sbjct: 175 IKGQGIGSKELYPTINMKNTLYFVPKHGVYAT-FAYYNGMLYNAVSFVGNR--FSTDERF 231

Query: 257 LLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            +E+ I + +    + +  T+ F  YLR   KF ++  LKI +  D      I ++   L
Sbjct: 232 CIETHIINETINTKHNEVITIFFVAYLRDNKKFLNLNDLKIQIESD------ITDAKEKL 285

Query: 316 SERDRIIC 323
           S  DR  C
Sbjct: 286 STHDRTYC 293


>gi|302786374|ref|XP_002974958.1| hypothetical protein SELMODRAFT_56433 [Selaginella moellendorffii]
 gi|300157117|gb|EFJ23743.1| hypothetical protein SELMODRAFT_56433 [Selaginella moellendorffii]
          Length = 190

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 22/188 (11%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L G VVA+G FD +H+GH  + EQA ++    P  VLSF      I+     +  ++P  
Sbjct: 1   LAGSVVALGKFDALHIGHRSLAEQASRMG---PPVVLSFTGMGE-ILGWDKRLPVVAPCD 56

Query: 77  -IQEKILEKMGFSALIRYKFTLE---TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +  +L     S L   +F+LE     + S +QF++K+ VE L VK V+ G  +RFG  
Sbjct: 57  RARVMLLWSAQCSGLTPDEFSLEFGKVRHLSPQQFVEKLAVE-LRVKGVVAGENYRFGYK 115

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALTKGHV 179
            AGD   L+K  +++G     ++ + +   Q              VSS+ +R AL  G++
Sbjct: 116 AAGDSSELKKLCKEWGLDVFVVEAVMDKFDQAPSSVQGDARDRGQVSSTRVRKALADGNM 175

Query: 180 LNAAHLLG 187
               +LLG
Sbjct: 176 KRVTNLLG 183


>gi|229085072|ref|ZP_04217323.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-44]
 gi|228698197|gb|EEL50931.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-44]
          Length = 182

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 16/172 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V+IG FDG+H GH  ++  A++ +    IT  V +F+P PRT  Q    +      SI 
Sbjct: 18  IVSIGAFDGVHKGHQTVIRNAVEKSQELKITNVVYTFDPPPRTYFQGDEVL-----TSID 72

Query: 79  EKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           EK+   + +G   ++  +F       +A  FIQ+  ++ L    +  G  FRFGK+R GD
Sbjct: 73  EKLNRFQDLGVERVVVNRFDESYVTRTASHFIQE--LQRLCPAGIYVGEDFRFGKNREGD 130

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
             +L K      F    ++E+     + +SS+ IR  L +G +  +  LLG+
Sbjct: 131 IELLMKY-----FAVSIVEEICCEGGERISSTRIRNHLFQGELQRSHSLLGW 177


>gi|227523239|ref|ZP_03953288.1| possible FAD synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227089626|gb|EEI24938.1| possible FAD synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 277

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 9/202 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP-RTIIQSSSPIFT-LSPPS 76
           V+A+G FDG+H GH  +++ A KIAN    P+ V++FN H  R+    SS  F  L+   
Sbjct: 21  VLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRHASRSFHHDSSSTFRYLTTLK 80

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +++EK+    L    F    A  S + FI+K ++  L  K V+ G  + FG+   G 
Sbjct: 81  QKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GLNAKIVVAGFDYTFGQ--GGT 137

Query: 137 RGILQKRG-EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             I        +   TV + EL + + +I  SS IR  + +G +  A  LLG+ +     
Sbjct: 138 TTIDSMAAISNHRIQTVTVRELDSQRLKI-GSSRIRKLIGQGRIKEANKLLGHPYETTGK 196

Query: 196 VIHGEKIGRTLGFPTANMQLSP 217
           +IH +  G ++  P++ +Q  P
Sbjct: 197 LIHAQIDGLSIVNPSSRLQQLP 218


>gi|255292713|dbj|BAH89819.1| riboflavin biosynthesis protein RibF [uncultured bacterium]
          Length = 276

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 16/177 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++  +     
Sbjct: 98  LDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVYTFDPPPRVAFGAAEKLI---- 153

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              +E+I  L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+D
Sbjct: 154 -DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELAA--LSPVALWVGDDFRFGRD 210

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           RAGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG++
Sbjct: 211 RAGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGWQ 262


>gi|308182531|ref|YP_003926658.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori PeCan4]
 gi|308064716|gb|ADO06608.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori PeCan4]
          Length = 280

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +L A  LLG  + +  +VI
Sbjct: 116 FLKERFEK----TIIVPEVKIQNIS--VHSKIIKLALSHGDLLLANKLLGRPYEVCGEVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    
Sbjct: 170 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 228 IECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|255292765|dbj|BAH89870.1| riboflavin kinase [uncultured bacterium]
 gi|255292907|dbj|BAH90006.1| riboflavin kinase [uncultured bacterium]
 gi|255293183|dbj|BAH90274.1| riboflavin kinase [uncultured bacterium]
          Length = 286

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 16/176 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++  +     
Sbjct: 57  LDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVYTFDPPPRVAFGAAEKLI---- 112

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              +E+I  L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+D
Sbjct: 113 -DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELAA--LSPVALWVGDDFRFGRD 169

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           RAGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG+
Sbjct: 170 RAGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGW 220


>gi|28377693|ref|NP_784585.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|28270526|emb|CAD63430.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
          Length = 282

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  +++ A +IA     P+ V++FN H   + +S +    L+  + +
Sbjct: 21  VLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMTFNRHASQLFKSQTTFRYLNTVAQK 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + +  +    L    F  + A  +   FI+  LV  L  + V+ G  + FG+       
Sbjct: 81  SQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLVG-LNAQVVVAGFDYTFGQGGTNGMR 139

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + G  Y F TV +D L N + + VSS+ IR  + +G +  A  LLGY +  ++    
Sbjct: 140 ELAELGAPY-FETVTVDRLANQQLK-VSSTRIRGLIARGQIEQANDLLGYTYATQATF-- 195

Query: 199 GEKIGRTLGFPTANMQL 215
            + + RT+       QL
Sbjct: 196 -DPLTRTIQLANRQQQL 211


>gi|188527168|ref|YP_001909855.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Shi470]
 gi|188143408|gb|ACD47825.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Shi470]
          Length = 280

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++     S  + + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLV-----SMPLFFVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDSIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|229017402|ref|ZP_04174305.1| Riboflavin biosynthesis protein [Bacillus cereus AH1273]
 gi|229023578|ref|ZP_04180073.1| Riboflavin biosynthesis protein [Bacillus cereus AH1272]
 gi|228737740|gb|EEL88241.1| Riboflavin biosynthesis protein [Bacillus cereus AH1272]
 gi|228743965|gb|EEL94064.1| Riboflavin biosynthesis protein [Bacillus cereus AH1273]
          Length = 176

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 13/179 (7%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           Q +P  +K  +V+IG FDG+H GH  +++  ++ A    IT  V +F+P PR+  Q +  
Sbjct: 9   QCIPELMKS-IVSIGAFDGVHKGHQTVIKNTVEKAKELKITNVVYTFDPPPRSYFQGAQ- 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K L+ +G   +I  +F       SA  F+Q   ++ L    +  G  FR
Sbjct: 67  --ILTPIEEKVKRLQNLGVEHVIVIRFDESYITKSASCFVQD--LKRLNPVDIYIGQDFR 122

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           FGK+R G+  +L++      F+   + ++   + + +SS+ IR  +  G +  ++ LLG
Sbjct: 123 FGKNREGNIELLREH-----FNISIVKDVCCEEGERISSTRIRNYVCHGELQKSSALLG 176


>gi|297379581|gb|ADI34468.1| riboflavin biosynthesis protein RibF [Helicobacter pylori v225d]
          Length = 280

 Score = 75.5 bits (184), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E ++ +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISSLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G+   +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGKR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|152992059|ref|YP_001357780.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Sulfurovum
           sp. NBC37-1]
 gi|151423920|dbj|BAF71423.1| riboflavin biosynthesis regulatory protein RibF [Sulfurovum sp.
           NBC37-1]
          Length = 273

 Score = 75.5 bits (184), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDG+H+ H  ++E          I V+  N               L+P   +   
Sbjct: 10  IAIGSFDGMHVAHMKVVEAV------DAIVVIERNGG------------YLTPGYKRSLY 51

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            +KM       + F     + S E F++K+  ++  ++ ++ G  F FGK++AG    L+
Sbjct: 52  TDKM-----CCFYFFDTIKSLSPEDFVEKLNEDFPRLERIVVGYDFAFGKNKAGSATTLR 106

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +  +K     V +DE+   +   V S  I+  L +G++  A  LLG  ++I+  VI G+ 
Sbjct: 107 ELFDK---EVVIVDEI-CLEGIPVHSRTIKAYLREGNIYMANKLLGRHYSIKGRVIPGQG 162

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G+    PT N+++    L  EGVYA + +    + Y  V+  G   +   +G   +E+ 
Sbjct: 163 LGKKALVPTLNLKVEHYQLPLEGVYATQTKI-GSSWYHSVSFLGHRVS--TDGSFAVETH 219

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           I D    +      + F   +R   KF  ++ LK  + +D ++A  +L  S
Sbjct: 220 IIDKDIGMVEGEIILEFRALIRKNRKFDTLDMLKGQIEKDIERATALLNES 270


>gi|157414871|ref|YP_001482127.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385835|gb|ABV52150.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315931788|gb|EFV10743.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 283

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 15  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 69

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA +   ++
Sbjct: 70  FESI--------------KSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYNAKDIE 115

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 116 FLS---GIKTIIVDEFSIGGIG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 171

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N  +  +   +
Sbjct: 172 LGSKELFATINLDCKGYFLPQNGVYATLLKSQRKIYKSVSFLGIRSSDENFAIESH---I 228

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE     F+Q   G+   + F  +LR   KF+D++KLK  + +D ++A+++L
Sbjct: 229 LEELGEKFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQAKELL 277


>gi|307747508|gb|ADN90778.1| riboflavin kinase/FAD synthase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 284

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH   L+    +  N  + V+  N      + S+     +S   + E  
Sbjct: 16  LAIGCFDGMHLGH---LKLVKCLDENGALLVI--NKFKGQFLCSNRQKEEISGKKVIEVD 70

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E +               +   + F+  +  E++ +K ++ G  F FGK+RA +   ++
Sbjct: 71  FESI--------------KSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYNAKDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G+ 
Sbjct: 117 FLS---GIKTIIVDEFSIGGIG-VHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ----TSYSGVANFGRNPTMVPNGPLL 257
           +G    F T N+      L + GVYA   ++Q +     S+ G+ +   N  +  +   +
Sbjct: 173 LGSKELFATINLDCKGYFLPQNGVYATLLKSQRKIYKSVSFLGIRSSDENFAIESH---I 229

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE     F+Q   G+   + F  +LR   KF+D++KLK  + +D ++A+++L
Sbjct: 230 LEELGEKFTQ---GEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQAKELL 278


>gi|325995644|gb|ADZ51049.1| Riboflavin kinase / FMN adenylyltransferase [Helicobacter pylori
           2018]
 gi|325997240|gb|ADZ49448.1| Riboflavin kinase / FMN adenylyltransferase [Helicobacter pylori
           2017]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+++   F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVKMPLF-----FVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +  A  LLG  + +  +VI
Sbjct: 116 FLKERFEK----TIIVPEVKIQNIS--VHSKIIKLALSHGDLSLANKLLGRYYEVCGEVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    
Sbjct: 170 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 228 IECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEIL 279


>gi|307637052|gb|ADN79502.1| riboflavin kinase/FMN adenylyltransferase [Helicobacter pylori 908]
          Length = 279

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 15  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+++   F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 60  AKLVKMPLF-----FVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 114

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +  A  LLG  + +  +VI
Sbjct: 115 FLKERFEK----TIIVPEVKIQNIS--VHSKIIKLALSHGDLSLANKLLGRYYEVCGEVI 168

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    
Sbjct: 169 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFA 226

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 227 IECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEIL 278


>gi|317012200|gb|ADU82808.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Lithuania75]
          Length = 280

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +L A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLLLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSADQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 229 ECHVLDAIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEIL 279


>gi|315586352|gb|ADU40733.1| riboflavin biosynthesis protein RibF [Helicobacter pylori 35A]
          Length = 280

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG++R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGRERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANQLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|224373027|ref|YP_002607399.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nautilia
           profundicola AmH]
 gi|223588523|gb|ACM92259.1| riboflavin biosynthesis protein RibF [Nautilia profundicola AmH]
          Length = 255

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 51/291 (17%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
            AIG FDG+HLGH  +++++  +                 +I+  S    L+P S     
Sbjct: 3   AAIGGFDGMHLGHQALIKRSDMLV----------------VIEKGS---NLTPGS----- 38

Query: 82  LEKMGFSALIRYKFTL-ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            ++  ++ L    F L +  + S  +FI   +++ L +  ++ G  FRFGK+R+GD  +L
Sbjct: 39  -DRCDYTNLPCKFFDLNDIKDLSPIEFI--AILKELNITKIVVGKDFRFGKNRSGDLDLL 95

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
               E      V ID +       V S  IR  +  G +  A   LG+ + I+   I G+
Sbjct: 96  NNHFEIDAIEEVKIDGIG------VHSRIIREFIKNGEITKANRFLGHTYKIKGKQIKGQ 149

Query: 201 KIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGV----ANFG-RNPTMVPNG 254
            +G     PT N+ L  + L+ K+GVY          ++ G      NF      +  N 
Sbjct: 150 GLGGKELVPTININLLKNYLIPKQGVYITLTNKHPSLTFVGTRSTDGNFSIETHILTKNM 209

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E+ IF            + F +YLR   KF +++ LK  + +D  KA
Sbjct: 210 ELKIETDIF-----------KIEFLEYLRENKKFNNLKDLKKQIRQDILKA 249


>gi|15611406|ref|NP_223057.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori J99]
 gi|4154866|gb|AAD05918.1| RIBOFLAVIN KINASE [Helicobacter pylori J99]
          Length = 280

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+++   F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVKMPLF-----FVYLEEISQLNALEFLDLLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +  A  LLG  + +  +VI
Sbjct: 116 FLKERFEK----TIIVPEVKIQNIS--VHSKIIKLALSHGDLSLANKLLGRYYEVCGEVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +DQ     V+  G   +   N    
Sbjct: 170 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNRLSTDHN--FA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 228 IECHVLDTIIENPPKEIALRWVQKIRDNMRFNSLKELKNQIQQDILMAKEIL 279


>gi|145640633|ref|ZP_01796216.1| hypothetical protein CGSHiR3021_06190 [Haemophilus influenzae
           R3021]
 gi|145274559|gb|EDK14422.1| hypothetical protein CGSHiR3021_06190 [Haemophilus influenzae
           22.4-21]
          Length = 158

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 6/137 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   PR      +    L  
Sbjct: 14  LQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQPREYFMGKNAPARLM- 72

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +++KI  LEK     +I  KF    A   A+ FI++ LV  L VK +  G  F+FG  
Sbjct: 73  -RLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHVKFLSIGDDFKFGSK 131

Query: 133 RAGDRGILQKRGEKYGF 149
           R G+  +LQ   +++ F
Sbjct: 132 RQGNFAMLQAASKRFWF 148


>gi|261839210|gb|ACX98975.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori 52]
          Length = 280

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG++R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGRERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|317181703|dbj|BAJ59487.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F57]
          Length = 280

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E ++ +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISSLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|313157312|gb|EFR56737.1| regulatory protein RibR family protein [Alistipes sp. HGB5]
          Length = 121

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           IE  V HG ++GR LGFPTAN+ +   +  ++GVY  R    D   Y  ++N GRNP+ V
Sbjct: 6   IEGVVEHGRRLGRELGFPTANVAVPDSVAAEDGVYRSRA-EMDGAVYDAMSNLGRNPS-V 63

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
                 LE+ IF F   +YG+   V   + +R E +F  +E+L+  + +D
Sbjct: 64  GGTARRLETHIFGFRGALYGRMLRVELLEKIRDERRFDTLEELRAQIEKD 113


>gi|210134555|ref|YP_002300994.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori P12]
 gi|210132523|gb|ACJ07514.1| bifunctional riboflavin kinase / FMN adenylyltransferase
           [Helicobacter pylori P12]
          Length = 280

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +L A  LLG  + +   VI
Sbjct: 116 FLKERFEK----TIIVPEVKIQNIS--VHSKTIKLALSHGDLLLANKLLGRPYEVCGKVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    
Sbjct: 170 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 228 IECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|308061711|gb|ADO03599.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Cuz20]
          Length = 280

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKIEEIS-VHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|257457662|ref|ZP_05622829.1| riboflavin kinase/FMN adenylyltransferase [Treponema vincentii ATCC
           35580]
 gi|257445048|gb|EEV20124.1| riboflavin kinase/FMN adenylyltransferase [Treponema vincentii ATCC
           35580]
          Length = 274

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 3/178 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V+IG FDG H GH LIL   +K A     P  +++F   PR++   S+    +S  
Sbjct: 18  QGTAVSIGGFDGPHRGHELILSAVLKAAQRKAIPAGIITFFRSPRSVKAGSTYAGDVSTL 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ +   + GFS  +   F+ + A      F   +L++ + +K +  G+ F  G     
Sbjct: 78  EMRLQKFAEQGFSFTVLIDFSADFAKMKGAVFFD-ILIKTICIKYLAVGSDFTCGYRHDT 136

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             G LQ+   + GF    I++L + + + +SSS IR A+ +     A  LLGY F ++
Sbjct: 137 GVGDLQRLARERGFCFDSIEQLYSAQHERISSSAIRQAVEQADFTLAKDLLGYPFFLD 194


>gi|15645701|ref|NP_207878.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori 26695]
 gi|2314235|gb|AAD08130.1| riboflavin biosynthesis regulatory protein (ribC) [Helicobacter
           pylori 26695]
          Length = 280

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A  F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALDFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKVQEIS-VHSKMIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G   +   N    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNRLSTDQN--FAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|157738062|ref|YP_001490746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Arcobacter
           butzleri RM4018]
 gi|157699916|gb|ABV68076.1| bifunctional riboflavin kinase/FAD synthase RibF [Arcobacter
           butzleri RM4018]
          Length = 281

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 29/281 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+H+ H  + +    +  N  I  +             S    L+P S +++ 
Sbjct: 17  IAIGGFDGMHIAHQELFKN---LGENGAIVSIE------------SGFANLTPKSYRQE- 60

Query: 82  LEKMGFSALIRYKFTLET-ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                +S    Y + L+        +FI+ +  E+ +++ ++ G  F FGK+R+     L
Sbjct: 61  -----YSKYPIYYYVLDNIKKLEGIEFIKLLKEEFPKLEKIVVGYDFCFGKNRSCSTQDL 115

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   E +    + I E++ +    V S  IR  +  G++  A  LLG  + I   +  G+
Sbjct: 116 E---ELFDGEVIIIPEIKVDNIA-VHSRTIREFIKDGNIELANKLLGKEYKIYGFLQKGQ 171

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G T   PT N+ +   +L KEG+Y I     D+  YS V+  G   T   +G   +E+
Sbjct: 172 GLGTTNFVPTINLTIDEFLLPKEGIY-ISKTVVDEIEYSSVSFLGHRAT--TDGNYAVET 228

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            I D + E+      + F   +R   KF   E+LK  + +D
Sbjct: 229 HILDKNIEVNNHNIQIKFIKRVRDNQKFDSFEELKKQILDD 269


>gi|108562785|ref|YP_627101.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori HPAG1]
 gi|107836558|gb|ABF84427.1| riboflavin kinase [Helicobacter pylori HPAG1]
          Length = 280

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E ++ +A +F++ +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISHLNASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++R EK    T+ + E++  N S  V S  I+ AL+ G +  A  LLG  + +   VI
Sbjct: 116 FLKERFEK----TIIVPEVKIQNIS--VHSKMIKLALSHGDLSLANKLLGRPYEVCGKVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    
Sbjct: 170 SDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNR--LSTDQHFA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   Q   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 228 IECHVLDTIIENPPQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|302791225|ref|XP_002977379.1| hypothetical protein SELMODRAFT_56432 [Selaginella moellendorffii]
 gi|300154749|gb|EFJ21383.1| hypothetical protein SELMODRAFT_56432 [Selaginella moellendorffii]
          Length = 190

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 22/188 (11%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L G VVA+G FD +H+GH  + EQA ++    P  VLSF      I+     +  ++P  
Sbjct: 1   LAGSVVALGKFDALHIGHRSLAEQASRMG---PPVVLSFTGMGE-ILGWDKRLPVVAPCD 56

Query: 77  -IQEKILEKMGFSALIRYKFTLE---TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +  +L     S L   + +LE     + S +QF++K+ VE L VK V+ G  +RFG  
Sbjct: 57  RARVMLLWSAQCSGLTPDECSLEFGKVRHLSPQQFVEKLAVE-LRVKGVVAGENYRFGYK 115

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALTKGHV 179
            AGD   L+K  +++G     ++ + +   Q              VSS+ +R AL  G++
Sbjct: 116 AAGDSSELKKLCKEWGLDVFVVEAVMDKFDQAPSSVQGDARDRGQVSSTRVRKALADGNM 175

Query: 180 LNAAHLLG 187
               +LLG
Sbjct: 176 KRVTNLLG 183


>gi|217033348|ref|ZP_03438779.1| hypothetical protein HP9810_9g101 [Helicobacter pylori 98-10]
 gi|216944289|gb|EEC23714.1| hypothetical protein HP9810_9g101 [Helicobacter pylori 98-10]
 gi|261837796|gb|ACX97562.1| riboflavin kinase [Helicobacter pylori 51]
 gi|317180742|dbj|BAJ58528.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F32]
          Length = 280

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|317013803|gb|ADU81239.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Gambia94/24]
          Length = 280

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 26/289 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  + ++   + +   + ++    + +           L+P   + K+
Sbjct: 16  LAIGKFDGLHLGHQALFKE---LKDPKALLIIEKKHYNKG---------YLTPLKYRAKL 63

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           ++   F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D   L+
Sbjct: 64  VKMPLF-----FVYLEEISQLNALEFLELLKEKFPNLERLVVGYDFRFGHGRQNDALFLK 118

Query: 142 KRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +R EK    T+ + E++  N S  V S  I+ AL+ G +L A  LLG  + +  +VI  +
Sbjct: 119 ERFEK----TIIVPEVKVQNIS--VHSKMIKLALSHGDLLLANKLLGRPYEVCGEVISDQ 172

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    +E 
Sbjct: 173 GLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFAIEC 230

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              D   E   +   + +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 231 HAIDTIIENPPKEIALRWVQKIRDNMRFNSLKELKNQIQQDILMAKEIL 279


>gi|317009005|gb|ADU79585.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori India7]
          Length = 280

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKYYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISRLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +L A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKRIKLALSHGDLLLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPGFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E    D   E   +   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHALDTIIENPPKEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|57241997|ref|ZP_00369937.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis RM3195]
 gi|57017189|gb|EAL53970.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis RM3195]
          Length = 282

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 43/297 (14%)

Query: 22  VAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +AIG FDGIHLGH      L L +A+ + N     +LS     + +  S   IFTL    
Sbjct: 16  LAIGCFDGIHLGHLELIKRLNLNEALLVINKFKGEILSDFKQKQEL--SKRAIFTLEFEE 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I+   L+   F  L+R +F          +F++ ++V          G  F FG ++   
Sbjct: 74  IRH--LKAQDFLHLLRQEF----------KFLEHIVV----------GYDFVFGHNKEAK 111

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +++     G  T  + E + +    V +S I+  L +G V  A   LG +++I++ V
Sbjct: 112 AFDIERLS---GIKTSIVPEFKLDGLS-VHASLIKDFLARGEVKKAERFLGRKYSIKARV 167

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG-- 254
           I G+ +G+   F T N++     L K GVYA   +  ++  +  V+  G   T +     
Sbjct: 168 IRGQGLGKKELFATLNLRNCNYFLPKNGVYASMIKIGEE-RFKSVSFLGVRSTDLTFSIE 226

Query: 255 PLLLESF--IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +LE+F  I  F +E+      + F ++LR    F D++ LK  + +D +K ++IL
Sbjct: 227 THILENFEKIVQFDEEV-----ELFFVEFLRENESFSDLKALKQKISQDIEKTKEIL 278


>gi|332673207|gb|AEE70024.1| riboflavin biosynthesis protein RibF [Helicobacter pylori 83]
          Length = 280

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  TKLVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|322378447|ref|ZP_08052900.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS1]
 gi|322380354|ref|ZP_08054562.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS5]
 gi|321147224|gb|EFX41916.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS5]
 gi|321149138|gb|EFX43585.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS1]
          Length = 286

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 25/293 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           ++IG FDG+H+ H  +L+    +   S + V+      +T ++ +     L+P   ++ +
Sbjct: 16  LSIGKFDGVHVAHQHLLQ---ALGPQSAVLVVD-----KTNLKEA-----LTPLDYRQHL 62

Query: 82  LEKMGFSALIRYKFTLETA-NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           L+K        Y   LE A      +F++ +  ++  ++ ++ G  FRFG  R G+   L
Sbjct: 63  LKKWVDQV---YFLALEEAFLLEPPEFVRLIESKFSCLQKIVVGYDFRFGHKRMGNVDTL 119

Query: 141 QKR-GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           +     K       I E++  K   + + +I+  + KG +  A   LG+ F +E  +I G
Sbjct: 120 KTLLNPKITLEV--IPEIKI-KGISLHAYHIKECIKKGDISLACQFLGHPFMLEGPIISG 176

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + +G    +PT NM ++P++LL   GVYA   +  +  SY    +F  N  +  +G + L
Sbjct: 177 QGLGHQKLYPTLNMAINPEMLLPSFGVYATHVKFLE--SYLPSVSFLGN-RLSTDGKIAL 233

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E+ I + S         V F   +R    F ++  LK  +  D ++A+ IL++
Sbjct: 234 ETHILNTSLSTPPPSMRVFFVQKIRDNALFDNLNSLKHQISLDLQEAKHILKA 286


>gi|317179245|dbj|BAJ57033.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F30]
          Length = 280

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K +    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKFVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELVPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKDQIQQDILRAKEIL 279


>gi|294502569|ref|YP_003566631.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
 gi|294353028|gb|ADE63369.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
          Length = 127

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD
Sbjct: 61  AKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGD 118


>gi|298736697|ref|YP_003729227.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B8]
 gi|298355891|emb|CBI66763.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B8]
          Length = 280

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +   VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGKVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G   +   N    +
Sbjct: 171 DQGLGHKELVPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNRLSTDRN--FAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIEKPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|308184162|ref|YP_003928295.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SJM180]
 gi|308060082|gb|ADO01978.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SJM180]
          Length = 280

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +   VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGKVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|308063221|gb|ADO05108.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Sat464]
          Length = 280

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   +   +     +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPKEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|315636414|ref|ZP_07891658.1| riboflavin kinase/FAD synthase RibF [Arcobacter butzleri JV22]
 gi|315479280|gb|EFU69969.1| riboflavin kinase/FAD synthase RibF [Arcobacter butzleri JV22]
          Length = 283

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 29/281 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+H+ H  + +    +  N  I  +             S    L+P S +++ 
Sbjct: 19  IAIGGFDGMHIAHQELFKN---LGENGAIVSIE------------SGFANLTPKSYRQE- 62

Query: 82  LEKMGFSALIRYKFTLET-ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                +S    Y + L+        +FI+ +  E+ +++ ++ G  F FGK+R+     L
Sbjct: 63  -----YSKYPIYYYVLDNIKKLEGVEFIKLLKEEFPKLEKIVVGYDFCFGKNRSCSTQDL 117

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   E +    + I E++ +    V S  IR  +  G++  A  LLG  + I   +  G+
Sbjct: 118 E---ELFDGEVIIIPEIKVDNIA-VHSRTIREFIKDGNIELANKLLGKEYKIYGFLQKGQ 173

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G T   PT N+ +   +L KEG+Y I     D+  YS V+  G   T   +G   +E+
Sbjct: 174 GLGTTNFVPTINLTIDEFLLPKEGIY-ISKTIVDEIEYSSVSFLGHRAT--TDGNYAVET 230

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            I D + E+      + F   +R   KF   ++LK  + +D
Sbjct: 231 HILDKNIEVNNHNIQIKFIKRVRDNQKFDSFKELKKQILDD 271


>gi|212696543|ref|ZP_03304671.1| hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676479|gb|EEB36086.1| hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 143

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V++GNFDG+H GH  ++++ I+I+    +T  VL F  + + I+       T     I+
Sbjct: 21  AVSLGNFDGVHRGHQKLMKENIEISKEKNLTPSVLLFKENTKNILNGEKEYLTSLEDKIE 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             IL+ +G       +F+ E  N S  +FI+++L + L  K VI G  +RFGK   GD  
Sbjct: 81  --ILKNIGIECFCLLEFSDEFKNLSPYEFIEEILYKKLNTKYVIVGDNYRFGKMAKGDIK 138

Query: 139 ILQK 142
            L+K
Sbjct: 139 TLKK 142


>gi|258611928|ref|ZP_05711719.1| LOW QUALITY PROTEIN: FAD synthetase [Listeria monocytogenes FSL
           R2-503]
 gi|258607223|gb|EEW19831.1| LOW QUALITY PROTEIN: FAD synthetase [Listeria monocytogenes FSL
           R2-503]
          Length = 203

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 47  NSPITVLSFNPHPRTIIQSSSPIF--TLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
           N  +T +SF+PHP   ++    I+   L+P   +E+ L   G   LI   FT   A  + 
Sbjct: 2   NEILTAISFSPHPLWALKQIE-IYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTP 60

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           E+F++  L   L +  ++ G++F FGK R  D  +L+   + Y      +  +  N+++I
Sbjct: 61  EEFVRDHLTN-LNLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQTKI 119

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
            SS+NIR  + +GH   A  LLG+ + I   V +GE  G
Sbjct: 120 -SSTNIRAFIRRGHFQEAEELLGHPWYITGIVENGEMTG 157


>gi|317177174|dbj|BAJ54963.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F16]
          Length = 280

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKIEEIS-VHSKTIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLAKIKDSIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   Q   +     +R  + F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMLFSSLKELKNQIQQDILRAKEIL 279


>gi|34557003|ref|NP_906818.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Wolinella
           succinogenes DSM 1740]
 gi|34482718|emb|CAE09718.1| PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE [Wolinella
           succinogenes]
          Length = 295

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 31/290 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VAIG FDG+HL H                 + S+      I+   +    L+P   + + 
Sbjct: 16  VAIGKFDGMHLAHQ---------------RLFSYLDEGGAILTVDAQRGNLTPGEYKRE- 59

Query: 82  LEKMGFSALIRYKFTL-ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                F+    Y   L +  + S E+FI  +   +  +  V+ G  FRFGK+RA   G+ 
Sbjct: 60  -----FTPFPLYSIPLGKIKHLSGERFIYMLKKAFPNLTKVVVGYDFRFGKNRA--FGVE 112

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           + RG   G   V + E+  ++   V S  IR  + +G +  A  LLG  + IE  V+ G 
Sbjct: 113 ELRGYFAG-EVVVVPEV-FHRGHSVHSEAIRELIAQGEMNLAGELLGRDYFIEGRVVRGN 170

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G +  F T N+++   ++  EGVYA + +  ++  +  V+  G+  ++  +    +E+
Sbjct: 171 GLGSSALFATINLEVESFLIPLEGVYATKTKVGERC-FGSVSFVGKRLSV--DNLFSIET 227

Query: 261 FIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +   S       +   + F + LR   +F ++  LK  + ED  +A +I
Sbjct: 228 HLLGVSPHAIPKTEVARIYFLERLRENRRFAELSSLKAQISEDIGRAEQI 277


>gi|327441745|dbj|BAK18110.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 261

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V+A+G FDG+H GH  ++  A K A  N   + V+SF PHP+T+  S+  +  L P   
Sbjct: 21  AVIALGFFDGVHKGHQEVILAARKKARKNGLKLAVMSFFPHPKTVF-SNEEVDYLMPMEK 79

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +  + +G        FT   A    +QF+Q+ LV  L+V+  + G  + +G   AG  
Sbjct: 80  KAERFQSLGVDLFYIVDFTKLFAALQPKQFVQQYLV-GLQVQYAVAGFDYTYGAKGAGTT 138

Query: 138 GILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             +    +      + +D ++  +   + VSS+ IR  L +G+V     LLG  ++++  
Sbjct: 139 ATIHSDSD----CKIIVDIVKRFSISGKKVSSTCIREKLKRGYVEEVTALLGKPYSVQYS 194

Query: 196 VIHG 199
           + +G
Sbjct: 195 MENG 198


>gi|224418370|ref|ZP_03656376.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|313141900|ref|ZP_07804093.1| bifunctional riboflavin kinase/FAD synthase RibF [Helicobacter
           canadensis MIT 98-5491]
 gi|313130931|gb|EFR48548.1| bifunctional riboflavin kinase/FAD synthase RibF [Helicobacter
           canadensis MIT 98-5491]
          Length = 294

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 46/301 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN-----PHPRTIIQSSSPIFTLSPPS 76
           +A+G FDG+H+ H  I +    + +   I  +  N     P P     +  PI+ L    
Sbjct: 19  IALGKFDGMHIAHQEIFKA---LDHQGVILCIETNRGELLPKPYRDFYTHFPIYHLDLNI 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-EVKTVITGTKFRFGKDRAG 135
           ++EK                      +  +F+ K L+E L  +K ++ G  FRFGKDR  
Sbjct: 76  VKEK----------------------NDIEFV-KFLMEILPNLKRIVVGYDFRFGKDRNY 112

Query: 136 DRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
               L+K  +GE      + IDE+   K   V S  I+  L  G++  A  LLG  F I+
Sbjct: 113 YTFDLKKHFKGE-----VIVIDEVFYKKLS-VHSGLIKELLINGNLKLANKLLGREFEIQ 166

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQTS--YSGVANFGRNPT 249
             +I G+ IGR   + T N++    +L +EGVYA  I+   Q   +  Y  V   G   +
Sbjct: 167 GKIIKGQGIGRKQLYATINLENDGFLLPQEGVYAGFIQLGKQSHITPKYPAVIFIGNRVS 226

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +    +E  +     E+   +    F+  +R    F  +E LK  + +D  +A K+L
Sbjct: 227 T--DKSFAIEGHLLGIELEVQTTKAGFYFYRKIRENEYFDTLEALKEQIKQDINQAYKLL 284

Query: 310 E 310
           +
Sbjct: 285 K 285


>gi|254779054|ref|YP_003057159.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B38]
 gi|254000965|emb|CAX28909.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B38]
          Length = 280

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 30/291 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A  F+  +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKLVGMPLF-----FVYLEEISQLNALDFLDLLKKKFPHLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKIIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G   +   N    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNRLSTDQN--FAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 229 ECHVLDTIIEKPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 279


>gi|317010638|gb|ADU84385.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SouthAfrica7]
          Length = 280

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKEL---------------KDPKALLVIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A  F++ +  ++  ++ ++ G  F+FG  R  D  
Sbjct: 61  AKLVCMPLF-----FVYLEEISRLNALDFLELLKKKFPNLERLVVGYDFKFGYQRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++  ++    ++ + E++  N S  V S  I+ AL+ G +L A  LLG  + +  +VI
Sbjct: 116 FLKEHFKE----SIIVPEVKVQNIS--VHSKMIKLALSHGDLLLANKLLGRYYEVCGEVI 169

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
             + +G     PT N++    IL   GVYA   R +DQ     V+  G    +  +    
Sbjct: 170 SDQGLGHKELVPTLNIKTKDFILPSFGVYASLVRIKDQIYQKSVSFIGNR--LSTDQHFA 227

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   Q+  + + + +R  + F  +++LK  + +D   A++IL
Sbjct: 228 IECHVLDAIIENPPQKLALRWVEKIRDNMHFHSLKELKNQIQQDILIAKEIL 279


>gi|294500342|ref|YP_003564042.1| FAD Synthetase [Bacillus megaterium QM B1551]
 gi|294350279|gb|ADE70608.1| FAD Synthetase [Bacillus megaterium QM B1551]
          Length = 181

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 12/179 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   V+AIG FDG+H GH  ++++A+    A   P  V +F+P PR   QS      L+P
Sbjct: 11  LPASVIAIGAFDGVHQGHQAVIKRAVNRSKALKVPSVVYTFDPPPRFHFQSDQ---VLTP 67

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  ++ ++G    +   F    A   +  FI    ++ L    +I G  FRFG++R 
Sbjct: 68  IDQKVHLIAELGVDYAVIIHFDELYAKRPSIDFISN--LKKLNPSEIIVGNDFRFGRNRE 125

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           GD  +L K      F    I  +  ++   +SS+ IR  L +G +  +  LLG+    E
Sbjct: 126 GDIKLLAKH-----FLVDIIPPVCCSEGTRISSTRIRQLLQQGAIDQSNDLLGWSLQKE 179


>gi|255018914|ref|ZP_05291040.1| hypothetical protein LmonF_16426 [Listeria monocytogenes FSL
           F2-515]
          Length = 136

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIF--TLSP 74
           +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP   ++    I+   L+P
Sbjct: 15  RAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHPLWALKQIE-IYREMLTP 73

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E+ L   G + LI  +FT   A  + E+F+   L   L +  ++ G++F FGK R 
Sbjct: 74  RMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNLSHIVVGSEFNFGKGRD 132

Query: 135 GD 136
            D
Sbjct: 133 SD 134


>gi|320537766|ref|ZP_08037689.1| riboflavin kinase [Treponema phagedenis F0421]
 gi|320145389|gb|EFW37082.1| riboflavin kinase [Treponema phagedenis F0421]
          Length = 276

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 16/245 (6%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F  +  +    P   +G  V+IG FDG H GH L+ E+  + A   N    +++F+ 
Sbjct: 1   MEIFSWDALVKAKAPLITQGAAVSIGGFDGPHRGHVLLFEKVFEAAKKENLKAGLITFSR 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      + +  +S   ++ +  E++GF  ++   F+   A     QF   +L++ + 
Sbjct: 61  SPRFKKAGENYVGDVSTLRLRLQKFEELGFDFIVLIDFSCSFARIEGVQFFD-ILLKTIR 119

Query: 118 VKTVITGTKFRFGKDRAGDRGI--LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           ++ +  GT FR G     D G+  L + G + GF    I +L    +  +SSS +R A+ 
Sbjct: 120 IRYLAVGTDFRCGYRL--DTGVHELIQLGSEQGFRFDSIGQLTAANNLRISSSAVRVAVE 177

Query: 176 KGHVLNAAHLLGYRFTIE-SDVI--HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           K     A  LLGY F ++  DV     +K+            L PD     G Y+++   
Sbjct: 178 KADFTLAKDLLGYPFLLDIKDVFTPDEQKVCSYKAVKQITQILPPD-----GRYSVKVFL 232

Query: 233 QDQTS 237
            D+T+
Sbjct: 233 TDKTT 237


>gi|330941227|gb|EGH44093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 134

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V+
Sbjct: 59  REFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQ 118

Query: 120 TVITGTKFRFGKDRAG 135
            +  G  FRFG DR G
Sbjct: 119 HLEVGDDFRFGFDRVG 134


>gi|7993917|sp|O84990|RIBF_RHOOP RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|3387793|gb|AAC38800.1| putative FAD synthetase [Rhodococcus opacus]
          Length = 248

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 12/182 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VAIG FDG+HLGH  +L            TVL+F+PHP  ++     +  LS    + + 
Sbjct: 22  VAIGAFDGVHLGHRQVLVGCD--------TVLTFDPHPMHVLAPRPALRLLSDRRTKLRK 73

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G   +    F    +  +A+ F+++V+++ L    V  G  FRFG   A   G  +
Sbjct: 74  LEALGIRRVAFIPFDEGWSRVTADDFVERVVIDRLHASRVSVGANFRFG---AHGVGTPE 130

Query: 142 KRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
                    T  +  + R   ++ +SS+ IR  +  G++ +A  LLG  F++ +  +   
Sbjct: 131 TFNNYQSLQTRVVQLVQRGPGAEPISSTRIRKLVAAGNIEDAIDLLGGPFSLPAVAVSES 190

Query: 201 KI 202
           ++
Sbjct: 191 RL 192


>gi|302525657|ref|ZP_07277999.1| predicted protein [Streptomyces sp. AA4]
 gi|302434552|gb|EFL06368.1| predicted protein [Streptomyces sp. AA4]
          Length = 155

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           F +   V  G+K GR LGFPTAN+ L      L +GV+A      D T  +   + GR P
Sbjct: 10  FVVRGPVEPGDKRGRELGFPTANIALRDQRGELGDGVWAGWAERADGTRVAAAVSVGRRP 69

Query: 249 TMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T    +G  L+E+F+ DF  ++YG+R TV    +LR +  F   + L   +G D   AR+
Sbjct: 70  TYYGADGYRLVEAFLLDFEGDLYGERLTVWLGKHLRNQRGFDSSQDLIDALGHDVAAARE 129

Query: 308 ILES 311
            + +
Sbjct: 130 WVAA 133


>gi|109947355|ref|YP_664583.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter acinonychis str. Sheeba]
 gi|109714576|emb|CAJ99584.1| riboflavin kinase / FMN adenylyltransferase [Helicobacter
           acinonychis str. Sheeba]
          Length = 279

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 32/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT---LSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +T   L+P   +
Sbjct: 15  LAIGKFDGLHLGHQALFKEL---------------KDPKALLVIEKEHYTKGYLTPLKYR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K++    F     + +  E +  +A  F++ +  ++  ++ ++ G  F+FG  R  +  
Sbjct: 60  AKLVNMPLF-----FVYLEEISRLNALDFLELLKKKFPNLERLVVGYDFKFGYQRQNNAL 114

Query: 139 ILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            L++  ++    ++ + E++  N S  V S  IR AL  G +  A  LLG  + +  +VI
Sbjct: 115 FLKEHFKE----SIIVPEVKVQNIS--VHSKTIRLALDHGDLSLANKLLGRPYEVCGEVI 168

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+ +G     PT N++    IL   GVYA   + +DQT    V+  G   +   N    
Sbjct: 169 KGQGLGHKELAPTLNLKTKDFILPSFGVYASLVKIKDQTYQRSVSFIGNRLSTDQN--FA 226

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +E  + D   E   +   +   + +R  + F  +++LK  + +D   A++IL
Sbjct: 227 IECHVLDTIIENPPKELALRLVEKIRDNMHFNSLKELKNQIQQDISIAKEIL 278


>gi|262364545|gb|ACY61102.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D182038]
          Length = 186

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++ IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    +
Sbjct: 1   MLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R G
Sbjct: 61  AKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQG 117


>gi|111022375|ref|YP_705347.1| riboflavin biosynthesis protein [Rhodococcus jostii RHA1]
 gi|110821905|gb|ABG97189.1| riboflavin biosynthesis protein [Rhodococcus jostii RHA1]
          Length = 481

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V+HG++ GR LGF TAN++L     + +GV+A R    D ++     + GR PT 
Sbjct: 360 SIVGTVVHGDQRGRELGFRTANLELEDSNSVADGVWAGRCTLPDGSTAIAAISIGRRPTF 419

Query: 251 VP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +G  LLE+ + DF  ++Y     VS   ++R ++ F   E+L   +  D  + R ++
Sbjct: 420 YGRSGVRLLEAHLLDFDGDLYDATLEVSLHQWMRGQVTFASKEELVAALAADVVRTRSLI 479


>gi|315638278|ref|ZP_07893459.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis JV21]
 gi|315481625|gb|EFU72248.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis JV21]
          Length = 282

 Score = 68.9 bits (167), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 39/295 (13%)

Query: 22  VAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +AIG FDGIHLGH      L L  A+ + N      LS     + +  S   IFTL    
Sbjct: 16  LAIGCFDGIHLGHLELIKRLDLNGALLVINKFKGENLSDFKQKQEL--SKRAIFTLEFEK 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I  + L+   F  L+R +F          +F++ ++V          G  F FG ++   
Sbjct: 74  I--RYLKAQDFLHLLRQEF----------KFLEHIVV----------GYDFVFGHNKEAK 111

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +++     G  T  + E + +    V +S I+  L +G V  A   LG +++I++ V
Sbjct: 112 AFDIERLS---GIKTSIVPEFKLDGLS-VHASLIKDFLARGEVKKAERFLGRKYSIKARV 167

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           I G+ +G+   F T N++     L K GVYA   +  ++  +  V+  G   T   +   
Sbjct: 168 IRGQGLGKKELFATLNLRNCNYFLPKNGVYASMIKIGEEC-FKSVSFLGVRST---DLAF 223

Query: 257 LLESFIFDFSQEI--YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E+ I +  ++I    +   + F ++LR    F D++ LK  + +D +K ++IL
Sbjct: 224 SIETHILENFEKIVQLDEEVELFFVEFLRENESFSDLKALKQKISQDIEKTKEIL 278


>gi|237757138|ref|ZP_04585570.1| Riboflavin kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690705|gb|EEP59881.1| Riboflavin kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 159

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IGNFDG+H GH  IL++   IA  NN    V++F PHPR I+       ++   + +
Sbjct: 15  VCTIGNFDGVHKGHKEILDKLKNIASENNLKTVVITFYPHPRKILNPQQYKCSIVNLATK 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L++     ++   F         E F+   L E +  + ++ G  +RFG  R+GD  
Sbjct: 75  VQLLKEAKIDYILVVDFDKNFYEKQPEDFLN-FLKEKINCEYLVVGKDWRFGYKRSGDIN 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQI 164
           + +   EK  +  V I+++     +I
Sbjct: 134 LAKSLEEKLDYKVVIIEDITEENKRI 159


>gi|331702267|ref|YP_004399226.1| cytidyltransferase-like domain-containing protein [Lactobacillus
           buchneri NRRL B-30929]
 gi|329129610|gb|AEB74163.1| cytidyltransferase-related domain protein [Lactobacillus buchneri
           NRRL B-30929]
          Length = 276

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 13/219 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  ++  A KIA+     + V++FN H   +   S         +++
Sbjct: 22  VLALGFFDGVHKGHQKVIATARKIASQKGYQLAVMTFNRHASRVFNHSQTASFRYLTTLK 81

Query: 79  EKILEKMGFSALIRY--KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +KI       A I Y   FT + A  S + F+ + ++  L  K V+ G  + FG+     
Sbjct: 82  QKIELVRATHADILYVIDFTKQFAALSPKHFVDQYVIG-LNAKVVVAGFDYTFGRGGTTT 140

Query: 137 RGILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              L K  G K    TV ++EL +++ +I SS+ IR  +   ++  A  LLG+ +     
Sbjct: 141 IDSLAKISGGK--VKTVTVNELASDQLKI-SSTRIRHLVRDSNIQEATRLLGHPYETTGK 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +IH +  G ++  P++ +Q  P+     G Y    R  D
Sbjct: 198 LIHAQTNGLSIVNPSSRLQQLPE----SGRYLCEVRVAD 232


>gi|228997180|ref|ZP_04156805.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock3-17]
 gi|229004841|ref|ZP_04162571.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock1-4]
 gi|228756394|gb|EEM05709.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock1-4]
 gi|228762574|gb|EEM11496.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock3-17]
          Length = 182

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 17/183 (9%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           + S+P  L+  +V+IG FDG+H GH  ++  A++       P  V +F+P PR+  Q + 
Sbjct: 8   DYSVPE-LEKSIVSIGAFDGVHKGHQTVIRNAVEKGKELQIPNVVYTFDPPPRSYFQGAQ 66

Query: 68  PIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
               L+P  I EK+   +++G   +I  +F        A  FIQ+  ++ L    +  G 
Sbjct: 67  ---VLTP--INEKLNRFQELGVEHVIVIRFDELYVTRRASYFIQE--LQRLCPIEIYVGE 119

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFGK+R GD  +L K      F    ++E+   + + +SS+ IR  L +G +  +  L
Sbjct: 120 DFRFGKNREGDIELLMKY-----FDVSIVEEVCCEEGERISSTRIRNHLFQGELQRSQSL 174

Query: 186 LGY 188
           LG+
Sbjct: 175 LGW 177


>gi|307718801|ref|YP_003874333.1| riboflavin biosynthesis protein RibF [Spirochaeta thermophila DSM
           6192]
 gi|306532526|gb|ADN02060.1| riboflavin biosynthesis protein RibF [Spirochaeta thermophila DSM
           6192]
          Length = 263

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 111/222 (50%), Gaps = 16/222 (7%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           SLP + +   V IG FDG+HLGH  +LE  +  + +    V++F+ +P  +         
Sbjct: 15  SLPRNPEDSAVTIGVFDGVHLGHQELLETLLSSSLHP--LVITFDKNPEELFSPDKRYER 72

Query: 72  LSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           L+  S+++K+  + +MG   ++   F+ + +     +F+++V ++   +K ++ G  FR 
Sbjct: 73  LT--SLRQKVSRIREMGIPDVLVIDFSRDFSTIEGREFLERV-IDVTRMKRLLVGKDFRC 129

Query: 130 GKDRAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           G  R G  GI +      + G   V ++++  N ++ VSS+ IR  + +G +  A  +LG
Sbjct: 130 G--RGGAVGIAEAEELCARRGVELVVMEDVTQNGTR-VSSTEIRKRILEGELDAAEQMLG 186

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
              T++   + GE  G TL  P   +   P IL   G YA R
Sbjct: 187 RPHTLDLRGLVGEGRG-TLCIPRWKI---PQILPPPGEYAGR 224


>gi|228991099|ref|ZP_04151059.1| Riboflavin biosynthesis protein [Bacillus pseudomycoides DSM 12442]
 gi|228768635|gb|EEM17238.1| Riboflavin biosynthesis protein [Bacillus pseudomycoides DSM 12442]
          Length = 182

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 17/183 (9%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           + S+P  L+  +V+IG FDG+H GH  ++  A++       P  V +F+P PR+  Q + 
Sbjct: 8   DYSVPE-LEKSIVSIGAFDGVHKGHQTVIRNAVEKGKELQIPNVVYTFDPSPRSYFQGAQ 66

Query: 68  PIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
               L+P  I EK+   +++G   +I  +F        A  FIQ+  ++ L    +  G 
Sbjct: 67  ---VLTP--INEKLNRFQELGVEHVIVIRFDELYVTRRASYFIQE--LQRLCPIEIYVGE 119

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFGK+R GD  +L K      F    ++E+   + + +SS+ IR  L +G +     L
Sbjct: 120 DFRFGKNREGDIELLMKY-----FDVSIVEEVCCEEGERISSTRIRNHLFQGELQRPQPL 174

Query: 186 LGY 188
           LG+
Sbjct: 175 LGW 177


>gi|16079982|ref|NP_390808.1| RNA-binding riboflavin kinase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310874|ref|ZP_03592721.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315199|ref|ZP_03597004.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320117|ref|ZP_03601411.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221324399|ref|ZP_03605693.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|2829804|sp|P94465|RIBR_BACSU RecName: Full=Regulatory protein ribR
 gi|1707406|emb|CAA70887.1| regulatory protein [Bacillus subtilis]
 gi|2293255|gb|AAC00333.1| RibR [Bacillus subtilis]
 gi|2635395|emb|CAB14890.1| RNA-binding riboflavin kinase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+ G+++GR LGFPTAN+       L+ GVY +   T +   + GV N G  PT+ 
Sbjct: 4   IAGTVVKGKQLGRKLGFPTANVDAKIH-GLRNGVYGV-LATVNHQFHLGVMNIGVKPTVG 61

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N    LE F+FDF ++IYG++   S    +R E +F  +E L   + +D
Sbjct: 62  SNLEKTLEIFLFDFHRDIYGEKIECSILFKIREERRFDSLESLTKQIKKD 111


>gi|88854362|ref|ZP_01129029.1| riboflavin biosynthesis protein RibF (riboflavin kinase) [marine
           actinobacterium PHSC20C1]
 gi|88816170|gb|EAR26025.1| riboflavin biosynthesis protein RibF (riboflavin kinase) [marine
           actinobacterium PHSC20C1]
          Length = 147

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 173 ALTKGHVLNAAHLLGYR--FTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIR 229
           AL  G +    H + +    T    V+HG+K GR LGFPTAN+++ SP++L  +GVYA  
Sbjct: 6   ALLTGPITEWGHPMEHSPSATFRGTVVHGDKRGRELGFPTANIEVGSPELLPGDGVYACW 65

Query: 230 FR-TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                    Y    + G NPT        +E++I DF  ++YG    V+   +LR  ++ 
Sbjct: 66  VSFPPAGLQYGATVSIGANPTFDDVVDRRVEAYIHDFDADLYGSDIKVTVHAWLRAMVRC 125

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +++L      D   +R  L
Sbjct: 126 DSLQELIDKTAADVAASRIAL 146


>gi|321312466|ref|YP_004204753.1| RNA-binding riboflavin kinase [Bacillus subtilis BSn5]
 gi|320018740|gb|ADV93726.1| RNA-binding riboflavin kinase [Bacillus subtilis BSn5]
          Length = 230

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I   V+ G+++GR LGFPTAN+       L+ GVY +   T +   + GV N G  PT+ 
Sbjct: 4   IAGTVVKGKQLGRKLGFPTANVDAKMH-GLRNGVYGV-LATVNHQFHLGVMNIGVKPTVG 61

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N    LE F+FDF ++IYG++   S    +R E +F  +E L   + +D
Sbjct: 62  SNLEKTLEIFLFDFHRDIYGEKIECSILFKIREERRFDALESLTKQIKKD 111


>gi|330836566|ref|YP_004411207.1| FAD synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748469|gb|AEC01825.1| FAD synthetase [Spirochaeta coccoides DSM 17374]
          Length = 298

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 12/225 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI-----TVLSFNPHPRTIIQSSSPIFTLSPP 75
           V+AIG FDGIHLGH LIL++ + +A+          V++FN +P+    S +    L   
Sbjct: 34  VIAIGVFDGIHLGHQLILKECVSLAHEHTADSWQSMVITFNRNPKMTHGSKNNQLPLITA 93

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK-DRA 134
            ++ ++         +   F+ E +  S E+F+  ++  +  V+ V+ G  FR G  D++
Sbjct: 94  RLEHEMFVSFDLDHHVIIDFSDEISKLSGEEFL-GLVCGFCSVRAVVVGEDFRCGAPDKS 152

Query: 135 GDRGILQKRGEKY--GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
                LQ+  ++   G   +     R     + SSS IR  L  G++     LLG  +++
Sbjct: 153 AGPVQLQEYLQRMSPGGQVIVPPFYRTEDGLVASSSRIRALLLDGNIPGIKPLLGRDYSV 212

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +            L +  +++     +L   G+Y   FR  D T+
Sbjct: 213 DLAPYPFTTQAGCLRYRVSSIA---QLLPPAGMYETVFRCLDGTA 254


>gi|325971220|ref|YP_004247411.1| FAD synthetase [Spirochaeta sp. Buddy]
 gi|324026458|gb|ADY13217.1| FAD synthetase [Spirochaeta sp. Buddy]
          Length = 278

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 11/236 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  I+ + +++A    +   V++F+ +P+ I++S      L+  S  E
Sbjct: 22  VCIGVFDGLHSGHQAIIRRCVELAAQQGLESMVITFDKNPKMIMKSQPYHSKLASESQIE 81

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK--DRAGDR 137
           +IL  +G   L+   F+ + +  +AE+F+  ++  +  V  ++ G  FR G     AG  
Sbjct: 82  QILVNIGVDHLVVIDFSADFSKLTAEEFL-TLVCAFCHVNVMVVGEDFRCGAPVSSAGPV 140

Query: 138 GILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
            + +         TV I   +     +I SS+ +R  L +G +     +LG  + ++   
Sbjct: 141 QLQEYLSRLSPEATVEIPPFVLTADGEITSSTLVRKKLLEGALEEVQSMLGRPYELDLVA 200

Query: 197 IHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
              + + + L + TA+ MQL P +    GVY  +    D +     A+ G +  ++
Sbjct: 201 YPSKFMEKGLLYRTASFMQLLPPV----GVYEAQLSLSDGSVVDVHAHLGEDELLI 252


>gi|303233365|ref|ZP_07320034.1| riboflavin kinase [Atopobium vaginae PB189-T1-4]
 gi|302480494|gb|EFL43585.1| riboflavin kinase [Atopobium vaginae PB189-T1-4]
          Length = 468

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 13/143 (9%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KE 223
           +SS+ IR  +  GHVL AA  L   + +E  V+HG   G ++GF TAN+   PD+ +   
Sbjct: 306 ISSTYIRKLIANGHVLCAARALTRPYCLEGTVMHGRGKGASMGFATANILTRPDVCVPAA 365

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL-----------LLESFIFDFSQEIYGQ 272
           GVYA  F   D   Y    N G   +                   LE+ + DF   +YG+
Sbjct: 366 GVYA-GFVLADGVLYPAAINMGLPESFSSQAYCALHASNVAHRGFLEAHLIDFDGNLYGR 424

Query: 273 RCTVSFFDYLRPEIKFKDIEKLK 295
             +V    Y+R E  F   ++L 
Sbjct: 425 VVSVMVIAYIRSEQHFSSTDELS 447



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 22/152 (14%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS--------PI 69
            VV+IG +DG H GH  ++ +  + A     P  V++FNP P  ++++++        P 
Sbjct: 76  AVVSIGVYDGFHKGHQALIRETKRAAQARRLPSCVITFNPDPADVLRTAACTSDGTHLPS 135

Query: 70  FTLSPPSIQEKILEKMGFSALIRY------------KFTLETANYSAEQFIQKVLVEWLE 117
            T +  ++  +    M  +A + Y             FT + A  S E F   V  +   
Sbjct: 136 ATEAASAVAVEHTHLMSLAARLEYVARTQVDFIIVIPFTWDFARLSYEDFFSFVQTKLAF 195

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
              +  G+ FR G   AG    L + G+  G 
Sbjct: 196 PCELHVGSNFRLGYKGAGTIAALSEYGKTIGM 227


>gi|295705688|ref|YP_003598763.1| FAD Synthetase [Bacillus megaterium DSM 319]
 gi|294803347|gb|ADF40413.1| FAD Synthetase [Bacillus megaterium DSM 319]
          Length = 181

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 16/181 (8%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   V+AIG FDG+H GH  +++QA+    A   P  V +F+P PR   Q    + T   
Sbjct: 11  LPASVIAIGAFDGVHQGHQAVIKQAVTRSKALKVPSVVYTFDPPPRFHFQQDQ-VLT--- 66

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
            SI +K+  + ++G    +   F    A   +  FI    ++ L    +I G  FRFG++
Sbjct: 67  -SIDQKVNLIAELGVDYAVIIHFDELYAKRPSIDFISN--LKKLNPSEIIVGNDFRFGRN 123

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD  +L K      F    I  +   +   +SS+ IR  + +G +  +  LLG+    
Sbjct: 124 REGDIKLLAKH-----FLVDIIPPVCCAEGTRISSTRIRQLIQQGAIDQSNDLLGWSLQK 178

Query: 193 E 193
           E
Sbjct: 179 E 179


>gi|32266017|ref|NP_860049.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter hepaticus ATCC 51449]
 gi|32262066|gb|AAP77115.1| riboflavin kinase/FAD synthase RibF [Helicobacter hepaticus ATCC
           51449]
          Length = 286

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 27/291 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +A+G FDG+HL H  + +   K                   I+       L+P       
Sbjct: 16  LALGKFDGMHLAHKELFKHLDKKG-------------ALLCIEGKFDDMCLTPSK----- 57

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            E+    ALI   F  E +++S E+FI  +  ++  +K ++ G  F FGK+RA     L 
Sbjct: 58  -EQYSPCALIYVAFE-EISHWSGEKFITILKEKFPSLKRLVVGYDFHFGKNRAFSASDL- 114

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                +    V + E R N    V SS I+  +  G +  A  +LG  + ++  +I G+ 
Sbjct: 115 --CHLFAGEVVIMPEYRINGVG-VHSSLIKEFIRYGDMDMAVAMLGRYYHLQGTIIKGQN 171

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G    +PT N+Q    ++ +EGVYA  F   ++     V   G    +  +    +ES 
Sbjct: 172 LGSKRLYPTINIQTRGYVIPQEGVYA-SFTKVNEKIMPSVCFVGHR--LSTDRHFSIESH 228

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           I D          ++ F   +R    F D+  LK  + +D   ++ IL ++
Sbjct: 229 ILDKEIVCESDMASICFVRKIRDNQSFSDLNLLKERITQDIITSKVILSAA 279


>gi|157364234|ref|YP_001471001.1| cytidyltransferase-like protein [Thermotoga lettingae TMO]
 gi|157314838|gb|ABV33937.1| cytidyltransferase-related domain [Thermotoga lettingae TMO]
          Length = 247

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 45/264 (17%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP- 75
           +K   V +G FDG+HLGH  +L++  +I+    IT               S ++ +S P 
Sbjct: 1   MKKSAVTVGVFDGVHLGHQRLLKRVQQISEEYKIT---------------STVYVVSYPF 45

Query: 76  ------------SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                        I  ++ E   F+  I     LE  +  AE F ++ L +    + ++ 
Sbjct: 46  DFFDENFEGLIMPISSRVAEISRFAQYIEVLDLLEIKDMPAEDFFKEYLSD---AEFLVV 102

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F+FGK+  GD  +L++   + G       ++ + K   +SSS +R  +  G + N +
Sbjct: 103 GEDFKFGKNATGDIALLRRLCSQNGTKLEIFSDITDLKGNRISSSLLRKLIQHGDIDNVS 162

Query: 184 HLLG----YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            LLG      F IES   + +K+   L    A+ ++   +L KEGV+ +    ++    +
Sbjct: 163 KLLGRDYLLEFVIESIDENSDKMHCYL---KADEKI---VLPKEGVFEV---FEELFGIT 213

Query: 240 GVANFGRNPTM-VPNGPLLLESFI 262
           G   FG+      P  PL + S +
Sbjct: 214 GRVQFGKKIIFTAPKTPLAVGSMM 237


>gi|237752360|ref|ZP_04582840.1| riboflavin kinase/FAD synthetase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375849|gb|EEO25940.1| riboflavin kinase/FAD synthetase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 288

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 44/300 (14%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLS-----FNPHPRTIIQSSSPIFTLSPPS 76
           +A+G FDG+HLGH  + ++   +  N  I  +        P       +  P+F ++   
Sbjct: 20  LALGKFDGLHLGHQALFKE---LDENGAILCIEQENGVLLPKKYRSFYAKYPMFYIALDI 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR-AG 135
           I+ K                   ++     F+Q VL     ++ ++ G  FRFGKDR   
Sbjct: 77  IRNK-------------------SDKEFVAFLQSVLPN---LRRIVVGYDFRFGKDRFYY 114

Query: 136 DRGILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              +LQ  +GE      V ++E+   K   V S  I+  L  G+V  A+  LG  + I  
Sbjct: 115 PFDLLQSFKGE-----VVVVNEVLCKKLS-VHSGLIKELLLNGNVKQASKFLGRLYEIRG 168

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQ--DQTSYSGVANFGRNPTM 250
           ++I G+ +G+   + T N+Q    +L +EGVYA  I+   Q  +   Y  V   G    +
Sbjct: 169 EIIKGQGLGKRELYATINLQNDGFLLPQEGVYAGFIQLGEQKLESKKYPAVIFIGNR--L 226

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +    +E  +     E+        F   +R   KF ++E LK  +  D  +A KIL+
Sbjct: 227 STDKSFSIEGHLLGIEVEVKESEAGFYFAKKIRNNRKFDNLESLKKQISCDINEAYKILK 286


>gi|300784421|ref|YP_003764712.1| riboflavin kinase/FAD synthetase [Amycolatopsis mediterranei U32]
 gi|299793935|gb|ADJ44310.1| riboflavin kinase/FAD synthetase [Amycolatopsis mediterranei U32]
          Length = 150

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           F +   V  G+K GR LGFPTAN+ L   D  L +GV+A      D        + GR P
Sbjct: 5   FVVRGTVESGDKRGRELGFPTANIALRDQDGSLGDGVWAGWIGRADGARLPAAISVGRRP 64

Query: 249 TMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           T    +G  LLE+ + DFS ++YG+   V    +LR + K+   E L
Sbjct: 65  TYYGADGYRLLEAHVLDFSGDLYGETLVVWLGSHLRQQEKYASAEDL 111


>gi|302542819|ref|ZP_07295161.1| LOW QUALITY PROTEIN: riboflavin biosynthesis protein RibF
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460437|gb|EFL23530.1| LOW QUALITY PROTEIN: riboflavin biosynthesis protein RibF
           [Streptomyces himastatinicus ATCC 53653]
          Length = 131

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KE 223
           VSS+ +R  + +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +
Sbjct: 1   VSSTLVRRLVAEGDVAGAMEVLGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPAD 60

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
           GVYA  + T +  S     + G NP         +E++  D    ++YG    V F  +L
Sbjct: 61  GVYA-GWLTAEGESMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAFL 118

Query: 283 RPEIKFKDIEKL 294
           R + KF  IE L
Sbjct: 119 RGQEKFDSIEAL 130


>gi|241766698|ref|ZP_04764538.1| Riboflavin kinase [Acidovorax delafieldii 2AN]
 gi|241362966|gb|EER58655.1| Riboflavin kinase [Acidovorax delafieldii 2AN]
          Length = 167

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 26/166 (15%)

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTA---------NMQLSPDILLKEGVYAIRFRT 232
           AA LLG  +TI   V+HG K+GR LG  TA         N++ +       G++A+    
Sbjct: 2   AARLLGRPYTISGHVVHGRKLGRALGASTADAADGFRTLNLRFAHWKPAASGIFAVLVHG 61

Query: 233 QDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLR 283
               +  GVAN G  P++ P     G +LLE+    +  ++     YG+   V     L 
Sbjct: 62  LGDGALPGVANLGVRPSLDPADVNGGRVLLETHCLTWPADLGPEGAYGKIIRVELLHKLH 121

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE--------RDRI 321
            E+K+  ++ L   + +D   AR    S++  S         RDRI
Sbjct: 122 DELKYDGLDALTAGIAKDCADARAYFASAHTSSHTETRRQTTRDRI 167


>gi|315453534|ref|YP_004073804.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           felis ATCC 49179]
 gi|315132586|emb|CBY83214.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           felis ATCC 49179]
          Length = 291

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 27/292 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HL H  +L      A    + V  F P P+           L+P  ++E+ 
Sbjct: 16  LAIGKFDGVHLAHQRLLSALYPQAGV--LVVDRFEP-PKA----------LTP--LRERA 60

Query: 82  LEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                ++  + Y   LE A + SA  FI  +  ++  ++ ++ G  F+  + R+   GI 
Sbjct: 61  CLLASYAQNL-YFLPLEQARHISARDFIALLTQKFPRLQKIVVGYDFKCAQGRS--MGIE 117

Query: 141 QKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           + R       H   I E++  K   + S +I+T + +G VL A   LG  F ++  VI G
Sbjct: 118 ELRAMLSPQIHLEVITEIKI-KGISLHSYHIKTCIERGDVLLARKFLGRPFALQGVVIPG 176

Query: 200 EKIGRTLGFPTANM---QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + +G    +PT N+    L   +L   GVYA      DQ     V+  G    +  +G +
Sbjct: 177 QHLGHEHLYPTLNINTHSLQTQLLPCAGVYATDVLL-DQKRVRAVSFLGHR--LSTDGQM 233

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             E+ I D           V F   +R    F  + +LK  + +D  +AR +
Sbjct: 234 AFETHILDQEITTPPPSLRVLFLKKIRDNRHFTHLAELKAQISQDIAQARAL 285


>gi|315185934|gb|EFU19698.1| cytidyltransferase-related domain protein [Spirochaeta thermophila
           DSM 6578]
          Length = 263

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 16/222 (7%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           SLP + +   V IG FDG+HLGH  +LE  +  + +    V++F+ +P  +         
Sbjct: 15  SLPRYPEDSAVTIGVFDGVHLGHRELLETLLSSSLHP--LVITFDKNPEELFSPDKRYER 72

Query: 72  LSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           L+  S+++K+  + + G   ++   F+ + +     +F+++V ++   +K ++ G  FR 
Sbjct: 73  LT--SLRQKVSRIRETGIPDVLVIDFSRDFSTIEGREFLERV-IDVTRMKRLLVGKDFRC 129

Query: 130 GKDRAGDRGILQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           G  R G  GI +      + G   V ++++  N ++ VSS+ IR  + +G +  A  +LG
Sbjct: 130 G--RGGAVGIAEAEELCTRRGVELVVMEDVTQNGTR-VSSTEIRKRILEGELDAAERMLG 186

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
              T++   + GE  G TL  P   +   P IL   G Y  R
Sbjct: 187 RPHTLDLRGLAGEGRG-TLCIPRWKI---PQILPPPGEYPGR 224


>gi|255552551|ref|XP_002517319.1| protein-s isoprenylcysteine O-methyltransferase, putative [Ricinus
           communis]
 gi|223543582|gb|EEF45112.1| protein-s isoprenylcysteine O-methyltransferase, putative [Ricinus
           communis]
          Length = 294

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 32/195 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS----FNPHPRTIIQSSSPIFTL 72
           L GG+VA+G FD +H+GH  +  QA K+     ++ +     F   PR  I +       
Sbjct: 19  LAGGIVALGKFDALHIGHRELAIQASKVGTPYLLSFVGMAEVFGWEPRAPIVAKCD---- 74

Query: 73  SPPSIQEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKF 127
                + ++L         +   +F ++ ++    + +QF++K+  E L V  V+ G  +
Sbjct: 75  -----RNRVLASWAQYCDNITPLEFQIQFSSVRHLNPQQFVEKLSKE-LRVCGVVAGENY 128

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTAL 174
           RFG   AGD   L +  E+YG     I+ + +NK                VSS+ +R AL
Sbjct: 129 RFGYKAAGDASDLVRLCEEYGLGAYIINSVMDNKKDPINSNSRDSKDRGQVSSTRVRQAL 188

Query: 175 TKGHVLNAAHLLGYR 189
             G +   + LLG R
Sbjct: 189 ALGDMKYVSKLLGRR 203


>gi|313634307|gb|EFS00918.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri FSL N1-067]
          Length = 192

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   +E+ L   G   LI   FT   A  + EQF+   L   L +  ++ G++F FGK
Sbjct: 18  LTPRMEKERWLAHFGVDYLIETAFTPRYAETTPEQFVTNHLSN-LNLSHIVVGSEFNFGK 76

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R  D  +L+     Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ + 
Sbjct: 77  GRDSDVELLRDLCAPYNIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPWY 135

Query: 192 IESDVIHGEKI 202
           I   V +GE I
Sbjct: 136 ISGMVENGEMI 146


>gi|255023602|ref|ZP_05295588.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes FSL J1-208]
          Length = 190

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 2/131 (1%)

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +  ++ G++F FGK
Sbjct: 16  LTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVKDHLTN-LNLSHIVVGSEFNFGK 74

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R  D  +L+   + Y      +  +  N+++I SS+NIR  +  GH   A  LLG+ + 
Sbjct: 75  GRDSDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRCGHFQEAEELLGHPWY 133

Query: 192 IESDVIHGEKI 202
           I   V +GE I
Sbjct: 134 ITGTVKNGEMI 144


>gi|208434309|ref|YP_002265975.1| FMN adenylyltransferase [Helicobacter pylori G27]
 gi|208432238|gb|ACI27109.1| FMN adenylyltransferase [Helicobacter pylori G27]
          Length = 257

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 98  ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157
           E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D   L++R EK    T+ + E+
Sbjct: 52  EISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEK----TIIVPEV 107

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP 217
           +  +   V S  I+ AL+ G +  A  LLG  + +  +VI  + +G     PT N++   
Sbjct: 108 KIQEIS-VHSKTIKLALSHGDLSLANKLLGRPYEVCGEVISDQGLGHKELVPTLNIKTKD 166

Query: 218 DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
            IL   GVYA   R +D      V+  G   +   N    +E  + D   E   +   + 
Sbjct: 167 FILPSFGVYASLVRIKDPIYQKSVSFIGNRLSTDHN--FAIECHVLDTIIENPPKEIALR 224

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   +R  ++F  +++LK  + +D   A++IL
Sbjct: 225 WVQKIRDNMRFNSLKELKNQIQQDILIAKEIL 256


>gi|313638976|gb|EFS03991.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri FSL S4-171]
          Length = 185

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 2/131 (1%)

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   +E+ L   G + LI   FT + A  + EQF++  L + L +  +I G++F FGK
Sbjct: 11  LTPRMEKERWLAHFGVNHLIETAFTPKYAETTPEQFVESHLSQ-LNLSHIIVGSEFNFGK 69

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R  D  +L+     Y      +  +  N+++I SS+NIR  + +G+   A  LLG+ + 
Sbjct: 70  GRDSDVELLRDLCVPYNIGVTSVPVIETNQTKI-SSTNIRAFIRRGYFQEAEELLGHPWY 128

Query: 192 IESDVIHGEKI 202
           I   V +GE I
Sbjct: 129 ITGMVENGEMI 139


>gi|241765399|ref|ZP_04763371.1| FMN adenylyltransferase [Acidovorax delafieldii 2AN]
 gi|241364876|gb|EER59835.1| FMN adenylyltransferase [Acidovorax delafieldii 2AN]
          Length = 134

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P   +   + IGNFDG+H GH  +L      A +  +   VL+F PHPR           
Sbjct: 10  PGIARACALTIGNFDGVHRGHQAMLALLSSEAAHRGVDSCVLTFEPHPRDYFAGVHRKPE 69

Query: 72  LSPPSI---QEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           L+P  I   ++K+  L++ G    +   F    A  S + FI +VLV  L  + V+ G  
Sbjct: 70  LAPARIGTLRDKLTELQRCGVQQTVVLPFDARLAAQSPQAFIDEVLVRGLGARYVLVGDD 129

Query: 127 FRFG 130
           FRFG
Sbjct: 130 FRFG 133


>gi|253827689|ref|ZP_04870574.1| riboflavin biosynthesis protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511095|gb|EES89754.1| riboflavin biosynthesis protein [Helicobacter canadensis MIT
           98-5491]
          Length = 268

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)

Query: 110 KVLVEWL-EVKTVITGTKFRFGKDRAGDRGILQK--RGEKYGFHTVFIDELRNNKSQIVS 166
           K L+E L  +K ++ G  FRFGKDR      L+K  +GE      + IDE+   K   V 
Sbjct: 60  KFLMEILPNLKRIVVGYDFRFGKDRNYYTFDLKKHFKGE-----VIVIDEVFYKKLS-VH 113

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S  I+  L  G++  A  LLG  F I+  +I G+ IGR   + T N++    +L +EGVY
Sbjct: 114 SGLIKELLINGNLKLANKLLGREFEIQGKIIKGQGIGRKQLYATINLENDGFLLPQEGVY 173

Query: 227 A--IRFRTQDQTS--YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
           A  I+   Q   +  Y  V   G   +   +    +E  +     E+   +    F+  +
Sbjct: 174 AGFIQLGKQSHITPKYPAVIFIGNRVST--DKSFAIEGHLLGIELEVQTTKAGFYFYRKI 231

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           R    F  +E LK  + +D  +A K+L+
Sbjct: 232 RENEYFDTLEALKEQIKQDINQAYKLLK 259


>gi|126731664|ref|ZP_01747469.1| riboflavin biosynthesis protein, truncated [Sagittula stellata
           E-37]
 gi|126707830|gb|EBA06891.1| riboflavin biosynthesis protein, truncated [Sagittula stellata
           E-37]
          Length = 204

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 16/175 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           L   V+AIG FDG+H GH  ++  A+  A  +     V +F+P P+ +   ++    L P
Sbjct: 18  LPACVMAIGAFDGVHRGHQALIRGAVAEARAAQTASVVWTFDPPPKVVFGRAA---QLCP 74

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             ++EK+  + ++G   ++  +F    A  SA++F+    +  L  +T+  G  FRFG  
Sbjct: 75  --LEEKLARIARLGPDMIVVARFDRLYAGRSADRFLSD--LARLNPRTIHVGADFRFGHR 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           ++GD  +L      + F       +     + VSS+ IR     G +  A  L G
Sbjct: 131 QSGDTALL-----SHHFKVNIAQPVICAAGETVSSTRIRALRASGRLTEARALQG 180


>gi|217031585|ref|ZP_03437090.1| hypothetical protein HPB128_21g143 [Helicobacter pylori B128]
 gi|216946785|gb|EEC25381.1| hypothetical protein HPB128_21g143 [Helicobacter pylori B128]
          Length = 215

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 98  ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157
           E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D   L++R EK    T+ + E+
Sbjct: 10  EISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEK----TIIVPEV 65

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP 217
           +  K   V S  I+ AL+ G +  A  LLG  + +   VI  + +G     PT N++   
Sbjct: 66  KI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGKVISDQGLGHKELVPTLNIKTKD 124

Query: 218 DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
            IL   GVYA   + +D      V+  G   +   N    +E  + D   E   +   + 
Sbjct: 125 FILPSFGVYASLVKIKDPIYQKSVSFIGNRLSTDRN--FAIECHVLDTIIEKPPKEIALR 182

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +   +R  ++F  +++LK  + +D  +A++IL
Sbjct: 183 WVQKIRDNMRFSSLKELKNQIQQDILRAKEIL 214


>gi|291276797|ref|YP_003516569.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           mustelae 12198]
 gi|290963991|emb|CBG39830.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           mustelae 12198]
          Length = 281

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 27/290 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  +L++   + +   + +++ NP  ++    +    +     I++K+
Sbjct: 15  LAIGKFDGVHLGHQRLLQE---LGSFGGVLIITQNPQKKS--DGALSNLSWRQTWIKQKV 69

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
              + F A+           +S E+F+  +   + ++K ++ G  F FG+ R      L 
Sbjct: 70  F-FLEFEAI---------KEWSGEEFLCFLKEHFKKLKKLVVGYDFCFGRARQYTSRDL- 118

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                +    V + E+   K   V +  I+  L  G +  A  LLG  + I+  VI G+ 
Sbjct: 119 --CHLFDGDVVIVPEVIE-KGIPVHTQKIKELLLLGELSLANLLLGRDYQIQGAVIKGQG 175

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF-GRNPTMVPNGPLLLES 260
           +GR   +PT N+++   ++ K+GVYA     QD       A F G   T   +G   +E 
Sbjct: 176 LGRKSLYPTFNLRVQNYVIPKDGVYA--GYVQDGEDRIACAIFVGVRST---DGAFSIEV 230

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + +  +E +G   T+ F + +R  + F +++ LK  + +D +  + IL+
Sbjct: 231 HLLEKFRE-FGH-MTLQFRERIRDNLSFANLKDLKKQITQDLQNIKNILK 278


>gi|149194566|ref|ZP_01871662.1| hypothetical protein CMTB2_00944 [Caminibacter mediatlanticus TB-2]
 gi|149135310|gb|EDM23790.1| hypothetical protein CMTB2_00944 [Caminibacter mediatlanticus TB-2]
          Length = 252

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 49/278 (17%)

Query: 22  VAIGNFDGIHLGHHLILEQA---IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           + IG FDG+H+GH  ++ +A   + I  NS +T     P    I          SP  + 
Sbjct: 3   ITIGGFDGMHIGHMKLIRKADAYLVIEKNSNLT-----PGFDRI--------YYSPTLLD 49

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LEK+               N SA +FI+  +++    + +I G  FRFGK+R+GD  
Sbjct: 50  ILYLEKI--------------KNLSAIEFIE--ILKKYNAQKIIVGDDFRFGKNRSGDIE 93

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K  E    H + I+ +       + S  IR  +  G +  A   LG+ + I+   I 
Sbjct: 94  LLKKFFEVEVIHEIKINNIG------IHSHYIRILIKNGEIKKANKFLGHIYKIKGIKIK 147

Query: 199 GEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+ +G    FPT N+    +  L K GVY  +       ++ G  +  +N ++  +   +
Sbjct: 148 GQGLGSKELFPTINITPFKNYFLPKAGVYITKTNGYQSITFIGTRSTDKNFSIETH---I 204

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           LE    DF    + +   + F ++LR  I F+ + +LK
Sbjct: 205 LE----DFEDNSFFE---IEFLEFLRENIYFRSLNQLK 235


>gi|168051019|ref|XP_001777954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670714|gb|EDQ57278.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 335

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 29/194 (14%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFT-LSPPSIQEKI 81
           +G FD +H+GH  + E A +I   +P  V SF      +  +   P+        +    
Sbjct: 69  LGKFDALHVGHRALAEHAAEIG--APFLV-SFAGMAEVLGWEVRLPVVARCDRARVMSLW 125

Query: 82  LEKMGFSALIRYKFTLE---TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            E  G   ++  ++ LE     + S EQF++K+  E L+VK V+ G  +RFG   AGD  
Sbjct: 126 AEHCG--DVVPQEYMLEFSKVRSLSPEQFVEKLASE-LKVKGVVAGANYRFGYKAAGDAS 182

Query: 139 ILQKRGEKYGFHT---------------VFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
            L +  ++YG  +               V +D+    K Q VS++ +R AL  G +   A
Sbjct: 183 DLVRLCQEYGLQSAIVNPIMDASEMSSPVLVDDSSREKGQ-VSTTRVRKALANGDMKRVA 241

Query: 184 HLLG--YRFTIESD 195
            LLG  +R  I  D
Sbjct: 242 ELLGRRHRLVIRPD 255


>gi|152990875|ref|YP_001356597.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Nitratiruptor sp. SB155-2]
 gi|151422736|dbj|BAF70240.1| riboflavin biosynthesis regulatory protein RibF [Nitratiruptor sp.
           SB155-2]
          Length = 263

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 41/295 (13%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLS-----FNPHPRTIIQSSSPIFTLSPPS 76
           +AIG FDG+H GH  + +   K++ N  + V+        P     I +S P +      
Sbjct: 1   MAIGAFDGMHRGHQALFQ---KLSLNGAVAVIDKGYAVLTPGYERCIHTSYPCYFFPLQK 57

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           I+   L+  GF  L++ +F                      ++ V+ G  F FGKDR   
Sbjct: 58  IRH--LDAKGFLDLLQKRFP--------------------SLQRVVVGYDFAFGKDRKYG 95

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
              L+K   GE      V ID +       V S  I+  L  G +  A  +LG  ++I  
Sbjct: 96  IDDLEKLFHGEVIVVEEVQIDGI------AVHSRTIKELLRHGDIRMANRMLGRTYSIAG 149

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V  G  +G+     T N+++   +L KEGVYA  +       +  V   G+  ++  +G
Sbjct: 150 SVQKGLGLGKKKLVATLNLKIKDFLLPKEGVYAT-WSGLGGEIFPSVTFIGKRESV--DG 206

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +E+ I D   +   +   + F  +LR   KF     LK  +  D + A++I+
Sbjct: 207 SFSIETHIIDKKIDYPVEAVRIYFVQFLRENRKFDSFTSLKRQIESDIRMAKEIV 261


>gi|319957365|ref|YP_004168628.1| riboflavin kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419769|gb|ADV46879.1| Riboflavin kinase [Nitratifractor salsuginis DSM 16511]
          Length = 272

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 37/291 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            + +G+FDG+H+ H  ++E A  +A                +I+  S   TL+P   +  
Sbjct: 10  AITLGSFDGMHVAHQALIEAAEAVA----------------VIERQSG--TLTPGYKRSW 51

Query: 81  ILEK-MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             +K M F    R +      + S + F+  +   +  ++ ++ G  F FG  R G+   
Sbjct: 52  YTDKPMDFYLFDRIR------SLSPKAFVAMLREHYPRLRKIVVGYDFHFGVGRGGNAET 105

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+   E +      + E++  +   V +  IR  L  G +  A  LLG  + I+ + + G
Sbjct: 106 LK---ELFDGEVRIVPEIKV-EGVPVHARTIRELLRNGDLALANRLLGRCYLIDGEPVRG 161

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG-RNPTMVPNGPLLL 258
           +  G     PT N+Q+    L  EGVYA  +    +  Y  V   G R+ T   +G   +
Sbjct: 162 QGRGSREFVPTINLQVEGYELPAEGVYA-GYTHLGEACYPSVIFLGYRDST---DGSFAV 217

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK--IYMGEDEKKAR 306
           E+ + D     +   R  + F   LRP  +F +  +LK  IY+  ++  AR
Sbjct: 218 ETHLLDKIIGPVEEPRVALEFEALLRPNRRFDNPAELKEQIYLDIEKAMAR 268


>gi|255076219|ref|XP_002501784.1| predicted protein [Micromonas sp. RCC299]
 gi|226517048|gb|ACO63042.1| predicted protein [Micromonas sp. RCC299]
          Length = 301

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 113/277 (40%), Gaps = 52/277 (18%)

Query: 11  QSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSS 67
           + +P    GG  VVA+G FD +H GH  +  +A K+   +PI ++SF      +  +   
Sbjct: 28  ERIPPAEDGGKIVVALGKFDAMHRGHAELARRASKM--GAPI-LMSFGGMAEVLGWEEKL 84

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETA-------NYSAEQFIQKVLVEWLEVKT 120
           P+     P  + ++LE   + A    K   E           S E+F+  +  + + V  
Sbjct: 85  PVVA---PGDRARVLEM--WKAACEGKTVREHVIPFADIRRMSPEEFVSTL--KDIGVGG 137

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-------------SQIVSS 167
           V+ G  +RFG   AG   IL+  GEK G     +D L  N+             +  VSS
Sbjct: 138 VVAGANYRFGFKAAGTADILKDLGEKLGVDVSIVDLLPANEPGDEGVYPAGYENTPQVSS 197

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPT-ANMQLSPDILLKEGVY 226
           + +R  L  G V  AA LLG    +   +      GR   FPT A     P I    G Y
Sbjct: 198 TRVRACLAAGDVEQAARLLGRNHALVLRIAGAGNDGR---FPTSAATNQYPAI----GRY 250

Query: 227 AIRFRTQDQTSYSGVANFGRNPTM--VPNGPLLLESF 261
           A      D          GR PT   V +G ++LE +
Sbjct: 251 AAIVVGADG---------GRTPTTAEVTDGEIVLEGW 278


>gi|295107326|emb|CBL04869.1| FAD synthase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 118

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G   G  LGF TAN+ + PD L  L +GVYA  +   D T Y    N G   T       
Sbjct: 8   GRGEGADLGFRTANLAV-PDQLRPLGDGVYAA-YAQVDGTRYKAAVNVGVAATFADRATA 65

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             E  + DF+ ++YG+   V F  +LRP  KF D+E+L
Sbjct: 66  TCEVHLLDFAGDLYGKPVKVEFLHWLRPMRKFDDVEEL 103


>gi|218509038|ref|ZP_03506916.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
          etli Brasil 5]
          Length = 52

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 33/45 (73%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA 45
          M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA
Sbjct: 1  MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHQSVLNRALEIA 45


>gi|295400092|ref|ZP_06810072.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977871|gb|EFG53469.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 127

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII-QSSSPIFTLSPPS 76
            V A+G FDG+HLGH  +++   K+A    +   V+SF PHP+ II ++   +  L PP+
Sbjct: 20  AVAALGFFDGVHLGHQKVIQTTKKLAEKMGLKTAVISFFPHPKEIIGKTGERVHYLLPPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
            + K   ++G       +FT E A    ++F+QK+ 
Sbjct: 80  EKAKKFSRLGVDYFYLIRFTPEFARLEPKEFVQKIF 115


>gi|256376743|ref|YP_003100403.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
 gi|255921046|gb|ACU36557.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
          Length = 790

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQD----Q 235
           NA   LG    +   V+HG   G+ LGFPTAN+       + E GVYA RF   D     
Sbjct: 444 NAVEPLGR---VSGVVVHGAGRGKDLGFPTANLDFDASTRVPEDGVYAGRFTLLDGPDAP 500

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + + G N T        +E+ + DF  ++Y +R  V    ++R ++ F  +E L 
Sbjct: 501 VVLPALVSIGSNETF-DGSARTVEAHVLDFDGDLYDRRAEVELESWIRGQVGFSSVEALV 559

Query: 296 IYMGEDEKKARKILESSYP 314
             M  DE   R    SS P
Sbjct: 560 EQMRRDEVVGRAHFSSSGP 578


>gi|196229765|ref|ZP_03128629.1| FAD synthetase [Chthoniobacter flavus Ellin428]
 gi|196226091|gb|EDY20597.1| FAD synthetase [Chthoniobacter flavus Ellin428]
          Length = 152

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
           ++LP  L    +AIG FDG+HLGH  ++ +A+  A     T  V++F+PHP  +++    
Sbjct: 19  RNLPGPLH---LAIGVFDGVHLGHQAVICRALDGARQGGGTAVVVTFDPHPVRVLRPEHA 75

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + +++  +G +  +   F    A    E FI+++      ++ +  G ++ 
Sbjct: 76  PRLLTSTAHKLQLIRDLGVTHQLIIHFDHAFAATPPEDFIRELAAAAQPLQEICVGFEWC 135

Query: 129 FGKDRAGDRGILQKRG 144
           FGK RAG+  ++++ G
Sbjct: 136 FGKGRAGNLALIERLG 151


>gi|149006214|ref|ZP_01829926.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761991|gb|EDK68953.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP18-BS74]
          Length = 145

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS--PPS 76
           VV +G FDGIH GH  +   A K A     PI V++FN  P+  ++   P   L    P+
Sbjct: 20  VVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPA 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E+ L++ G   L    F+ + A+ +A++F     ++ +  K ++ G  + FG D+   
Sbjct: 80  ERERKLKREGVEELYLLDFSSQFASLTAQEFFA-TYIKAMNAKIIVAGFDYTFGSDKKNS 138

Query: 137 R 137
           R
Sbjct: 139 R 139


>gi|67469859|ref|XP_650901.1| Riboflavin kinase / FAD synthetase [Entamoeba histolytica
           HM-1:IMSS]
 gi|56467567|gb|EAL45515.1| Riboflavin kinase / FAD synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 131

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 5/112 (4%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           TI+ +V+ G + GRT+G+PTAN  ++P I L++GVY  + +   +  ++ ++  G+NPT 
Sbjct: 4   TIKGNVVKGFQRGRTIGYPTAN--INPTIELEQGVYYGQVKLMGKVYHAAIS-VGKNPTF 60

Query: 251 VPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
                +++E  IF+ F  E YG+   V    +LR   K   I++LK  +  D
Sbjct: 61  CLKN-IVVEVHIFEQFKDEFYGEEIEVKIMKFLRGMKKVNGIDELKKMISND 111


>gi|193216700|ref|YP_001999942.1| hypothetical protein MARTH_orf367 [Mycoplasma arthritidis 158L3-1]
 gi|193002023|gb|ACF07238.1| FAD synthase [Mycoplasma arthritidis 158L3-1]
          Length = 290

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 44/233 (18%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           + +G F+ +HLGH+ ++++A +I A NS       N     ++++S     ++   IQEK
Sbjct: 23  ICLGGFESLHLGHYELIKKAREINATNSE------NKLAILLLKNS-----INKGRIQEK 71

Query: 81  ILEKMG-----FSAL-IRYKFTLETA----NYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L ++       SAL   Y F +E +    N SAE+FI+K  ++ + VK ++ G  F FG
Sbjct: 72  KLFQLKTRLYTISALNFDYAFYIEVSEDLINLSAEKFIEK--LKEINVKQIVCGPDFCFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
            +R G   +L     K  F    ++E + NK +I SSS I   ++ G+++ A  LL  ++
Sbjct: 130 HNRMGSIAML-----KENFAVSVVEERKINKQKI-SSSLITELISDGNIIEANKLLLEKY 183

Query: 191 TIESDVIHGEKIGR-TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              ++      I R    +P   ++      LK G+Y +    +D   Y GV 
Sbjct: 184 AFITN------INRFKFTYPQNLVK------LKAGIYCVNVVIKD-IEYHGVC 223


>gi|145349408|ref|XP_001419126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579357|gb|ABO97419.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 175

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQEK 80
           V +G FD +H GH  + E+A   A    + V+SF+    T+  ++  PI   + PS + +
Sbjct: 1   VCLGKFDAMHRGHLALAERA---ATRGDVVVVSFSGMAETLGWETRLPI---TAPSDRSR 54

Query: 81  ILEKM-GFSALIRYKFTL---ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +L    G +     +  L   +    S E F++  ++  + V  V+TG  +RFG   AGD
Sbjct: 55  VLAMWSGTTGAAVSEHALAFGDVRELSPEAFVE--MLARMGVGAVVTGKNYRFGYKAAGD 112

Query: 137 RGILQKRGEKYGFHTVFIDEL---RNNKSQI---VSSSNIRTALTKGHVLNAAHLLG 187
              L++ GE  G     +D +   R + + +   VSSS IR+AL+ G +     +LG
Sbjct: 113 VEALKRFGEANGLTVDVVDLVPARRPSSAGLGDQVSSSRIRSALSAGDIDEVNEMLG 169


>gi|254467720|ref|ZP_05081127.1| Riboflavin kinase [Rhodobacterales bacterium Y4I]
 gi|206684157|gb|EDZ44643.1| Riboflavin kinase [Rhodobacterales bacterium Y4I]
          Length = 188

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   VV +G FDG+H GH  ++   ++ A     P  V +F+P P+     ++ +  L+ 
Sbjct: 17  LGASVVTLGAFDGVHSGHQALIAGTVRRARALGVPSVVCTFDPPPKVFFGRAAQLCPLA- 75

Query: 75  PSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
               EK+  +  +G   ++ + F     + S + F+ +  +  L  + +  G  FRFG  
Sbjct: 76  ----EKLARISALGPDHVVVFSFGEALRSLSPDAFMTR--LARLRPQEIRVGGDFRFGAK 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +AG   +L +R     F       +R    ++VSS+ IR  L +G
Sbjct: 130 QAGGVCLLARR-----FDVHIQPPVRCAAGEVVSSTRIRGLLEQG 169


>gi|302558064|ref|ZP_07310406.1| riboflavin biosynthesis protein RibF [Streptomyces griseoflavus
           Tu4000]
 gi|302475682|gb|EFL38775.1| riboflavin biosynthesis protein RibF [Streptomyces griseoflavus
           Tu4000]
          Length = 124

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q +   + + + G NP  
Sbjct: 1   MEGVVVRGAQRGRDLGFPTANVETLPHTAIPADGVYAGWLHAQGEAMPAAI-SVGTNPQF 59

Query: 251 VPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  +E++  D    ++YG    V F  ++R + KF  +E L   M ED K+ ++++
Sbjct: 60  -DGTERTVEAYAIDRVGLDLYGLHVAVDFLSFVRGQAKFDTLEALLEQMAEDVKRCKELV 118

Query: 310 ESS 312
            ++
Sbjct: 119 AAA 121


>gi|224093972|ref|XP_002310055.1| predicted protein [Populus trichocarpa]
 gi|222852958|gb|EEE90505.1| predicted protein [Populus trichocarpa]
          Length = 391

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 28/191 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSS-SPI 69
           + GG+VA+G FD +H+GH  +  QA K+   S ++      +L + P    + +   S +
Sbjct: 111 VAGGIVALGKFDALHIGHRELAIQASKVGAPSLLSFVGMAEILGWEPRAPIVAKCDRSRV 170

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            +   P     + E+      ++ +F+    + +  QF++K+  E L V  V+ G  +RF
Sbjct: 171 LSSWAPYCGNLVPEE------VQIEFSC-VRHLTPRQFVEKLSKE-LGVIGVVAGENYRF 222

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALTK 176
           G   AGD   L +  +++G     I  + +N                 VSS+ +R AL  
Sbjct: 223 GYKAAGDASELVRLCKEHGMGAYIISSVMDNNQDYRSMNSNDLKDRGQVSSTRVRQALAV 282

Query: 177 GHVLNAAHLLG 187
           G +   + LLG
Sbjct: 283 GDMKYVSELLG 293


>gi|123390012|ref|XP_001299812.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
 gi|121880739|gb|EAX86882.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
          Length = 134

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 12/123 (9%)

Query: 195 DVIHGEKIGRT-LGFPTANM-------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           +VIHG   G T LGFPTAN+       +++P+   + GVY    R +   +   V + G+
Sbjct: 10  EVIHGFGRGSTKLGFPTANIDPKSWDEKVNPN---EYGVYCGLVRVRHDPNRFCVFSIGK 66

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT     P   E  I DF+ +IYG+  TV    Y+RP I F  I  L   +  D + AR
Sbjct: 67  NPTFQTEEPTF-EVHILDFNDDIYGEIITVEVLAYIRPMITFNSIGDLIKQITTDCQTAR 125

Query: 307 KIL 309
             L
Sbjct: 126 DTL 128


>gi|294498831|ref|YP_003562531.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium QM B1551]
 gi|294348768|gb|ADE69097.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium QM B1551]
          Length = 240

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +  I+  V+ G K GR LGFPTAN+    +  LK GVY +    +    + GV N G  P
Sbjct: 13  KLIIKGQVVPGRKQGRYLGFPTANIDTQHE-ELKNGVYGVLVHLRG-LEHIGVMNVGVKP 70

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T         E  I DF+  IYG+         +R E KF  IE LK  +  D  +A++
Sbjct: 71  TFGSELSKTFEVHILDFNDVIYGETVQCDVIFRVRGEKKFPSIEFLKHQIKADTLQAKQ 129


>gi|308189860|ref|YP_003922791.1| riboflavin kinase [Mycoplasma fermentans JER]
 gi|319777053|ref|YP_004136704.1| riboflavin biosynthesis protein [Mycoplasma fermentans M64]
 gi|307624602|gb|ADN68907.1| riboflavin kinase [Mycoplasma fermentans JER]
 gi|318038128|gb|ADV34327.1| Riboflavin biosynthesis protein [Mycoplasma fermentans M64]
          Length = 290

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  IG+F+  HLGH+ +LE+A ++A  S      VL +      + ++ + IF+ +   +
Sbjct: 18  IFIIGSFESFHLGHYKLLEKARELAKESEKERDIVLVYFEDIENLSKTKNLIFSDAKNRV 77

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           QE    K+ F+  + Y    + ++ SA+ FI K++    +   VI G +F+FG  R+G+ 
Sbjct: 78  QEFANLKINFAISLFYS---QISHLSAQDFIDKLIANQDDYSFVI-GEEFKFGFKRSGNV 133

Query: 138 GILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHV--LNAAHLLGYRFTIES 194
             L+     Y    VF  E +R    Q +S+S ++  +  G +  LN  ++  Y F+ + 
Sbjct: 134 QFLENH---YNKDKVFAQEVVRLKNKQKISTSYLKELIEFGDIDLLNTINMFPYSFSAKF 190

Query: 195 DVIHG--EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             I    E     L  P           L++G+YA+     +   Y+
Sbjct: 191 STIENKIELKKHELLIP-----------LRQGIYAVLVELNNYNYYA 226


>gi|238809837|dbj|BAH69627.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 299

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  IG+F+  HLGH+ +LE+A ++A  S      VL +      + ++ + IF+ +   +
Sbjct: 27  IFIIGSFESFHLGHYKLLEKARELAKESEKERDIVLVYFEDIENLSKTKNLIFSDAKNRV 86

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           QE    K+ F+  + Y    + ++ SA+ FI K++    +   VI G +F+FG  R+G+ 
Sbjct: 87  QEFANLKINFAISLFYS---QISHLSAQDFIDKLIANQDDYSFVI-GEEFKFGFKRSGNV 142

Query: 138 GILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHV--LNAAHLLGYRFTIES 194
             L+     Y    VF  E +R    Q +S+S ++  +  G +  LN  ++  Y F+ + 
Sbjct: 143 QFLENH---YNKDKVFAQEVVRLKNKQKISTSYLKELIEFGDIDLLNTINMFPYSFSAKF 199

Query: 195 DVIHG--EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             I    E     L  P           L++G+YA+     +   Y+
Sbjct: 200 STIENKIELKKHELLIP-----------LRQGIYAVLVELNNYNYYA 235


>gi|297808337|ref|XP_002872052.1| hypothetical protein ARALYDRAFT_489194 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317889|gb|EFH48311.1| hypothetical protein ARALYDRAFT_489194 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 353

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 33/195 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIF 70
           + GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +      
Sbjct: 79  VAGGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGMAEVLGWKPRAPIVAKCDRKRV 138

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRF 129
             S  S         G  A + ++    +  + + +QF++K+  E L V  V+ G  +RF
Sbjct: 139 LSSWASY-------CGNVAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGENYRF 190

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-----------------VSSSNIRT 172
           G   +GD   L +  ++YG     I+ +  +K+Q+                 VSS+ +R 
Sbjct: 191 GYRASGDASELVRLCKEYGISAYIINSVM-DKNQVSGNTDTEEDSKSKERGQVSSTRVRH 249

Query: 173 ALTKGHVLNAAHLLG 187
           AL  G V     LLG
Sbjct: 250 ALAAGDVRYVTELLG 264


>gi|295704153|ref|YP_003597228.1| riboflavin biosynthesis protein [Bacillus megaterium DSM 319]
 gi|294801812|gb|ADF38878.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium DSM 319]
          Length = 240

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +  I+  V+ G + GR LGFPTAN+    +  LK GVY +    +    + GV N G  P
Sbjct: 13  KLIIKGQVVPGRQQGRHLGFPTANIDTQHE-ELKNGVYGVLVHLRG-LEHIGVMNVGVKP 70

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T         E  I DF+  IYG+         +R E KF  IE LK  +  D  +A++
Sbjct: 71  TFGSKLSKTFEVHILDFNDVIYGETVQCDVIFRVRGEKKFPSIEFLKHQIKADTLQAKQ 129


>gi|313678669|ref|YP_004056409.1| riboflavin kinase-like protein [Mycoplasma bovis PG45]
 gi|312950646|gb|ADR25241.1| riboflavin kinase-like protein [Mycoplasma bovis PG45]
          Length = 295

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG F+  HLGH+ + E+A +I  NS   I ++ F             IFT     IQ
Sbjct: 18  IYLIGVFESFHLGHNFLYEKAKEIKKNSARDIVIVFFKDVEHMFKNKDGYIFTNFENRIQ 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E     +GF+  I  +F    A   A+ F++K+L    E   V+ G  FRFG +  G+  
Sbjct: 78  E--FANLGFTNGIYLEFEKLWA-LDADSFLKKLLKNQDESIDVVVGKDFRFGLNAKGNID 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV--LNAAHLLGYRFTIESDV 196
            +         H V I ++ +N    VS++ +++ +  G +  +N+ +L  Y F+ + + 
Sbjct: 135 TIMNFVGAERVHPVDIVKIGDNIK--VSTTFLKSCIEIGDIELVNSLNLYIYSFSAQINA 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYS 239
              E           N+    +I+ LK+G+Y       + T Y+
Sbjct: 193 DDNEN--------KVNLVTDSNIVPLKDGIYLCYIEINEMTYYA 228


>gi|297806875|ref|XP_002871321.1| hypothetical protein ARALYDRAFT_487667 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317158|gb|EFH47580.1| hypothetical protein ARALYDRAFT_487667 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 367

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 3   VFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------V 52
            F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      V
Sbjct: 80  CFSQREDDTELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGTPYLLSFVGMAEV 139

Query: 53  LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKV 111
           L + P    + +        S  S         G  A   ++    +  + + +QF++K+
Sbjct: 140 LGWEPRAPIVAKCDRKRVLTSWASY-------CGDRAPEEHEIEFASVRHLTPQQFVEKL 192

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI------- 164
             E L V  V+ G  +RFG   +GD   L +  E+YG     I+ + + K          
Sbjct: 193 SKE-LRVCGVVAGENYRFGYKASGDAFELVRLCEEYGITAYIINSVMDKKQGSGKRDSGD 251

Query: 165 ------VSSSNIRTALTKGHVLNAAHLLG 187
                 VSS+ +R AL  G +   + LLG
Sbjct: 252 SKDRGQVSSTRVRQALAAGDMKYVSELLG 280


>gi|22326656|ref|NP_568192.2| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|17380946|gb|AAL36285.1| unknown protein [Arabidopsis thaliana]
 gi|20258953|gb|AAM14192.1| unknown protein [Arabidopsis thaliana]
 gi|197258080|gb|ACH56224.1| RibF2 [Arabidopsis thaliana]
 gi|332003903|gb|AED91286.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 367

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 32/210 (15%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 79  NCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGAPYLLSFVGMAE 138

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQK 110
           VL + P    + +        S  S         G  A   Y+    +  + +  QF++K
Sbjct: 139 VLGWEPRAPIVAKCDRQRVLTSWASY-------CGDRAPEEYEIEFASVRHLTPRQFVEK 191

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI------ 164
           +  E L V  V+ G  +RFG   +GD   L +  E+ G     I+ + + K         
Sbjct: 192 LSKE-LRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSG 250

Query: 165 -------VSSSNIRTALTKGHVLNAAHLLG 187
                  VSS+ +R AL  G +   + LLG
Sbjct: 251 DSKDRGQVSSTRVRQALAAGDMRYVSELLG 280


>gi|225463681|ref|XP_002273393.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 275

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSI 77
           GG+VA+G FD +H+GH  +  QA ++   +P  +LSF      +  +  +PI        
Sbjct: 5   GGIVALGKFDALHIGHRELAIQASRVG--APF-LLSFVGMAEVLGWEPRAPIVAKCD--- 58

Query: 78  QEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           ++++L         +   +F +E ++    +  QF++K+  E L V+ V+ G  +RFG  
Sbjct: 59  RKRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKE-LGVRGVVAGENYRFGYK 117

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALTKGHV 179
            AGD   L +  E++G     I  + +N                 VSS+ +R AL+ G +
Sbjct: 118 AAGDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERGQVSSTRVRHALSIGDM 177

Query: 180 LNAAHLLG 187
              + LLG
Sbjct: 178 KYVSELLG 185


>gi|21553715|gb|AAM62808.1| unknown [Arabidopsis thaliana]
          Length = 354

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 40/198 (20%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIF 70
           + GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +      
Sbjct: 82  VAGGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCD---- 137

Query: 71  TLSPPSIQEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGT 125
                  ++++L        ++   +F +E A+    + +QF++K+  E L V  V+ G 
Sbjct: 138 -------RKRVLSSWASYCGSIAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGE 189

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----------------VSSSN 169
            +RFG   +GD   L +  + +G     I+ +  +K+Q+                VSS+ 
Sbjct: 190 NYRFGYRASGDASELVRLCKDFGISAYIINSVM-DKNQVSVNTEEEDSKSKERGQVSSTR 248

Query: 170 IRTALTKGHVLNAAHLLG 187
           +R AL  G V     LLG
Sbjct: 249 VRHALAAGDVRYVTELLG 266


>gi|42573309|ref|NP_974751.1| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|332003904|gb|AED91287.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 351

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 32/210 (15%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 79  NCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGAPYLLSFVGMAE 138

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQK 110
           VL + P    + +        S  S         G  A   Y+    +  + +  QF++K
Sbjct: 139 VLGWEPRAPIVAKCDRQRVLTSWASY-------CGDRAPEEYEIEFASVRHLTPRQFVEK 191

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI------ 164
           +  E L V  V+ G  +RFG   +GD   L +  E+ G     I+ + + K         
Sbjct: 192 LSKE-LRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSG 250

Query: 165 -------VSSSNIRTALTKGHVLNAAHLLG 187
                  VSS+ +R AL  G +   + LLG
Sbjct: 251 DSKDRGQVSSTRVRQALAAGDMRYVSELLG 280


>gi|325473487|gb|EGC76682.1| riboflavin biosynthesis protein [Treponema denticola F0402]
          Length = 287

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 9/221 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +++G FDG H GH  +L Q +  A  + +   +++F   P   +++ +    +S  
Sbjct: 30  KETAISVGGFDGPHKGHDKLLRQVLSYAAENALVPGLVTFFRSP-AAVKNKAYSGDVSSL 88

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ K  +++GF  ++   F+   A      F   +L++ + +K +  G+ F  G  R  
Sbjct: 89  RLRLKKFQELGFHFIVLIDFSASFAKIEGTAFFD-ILIKTIRMKYLAVGSDFFCGYRRGL 147

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+K   + GF    ID + N  S  +SSS IR A+  G    A  LLGY F  +  
Sbjct: 148 GVDDLKKIAPQKGFCFDSIDPV-NRGSLKISSSAIREAVRLGDFSLAKELLGYPFLFDFV 206

Query: 196 VIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            +  E K   T+  P A +     IL + G Y +  +  D+
Sbjct: 207 SLPWEVKDKNTIFAPKAYIS---QILPQSGKYRVLVQKTDR 244


>gi|148906859|gb|ABR16575.1| unknown [Picea sitchensis]
          Length = 362

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 31/201 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSI 77
           GG+VA+G FD +H+GH    E AI+ A      +LSF      + ++   P+        
Sbjct: 79  GGIVALGKFDALHVGHR---ELAIRAAKIGVPFLLSFVGIAEVLGLEKRLPVVAKCD--- 132

Query: 78  QEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           ++++L         ++ +++ ++ A+    S  QF++K+  E L VK V+ G  +RFG  
Sbjct: 133 RKRVLSLWAPLCDGVVPHEYHVQFAHVRYLSPRQFVEKLSKE-LGVKGVVAGANYRFGYK 191

Query: 133 RAGDRGILQKRGEKYGFHTVFID-----------ELRNNKSQI-----VSSSNIRTALTK 176
             GD   L +   +YG     +D           E  N  + +     VSS+ +R AL  
Sbjct: 192 ALGDASDLVQLCGEYGLKAYIVDSVMDKFDGSSLEQENTGTDLREKGQVSSTLVRKALAA 251

Query: 177 GHVLNAAHLLG--YRFTIESD 195
           G++     LLG  +R  + +D
Sbjct: 252 GNIKRVEQLLGRKHRLMLTTD 272


>gi|15639873|ref|NP_219323.1| riboflavin kinase/FMN adenylyltransferase (ribF) [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189026111|ref|YP_001933883.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum SS14]
 gi|3323205|gb|AAC26578.1| riboflavin kinase/FMN adenylyltransferase (ribF) [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189018686|gb|ACD71304.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum SS14]
 gi|291060247|gb|ADD72982.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 275

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK-----IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           +G  +++G FDG H GH  + ++        +A+ +  T L    HP    ++SS    L
Sbjct: 19  RGAAISVGGFDGPHRGHAFLFDKVFAAACAPVADRARCTGLITFTHPPRKHKTSSYEGDL 78

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S   ++ +     GF  ++   F+ + A      F    L+  + V  +  G  FR G  
Sbjct: 79  STLRLRLRYFRARGFDFVVLIDFSKDFARIPGGVFFN-TLLRAVRVCYLAVGVDFRCGHG 137

Query: 133 RAGDRGI--LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              D G+  L++ G+ + F    +      +   VSSS +R A+      +A  LLG  F
Sbjct: 138 L--DTGVRELRRLGDAHSFVCDAVGHY-TLEGVRVSSSAVRRAVRCADFESARRLLGRAF 194

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           +++ +VI  ++ G       A        L  EG YA+R 
Sbjct: 195 SLDGEVIPWQQSGGCARTLCAERGRVSQTLPPEGEYAVRL 234


>gi|297742760|emb|CBI35394.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSI 77
           GG+VA+G FD +H+GH  +  QA ++   +P  +LSF      +  +  +PI        
Sbjct: 74  GGIVALGKFDALHIGHRELAIQASRVG--APF-LLSFVGMAEVLGWEPRAPIVAKCD--- 127

Query: 78  QEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           ++++L         +   +F +E ++    +  QF++K+  E L V+ V+ G  +RFG  
Sbjct: 128 RKRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKE-LGVRGVVAGENYRFGYK 186

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALTKGHV 179
            AGD   L +  E++G     I  + +N                 VSS+ +R AL+ G +
Sbjct: 187 AAGDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERGQVSSTRVRHALSIGDM 246

Query: 180 LNAAHLLG 187
              + LLG
Sbjct: 247 KYVSELLG 254


>gi|18420664|ref|NP_568429.1| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|10177822|dbj|BAB11188.1| unnamed protein product [Arabidopsis thaliana]
 gi|197258078|gb|ACH56223.1| RibF1 [Arabidopsis thaliana]
 gi|332005769|gb|AED93152.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 354

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 32/194 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIF 70
           + GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +      
Sbjct: 82  VAGGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRV 141

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRF 129
             S  S         G  A + ++    +  + + +QF++K+  E L V  V+ G  +RF
Sbjct: 142 LSSWASY-------CGNIAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGENYRF 193

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI----------------VSSSNIRTA 173
           G   +GD   L +  + +G     I+ +  +K+Q+                VSS+ +R A
Sbjct: 194 GYRASGDASELVRLCKDFGISAYIINSVM-DKNQVSVNTEEEDSKSKERGQVSSTRVRHA 252

Query: 174 LTKGHVLNAAHLLG 187
           L  G V     LLG
Sbjct: 253 LAAGDVRYVTELLG 266


>gi|42526549|ref|NP_971647.1| riboflavin biosynthesis protein, putative [Treponema denticola ATCC
           35405]
 gi|41816742|gb|AAS11528.1| riboflavin biosynthesis protein, putative [Treponema denticola ATCC
           35405]
          Length = 287

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +++G FDG H GH  +L Q +  A  + +   +++F   P   +++ +    +S  
Sbjct: 30  KETAISVGGFDGPHKGHDKLLRQVLTYAAENTLVPGLVTFFRSP-AAVKNKAYSGDVSSL 88

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ K  +++GF  ++   F+   A      F   +L++ + +K +  G+ F  G  R  
Sbjct: 89  RLRLKKFQELGFHFIVLIDFSASFAKIEGTAFFD-ILIKTIRMKYLAVGSDFFCGYRRGL 147

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
               L+K   + GF    ID + N  S  +SSS IR A+  G    A  LLGY F  +
Sbjct: 148 GVDDLKKIAPQKGFCFDSIDPV-NRGSLKISSSAIREAVRLGDFSLAKELLGYPFLFD 204


>gi|226495321|ref|NP_001151161.1| riboflavin kinase family protein [Zea mays]
 gi|195644710|gb|ACG41823.1| riboflavin kinase family protein [Zea mays]
          Length = 371

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 50/239 (20%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI- 77
           GG+VA+G FD +H+GH    E A+  +      +LSF      +  +    +T  PP + 
Sbjct: 104 GGIVALGKFDALHIGHR---ELAMHASKAGTPFLLSF------VGMAEVLGWTYRPPIVA 154

Query: 78  ---QEKILEKMGFSALIRYKFTLE-------TANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              ++++L    ++   R    LE         + S  QF+++ L + L +K V+ G  +
Sbjct: 155 HCDRKRVLSS--WAPYCRNVVPLEYQVEFSKVRSLSPRQFVER-LSKDLRIKGVVAGENY 211

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRN----------------NKSQIVSSSNIR 171
           RFG   +GD   L K  E++G     +  + +                +K Q VSSS +R
Sbjct: 212 RFGYKASGDATELVKLCEEFGLSAFIVRSVMDTAKRSLNGFSGAINSSDKGQ-VSSSRVR 270

Query: 172 TALTKGHVLNAAHLLGYR----FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            AL  G +   + LLG +      +    +H +K   ++  P + M   P     EG+Y
Sbjct: 271 HALAMGDMEYVSELLGRKHRLLLMVNQHCLHEKK---SIVLPNSCMLNMPP---AEGLY 323


>gi|148377494|ref|YP_001256370.1| hypothetical protein MAG_2280 [Mycoplasma agalactiae PG2]
 gi|148291540|emb|CAL58926.1| Riboflavin biosynthesis protein [Mycoplasma agalactiae PG2]
          Length = 295

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 18/224 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG F+  HLGH+ + E+A +I  NS   I ++ F          +  IFT     IQ
Sbjct: 18  IYLIGVFESFHLGHNFLYEKAKEIKGNSNRDIVIVFFRDIENMFKNKNGYIFTDFENRIQ 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E     +GF+  I  +F    A   A  F++K+      +  V+ G  FRFG +  G+  
Sbjct: 78  E--FANLGFAQGIYLEFEKLWA-LEANLFLEKLFKNQDGLIDVVVGKDFRFGLNAKGNLD 134

Query: 139 ILQKR-GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV--LNAAHLLGYRFTIESD 195
            +++  GEK   H+V I ++  N    VS++ +++ +  G +  +N+ +L  Y F   S 
Sbjct: 135 TIKETIGEK-NVHSVDIVKIGENIK--VSTTFLKSCIEIGDIELVNSLNLYTYSF---SA 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            I    I +++   T     S  I LK+G+Y       + T Y+
Sbjct: 189 YITFNDITKSIKLTTD----SNIIPLKDGIYLSYVEINEMTYYA 228


>gi|300123858|emb|CBK25129.2| Riboflavin kinase [Blastocystis hominis]
          Length = 152

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 6/124 (4%)

Query: 192 IESDVIHGEKIGRTL-GFPTANMQLS--PDIL--LKEGVYAIRFRTQDQTSYSGVANFGR 246
           IE  V+HG K G TL   PTAN+      D +   K+GVY   + +   T Y  VAN G+
Sbjct: 15  IEGTVVHGFKRGSTLLDCPTANICTDHIQDAIKDFKKGVY-YGWASLHGTVYKMVANIGK 73

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NP+       +    + +FSQ+ Y +   V     +R E KF  +++LK  + ED   A 
Sbjct: 74  NPSFGNEHVSVEVHLLHEFSQDFYDENLKVVILGSIRTESKFSSLDELKTAIHEDCGIAD 133

Query: 307 KILE 310
           K+L+
Sbjct: 134 KLLD 137


>gi|326513002|dbj|BAK03408.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 372

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 38/196 (19%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           G+VA+G FD +H+GH  +   A K          S NP   + +  +  +     P I  
Sbjct: 105 GIVALGKFDALHIGHRELAMHASK----------SGNPFLLSFVGMAEVLGWEYRPPIVA 154

Query: 80  KILEKMGFSALIRYKFTLETANYSAE----------QFIQKVLVEWLEVKTVITGTKFRF 129
               K   S+   Y   +    Y  E          QF++K+  + L +K V+ G  +RF
Sbjct: 155 HCDRKRVLSSWAPYCRNVVPLEYQVEFSKVRYLTPRQFVEKLSTD-LRIKGVVAGENYRF 213

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRN----------------NKSQIVSSSNIRTA 173
           G   +GD   L K  E++G     +  + +                +K Q VSSS +R A
Sbjct: 214 GYKASGDAAELVKLCEEFGLSAFIVRSVMDTAKGSYNGATPAVNSSDKGQ-VSSSRVRQA 272

Query: 174 LTKGHVLNAAHLLGYR 189
           L+ G +   + LLG +
Sbjct: 273 LSVGDIEYVSKLLGRK 288


>gi|326499910|dbj|BAJ90790.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 372

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 38/196 (19%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           G+VA+G FD +H+GH  +   A K          S NP   + +  +  +     P I  
Sbjct: 105 GIVALGKFDALHIGHRELAMHASK----------SGNPFLLSFVGMAEVLGWEYRPPIVA 154

Query: 80  KILEKMGFSALIRYKFTLETANYSAE----------QFIQKVLVEWLEVKTVITGTKFRF 129
               K   S+   Y   +    Y  E          QF++K+  + L +K V+ G  +RF
Sbjct: 155 HCDRKRVLSSWAPYCRNVVPLEYQVEFSKVRYLTPRQFVEKLSTD-LRIKGVVAGENYRF 213

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRN----------------NKSQIVSSSNIRTA 173
           G   +GD   L K  E++G     +  + +                +K Q VSSS +R A
Sbjct: 214 GYKASGDAAELVKLCEEFGLSAFIVRSVMDTAKGSYNGATPAVNSSDKGQ-VSSSRVRQA 272

Query: 174 LTKGHVLNAAHLLGYR 189
           L+ G +   + LLG +
Sbjct: 273 LSVGDIEYVSKLLGRK 288


>gi|332298594|ref|YP_004440516.1| FAD synthetase [Treponema brennaborense DSM 12168]
 gi|332181697|gb|AEE17385.1| FAD synthetase [Treponema brennaborense DSM 12168]
          Length = 284

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 16/205 (7%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G  +++G FDG+H GH  +    +   +  P  +++F   PR +   +     +S  + +
Sbjct: 32  GTALSVGGFDGMHAGHDALFNAVLARTDLLP-GIVTFAKPPRALRHPAVFEGAVSTLAQR 90

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I  + GF+  +   F+ E        F+  +L +   +K +  G  FR G   + D  
Sbjct: 91  LDICREKGFAFAVVIDFSGEFGRMEGSTFLS-ILADTFRMKFLAEGPDFRCGYKGSADID 149

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +++   EK G     I+ +  +  + VSS+ IR A+  G    A  LL   F ++  +  
Sbjct: 150 VIRTFTEKRGVVLDVIEPVVIDGER-VSSTRIRAAVAAGDFFGAERLLRRPFRLDCSLFR 208

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE 223
            E+              +PD+L  E
Sbjct: 209 WERS-------------APDVLTAE 220


>gi|324997427|ref|ZP_08118539.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pseudonocardia sp. P1]
          Length = 199

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++ +      LS    + ++    G  A+   +FT E A  + ++F ++VLV  L    V
Sbjct: 2   VLGTGRDTAALSTLGHRAELAADAGADAVCVLRFTRELAARTPQEFAREVLVAGLRAAAV 61

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  F FG   AG  G L++ G + GF    +D L        SS++ R  L  G +  
Sbjct: 62  VVGADFTFGARGAGTVGTLRELGRELGFTAHGVDLL-QEAGTTCSSTHARRCLRAGDLPG 120

Query: 182 AAHLLG 187
           A   LG
Sbjct: 121 AERALG 126


>gi|145532627|ref|XP_001452069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419746|emb|CAK84672.1| unnamed protein product [Paramecium tetraurelia]
          Length = 324

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)

Query: 194 SDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYA-IRFRTQDQTSYSGVANFGR 246
           S +IHG   G T LG PTAN+Q++ +I      L  GVYA I +    Q  Y GV + G 
Sbjct: 203 SKIIHGRNRGGTMLGIPTANLQINEEIQQLTKNLLPGVYAGITYLENKQ--YGGVLSIGY 260

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP  + + P  +E  ++ +F ++ YG    +    +LRPE  F+  + L   +  D+  A
Sbjct: 261 NPYFL-DTPQTIEVHLYGEFQEDFYGANLRLIITHFLRPESDFRTFDHLIKAISNDKIIA 319

Query: 306 RKIL 309
           RK++
Sbjct: 320 RKLV 323


>gi|291320156|ref|YP_003515417.1| riboflavin biosynthesis protein [Mycoplasma agalactiae]
 gi|290752488|emb|CBH40460.1| Riboflavin biosynthesis protein [Mycoplasma agalactiae]
          Length = 295

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 18/224 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +  IG F+  HLGH+ + E+A +I  NS   I ++ F          +  IFT     IQ
Sbjct: 18  IYLIGVFESFHLGHNFLYEKAKEIKGNSNRDIVIVFFKDVENMFKNKNGYIFTDFENRIQ 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E     +GF+  I  +F    A   A  F++K+      +  V+ G  FRFG +  G+  
Sbjct: 78  E--FANLGFAQGIYLEFEKLWA-LEANLFLEKLFKNQDGLIDVVVGKDFRFGLNAKGNLD 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV--LNAAHLLGYRFTIESDV 196
            +++   +   H+V I ++  N    VS++ +++ +  G +  +N+ +L  Y F+    +
Sbjct: 135 TIKETIGEQNVHSVDIVKIGENIK--VSTTFLKSCIEIGDIELVNSLNLYTYSFSANITI 192

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYS 239
               K+         N+    +++ LK+G+Y       + T Y+
Sbjct: 193 NDNTKL--------INLTTDSNVIPLKDGIYLSYVEINEMTYYA 228


>gi|254473660|ref|ZP_05087056.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
 gi|211957372|gb|EEA92576.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
          Length = 65

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
           +FDFS  +Y +  TV F  ++RPE+KF  I+ L   M +D  +AR ++ S  PLS  D++
Sbjct: 1   MFDFSGNLYEKLVTVCFIGFIRPELKFDGIDGLIAQMDQDSAEARAMIASMRPLSHLDQM 60

Query: 322 I 322
           +
Sbjct: 61  L 61


>gi|157060610|gb|ABV03311.1| RibF [Chlamydia trachomatis]
          Length = 96

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L K  + +A   LG  F+    V HG  IG + G+ T N+ L+   L
Sbjct: 6   EGTIVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-L 64

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 65  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 93


>gi|269115012|ref|YP_003302775.1| riboflavin biosynthesis protein [Mycoplasma hominis]
 gi|268322637|emb|CAX37372.1| Riboflavin biosynthesis protein [Mycoplasma hominis ATCC 23114]
          Length = 290

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 39/296 (13%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP---ITVLSF-NPHPRTIIQSSSPIFTLSPPSI 77
           + +G+F+ +HLGH+ + + A  +  + P   + ++ F NP   + + +   +     P  
Sbjct: 20  ICLGSFETLHLGHNELFKIAKDLKQSYPDQKLAIMMFKNPVKNSQVLTKKAM----QPKT 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +   L  +GF  +          N S   FIQ + +    VK V+ G  FRFG +R G+ 
Sbjct: 76  RLYTLAMLGFDYVFLVDVNQTILNCSYSDFIQGLKIN--NVKNVVCGQDFRFGFNREGNI 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K      F+    +EL+ NK +I SS+ I   + +G++     LL  +++I   ++
Sbjct: 134 DKLKKY-----FNVYVANELKVNKQKI-SSTIINEFIEEGNINGLNKLLIDKYSI---IV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV-----ANFGRNPTMVP 252
           + +K      +P    QL   I +   V+       +   Y G+       F  N  +  
Sbjct: 185 NSQKFN--FKYPEHLNQLKAGIYIANVVW-------NNIEYHGLIFINKNQFDSNNNLQE 235

Query: 253 NGPLLL---ESFIFDFSQEIYGQ--RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           N  + L   + FI  + QE+Y +  +C     +    +I   DIE  K Y   ++K
Sbjct: 236 NNIIYLFDIDYFISKY-QELYIEFLQCIRHINNNSENQISTNDIEIAKNYFIANKK 290


>gi|157060620|gb|ABV03316.1| RibF [Chlamydia trachomatis]
 gi|157060622|gb|ABV03317.1| RibF [Chlamydia trachomatis]
          Length = 116

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L K  + +A   LG  F+    V HG  IG + G+ T N+ L+   L
Sbjct: 26  EGTIVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-L 84

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 85  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 113


>gi|157060614|gb|ABV03313.1| RibF [Chlamydia trachomatis]
          Length = 120

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L K  + +A   LG  F+    V HG  IG + G+ T N+ L+   L
Sbjct: 30  EGTIVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-L 88

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 89  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 117


>gi|319639915|ref|ZP_07994643.1| hypothetical protein HMPREF9011_00240 [Bacteroides sp. 3_1_40A]
 gi|317388454|gb|EFV69305.1| hypothetical protein HMPREF9011_00240 [Bacteroides sp. 3_1_40A]
          Length = 84

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 41/75 (54%)

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  ++G+ N G  PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L
Sbjct: 9   EKKWAGMLNIGHRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDAL 68

Query: 295 KIYMGEDEKKARKIL 309
              M +D +K  KIL
Sbjct: 69  IAQMHKDREKTAKIL 83


>gi|157060606|gb|ABV03309.1| RibF [Chlamydia trachomatis]
          Length = 122

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 164 IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE 223
           IVSS  IR  L K  + +A   LG  F+    V HG  IG + G+ T N+ L+   LL  
Sbjct: 34  IVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHS-LLPL 92

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTM 250
           GVY      +   SY+GV N G  PTM
Sbjct: 93  GVYTCTIVIEG-FSYAGVMNLGMAPTM 118


>gi|218193925|gb|EEC76352.1| hypothetical protein OsI_13934 [Oryza sativa Indica Group]
          Length = 391

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 33/193 (17%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP-IFTL 72
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q     + T 
Sbjct: 125 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 184

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             P  +  +         I Y+       Y +  QF+++ L   L+++ V+ G  +RFG 
Sbjct: 185 WAPYCKNVVP--------IEYQVEFSKVRYLTPRQFVER-LSRDLKIQGVVAGENYRFGY 235

Query: 132 DRAGDRGILQKRGEKYGFHTVFI----DELR-----------NNKSQIVSSSNIRTALTK 176
             +GD   L K  E++G     +    D  R           ++K Q VSSS +R AL  
Sbjct: 236 RASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQ-VSSSRVRHALAM 294

Query: 177 GHVLNAAHLLGYR 189
           G +   + LLG +
Sbjct: 295 GDMEYVSELLGRK 307


>gi|308806888|ref|XP_003080755.1| riboflavin biosynthesis protein-related (ISS) [Ostreococcus tauri]
 gi|116059216|emb|CAL54923.1| riboflavin biosynthesis protein-related (ISS) [Ostreococcus tauri]
          Length = 606

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 23/213 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
            V +G FD +H GH      A   A    + ++SF     T+  +S  PI   + PS + 
Sbjct: 322 AVCLGKFDAMHRGH---FALAEAAAARGEVVLVSFAGMAETLGWESRLPI---TAPSDRT 375

Query: 80  KIL----EKMGFSALIRYKFTL-ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++L    EKMG + +  +     +    S + F++  ++  + V  V+ G  ++FG    
Sbjct: 376 RVLRKWSEKMGGTPVREHSMAFKDVRELSPDAFVE--MLARMGVGAVVAGENYKFGYKAV 433

Query: 135 GDRGILQKRGEKYGFHTVFIDEL-RNNKSQI-----VSSSNIRTALTKGHVLNAAHLLGY 188
           GD   L++ GE  G     +D +  N +S++     VSSS +R AL  G++ +   LL  
Sbjct: 434 GDSAALKQFGEANGMTVDVVDLVPANTRSRLGLGDQVSSSRVRRALLDGNIEDVNWLLER 493

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
              +  DV  GE++   L    A    S D+L+
Sbjct: 494 EHRLVLDV-QGERMQNAL--RAAASADSDDVLI 523


>gi|115455987|ref|NP_001051594.1| Os03g0801700 [Oryza sativa Japonica Group]
 gi|108711599|gb|ABF99394.1| riboflavin biosynthesis protein, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113550065|dbj|BAF13508.1| Os03g0801700 [Oryza sativa Japonica Group]
 gi|222625981|gb|EEE60113.1| hypothetical protein OsJ_12987 [Oryza sativa Japonica Group]
          Length = 391

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 33/193 (17%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP-IFTL 72
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q     + T 
Sbjct: 125 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 184

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             P  +  +         I Y+       Y +  QF+++ L   L+++ V+ G  +RFG 
Sbjct: 185 WAPYCKNVVP--------IEYQVEFSKVRYLTPRQFVER-LSRDLKIQGVVAGENYRFGY 235

Query: 132 DRAGDRGILQKRGEKYGFHTVFI----DELR-----------NNKSQIVSSSNIRTALTK 176
             +GD   L K  E++G     +    D  R           ++K Q VSSS +R AL  
Sbjct: 236 RASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQ-VSSSRVRHALAM 294

Query: 177 GHVLNAAHLLGYR 189
           G +   + LLG +
Sbjct: 295 GDMEYVSELLGRK 307


>gi|108711600|gb|ABF99395.1| riboflavin biosynthesis protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 388

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 33/193 (17%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP-IFTL 72
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q     + T 
Sbjct: 122 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 181

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             P  +  +         I Y+       Y +  QF+++ L   L+++ V+ G  +RFG 
Sbjct: 182 WAPYCKNVVP--------IEYQVEFSKVRYLTPRQFVER-LSRDLKIQGVVAGENYRFGY 232

Query: 132 DRAGDRGILQKRGEKYGFHTVFI----DELR-----------NNKSQIVSSSNIRTALTK 176
             +GD   L K  E++G     +    D  R           ++K Q VSSS +R AL  
Sbjct: 233 RASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQ-VSSSRVRHALAM 291

Query: 177 GHVLNAAHLLGYR 189
           G +   + LLG +
Sbjct: 292 GDMEYVSELLGRK 304


>gi|29150370|gb|AAO72379.1| unknow protein [Oryza sativa Japonica Group]
          Length = 345

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 33/193 (17%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP-IFTL 72
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q     + T 
Sbjct: 79  GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 138

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             P  +  +         I Y+       Y +  QF+++ L   L+++ V+ G  +RFG 
Sbjct: 139 WAPYCKNVVP--------IEYQVEFSKVRYLTPRQFVER-LSRDLKIQGVVAGENYRFGY 189

Query: 132 DRAGDRGILQKRGEKYGFHTVFI----DELR-----------NNKSQIVSSSNIRTALTK 176
             +GD   L K  E++G     +    D  R           ++K Q VSSS +R AL  
Sbjct: 190 RASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQ-VSSSRVRHALAM 248

Query: 177 GHVLNAAHLLGYR 189
           G +   + LLG +
Sbjct: 249 GDMEYVSELLGRK 261


>gi|237756218|ref|ZP_04584782.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691628|gb|EEP60672.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 111

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 203 GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
           GR LGFPT N++   D+ LK+GVYA  F   +      V N+G  PT+      +    I
Sbjct: 2   GRELGFPTINLKPDDDLCLKKGVYA-GFICYENLCQKAVINYGNRPTVDGTKTFMEAHII 60

Query: 263 FDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            D            + F  YLR E KF  +++LK  +  D +KA ++L
Sbjct: 61  EDLKIHPKTNDYVKLIFKKYLREEKKFNSVDELKNQIKLDIQKALEVL 108


>gi|50365099|ref|YP_053524.1| riboflavin kinase/FAD synthase [Mesoplasma florum L1]
 gi|50363655|gb|AAT75640.1| riboflavin kinase/FAD synthase [Mesoplasma florum L1]
          Length = 189

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 25/185 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF   +IN  + N  +     IG FD +H  H LI+E+   IA  NN    +++F+  
Sbjct: 10  MKVFKT-DINSIIQNE-RETCATIGMFDALHKYHKLIIEKTQTIAQENNLESIIITFDHK 67

Query: 59  P----RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           P     T++  +  I  ++         E      +I  +   +  N S EQF+ K+L  
Sbjct: 68  PTKGTETLLNENKKINYIN---------ENFQIDKMIILQVNNDLINTSKEQFV-KILKN 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             +V  ++ G+ FRFG +++GD   L+     +G   VFI E   N    +S+S I+  +
Sbjct: 118 KFKVIKLVEGSDFRFGFEKSGDVEYLKNS---FGEKNVFIYERDKN----ISTSKIKKLV 170

Query: 175 TKGHV 179
            +  +
Sbjct: 171 KENKI 175


>gi|167394447|ref|XP_001740972.1| riboflavin kinase [Entamoeba dispar SAW760]
 gi|165894674|gb|EDR22583.1| riboflavin kinase, putative [Entamoeba dispar SAW760]
          Length = 131

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 5/114 (4%)

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           + TI+  V+ G + GRT+G+ TAN  ++P   L++GVY  + + + +  ++ ++  G+NP
Sbjct: 2   QITIKGKVVKGFQRGRTIGYRTAN--INPTNELEQGVYYGQVKLRGKIYHAAIS-VGKNP 58

Query: 249 TMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           T       ++E  IF+ F  E YG+   V    +LR   K   I++LK  +  D
Sbjct: 59  TFCLKNT-VVEVHIFEQFKDEFYGEEIEVKIMKFLRGMKKVNGIDELKKMISND 111


>gi|302338541|ref|YP_003803747.1| FAD synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635726|gb|ADK81153.1| FAD synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 265

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 94/197 (47%), Gaps = 11/197 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++   E  +  P+  +   +++G FDG+H GH L++    +  +     + +F+ +PR
Sbjct: 1   MDIYSWAEFIEDPPHISQQSTISVGVFDGVHAGHKLLISYMERFPHTQKW-IFTFSENPR 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++S      L     + + L+++G ++++   F+ + +  + + F   + ++ + V  
Sbjct: 60  RLLRSGHFPGDLMTKFQKIEELKRLGITSVVLIDFSNDFSKLTGKDFFTAI-IKRIPVHA 118

Query: 121 VITGTKFRFGKDRAGD----RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           V+ G  FR G+  +      R  L  R  +     V I      +++ +SS+ IRTA+ +
Sbjct: 119 VVLGDNFRCGRGGSTSAYDVRDFLTSRNIE-----VMIPRPLAWRNRTISSTRIRTAIQE 173

Query: 177 GHVLNAAHLLGYRFTIE 193
           G  ++   +    FT++
Sbjct: 174 GDFVSVRMMTERAFTLD 190


>gi|253747059|gb|EET01951.1| Riboflavin kinase, FMN adenylyltransferase [Giardia intestinalis
           ATCC 50581]
          Length = 138

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNP 248
           F  +  VI G + GR + F TAN+ LS    L+EGV++   R +        V ++GRNP
Sbjct: 3   FCTKGTVIKGFQRGRIINFKTANLLLSDPDQLEEGVFSGWARVESNGDVLPAVISYGRNP 62

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T       L    +  F ++ YG     +    LR  IKF  IE+L   +  D + A+
Sbjct: 63  TFANKDRTLEVHILATFPEDFYGATLYTAIQRRLRSPIKFSGIEELNTQIKIDIEHAQ 120


>gi|311894916|dbj|BAJ27324.1| hypothetical protein KSE_14970 [Kitasatospora setae KM-6054]
          Length = 146

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPT 249
           +   V+HG   G+ LGFPTAN+   P  ++        +  +  T   +    + G NPT
Sbjct: 11  LAGTVVHGAGRGKGLGFPTANLAPVPGTVVPPPAIYSGWLARPATGGVHRATVSIGTNPT 70

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +  + +E    D S ++YG+R  + F   LR   +F  ++ L     ED +++  +L
Sbjct: 71  FGDSSEVHVEVHCHDTSDDLYGERVELWFVARLRDTERFATVDALLAAAREDVRRSDALL 130

Query: 310 ESSYPLSER 318
            S   L  R
Sbjct: 131 ASPAGLRAR 139


>gi|157060624|gb|ABV03318.1| RibF [Chlamydia trachomatis]
          Length = 116

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L +  + +A   LG  F     V HG  IG + G+ T N+ L+   L
Sbjct: 26  EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHS-L 84

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 85  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 113


>gi|157060612|gb|ABV03312.1| RibF [Chlamydia trachomatis]
          Length = 120

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L +  + +A   LG  F     V HG  IG + G+ T N+ L+   L
Sbjct: 30  EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHS-L 88

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 89  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 117


>gi|307111715|gb|EFN59949.1| hypothetical protein CHLNCDRAFT_14012 [Chlorella variabilis]
          Length = 131

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 192 IESDVIHGEKIG-RTLGFPTANMQLSPDIL----LKEGVYAIRFRTQDQTSYSGVANFGR 246
           +   VIHG   G + LG PTAN+  +P       L  GVY   +   D+  +  V N GR
Sbjct: 4   LSGRVIHGFGRGSKKLGVPTANLPPAPLAQQLAELPAGVY-FGWPEADRRVHKMVMNIGR 62

Query: 247 NPTMVPNGP-LLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            PT     P L +E+ +   +SQ+ Y Q   +    Y+RPE+KF  +++L   +  D   
Sbjct: 63  RPTFGDAEPELSVEAHVMHAYSQDFYDQPLRLVVLGYIRPEVKFGGLQELLARINTDIGI 122

Query: 305 ARKILE 310
           AR  L+
Sbjct: 123 ARSQLD 128


>gi|213863200|ref|ZP_03386455.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 75

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD  +LQK G +YGF             +I SS+ +R AL   ++  A  LL
Sbjct: 1   FRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRI-SSTAVRQALADDNLALAESLL 59

Query: 187 GYRFTIESDVIHGEKI 202
           G+ F I   V+HG+++
Sbjct: 60  GHPFAISGRVVHGDEL 75


>gi|157060616|gb|ABV03314.1| RibF [Chlamydia trachomatis]
          Length = 119

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L +  + +A   LG  F     V HG  IG + G+ T N+ L+   L
Sbjct: 29  EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHS-L 87

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 88  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 116


>gi|157060594|gb|ABV03303.1| RibF [Chlamydia trachomatis]
 gi|157060596|gb|ABV03304.1| RibF [Chlamydia trachomatis]
 gi|157060598|gb|ABV03305.1| RibF [Chlamydia trachomatis]
 gi|157060600|gb|ABV03306.1| RibF [Chlamydia trachomatis]
 gi|157060602|gb|ABV03307.1| RibF [Chlamydia trachomatis]
 gi|157060604|gb|ABV03308.1| RibF [Chlamydia trachomatis]
 gi|157060608|gb|ABV03310.1| RibF [Chlamydia trachomatis]
          Length = 122

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L +  + +A   LG  F     V HG  IG + G+ T N+ L+   L
Sbjct: 31  EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHS-L 89

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 90  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 118


>gi|157060618|gb|ABV03315.1| RibF [Chlamydia trachomatis]
          Length = 121

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L +  + +A   LG  F     V HG  IG + G+ T N+ L+   L
Sbjct: 31  EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHS-L 89

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           L  GVY      +   SY+GV N G  PTM
Sbjct: 90  LPLGVYTCTIVIEG-FSYAGVMNLGMAPTM 118


>gi|72080617|ref|YP_287675.1| hypothetical protein MHP7448_0278 [Mycoplasma hyopneumoniae 7448]
 gi|71913741|gb|AAZ53652.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 281

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  V  +G F+  HLGH  +L+ A +I++     V+     P  + +++   F+     
Sbjct: 14  LKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVIK---DPSKLPKNTKENFSDLNAR 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           IQ  ++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + +
Sbjct: 71  IQ--MMANSGVKNIILFDFNTELQQLSGEKFVEIFLK--LQVDFFVVGKNFAFGKNASWN 126

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              LQ+   +    T  I+ L++ + +I S+ N++  L  G   N    L   F I
Sbjct: 127 PEQLQEFFPR----TKIIEHLKDGQKKI-STKNLKLFLEFGDFENLNKFLATNFLI 177


>gi|159108684|ref|XP_001704611.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia ATCC
           50803]
 gi|157432679|gb|EDO76937.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia ATCC
           50803]
          Length = 138

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNP 248
           F  +  V+ G + GR + F TAN+ LS    L++GV++   R +        V ++G+NP
Sbjct: 3   FCTKGTVVRGFQRGRVINFKTANLVLSNQDQLEDGVFSGWARVELSGDVLPAVISYGKNP 62

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI------------ 296
           T       L    +  F ++ YG     +    LR  IKF  IE+L              
Sbjct: 63  TFANKSKTLEVHILATFPEDFYGATLYTTIQRRLRSPIKFSGIEELNAQIKMDIENAQVD 122

Query: 297 YMGEDEKKARKILE 310
           Y  E+ KKA  + E
Sbjct: 123 YTEENRKKAELLFE 136


>gi|308162096|gb|EFO64516.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia P15]
          Length = 138

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNP 248
           F  +  V+ G + GR + F TAN+ LS    L++GV++   R + +      V ++G+NP
Sbjct: 3   FCTKGTVVRGFQRGRVINFKTANLVLSNQDQLEDGVFSGWARVELNGDVLPAVISYGKNP 62

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           T       L    +  F ++ YG     +    LR  +KF  IE+L   +  D + A+
Sbjct: 63  TFANKNKTLEVHILATFPEDFYGATLYTTIQRRLRSPVKFSGIEELNAQIKMDIENAQ 120


>gi|123446039|ref|XP_001311774.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
 gi|121893596|gb|EAX98844.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
          Length = 139

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 196 VIHGEKIG-RTLGFPTANMQ-LSPDILLKE---GVYAIRFRTQDQTSYSGVANFGRNPTM 250
           V+ G + G R LGFPTAN+   S  I L E   GVY       +   Y  V + G+N T 
Sbjct: 11  VVKGFQRGSRQLGFPTANIDPKSWTIDLSEDDFGVYCGICSINNGPEYKCVFSIGKNVTF 70

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
               P   E  I +F ++IYG++ TV    ++R    FK IE LK  + +D
Sbjct: 71  EMTTPTF-EVHILNFDEDIYGEKITVYVHHFIRKMRAFKSIEDLKSRISQD 120


>gi|156403131|ref|XP_001639943.1| predicted protein [Nematostella vectensis]
 gi|156227074|gb|EDO47880.1| predicted protein [Nematostella vectensis]
          Length = 171

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 11/129 (8%)

Query: 192 IESDVIHGEKIG-RTLGFPTANMQLSPDILLKE-------GVYAIRFRTQDQTSYSGVAN 243
           I  +V+ G   G + LG PTAN    P+ L+ +       G+Y       +   Y  V +
Sbjct: 13  IRGEVVKGFGRGSKELGIPTANY---PEELVDQFGSSLGTGIYCGWASVDNGPVYKMVMS 69

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NP        +    I DF Q+ YG   +V   +YLRPE  +  +E L   + +D +
Sbjct: 70  VGWNPYYKNEKKSMETHIIHDFDQDFYGAELSVIVLNYLRPEKSYPSLESLIEAIHQDIE 129

Query: 304 KARKILESS 312
            A+K L+ +
Sbjct: 130 NAKKTLDQA 138


>gi|213410297|ref|XP_002175918.1| riboflavin kinase [Schizosaccharomyces japonicus yFS275]
 gi|212003965|gb|EEB09625.1| riboflavin kinase [Schizosaccharomyces japonicus yFS275]
          Length = 177

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 188 YRFTIESDVIHGEKIG-RTLGFPTAN-MQLSPDILLKE---GVYAIRFRTQDQTSYSGVA 242
           Y    + +V+HG   G R +G PTAN ++ +   LLKE   GVY    +  D   Y  V 
Sbjct: 23  YPIFFQGEVVHGFGRGSREMGIPTANILESAVQELLKERESGVYYGFAQVADGEVYPMVM 82

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + G NP             +  F Q+ YGQ+   +   Y+RPE+ ++ I+KL
Sbjct: 83  SVGWNPYYNNEKRTAEIHIMHSFPQDFYGQQVRAAVMGYIRPELDYEGIDKL 134


>gi|168020472|ref|XP_001762767.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686175|gb|EDQ72566.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 147

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 194 SDVIHGEKIG-RTLGFPTANM---QLSPDIL-LKEGVY----AIRFRTQDQTSYSGVANF 244
           + V+HG   G + +G PTAN+   +L  +IL L +GVY     ++    D      V N 
Sbjct: 9   AKVVHGFGRGSKQMGIPTANLNPEELPKEILDLPKGVYFGWVQVKGEGLDAGVQKMVMNV 68

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT   +   +    + D+  + YGQ   ++   ++RPE+KF  ++ L   +G+D K 
Sbjct: 69  GNRPTFADSDAEV--HILHDYKIDFYGQDVGIAVLGFIRPEMKFSSLDALVERIGDDIKA 126

Query: 305 ARKILE 310
           A   LE
Sbjct: 127 ATLYLE 132


>gi|54020335|ref|YP_115616.1| hypothetical protein mhp102 [Mycoplasma hyopneumoniae 232]
 gi|53987508|gb|AAV27709.1| riboflavin biosynthesis protein [Mycoplasma hyopneumoniae 232]
          Length = 281

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  V  +G F+  HLGH  +L+ A +I +     V+     P  + +++   F+     
Sbjct: 14  LKKPVFVLGGFEAFHLGHLKLLKIAAEINDEIVFMVIK---DPSKLPKNTKENFSDLNAR 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           IQ  ++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + +
Sbjct: 71  IQ--MMANSGVKNIILFDFNAELQQLSGEKFVEIFLK--LQVDFFVVGKNFAFGKNASWN 126

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              LQ+   +    T  I+ L++ + +I S+ N++  L  G   N    L   F I
Sbjct: 127 PEQLQEFFPR----TKIIEHLKDGQKKI-STKNLKLFLEFGDFENLNKFLATNFLI 177


>gi|313665226|ref|YP_004047097.1| riboflavin kinase [Mycoplasma leachii PG50]
 gi|312949280|gb|ADR23876.1| riboflavin kinase [Mycoplasma leachii PG50]
          Length = 184

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 12/174 (6%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           ++K  ++ IGNFDG H+ H  I+ + I+IA    +T  V+SF+   +  I  ++      
Sbjct: 15  NIKKSIITIGNFDGFHIYHQKIINKVIQIAKQENLTSIVMSFDKKIKDNITYTNLATKKQ 74

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
                   L  + +   I+   +L     + +QFI  VL+  L V  ++ G  F+FG   
Sbjct: 75  KLDFINNNLSDLDYFFDIKVDDSLIKT--TKDQFID-VLINKLNVIKIVEGQDFKFGYLS 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            G+   L K   K     V I +  N+    +SS+ I+  L +  V  A  LLG
Sbjct: 132 QGNIDDLIKAFSK---KNVIIFKRDND----ISSTKIKKLLDENLVDKAQELLG 178


>gi|312601252|gb|ADQ90507.1| Riboflavin biosynthesis protein [Mycoplasma hyopneumoniae 168]
          Length = 273

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  V  +G F+  HLGH  +L+ A +I++     ++     P  + +++   F+     
Sbjct: 6   LKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMLIK---DPSKLPKNTKENFSDLNAR 62

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           IQ  ++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + +
Sbjct: 63  IQ--MMANSGVKNIILFDFNTELQQLSGEKFVEIFLK--LQVDFFVVGKNFAFGKNASWN 118

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              LQ+   +    T  I+ L++ + +I S+ N++  L  G   N    L   F I
Sbjct: 119 PEQLQEFFPR----TKIIEHLKDGQKKI-STKNLKLFLEFGDFENLNKFLATNFLI 169


>gi|80477803|gb|AAI08784.1| MGC52924 protein [Xenopus laevis]
          Length = 154

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN       +L  DI    G+Y    +  +   Y  V + G NP        +
Sbjct: 21  KELGIPTANFAEKIVDRLPADI--STGIYYGWGQVGNGEVYKMVMSIGWNPFYKNTKKSM 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
               I DF ++ YG+  ++    Y+RPE  F  ++ L   +  D ++A+K LE     + 
Sbjct: 79  ETHIIHDFHEDFYGEILSIVIAGYIRPEKSFTSLDALISAIHSDIEEAKKRLELPEFQAL 138

Query: 318 RDRIIC 323
           RDR  C
Sbjct: 139 RDRFFC 144


>gi|293363921|ref|ZP_06610657.1| riboflavin kinase [Mycoplasma alligatoris A21JP2]
 gi|292552411|gb|EFF41185.1| riboflavin kinase [Mycoplasma alligatoris A21JP2]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT---VLSFNPHPRTIIQSSSPIFTLSPP 75
             V  +G F+ +HLGH+    +  K ANN   T   +L +  +   + + +S  FT    
Sbjct: 22  NDVFIMGAFESLHLGHY----ELFKKANNDFSTQRKILVYFNNSEQMTKFNSTFFT--SQ 75

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I++K + K+GF + I   ++ +  N   + FI   L+   +  T I G  F+FG     
Sbjct: 76  KIRDKWISKIGFDSAISIDYS-QIKNLEGKNFID--LIANSKKTTFIVGDDFKFGFKAKN 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               + K    Y   +V I ++ N K   +S+S ++  +  G +     LL +++T  S 
Sbjct: 133 TWKDISKFNPIYSVISVPILKVNNTK---ISTSKLKEFIEFGDIEELNDLLLFKYTFSST 189

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           V    KI + +     N+Q      L  GVY IR    +Q  Y G+
Sbjct: 190 V----KINKEI-ILNENIQ-----KLHSGVYIIRI-LYNQMLYYGL 224


>gi|148222868|ref|NP_001079669.1| hypothetical protein LOC379356 [Xenopus laevis]
 gi|28422186|gb|AAH46843.1| MGC52924 protein [Xenopus laevis]
          Length = 172

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN       +L  DI    G+Y    +  +   Y  V + G NP        +
Sbjct: 39  KELGIPTANFAEKIVDRLPADI--STGIYYGWGQVGNGEVYKMVMSIGWNPFYKNTKKSM 96

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
               I DF ++ YG+  ++    Y+RPE  F  ++ L   +  D ++A+K LE     + 
Sbjct: 97  ETHIIHDFHEDFYGEILSIVIAGYIRPEKSFTSLDALISAIHSDIEEAKKRLELPEFQAL 156

Query: 318 RDRIIC 323
           RDR  C
Sbjct: 157 RDRFFC 162


>gi|71893626|ref|YP_279072.1| hypothetical protein MHJ_0270 [Mycoplasma hyopneumoniae J]
          Length = 281

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  V  +G F+  HLGH  +L+ A +I++     V+     P  + +++   F+     
Sbjct: 17  LKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVIK---DPSKLPKNTKENFSDLNAR 73

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           IQ  ++   G   +I + F  E      E+F++  L   L+V   + G  F FGK+ + +
Sbjct: 74  IQ--MMANSGVKNIILFDFNTELQQLRGEKFVEIFLK--LQVDFFVVGKNFAFGKNASWN 129

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              LQ+   +    T  I+ L++ + +I S+ N++  L  G   N    L   F I
Sbjct: 130 PEQLQEFFPR----TKIIEHLKDGQKKI-STKNLKLFLEFGDFENLNKFLATNFLI 180


>gi|144227547|gb|AAZ44361.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 278

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           LK  V  +G F+  HLGH  +L+ A +I++     V+     P  + +++   F+     
Sbjct: 14  LKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVIK---DPSKLPKNTKENFSDLNAR 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           IQ  ++   G   +I + F  E      E+F++  L   L+V   + G  F FGK+ + +
Sbjct: 71  IQ--MMANSGVKNIILFDFNTELQQLRGEKFVEIFLK--LQVDFFVVGKNFAFGKNASWN 126

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
              LQ+   +    T  I+ L++ + +I S+ N++  L  G   N    L   F I
Sbjct: 127 PEQLQEFFPR----TKIIEHLKDGQKKI-STKNLKLFLEFGDFENLNKFLATNFLI 177


>gi|221105666|ref|XP_002163807.1| PREDICTED: similar to MGC86418 protein [Hydra magnipapillata]
          Length = 159

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 11/137 (8%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKE-------GVYAIRFRTQDQTSYSGV 241
           F ++ +V+ G   G + LG PTAN    P+I++K+       GVY    R  +   Y  V
Sbjct: 17  FMVQGEVVKGFGRGSKELGIPTANF---PEIVVKDIPSELSAGVYYGWSRVDNGEIYKMV 73

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + G NP        +    + +F  + YG    +    Y+RPE+ F  + +L   +  D
Sbjct: 74  LSIGWNPFYKNEKKSMETHILHEFDSDFYGSTLRIVMTGYIRPELNFGSLTELVDAIKND 133

Query: 302 EKKARKILESSYPLSER 318
              A+  LE S  +S R
Sbjct: 134 IAIAQSSLEKSDHISHR 150


>gi|330891593|gb|EGH24254.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 108

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
            HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7   LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVEL--GVPSCVVIFEPQP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
           R      +    L+    + ++L   G   ++   F       SA  F++
Sbjct: 59  REFFAPETAPARLARLRDKIELLSAEGVDRVLCLSFNQRLCKLSAASFVE 108


>gi|195110613|ref|XP_001999874.1| GI22835 [Drosophila mojavensis]
 gi|193916468|gb|EDW15335.1| GI22835 [Drosophila mojavensis]
          Length = 149

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 192 IESDVIHGEKIG-RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANF 244
           +  +++ G   G + LG PTAN  L  D++      L+ GVY    +  D   Y  V + 
Sbjct: 9   VSGEIVRGFGRGSKELGIPTANFSL--DVVKSLPESLQTGVYYGWAKVNDSEVYKMVLSV 66

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP    N    LE+ I   F+ ++YG+   +    YLRPE  FK ++ L   +  D +
Sbjct: 67  GWNP-FYNNKEKSLETHIMHKFNCDLYGRTLRICIVGYLRPEQNFKSLDDLIKAIKSDIE 125

Query: 304 KARKILESS 312
            A  +L+ +
Sbjct: 126 AATTLLDEA 134


>gi|303287376|ref|XP_003062977.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455613|gb|EEH52916.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 138

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 14/128 (10%)

Query: 196 VIHGEKIG-RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSG----VANF 244
           V++G   G + +G PTAN  L PD+L      +++GVY    R      ++     V N 
Sbjct: 4   VVYGFGRGSKKMGVPTAN--LDPDVLEEELGSMRKGVYFGYARLPADEKHAAWTKCVVNV 61

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G  PT      + +E+    D+ ++ YG+   V    YLRPE+KF  +  L   +  D  
Sbjct: 62  GSRPTFADGDGVTVETHALRDYGRDFYGEDMEVVVVGYLRPEMKFDGMAALVNRIMTDIG 121

Query: 304 KARKILES 311
            AR  L+ 
Sbjct: 122 LARNALDD 129


>gi|83319941|ref|YP_424312.1| riboflavin kinase domain-containing protein [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
 gi|83283827|gb|ABC01759.1| riboflavin kinase (flavokinase) domain protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 184

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSI 77
            ++ IGNFDG H+ H  I+ + I+IA    +T  V+SF+   +  I  ++          
Sbjct: 19  AIITIGNFDGFHIYHQKIINKVIQIAKQENLTSIVMSFDKKIKDNITYTNLATKKQKLDF 78

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
               L  + +   I+   +L     + +QFI  VL+  L V  ++ G  F+FG    G+ 
Sbjct: 79  INNNLSDLDYFFDIKVDDSL--IKTTKDQFID-VLINKLNVIKIVEGQDFKFGYLSQGNI 135

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             L K   K     V I +  N+    +SS+ I+  L +  V  A  LLG
Sbjct: 136 DDLIKAFSK---KNVIIFKRDND----ISSTKIKKLLDENLVDKAQELLG 178


>gi|148228987|ref|NP_001087452.1| riboflavin kinase [Xenopus laevis]
 gi|50927273|gb|AAH79807.1| MGC86418 protein [Xenopus laevis]
          Length = 154

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN       +L  DI    G+Y    +  +   Y  V + G NP        +
Sbjct: 21  KELGIPTANFAEKIVDRLPADI--STGIYYGWGQVGNGEVYKMVMSIGWNPFYKNTKKSM 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
               I +F ++ YG+  ++    Y+RPE  F  ++ L   +  D ++A+K LE     + 
Sbjct: 79  ETHIIHEFDKDFYGEILSIVIAGYIRPEKSFDSLDALISAIHSDIEEAKKQLELPEFQAL 138

Query: 318 RDRIIC 323
           RDR  C
Sbjct: 139 RDRFFC 144


>gi|301111498|ref|XP_002904828.1| riboflavin kinase [Phytophthora infestans T30-4]
 gi|262095158|gb|EEY53210.1| riboflavin kinase [Phytophthora infestans T30-4]
          Length = 149

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 5/126 (3%)

Query: 192 IESDVIHG-EKIGRTLGFPTANMQLSP--DIL--LKEGVYAIRFRTQDQTSYSGVANFGR 246
           +++ V+ G  + G+ LG PTAN+      D+L  L  G+Y        +  Y  VA+ G 
Sbjct: 12  LQATVVEGFGRGGKQLGCPTANLSSKDLGDLLEQLPTGIYCGWATVDGKGPYKAVASIGW 71

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NP        +    +  F ++ YG +       Y+RPE+ F  +E L   + +D  ++ 
Sbjct: 72  NPYFKNKEKTVEPHLLHKFDKDFYGAQLKFLITGYIRPEMNFSSLESLIKAIQDDIAQSN 131

Query: 307 KILESS 312
           + L+++
Sbjct: 132 EWLDTT 137


>gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+       LL E   GVY        Q  Y  V + G NP        +  
Sbjct: 254 KVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + L+
Sbjct: 314 WLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERALD 364


>gi|225466457|ref|XP_002268247.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 230

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANF 244
           + I   VI G   G + LG PTAN+       LL E   GVY        Q  Y  V + 
Sbjct: 81  WYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSI 140

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    + +F ++ YG+   +    Y+RPE  F  +E L   + ED + 
Sbjct: 141 GWNPYFNNTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRI 200

Query: 305 ARKILE 310
           A + L+
Sbjct: 201 AERALD 206


>gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+       LL E   GVY        Q  Y  V + G NP        +  
Sbjct: 254 KVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + L+
Sbjct: 314 WLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERALD 364


>gi|296775760|gb|ADH43029.1| FAD synthase [uncultured SAR11 cluster alpha proteobacterium
           H17925_45G17]
          Length = 158

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 23/147 (15%)

Query: 196 VIHGEKIG-RTLGFPTANMQL---SPDILLKE--------------GVYAIRFRTQDQTS 237
           ++HG   G + LGFPTANM++     +  L E              G+YA     +   S
Sbjct: 1   MVHGFGRGSKQLGFPTANMEIKWGDDESTLSEEEKAVYKFAKESPTGIYACYAVIEGPES 60

Query: 238 YSGV----ANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             GV     + G NPT        +E +I  DFS++ Y     +    Y+R E+KF+D E
Sbjct: 61  CRGVHKVAMSMGWNPTFTDVKAKTIEPWILHDFSEDFYDCPLRLLVVAYVRDELKFEDFE 120

Query: 293 KLKIYMGEDEKKARKILESSYPLSERD 319
           +LK  +  D     + L+     + RD
Sbjct: 121 QLKREIAADGDYCNEALDKPELAALRD 147


>gi|325188197|emb|CCA22738.1| riboflavin kinase putative [Albugo laibachii Nc14]
          Length = 153

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 192 IESDVIHG-EKIGRTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANF 244
           +++ V+ G  + G+ LG PTAN  LS + L      L  G+Y           Y  VA+ 
Sbjct: 13  LQAKVVEGFGRGGKQLGCPTAN--LSREDLGEKLEQLSTGIYCGWATVNGHGPYKAVASI 70

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    +  F ++ YG    +    YLRPE+ F  +E L   +  D K+
Sbjct: 71  GWNPYFKNEVKTVEPHLLHHFEEDFYGATLKLLICGYLRPEMNFPSLESLITAIQNDIKQ 130

Query: 305 ARKILESS 312
           +   L+ +
Sbjct: 131 SEVWLDQT 138


>gi|195036792|ref|XP_001989852.1| GH19022 [Drosophila grimshawi]
 gi|193894048|gb|EDV92914.1| GH19022 [Drosophila grimshawi]
          Length = 152

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 204 RTLGFPTANMQ----LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      S    L  GVY       +   +  V + G NP    N    +E
Sbjct: 22  KELGIPTANLAHEVVKSLPAALHTGVYYGWASVNNGDVHKMVLSVGWNP-FYNNKEKSVE 80

Query: 260 SFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + I  +++ ++YGQ   +    YLRPE  F  +E L   +  D +KA+ +LE+
Sbjct: 81  THIMHNYNCDLYGQMLKICITGYLRPEQNFDSVEALIAVIKSDIEKAKTMLET 133


>gi|302810878|ref|XP_002987129.1| hypothetical protein SELMODRAFT_125384 [Selaginella moellendorffii]
 gi|300145026|gb|EFJ11705.1| hypothetical protein SELMODRAFT_125384 [Selaginella moellendorffii]
          Length = 372

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM-------QLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           + I   VI G   G + LG PTAN+       QL+  +    G+Y    R  D+  +  V
Sbjct: 232 WYISGPVIRGFGRGSKVLGIPTANLPTGAFSKQLAEQVC---GIYLGWARLSDKGVFKMV 288

Query: 242 ANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + E
Sbjct: 289 MSVGWNPYF-DNAEKTVEPWLLHEFPEDFYGEELRLIVVGYIRPEANFSSLEDLINKIHE 347

Query: 301 DEKKARKILE 310
           D + A+  L+
Sbjct: 348 DGRIAKAALD 357


>gi|303278446|ref|XP_003058516.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459676|gb|EEH56971.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 335

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 36/244 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +VA+G FD +H GH  +   A+     +P  V SF      +    +P   +     +E+
Sbjct: 39  IVALGKFDAMHRGHARL--AAVAAGMGAPYLV-SFGGMAEVL--GWTPTLPVVATEDRER 93

Query: 81  ILEKMGFSALIRYKFTLETANYSA------EQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           + E      L+  +       ++A      E+F++   ++ + V  V+ G  +RFG   A
Sbjct: 94  VCELWRAEGLVSRELREHAIPFAAIRRMSPEEFVKT--LKDIGVGGVVAGRNYRFGFKAA 151

Query: 135 GDRGILQKRGEKYGFHTVFID----------ELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           G    L   GEK       +D          +     +  VSS+ +R  L  G V     
Sbjct: 152 GTADTLVDLGEKLDVDVSIVDLLPADIEEDFDCPGGCTPQVSSTRVRACLAAGDVEQCNA 211

Query: 185 LLG--YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE------GVYAIRFRTQDQT 236
           LLG  +R  +  D +  +     + F  ++ +++  +          GVYA+R   ++  
Sbjct: 212 LLGRPHRLVMSVDDVAAD-----VSFDASDTEIAFALASARNQYPAPGVYAVRAAMREIV 266

Query: 237 SYSG 240
             +G
Sbjct: 267 EIAG 270


>gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNP-------TMVP 252
           + LG PTAN+       LL E   GVY        Q  Y  V + G NP       T+V 
Sbjct: 749 KVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIVS 808

Query: 253 NGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               + E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + L+
Sbjct: 809 ATWTVKEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERALD 867


>gi|302788909|ref|XP_002976223.1| hypothetical protein SELMODRAFT_105011 [Selaginella moellendorffii]
 gi|300155853|gb|EFJ22483.1| hypothetical protein SELMODRAFT_105011 [Selaginella moellendorffii]
          Length = 372

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM-------QLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           + I   VI G   G + LG PTAN+       QL+  +    G+Y    R  D+  +  V
Sbjct: 232 WYISGPVIRGFGRGSKVLGIPTANLPTGAFSKQLAEQVC---GIYLGWARLSDKGVFKMV 288

Query: 242 ANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + E
Sbjct: 289 MSVGWNPYF-DNAEKTVEPWLLHEFPEDFYGEELRLIVVGYIRPEANFSSLEDLINKIHE 347

Query: 301 DEKKARKILE 310
           D + A+  L+
Sbjct: 348 DGRIAKAALD 357


>gi|159463528|ref|XP_001689994.1| riboflavin kinase [Chlamydomonas reinhardtii]
 gi|158283982|gb|EDP09732.1| riboflavin kinase [Chlamydomonas reinhardtii]
          Length = 399

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 31/156 (19%)

Query: 180 LNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIR--------- 229
           L A + L     +   V+ G   G R +G PTAN++     L+KE + +++         
Sbjct: 238 LPAHYRLRTPLALRGKVVKGYGRGSRQMGTPTANIETG---LVKEALASMKPGVYFGWAK 294

Query: 230 ------FRTQDQTSYSGVANFGRNPTM-----VPNGPLLLESFI---FDFSQEIYGQRCT 275
                 + + D   +  V N G  PT+      P+    LE  I   F+  QE YG    
Sbjct: 295 LNPPHGWPSVDSDVHKMVLNVGSRPTVNKGDEAPS----LECHILHHFEGGQEFYGSELE 350

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           V    +LRPEIKF  ++ L   +  D   AR  LE+
Sbjct: 351 VLVLGFLRPEIKFGSVDALVSRIRADIATARVQLEA 386


>gi|331703346|ref|YP_004400033.1| riboflavin kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801901|emb|CBW54054.1| Riboflavin kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 184

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+      I+++     L+  
Sbjct: 17  KKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFDKK----IKNNKTYTNLATK 72

Query: 76  SIQ-EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + E I  K+      I  K        + +QFI  +L+  L V  ++ G  F FG   
Sbjct: 73  KQKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLNKLNVIKIVEGQDFTFGYLS 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            G+   L +   K     V I +  N+    +SS+ I+  L +  V  A  LLG
Sbjct: 132 QGNINDLIRVFSK---ENVIIFKRDND----ISSTKIKKLLDENLVDKAQELLG 178


>gi|194899378|ref|XP_001979237.1| GG24851 [Drosophila erecta]
 gi|190650940|gb|EDV48195.1| GG24851 [Drosophila erecta]
          Length = 153

 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   Y  V + G NP        +  
Sbjct: 22  KELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVYKMVLSVGWNPFYNNKEKSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   + ED ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQILKICIVGYLRPERSFDSLEALIAAIREDIEQAKAFLDEA 134


>gi|42560884|ref|NP_975335.1| riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492381|emb|CAE76977.1| Riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301321035|gb|ADK69678.1| riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 184

 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+      I+++     L+  
Sbjct: 17  KKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFDKK----IKNNKTYTNLATK 72

Query: 76  SIQ-EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + E I  K+      I  K        + +QFI  +L+  L V  ++ G  F FG   
Sbjct: 73  KQKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLSKLNVIKIVEGQDFTFGYLS 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            G+   L +   K     V I +  N+    +SS+ I+  L +  V  A  LLG
Sbjct: 132 QGNINDLIRVFSK---ENVIIFKRDND----ISSTKIKKLLDENLVDKAQELLG 178


>gi|226491025|ref|NP_001146905.1| haloacid dehalogenase-like hydrolase domain-containing protein 1A
           [Zea mays]
 gi|195604978|gb|ACG24319.1| haloacid dehalogenase-like hydrolase domain-containing protein 1A
           [Zea mays]
          Length = 398

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D++ +   GVY        +  Y  V + G NP        +  
Sbjct: 254 KVLGIPTANLPAENFSDVVSEHTSGVYFGWAGLSTRGIYKMVMSIGWNPYFDNTEKTVEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + DF ++ YG+   ++   Y+RPE  F  +E L   + ED + A K L+
Sbjct: 314 WLLHDFGEDFYGEEVRLAIVGYIRPEANFPSLESLIERIHEDGRVAEKALD 364


>gi|308492850|ref|XP_003108615.1| hypothetical protein CRE_10924 [Caenorhabditis remanei]
 gi|308248355|gb|EFO92307.1| hypothetical protein CRE_10924 [Caenorhabditis remanei]
          Length = 160

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 184 HLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTS 237
            +L Y F  E +V+ G  + G+ LG PTANM  +     PD  LK GVY  +   +  T 
Sbjct: 27  QILPYHF--EGEVVRGFGRGGKELGCPTANMDDTVIENLPD-GLKVGVYYGKATFKGNT- 82

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           YS   + G NP    N    +E  + D++  + YG+R +     Y+R    F  +E+LK 
Sbjct: 83  YSMAMSVGWNP-QYHNEKKTVEVHLIDYAGGDFYGKRLSAVIVGYIRDMRSFASLEELKT 141

Query: 297 YMGEDEKKARK 307
            + +D + AR+
Sbjct: 142 AIAKDIEIARR 152


>gi|3080391|emb|CAA18711.1| putative protein [Arabidopsis thaliana]
 gi|7268944|emb|CAB81254.1| putative protein [Arabidopsis thaliana]
          Length = 282

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D L++   GVY        +  +  V + G NP        +  
Sbjct: 157 KVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTIEP 216

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + DF+++ YG+   +    Y+RPE  F  +E L   + ED + A K L+
Sbjct: 217 WLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKALD 267


>gi|195157380|ref|XP_002019574.1| GL12140 [Drosophila persimilis]
 gi|198454978|ref|XP_001359802.2| GA15482 [Drosophila pseudoobscura pseudoobscura]
 gi|194116165|gb|EDW38208.1| GL12140 [Drosophila persimilis]
 gi|198133040|gb|EAL28954.2| GA15482 [Drosophila pseudoobscura pseudoobscura]
          Length = 155

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 204 RTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + LG PTAN  L      P+ LL  GVY           +  V + G NP        + 
Sbjct: 22  KELGIPTANFPLEVVKSLPESLLT-GVYYGWANVDSGPVHKMVLSVGWNPFYNNTEKSVE 80

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              + +F+ ++YGQ   +    YLRPE  F  +E L   +  D + A+  LES
Sbjct: 81  THMLHEFNCDLYGQLLKICIVGYLRPEKSFDSLEALITAIKADIEHAKAHLES 133


>gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa]
 gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa]
          Length = 381

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 12/115 (10%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNP----TMVPNGP 255
           + LG PTAN+       LL E   GVY        Q  Y  V + G NP    T     P
Sbjct: 253 KVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSSQGLYKMVMSIGWNPYFNNTEKTIEP 312

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            LL  F  DF    YG+   +    Y+RPE  F  +E L   + ED + A + L+
Sbjct: 313 WLLHEFDGDF----YGEELRLVVVGYIRPEANFSSLESLIAKIHEDRRIAERALD 363


>gi|62858727|ref|NP_001016959.1| riboflavin kinase [Xenopus (Silurana) tropicalis]
 gi|89266925|emb|CAJ82257.1| riboflavin kinase [Xenopus (Silurana) tropicalis]
          Length = 154

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN       +L  DI    G+Y    +  +   +  V + G NP        +
Sbjct: 21  KELGIPTANFAEKIVDRLPADI--STGIYYGWGQVGNGEVHKMVMSIGWNPFYKNTKKSM 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
               I D+ ++ YG+  ++    Y+RPE  F  ++ L   +  D ++A+K LE     + 
Sbjct: 79  ETHIIHDYMKDFYGEILSIVIAGYIRPEKSFDSLDALISAIYSDIEEAKKRLELPEYQAL 138

Query: 318 RDRIIC 323
           RDR  C
Sbjct: 139 RDRFFC 144


>gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula]
          Length = 377

 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANF 244
           + I   VI G   G + LG PTAN+      D+L +   GVY        +  +  V + 
Sbjct: 236 WYIGGPVIKGFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSI 295

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    + +F+++ YG+   +    Y+RPE+ F  +E L   + ED + 
Sbjct: 296 GWNPYFNNKEKTIEPWLLHEFTEDFYGEELKLVIVGYIRPEVNFPTLESLIAKIHEDRRV 355

Query: 305 ARKILESSYPLSERD 319
           A   LE     S +D
Sbjct: 356 AESALELPMYSSHKD 370


>gi|87240728|gb|ABD32586.1| Riboflavin kinase / FAD synthetase [Medicago truncatula]
          Length = 237

 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLS--PDILLKE--GVYAIRFRTQDQTSYSGVANF 244
           + I   VI G   G + LG PTAN+      D+L +   GVY        +  +  V + 
Sbjct: 96  WYIGGPVIKGFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSI 155

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    + +F+++ YG+   +    Y+RPE+ F  +E L   + ED + 
Sbjct: 156 GWNPYFNNKEKTIEPWLLHEFTEDFYGEELKLVIVGYIRPEVNFPTLESLIAKIHEDRRV 215

Query: 305 ARKILESSYPLSERD 319
           A   LE     S +D
Sbjct: 216 AESALELPMYSSHKD 230


>gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata]
 gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D L++   GVY        +  +  V + G NP        +  
Sbjct: 254 KVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + DF+++ YG+   +    Y+RPE  F  +E L   + ED + A K L+
Sbjct: 314 WLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKALD 364


>gi|195392385|ref|XP_002054838.1| GJ24661 [Drosophila virilis]
 gi|194152924|gb|EDW68358.1| GJ24661 [Drosophila virilis]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN+ L  D++      L  GVY       +   Y  V + G NP        +
Sbjct: 22  KELGIPTANLSL--DVVKSLPESLHTGVYYGWSNVNNGEVYKMVLSVGWNPFYNNKEKSV 79

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F  ++YGQ   +    YLRPE  F  ++ L   +  D ++A+ +L+
Sbjct: 80  ETHMLHKFDCDLYGQTLKICIVGYLRPEKNFDSLDDLIKVIKSDIEQAKTLLD 132


>gi|42567011|ref|NP_193878.2| ATFMN/FHY (riboflavin kinase/FMN hydrolase); FMN
           adenylyltransferase/ riboflavin kinase [Arabidopsis
           thaliana]
 gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana]
 gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana]
 gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana]
 gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana]
          Length = 379

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D L++   GVY        +  +  V + G NP        +  
Sbjct: 254 KVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + DF+++ YG+   +    Y+RPE  F  +E L   + ED + A K L+
Sbjct: 314 WLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKALD 364


>gi|255083589|ref|XP_002508369.1| predicted protein [Micromonas sp. RCC299]
 gi|226523646|gb|ACO69627.1| predicted protein [Micromonas sp. RCC299]
          Length = 434

 Score = 44.3 bits (103), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 204 RTLGFPTANMQ---LSPDI-LLKEGVY---AIRFRTQDQTSYS-GVANFGRNPTMVPNGP 255
           + +G PTANM    L+P +  ++ GVY   A      D  S+S  V N G+ PT      
Sbjct: 302 KQMGTPTANMDPTVLAPQLERMRRGVYFGFARLPDDPDNDSWSKCVINVGQRPTFADGDG 361

Query: 256 LLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E  +     ++ YG+        YLRPE++FK + +L   +  D   AR  L++
Sbjct: 362 VTIEVHVMRLMGRDFYGETMECVALGYLRPEMRFKGLRELVGRIMTDIGLARNALDA 418


>gi|145341116|ref|XP_001415661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575884|gb|ABO93953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 289

 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 6/120 (5%)

Query: 196 VIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           V+ G   G T LG PTAN+ + P       L  G+Y + F +    ++  V + G NP  
Sbjct: 158 VVKGFGRGSTQLGIPTANLDIVPLKHQVDSLAPGIY-LGFASIRGETHKMVMSIGWNPYF 216

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +   +    + +F  + YG+  ++    Y+RPE  F  +E L   +  D + AR +LE
Sbjct: 217 DNSKKTIEPWLLHEFESDFYGEELSLVVVGYIRPEADFTTLEALVERIHRDAEVARVVLE 276


>gi|82913424|ref|XP_728638.1| virulence factor MVIN [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485091|gb|EAA20203.1| Virulence factor MVIN, putative [Plasmodium yoelii yoelii]
          Length = 1197

 Score = 44.3 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 7/60 (11%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHPRTII-QSSSP 68
           P HL     AIGNFDG+HLGH  ++    EQ  ++    P+ ++ F P PR    Q  SP
Sbjct: 494 PRHLLLSEKAIGNFDGVHLGHQTLVRRLTEQGHRLG--LPVALVLFEPQPREFFDQDQSP 551


>gi|159466268|ref|XP_001691331.1| riboflavin kinase [Chlamydomonas reinhardtii]
 gi|158279303|gb|EDP05064.1| riboflavin kinase [Chlamydomonas reinhardtii]
          Length = 421

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 192 IESDVIHGEKIG-RTLGFPTANMQLSPDILLKE------GVYAIRFRT-QDQTSYSGVAN 243
           +  +V+ G   G + LG PTAN+   P  + K       G+YA   R  Q    +  V +
Sbjct: 263 LRGEVVKGFGRGSKELGIPTANV--CPAAVAKHLAEAVTGIYAGWARVGQRPEIHKTVLS 320

Query: 244 FGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    LE +I  DF Q  YG+  ++    Y+RPE  F  +E L   +  D 
Sbjct: 321 IGWNPFFA-NKEKTLEPWILADFDQPFYGETLSLVICGYVRPEANFSSLEDLVARIHADA 379

Query: 303 KKARKILES 311
             +R  L+ 
Sbjct: 380 DVSRAALDC 388


>gi|242037125|ref|XP_002465957.1| hypothetical protein SORBIDRAFT_01g048850 [Sorghum bicolor]
 gi|241919811|gb|EER92955.1| hypothetical protein SORBIDRAFT_01g048850 [Sorghum bicolor]
          Length = 396

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D++ +   GVY        +  Y  V + G NP        +  
Sbjct: 253 KVLGIPTANLPAENFADVVSEHTSGVYFGWAGLSTRGIYKMVMSIGWNPYFDNTEKTVEP 312

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + +F ++ YG+   ++   Y+RPE  F  +E L   + ED K A K L+
Sbjct: 313 WLLHNFGEDFYGEELRLAIVGYIRPEANFPSLESLIERIHEDGKIAEKALD 363


>gi|256072934|ref|XP_002572788.1| riboflavin kinase/fmn adenylyltransferase [Schistosoma mansoni]
 gi|238657953|emb|CAZ29020.1| riboflavin kinase/fmn adenylyltransferase, putative [Schistosoma
           mansoni]
          Length = 154

 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 15/148 (10%)

Query: 187 GYRFTIESDVIHGEKIG-RTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSYSG 240
           G  F     V+HG   G + LG PTAN++ S     PD   K G+Y    +  +   Y  
Sbjct: 8   GALFYASGKVVHGFGRGSKQLGIPTANLEESIVSEIPD-STKNGIYFGWAKLSNTPVYKM 66

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V + G NP        +    +  F +  YG    V    Y RPE  F  IE L   +  
Sbjct: 67  VMSIGWNPYFKNIKRSVEVHILHRFEENFYGDTIKVIAVKYFRPEYDFPSIEDLIKQIHT 126

Query: 301 DEKKARKILESSYPL--------SERDR 320
           D  +A   L+ S  L        +E+DR
Sbjct: 127 DISEANLFLDKSEALLWSKHDLFNEKDR 154


>gi|294155455|ref|YP_003559839.1| riboflavin kinase [Mycoplasma crocodyli MP145]
 gi|291600517|gb|ADE20013.1| riboflavin kinase [Mycoplasma crocodyli MP145]
          Length = 286

 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 104/224 (46%), Gaps = 26/224 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  +G+F+ +HLGH+ + +      NN P    V+ F  +   + + ++  F+     + 
Sbjct: 24  VFVLGSFESLHLGHYELFKHTF---NNYPNHNKVIVFFNNDSNMAKFNNEFFSDQKTRLN 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +  + ++GF A I   FT +   +SA++FI+K  +   +    I G  F+FG +      
Sbjct: 81  Q--ISQIGFDAGIALDFT-KVKQFSAQEFIEK--IAQGQKSIFIAGEDFKFGHNALSTVD 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++      Y   ++ + ++ N+K   +S+S ++  +  G +      L + ++I +++ H
Sbjct: 136 LINTFNNNYKSISIPVFKINNSK---LSTSKLKDHIEFGDIAILNSYLLFDYSINTNLKH 192

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGV 241
             +           +++  +I  L  G+YA+R    +  SY G+
Sbjct: 193 NLE-----------LEICQNIKKLHSGIYAVRVDF-NNFSYFGI 224


>gi|302850271|ref|XP_002956663.1| hypothetical protein VOLCADRAFT_107321 [Volvox carteri f.
           nagariensis]
 gi|300258024|gb|EFJ42265.1| hypothetical protein VOLCADRAFT_107321 [Volvox carteri f.
           nagariensis]
          Length = 394

 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 16/124 (12%)

Query: 204 RTLGFPTANMQLSP--DIL--LKEGVY--------AIRFRTQDQTSYSGVANFGRNPTMV 251
           R LG PTAN+  +P    L  +  GVY         + +   D   +  V N G  PT+ 
Sbjct: 253 RQLGTPTANIDPAPLRRTLGGMPPGVYFGWAKLEAPVGWPAGDSNVHKAVLNIGSRPTVN 312

Query: 252 PNG--PLLLESFIFDF--SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             G  P +    + +F   +E YG    V    +LRPEI+F  +E L   +  D   AR 
Sbjct: 313 KGGEAPSVEVHILHEFQGGEEFYGSHLEVLVVGFLRPEIRFSGVETLLARIRTDTAIARL 372

Query: 308 ILES 311
            L++
Sbjct: 373 QLDT 376


>gi|256383932|gb|ACU78502.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384764|gb|ACU79333.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455432|gb|ADH21667.1| riboflavin kinase (Flavokinase) [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 184

 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+   + I  + +     +  
Sbjct: 17  KKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFD---KKIKNNKTHTNLATKK 73

Query: 76  SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              E I  K+      I  K        + +QFI  +L+  L V  ++ G  F FG    
Sbjct: 74  QKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLNKLNVIKIVEGQDFTFGYLSQ 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           G+   L +   K     V I +  N+    +SS+ I+  L +  V  A  LLG
Sbjct: 133 GNINDLIRVFSK---ENVIIFKRDND----ISSTKIKKLLDENLVDKAQELLG 178


>gi|4379138|emb|CAA83734.1| similar protein X in RPST-ILES region [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 70

 Score = 43.9 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 32/54 (59%)

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + E++IF+FS +IY  + T    DY+R   K   +++LK  +  D+K+  K +E
Sbjct: 13  VFETYIFNFSNDIYNSKITFELLDYIRDNQKINSLDQLKTLLNNDKKECLKRME 66


>gi|125531419|gb|EAY77984.1| hypothetical protein OsI_33028 [Oryza sativa Indica Group]
          Length = 301

 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D+L +   GVY        +  Y  V + G NP        +  
Sbjct: 158 KVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIYKLVMSIGWNPYFDNTEKTIEP 217

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + DF ++ YG+   +    Y+RPE  F  +E L   + ED + A K L
Sbjct: 218 WLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARIAEKAL 267


>gi|84393570|ref|ZP_00992323.1| hypothetical protein V12B01_08762 [Vibrio splendidus 12B01]
 gi|84375779|gb|EAP92673.1| hypothetical protein V12B01_08762 [Vibrio splendidus 12B01]
          Length = 116

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
          G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P P
Sbjct: 16 GCVLTIGNFDGVHLGHQEVLSQVSKQAAALGLPSVVMTFEPQP 58


>gi|308457605|ref|XP_003091175.1| hypothetical protein CRE_15042 [Caenorhabditis remanei]
 gi|308258129|gb|EFP02082.1| hypothetical protein CRE_15042 [Caenorhabditis remanei]
          Length = 135

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 184 HLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTS 237
            +L Y F  E +V+ G  + G+ LG PTANM  +     P+  LK GVY  +   +  T 
Sbjct: 2   QILPYHF--EGEVVRGFGRGGKELGCPTANMDDTVIENLPE-GLKVGVYYGKATFKGNT- 57

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           YS   + G NP    N    +E  + D++  + YG+R +     Y+R    F  +E+LK 
Sbjct: 58  YSMAMSVGWNP-QYHNEKKTVEVHLIDYAGGDFYGKRLSAVIVGYIRDMRSFASLEELKT 116

Query: 297 YMGEDEKKARK 307
            + +D + AR+
Sbjct: 117 AIAKDIEIARR 127


>gi|313638982|gb|EFS03996.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
          seeligeri FSL S4-171]
          Length = 60

 Score = 43.5 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 20 GVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHP 59
           V+ IG FDG+H+GH  IL  A+ +     I T +SF+PHP
Sbjct: 17 AVLTIGKFDGVHIGHQKILNTALSLKKPDEILTAISFSPHP 57


>gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa]
 gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa]
          Length = 382

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 12/124 (9%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNP----TMVPNGP 255
           + LG PTAN+       LL E   GVY        +  Y  V + G NP    T     P
Sbjct: 254 KVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEP 313

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            LL  F  DF    YG+   +    Y+RPE  F  +E L   + ED + A + L+    L
Sbjct: 314 WLLHEFDGDF----YGEELRLVIVGYIRPEANFTTLESLIAKIHEDRRIAERALDIPLYL 369

Query: 316 SERD 319
             +D
Sbjct: 370 KYKD 373


>gi|308799797|ref|XP_003074679.1| Riboflavin kinase (ISS) [Ostreococcus tauri]
 gi|116000850|emb|CAL50530.1| Riboflavin kinase (ISS) [Ostreococcus tauri]
          Length = 168

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKE--------GVYAIR 229
           V+ +A  +   F +E+ V+ G   G + +G PTAN  L P++   E        GVY   
Sbjct: 13  VVPSAFEIAKPFVLEAPVVTGFGRGSKQMGVPTAN--LDPELCGGEAFLSSLPLGVYFGW 70

Query: 230 FRTQDQTSY-SGVANFGRNPTMVPNGPLLLESFIFD-------FSQEIYGQRCTVSFFDY 281
            +   ++S+   V N G+ PT V      +E  +         + ++ YG+   V    +
Sbjct: 71  AKLAMESSWHECVLNVGKRPTFVDGDGATIEVHVMGASDAAKLYERDFYGETMRVEVRGF 130

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +RPE++F+ + +L   +  D   AR  L S
Sbjct: 131 IRPEMRFESLPELVTRIRADIGLARNALAS 160


>gi|289674845|ref|ZP_06495735.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Pseudomonas syringae pv. syringae FF5]
          Length = 75

 Score = 42.7 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 12/61 (19%)

Query: 4  FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL----EQAIKIANNSPITVLSFNPHP 59
           HN+      P H +G V  IGNFDG+H GH  IL    E+A+++    P  V+ F P P
Sbjct: 7  LHNLR-----PEH-RGCVATIGNFDGVHRGHQAILARLRERAVELG--VPSCVVIFEPQP 58

Query: 60 R 60
          R
Sbjct: 59 R 59


>gi|294460313|gb|ADE75738.1| unknown [Picea sitchensis]
          Length = 382

 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM---QLSPDILLKE-GVYAIRFRTQDQTSYSGVANF 244
           + I   VI G   G + LG PTAN+   +LS  +  +  GVY        +  Y  V + 
Sbjct: 238 WYIGGPVIKGFGRGSKILGIPTANLSADELSSTLAQQACGVYLGWAGLSTRGIYKMVMSI 297

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    + +F ++ YG+   +    Y+RPE KF  +E L   + ED + 
Sbjct: 298 GWNPFFDNTKKTIEPWLLHEFDEDFYGEELRLVVVGYIRPEAKFPSLEALIEKIHEDRRI 357

Query: 305 ARKILE 310
           A + L+
Sbjct: 358 AEEALD 363


>gi|323449805|gb|EGB05690.1| hypothetical protein AURANDRAFT_30516 [Aureococcus anophagefferens]
          Length = 175

 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 196 VIHGEKIGRT-LGFPTANMQLSP----DILLKE-------------GVYAIRFRTQ---D 234
           V+HG   G   LGFPTAN+ ++     D L  E             G+YA   +     D
Sbjct: 25  VVHGFGRGSAQLGFPTANLAINWAEQLDTLTDEERDVRRFVDENRTGIYAAWAQVASGAD 84

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +  Y    + G NP         +E+++  DF  + Y QR  +    Y+RPE+KF   ++
Sbjct: 85  RGVYKVAMSVGWNPHFGDLERKTIEAWLLHDFEADFYDQRLKLVVVGYVRPELKFDSFDE 144

Query: 294 L 294
           L
Sbjct: 145 L 145


>gi|308126668|ref|ZP_07663851.1| riboflavin kinase [Vibrio parahaemolyticus AQ4037]
 gi|308107961|gb|EFO45501.1| riboflavin kinase [Vibrio parahaemolyticus AQ4037]
          Length = 79

 Score = 42.7 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 8/57 (14%)

Query: 5  HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
          HNI      P+H  G V+ IGNFDG+H GH  +L+Q  + A   + P  V++F P P
Sbjct: 8  HNIA-----PHHY-GCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQP 58


>gi|156546795|ref|XP_001605830.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
          Length = 148

 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           ++LG PTAN  LS +I+       + G+Y   + + ++T Y  V + G NP    +   +
Sbjct: 24  KSLGCPTAN--LSEEIVEALPSEFETGIY-YGWASLEKTIYKMVMSIGWNPFYKNDKKSM 80

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
               +  F  + YG+   V    Y+RPE+ F  +++L   + +D + A K L+ +
Sbjct: 81  EIHLLHKFEDDFYGKELKVIVLGYIRPELNFSSVDQLIKAINKDIEVADKSLDEA 135


>gi|226329208|ref|ZP_03804726.1| hypothetical protein PROPEN_03111 [Proteus penneri ATCC 35198]
 gi|225202394|gb|EEG84748.1| hypothetical protein PROPEN_03111 [Proteus penneri ATCC 35198]
          Length = 112

 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V+ IGNFDG+H GH  +L+   + A+    P  V++F P P            L+   
Sbjct: 16  GCVLTIGNFDGVHRGHQALLKHLKQEASQRGLPTVVMTFEPQPLEFFLPEKAPARLTRLR 75

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQ 106
            + K L + G   L+  KF  + A  + ++
Sbjct: 76  DKIKYLAECGIDYLLCVKFDKQFAAQTPQR 105


>gi|168026625|ref|XP_001765832.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683009|gb|EDQ69423.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 396

 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 204 RTLGFPTANMQLSP--DILLKE--GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+  S   + L     G+Y       ++  Y  V + G NP    N    +E
Sbjct: 262 KLLGTPTANLPTSAFSNHLASHVCGIYIGWAGLANRGVYKMVMSVGWNPYF-DNKEKAVE 320

Query: 260 SFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +I  DFS++ YG+   +    Y+RPE  F  +E L   + ED + A+  L+
Sbjct: 321 PWILHDFSEDFYGEELRLIVVGYVRPEANFTTLEDLVERIHEDGRVAKAALD 372


>gi|195445599|ref|XP_002070399.1| GK11049 [Drosophila willistoni]
 gi|194166484|gb|EDW81385.1| GK11049 [Drosophila willistoni]
          Length = 152

 Score = 42.4 bits (98), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN  L  D++      L  GVY       +   +  V + G NP        +
Sbjct: 22  KELGIPTANYPL--DVVKSLPESLPTGVYYGWANVDNGPVHKMVLSIGWNPFYNNTEKSV 79

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               + +F+ ++YGQ   +    YLRPE  F  +E L   +  D  +A+++L +
Sbjct: 80  ETHMLHEFNCDLYGQILKICMVGYLRPERSFDSLEALITAIKTDIDQAKELLST 133


>gi|262364546|gb|ACY61103.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D182038]
          Length = 102

 Score = 42.4 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 223 EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
           +GVYA+       T   GVAN G  PT V      LE  + D + ++YG    V     L
Sbjct: 11  KGVYAVDVYGLGSTPLYGVANIGTRPT-VAGVRQQLEVHLLDVTMDLYGCHIDVVLRAKL 69

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           R E +F  +E LK  +  D   AR       P+
Sbjct: 70  RNEQRFASLEALKQQIANDVVTARTFFGLKTPV 102


>gi|289742591|gb|ADD20043.1| riboflavin kinase [Glossina morsitans morsitans]
          Length = 165

 Score = 42.4 bits (98), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 196 VIHGEKIGRT-LGFPTANMQL----SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           ++ G + G + LG PTAN  L    S     K G+Y       +   Y  V + G NP  
Sbjct: 13  IVEGFRRGSSELGVPTANYPLEVVKSLPGCFKTGIYYGWANVDNGPVYKMVMSIGWNP-F 71

Query: 251 VPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             N    +E+ I  DF+ ++YG         +LRPE  F  +E L   + +D+  A+ +L
Sbjct: 72  YNNKEKSMETHILHDFACDLYGSLLKTCIAGFLRPEKDFDSLEDLIRAVQDDKSLAKDLL 131

Query: 310 ES 311
           ++
Sbjct: 132 DA 133


>gi|328862978|gb|EGG12078.1| hypothetical protein MELLADRAFT_102002 [Melampsora larici-populina
           98AG31]
          Length = 170

 Score = 42.4 bits (98), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIR 229
           R+ + K H     +L  Y   + S+V+ G   G + L  PTAN  L+P +L  +    +R
Sbjct: 25  RSLILKSH---QPNLSIYPICLSSNVLKGFGRGSKELNCPTAN--LNPKVLEDQSKEYLR 79

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
               +Q  +  V + G NP        +    +F+F Q+ YG    V    Y+RPE  + 
Sbjct: 80  ----NQNVFEMVMSIGFNPVYGNEFKTIEVHVLFEFDQDFYGVEMKVMVLGYIRPEYNYT 135

Query: 290 DIEKLKIYMGEDEKKARKILE 310
             ++L   +  D++ A+  L+
Sbjct: 136 TKDELITDIEIDKQVAKNTLK 156


>gi|313634315|gb|EFS00925.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
          seeligeri FSL N1-067]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHP 59
          +  V+ IG FDG+H+GH  IL  A+ +     I T +SF+PHP
Sbjct: 15 RPAVLTIGKFDGVHIGHQKILNTALSLKKPDEILTAISFSPHP 57


>gi|189536414|ref|XP_689407.3| PREDICTED: riboflavin kinase [Danio rerio]
          Length = 163

 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y    R  +   +  V + G NP        +
Sbjct: 21  KDLGIPTANFPESVVDSLPTDI--STGIYYGWARLDNGDIHKMVMSIGWNPYYKNTKKSM 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I  F ++ YG   +V+   Y+RPE  F  +++L   +  D ++A+K L+
Sbjct: 79  EAHVIHTFKEDFYGHILSVAMAGYIRPERGFTSLDELITAIHNDIEEAKKKLD 131


>gi|17541882|ref|NP_501922.1| hypothetical protein R10H10.6 [Caenorhabditis elegans]
 gi|3879154|emb|CAA94613.1| C. elegans protein R10H10.6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 135

 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 8/129 (6%)

Query: 184 HLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLSPDILLKEGV-YAIRFRTQ--DQTSYS 239
           +LL Y+F  E  V+ G  + G+ LG PTANM  +    L EG+   + F T   D  SY 
Sbjct: 2   NLLPYQFVGE--VVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKLDGKSYK 59

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NP    N    +E  + D+S  + YG+  +     ++R    F+ +++LK  +
Sbjct: 60  MAMSIGWNPQ-YQNEKKTVELHLIDYSGSDFYGKTLSAVIIGFIREMKSFESLDELKSAI 118

Query: 299 GEDEKKARK 307
             D K AR+
Sbjct: 119 AMDIKVARR 127


>gi|110289212|gb|ABG66125.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 397

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 15/181 (8%)

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-----TKGHVLNAAHLLGYRFTIESDVIH 198
           G+  G H + +  +    ++  S+  +  +L      K  +   +  +     IE   I 
Sbjct: 183 GKAAGMHVIAVPSVPKRTAEFSSADEVINSLLDVKPEKWGLPPFSDWIDDTLPIEPWFIG 242

Query: 199 GEKI------GRTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNP 248
           G  I       + LG PTAN+      D+L +   GVY        +  +  V + G NP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGWNP 302

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                   +    + DF ++ YG+   +    Y+RPE  F  +E L   + ED + + K 
Sbjct: 303 YFDNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARISDKA 362

Query: 309 L 309
           L
Sbjct: 363 L 363


>gi|115482402|ref|NP_001064794.1| Os10g0464400 [Oryza sativa Japonica Group]
 gi|22758323|gb|AAN05527.1| putative glutamine synthetase [Oryza sativa Japonica Group]
 gi|31432562|gb|AAP54177.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
           protein, expressed [Oryza sativa Japonica Group]
 gi|33242903|gb|AAQ01155.1| GS1-like protein [Oryza sativa]
 gi|113639403|dbj|BAF26708.1| Os10g0464400 [Oryza sativa Japonica Group]
 gi|125575069|gb|EAZ16353.1| hypothetical protein OsJ_31815 [Oryza sativa Japonica Group]
 gi|215692951|dbj|BAG88371.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694884|dbj|BAG90075.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 397

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 15/181 (8%)

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-----TKGHVLNAAHLLGYRFTIESDVIH 198
           G+  G H + +  +    ++  S+  +  +L      K  +   +  +     IE   I 
Sbjct: 183 GKAAGMHVIAVPSVPKRTAEFSSADEVINSLLDVKPEKWGLPPFSDWIDDTLPIEPWFIG 242

Query: 199 GEKI------GRTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNP 248
           G  I       + LG PTAN+      D+L +   GVY        +  +  V + G NP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGWNP 302

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                   +    + DF ++ YG+   +    Y+RPE  F  +E L   + ED + + K 
Sbjct: 303 YFDNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARISDKA 362

Query: 309 L 309
           L
Sbjct: 363 L 363


>gi|24644927|ref|NP_649749.2| CG2846 [Drosophila melanogaster]
 gi|41017592|sp|O76206|RIFK_DROME RecName: Full=Putative riboflavin kinase; AltName:
           Full=ATP:riboflavin 5'-phosphotransferase; AltName:
           Full=Flavokinase
 gi|3213202|gb|AAC39087.1| similar to C. elegans R10H10.6 and S. cerevisiae YD8419.03c
           [Drosophila melanogaster]
 gi|7298960|gb|AAF54164.1| CG2846 [Drosophila melanogaster]
 gi|17945940|gb|AAL49015.1| RE45482p [Drosophila melanogaster]
 gi|211938651|gb|ACJ13222.1| FI08805p [Drosophila melanogaster]
 gi|220949082|gb|ACL87084.1| CG2846-PA [synthetic construct]
 gi|220958164|gb|ACL91625.1| CG2846-PA [synthetic construct]
          Length = 153

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 22  KELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPFYNNKEKSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   +  D ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFLDEA 134


>gi|296189805|ref|XP_002742926.1| PREDICTED: riboflavin kinase-like [Callithrix jacchus]
          Length = 162

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 196 VIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           V+HG   G + LG PTAN        L  DI    G+Y           +  V + G NP
Sbjct: 19  VVHGFGRGSKQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNP 76

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                   +    +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K 
Sbjct: 77  YYKNTKKSVETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKQ 136

Query: 309 LE 310
           L+
Sbjct: 137 LD 138


>gi|194743512|ref|XP_001954244.1| GF16845 [Drosophila ananassae]
 gi|190627281|gb|EDV42805.1| GF16845 [Drosophila ananassae]
          Length = 154

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 6/125 (4%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 23  KELGIPTANFPLEVVKALPESLPTGAYYGWANVNNGEVHKMVLSIGWNPFYNNKEKSVET 82

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
             + DF+ ++YG    +    YLRPE  F+ +++L   +  D  KA+ +L+   P + + 
Sbjct: 83  HMLHDFNCDLYGNTLKICIVGYLRPERSFESLQELIDAIQGDITKAKVLLDE--PENAKL 140

Query: 320 RIICF 324
           +  CF
Sbjct: 141 KEACF 145


>gi|195569071|ref|XP_002102535.1| GD19451 [Drosophila simulans]
 gi|194198462|gb|EDX12038.1| GD19451 [Drosophila simulans]
          Length = 153

 Score = 41.6 bits (96), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 22  KELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSVGWNPFYNNKEKSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   +  D ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFLDEA 134


>gi|242018566|ref|XP_002429745.1| Riboflavin kinase, putative [Pediculus humanus corporis]
 gi|212514757|gb|EEB17007.1| Riboflavin kinase, putative [Pediculus humanus corporis]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN+      +L P+  L  GVY    + ++   Y  V + G NP    N    
Sbjct: 23  KELGVPTANLPSQTVNKLPPE--LDTGVYFGWAKVENSPVYKMVMSIGWNP-FYKNKEKS 79

Query: 258 LESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E  I   F  + YG   +V+   ++RPE+ F ++E L   +  D + A K L+
Sbjct: 80  MEIHILHLFENDFYGCMLSVAIVGFIRPEMDFDNVESLIETIRNDIEIAEKELD 133


>gi|18845101|gb|AAL79554.1|AF482734_1 riboflavin kinase [synthetic construct]
 gi|7023634|dbj|BAA92033.1| unnamed protein product [Homo sapiens]
          Length = 162

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+  +V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILSVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 138


>gi|328948919|ref|YP_004366256.1| tRNA pseudouridine synthase B [Treponema succinifaciens DSM 2489]
 gi|328449243|gb|AEB14959.1| tRNA pseudouridine synthase B [Treponema succinifaciens DSM 2489]
          Length = 620

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 8/176 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           KG  + IG+F+ IH GH  +++ A+    N    +++F+   +   + +  IFTL     
Sbjct: 377 KGCALTIGSFEAIHAGHVALIKTAVS-QKNFVSGIITFSSQIKN--EGTGLIFTLEQ--- 430

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +  + +G    +   FT + +      FI+  L+    +K ++ G+ F+ G     + 
Sbjct: 431 RLEFFKDLGLDFAVVIDFTQDFSKIEGADFIE-TLISVCGMKFLVEGSDFKCGYKGLLNM 489

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             L+K  +K  F     D +     +I SSS ++  +  G+ + A  +L   F ++
Sbjct: 490 EELEKISQKKNFELCRQDYVFFEDEKI-SSSRVKKEILAGNFICAQKMLLRPFALD 544


>gi|125532268|gb|EAY78833.1| hypothetical protein OsI_33938 [Oryza sativa Indica Group]
          Length = 348

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      D+L +   GVY        +  +  V + G NP        +  
Sbjct: 205 KVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGWNPYFDNTEKTIEP 264

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + DF ++ YG+   +    Y+RPE  F  +E L   + ED + + K L
Sbjct: 265 WLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARISDKAL 314


>gi|322787655|gb|EFZ13679.1| hypothetical protein SINV_10326 [Solenopsis invicta]
          Length = 151

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 9/113 (7%)

Query: 204 RTLGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           R LG PTAN+       L  D  L  G+Y   + +   T Y  VA+ G NP        +
Sbjct: 23  RALGIPTANLSEPVVSALPKD--LNTGIY-YGWASLHGTVYKMVASIGWNPYYKNEKKSM 79

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F  + YG+   V    Y+RPE  F  +++L   +  D   A + LE
Sbjct: 80  EVHLLHKFQDDFYGEELKVIISGYIRPERDFSSLDELVTEIKNDIAIAERQLE 132


>gi|320162605|gb|EFW39504.1| riboflavin kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 190

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 204 RTLGFPTANMQLSPDILLKEGV-----YAIRFRTQDQTS------------------YSG 240
           + LG PTAN+       + EG+     Y     TQ + S                  Y  
Sbjct: 34  KELGIPTANLPEDIANSMSEGISTGIYYGWASVTQSKASGSGSSSTPAPAAPAAAPVYPM 93

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V + G NP             I DF+Q+ YG    V    Y+RPE+ F  ++ L   +  
Sbjct: 94  VMSVGWNPFYKNEKRSAEVHIIHDFAQDFYGDELAVVVTGYIRPELSFTTLDALIAAIHA 153

Query: 301 DEKKARKILE 310
           D +KA+K LE
Sbjct: 154 DIEKAKKDLE 163


>gi|269973877|ref|NP_060809.3| riboflavin kinase [Homo sapiens]
 gi|209572667|sp|Q969G6|RIFK_HUMAN RecName: Full=Riboflavin kinase; AltName: Full=ATP:riboflavin
           5'-phosphotransferase; AltName: Full=Flavokinase
 gi|57209232|emb|CAI40676.1| riboflavin kinase [Homo sapiens]
          Length = 155

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 21  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 79  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 131


>gi|16768454|gb|AAL28446.1| GM04958p [Drosophila melanogaster]
          Length = 153

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 22  KEMGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPFYNNKEKSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   +  D ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFLDEA 134


>gi|115481456|ref|NP_001064321.1| Os10g0209300 [Oryza sativa Japonica Group]
 gi|19881629|gb|AAM01030.1|AC091735_3 Putative Riboflavin biosynthesis protein ribF [Oryza sativa
           Japonica Group]
 gi|110288837|gb|ABG65995.1| Riboflavin kinase/FAD synthetase family protein [Oryza sativa
           Japonica Group]
 gi|113638930|dbj|BAF26235.1| Os10g0209300 [Oryza sativa Japonica Group]
          Length = 329

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 5/125 (4%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLS--PDILLKEG--VYAIRFRTQDQTSYSGVANF 244
           + I   VI G   G + LG PTAN+      D+L +    VY        +  Y  V + 
Sbjct: 171 WFIGGSVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSRVYFGWAGLSTRGIYKMVMSI 230

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NP        +    + DF ++ YG+   +    Y+RPE  F  +E L   + ED + 
Sbjct: 231 GWNPYFDNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARI 290

Query: 305 ARKIL 309
           A K L
Sbjct: 291 AEKAL 295


>gi|332236580|ref|XP_003267478.1| PREDICTED: riboflavin kinase-like [Nomascus leucogenys]
          Length = 162

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKQLE 138


>gi|189055105|dbj|BAG38089.1| unnamed protein product [Homo sapiens]
          Length = 162

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 138


>gi|33303811|gb|AAQ02419.1| hypothetical protein FLJ11149 [synthetic construct]
          Length = 163

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 138


>gi|326499237|dbj|BAK06109.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525355|dbj|BAK07947.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530464|dbj|BAJ97658.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530718|dbj|BAK01157.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLS--PDILLK--EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+      DIL +   GVY        +  Y  V + G NP        +  
Sbjct: 254 KVLGIPTANLAAENFSDILSEHTSGVYFGWAGLSKRGIYKMVMSIGWNPYFDNTEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +  F ++ YG+   +    Y+RPE  F  +E L   + ED + A   L+
Sbjct: 314 WLLHGFDEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDGRIAENALD 364


>gi|13937920|gb|AAH07069.1| Riboflavin kinase [Homo sapiens]
 gi|119582982|gb|EAW62578.1| riboflavin kinase, isoform CRA_a [Homo sapiens]
 gi|119582983|gb|EAW62579.1| riboflavin kinase, isoform CRA_a [Homo sapiens]
          Length = 162

 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 138


>gi|297684611|ref|XP_002819922.1| PREDICTED: riboflavin kinase-like [Pongo abelii]
          Length = 162

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 28  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 85

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 86  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 138


>gi|332372790|gb|AEE61537.1| unknown [Dendroctonus ponderosae]
          Length = 151

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 204 RTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + LG PTAN         PD L   GVY    +      +  V + G NP    +   + 
Sbjct: 23  KDLGIPTANFPQDVVNNLPDGL-DTGVYYGFGQVDGGQVHGMVMSIGWNPFYKNSKKSME 81

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +  F  + YG+   V    YLRPE  F  ++ L   +  D K+AR  LE
Sbjct: 82  THLMHKFESDFYGKELRVVILGYLRPEQNFPGLDALIAAIDNDIKQARTRLE 133


>gi|40889446|pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary
           Product Complex
          Length = 149

 Score = 40.4 bits (93), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 22  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 79

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 80  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 132


>gi|195344336|ref|XP_002038744.1| GM10446 [Drosophila sechellia]
 gi|194133765|gb|EDW55281.1| GM10446 [Drosophila sechellia]
          Length = 153

 Score = 40.4 bits (93), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 22  KELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSVGWNPFYNNKERSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   +  D ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKASLDEA 134


>gi|308799713|ref|XP_003074637.1| putative glutamine synthetase (ISS) [Ostreococcus tauri]
 gi|116000808|emb|CAL50488.1| putative glutamine synthetase (ISS) [Ostreococcus tauri]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 204 RTLGFPTANMQLSP-----DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + LG PTAN+ + P     D L   G+Y + F +    ++  V + G NP    +   + 
Sbjct: 258 KMLGIPTANLDVVPLKSQVDSL-APGIY-LGFASIRGETHEMVMSIGWNPYFDNSKKTIE 315

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              + +F  + Y +   V    Y+RPE  F  +E L   +  D + AR +L+++
Sbjct: 316 PWLLHEFPDDFYDEELAVVVSGYIRPEADFTTLEALVERIHRDAEVARTMLKNT 369


>gi|195498636|ref|XP_002096608.1| GE25761 [Drosophila yakuba]
 gi|194182709|gb|EDW96320.1| GE25761 [Drosophila yakuba]
          Length = 153

 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 204 RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN  L     L E    G Y       +   +  V + G NP        +  
Sbjct: 22  KELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSVGWNPFYNNKEKSVET 81

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             + DF+ ++YGQ   +    YLRPE  F  +E L   +  D ++A+  L+ +
Sbjct: 82  HMLHDFNCDLYGQILKICIVGYLRPERSFDSLEALIAAIRLDIEQAKAFLDEA 134


>gi|159149209|gb|ABW91168.1| riboflavin kinase [Mycobacterium lepromatosis]
          Length = 116

 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 16/116 (13%)

Query: 207 GFPTANMQLSPDILLK---EGVYAIRFRTQDQT----------SYSGVANFGRNPTMVPN 253
           G PTAN  ++P +      +GVYA  F                 Y    + G NPT    
Sbjct: 2   GDPTAN--VAPPMYSATPADGVYAAWFTVLGHGPATGTVVPGECYQAAVSVGTNPTFSGR 59

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               +E+F+ D   ++YGQ   + F   +R + KF     L   M +D  +AR +L
Sbjct: 60  -THTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSAADLVAAMEKDIDRARALL 114


>gi|15829019|ref|NP_326379.1| hypothetical protein MYPU_5480 [Mycoplasma pulmonis UAB CTIP]
 gi|14089963|emb|CAC13721.1| RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF [INCLUDES: RIBOFLAVIN KINASE
           (FLAVOKINASE); FMN ADENYLYLTRANSFERASE (FAD
           PYROPHOSPHORYLASE) (FAD SYNTHETASE)] [Mycoplasma
           pulmonis]
          Length = 279

 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           IG F+  H+GH  + E+A++ +      V     +P  + ++ +  F      IQ   L 
Sbjct: 20  IGAFESFHIGHKKLFEKALEYSEKDFELVFVIVKNPADLPKNKAKNFLSFNSRIQS--LV 77

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                 L+ + F  E ++     FI+K LVE     ++I G  F+ GK  + +   L+K 
Sbjct: 78  DFNLKKLVVWDFN-EVSSLDGFDFIKK-LVEKTSDFSIIVGEDFKLGKRASVNASDLKKH 135

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                F  V I E+    S+ +++S ++  L  G +     LL   + IE
Sbjct: 136 -----FQKVEIVEIETINSRKIATSLLKEQLEFGEIDFVNLLLIKNYEIE 180


>gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus
           communis]
 gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus
           communis]
          Length = 382

 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN+       +L +   GVY        +  Y  V + G NP        +  
Sbjct: 254 KVLGIPTANLSTEGYSAVLSQHPSGVYFGWAALSTRGVYKMVMSIGWNPYFNNVEKTIEP 313

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + +F ++ YG+   +    Y+RPE  F  +E L   + ED K A   L+
Sbjct: 314 WLLHEFEEDFYGEELRLVIVGYIRPEANFPSLESLVAKIQEDRKVAEIALD 364


>gi|29726587|pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase
 gi|29726597|pdb|1NB9|A Chain A, Crystal Structure Of Riboflavin Kinase
 gi|31615984|pdb|1P4M|A Chain A, Crystal Structure Of Riboflavin Kinase
          Length = 147

 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y           +  V + G NP        +
Sbjct: 20  KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 77

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K LE
Sbjct: 78  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLE 130


>gi|149606991|ref|XP_001516422.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 191

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L PD  +  G+Y       +   +  V + G NP    N    
Sbjct: 21  KQLGIPTANFPEDIVEDLPPD--MSTGIYYGWACVGNGEVHKMVLSVGWNPYYR-NAKKS 77

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           +E+ I  +F ++ YG+  ++    Y+RPE  F+ I+ L   +  D ++A+K L+  YP
Sbjct: 78  METHIMHNFKEDFYGEMLSIIITGYIRPEESFESIDALIAAIRNDIEEAKKRLD--YP 133


>gi|223701632|gb|ACN21121.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701635|gb|ACN21123.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701641|gb|ACN21127.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701644|gb|ACN21129.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701647|gb|ACN21131.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701650|gb|ACN21133.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701653|gb|ACN21135.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701656|gb|ACN21137.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701659|gb|ACN21139.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701662|gb|ACN21141.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701665|gb|ACN21143.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701674|gb|ACN21149.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701677|gb|ACN21151.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701683|gb|ACN21155.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701686|gb|ACN21157.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701689|gb|ACN21159.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701692|gb|ACN21161.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701701|gb|ACN21167.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701704|gb|ACN21169.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701707|gb|ACN21171.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701710|gb|ACN21173.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701713|gb|ACN21175.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701716|gb|ACN21177.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701719|gb|ACN21179.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701722|gb|ACN21181.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701725|gb|ACN21183.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701728|gb|ACN21185.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701731|gb|ACN21187.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701734|gb|ACN21189.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701737|gb|ACN21191.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701740|gb|ACN21193.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701746|gb|ACN21197.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701749|gb|ACN21199.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701752|gb|ACN21201.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701755|gb|ACN21203.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701758|gb|ACN21205.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701761|gb|ACN21207.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701764|gb|ACN21209.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701767|gb|ACN21211.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701770|gb|ACN21213.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701773|gb|ACN21215.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701776|gb|ACN21217.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701785|gb|ACN21223.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701788|gb|ACN21225.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701791|gb|ACN21227.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701794|gb|ACN21229.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701797|gb|ACN21231.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701800|gb|ACN21233.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701803|gb|ACN21235.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701806|gb|ACN21237.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701809|gb|ACN21239.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701812|gb|ACN21241.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701815|gb|ACN21243.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701818|gb|ACN21245.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701824|gb|ACN21249.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701827|gb|ACN21251.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701830|gb|ACN21253.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701833|gb|ACN21255.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701836|gb|ACN21257.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701839|gb|ACN21259.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701842|gb|ACN21261.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701845|gb|ACN21263.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701848|gb|ACN21265.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701863|gb|ACN21275.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701866|gb|ACN21277.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701869|gb|ACN21279.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701872|gb|ACN21281.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701875|gb|ACN21283.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701878|gb|ACN21285.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701881|gb|ACN21287.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701884|gb|ACN21289.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701890|gb|ACN21293.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701893|gb|ACN21295.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701896|gb|ACN21297.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701899|gb|ACN21299.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701902|gb|ACN21301.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701905|gb|ACN21303.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701908|gb|ACN21305.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701911|gb|ACN21307.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701914|gb|ACN21309.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701917|gb|ACN21311.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701923|gb|ACN21315.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701926|gb|ACN21317.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701932|gb|ACN21321.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701935|gb|ACN21323.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701938|gb|ACN21325.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701941|gb|ACN21327.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701944|gb|ACN21329.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701947|gb|ACN21331.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701971|gb|ACN21347.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701974|gb|ACN21349.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701977|gb|ACN21351.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701980|gb|ACN21353.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701983|gb|ACN21355.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701986|gb|ACN21357.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701989|gb|ACN21359.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701992|gb|ACN21361.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701995|gb|ACN21363.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701998|gb|ACN21365.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702001|gb|ACN21367.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702004|gb|ACN21369.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702007|gb|ACN21371.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 40.4 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  +++QA +IA    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDP 59


>gi|307205600|gb|EFN83892.1| Riboflavin kinase [Harpegnathos saltator]
          Length = 147

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 204 RTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + LG PTAN   S     PD L   G+Y      Q Q  Y  VA+ G NP        + 
Sbjct: 23  KALGIPTANFSESVVNTLPDDL-NTGIYYGWASLQKQI-YKMVASIGWNPYYKNEKKSVE 80

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +  F  ++YG+   V    Y+RPE  F   E+L
Sbjct: 81  VHLLHKFQDDLYGEELKVIIAGYIRPEKDFSSEEEL 116


>gi|293346161|ref|XP_001079189.2| PREDICTED: riboflavin kinase-like [Rattus norvegicus]
 gi|293357943|ref|XP_230344.5| PREDICTED: riboflavin kinase-like [Rattus norvegicus]
          Length = 155

 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           F     V+ G   G + LG PTAN        L  D+    G+Y           +  V 
Sbjct: 6   FFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGEVHKMVV 63

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NP        +    I  F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 64  SIGWNPYYKNVKKSMQTHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 123

Query: 303 KKARKILESSYPLSERD 319
           ++A+K L+    L  +D
Sbjct: 124 EEAKKQLDLPEHLKLKD 140


>gi|223701668|gb|ACN21145.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701671|gb|ACN21147.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701695|gb|ACN21163.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701698|gb|ACN21165.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701743|gb|ACN21195.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701779|gb|ACN21219.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701782|gb|ACN21221.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701821|gb|ACN21247.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701851|gb|ACN21267.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701854|gb|ACN21269.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701857|gb|ACN21271.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701887|gb|ACN21291.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701920|gb|ACN21313.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701950|gb|ACN21333.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701953|gb|ACN21335.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701956|gb|ACN21337.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701959|gb|ACN21339.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701962|gb|ACN21341.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701965|gb|ACN21343.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701968|gb|ACN21345.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 40.0 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  +++QA +IA    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDP 59


>gi|255084317|ref|XP_002508733.1| predicted protein [Micromonas sp. RCC299]
 gi|226524010|gb|ACO69991.1| predicted protein [Micromonas sp. RCC299]
          Length = 151

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)

Query: 204 RTLGFPTANMQLSPDIL----LKEGVY--AIRFRTQDQTSYSG-----VANFGRNPTMVP 252
           + LG PTAN+ +SP  L    L  G+Y        +D+    G     V + G NP    
Sbjct: 14  KMLGIPTANLDVSPLKLQADALAPGIYFGWAAVAKEDRRDVGGGVYRMVMSIGWNP-FFD 72

Query: 253 NGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           N    +E ++  +F  + Y Q   +    Y+RPE  F  +E L   +  D + A+  L
Sbjct: 73  NAKKTIEPWLLHEFGGDFYDQELRLHVLGYIRPEANFTTLEDLVKRIHRDAEVAKTCL 130


>gi|14149726|ref|NP_062310.1| riboflavin kinase [Mus musculus]
 gi|37537952|sp|Q8CFV9|RIFK_MOUSE RecName: Full=Riboflavin kinase; AltName: Full=ATP:riboflavin
           5'-phosphotransferase; AltName: Full=Flavokinase;
           AltName: Full=KOI-4
 gi|12833060|dbj|BAB22372.1| unnamed protein product [Mus musculus]
 gi|12842488|dbj|BAB25622.1| unnamed protein product [Mus musculus]
 gi|12846170|dbj|BAB27057.1| unnamed protein product [Mus musculus]
 gi|37572284|gb|AAH51021.1| Riboflavin kinase [Mus musculus]
 gi|127796553|gb|AAH33521.2| Riboflavin kinase [Mus musculus]
 gi|148709608|gb|EDL41554.1| riboflavin kinase, isoform CRA_b [Mus musculus]
          Length = 155

 Score = 39.7 bits (91), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           F     V+ G   G + LG PTAN        L  D+    G+Y           +  V 
Sbjct: 6   FFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGDVHKMVV 63

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NP        +    I  F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 64  SIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 123

Query: 303 KKARKILESSYPLSERD 319
           ++A+K L+    L  +D
Sbjct: 124 EEAKKQLDLPEHLKLKD 140


>gi|62078945|ref|NP_001014128.1| riboflavin kinase [Rattus norvegicus]
 gi|62667123|ref|XP_577001.1| PREDICTED: similar to riboflavin kinase isoform 2 [Rattus
           norvegicus]
 gi|50927358|gb|AAH79125.1| Riboflavin kinase [Rattus norvegicus]
 gi|149062554|gb|EDM12977.1| rCG48018 [Rattus norvegicus]
          Length = 155

 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           F     V+ G   G + LG PTAN        L  D+    G+Y           +  V 
Sbjct: 6   FFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGEVHKMVV 63

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NP        +    I  F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 64  SIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 123

Query: 303 KKARKILESSYPLSERD 319
           ++A+K L+    L  +D
Sbjct: 124 EEAKKQLDLPEHLKLKD 140


>gi|223701860|gb|ACN21273.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 39.7 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  +++QA ++A    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQLAEQKGLQTAVLTFDP 59


>gi|302830912|ref|XP_002947022.1| hypothetical protein VOLCADRAFT_103251 [Volvox carteri f.
           nagariensis]
 gi|300268066|gb|EFJ52248.1| hypothetical protein VOLCADRAFT_103251 [Volvox carteri f.
           nagariensis]
          Length = 576

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 203 GRTLGFPTANMQ----LSPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLL 257
           G  LG PTAN+      +       G+YA   R  ++   +  V + G NP    N    
Sbjct: 249 GADLGIPTANVDPEAVAAALAEAVTGIYAGWARVGNRPEVHKTVLSIGWNP-FFGNKEKT 307

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           LE +I   F +  YG+  ++    Y+RPE  F  +E L   +  D + +R  L+
Sbjct: 308 LEPWILHSFDEPFYGETLSLVICGYVRPEANFSSLEALIARIHADAEVSRAALD 361


>gi|56758780|gb|AAW27530.1| SJCHGC02943 protein [Schistosoma japonicum]
          Length = 153

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 187 GYRFTIESDVIHGEKIG-RTLGFPTANMQ-----LSPDILLKEGVYAIRFRTQDQTSYSG 240
           G  F     V+HG   G + LG PTAN++       PD  +K G+Y    +  +   Y  
Sbjct: 8   GALFYAAGKVVHGFGRGSKQLGIPTANLEEFIVDQIPD-SVKNGIYFGWAKLNNTPVYKM 66

Query: 241 VANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           V + G NP    N    +E  I   F +  YG    +    + RPE+ F  I  L   + 
Sbjct: 67  VMSIGWNPYF-KNAKRSMEVHILHHFEENFYGDTIKLIAVKFSRPELDFPSITDLIKQIH 125

Query: 300 EDEKKARKILESSYPL 315
            D  +A   L  S  L
Sbjct: 126 IDISEANSFLNKSEAL 141


>gi|301778225|ref|XP_002924531.1| PREDICTED: hypothetical protein LOC100482275 [Ailuropoda
           melanoleuca]
          Length = 311

 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  D+    G+Y       +   +  V + G NP        +
Sbjct: 177 KQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSM 234

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 235 ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQADIEEAKKRLD 287


>gi|268553171|ref|XP_002634570.1| Hypothetical protein CBG08376 [Caenorhabditis briggsae]
 gi|187032738|emb|CAP28212.1| hypothetical protein CBG_08376 [Caenorhabditis briggsae AF16]
          Length = 135

 Score = 38.9 bits (89), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 16/133 (12%)

Query: 184 HLLGYRFTIESDVIHG-EKIGRTLGFPTANMQLS-----PDILLKEGVYAIRFRTQ--DQ 235
            +L YRF  E +V+ G  + G+ LG PTANM  S     P+  L+ GVY   + T   + 
Sbjct: 2   QILPYRF--EGEVVRGFGRGGKELGCPTANMDDSVIQNLPE-SLQVGVY---YGTAILEG 55

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             YS   + G NP    N    +E  + D++  + YG+R +     ++R    F  + +L
Sbjct: 56  EKYSMAMSIGWNPQY-QNEKKTVEIHLIDYAGGDFYGKRLSAVIIGFIREMKSFGSLGEL 114

Query: 295 KIYMGEDEKKARK 307
           K  + +D + AR+
Sbjct: 115 KSAIAKDIEVARR 127


>gi|258614822|ref|ZP_05712592.1| riboflavin biosynthesis protein RibF [Enterococcus faecium DO]
          Length = 79

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
          V+ +G FDG+H+GH  +++  ++IA      + +++FN HP  + +   P
Sbjct: 21 VLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDP 70


>gi|223701638|gb|ACN21125.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701680|gb|ACN21153.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701929|gb|ACN21319.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  ++++A +IA    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDP 59


>gi|322818920|gb|EFZ26195.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGR 246
           F +   VIHG   G T LGFPTAN++L  ++  +   Y   + F      +  G  N G 
Sbjct: 13  FLLSGKVIHGYGRGGTQLGFPTANLELDDNVRAQLNPYKNLVLFGWGSVIAIPGKENCGE 72

Query: 247 NP----TMVPNGP------LLLES-FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P      +   P      L  E  FI +F+++ YG    +     LR    F  +E L 
Sbjct: 73  GPYPFSMSIGYNPHFHGVDLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALV 132

Query: 296 IYMGEDEKKARKILE 310
             + +D +K  + L+
Sbjct: 133 YAIKDDVRKTEEALQ 147


>gi|213512526|ref|NP_001133984.1| Riboflavin kinase [Salmo salar]
 gi|209156058|gb|ACI34261.1| Riboflavin kinase [Salmo salar]
          Length = 162

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 204 RTLGFPTANMQLSPDILLKE-------GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + LG PTAN    PD +++        G+Y           +  V + G NP        
Sbjct: 21  KELGIPTANF---PDSVVEHLPGDISTGIYYGWACVGSGDVHKMVMSIGWNPYYKNTKKS 77

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    I  F ++ YGQ  +V    Y+RPE  +  ++ L   +  D ++A++ L+
Sbjct: 78  METHVIHTFKEDFYGQILSVVMVGYIRPERSYDSLDALIAAINHDIEEAKRNLD 131


>gi|213581352|ref|ZP_03363178.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          E98-0664]
          Length = 94

 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
          G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P
Sbjct: 16 GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQP 58


>gi|294931943|ref|XP_002780064.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239889908|gb|EER11859.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 183

 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 17/115 (14%)

Query: 204 RTLGFPTANMQL-SPDIL-----LKEGVY----AIRFRTQ------DQTSYSGVANFGRN 247
           + LG+PTAN+   SP +       + GVY     +R+  +      D+  +    + G N
Sbjct: 34  KLLGYPTANITSDSPAVAQFLEAAETGVYLGFAQVRYAKECSASKGDREVHPTALSVGVN 93

Query: 248 PTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           P+       L+E++I   F+ + YG    +      RPE+ F+ IE+LK  M  D
Sbjct: 94  PSFNDVKEKLVEAYIMHQFTSDFYGTELRLLVLGRFRPELPFESIEQLKAEMKID 148


>gi|328782055|ref|XP_003250076.1| PREDICTED: riboflavin kinase-like [Apis mellifera]
          Length = 147

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 204 RTLGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN++      L  D     G+Y   + + D   Y  VA+ G NP        +
Sbjct: 23  KALGIPTANLEDNVVENLPND--FNTGIY-YGWASIDGQIYKMVASIGWNPFYKNKKKTV 79

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               I  F  + YG++    F  Y+RPE  F   E+L
Sbjct: 80  ELHLIHTFENDFYGKQIKAIFVGYIRPEKNFTSEEEL 116


>gi|74354693|gb|AAI02763.1| RFK protein [Bos taurus]
          Length = 234

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y       +   +  V + G NP        +
Sbjct: 100 KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSM 157

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 158 ETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAIQGDIEEAKKRLD 210


>gi|156555901|ref|XP_001601223.1| PREDICTED: similar to aldose-1-epimerase [Nasonia vitripennis]
          Length = 378

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTL-ETANYSAEQFIQKVL----VEWLEVKTVIT 123
           IF L  P+I   ++ ++       Y F L E  + S E F+ KV+       LEV +   
Sbjct: 249 IFDLRKPTILGDVINQV-LGGGYDYNFCLPECTDLSKENFVAKVIHPGSGRTLEVFSNQP 307

Query: 124 GTKFRF--GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           G +F    G   +G  GI  K+G+KY  H  F  E +N    +   +   + L   HV  
Sbjct: 308 GVQFYTANGFPESGTEGIPGKQGKKYFKHGAFCLETQNYPDAVNHKNFPDSILRPHHVY- 366

Query: 182 AAHLLGYRFTIES 194
             H++ Y+F ++S
Sbjct: 367 -YHVVTYKFGVQS 378


>gi|110736161|dbj|BAF00052.1| hypothetical protein [Arabidopsis thaliana]
          Length = 234

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 18/99 (18%)

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           +QF++K+  E L V  V+ G  +RFG   +GD   L +  + +G     I+ +  +K+Q+
Sbjct: 50  QQFVEKLSRE-LRVCGVVAGENYRFGYRASGDASELVRLCKDFGISAYIINSVM-DKNQV 107

Query: 165 ----------------VSSSNIRTALTKGHVLNAAHLLG 187
                           VSS+ +R AL  G V     LLG
Sbjct: 108 SVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTELLG 146


>gi|47226414|emb|CAG08430.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 145

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 204 RTLGFPTANMQLSPDILLKE-------GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           + LG PTAN    PD +++        G+Y       +   +  V + G NP        
Sbjct: 21  KELGIPTANF---PDSVVENLPADIGTGIYYGWASLGNGDVHKMVMSIGWNPYYKNTKKS 77

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    I  F ++ YG+  +V    Y+RPE  F  ++ L   + +D ++A   L+
Sbjct: 78  METHVIHTFKEDFYGELLSVVMVGYIRPERSFDSLDALVTAINDDIEEANTKLD 131


>gi|323450029|gb|EGB05913.1| hypothetical protein AURANDRAFT_16279 [Aureococcus anophagefferens]
          Length = 133

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 11/118 (9%)

Query: 203 GRTLGFPTANM--QLSPDIL--LKEGVYAI--RFRTQDQTS--YSGVANFGRNPTMV-PN 253
           G+ LG PTAN+   L  D L  +  GVY    +    D  +     V N G +PT V   
Sbjct: 16  GKDLGVPTANLPEDLFGDALRTVDAGVYGAWAKLAGDDPAAEPRPAVVNVGYSPTFVDAE 75

Query: 254 GPL-LLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            PL + E+ + D+   + YG+   +      RPE KF D   L   +  D   AR+ L
Sbjct: 76  NPLKIAEAHLLDYEGGDFYGETMALVLVSRQRPEQKFPDFPTLLANIRNDIDVARRAL 133


>gi|195996533|ref|XP_002108135.1| hypothetical protein TRIADDRAFT_52300 [Trichoplax adhaerens]
 gi|190588911|gb|EDV28933.1| hypothetical protein TRIADDRAFT_52300 [Trichoplax adhaerens]
          Length = 155

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L+ D     G+Y       D   +  V + G NP        +
Sbjct: 25  KELGIPTANFSENVMESLAGDT--GNGIYFGLAAVDDSPVHKMVMSIGWNPYYKNTKKTM 82

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I DF  + YG    V    ++RPE  F  +++L   +  D + A+  LE
Sbjct: 83  EVHVIHDFENDFYGSELRVIVLGHIRPEKDFSSLDQLIAEIHNDIRIAKSRLE 135


>gi|71662053|ref|XP_818039.1| riboflavin kinase [Trypanosoma cruzi strain CL Brener]
 gi|70883266|gb|EAN96188.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGR 246
           F +   VIHG   G T LGFPTAN++L  ++  +   Y   + F      +  G  N G 
Sbjct: 13  FLLSGKVIHGYGRGGTQLGFPTANLELDDNVRAQLNPYKNLVLFGWGSVIAIPGKENCGE 72

Query: 247 NP----TMVPNGP----LLLES---FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P      +   P    L L +   FI +F+++ YG    +     LR    F  +E L 
Sbjct: 73  GPYPFSMSIGYNPHFHGLDLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALV 132

Query: 296 IYMGEDEKKARKILE 310
             + +D +K  + L+
Sbjct: 133 DAIKDDVRKTEEALQ 147


>gi|289810135|ref|ZP_06540764.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          AG3]
          Length = 81

 Score = 37.7 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
          G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P
Sbjct: 16 GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQP 58


>gi|213027445|ref|ZP_03341892.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          404ty]
          Length = 77

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
          G V+ IGNFDG+H GH  +L+  Q        P+ V+ F P P
Sbjct: 16 GCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQP 58


>gi|194224744|ref|XP_001494854.2| PREDICTED: similar to riboflavin kinase [Equus caballus]
          Length = 260

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 9/128 (7%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           +    +V+ G   G + LG PTAN        L  D  L  G+Y           +  V 
Sbjct: 111 YFCRGEVVRGFGRGSKQLGIPTANFPEQVVDNLPAD--LSTGIYYGWASVGSGDVHKMVV 168

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NP        +    +  F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 169 SIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPERNFDSLESLISAIHGDI 228

Query: 303 KKARKILE 310
           ++A+K L+
Sbjct: 229 EEAKKRLD 236


>gi|311245929|ref|XP_003122015.1| PREDICTED: riboflavin kinase-like [Sus scrofa]
          Length = 241

 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  D+    G+Y           +  V + G NP        +
Sbjct: 107 KQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 164

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 165 ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKQLD 217


>gi|291002011|ref|XP_002683572.1| predicted protein [Naegleria gruberi]
 gi|284097201|gb|EFC50828.1| predicted protein [Naegleria gruberi]
          Length = 161

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 192 IESDVIHG-EKIGRTLGFPTANMQLSPDILLKE---GVYAIRFRTQDQTSYSGVANFGRN 247
           I  +VI G  + G+ LG PTAN+ +     L +   GVY    + +  T  + V + G N
Sbjct: 29  ITGEVIKGFGRGGKLLGIPTANLPIENCKELSQIEMGVYIGYAKIRGITCKT-VISIGNN 87

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           P        +    + DF+ + YG+  T+S   ++R   K+ +++ L
Sbjct: 88  PHFQNEQKTIEPHLLHDFNSDFYGENLTISICGFIRYMEKYDNLDDL 134


>gi|73946766|ref|XP_541275.2| PREDICTED: similar to riboflavin kinase [Canis familiaris]
          Length = 589

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  D+    G+Y           +  V + G NP        +
Sbjct: 455 KQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSM 512

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 513 ETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLD 565


>gi|293363089|ref|XP_002730309.1| PREDICTED: similar to riboflavin kinase isoform 1 [Rattus
           norvegicus]
          Length = 136

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 9/125 (7%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           F     V+ G   G + LG PTAN        L  D+    G+Y           +  V 
Sbjct: 6   FFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADV--STGIYYGWASVGSGEVHKMVV 63

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G NP        +    I  F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 64  SIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 123

Query: 303 KKARK 307
           ++A++
Sbjct: 124 EEAKR 128


>gi|297467363|ref|XP_592590.5| PREDICTED: riboflavin kinase [Bos taurus]
          Length = 339

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y       +   +  V + G NP        +
Sbjct: 205 KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSM 262

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 263 ETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAIQGDIEEAKKRLD 315


>gi|126334727|ref|XP_001372394.1| PREDICTED: similar to RFK protein [Monodelphis domestica]
          Length = 250

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)

Query: 204 RTLGFPTANM--QLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + LG PTAN   Q+  ++   L  G+Y       + + +  V + G NP        +  
Sbjct: 116 KQLGIPTANFPEQVVDNLPNDLSPGIYYGWASVGNGSVHKMVLSIGWNPYYRNLKKSVET 175

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             I  F ++ YG+  ++    Y+RPE  F  I+ L   + +D ++A+K L+
Sbjct: 176 HIIHTFKEDFYGEILSIVITGYIRPEKNFSSIDALISAIQDDIEEAKKQLD 226


>gi|193671562|ref|XP_001950511.1| PREDICTED: putative riboflavin kinase-like [Acyrthosiphon pisum]
          Length = 150

 Score = 37.0 bits (84), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN   S D++      +  GVY    +      Y  V + G NP    N    
Sbjct: 29  KDLGIPTAN--FSRDVIKGLPENISTGVYFGWAQVDKSPVYMMVMSIGWNP-FYQNIEKS 85

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +E  I   F ++ YG    V    ++RPE+ F  +++L   +  D + A++ L+ +
Sbjct: 86  MEIHILKQFDEDFYGSNLKVKVVGFIRPELNFNSVDELVSTIHSDIEYAKQKLDEN 141


>gi|91086741|ref|XP_971589.1| PREDICTED: similar to riboflavin kinase [Tribolium castaneum]
          Length = 148

 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN     D++       + GVY    + ++   Y  V + G NP    N    
Sbjct: 23  KELGIPTAN--FDEDVVGNLPEETEPGVYFGFAQIENGPIYKMVMSVGWNP-FYKNTKKS 79

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           +E++I   F ++ YG+   V    YLR E  FK +E L   +  D      +LE+   L 
Sbjct: 80  METYIIHKFDEDFYGKILKVVMLGYLRSEKDFKSVEDLIQAINND------VLEAQTKLD 133

Query: 317 ER 318
           E 
Sbjct: 134 EE 135


>gi|289670399|ref|ZP_06491474.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 49

 Score = 37.0 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 3  VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA 45
          +F ++E     P+   G VV IG FDG+HLGH  +++ A+  A
Sbjct: 4  LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHRTLVQHAVARA 43


>gi|71896241|ref|NP_001026776.1| riboflavin kinase [Gallus gallus]
 gi|53127244|emb|CAG31021.1| hypothetical protein RCJMB04_1k1 [Gallus gallus]
          Length = 155

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN           DI    G+Y           +  V + G NP        +
Sbjct: 21  KELGVPTANFSEQVVESFPSDI--STGIYYGWACVGSGDVHKMVLSIGWNPFYKNTKKSV 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I  F ++ YG+  +++   Y+RPE  F  ++ L   + ED ++A++ L+
Sbjct: 79  ETHIIHTFKEDFYGEILSIAIVGYIRPEKNFDSLDALIAAIQEDIEEAKRQLD 131


>gi|71656956|ref|XP_817017.1| riboflavin kinase [Trypanosoma cruzi strain CL Brener]
 gi|70882183|gb|EAN95166.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYA--IRFRTQDQTSYSGVANFGR 246
           F +   VIHG   G T LGFPTAN++L  ++  +   Y   + F      +  G  N G 
Sbjct: 13  FLLSGTVIHGYGRGGTQLGFPTANLELDDNVRAQLKPYKNLVLFGWGSVIAIPGKENCGE 72

Query: 247 NP----TMVPNGP------LLLES-FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            P      +   P      L  E  FI +F+++ YG    +     LR    F  +E L 
Sbjct: 73  GPYPFSMSIGYNPHFHGVDLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALV 132

Query: 296 IYMGEDEKKARKILE 310
             + +D +K  + L+
Sbjct: 133 DAIKDDVRKTEEALQ 147


>gi|297477898|ref|XP_002689713.1| PREDICTED: riboflavin kinase [Bos taurus]
 gi|296484743|gb|DAA26858.1| riboflavin kinase [Bos taurus]
          Length = 288

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANM------QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN        L  DI    G+Y       +   +  V + G NP        +
Sbjct: 154 KQLGIPTANFPEQVVDNLPADI--STGIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSM 211

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               +  F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+
Sbjct: 212 ETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAIQGDIEEAKKRLD 264


>gi|261338726|ref|ZP_05966610.1| alpha glucosidase [Bifidobacterium gallicum DSM 20093]
 gi|270276210|gb|EFA22064.1| alpha glucosidase [Bifidobacterium gallicum DSM 20093]
          Length = 583

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 217 PDILLKEGVYAIRFRTQDQTS--YSGVANFGRNPTMVPNGPLLLESFIFD 264
           P +   E V A      D+T   ++ + NFG  P M+PNG LLL+S  FD
Sbjct: 520 PTVEFGEQVIAYSRPMHDETGDRFACIVNFGAEPVMLPNGELLLKSSPFD 569


>gi|325288454|ref|YP_004264635.1| Endoribonuclease L-PSP [Syntrophobotulus glycolicus DSM 8271]
 gi|324963855|gb|ADY54634.1| Endoribonuclease L-PSP [Syntrophobotulus glycolicus DSM 8271]
          Length = 251

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 275 TVSFFDYLRPEIKFKDIEKL-KIYMGEDEKKARKILESSYPLSERDRIIC 323
           T SF  YL+ E K KDIE++ + Y+G+DE+KA ++++     ++ D +IC
Sbjct: 197 TYSFMIYLQDENKIKDIEEVFEQYIGKDEEKANQLMKVEKMSNDCDVLIC 246


>gi|327263542|ref|XP_003216578.1| PREDICTED: riboflavin kinase-like [Anolis carolinensis]
          Length = 156

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN   S +++      +  G+Y       +   +  V + G NP        +
Sbjct: 21  KELGIPTAN--FSEEVVDSFPADISTGIYYGWACVGNGDVHKMVLSIGWNPYYKNVKKSV 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I  F ++ YG+  ++    Y+RPE  F+ ++ L   +  D +++ K LE
Sbjct: 79  ETHIIHTFEEDFYGEILSIIIVGYIRPEKNFESLDALIAAIKSDIEESEKTLE 131


>gi|38606212|gb|AAR25146.1| macrolide-efflux protein [Streptococcus agalactiae]
          Length = 101

 Score = 36.6 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + + G+N T      L LE+ IFDF  +IYG+   + +   +R  +KF  I+ L   
Sbjct: 25  YRAMTSIGKNITF-GGTELRLEANIFDFDGDIYGETIEIFWLKRIREMVKFNGIDDLVKQ 83

Query: 298 MGEDEKKA 305
           + +D++ A
Sbjct: 84  LKKDKEIA 91


>gi|313672419|ref|YP_004050530.1| hypothetical protein Calni_0454 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939175|gb|ADR18367.1| hypothetical protein Calni_0454 [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 112

 Score = 36.2 bits (82), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFID-ELRNNKSQIVSS------SNIRTALTKGH 178
           KF F    AG+  + +K  E    H V ID EL + K   ++        NI+TA++ GH
Sbjct: 22  KFSFRLFIAGNLEMAKKTVEAEELHLVIIDYELPDGKGDELNIYIKENFPNIKTAISSGH 81

Query: 179 VLNAAHLLGYRFTIE-SDVIH 198
                HL+GY +T++ SD+I+
Sbjct: 82  GETLRHLVGYDYTVDKSDLIN 102


>gi|170575447|ref|XP_001893247.1| riboflavin kinase [Brugia malayi]
 gi|158600869|gb|EDP37926.1| riboflavin kinase, putative [Brugia malayi]
          Length = 155

 Score = 36.2 bits (82), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 203 GRTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           GR LG PTANM  +  + L      GV+           Y  V + G NP        + 
Sbjct: 49  GRKLGCPTANMDDNVILCLPPHFPCGVFYGFANVNRGEVYGMVTSIGWNPHFKNERKTIE 108

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              + DF ++ YG         +LRP + F  +  L ++
Sbjct: 109 VHILHDFQEDFYGAEVRAVLVGFLRPMVAFNSLGYLFVF 147


>gi|307182662|gb|EFN69796.1| Riboflavin kinase [Camponotus floridanus]
          Length = 151

 Score = 36.2 bits (82), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSYSGVAN 243
           + I   VI G   G + LG PTAN   S     P+ L   G+Y        Q  Y  V +
Sbjct: 8   YFISGTVIKGFGRGSKALGIPTANFSESVVNDLPEDL-NTGIYYGWASLHGQV-YKMVTS 65

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NP        +    +  F  + YG++  V    Y+RPE  F  +E+L   +  D  
Sbjct: 66  IGWNPYYKNEKKSMEVHLLHKFHDDFYGKQIKVIITGYIRPERDFSSLEELVREIKNDIT 125

Query: 304 KARKILES 311
            A + LE 
Sbjct: 126 IAEQKLED 133


>gi|255027755|ref|ZP_05299741.1| hypothetical protein LmonocytFSL_17861 [Listeria monocytogenes FSL
           J2-003]
          Length = 126

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R  D  +L+   + Y      +  +  N+++I SS+NIR  + +GH   A  LLG+ +
Sbjct: 9   KGRDSDVDLLRDLCKPYDIGVTSVPVIETNQTKI-SSTNIRAFIRRGHFQEAEELLGHPW 67

Query: 191 TIESDVIHGEKIG 203
            I   V +GE  G
Sbjct: 68  YITGIVENGEMTG 80


>gi|312084790|ref|XP_003144418.1| riboflavin kinase [Loa loa]
 gi|307760420|gb|EFO19654.1| riboflavin kinase [Loa loa]
          Length = 122

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/74 (22%), Positives = 32/74 (43%)

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  V + G NP        +    + DF ++ YG         ++RP + F  +++LK  
Sbjct: 35  YGMVTSIGWNPHFKNERKTIEVHILHDFDEDFYGAEVRAVLVGFMRPMVAFNSLDELKTA 94

Query: 298 MGEDEKKARKILES 311
           +  D   A+ +L +
Sbjct: 95  INNDMSTAKGLLSA 108


>gi|224090873|ref|XP_002187523.1| PREDICTED: riboflavin kinase [Taeniopygia guttata]
          Length = 155

 Score = 35.8 bits (81), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 204 RTLGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           + LG PTAN           DI    G+Y       +   +  V + G NP        +
Sbjct: 21  KELGIPTANFSEQVVESFPSDI--PTGIYYGWACVGNGDVHKMVLSIGWNPFYKNIKKSV 78

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               I  F ++ YG+  ++    Y+RPE  F  ++ L + + ED ++A++ L+
Sbjct: 79  ETHIIHTFKEDFYGEILSIVITGYIRPEKNFDSLDALILAIQEDIEEAKRQLD 131


>gi|47459303|ref|YP_016165.1| hypothetical protein MMOB4680 [Mycoplasma mobile 163K]
 gi|47458633|gb|AAT27954.1| FAD synthase (riboflavin kinase/biosynthesis protein) [Mycoplasma
           mobile 163K]
          Length = 289

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 35/179 (19%), Positives = 83/179 (46%), Gaps = 12/179 (6%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQ 78
             +  G FD +H+GH  + ++A+    N+ ++++ +    P+     +  IF+L     +
Sbjct: 19  NTIVFGGFDSMHIGHLELFKKALAENKNAIVSIVQNIENSPKN--TDNKTIFSLRN---R 73

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             IL  +    ++  K   +  N     FI ++  ++ +++ ++ G  ++FGKD   +  
Sbjct: 74  LDILNAIEIQNVLLIKLDEKLINLEPWDFIDEITKKY-KIEKIVVGEDYKFGKDAKWN-- 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              K  ++Y  +T+ +  ++    +I  +  I   +  G V +   LL   F+I+ D++
Sbjct: 131 --AKNLKEYFPNTIIVPLIKIGNYKI-GTKLISEMIKTGEVSDLNSLLIKFFSIDIDLV 186


Searching..................................................done


Results from round 2




>gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040523|gb|ACT57319.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 324

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR
Sbjct: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT
Sbjct: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL
Sbjct: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG
Sbjct: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE
Sbjct: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DEKKARKILESSYPLSERDRIICF
Sbjct: 301 DEKKARKILESSYPLSERDRIICF 324


>gi|153010353|ref|YP_001371567.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562241|gb|ABS15738.1| riboflavin biosynthesis protein RibF [Ochrobactrum anthropi ATCC
           49188]
          Length = 329

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/323 (47%), Positives = 207/323 (64%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +    SLP  L+  VVAIGNFDG+H GH  +LE+A++IA     P  VL+F PHPR+
Sbjct: 6   FQRLSGTDSLPERLQNCVVAIGNFDGVHRGHQAVLERALEIAEKSDLPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +  +PI  L+  + + +IL  MGF A++   FT E ++ SAE F++ +LVE L+   V
Sbjct: 66  FFKPDAPIDRLTAAAKKAEILRLMGFDAVVEQPFTGEFSSRSAEDFVEHILVERLQASCV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    LQK GEK GF    +D   +    +VSS+ IR  L +G V+ 
Sbjct: 126 VTGYDFHFGKGRRGTPEFLQKAGEKAGFTVTLVDAFSDEGDNLVSSTRIRNLLCEGDVVQ 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+     VIHG+K+GRTLGFPTANMQ+     LK G+YA+RFR ++   Y GV
Sbjct: 186 AAGLLGYRYMACGKVIHGKKLGRTLGFPTANMQIDAQAGLKHGIYAVRFRRENGDLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+  +G  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L   M  D
Sbjct: 246 ASFGRRPTVDSDGTPLLETFLFDFSGDLYGEIACVSFFGFLRGEIKFDGLDPLIDQMKRD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           + +AR +L S+ PLSE DR++ F
Sbjct: 306 DAEARALLASAKPLSELDRLLSF 328


>gi|256111898|ref|ZP_05452854.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 3 str. Ether]
 gi|265993346|ref|ZP_06105903.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 3
           str. Ether]
 gi|262764216|gb|EEZ10248.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 3
           str. Ether]
          Length = 329

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 146/323 (45%), Positives = 200/323 (61%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++  V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSESEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDSLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|225686055|ref|YP_002734027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis ATCC 23457]
 gi|256262824|ref|ZP_05465356.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 2 str.
           63/9]
 gi|260564342|ref|ZP_05834827.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 1 str.
           16M]
 gi|225642160|gb|ACO02073.1| riboflavin biosynthesis protein RibF [Brucella melitensis ATCC
           23457]
 gi|260151985|gb|EEW87078.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 1 str.
           16M]
 gi|263092645|gb|EEZ16866.1| riboflavin kinase/FAD synthetase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410379|gb|ADZ67443.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis M28]
 gi|326553672|gb|ADZ88311.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis M5-90]
          Length = 329

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDSLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|254719935|ref|ZP_05181746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           sp. 83/13]
 gi|265984943|ref|ZP_06097678.1| riboflavin biosynthesis protein RibF [Brucella sp. 83/13]
 gi|306838524|ref|ZP_07471362.1| riboflavin biosynthesis protein RibF [Brucella sp. NF 2653]
 gi|264663535|gb|EEZ33796.1| riboflavin biosynthesis protein RibF [Brucella sp. 83/13]
 gi|306406391|gb|EFM62632.1| riboflavin biosynthesis protein RibF [Brucella sp. NF 2653]
          Length = 329

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A+    P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELADRESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLINQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|315122730|ref|YP_004063219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496132|gb|ADR52731.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 324

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 243/324 (75%), Positives = 281/324 (86%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MHVFHNIE NQ LPNHLKGGVV IGNFDGIHLGH+ ILE AIKIAN +P  VL F+PHPR
Sbjct: 1   MHVFHNIETNQPLPNHLKGGVVVIGNFDGIHLGHYSILEHAIKIANGAPTAVLLFSPHPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++QSS+P+FTL+P SIQ KILEKMGFSALIRYKFTLE +NYS+EQFI+KVLVEWLE K 
Sbjct: 61  IVLQSSTPLFTLTPQSIQTKILEKMGFSALIRYKFTLEMSNYSSEQFIRKVLVEWLEAKK 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VITG++FRFGK+R+GD   L+K G KYGF+T+ IDELR+N  QI+SSS IRT LT G+V 
Sbjct: 121 VITGSQFRFGKNRSGDGTFLEKSGRKYGFNTILIDELRDNTDQIISSSKIRTELTNGNVH 180

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NAAHLLGY FTIES V+HG+KIGRTLGFPTANMQLS +  LKEGVY I FRTQD+ SY+G
Sbjct: 181 NAAHLLGYHFTIESKVVHGKKIGRTLGFPTANMQLSSETSLKEGVYTIHFRTQDKISYNG 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +ANFGRNPT++ NGPLLLESFIFDFSQEIYGQ C VSFFD+LRPEIKFKD+++L+ +  +
Sbjct: 241 IANFGRNPTVIQNGPLLLESFIFDFSQEIYGQTCAVSFFDFLRPEIKFKDLQELQKHTQK 300

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DEKKARK+LE+  PLSERDRIICF
Sbjct: 301 DEKKARKLLENYQPLSERDRIICF 324


>gi|148558674|ref|YP_001257248.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ovis ATCC 25840]
 gi|148369959|gb|ABQ62831.1| riboflavin biosynthesis protein RibF [Brucella ovis ATCC 25840]
          Length = 329

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQKSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|254712055|ref|ZP_05173866.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M644/93/1]
 gi|254715124|ref|ZP_05176935.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M13/05/1]
 gi|261216833|ref|ZP_05931114.1| riboflavin biosynthesis protein RibF [Brucella ceti M13/05/1]
 gi|261319700|ref|ZP_05958897.1| riboflavin biosynthesis protein RibF [Brucella ceti M644/93/1]
 gi|260921922|gb|EEX88490.1| riboflavin biosynthesis protein RibF [Brucella ceti M13/05/1]
 gi|261292390|gb|EEX95886.1| riboflavin biosynthesis protein RibF [Brucella ceti M644/93/1]
          Length = 329

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDTFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|17989389|ref|NP_542022.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 1 str. 16M]
 gi|161620278|ref|YP_001594164.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           canis ATCC 23365]
 gi|163844388|ref|YP_001622043.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis ATCC 23445]
 gi|225628662|ref|ZP_03786696.1| riboflavin biosynthesis protein RibF [Brucella ceti str. Cudo]
 gi|237816707|ref|ZP_04595699.1| riboflavin biosynthesis protein RibF [Brucella abortus str. 2308 A]
 gi|254691369|ref|ZP_05154623.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 6 str. 870]
 gi|254695331|ref|ZP_05157159.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698427|ref|ZP_05160255.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254699491|ref|ZP_05161319.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis bv. 5 str. 513]
 gi|254702615|ref|ZP_05164443.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis bv. 3 str. 686]
 gi|254706254|ref|ZP_05168082.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis M163/99/10]
 gi|254711452|ref|ZP_05173263.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis B2/94]
 gi|254731874|ref|ZP_05190452.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 4 str. 292]
 gi|256029917|ref|ZP_05443531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           pinnipedialis M292/94/1]
 gi|256158086|ref|ZP_05456004.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti M490/95/1]
 gi|256252959|ref|ZP_05458495.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           ceti B1/94]
 gi|256256554|ref|ZP_05462090.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 9 str. C68]
 gi|260166981|ref|ZP_05753792.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           sp. F5/99]
 gi|260544381|ref|ZP_05820202.1| riboflavin kinase/FAD synthetase [Brucella abortus NCTC 8038]
 gi|260568477|ref|ZP_05838946.1| riboflavin kinase/FAD synthetase [Brucella suis bv. 4 str. 40]
 gi|260756981|ref|ZP_05869329.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 6 str.
           870]
 gi|260759645|ref|ZP_05871993.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 4 str.
           292]
 gi|260762888|ref|ZP_05875220.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882792|ref|ZP_05894406.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 9 str.
           C68]
 gi|261215702|ref|ZP_05929983.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220052|ref|ZP_05934333.1| riboflavin biosynthesis protein RibF [Brucella ceti B1/94]
 gi|261313697|ref|ZP_05952894.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M163/99/10]
 gi|261319061|ref|ZP_05958258.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis B2/94]
 gi|261749946|ref|ZP_05993655.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 5 str. 513]
 gi|261753199|ref|ZP_05996908.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 3 str. 686]
 gi|261756368|ref|ZP_06000077.1| riboflavin kinase/FAD synthetase [Brucella sp. F5/99]
 gi|265986935|ref|ZP_06099492.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M292/94/1]
 gi|265996601|ref|ZP_06109158.1| riboflavin biosynthesis protein RibF [Brucella ceti M490/95/1]
 gi|297249910|ref|ZP_06933611.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 5 str.
           B3196]
 gi|17985263|gb|AAL54286.1| riboflavin kinase / fmn adenylyltransferase [Brucella melitensis
           bv. 1 str. 16M]
 gi|161337089|gb|ABX63393.1| riboflavin biosynthesis protein RibF [Brucella canis ATCC 23365]
 gi|163675111|gb|ABY39221.1| riboflavin biosynthesis protein RibF [Brucella suis ATCC 23445]
 gi|225616508|gb|EEH13556.1| riboflavin biosynthesis protein RibF [Brucella ceti str. Cudo]
 gi|237787520|gb|EEP61736.1| riboflavin biosynthesis protein RibF [Brucella abortus str. 2308 A]
 gi|260097652|gb|EEW81526.1| riboflavin kinase/FAD synthetase [Brucella abortus NCTC 8038]
 gi|260155142|gb|EEW90223.1| riboflavin kinase/FAD synthetase [Brucella suis bv. 4 str. 40]
 gi|260669963|gb|EEX56903.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 4 str.
           292]
 gi|260673309|gb|EEX60130.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677089|gb|EEX63910.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 6 str.
           870]
 gi|260872320|gb|EEX79389.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 9 str.
           C68]
 gi|260917309|gb|EEX84170.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918636|gb|EEX85289.1| riboflavin biosynthesis protein RibF [Brucella ceti B1/94]
 gi|261298284|gb|EEY01781.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis B2/94]
 gi|261302723|gb|EEY06220.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M163/99/10]
 gi|261736352|gb|EEY24348.1| riboflavin kinase/FAD synthetase [Brucella sp. F5/99]
 gi|261739699|gb|EEY27625.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 5 str. 513]
 gi|261742952|gb|EEY30878.1| riboflavin biosynthesis protein RibF [Brucella suis bv. 3 str. 686]
 gi|262550898|gb|EEZ07059.1| riboflavin biosynthesis protein RibF [Brucella ceti M490/95/1]
 gi|264659132|gb|EEZ29393.1| riboflavin biosynthesis protein RibF [Brucella pinnipedialis
           M292/94/1]
 gi|297173779|gb|EFH33143.1| riboflavin biosynthesis protein RibF [Brucella abortus bv. 5 str.
           B3196]
          Length = 329

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|239833542|ref|ZP_04681870.1| riboflavin biosynthesis protein RibF [Ochrobactrum intermedium LMG
           3301]
 gi|239821605|gb|EEQ93174.1| riboflavin biosynthesis protein RibF [Ochrobactrum intermedium LMG
           3301]
          Length = 344

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 203/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRT 61
           F  +    SLP HL   VVAIGNFDG+H GH  +LE+A++I      P  VL+F PHPR+
Sbjct: 21  FQRLSGTDSLPGHLHNCVVAIGNFDGVHRGHQAVLERALEIAEKRGLPAVVLTFEPHPRS 80

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +  +PI  L+    + +IL  MGF A++   FT+E ++ SAE F++ +LVE L    V
Sbjct: 81  FFKPDAPIDRLTAAPRKAEILRLMGFDAVVEQPFTVEFSSRSAEDFVEHILVERLHASCV 140

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    LQK GE  GF    +D   +    +VSS+ IR  L +G V  
Sbjct: 141 VTGYDFHFGKGRRGTPEFLQKAGETAGFTVTLVDAFTDEGDNLVSSTRIRNLLCEGDVAQ 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ +  +VIHG+K+GRTLGFPTANMQ+     LK G+YA+RFR  +   + GV
Sbjct: 201 AAGLLGYRYMVCGEVIHGKKLGRTLGFPTANMQIDAQAGLKHGIYAVRFRRANGDLHDGV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+  +G  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L   M  D
Sbjct: 261 ASFGRRPTVDSDGSPLLETFLFDFSDDLYGETACVSFFGFLRGEIKFDGLDPLIDQMKRD 320

Query: 302 EKKARKILESSYPLSERDRIICF 324
           + +AR +L  + PLSE DR++ F
Sbjct: 321 DAEARALLAGAKPLSELDRLLSF 343


>gi|256059566|ref|ZP_05449765.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           neotomae 5K33]
 gi|261323534|ref|ZP_05962731.1| riboflavin biosynthesis protein RibF [Brucella neotomae 5K33]
 gi|261299514|gb|EEY03011.1| riboflavin biosynthesis protein RibF [Brucella neotomae 5K33]
          Length = 329

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 146/323 (45%), Positives = 201/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  ++E+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVMERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|306845517|ref|ZP_07478086.1| riboflavin biosynthesis protein RibF [Brucella sp. BO1]
 gi|306273838|gb|EFM55665.1| riboflavin biosynthesis protein RibF [Brucella sp. BO1]
          Length = 329

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 202/323 (62%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF  + +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVMLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|218682200|ref|ZP_03529801.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli CIAT 894]
          Length = 327

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 220/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I+     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLSRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDHEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGS 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA++GR PT+  NG  LLE+++FDFS ++YGQRC VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DGVASYGRRPTVTANGAPLLETYLFDFSGDLYGQRCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLSGVTPLGELDRKLCF 326


>gi|306840971|ref|ZP_07473712.1| riboflavin biosynthesis protein RibF [Brucella sp. BO2]
 gi|306289028|gb|EFM60293.1| riboflavin biosynthesis protein RibF [Brucella sp. BO2]
          Length = 329

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/323 (44%), Positives = 200/323 (61%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A        VL+F PHPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRLAVVLTFEPHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +L+E L    V
Sbjct: 66  FFKQGQPVDRLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILIEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIEQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|209548080|ref|YP_002279997.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533836|gb|ACI53771.1| riboflavin biosynthesis protein RibF [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 327

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I+     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G+ YGF    ID  R+  + + SSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQRC VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLSGVQPLGELDRKLCF 326


>gi|241203266|ref|YP_002974362.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240857156|gb|ACS54823.1| riboflavin biosynthesis protein RibF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 327

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I+     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLSRALEISKARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GFSA+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFSAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G  YGF    ID  R+  + +VSSS+IR  L +G+
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGHTYGFGVTLIDAFRDENADVVSSSHIRALLKEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL   DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGALDRKLCF 326


>gi|294853216|ref|ZP_06793888.1| riboflavin biosynthesis protein RibF [Brucella sp. NVSL 07-0026]
 gi|294818871|gb|EFG35871.1| riboflavin biosynthesis protein RibF [Brucella sp. NVSL 07-0026]
          Length = 329

 Score =  387 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/323 (45%), Positives = 200/323 (61%), Gaps = 2/323 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F  +   + LP  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F  HPR+
Sbjct: 6   FQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFELHPRS 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             +   P+  L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V
Sbjct: 66  FFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRV 125

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  
Sbjct: 126 VTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAE 185

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GV
Sbjct: 186 AAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGV 245

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +D
Sbjct: 246 ASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQD 305

Query: 302 EKKARKILESSYPLSERDRIICF 324
           E +AR +L    P+S  DR++ F
Sbjct: 306 EAQARALLADVRPISGLDRMLSF 328


>gi|256014986|ref|YP_003104995.1| hypothetical protein BMI_II197 [Brucella microti CCM 4915]
 gi|255997646|gb|ACU49333.1| hypothetical protein BMI_II197 [Brucella microti CCM 4915]
          Length = 315

 Score =  387 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/314 (46%), Positives = 198/314 (63%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIF 70
           +P  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+  +   P+ 
Sbjct: 1   MPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVD 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V+TG  F FG
Sbjct: 61  RLTDAAEKAEILRLMGFDAVVEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  AA LLGYR+
Sbjct: 121 KGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRY 180

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+
Sbjct: 181 RICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTV 240

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +DE +AR +L 
Sbjct: 241 DDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLA 300

Query: 311 SSYPLSERDRIICF 324
              P+S  DR++ F
Sbjct: 301 DVRPISGLDRMLSF 314


>gi|116250660|ref|YP_766498.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255308|emb|CAK06383.1| putative riboflavin biosynthesis protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 327

 Score =  387 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E  + LP HLKGGV+AIGNFDG+H GH  +L +A++I      P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPPHLKGGVIAIGNFDGVHRGHQSVLSRALEISKTRGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GFSA+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFSAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R G    L   G  YGF    ID  R+  + +VSSS+IR  L +G+
Sbjct: 121 SEVVTGFDFHFGRGREGGPAFLMNAGHTYGFGVTLIDAFRDENADVVSSSHIRALLKEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P++ L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVDLAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL   D+ +CF
Sbjct: 301 KRDEEEARALLAGVKPLGTLDQKLCF 326


>gi|218673797|ref|ZP_03523466.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli GR56]
          Length = 327

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HLKGGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IRT L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRTLLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGELDRKLCF 326


>gi|23499962|ref|NP_699402.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           suis 1330]
 gi|62317148|ref|YP_223001.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269131|ref|YP_418422.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis biovar Abortus 2308]
 gi|189022407|ref|YP_001932148.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           abortus S19]
 gi|23463542|gb|AAN33407.1| riboflavin biosynthesis protein RibF [Brucella suis 1330]
 gi|62197341|gb|AAX75640.1| RibF, riboflavin biosynthesis protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939405|emb|CAJ12359.1| Riboflavin kinase / FAD synthetase:Cytidyltransferase-related
           domain [Brucella melitensis biovar Abortus 2308]
 gi|189020981|gb|ACD73702.1| Riboflavin kinase / FAD synthetase [Brucella abortus S19]
          Length = 315

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 145/314 (46%), Positives = 198/314 (63%), Gaps = 2/314 (0%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIF 70
           +P  L   VVAIGNFDG+H GH  +LE+A+++A     P  VL+F PHPR+  +   P+ 
Sbjct: 1   MPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVD 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL  MGF A++   FT E +  SAE F+Q +LVE L    V+TG  F FG
Sbjct: 61  RLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R G    L + G+K GF    +D   +    +VSS+ IR  L++G V  AA LLGYR+
Sbjct: 121 KGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRY 180

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I  +VIHG+K+GRTLGFPTANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+
Sbjct: 181 RICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTV 240

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G  LLE+F+FDFS ++YG+   VSFF +LR E+KF  ++ L   M +DE +AR +L 
Sbjct: 241 DDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLA 300

Query: 311 SSYPLSERDRIICF 324
              P+S  DR++ F
Sbjct: 301 DVRPISGLDRMLSF 314


>gi|325292068|ref|YP_004277932.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium sp. H13-3]
 gi|325059921|gb|ADY63612.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium sp. H13-3]
          Length = 326

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VFH  E  + LP  L+GGV+AIGNFDG+H GH  +L++A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKEPLPEGLRGGVIAIGNFDGVHRGHRAVLDRALELAEARGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +  +P+F L+P  ++ +ILE +GF ++I Y F  E +  SAE+F+  +LV+WL  
Sbjct: 61  PRSVFRPETPVFRLTPAPLKARILEAIGFRSVIEYPFDREFSQRSAEEFVNSILVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G++ GF    +D  R+  + +VSSS IR+ L +G 
Sbjct: 121 SAVVTGFDFHFGKGREGGPAFLMAAGKRNGFDVTLVDAFRDEGADVVSSSRIRSLLCEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA  LGYRFT+ES+VI G+K+GRTLG+PTANM LSP+  LK G+YA+RFR  D   Y
Sbjct: 181 VAGAAGQLGYRFTLESEVIGGQKLGRTLGYPTANMALSPETELKAGIYAVRFRRPDGAIY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+++FDFS ++YG+ C+VSFF +LR E+KF  ++ L   +
Sbjct: 241 DGVASFGYRPTVTDNGAALLETYVFDFSGDLYGEVCSVSFFGHLRDELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLSE D  I F
Sbjct: 301 RRDEEEARAMLSGVRPLSELDAKIAF 326


>gi|190890538|ref|YP_001977080.1| riboflavin kinase/FMN adenylyltransferase [Rhizobium etli CIAT 652]
 gi|190695817|gb|ACE89902.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CIAT 652]
          Length = 327

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPVHLRGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQAPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSQVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQLCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 KRDEEEARALLAGVKPLGELDRKLCF 326


>gi|327191134|gb|EGE58179.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CNPAF512]
          Length = 327

 Score =  384 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F +E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDVEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSQVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYIRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLS  D  +CF
Sbjct: 301 KRDEEEARALLAGVKPLSALDGKLCF 326


>gi|110632785|ref|YP_672993.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mesorhizobium sp. BNC1]
 gi|110283769|gb|ABG61828.1| FMN adenylyltransferase [Chelativorans sp. BNC1]
          Length = 330

 Score =  384 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/326 (46%), Positives = 209/326 (64%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  F  +   Q++P HL+G VVAIGNFDG+H GH  +LE+A++IA+    P  VL+F PH
Sbjct: 1   MADFLRLSGYQNVPAHLRGAVVAIGNFDGVHRGHQAVLERALEIAHSQGLPAVVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + +   P+F L+P  ++ ++L+ +GF A++   FT E +  SAE+F+ +VLV  L  
Sbjct: 61  PRAVFRPDIPLFRLTPAPMKARLLQALGFDAVVEQSFTREFSTLSAERFVAEVLVGGLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F +GK R G    L   G+ YGF T  +D   +   ++VSSS IR  L +G+
Sbjct: 121 SHVVTGIDFHYGKGRGGSPQTLAAAGQGYGFGTTLVDAFCDEGGEVVSSSRIRALLAEGN 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+T+E++V  G+K+GRTLGFPTANM L  +  L  G+YA+RFR  + T Y
Sbjct: 181 VAEAAGLLGYRYTVEAEVTGGKKLGRTLGFPTANMSLPEEAALHHGIYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVANFGR PT+  NG  LLE+F+F F  ++YG+ C+VS F +LR E KF  ++ L   M
Sbjct: 241 DGVANFGRRPTVDENGAALLETFVFGFDGDLYGETCSVSLFGFLRGEEKFDGLDALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLSE D  I F
Sbjct: 301 KRDEEEARALLSGVRPLSELDFRIAF 326


>gi|86356477|ref|YP_468369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli CFN 42]
 gi|86280579|gb|ABC89642.1| riboflavin kinase/FMN adenylyltransferase protein [Rhizobium etli
           CFN 42]
          Length = 327

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 216/326 (66%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHRSVLNRALEIARARSIPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE +GF+A+I Y F  E +  SA+ FI  +L +WL  
Sbjct: 61  PRTVFRPQTPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G 
Sbjct: 121 SEVVTGFDFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRALLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   A +LGY +T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +
Sbjct: 181 VSEVAGMLGYHYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+F+FDFS ++YGQ C VSFF +LRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTENGAPLLETFLFDFSGDLYGQLCAVSFFGFLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PL E DR +CF
Sbjct: 301 RRDEEEARALLAGVKPLGELDRKLCF 326


>gi|15888028|ref|NP_353709.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Agrobacterium tumefaciens str. C58]
 gi|15155644|gb|AAK86494.1| riboflavin biosynthesis bifunctional protein [Agrobacterium
           tumefaciens str. C58]
          Length = 326

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 221/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VFH  E  + LP  L+GGV+AIGNFDG+H GH  +L++A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKEPLPEALRGGVIAIGNFDGVHRGHRAVLDRALELAEARGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +  +P+F L+P  ++ +ILE +GF ++I Y F  E +  SA++F+Q +LV+WL  
Sbjct: 61  PRSVFRPDTPVFRLTPAPLKARILEAIGFRSVIEYPFDREFSQRSADEFVQSILVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G+++GF    +D  R+  S +VSSS IR+ L +G 
Sbjct: 121 SAVVTGFDFHFGKGREGGPAFLMAAGKRHGFDVTLVDAFRDEGSDVVSSSRIRSLLCEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+VI G+K+GRTLG+PTANM L+P+  LK G+YA+RFR  D + +
Sbjct: 181 VAGAAGLLGYRFTVESEVIGGQKLGRTLGYPTANMALAPETELKAGIYAVRFRRLDGSIH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+F+FDFS ++YG+ C+VSFF +LR E+KF  ++ L   +
Sbjct: 241 DGVASFGYRPTVTENGAALLETFLFDFSGDLYGEVCSVSFFGHLRDELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++AR +L    PLS+ D  I F
Sbjct: 301 RRDEEEARAMLSGVRPLSQLDAKIAF 326


>gi|222106807|ref|YP_002547598.1| riboflavin biosynthesis protein RibF [Agrobacterium vitis S4]
 gi|221737986|gb|ACM38882.1| riboflavin biosynthesis protein RibF [Agrobacterium vitis S4]
          Length = 326

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 212/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP+ LKGGVVAIGNFDG+H GH  +LE+A+++A     P  VL+F PH
Sbjct: 1   MTVFHRNEKKTPLPDSLKGGVVAIGNFDGVHRGHQSVLERALELARQRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +     P+F L+P  ++ ++LE MGF ++I Y F  E +  SAE F++ VLV+WL  
Sbjct: 61  PRAVFTPQDPVFRLTPAPLKARLLEAMGFQSVIEYPFDREFSQRSAEDFVKTVLVDWLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   G +YGF    +D  R+  +++VSS+ IR  L KG 
Sbjct: 121 AQVVTGFDFHFGKGREGGPAFLMGMGAQYGFGVTLLDAFRDENAEVVSSTRIRGLLAKGA 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +   A LLGYRFT+E++VI G+++GRTLGFPTANM LSP+  L+ G+YA+R R  D + +
Sbjct: 181 ISEVAGLLGYRFTVEAEVIKGQQLGRTLGFPTANMALSPETTLRPGIYAVRLRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LR E KF+ ++ L   +
Sbjct: 241 DGVASFGYRPTVTENGAALLETFVFDFSGDLYGEICGVSFFGHLRDEWKFEGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             D ++AR +L    PL E DR I F
Sbjct: 301 NIDAEEARALLAGVKPLGELDRKITF 326


>gi|222085007|ref|YP_002543536.1| riboflavin biosynthesis protein RibF [Agrobacterium radiobacter
           K84]
 gi|221722455|gb|ACM25611.1| riboflavin biosynthesis protein RibF [Agrobacterium radiobacter
           K84]
          Length = 327

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 221/326 (67%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E  + LP+ LKGGV+AIGNFDG+H GH  +L++A++IA     P  VL+F PH
Sbjct: 1   MTVFHRNETREPLPDTLKGGVIAIGNFDGVHRGHQSVLDRALEIARERGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +   P+F ++P  ++ ++LE MGF+A+I Y F    +  SA++F+  +L++WL  
Sbjct: 61  PRTVFKPDHPVFRVTPAPLKARLLEAMGFNAVIEYPFDRAFSQRSADEFVHSILIDWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG DR G    L   G K+GF    ID  R+  + +VSSS IRT LT+G 
Sbjct: 121 SEVVTGFDFHFGHDRQGGPAFLMNAGSKHGFGVTLIDAFRDENADVVSSSRIRTLLTEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+T+E++VI GE++GRTLGFPTANM+L P++ LK G+YA+RFR  D    
Sbjct: 181 VAEAAGLLGYRYTVEAEVIGGEQLGRTLGFPTANMRLPPEVELKPGIYAVRFRAADGIIR 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA++GR PT+  NG  LLE+F+FDFS ++YGQ C+VSFF YLRPE+KF  ++ L   +
Sbjct: 241 DAVASYGRRPTVTDNGAPLLETFVFDFSGDLYGQICSVSFFGYLRPELKFDGLDPLVAQI 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
            +DE++AR +L    PL + DR I F
Sbjct: 301 RKDEEEARALLAGVRPLGDIDRAIAF 326


>gi|260463260|ref|ZP_05811461.1| riboflavin biosynthesis protein RibF [Mesorhizobium opportunistum
           WSM2075]
 gi|259030850|gb|EEW32125.1| riboflavin biosynthesis protein RibF [Mesorhizobium opportunistum
           WSM2075]
          Length = 326

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 211/326 (64%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F ++     LP  L+GGVVAIGNFDG+H GH  +LE+A+        P  VL+F PH
Sbjct: 1   MEAFQHLSATMPLPAELRGGVVAIGNFDGVHRGHQAVLERALAEAVRRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRTI +   P+F L+PP ++ ++L  +GF+AL+   FT + A+ SAE F+  VL   L +
Sbjct: 61  PRTIFRPDMPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFASLSAEAFVTDVLERTLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGK R G    L   GE++GF    +D  R+  +++VSSS IR  L  G 
Sbjct: 121 THAVTGFDFHFGKGRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRALLCDGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+L  +  L++G+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLPAEAALRQGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LR EIKF  ++ L + M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGEICQVSFFGFLRSEIKFDGLDALVVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +A+ +L    PLSE D  I F
Sbjct: 301 KRDEAEAKALLAGVEPLSELDSAIAF 326


>gi|150395636|ref|YP_001326103.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sinorhizobium medicae WSM419]
 gi|150027151|gb|ABR59268.1| riboflavin biosynthesis protein RibF [Sinorhizobium medicae WSM419]
          Length = 327

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 214/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E    LP HL+GGVVAIGNFDG+H GH  +L +A+        P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPGHLRGGVVAIGNFDGVHRGHQSVLNRALAEAVKRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE MGF A+I Y F    +  SA  FI ++L EWL  
Sbjct: 61  PRTVFRPETPVFRLTPAPLKARILEGMGFGAVIEYPFDRSFSELSAFDFIHRILREWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   GE+ GF    +D  R+  + ++SSS IR+ L +G 
Sbjct: 121 SHVVTGFDFHFGKGREGGPAFLMAAGEREGFGVTLVDAFRDENAAVISSSFIRSLLAEGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V +AA LLGYR+T+E++VI G+K+GRTLG+PTANM+L P+  LK G+YA+RFR  D + +
Sbjct: 181 VSHAAGLLGYRYTVEAEVIGGKKLGRTLGYPTANMRLPPEAELKSGIYAVRFRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  +G  LLE+F+FDFS ++YG+ C VSFF  LR E+KF  +E+L + M
Sbjct: 241 DGVASFGRRPTVDSDGEALLETFVFDFSADLYGEICAVSFFGRLRDELKFDGLEQLMVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR ++    PLS+ DR + F
Sbjct: 301 RSDESEARALIAGVQPLSDIDRRLTF 326


>gi|15964549|ref|NP_384902.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sinorhizobium meliloti 1021]
 gi|307314739|ref|ZP_07594335.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti
           BL225C]
 gi|307320033|ref|ZP_07599454.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti AK83]
 gi|15073727|emb|CAC45368.1| Probable riboflavin biosynthesis protein RibF includes: riboflavin
           kinase and FMN adenylyltransferase [Sinorhizobium
           meliloti 1021]
 gi|306894248|gb|EFN25013.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti AK83]
 gi|306898963|gb|EFN29609.1| riboflavin biosynthesis protein RibF [Sinorhizobium meliloti
           BL225C]
          Length = 327

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 212/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VFH  E    LP HL+GGVVAIGNFDG+H GH  +L +A++       P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPEHLRGGVVAIGNFDGVHRGHQSVLNRALEEAVKRAVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  +P+F L+P  ++ +ILE MGF A+I Y F    +  SA  FI  +L EWL  
Sbjct: 61  PRTVFRPDTPVFRLTPAPLKARILEGMGFGAVIEYPFDRSFSELSASDFIHSILREWLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGK R G    L   GE+ GF    +D  R+  + ++SSS IR+ L  G 
Sbjct: 121 SHVVTGFDFHFGKGREGGPAFLMAAGEREGFGVTLVDAFRDENAAVISSSFIRSLLADGD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V +AA LLGYR+T+E++VI G+K+GRTLG+PTANM+L P+  LK G+YA+RFR  D + +
Sbjct: 181 VPHAAGLLGYRYTVEAEVIDGKKLGRTLGYPTANMRLPPEAELKSGIYAVRFRRADGSLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  +G  LLE+F+FDFS ++YG+ C VSFF  LR E+KF  +E L + M
Sbjct: 241 DGVASFGRRPTVDSDGEALLETFVFDFSADLYGEICAVSFFGRLRDELKFDGLEPLMVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
            +DE +AR +L    PLS  DR + F
Sbjct: 301 RKDESEARALLAGVQPLSGIDRRLNF 326


>gi|218663009|ref|ZP_03518939.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli IE4771]
          Length = 322

 Score =  377 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/319 (48%), Positives = 212/319 (66%), Gaps = 2/319 (0%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS 65
           E    LP HLKGGV+AIGNFDG+H GH  +L +A++IA     P  VL+F PHPRT+ + 
Sbjct: 3   ETRNPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEIARARGIPALVLTFEPHPRTVFRP 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +P+F L+P  ++ +ILE +GF A+I Y F  E +  SA+ FI  +L +WL    V+TG 
Sbjct: 63  QTPVFRLTPAPLKARILETLGFKAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGF 122

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG++R G    L   G+ YGF    ID  R+  + +VSSS+IR  L +G V   A +
Sbjct: 123 DFHFGRNREGGPAFLMNAGQTYGFGVTLIDAFRDENADVVSSSHIRMLLKEGDVSEVAGM 182

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+YA+RFR QD T +  VA++G
Sbjct: 183 LGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLHDAVASYG 242

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           R PT+  NG  LLE+F+FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +  DE++A
Sbjct: 243 RRPTVTENGAPLLETFLFDFSGDLYGQFCAVSFFGYIRPELKFDGLDPLVAQIKRDEEEA 302

Query: 306 RKILESSYPLSERDRIICF 324
           R +L    PL E DR +CF
Sbjct: 303 RALLAGVKPLGELDRKLCF 321


>gi|13476810|ref|NP_108379.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mesorhizobium loti MAFF303099]
 gi|14027571|dbj|BAB53840.1| riboflavin kinase; RibF [Mesorhizobium loti MAFF303099]
          Length = 326

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F ++     LP  L+GGVVAIGNFDG+H GH  +LE+A+      + P  VLSF PH
Sbjct: 1   MVGFQHLSATAPLPADLRGGVVAIGNFDGVHRGHQAVLERALAEAVQRDVPALVLSFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + +   P+F L+PP ++ ++L  +GF+AL+   FT + A  SAE F+  VL   L +
Sbjct: 61  PRKVFRPDIPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFAALSAEAFVTDVLERTLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGKDR G    L   GE++GF    +D  R+  +++VSSS IR  L  G 
Sbjct: 121 THAVTGFDFHFGKDRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRALLCDGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+L  +  LKEG+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLPAEATLKEGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+   VSFF +LR EIKF  ++ L + M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGETSEVSFFGFLRSEIKFDGLDALVVQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR +L    PLS+ D  I F
Sbjct: 301 KRDEAEARALLAGVKPLSQLDAAIAF 326


>gi|319784278|ref|YP_004143754.1| riboflavin biosynthesis protein RibF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170166|gb|ADV13704.1| riboflavin biosynthesis protein RibF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 326

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 212/326 (65%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F  I     LP  L+GGVVAIGNFDG+H GH  +LE+A         P  VL+F PH
Sbjct: 1   MAAFQRILATAPLPADLRGGVVAIGNFDGVHRGHQAVLERASAEAGRRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR I +   P+F L+PP ++ ++L  +GF+AL+   FT + A+ SAE F+  VL   L +
Sbjct: 61  PRKIFRPDIPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFASLSAEAFVTDVLETNLGI 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              +TG  F FGKDR G    L   GE++GF    +D  R+  +++VSSS IR  L +G 
Sbjct: 121 THAVTGFDFHFGKDRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRGLLGEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYRFT+ES+V+ G+++GRTLGFPTANM+LS +  L+EG+YA+RFR  D T +
Sbjct: 181 VAEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLSAEAALREGIYAVRFRRADGTLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT+  NG  LLE+F+FDFS ++YG+ C VSFF +LRPE+KF+ ++ L   M
Sbjct: 241 DGVASFGRRPTVDDNGAPLLETFVFDFSGDLYGEVCQVSFFGFLRPEVKFEGLDALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE +AR +L    PLS+ D  + F
Sbjct: 301 KRDEAEARALLAGVRPLSDLDAEMAF 326


>gi|319409210|emb|CBI82854.1| riboflavin biosynthesis protein RibF [Bartonella schoenbuchensis
           R1]
          Length = 330

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/326 (41%), Positives = 200/326 (61%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  F  ++ +  +P  L+G V+AIGNFDG+H GH  +L++A+      N P  VL+F PH
Sbjct: 1   MDNFLRLQGHTEIPEILRGAVLAIGNFDGVHRGHQAVLQKALDLARVKNKPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q S  I  L+P + + +I + +GF  ++   F  + A  SA++FI  VL +  +V
Sbjct: 61  PRSFFQGSDCIDRLTPATEKAEIFKILGFHGVVEEPFDAQFAALSADEFISVVLKQAFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+ R+G+   L+++GE+ GF  V I  L   + + +SSS IR  L++G 
Sbjct: 121 CVVVTGDNFHFGRKRSGNAQFLRQKGEECGFEVVQIPSLCTLQGEKISSSFIRQLLSQGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S VIHG+K+GR+LGFPT N  L     L  GVYA+R R      +
Sbjct: 181 VEKAAHLLGYHYRVRSKVIHGKKLGRSLGFPTTNQVLPSQTSLAHGVYAVRLRRLSGVLH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+V  G  LLE+++FDF+ ++Y + CTVSF  +LR + KF  +E LK  M
Sbjct: 241 DGVASFGCRPTIVDGGAPLLETYLFDFTDDLYDENCTVSFLQFLRGQKKFDGLELLKKQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE + + IL++  PLS  D+++ F
Sbjct: 301 QHDENETKAILKTIQPLSSLDQLLTF 326


>gi|163758406|ref|ZP_02165494.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hoeflea
           phototrophica DFL-43]
 gi|162284695|gb|EDQ34978.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hoeflea
           phototrophica DFL-43]
          Length = 329

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 208/324 (64%), Gaps = 6/324 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           FH++         LK GVVAIGNFDG+H GH  +L +A + A    +P +VL+F PHPRT
Sbjct: 5   FHDV---SGFAGELKHGVVAIGNFDGMHRGHQAVLARATETAASLGAPASVLTFEPHPRT 61

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           + +   P+F L+P  ++ +IL ++GF A+I + F+   ++ SA++F+  +L   L V+ V
Sbjct: 62  VFRPDEPVFRLTPAPMKARILGQLGFDAVIEHPFSKAFSSQSAQEFVTNILCGHLGVRHV 121

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK R G+   L + GE++GF    +D   +    +VSSS +R AL  G V  
Sbjct: 122 VTGFDFHFGKGREGNPDYLMQAGEQHGFGVTLVDAFSDENGDVVSSSRVREALAAGDVAL 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA LLGYR+ + ++++HG+K+GRTLG+PTANM L P+  L+ G+YA+RFR  +   Y GV
Sbjct: 182 AAGLLGYRYAVSAEILHGKKLGRTLGYPTANMALPPETALRPGIYAVRFRRANGAVYDGV 241

Query: 242 ANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           A+FGR PT+  +G  LLLE+++FDF+ ++YG+ CTVS   YLR E KF  ++ L   M  
Sbjct: 242 ASFGRRPTVDKDGADLLLETYLFDFAGDLYGETCTVSLVSYLRGEEKFDGLDPLVAQMKT 301

Query: 301 DEKKARKILESSYPLSERDRIICF 324
           DE +AR +LE+  PLS  D  + F
Sbjct: 302 DEAEARAVLETIAPLSPLDAALNF 325


>gi|253690015|ref|YP_003019205.1| riboflavin biosynthesis protein RibF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756593|gb|ACT14669.1| riboflavin biosynthesis protein RibF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 313

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 160/317 (50%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  +F    A   AE F+  +LV+ L V
Sbjct: 58  PLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDAETFVSFLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G + GF  +  D    N  + VSS+ +R AL++  
Sbjct: 118 KFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVISTDSFC-NGGKRVSSTAVREALSRDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      Q   
Sbjct: 177 LELAESLLGHPYCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGQEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVNGDKRQQLEVHLLDVTIDLYGRHIEVVLRKKIRNEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR       P+
Sbjct: 297 ADDVVTARTFFGLKTPV 313


>gi|50122798|ref|YP_051965.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613324|emb|CAG76775.1| riboflavin biosynthesis protein ribf [includes: riboflavin kinase;
           FMN adenylyltransferase] [Pectobacterium atrosepticum
           SCRI1043]
          Length = 313

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 159/317 (50%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  +F    A   AE F+  +L + L V
Sbjct: 58  PLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVRFDARFAANDAETFVSSLLAKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G + GF  +  D    N  + VSS+ +R AL++  
Sbjct: 118 KFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVISTDSFC-NGGKRVSSTAVREALSRDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      Q   
Sbjct: 177 LELAESLLGHPYCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGQEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVNGDKRQQLEVHLLDVTIDLYGRHIEVVLRKKIRNEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR       P+
Sbjct: 297 ADDVVTARTFFGLKTPV 313


>gi|240850953|ref|YP_002972353.1| riboflavin biosynthesis protein RibF [Bartonella grahamii as4aup]
 gi|240268076|gb|ACS51664.1| riboflavin biosynthesis protein RibF [Bartonella grahamii as4aup]
          Length = 322

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 136/317 (42%), Positives = 212/317 (66%), Gaps = 5/317 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
            P+  +G V+A+GNFDG+H GH ++L++A+        P+ VL+F PHPR+  Q S+P++
Sbjct: 2   FPSAWRGAVLALGNFDGVHCGHQVVLQKALDFARIKKKPVVVLTFEPHPRSFFQRSAPVY 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +I + +GF+ +I   F  + A  SA++FI+ +L E  +V  V+TG  F+FG
Sbjct: 62  RLTEAAEKAEIFKVLGFNGVIEQPFDAQFATLSADEFIKSILKEVFDVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             ++G+  +L +RGEKYGF  V +  +   ++++  I+SSS IR  L++G+V  AAHLLG
Sbjct: 122 HQKSGNVQLLCQRGEKYGFEVVQVPCVSRLQDSQQLIISSSFIRQLLSQGNVEKAAHLLG 181

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           Y + + S++I G+K+GR LGFPTAN  L   + L  GVYA+R R  +   Y GVA+FG  
Sbjct: 182 YHYRVCSNIIQGDKLGRLLGFPTANQMLPSQVRLAHGVYAVRLRRANGVLYDGVASFGCR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+V +G  LLE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M  DEKKA++
Sbjct: 242 PTVVKDGAPLLETYLFDFNDDLYGESCTVSFFQFLRGQEKFDGLEPLIAQMRRDEKKAKE 301

Query: 308 ILESSYPLSERDRIICF 324
           IL+ + PLS+ DR++ F
Sbjct: 302 ILKIAQPLSKLDRLLTF 318


>gi|229512428|ref|ZP_04401902.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TMA 21]
 gi|229519955|ref|ZP_04409385.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229525333|ref|ZP_04414738.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229338914|gb|EEO03931.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229343007|gb|EEO07995.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229350578|gb|EEO15524.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae TMA 21]
          Length = 455

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 134 MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 190

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 191 PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 250

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 251 KFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTQSFCLQQLR-VSSTAIREALAADQ 309

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 310 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 369

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 370 GGVANIGNRPTVDGV-RQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 428

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 429 ELDAEAARVWLRQLKGCS 446


>gi|229530487|ref|ZP_04419875.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           12129(1)]
 gi|229332260|gb|EEN97748.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           12129(1)]
          Length = 455

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 134 MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 190

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 191 PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 250

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 251 KFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTQSFCLQQLR-VSSTAIREALAADQ 309

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 310 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 369

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 370 GGVANIGNRPTVDGV-RQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 428

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 429 ELDAEAARVWLRQLKGCS 446


>gi|261346443|ref|ZP_05974087.1| riboflavin biosynthesis protein RibF [Providencia rustigianii DSM
           4541]
 gi|282565427|gb|EFB70962.1| riboflavin biosynthesis protein RibF [Providencia rustigianii DSM
           4541]
          Length = 312

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I   Q++ ++  G V+ IGNFDG+H GH ++L+           P  V+ F P 
Sbjct: 1   MELIRGI---QNIRSYHHGCVLTIGNFDGVHRGHQVLLQNLKLKGKQLGLPTVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L   G   L+  +F    A+ + E F+  +LV+ L V
Sbjct: 58  PLEFFTGDKAPARLTRLRDKVKYLADSGVDYLLCVEFNQHFASLTPEAFVSDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ GE+ GF     +   +     +SS+ IR A+ + +
Sbjct: 118 KYLAIGDDFRFGKNRMGDFTFLQQAGERLGFEVADTESFCD-SGIRISSTAIRKAIQENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A +LLG+ + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+          
Sbjct: 177 LVLAENLLGHTYCISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVHGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVSGKGT-QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLDALKEQI 295

Query: 299 GEDEKKARKILES 311
             D   AR+ L +
Sbjct: 296 ANDVVAAREYLAA 308


>gi|251788187|ref|YP_003002908.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dickeya
           zeae Ech1591]
 gi|247536808|gb|ACT05429.1| riboflavin biosynthesis protein RibF [Dickeya zeae Ech1591]
          Length = 313

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 157/317 (49%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLQACHYGCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L + G   L+   F    A   A+ FI  +LVE L V
Sbjct: 58  PLELFAPEKAPARLTRLRDKVKYLAQAGVDYLLCVTFDAGFAANHADTFISSLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G +  F  +      +   + VSS+ +R AL + +
Sbjct: 118 KFLVVGDDFRFGAGREGDFLLLQKAGAEQNFEVISTATFCS-SGKRVSSTAVREALAQDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG ++GRT+GFPTAN+ L   +    GVYA++     +T  
Sbjct: 177 LALAQELLGHPFSISGRVVHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGETPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVTGDKRQQLEVHLLDVTLDLYGRHIDVVMCKKLRSEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR+      P+
Sbjct: 297 ADDVVAAREFFGLKAPV 313


>gi|261212210|ref|ZP_05926496.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC341]
 gi|260838818|gb|EEX65469.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC341]
          Length = 322

 Score =  362 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 156/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +  +G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHQGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A      FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDPHTFIRDLLVARLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERKGNFALLQQAGQALGFEVVSTQSFCLQQLR-VSSTAIREALAADQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      QT +
Sbjct: 177 LSSAATMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKNCS 313


>gi|261823082|ref|YP_003261188.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261607095|gb|ACX89581.1| riboflavin biosynthesis protein RibF [Pectobacterium wasabiae
           WPP163]
          Length = 313

 Score =  362 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 159/317 (50%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L  H  G V+ IGNFDG+HLGH ++LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLRAHHYGCVLTIGNFDGVHLGHQMLLERLKQEGRARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A   A+ F+  +LV+ L V
Sbjct: 58  PLELFATEKAPARLTRLRDKVKYLAQAGVDYLLCVKFDACFAANDAQTFVSSLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G + GF  +  +    N  + VSS+ +R AL++  
Sbjct: 118 KFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVISTNSFC-NGGKRVSSTAVREALSRDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V HG+++GRT+GFPTAN+ L   +    GVYA+      +   
Sbjct: 177 LELAESLLGHPYCISGRVEHGKELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGEEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D +  +YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVNGDRRQQLEVHLLDVTMNLYGRHIEVVLRKKIRNEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR       P+
Sbjct: 297 ADDVVTARTFFGLKTPV 313


>gi|28897307|ref|NP_796912.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260363893|ref|ZP_05776641.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           K5030]
 gi|260876270|ref|ZP_05888625.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AN-5034]
 gi|260895078|ref|ZP_05903574.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           Peru-466]
 gi|28805516|dbj|BAC58796.1| riboflavin kinase/FMN adenylyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308088916|gb|EFO38611.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           Peru-466]
 gi|308093040|gb|EFO42735.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AN-5034]
 gi|308112949|gb|EFO50489.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           K5030]
 gi|328472069|gb|EGF42946.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           parahaemolyticus 10329]
          Length = 311

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 1   MELIRGI---HNIAPHHYGCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L V
Sbjct: 58  PMELFAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRLGNFAMLQEAGEKYGFEVVSTQSFCLQQLR-VSSTAIREALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LHAAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|212709128|ref|ZP_03317256.1| hypothetical protein PROVALCAL_00161 [Providencia alcalifaciens DSM
           30120]
 gi|212688040|gb|EEB47568.1| hypothetical protein PROVALCAL_00161 [Providencia alcalifaciens DSM
           30120]
          Length = 312

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I   Q++ ++  G V+ IGNFDG+H GH ++L+           P  V+ F P 
Sbjct: 1   MELIRGI---QNIRSYHHGCVLTIGNFDGVHRGHQVLLQNLKLKGKQLGLPTVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L   G   L+  +F    A+ + + F+  +LV+ L V
Sbjct: 58  PLEFFTGDKAPARLTRLRDKVKYLADSGVDYLLCVEFNQHFASLTPDAFVSDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ G+K+GF     +   +     VSS+ IR A+    
Sbjct: 118 KYLAIGDDFRFGKNRMGDFAFLQQAGQKFGFEVADTESFCD-SGVRVSSTAIRKAIQNND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG+ + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+          
Sbjct: 177 LPLAENLLGHTYRISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVHGLGDKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D   ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVSGKGT-QLEVHLIDAHMDLYGRHIDVVLRKKLRDEQRFASLDALKEQI 295

Query: 299 GEDEKKARKILES 311
             D   AR+ L +
Sbjct: 296 ANDVVAAREYLAA 308


>gi|153838775|ref|ZP_01991442.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ3810]
 gi|149747807|gb|EDM58697.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ3810]
          Length = 311

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 1   MELIRGI---HNIAPHHYGCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L V
Sbjct: 58  PMELFAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRLGNFAMLQEAGEKYGFEVVSTQSFCLKQLR-VSSTAIREALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LHAAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|328545059|ref|YP_004305168.1| riboflavin kinase/FMN adenylyltransferase protein [polymorphum
           gilvum SL003B-26A1]
 gi|326414801|gb|ADZ71864.1| Riboflavin kinase/FMN adenylyltransferase protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 333

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 131/318 (41%), Positives = 193/318 (60%), Gaps = 4/318 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  ++   + P HL+GGVVAIGNFDG+H GH  +L++A  +A     P+  ++F PHPRT
Sbjct: 9   FSLVDDLAAFPAHLRGGVVAIGNFDGVHRGHRAVLDEAAAVARATGEPVYAMTFEPHPRT 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   S P+F L+P  I+  ++E  G   L+   FT + A   A  F++ +L++ L ++  
Sbjct: 69  VFNPSRPVFRLTPAPIKAAVMEAFGLDGLLVVPFTHDFAGMEAADFVRGILIDTLRIRHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK RAG    L+  G  +GF    ++   +   +++SSS IR AL  G ++ 
Sbjct: 129 VTGYDFHFGKARAGTPDYLRNAGRDHGFGVNIVEAENDEGGEVISSSRIRAALADGDLVL 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+ +E  V HGEK GR LG+PTAN++L+P+  L+ G+YA++ +  D   + GV
Sbjct: 189 ANALLGYRWFVEGTVEHGEKRGRDLGYPTANLRLAPECTLRHGIYAVQVQV-DGQRHEGV 247

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+FGR P    NG  LLE+F+FDF+ ++YG+   VSF  +LRPE +F  IE L   M  D
Sbjct: 248 ASFGRRPMF-DNGAPLLETFLFDFAGDLYGRTMRVSFVSFLRPEARFDGIEALIAQMDRD 306

Query: 302 EKKARKILESSYPLSERD 319
             +AR  L S+ PLS  D
Sbjct: 307 SDEARAALASARPLSALD 324


>gi|121602494|ref|YP_989423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           bacilliformis KC583]
 gi|120614671|gb|ABM45272.1| riboflavin biosynthesis protein RibF [Bartonella bacilliformis
           KC583]
          Length = 330

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 134/326 (41%), Positives = 207/326 (63%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  F  ++    LP+ L+G V+AIGNFDG+H GH  +L++A++IA   N P  VL+F PH
Sbjct: 1   MTDFLRLQSYSMLPSVLRGAVLAIGNFDGVHRGHQQVLQKALEIARAQNKPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q+S+P++ L+  + + +I + +GF+ +I   F  + A+ SA+ F+  +L + L+V
Sbjct: 61  PRVFFQNSTPVYRLTEAAEKAEIFKVLGFNGVIEQPFDAQFASLSADDFVTTILKQDLDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F+FG  ++G+   L ++G++ GF  V +  +R+   Q +SSS IR  L +  
Sbjct: 121 SVVVTGDNFQFGCHKSGNVSFLSQKGKEEGFAVVQVSSVRSASGQTISSSLIRQLLAQKQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLGY + + SD+IHGEK+GR LGFPTAN  L     L  GVYA+R R      Y
Sbjct: 181 IEQAACLLGYHYRVRSDIIHGEKLGRLLGFPTANQALPYQTTLAHGVYAVRLRRAHGVLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FG  PT+V NG +LLE+++F+ ++E YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGVASFGCRPTIVENGEVLLETYVFNLAEEFYGESCTVSFLRFLRGQEKFDGVEPLIAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DE++A++++ +  PLS  D+ + F
Sbjct: 301 QRDEREAKEVITNVQPLSPLDQCLTF 326


>gi|262163907|ref|ZP_06031646.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus VM223]
 gi|262172242|ref|ZP_06039920.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus MB-451]
 gi|261893318|gb|EEY39304.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus MB-451]
 gi|262027435|gb|EEY46101.1| riboflavin kinase/FMN adenylyltransferase [Vibrio mimicus VM223]
          Length = 322

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 156/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERKGNFALLQQAGQAFGFEVVSTQSFC-LQQQRVSSTAIREALAADE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      QT  
Sbjct: 177 LTSAADMLGRNYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGIRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|260771784|ref|ZP_05880702.1| riboflavin kinase/FMN adenylyltransferase [Vibrio metschnikovii CIP
           69.14]
 gi|260613076|gb|EEX38277.1| riboflavin kinase/FMN adenylyltransferase [Vibrio metschnikovii CIP
           69.14]
          Length = 348

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 112/318 (35%), Positives = 160/318 (50%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L Q  + A   N P  V++F P 
Sbjct: 27  MELIRGI---HNIKPHHHGCVLTIGNFDGVHLGHQQVLSQVSQRAKQLNLPSVVMTFEPQ 83

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +S     L+    +   L K+G   L+   F    AN  A+ FI+ +LV  L V
Sbjct: 84  PMELFLTSKAPARLTRLRDKFVQLGKLGIDRLLCVNFNHRFANLEAQAFIRDLLVGQLGV 143

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R GD  +L++ GE+YGF  V        +S+ VSS+ IR AL    
Sbjct: 144 KFLVVGDDFCFGQGRKGDFAMLRQAGEQYGFEVVSTQSFCVQQSR-VSSTLIREALASDQ 202

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +          
Sbjct: 203 LATADTMLGRAYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEVYGLSTLPL 262

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V+    LR E KF   + LK  +
Sbjct: 263 GGVANIGQRPTVNGV-RQQLEVHLFDFQGNLYGKQLEVALLHKLRDEQKFASFDALKQQI 321

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L+  Y  S
Sbjct: 322 ELDAEAARVWLQQLYSES 339


>gi|229505698|ref|ZP_04395208.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae BX
           330286]
 gi|229508728|ref|ZP_04398221.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|229519522|ref|ZP_04408965.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC9]
 gi|229608717|ref|YP_002879365.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MJ-1236]
 gi|229344211|gb|EEO09186.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC9]
 gi|229354252|gb|EEO19182.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|229357921|gb|EEO22838.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae BX
           330286]
 gi|229371372|gb|ACQ61795.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MJ-1236]
          Length = 455

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 106/318 (33%), Positives = 153/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 134 MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 190

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 191 PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 250

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+   F  V        + + VSS+ IR AL    
Sbjct: 251 KFLVVGDDFCFGKERQGNFALLQQAGQALDFEVVSTQSFCLQQLR-VSSTAIREALAADQ 309

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 310 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 369

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 370 GGVANIGNRPTVDGV-RQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 428

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 429 ELDAEAARVWLRQLKGCS 446


>gi|258620349|ref|ZP_05715387.1| Riboflavin biosynthesis protein [Vibrio mimicus VM573]
 gi|258587228|gb|EEW11939.1| Riboflavin biosynthesis protein [Vibrio mimicus VM573]
          Length = 322

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 111/318 (34%), Positives = 156/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERKGNFALLQQAGQAFGFEVVSTQSFC-LQQQRVSSTAIREALAADE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + NAA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      QT  
Sbjct: 177 LTNAADMLGRNYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGIRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|183600975|ref|ZP_02962468.1| hypothetical protein PROSTU_04590 [Providencia stuartii ATCC 25827]
 gi|188019307|gb|EDU57347.1| hypothetical protein PROSTU_04590 [Providencia stuartii ATCC 25827]
          Length = 312

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I   Q++     G V+ IGNFDG+H GH ++L+   +       P  V+ F P 
Sbjct: 1   MELIRGI---QNIRACHHGCVLTIGNFDGVHRGHQVLLQNLKQKGEQLGLPSVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L   G   L+  +F    A+ + ++F+ ++LV+ L V
Sbjct: 58  PLEFFIGDKAPARLTRLRDKVKYLADSGIDYLLCVEFNQHFASLTPDEFVAELLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ G +YGF     +   +     +SS+ IR A+    
Sbjct: 118 KYLAIGDDFRFGKNRMGDFAFLQQAGSQYGFQVADTESFCD-SGLRISSTAIRKAIQDND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+          
Sbjct: 177 LALAETLLGHPYRISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVYGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVSGKGQ-QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLDALKEQI 295

Query: 299 GEDEKKARKILES 311
            +D   AR  L +
Sbjct: 296 AKDVIAARDYLAA 308


>gi|91227671|ref|ZP_01261948.1| hypothetical protein V12G01_13339 [Vibrio alginolyticus 12G01]
 gi|269966609|ref|ZP_06180690.1| Riboflavin biosynthesis protein [Vibrio alginolyticus 40B]
 gi|91188450|gb|EAS74744.1| hypothetical protein V12G01_13339 [Vibrio alginolyticus 12G01]
 gi|269828794|gb|EEZ83047.1| Riboflavin biosynthesis protein [Vibrio alginolyticus 40B]
          Length = 311

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 158/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +L+Q  + A+    P  V++F P 
Sbjct: 1   MELIRGI---HNINPRHHGCVLTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L V
Sbjct: 58  PMELFAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLQEAGEKYGFDVVSTQSFCLQQLR-VSSTAIRQALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LHSAQQMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|307132648|ref|YP_003884664.1| bifunctional riboflavin kinase/FAD synthetase [Dickeya dadantii
           3937]
 gi|306530177|gb|ADN00108.1| bifunctional riboflavin kinase/FAD synthetase [Dickeya dadantii
           3937]
          Length = 313

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 153/317 (48%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLQACHYGCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L + G   L+   F    A   A  FI  +LVE L V
Sbjct: 58  PLELFAPEKAPARLTRLRDKVKYLAQAGVDYLLCVTFDAGFAANHANTFISSLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G +  F  +      +   + VSS+ +R AL + +
Sbjct: 118 KFLVVGDDFRFGAGREGDFLLLQKAGAEQNFEVISTTTFCS-SGKRVSSTAVREALAQDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG ++GRT+GFPTAN+ L   +    GVYA++         
Sbjct: 177 LALAEELLGHPFSISGRVVHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGDAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVNGDKRQQLEVHLLDVALDLYGRHIDVVMCKKLRSEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
             D   AR+      P+
Sbjct: 297 ANDVVAAREFFGLKAPV 313


>gi|157368942|ref|YP_001476931.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           proteamaculans 568]
 gi|157320706|gb|ABV39803.1| riboflavin biosynthesis protein RibF [Serratia proteamaculans 568]
          Length = 312

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 158/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKQEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLEMFAADKAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAELLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G++YGF  +     R    Q +SS+ IR AL    
Sbjct: 118 KFLMVGDDFRFGATRQGDFPLLQKAGKEYGFEVISTPTFREGD-QRISSTAIRNALRDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPQPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   ARK      P+
Sbjct: 296 ANDVVTARKFFGLQTPV 312


>gi|254230239|ref|ZP_04923630.1| riboflavin biosynthesis protein RibF [Vibrio sp. Ex25]
 gi|151937219|gb|EDN56086.1| riboflavin biosynthesis protein RibF [Vibrio sp. Ex25]
          Length = 311

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 158/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +L+Q  + A+    P  V++F P 
Sbjct: 1   MELIRGI---HNITPRHHGCVLTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LVE L V
Sbjct: 58  PMELFAKDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLQEAGEKYGFDVVSTQSFCLQQLR-VSSTAIRQALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LHSAQQMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|258624721|ref|ZP_05719655.1| Riboflavin biosynthesis protein [Vibrio mimicus VM603]
 gi|258583008|gb|EEW07823.1| Riboflavin biosynthesis protein [Vibrio mimicus VM603]
          Length = 322

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 156/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERKGNFALLQQAGQAFGFEVVSTQSFC-LQQQRVSSTAIREALAADE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      QT  
Sbjct: 177 LTSAADMLGRNYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGIHQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|149192165|ref|ZP_01870385.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           shilonii AK1]
 gi|148834005|gb|EDL51022.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           shilonii AK1]
          Length = 311

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 113/313 (36%), Positives = 161/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L N   G V+ IGNFDG+HLGH  +LEQ  K A     P  V++F P 
Sbjct: 1   MELIRGI---HNLKNQHHGCVLTIGNFDGVHLGHQRVLEQVKKKALLLGLPAVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + ++LE M    L+   F    A+ S E FI+ +LV  L V
Sbjct: 58  PMELFAKDKAPARLTRLRDKFELLEAMHLDRLLCVNFNRRFASMSPESFIKDLLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGK R G+  +L+K GE++GF  V         ++ VSS+ IR AL   H
Sbjct: 118 KFLVIGDDFRFGKGREGNFDMLKKAGEEFGFEVVNTASFCVEDTR-VSSTAIRQALASDH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  +A +LG  +T+   V HG+K+ R  GFPTAN+ L   +    GVYA++    D    
Sbjct: 177 LDESAEMLGRHYTLSGRVAHGQKLARDFGFPTANISLKRYVSPVRGVYAVQVYGVDSQPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G+ PT+    P  LE  IFDF   +YG++  V+    +R E KF+ +E LK  +
Sbjct: 237 PGIANVGKKPTVAGTTPD-LEVHIFDFEGNLYGKQIEVALLHKIRDEKKFESLELLKQQI 295

Query: 299 GEDEKKARKILES 311
             D   AR  L  
Sbjct: 296 ELDADVARVWLRQ 308


>gi|270263901|ref|ZP_06192169.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           odorifera 4Rx13]
 gi|270042094|gb|EFA15190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Serratia
           odorifera 4Rx13]
          Length = 312

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 158/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MQLIRGV---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKQEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLEMFAADKAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAELLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK GE+YGF  +     R    Q +SS+ IR AL    
Sbjct: 118 KFLMVGDDFRFGAARQGDFPLLQKAGEEYGFEVISTPTFREGD-QRISSTAIRNALRDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LAQAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   ARK      P+
Sbjct: 296 ANDVVTARKFFGLQTPV 312


>gi|262401620|ref|ZP_06078186.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC586]
 gi|262352037|gb|EEZ01167.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. RC586]
          Length = 322

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 157/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F+P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFDPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+ +GF  V        + Q VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERKGNFALLQQAGQAFGFEVVSTQSFC-LQQQRVSSTAIREALAADE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +      QT  
Sbjct: 177 LTSAADMLGRNYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGQTPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGIRQQLEVHFFDFQGNLYGKQLEVALLHKLRDECKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|163868770|ref|YP_001609994.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           tribocorum CIP 105476]
 gi|161018441|emb|CAK01999.1| riboflavin biosynthesis protein RibF [Bartonella tribocorum CIP
           105476]
          Length = 327

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 135/322 (41%), Positives = 209/322 (64%), Gaps = 10/322 (3%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
            P+  +G V+A+GNFDG+H GH ++L++A+      N P  VL+F PHPR+  Q S+P++
Sbjct: 2   FPSAWRGVVLALGNFDGVHRGHQVVLQKALDFARIKNKPAVVLTFEPHPRSFFQHSAPVY 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +I + +GF  +I   F  + A  SA++FI+ +L E  +V  V+TG  F+FG
Sbjct: 62  RLTEAVEKAEIFKILGFDGVIEQPFDAQFAALSADEFIKSILKEAFDVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDEL--------RNNKSQIVSSSNIRTALTKGHVLNA 182
             ++G+  +L +RG++ GF  V +  +        ++++  I+SSS IR  L++G V  A
Sbjct: 122 HQKSGNVHLLCQRGKEDGFQVVQVSCVSDPSVSRHQDSQPLIISSSFIRQLLSQGEVDKA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           AHLLGY + + S++I G+K+GR LGFPTAN  L P + L  G+YA+R R  D   Y GVA
Sbjct: 182 AHLLGYHYRVCSNIIQGDKLGRLLGFPTANQMLPPQVRLAHGIYAVRLRRADGVLYDGVA 241

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG  PT+V +G  LLE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M  DE
Sbjct: 242 SFGCRPTVVKDGAPLLETYLFDFNDDLYGESCTVSFFQFLRGQEKFDGLEPLIAQMHRDE 301

Query: 303 KKARKILESSYPLSERDRIICF 324
           KKA++IL++  PLS+ DR++ F
Sbjct: 302 KKAKEILKTVQPLSQLDRLLTF 323


>gi|170025804|ref|YP_001722309.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|169752338|gb|ACA69856.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           YPIII]
          Length = 312

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 156/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLELFAADKAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQ+ G ++GF  +  D   +     +SS+ IR AL    
Sbjct: 118 KFLTVGDDFRFGAGRQGDFQLLQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++GRTLGFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LVLAETLLGHPYSISGRVVHGDELGRTLGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG    V     LR E +F  +E LK  +
Sbjct: 237 YGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 296 ANDVVTARTFFGLKTPV 312


>gi|319898614|ref|YP_004158707.1| riboflavin biosynthesis protein RibF [Bartonella clarridgeiae 73]
 gi|319402578|emb|CBI76123.1| riboflavin biosynthesis protein RibF [Bartonella clarridgeiae 73]
          Length = 330

 Score =  359 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 135/326 (41%), Positives = 205/326 (62%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M  F   +    LP   +GGV+AIGNFDG+HLGH  +L++A+ ++     P  VL+F PH
Sbjct: 1   MSDFLRFQEYNFLPLAWRGGVLAIGNFDGVHLGHQAVLQKALDLSREKKRPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  SA++FI  +L +  +V
Sbjct: 61  PKSFFQGSASVDRLTQAAEKAEIFKILGFHGVIEQPFDEQFSALSADEFITVILKQAFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L+++G++YGF  V I  L   + + +SSS IR  L KG 
Sbjct: 121 SVVVTGDNFRFGCQKSGNLNFLRQKGKEYGFEVVQIPCLCTRQKETISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   AHLLGY + + S+V+ GEK+GR LGFPTAN  L P   L  GVYA+RFR  +   +
Sbjct: 181 VSQVAHLLGYHYRVSSNVVQGEKLGRHLGFPTANQFLPPQTSLAHGVYAVRFRRANGALH 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+FGR PT+V NG  +LE+++F+F  ++YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGIASFGRRPTVVVNGAPVLETYLFNFDDDLYGENCTVSFLQFLRGQKKFDGLEPLITQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L++  PLS  DR++ F
Sbjct: 301 QHDEKEAQMVLKTKQPLSLLDRVLTF 326


>gi|22127575|ref|NP_670998.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis KIM 10]
 gi|45443438|ref|NP_994977.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51594967|ref|YP_069158.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108810057|ref|YP_653973.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Antiqua]
 gi|108810511|ref|YP_646278.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Nepal516]
 gi|145600413|ref|YP_001164489.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Pestoides F]
 gi|150260490|ref|ZP_01917218.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CA88-4125]
 gi|153948228|ref|YP_001402416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162420878|ref|YP_001605366.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis Angola]
 gi|165927256|ref|ZP_02223088.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937880|ref|ZP_02226441.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008814|ref|ZP_02229712.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212053|ref|ZP_02238088.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401586|ref|ZP_02307080.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418778|ref|ZP_02310531.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426070|ref|ZP_02317823.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469839|ref|ZP_02334543.1| riboflavin biosynthesis protein RibF [Yersinia pestis FV-1]
 gi|186893969|ref|YP_001871081.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|218927671|ref|YP_002345546.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CO92]
 gi|229836944|ref|ZP_04457109.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Pestoides A]
 gi|229840361|ref|ZP_04460520.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842441|ref|ZP_04462596.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229900700|ref|ZP_04515824.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Nepal516]
 gi|270487932|ref|ZP_06205006.1| riboflavin biosynthesis protein RibF [Yersinia pestis KIM D27]
 gi|21960681|gb|AAM87249.1|AE013973_8 putative regulator [Yersinia pestis KIM 10]
 gi|45438307|gb|AAS63854.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588249|emb|CAH19856.1| flavokinase and FAD synthetase (includes: riboflavin kinase and FMN
           adenyltransferase) [Yersinia pseudotuberculosis IP
           32953]
 gi|108774159|gb|ABG16678.1| riboflavin kinase / FMN adenylyltransferase [Yersinia pestis
           Nepal516]
 gi|108781970|gb|ABG16028.1| FMN adenylyltransferase / riboflavin kinase [Yersinia pestis
           Antiqua]
 gi|115346282|emb|CAL19153.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia pestis CO92]
 gi|145212109|gb|ABP41516.1| FMN adenylyltransferase / riboflavin kinase [Yersinia pestis
           Pestoides F]
 gi|149289898|gb|EDM39975.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           pestis CA88-4125]
 gi|152959723|gb|ABS47184.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353693|gb|ABX87641.1| riboflavin biosynthesis protein RibF [Yersinia pestis Angola]
 gi|165914292|gb|EDR32908.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920718|gb|EDR37966.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992153|gb|EDR44454.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206799|gb|EDR51279.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962772|gb|EDR58793.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167048968|gb|EDR60376.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054993|gb|EDR64793.1| riboflavin biosynthesis protein RibF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186696995|gb|ACC87624.1| riboflavin biosynthesis protein RibF [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682039|gb|EEO78131.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Nepal516]
 gi|229690751|gb|EEO82805.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696727|gb|EEO86774.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705887|gb|EEO91896.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           Pestoides A]
 gi|270336436|gb|EFA47213.1| riboflavin biosynthesis protein RibF [Yersinia pestis KIM D27]
 gi|320016962|gb|ADW00534.1| bifunctional riboflavin kinase/FAD synthetase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 312

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 156/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLELFAADKAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQ+ G ++GF  +  D   +     +SS+ IR AL    
Sbjct: 118 KFLTVGDDFRFGAGRQGDFQLLQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG    V     LR E +F  +E LK  +
Sbjct: 237 YGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 296 ANDVVTARTFFGLKTPV 312


>gi|123440979|ref|YP_001004968.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122087940|emb|CAL10728.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 312

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 156/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKREGQRLRLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L K G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLELFAADKAPARLTRLRDKARYLAKAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQ+ G ++GF  +  D   +     +SS+ IR AL    
Sbjct: 118 KFLTVGDDFRFGAGRQGDFQLLQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALYDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGSKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGI-RQQLEVHLLDVTMDLYGRHIDVVLCAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 296 AHDVVTARTFFGLKTPV 312


>gi|197283929|ref|YP_002149801.1| bifunctional riboflavin kinase/FMN adenyltransferase [Proteus
           mirabilis HI4320]
 gi|227358202|ref|ZP_03842543.1| FAD synthetase [Proteus mirabilis ATCC 29906]
 gi|194681416|emb|CAR40254.1| riboflavin biosynthesis protein (includes: riboflavin kinase and
           FMN adenyltransferase) [Proteus mirabilis HI4320]
 gi|227161538|gb|EEI46575.1| FAD synthetase [Proteus mirabilis ATCC 29906]
          Length = 313

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I   Q++     G V+ IGNFDG+H GH  +L+   +       P  V++F P 
Sbjct: 1   MELIRGI---QNIRAQHHGCVLTIGNFDGVHRGHQALLKHLKQEASRRGLPTVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L + G   L+  KF  + A  + E+F+  +LV+ L V
Sbjct: 58  PLEFFLPEKAPARLTRLRDKIKYLAECGIDYLLCVKFDKQFAAQTPEEFVSSLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+RAGD   LQ+ G +YGF     +   + K   +SS+ +R AL    
Sbjct: 118 KFLAIGDDFRFGKNRAGDFHFLQQAGARYGFEVANTESYCD-KGLRISSTAVREALFNDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT-S 237
           +  A  LLG+ +++   V+HG ++GRT+GFPTAN+ +   +    GVYA+     D    
Sbjct: 177 LALAESLLGHPYSVCGRVVHGNQLGRTIGFPTANIPMKRLVAPVAGVYAVDVYLADHQSP 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +GVAN G  PT+   G + LE  + D + ++YG+R  V     LR E +F  ++ LK  
Sbjct: 237 LAGVANIGSRPTVKGKG-VQLEVHLIDVNMDLYGRRIDVVLRKKLRNEQRFASLDALKQQ 295

Query: 298 MGEDEKKARKIL 309
           +  D   AR  L
Sbjct: 296 IANDVAAARDFL 307


>gi|121730023|ref|ZP_01682435.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae V52]
 gi|153215107|ref|ZP_01949814.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 1587]
 gi|153826783|ref|ZP_01979450.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-2]
 gi|153829356|ref|ZP_01982023.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 623-39]
 gi|254291959|ref|ZP_04962739.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           AM-19226]
 gi|121628227|gb|EAX60746.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae V52]
 gi|124114898|gb|EAY33718.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 1587]
 gi|148875139|gb|EDL73274.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 623-39]
 gi|149739434|gb|EDM53674.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-2]
 gi|150422098|gb|EDN14065.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae
           AM-19226]
 gi|327483481|gb|AEA77888.1| Riboflavin kinase [Vibrio cholerae LMA3894-4]
          Length = 322

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTQSFCLQQLR-VSSTAIREALAADQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 177 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|262191829|ref|ZP_06050000.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae CT
           5369-93]
 gi|297580805|ref|ZP_06942731.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC385]
 gi|262032316|gb|EEY50883.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae CT
           5369-93]
 gi|297535221|gb|EFH74056.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC385]
          Length = 322

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTQSFCLQQLR-VSSTAIREALAADQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 177 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGIRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|332160244|ref|YP_004296821.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664474|gb|ADZ41118.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863047|emb|CBX73179.1| riboflavin biosynthesis protein ribF [Yersinia enterocolitica
           W22703]
          Length = 312

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 155/317 (48%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L   G   L+  KF    A  +A+ F+ ++LVE L V
Sbjct: 58  PLELFAADKAPARLTRLRDKARYLANAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQ+ G ++GF  +  D   +     +SS+ IR AL    
Sbjct: 118 KFLTVGDDFRFGAGRQGDFQLLQQAGAEFGFDVISTDSFCD-SGLRISSTAIRQALYDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+        S 
Sbjct: 177 LVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPKSL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + E+YG    V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVTMELYGCHIDVVLRAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 296 ANDVVTARTFFGLKTPV 312


>gi|300724586|ref|YP_003713911.1| bifunctional flavokinase/ FAD synthetase [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631128|emb|CBJ91817.1| bifunctional: flavokinase; FAD synthetase [Xenorhabdus nematophila
           ATCC 19061]
          Length = 314

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 104/311 (33%), Positives = 152/311 (48%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  +L+   +  +    P  V+ F P 
Sbjct: 1   MELIRGI---HNIRSRHHGCVLTIGNFDGVHRGHQALLKHLKQEGLRLGLPTMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L + G   L+  KF    A+ S E FI ++LVE L V
Sbjct: 58  PLEVFVPDKAPARLTRLRDKIKYLAQNGVDYLLCVKFDKYFASNSPEAFISQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ G +Y F     D   ++  + +SS+ IR AL    
Sbjct: 118 KFLAIGDDFRFGKNRLGDFHYLQQAGNQYNFDVASTDSFCDSGFR-ISSTAIRQALQSND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG ++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAETLLGHPYSISGRVVHGNQLGRTIGFPTANLPLKRLVTPVKGVYAVEVHGLGDNPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D   ++YG    V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGNRPTVAGQGQ-QLEVHLIDAQMDLYGCHINVVLRKKLRDEQRFASLDALKQQI 295

Query: 299 GEDEKKARKIL 309
             D   AR  L
Sbjct: 296 ANDVVAARNYL 306


>gi|90419971|ref|ZP_01227880.1| riboflavin/FAD biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336012|gb|EAS49760.1| riboflavin/FAD biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 327

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 132/316 (41%), Positives = 187/316 (59%), Gaps = 3/316 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLIL--EQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
             +P  L+G VVA+GNFDG+H GH  +L   + I  A   P+  L+F PHPR++ +   P
Sbjct: 13  ADVPADLRGAVVAVGNFDGVHRGHQTVLGEARTIAAAAGRPLVCLTFEPHPRSVFRPDQP 72

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  L+P  ++ ++LE +GF A++   FT E A  + + F++ VLVE +    V+ G  F 
Sbjct: 73  VARLTPAPMKARLLEMLGFDAVVEQGFTREFAGLAPKAFVETVLVEAMGAHHVVAGFDFH 132

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G  R G    L + G  +GF    +    +   + VSSS IR  L +G V  AA LLGY
Sbjct: 133 YGAKRGGTPETLAEAGRMHGFGATLVPAFVDEGGETVSSSRIRDCLGEGAVTEAAGLLGY 192

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           R+TI  +V+ G K+GRTLG+PTANM + PD LLK G+YA+R R  D T + GVA+FGR P
Sbjct: 193 RWTIAGEVVGGAKLGRTLGYPTANMVIEPDSLLKHGIYAVRLRRADSTLHDGVASFGRRP 252

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   NG  L E+F+FDFS ++YG+  +VS F +LR E +F   E L   M  D  +AR +
Sbjct: 253 TF-DNGAALFETFLFDFSGDLYGETVSVSLFGFLRGEERFDGAEALIAQMDGDADEARAM 311

Query: 309 LESSYPLSERDRIICF 324
           L    PL + DR + F
Sbjct: 312 LAGVAPLGDLDRRMAF 327


>gi|269962528|ref|ZP_06176876.1| Riboflavin biosynthesis protein [Vibrio harveyi 1DA3]
 gi|269832723|gb|EEZ86834.1| Riboflavin biosynthesis protein [Vibrio harveyi 1DA3]
          Length = 323

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 158/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 13  MELIRGI---HNIKSRHHGCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 69

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LV  L V
Sbjct: 70  PMELFARDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGV 129

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 130 KFLVIGDDFCFGKGRTGNFAMLQEAGEKYGFEVVSTQSFCLQQLR-VSSTAIRKALARDD 188

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 189 LHSAQEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPI 248

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF  ++YG++  V     LR E KF+  E LK  +
Sbjct: 249 GGVANIGQRPTVNGV-RQQLEVHLFDFHADLYGKQLEVKLLHKLRDEQKFESFEALKQQI 307

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 308 VLDAEAARVWLRQ 320


>gi|114705801|ref|ZP_01438704.1| hypothetical protein FP2506_15084 [Fulvimarina pelagi HTCC2506]
 gi|114538647|gb|EAU41768.1| hypothetical protein FP2506_15084 [Fulvimarina pelagi HTCC2506]
          Length = 330

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 134/316 (42%), Positives = 190/316 (60%), Gaps = 4/316 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSP 68
           +  P  ++GGVVAIGNFDG+H GH  +LE+A++I  A N P+  L+F PHPRT+ +   P
Sbjct: 17  EDCPADIRGGVVAIGNFDGVHRGHRAVLEKAVEIGAAENKPLLCLTFEPHPRTVFKPDRP 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  ++P  ++ +IL  +GF A+I   FT + A  + E+F   VLVE L    V+ G  F 
Sbjct: 77  VARITPAPMKARILGLLGFDAVIEQPFTRDFAGIAPEKFEDDVLVEALGASHVVAGFDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G  R+G    L + G + GF    +    +   + VSSS IR AL +G V  AA LLGY
Sbjct: 137 YGAKRSGTPESLGRAGLRLGFGATLVPAFEDEGGETVSSSRIRAALREGRVEEAAGLLGY 196

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           RFTI  +++HG+K+GRTLGFPTAN+ L  + LL  G+YA+R R  D + + GVA++GR P
Sbjct: 197 RFTIRGEIVHGKKLGRTLGFPTANLVLQDE-LLAHGIYAVRLRRADGSLHDGVASYGRRP 255

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +G  L E+FIFDF+ ++YG+   V+    LR E KF     L   M  D ++AR +
Sbjct: 256 TF-DDGAALFETFIFDFAGDLYGETVEVALVSRLRGEAKFDSAGALVAQMDRDAEEARAV 314

Query: 309 LESSYPLSERDRIICF 324
           L    PLS  DR + F
Sbjct: 315 LAEIVPLSPLDRALSF 330


>gi|161936327|ref|YP_128815.2| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photobacterium profundum SS9]
          Length = 323

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 114/320 (35%), Positives = 163/320 (50%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++       V+ IGNFDG+HLGH  +L Q I  A     P TV++F P 
Sbjct: 1   MELIRGI---HNIKPRHHDCVLTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  + +    L+    +   L+K G   L+   F  + AN SAE F++++LVE L V
Sbjct: 58  PLELFAADNAPARLTRFRDKYTQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGK R G+  +L+  G+++GF  V        + Q VSS+ IR AL    
Sbjct: 118 KFLVVGDDFRFGKGRRGNFEMLEAAGQEFGFVVVSTQSFCMLE-QRVSSTAIRHALVNDQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D    
Sbjct: 177 LPLAASMLGRSYSISGRVSHGRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVFGVDGAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG +  V     LR EIKF+  + LK  +
Sbjct: 237 PGVANVGHRPTVNGV-RQQLEVHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
             D + AR  L     +  R
Sbjct: 296 ERDAQTARVWLSERNNVQLR 315


>gi|260596443|ref|YP_003209014.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cronobacter
           turicensis z3032]
 gi|260215620|emb|CBA27884.1| Riboflavin biosynthesis protein ribF [Cronobacter turicensis z3032]
          Length = 312

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L +   G V+ IGNFDG+H GH  +L            P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLTSEHHGCVLTIGNFDGVHRGHQALLSGLCAQGRERGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ F+  +LVE L V
Sbjct: 58  PLELFAADKAPARLTRLREKLRYLARCGVDYVLCIRFDRRFAALTAQNFVSDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K + TG  FRFG  R GD  +LQK G +YGF           +   +SS+ +R AL +  
Sbjct: 118 KFLATGDDFRFGAGREGDFLLLQKAGREYGFEVTSTQTFCE-EGVRISSTAVRQALAQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  F I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LSLAENLLGRPFAISGRVVHGDALGRTIGFPTANLPLRRQVSPVKGVYAVEVLGISDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVAIDLYGRHIDVVLRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             D   AR       P
Sbjct: 296 SRDVITARDFFGLPTP 311


>gi|330447397|ref|ZP_08311046.1| riboflavin biosynthesis protein RibF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491588|dbj|GAA05543.1| riboflavin biosynthesis protein RibF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 320

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 160/320 (50%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        ++     G V+ IGNFDG+HLGH  +L+Q +  A+    P TV++F P 
Sbjct: 1   MELIRG---THNIQPQHHGCVLTIGNFDGVHLGHQTLLQQVVAKAHAMQLPATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    L+    +   L+K+G   L+   F    AN SAE F++++LV+ L V
Sbjct: 58  PLELFAGDNAPARLTRFRDKYLQLKKVGIDRLLCISFNHHFANMSAEDFVERLLVKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGKDR G   +L   G K+GF  V       ++ Q VSS+ IR AL    
Sbjct: 118 KFLVIGDDFRFGKDRCGSFDMLVAAGLKHGFEVVSTQSFCVSE-QRVSSTAIRQALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+ FPTAN+ L   +    GVYA+          
Sbjct: 177 LEQAEMMLGRPYSITGRVSHGRKLGRTIDFPTANIPLKRRVTPVSGVYAVEVYGAASGPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG++  V     LR E KF+  + LK  +
Sbjct: 237 MGVANVGNRPTVKGV-RRQLEVHLFDFKADLYGRQLEVVLRHKLRDEKKFESFDALKCQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
             D + AR  L     +  R
Sbjct: 296 ERDAQTARVWLSERNNVQLR 315


>gi|90580544|ref|ZP_01236349.1| hypothetical protein VAS14_07439 [Vibrio angustum S14]
 gi|90438202|gb|EAS63388.1| hypothetical protein VAS14_07439 [Photobacterium angustum S14]
          Length = 320

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 158/320 (49%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q +  A+      TV++F P 
Sbjct: 1   MELIRGI---HNIQPQHHGCVLTIGNFDGVHLGHQALLRQVVAKAHAMQLTATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L+K+G   L+   F    A  SAE F++ +LV+ L V
Sbjct: 58  PLELFAGDKAPARLTRFRDKYLQLKKVGIDRLLCVNFNHHFATMSAEDFVECLLVKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG+ R GD  +L + G K+GF  V       ++ Q VSS+ IR AL    
Sbjct: 118 KFLVIGDDFRFGQGRNGDFSMLVEAGRKHGFEVVSTQSFCVSE-QRVSSTAIRQALANNE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D    
Sbjct: 177 LEQAEMMLGRPYSIRGRVSHGRKLGRTIGFPTANIPLKRRVTPVAGVYAVEVYGADSRPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG +  V     LR E KF+  + LK  +
Sbjct: 237 MGVANVGHRPTVKGV-RQQLEVHLFDFHADLYGHQLEVVLRHKLRDEKKFESFDALKSQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
             D + AR  L     +  R
Sbjct: 296 ERDAQTARVWLSERNNVQLR 315


>gi|218708569|ref|YP_002416190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           splendidus LGP32]
 gi|218321588|emb|CAV17540.1| Riboflavin biosynthesis protein ribF [Vibrio splendidus LGP32]
          Length = 311

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 112/311 (36%), Positives = 158/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKAQHHGCVLTIGNFDGVHLGHQEVLSQVSKQATALGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+  S L+   F    A+ SAE FI+ +LV+ L V
Sbjct: 58  PMELFAKGRAPARLTRLRDKYVQLSKLEISRLLCVNFNQYFASLSAEAFIKDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L++ GEKYGF  V       N+ + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAAND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + ++A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +     D    
Sbjct: 177 LASSATMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALDIDGVPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE   FDF   +YG++  V     LR EIKF+  + LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFESFDALKNQI 295

Query: 299 GEDEKKARKIL 309
             D + AR  L
Sbjct: 296 ELDAEAARVWL 306


>gi|156935454|ref|YP_001439370.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156533708|gb|ABU78534.1| hypothetical protein ESA_03313 [Cronobacter sakazakii ATCC BAA-894]
          Length = 312

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L +   G V+ IGNFDG+H GH  +L            P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLTSEHHGCVLTIGNFDGVHRGHQALLAGLCAQGRERGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ F+  +LVE L V
Sbjct: 58  PLELFAADKAPARLTRLREKLRYLARCGVDYVLCIRFDRRFAALTAQNFVSDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K + TG  FRFG  R GD  +LQK G +YGF           +   +SS+ +R AL +  
Sbjct: 118 KFLATGDDFRFGAGREGDFLLLQKAGREYGFEVTSTQTFCE-EGVRISSTAVRQALAQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  F I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LSLAENLLGRPFAISGRVVHGDALGRTIGFPTANLPLRRQVSPVKGVYAVEVLGISDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVAIDLYGRHIDVVLRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             D   AR       P
Sbjct: 296 ARDVITARDFFGLPTP 311


>gi|147675076|ref|YP_001216176.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           cholerae O395]
 gi|262169980|ref|ZP_06037670.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC27]
 gi|146316959|gb|ABQ21498.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O395]
 gi|227012506|gb|ACP08716.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O395]
 gi|262021714|gb|EEY40425.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae RC27]
          Length = 322

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+  GF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQLR-VSSTAIREALAADQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 177 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|293392922|ref|ZP_06637239.1| riboflavin biosynthesis protein RibF [Serratia odorifera DSM 4582]
 gi|291424456|gb|EFE97668.1| riboflavin biosynthesis protein RibF [Serratia odorifera DSM 4582]
          Length = 312

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 106/317 (33%), Positives = 159/317 (50%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHRGCVLTIGNFDGVHRGHKALLEQLEQEGKRLGLPVIVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFAADKAPARLTRLRDKAKYLAQAGVDTLLCVKFDPRFAANTAQAFIAELLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG +R GD  +LQK GE+YGF  V     R    + +SS+ IR AL    
Sbjct: 118 RFLMVGDDFRFGANRIGDFPLLQKAGEEYGFEVVSTPTFREGD-RRISSTAIRNALRDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LPLAEKLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPQPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGRHLDVVLRAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 296 ANDVVTARSFFGLKTPV 312


>gi|319406954|emb|CBI80591.1| riboflavin biosynthesis protein RibF [Bartonella sp. 1-1C]
          Length = 330

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 203/326 (62%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F  ++    +P   +G V+AIGNFDG+HLGH ++L++A+ +      P  VL+F PH
Sbjct: 1   MFDFLRLQECNLIPLAWRGAVLAIGNFDGVHLGHQVVLQKALDLSCEKKRPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  S+++FI  +L +  +V
Sbjct: 61  PKSFFQGSTSVDRLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSSDEFITVILKKTFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L +RGE+YGF  V I  L  ++ Q +SSS IR  L KG 
Sbjct: 121 SAVVTGENFRFGCQKSGNVRFLCQRGEEYGFEVVQIPCLYTSEKQTISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S+VI GEK+GR LGFPTAN  L     L  GVYA+RFR  + T Y
Sbjct: 181 VSQAAHLLGYHYRVRSNVIQGEKLGRRLGFPTANQLLPSQTGLAHGVYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+FGR PT++ NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGIASFGRRPTVISNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYGLEALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L +  PLS  D  + F
Sbjct: 301 QHDEKEAQAVLRTKQPLSLLDEALTF 326


>gi|153834673|ref|ZP_01987340.1| riboflavin biosynthesis protein RibF [Vibrio harveyi HY01]
 gi|148868925|gb|EDL67983.1| riboflavin biosynthesis protein RibF [Vibrio harveyi HY01]
          Length = 323

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 13  MELIRGI---HNIKSRHHGCVLTIGNFDGVHRGHQRVLQQVSEQAEKLSLPSVVMTFEPQ 69

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LV  L V
Sbjct: 70  PMELFARDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGV 129

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 130 KFLVIGDDFCFGKGRTGNFTMLQEAGEKYGFEVVSTQSFCLQQLR-VSSTAIRKALARDD 188

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 189 LHSAQEMLGRDYSIAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPV 248

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 249 GGVANIGQRPTVNGV-RQQLEIHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 307

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 308 ELDAEAARVWLRQ 320


>gi|253988035|ref|YP_003039391.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253779485|emb|CAQ82646.1| riboflavin biosynthesis protein [Photorhabdus asymbiotica]
          Length = 314

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GH  +L+           P+ V+ F P 
Sbjct: 1   MELIRGIR---NIRACHRGCVLTIGNFDGVHRGHQALLKHLKHEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       +    L+    + K L + G   L+  KF    A  + E F+ ++LV+ L V
Sbjct: 58  PLEFFAKGNAPARLTRLRDKAKYLAQCGVDYLLCVKFDRSFAANTPEAFVSRLLVQKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK R GD   LQ+ GEKY F     +   +     +SS+ IR AL    
Sbjct: 118 KFLAVGDDFRFGKARCGDFAFLQQAGEKYDFEVTNSESFCD-GGLRISSTAIRQALQNDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++G T+GFPTAN+ L   +   +GVY +          
Sbjct: 177 LVLAETLLGHPYSICGRVVHGKRLGSTIGFPTANLPLKRLVAPVQGVYVVEVYGLGDKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + D   ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVSGHGQ-QLEVHLIDTQLDLYGRYIDVVLRKKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILES 311
             D   AR+  + 
Sbjct: 296 ANDLVAAREFFKQ 308


>gi|15640700|ref|NP_230330.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121587778|ref|ZP_01677538.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 2740-80]
 gi|153818718|ref|ZP_01971385.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae NCTC
           8457]
 gi|153823934|ref|ZP_01976601.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|227080862|ref|YP_002809413.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae M66-2]
 gi|254851013|ref|ZP_05240363.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MO10]
 gi|255743860|ref|ZP_05417816.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholera CIRS 101]
 gi|262156079|ref|ZP_06029198.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|298500795|ref|ZP_07010598.1| riboflavin biosynthesis protein RibF [Vibrio cholerae MAK 757]
 gi|9655120|gb|AAF93846.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548005|gb|EAX58085.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae 2740-80]
 gi|126510740|gb|EAZ73334.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae NCTC
           8457]
 gi|126518545|gb|EAZ75768.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae B33]
 gi|227008750|gb|ACP04962.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae M66-2]
 gi|254846718|gb|EET25132.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MO10]
 gi|255738491|gb|EET93880.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholera CIRS 101]
 gi|262030115|gb|EEY48760.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|297540576|gb|EFH76634.1| riboflavin biosynthesis protein RibF [Vibrio cholerae MAK 757]
          Length = 322

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 106/318 (33%), Positives = 153/318 (48%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L Q ++ A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+G   L+   F    A   A  FI+ +LV  L V
Sbjct: 58  PLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +LQ+ G+   F  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKERQGNFALLQQAGQALDFEVVSTQSFCLQQLR-VSSTAIREALAADQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +       T  
Sbjct: 177 LSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FDF   +YG++  V+    LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTV-DGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D + AR  L      S
Sbjct: 296 ELDAEAARVWLRQLKGCS 313


>gi|271502099|ref|YP_003335125.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech586]
 gi|270345654|gb|ACZ78419.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech586]
          Length = 313

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 156/317 (49%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLQACHYGCVLTIGNFDGVHRGHQALLERLKQEGQARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+   F    A   A  FI  +LVE L V
Sbjct: 58  PLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVTFDAHFAANHASTFISSLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G +  F  +      +   + VSS+ +R AL + +
Sbjct: 118 KFLVVGDDFRFGAGREGDFLLLQKAGVEQNFDVISTQTFCS-SGKRVSSTAVREALAQDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG ++GRT+GFPTAN+ L   +    GVYA++     +   
Sbjct: 177 LTLAQELLGHPFSISGRVVHGNELGRTIGFPTANLPLKRQVSPVSGVYAVQVYGLGEAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVTGDKRQQLEVHLLDVTLDLYGRHIDVVMCKKLRSEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR+      P+
Sbjct: 297 ADDVVAAREFFGLKAPV 313


>gi|268592114|ref|ZP_06126335.1| riboflavin biosynthesis protein RibF [Providencia rettgeri DSM
           1131]
 gi|291312510|gb|EFE52963.1| riboflavin biosynthesis protein RibF [Providencia rettgeri DSM
           1131]
          Length = 312

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +   I   Q++     G V+ IGNFDG+H GH ++L+  +        P  V+ F P 
Sbjct: 1   MELIRGI---QNIRACHHGCVLTIGNFDGVHRGHQVLLQNLKLKGAQLGLPTVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L   G   L+  +F    A+ +  +F+  +LV  L V
Sbjct: 58  PLEFFIGDKAPARLTRLRDKVKYLADSGIDYLLCVEFNQHFASLTPAEFVSDLLVSKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ G ++GF     +   +     +SS+ IR A+ + +
Sbjct: 118 KYLAIGDDFRFGKNRMGDFAFLQQAGSEFGFEVADTESFCD-SGLRISSTAIRRAIQENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V+HG ++GRT+GFPTAN+ L   +    GVYA+          
Sbjct: 177 LELAESLLGHSYRISGRVVHGNQLGRTIGFPTANLPLKRLVTPVTGVYAVEVYGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D + ++YG+   V     LR E +F  +E LK  +
Sbjct: 237 PGVANIGTRPTVSGKGT-QLEVHLIDANMDLYGRHIDVVLRKKLRDEQRFASLEALKEQI 295

Query: 299 GEDEKKARKILES 311
             D   AR+ L +
Sbjct: 296 ANDVIAAREYLTA 308


>gi|49474573|ref|YP_032615.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           quintana str. Toulouse]
 gi|49240077|emb|CAF26514.1| Riboflavin biosynthesis protein ribf [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 131/317 (41%), Positives = 199/317 (62%), Gaps = 5/317 (1%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
           LP   +G V+A+GNFDG+H GH  +L++A+      N    VL+F PHPR+  QSS+P+ 
Sbjct: 2   LPLDWQGAVLALGNFDGVHCGHQKVLQKALDLARMKNKLALVLTFEPHPRSFFQSSAPVD 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+  + + +IL+ +GF+ +I   F    +  S ++FI  +L + L+V  V+ G  F+FG
Sbjct: 62  RLTEAAEKAEILKILGFNGVIEQPFYAHFSALSVDEFINVILKKALDVSVVVIGDNFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             ++G   +L +RGE+ GF  V I  +    + + +++SSS IR  L++  V  AAHLLG
Sbjct: 122 HQKSGTAHLLCQRGEECGFEVVKIPCVCSTQDQQKRMISSSFIRQLLSQAQVEKAAHLLG 181

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           Y + + S++I GEK+GR LGFPTAN  L P   L  GVYA+R R  +   + GVA+FG  
Sbjct: 182 YHYRVCSNIIQGEKLGRLLGFPTANQILPPQTSLAHGVYAVRLRRANGVLHDGVASFGCR 241

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT++ +G  LLE+++FDF+ ++YG+ CTVSF  +LR + KF  +E L   M  DEK A+ 
Sbjct: 242 PTVIKDGAPLLETYLFDFNDDLYGESCTVSFLQFLRGQEKFDGLEPLITQMQRDEKAAKA 301

Query: 308 ILESSYPLSERDRIICF 324
           IL +  PLS+ DR++ F
Sbjct: 302 ILMTVQPLSQLDRLLTF 318


>gi|89072553|ref|ZP_01159125.1| hypothetical protein SKA34_18549 [Photobacterium sp. SKA34]
 gi|89051657|gb|EAR57110.1| hypothetical protein SKA34_18549 [Photobacterium sp. SKA34]
          Length = 320

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 111/320 (34%), Positives = 159/320 (49%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q +  A+      TV++F P 
Sbjct: 1   MELIRGI---HNIQPQHHGCVLTIGNFDGVHLGHQALLRQVVAKAHAMQLSATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L+K+G   L+   F    A  SAE F++ +LV+ L V
Sbjct: 58  PLELFAGDKAPARLTRFRDKYLQLKKVGIDRLLCVNFNHHFATMSAEDFVECLLVKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG+ R GD  +L + G K+GF  V       ++ Q VSS+ IR AL K  
Sbjct: 118 KFLVIGDDFRFGQGRNGDFSMLVEAGRKHGFEVVSTQSFCVSE-QRVSSTAIRQALAKNE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+     D    
Sbjct: 177 LEQAEMMLGRPYSIRGRVSHGRKLGRTIGFPTANIPLKRRVTPVAGVYAVEVYGADSRPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG +  V     LR E KF+  + LK  +
Sbjct: 237 MGVANVGHRPTVKGV-RQQLEVHLFDFQADLYGHQLEVVLRHKLRDEKKFESFDALKRQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
             D + AR  L     +  R
Sbjct: 296 ERDAQAARVWLSERNNVQLR 315


>gi|163803543|ref|ZP_02197412.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio sp.
           AND4]
 gi|159172678|gb|EDP57531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio sp.
           AND4]
          Length = 311

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 105/313 (33%), Positives = 159/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKSRHHGCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   +     L+    +   L K+    L+   F    A+ +AE+FI+ +LV  L V
Sbjct: 58  PMELFARNKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRRFADLTAEEFIRDLLVGRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+K+GF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLQEAGKKHGFEVVSTQSFCLQQLR-VSSTAIRQALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++    +   +
Sbjct: 177 LDCAQEMLGRDYSIAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQVLGLEDKPF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGKRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLLKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|156973298|ref|YP_001444205.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           harveyi ATCC BAA-1116]
 gi|156524892|gb|ABU69978.1| hypothetical protein VIBHAR_00979 [Vibrio harveyi ATCC BAA-1116]
          Length = 311

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 156/313 (49%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKSRHHGCVLTIGNFDGVHRGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+ +AE+FI+ +LV  L V
Sbjct: 58  PMELFARDKAPARLTRLRDKFVQLSKLDIDRLLCVNFNRHFADLTAEEFIRDLLVGRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ GEKYGF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVIGDDFCFGKGRTGNFAMLQEAGEKYGFEVVSTQSFCLQQLR-VSSTAIRKALARDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LHFAQEMLGRDYSIAGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|311280994|ref|YP_003943225.1| riboflavin biosynthesis protein RibF [Enterobacter cloacae SCF1]
 gi|308750189|gb|ADO49941.1| riboflavin biosynthesis protein RibF [Enterobacter cloacae SCF1]
          Length = 312

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 152/316 (48%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L++          P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLGQAPHGCVLTIGNFDGVHRGHQALLQRLRAEGRERGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + L + G   ++  +F    A  +A+ FI ++LV+ L V
Sbjct: 58  PLELFAVDKAPARLTRLREKLRYLAESGVDYVLCVRFDRRFAALTAQAFIGELLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G ++ F               +SS+ +R AL    
Sbjct: 118 RYLAVGDDFRFGAGREGDFLLLQKAGAEFSFDVTSTQTFCE-GGLRISSTAVRQALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LGLAQTLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 296 ARDELTAREFFGLAKP 311


>gi|269103424|ref|ZP_06156121.1| riboflavin kinase/FMN adenylyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163322|gb|EEZ41818.1| riboflavin kinase/FMN adenylyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 320

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 114/320 (35%), Positives = 168/320 (52%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L+Q I  A+    P TV+ F P 
Sbjct: 1   MELIRGI---YNIRPRHHGCVLTIGNFDGVHLGHQAVLKQLIVKAHEMSLPATVMCFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   S     L+    +   L+ +G   L+   F    AN +AE+F++++LVE L V
Sbjct: 58  PLEMFAPSRAPARLTRFRDKYLQLKNVGVERLLCVNFNAHFANLTAEEFVRRLLVEQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGKDR G+  +L   G++YGF  V       +K Q VSS+ IR AL   +
Sbjct: 118 KFLVVGDDFRFGKDRVGNFDMLVAAGKQYGFEVVSTQSFCVSK-QRVSSTAIRQALASDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +++A  +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVYA+      +   
Sbjct: 177 LVDAETMLGRPYSINGRVSHGRKLGRTIGFPTANVPLKRRVSPVSGVYAVEVYGVGEKPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG++  V     LR E KF+  + LK  +
Sbjct: 237 PGVANIGHRPTVKGV-RQQLEVHLFDFHSDLYGRQIEVVLRHKLRDEQKFESFDALKAQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
             D + AR  L  +  +  R
Sbjct: 296 EHDAQSARLWLAEANNVQLR 315


>gi|283783804|ref|YP_003363669.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
 gi|282947258|emb|CBG86803.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
          Length = 312

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQSLQEEGRRRGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 58  PLELFATDKAPARLTRLREKLRYLAQCGVDYVLCVRFDRRFAALTAQTFISDLLVDRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 RFLAVGDDFRFGAGRTGDFLLLQKAGAEYGFAVTNTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANIPLRRQVSPVKGVYAVEVMGAGEQPM 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHVLDVVMDLYGRHIDVVLRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR     S P
Sbjct: 296 ARDELTARDFFGLSKP 311


>gi|319403938|emb|CBI77526.1| riboflavin biosynthesis protein RibF [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 330

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 139/326 (42%), Positives = 203/326 (62%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M  F  ++    LP   +G V+AIGNFDG+HLGH ++L++A+ ++     P  VL+F PH
Sbjct: 1   MFDFLRLQECNLLPLAWRGAVLAIGNFDGVHLGHQVVLQKALDLSREKKRPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  S+++FI  +L +  +V
Sbjct: 61  PKSFFQGSTSVDRLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSSDEFITVILKKTFDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L +RGE+YGF  V I  L   + Q +SSS IR  L KG 
Sbjct: 121 SAVVTGENFRFGCQKSGNIRFLCQRGEEYGFEVVQIPCLCTAEQQTISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAHLLGY + + S+VI GEK+GR LGFPTAN  L P   L  GVYA+RFR  + T Y
Sbjct: 181 VSQAAHLLGYHYRVRSNVIQGEKLGRRLGFPTANQLLLPQTGLAHGVYAVRFRRANGTLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+FG  PT+V NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF  +E L   M
Sbjct: 241 DGIASFGCRPTVVSNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYGLEALVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L +  PLS  D  + F
Sbjct: 301 QHDEKEAQAVLRTKQPLSLLDEALTF 326


>gi|157960910|ref|YP_001500944.1| riboflavin biosynthesis protein RibF [Shewanella pealeana ATCC
           700345]
 gi|157845910|gb|ABV86409.1| riboflavin biosynthesis protein RibF [Shewanella pealeana ATCC
           700345]
          Length = 311

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 171/314 (54%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V++IGNFDG+H GH  ++ + +K A     P  V++F P 
Sbjct: 1   MELIRGI---HNILPKHRGCVLSIGNFDGVHRGHAEVINRLVKKAEHLGLPAAVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q  S    LS    +  +L+++    L+   F  + ++YSAE FI+++LV+ L V
Sbjct: 58  PRELFQGESAPARLSLLRDKIVLLDELKIDRLLCVNFNNKFSSYSAEDFIEQLLVKALGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+K GEK+GF  V          + VSS+ IR  L KG+
Sbjct: 118 KYLVVGDDFCFGKQRQGNFDMLRKAGEKFGFAVVSTQSF-ILGDKRVSSTEIRKLLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HGEKIGRT+GFPTAN+ L   +    GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGKVAHGEKIGRTIGFPTANIALKRKVTPVRGVFAVKLYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  F  ++ LK  +
Sbjct: 237 EGVANVGFRPTVN-GQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
            +D  +A+ +L S 
Sbjct: 296 KDDANRAKALLGSD 309


>gi|323970818|gb|EGB66071.1| riboflavin biosynthesis protein RibF [Escherichia coli TA007]
          Length = 313

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPAKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|118590690|ref|ZP_01548091.1| hypothetical protein SIAM614_05968 [Stappia aggregata IAM 12614]
 gi|118436666|gb|EAV43306.1| hypothetical protein SIAM614_05968 [Stappia aggregata IAM 12614]
          Length = 332

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 185/315 (58%), Gaps = 4/315 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQ 64
           IE   + P  LKGG+VAIGNFDG+H GH  +L+ A+ + +    P+  +SF PHPRT+  
Sbjct: 12  IESLDAFPADLKGGIVAIGNFDGVHRGHRAVLDAALGLGHGTHHPVYAMSFEPHPRTVFN 71

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            S P+F L+PP  +  +L   G    +   FT   A   A  F+Q +L++ L +   +TG
Sbjct: 72  PSKPVFRLTPPQQKLDLLRLCGLDGALILPFTKAFAGIEANAFVQDILIDTLGISHAVTG 131

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+ R G    L+  G  +GF    + +  +  ++++SS+ IR +L++G +  A  
Sbjct: 132 YDFHFGRARQGTPDYLRSAGANHGFGVTIVQQQEDEGAEVISSTRIRESLSRGDIAQANG 191

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLGYR+  ++DV HG+K GR LG+PTANM LS    LK+G+YA++ R +  T + GVA++
Sbjct: 192 LLGYRWFFDADVRHGDKRGRDLGYPTANMSLSEACPLKQGIYAVKVRVEG-TWHDGVASY 250

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT   NG  L E F+FDF+ ++YG+   V    YLR E KF  +E L   M  D ++
Sbjct: 251 GRRPTF-DNGAALFEVFLFDFTGDLYGKTLRVHLVSYLRGEEKFDTVEALIAQMDRDSEE 309

Query: 305 ARKILESSYPLSERD 319
           AR  L S  PLSE D
Sbjct: 310 ARAALGSLQPLSELD 324


>gi|323497795|ref|ZP_08102809.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           sinaloensis DSM 21326]
 gi|323317142|gb|EGA70139.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           sinaloensis DSM 21326]
          Length = 314

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 160/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L Q  + A     P TV++F+P 
Sbjct: 1   MELIRGI---HNIQPHHTGCVLTIGNFDGVHLGHQAVLRQVSEKAKQLGLPSTVMTFDPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F  + AN SA++FI  +LV+ L V
Sbjct: 58  PLELFARDKAPARLTRLRDKFVQLSKLNIERLLCVNFNHQFANQSADEFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+K+GF  V        + + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGKGRRGNFAMLQEAGKKHGFDVVSTQSFCLQQLR-VSSTAIREALAQDK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++         
Sbjct: 177 LEQAAEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVQALGLGDEPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF   +YG++  +   D +R E KF+  + LK  +
Sbjct: 237 GGVANIGNRPTVNGV-RQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFDALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|283835085|ref|ZP_06354826.1| riboflavin biosynthesis protein RibF [Citrobacter youngae ATCC
           29220]
 gi|291069378|gb|EFE07487.1| riboflavin biosynthesis protein RibF [Citrobacter youngae ATCC
           29220]
          Length = 312

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 157/316 (49%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A+ +A+ FI  +LV+ L V
Sbjct: 58  PLELFATDKSPARLTRLREKLRYLAECGVDYVLCVRFDRRFASLTAQNFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQ+ G +YGF               +SS+ +R AL   +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQEAGAEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+         +
Sbjct: 177 LQLAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVVLRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 296 ARDELTAREFFGLTKP 311


>gi|260775153|ref|ZP_05884051.1| riboflavin kinase/FMN adenylyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608854|gb|EEX35016.1| riboflavin kinase/FMN adenylyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 311

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 154/313 (49%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L Q  + A     P TV++F P 
Sbjct: 1   MELIRGI---HNIKAHHSGCVLTIGNFDGVHLGHQAVLRQVSEQAAKLGLPATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    AN + ++FI  +LV+ L V
Sbjct: 58  PLELFAKEKAPARLTRLRDKFVQLSKLNIQRLLCVNFNKRFANQTPDEFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L++ GEK+GF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKGRKGNFKMLKEAGEKHGFEVVSTQSFCLEQLR-VSSTAIREALASDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +          
Sbjct: 177 LNSAAEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALGLGGKPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF   +YG++  +     LR E KF   E LK  +
Sbjct: 237 GGVANIGNRPTVNGV-RQQLEVHLFDFQANLYGKQLEIVLLHKLRDEHKFDSFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|237729319|ref|ZP_04559800.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           sp. 30_2]
 gi|226909048|gb|EEH94966.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           sp. 30_2]
          Length = 312

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 156/316 (49%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLREEGRKRNLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 58  PLELFATDKSPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQTFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQ+ G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQEAGAEYGFDITSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LQLAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVVLRKKIRSEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 296 ARDELTAREFFGLTKP 311


>gi|323492573|ref|ZP_08097719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           brasiliensis LMG 20546]
 gi|323313175|gb|EGA66293.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           brasiliensis LMG 20546]
          Length = 314

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 160/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  H +G V+ IGNFDG+HLGH  +L Q  + A     P TV++F+P 
Sbjct: 1   MELIRGI---HNIKPHHQGCVLTIGNFDGVHLGHQEVLRQVSEQAKELGLPSTVMTFDPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F  + AN + E FI  +LVE L V
Sbjct: 58  PLELFAKDKAPARLTRLRDKFVQLSKLNIERLLCVNFNHKFANQTPEAFISDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG++R G+  +LQ+ G+KYGF  V     R  K + VSS+ IR AL +  
Sbjct: 118 KFLVVGDDFCFGQNRKGNFAMLQEAGKKYGFEVVSTQSFRLAKLR-VSSTAIRQALAQDK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +          
Sbjct: 177 LDAAAEMLGRNYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVEALGLGDEPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF   +YG++  +   D +R E KF+  E LK  +
Sbjct: 237 GGVANIGNRPTVNGV-RQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|170680169|ref|YP_001742140.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli SMS-3-5]
 gi|170517887|gb|ACB16065.1| riboflavin biosynthesis protein RibF [Escherichia coli SMS-3-5]
 gi|323964879|gb|EGB60346.1| riboflavin biosynthesis protein RibF [Escherichia coli M863]
 gi|323975808|gb|EGB70904.1| riboflavin biosynthesis protein RibF [Escherichia coli TW10509]
 gi|327254998|gb|EGE66601.1| riboflavin biosynthesis protein RibF [Escherichia coli STEC_7v]
          Length = 313

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGAEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|320540431|ref|ZP_08040081.1| bifunctional riboflavin kinase/FAD synthetase [Serratia symbiotica
           str. Tucson]
 gi|320029362|gb|EFW11391.1| bifunctional riboflavin kinase/FAD synthetase [Serratia symbiotica
           str. Tucson]
          Length = 310

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 159/311 (51%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  +LEQ  +       P+ V+ F P 
Sbjct: 1   MQLIRGI---HNIQARHHGCVLTIGNFDGVHRGHQAVLEQLQQEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + K L + G   L+  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLEMFATDQAPARLTRLRDKAKYLAQAGVDYLLCVKFDPRFAANTAQAFIAELLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  FRFG  R GD  +LQ+ G++YGF  V     R    Q +SS+ IR AL  G 
Sbjct: 118 KLLIVGDDFRFGAGRQGDFTLLQQAGKEYGFEVVSTSTFRE-GGQRISSTAIRHALDDGA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LPLAENLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPDPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTLDGVCQ-QLEVHLLDVTMDLYGRHIDVVLRMKMRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKIL 309
            +D   ARK  
Sbjct: 296 ADDVVTARKFF 306


>gi|148978531|ref|ZP_01814983.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrionales
           bacterium SWAT-3]
 gi|145962320|gb|EDK27601.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrionales
           bacterium SWAT-3]
          Length = 311

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 111/311 (35%), Positives = 156/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q  + A     P  V++F P 
Sbjct: 1   MKLIRGI---HNIKAQHHGCVLTIGNFDGVHLGHQEVLSQVSEQAAALGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+  S L+   F    A+ SAE FI+ +LV+ L V
Sbjct: 58  PMELFARDRAPARLTRLRDKYVQLSKLDISRLLCVNFNQYFASLSAEAFIKDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+  GEKYGF  V       N+ + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLKDAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAVDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  +A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +     D    
Sbjct: 177 LAASATMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEALDIDGVPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE   FDF   +YG++  V     LR EIKF+  + LK  +
Sbjct: 237 GGVANIGQRPTVN-GARQQLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFESFDALKNQI 295

Query: 299 GEDEKKARKIL 309
             D + AR  L
Sbjct: 296 ELDAEAARVWL 306


>gi|331661389|ref|ZP_08362313.1| riboflavin biosynthesis protein RibF [Escherichia coli TA143]
 gi|331061304|gb|EGI33267.1| riboflavin biosynthesis protein RibF [Escherichia coli TA143]
          Length = 313

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR++   + P
Sbjct: 297 ARDELTARELFGLTKP 312


>gi|170725651|ref|YP_001759677.1| riboflavin biosynthesis protein RibF [Shewanella woodyi ATCC 51908]
 gi|169810998|gb|ACA85582.1| riboflavin biosynthesis protein RibF [Shewanella woodyi ATCC 51908]
          Length = 311

 Score =  355 bits (911), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 115/311 (36%), Positives = 167/311 (53%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I  N  LP H  G V+ IGNFDG+H GH  ++ + +K A   N P T+++F P 
Sbjct: 1   MELIRGI--NNILPAHH-GCVLTIGNFDGVHRGHAEVISKLVKKARQLNVPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  S    LS    +  +LE++G   L+   F  + A   AE FI K+LV+ L V
Sbjct: 58  PQEMFRGDSAPARLSTLRDKIVLLEELGIDRLVCINFNTKFAEMPAEDFIDKLLVKSLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK+R G+  +L+  GEK+ F  V          + VSS+ IR  L KG 
Sbjct: 118 KYLVVGDDFCFGKERMGNFDMLRTSGEKHQFAVVSTQSFLLGDKR-VSSTEIRGLLAKGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HGE+IGRT+GFPTAN+ L   +    GV+A++    D   Y
Sbjct: 177 MEQARRLLGHPFTLSGRVAHGEEIGRTIGFPTANIALKRKVSPVRGVFAVKLYWDDSDVY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  F+ +E L+  +
Sbjct: 237 DGVANVGFRPTVN-GQKCQLEVHLFDFDGDLYGRTVEVELVAKIRDEQPFQSLEALRKQI 295

Query: 299 GEDEKKARKIL 309
             D  KA+ +L
Sbjct: 296 NNDADKAKALL 306


>gi|290474753|ref|YP_003467633.1| bifunctional flavokinase/FAD synthetase [Xenorhabdus bovienii
           SS-2004]
 gi|289174066|emb|CBJ80853.1| bifunctional: flavokinase; FAD synthetase [Xenorhabdus bovienii
           SS-2004]
          Length = 314

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   +    ++     G V+ IGNFDG+H GH  +L+   +  + +  P  V+ F P 
Sbjct: 1   MELIRGV---HNIRARHHGCVLTIGNFDGVHRGHQALLKHLKQEGLRSGLPTMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + L + G   L+  KF    A  S E F+ ++LVE L V
Sbjct: 58  PLEVFAVDKAPARLTRLRDKIRYLSQYGVDYLLCVKFDRNFAANSPEAFVSRLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK+R GD   LQ+ G++Y F     D   +     +SS+ IR AL    
Sbjct: 118 KFLAIGDDFRFGKNRLGDFHYLQQAGKQYCFDVASTDSFCD-SGLRISSTAIRQALQDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAETLLGHPYSISGRVVHGKRLGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D   ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGNRPTVAGLGQ-QLEVHLIDTQMDLYGRHIDVVLRKKLRDEQRFASLDALKQQI 295

Query: 299 GEDEKKARKIL 309
             D   AR  L
Sbjct: 296 ANDVVAARDCL 306


>gi|322834474|ref|YP_004214501.1| riboflavin biosynthesis protein RibF [Rahnella sp. Y9602]
 gi|321169675|gb|ADW75374.1| riboflavin biosynthesis protein RibF [Rahnella sp. Y9602]
          Length = 312

 Score =  354 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 106/311 (34%), Positives = 156/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+H GH  ++EQ          P+ V+ F P 
Sbjct: 1   MELIRGI---HNIRARHHGCVLTIGNFDGVHRGHQALIEQLKLEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L + G   L+  +F    A + A+ FI ++LVE L V
Sbjct: 58  PLELFAGDKAPARLTSLRDKAKYLAECGVDYLLCVRFEPRFAAHMAQAFISQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK GE+YGF  +     R  +++ +SS+ IR AL    
Sbjct: 118 KFLTVGDDFRFGASRLGDFELLQKAGEEYGFEVISTQTFREGENR-ISSTAIRNALRDDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG+ F+I   V+HG+K+GRT+GFPTAN+ L   +    GVYA+          
Sbjct: 177 LALAENLLGHPFSISGRVVHGDKLGRTIGFPTANVPLKRVVSPVRGVYAVEVLGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGIRPTVGGVRK-QLEVHLLDTTLDLYGRHIDVVLRAKLRNEQRFSSLDALKQQI 295

Query: 299 GEDEKKARKIL 309
             DE  AR+  
Sbjct: 296 ANDEVTAREFF 306


>gi|15799707|ref|NP_285719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 EDL933]
 gi|15829282|ref|NP_308055.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. Sakai]
 gi|16128019|ref|NP_414566.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           str. K-12 substr. MG1655]
 gi|24111470|ref|NP_705980.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2a str. 301]
 gi|26245946|ref|NP_751985.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli CFT073]
 gi|30061593|ref|NP_835764.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2a str. 2457T]
 gi|74310643|ref|YP_309062.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           sonnei Ss046]
 gi|89106909|ref|AP_000689.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. W3110]
 gi|91209082|ref|YP_539068.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UTI89]
 gi|110640236|ref|YP_667964.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 536]
 gi|110804092|ref|YP_687612.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 5 str. 8401]
 gi|117622314|ref|YP_851227.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli APEC O1]
 gi|157156528|ref|YP_001461193.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli E24377A]
 gi|157159492|ref|YP_001456810.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli HS]
 gi|168756849|ref|ZP_02781856.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762786|ref|ZP_02787793.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766713|ref|ZP_02791720.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776941|ref|ZP_02801948.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781722|ref|ZP_02806729.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785076|ref|ZP_02810083.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC869]
 gi|170079688|ref|YP_001729008.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|187730272|ref|YP_001878849.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii CDC 3083-94]
 gi|191168890|ref|ZP_03030661.1| riboflavin biosynthesis protein RibF [Escherichia coli B7A]
 gi|191174126|ref|ZP_03035640.1| riboflavin biosynthesis protein RibF [Escherichia coli F11]
 gi|193066222|ref|ZP_03047275.1| riboflavin biosynthesis protein RibF [Escherichia coli E22]
 gi|193070963|ref|ZP_03051892.1| riboflavin biosynthesis protein RibF [Escherichia coli E110019]
 gi|194434566|ref|ZP_03066824.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1012]
 gi|195937698|ref|ZP_03083080.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. EC4024]
 gi|208805836|ref|ZP_03248173.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4206]
 gi|208811843|ref|ZP_03253172.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821743|ref|ZP_03262063.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396939|ref|YP_002268631.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917214|ref|YP_002291298.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli SE11]
 gi|217326317|ref|ZP_03442401.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           TW14588]
 gi|218547458|ref|YP_002381249.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           fergusonii ATCC 35469]
 gi|218552609|ref|YP_002385522.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli IAI1]
 gi|218556962|ref|YP_002389875.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli S88]
 gi|218687899|ref|YP_002396111.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli ED1a]
 gi|218693496|ref|YP_002401163.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 55989]
 gi|218698445|ref|YP_002406074.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli IAI39]
 gi|218703285|ref|YP_002410804.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UMN026]
 gi|227885081|ref|ZP_04002886.1| FAD synthetase [Escherichia coli 83972]
 gi|237704164|ref|ZP_04534645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|238899430|ref|YP_002925226.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           BW2952]
 gi|254037440|ref|ZP_04871517.1| riboflavin biosynthesis protein RibF [Escherichia sp. 1_1_43]
 gi|254791160|ref|YP_003075997.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|260842262|ref|YP_003220040.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O103:H2 str. 12009]
 gi|260866175|ref|YP_003232577.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O111:H- str. 11128]
 gi|261226783|ref|ZP_05941064.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255186|ref|ZP_05947719.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291280848|ref|YP_003497666.1| riboflavin biosynthesis protein RibF [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403098|ref|ZP_06647195.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli FVEC1412]
 gi|293408116|ref|ZP_06651956.1| riboflavin biosynthesis protein RibF [Escherichia coli B354]
 gi|293476687|ref|ZP_06665095.1| riboflavin biosynthesis protein RibF [Escherichia coli B088]
 gi|298378625|ref|ZP_06988509.1| riboflavin biosynthesis protein ribF [Escherichia coli FVEC1302]
 gi|300816057|ref|ZP_07096280.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 107-1]
 gi|300821973|ref|ZP_07102117.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 119-7]
 gi|300896788|ref|ZP_07115292.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 198-1]
 gi|300905425|ref|ZP_07123192.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 84-1]
 gi|300919574|ref|ZP_07136066.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 115-1]
 gi|300924029|ref|ZP_07140029.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 182-1]
 gi|300939435|ref|ZP_07154097.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 21-1]
 gi|300980954|ref|ZP_07175268.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 45-1]
 gi|300984126|ref|ZP_07176877.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 200-1]
 gi|301019793|ref|ZP_07183937.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 69-1]
 gi|301048403|ref|ZP_07195430.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 185-1]
 gi|301303539|ref|ZP_07209662.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 124-1]
 gi|301330212|ref|ZP_07222872.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 78-1]
 gi|301648411|ref|ZP_07248147.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 146-1]
 gi|306815378|ref|ZP_07449527.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli NC101]
 gi|307136627|ref|ZP_07495983.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli H736]
 gi|307311522|ref|ZP_07591164.1| riboflavin biosynthesis protein RibF [Escherichia coli W]
 gi|309797790|ref|ZP_07692174.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 145-7]
 gi|312970117|ref|ZP_07784299.1| riboflavin biosynthesis protein RibF [Escherichia coli 1827-70]
 gi|331640472|ref|ZP_08341620.1| riboflavin biosynthesis protein RibF [Escherichia coli H736]
 gi|331650914|ref|ZP_08351942.1| riboflavin biosynthesis protein RibF [Escherichia coli M718]
 gi|331661060|ref|ZP_08361992.1| riboflavin biosynthesis protein RibF [Escherichia coli TA206]
 gi|331666257|ref|ZP_08367138.1| riboflavin biosynthesis protein RibF [Escherichia coli TA271]
 gi|331671543|ref|ZP_08372341.1| riboflavin biosynthesis protein RibF [Escherichia coli TA280]
 gi|331680593|ref|ZP_08381252.1| riboflavin biosynthesis protein RibF [Escherichia coli H591]
 gi|331681406|ref|ZP_08382043.1| riboflavin biosynthesis protein RibF [Escherichia coli H299]
 gi|84027894|sp|P0AG42|RIBF_ECO57 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027895|sp|P0AG41|RIBF_ECOL6 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027896|sp|P0AG40|RIBF_ECOLI RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|84027897|sp|P0AG43|RIBF_SHIFL RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|12512708|gb|AAG54327.1|AE005179_4 putative regulator [Escherichia coli O157:H7 str. EDL933]
 gi|26106343|gb|AAN78529.1|AE016755_29 Riboflavin biosynthesis protein ribF [Escherichia coli CFT073]
 gi|1786208|gb|AAC73136.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13359484|dbj|BAB33451.1| putative regulator [Escherichia coli O157:H7 str. Sakai]
 gi|24050220|gb|AAN41687.1| putative regulator [Shigella flexneri 2a str. 301]
 gi|30039835|gb|AAP15569.1| putative regulator [Shigella flexneri 2a str. 2457T]
 gi|73854120|gb|AAZ86827.1| putative regulator [Shigella sonnei Ss046]
 gi|85674289|dbj|BAB96594.2| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K12 substr. W3110]
 gi|91070656|gb|ABE05537.1| riboflavin biosynthesis protein RibF; riboflavin kinase
           (flavokinase) [Escherichia coli UTI89]
 gi|110341828|gb|ABG68065.1| riboflavin kinase [Escherichia coli 536]
 gi|110613640|gb|ABF02307.1| putative regulator [Shigella flexneri 5 str. 8401]
 gi|115511438|gb|ABI99512.1| putative regulator [Escherichia coli APEC O1]
 gi|157065172|gb|ABV04427.1| riboflavin biosynthesis protein RibF [Escherichia coli HS]
 gi|157078558|gb|ABV18266.1| riboflavin biosynthesis protein RibF [Escherichia coli E24377A]
 gi|169887523|gb|ACB01230.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|187427264|gb|ACD06538.1| riboflavin biosynthesis protein RibF [Shigella boydii CDC 3083-94]
 gi|187767716|gb|EDU31560.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4196]
 gi|189000749|gb|EDU69735.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356106|gb|EDU74525.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364126|gb|EDU82545.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366968|gb|EDU85384.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374979|gb|EDU93395.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC869]
 gi|190901056|gb|EDV60834.1| riboflavin biosynthesis protein RibF [Escherichia coli B7A]
 gi|190905620|gb|EDV65245.1| riboflavin biosynthesis protein RibF [Escherichia coli F11]
 gi|192926147|gb|EDV80788.1| riboflavin biosynthesis protein RibF [Escherichia coli E22]
 gi|192955693|gb|EDV86167.1| riboflavin biosynthesis protein RibF [Escherichia coli E110019]
 gi|194417219|gb|EDX33330.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1012]
 gi|208725637|gb|EDZ75238.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733120|gb|EDZ81807.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741866|gb|EDZ89548.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158339|gb|ACI35772.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747124|gb|ACI71869.1| putative regulator [Escherichia coli]
 gi|209747126|gb|ACI71870.1| putative regulator [Escherichia coli]
 gi|209747128|gb|ACI71871.1| putative regulator [Escherichia coli]
 gi|209747130|gb|ACI71872.1| putative regulator [Escherichia coli]
 gi|209747132|gb|ACI71873.1| putative regulator [Escherichia coli]
 gi|209910473|dbj|BAG75547.1| flavokinase and FAD synthase [Escherichia coli SE11]
 gi|217322538|gb|EEC30962.1| riboflavin biosynthesis protein RibF [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350228|emb|CAU95911.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           55989]
 gi|218354999|emb|CAQ87605.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia
           fergusonii ATCC 35469]
 gi|218359377|emb|CAQ96916.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           IAI1]
 gi|218363731|emb|CAR01391.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           S88]
 gi|218368431|emb|CAR16167.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           IAI39]
 gi|218425463|emb|CAR06245.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           ED1a]
 gi|218430382|emb|CAR11249.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           UMN026]
 gi|222031856|emb|CAP74594.1| riboflavin biosynthesis protein ribF [Escherichia coli LF82]
 gi|226840546|gb|EEH72548.1| riboflavin biosynthesis protein RibF [Escherichia sp. 1_1_43]
 gi|226902076|gb|EEH88335.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|227837910|gb|EEJ48376.1| FAD synthetase [Escherichia coli 83972]
 gi|238860084|gb|ACR62082.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           BW2952]
 gi|254590560|gb|ACT69921.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O157:H7 str. TW14359]
 gi|257757409|dbj|BAI28906.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O103:H2 str. 12009]
 gi|257762531|dbj|BAI34026.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O111:H- str. 11128]
 gi|260450766|gb|ACX41188.1| riboflavin biosynthesis protein RibF [Escherichia coli DH1]
 gi|281177236|dbj|BAI53566.1| flavokinase and FAD synthetase [Escherichia coli SE15]
 gi|281599386|gb|ADA72370.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri 2002017]
 gi|284919806|emb|CBG32861.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Escherichia coli 042]
 gi|290760721|gb|ADD54682.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase)] [Escherichia coli O55:H7 str. CB9615]
 gi|291321140|gb|EFE60582.1| riboflavin biosynthesis protein RibF [Escherichia coli B088]
 gi|291430013|gb|EFF03027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli FVEC1412]
 gi|291472367|gb|EFF14849.1| riboflavin biosynthesis protein RibF [Escherichia coli B354]
 gi|294493301|gb|ADE92057.1| riboflavin biosynthesis protein RibF [Escherichia coli IHE3034]
 gi|298280959|gb|EFI22460.1| riboflavin biosynthesis protein ribF [Escherichia coli FVEC1302]
 gi|300299696|gb|EFJ56081.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 185-1]
 gi|300306751|gb|EFJ61271.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 200-1]
 gi|300359378|gb|EFJ75248.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 198-1]
 gi|300399080|gb|EFJ82618.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 69-1]
 gi|300402703|gb|EFJ86241.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 84-1]
 gi|300409111|gb|EFJ92649.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 45-1]
 gi|300413320|gb|EFJ96630.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 115-1]
 gi|300419753|gb|EFK03064.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 182-1]
 gi|300455656|gb|EFK19149.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 21-1]
 gi|300525573|gb|EFK46642.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 119-7]
 gi|300531264|gb|EFK52326.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 107-1]
 gi|300841266|gb|EFK69026.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 124-1]
 gi|300843774|gb|EFK71534.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 78-1]
 gi|301073546|gb|EFK88352.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 146-1]
 gi|305851040|gb|EFM51495.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli NC101]
 gi|306908501|gb|EFN38999.1| riboflavin biosynthesis protein RibF [Escherichia coli W]
 gi|307551866|gb|ADN44641.1| riboflavin biosynthesis protein RibF [Escherichia coli ABU 83972]
 gi|307629596|gb|ADN73900.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli UM146]
 gi|308118619|gb|EFO55881.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 145-7]
 gi|310337615|gb|EFQ02726.1| riboflavin biosynthesis protein RibF [Escherichia coli 1827-70]
 gi|312944628|gb|ADR25455.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|313646600|gb|EFS11061.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2a str.
           2457T]
 gi|315059250|gb|ADT73577.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli W]
 gi|315134719|dbj|BAJ41878.1| bifunctional riboflavin kinase -!- FAD synthetase [Escherichia coli
           DH1]
 gi|315255703|gb|EFU35671.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 85-1]
 gi|315285015|gb|EFU44460.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 110-3]
 gi|315293406|gb|EFU52758.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 153-1]
 gi|315298461|gb|EFU57716.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 16-3]
 gi|315616200|gb|EFU96819.1| riboflavin biosynthesis protein RibF [Escherichia coli 3431]
 gi|320173363|gb|EFW48565.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           dysenteriae CDC 74-1112]
 gi|320642065|gb|EFX11416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. G5101]
 gi|320647428|gb|EFX16223.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H- str. 493-89]
 gi|320652762|gb|EFX21000.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H- str. H 2687]
 gi|320658151|gb|EFX25880.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320663460|gb|EFX30744.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320668772|gb|EFX35567.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323176330|gb|EFZ61922.1| riboflavin biosynthesis protein RibF [Escherichia coli 1180]
 gi|323181719|gb|EFZ67132.1| riboflavin biosynthesis protein RibF [Escherichia coli 1357]
 gi|323380193|gb|ADX52461.1| riboflavin biosynthesis protein RibF [Escherichia coli KO11]
 gi|323935076|gb|EGB31443.1| riboflavin biosynthesis protein RibF [Escherichia coli E1520]
 gi|323939756|gb|EGB35958.1| riboflavin biosynthesis protein RibF [Escherichia coli E482]
 gi|323945762|gb|EGB41809.1| riboflavin biosynthesis protein RibF [Escherichia coli H120]
 gi|323950487|gb|EGB46365.1| riboflavin biosynthesis protein RibF [Escherichia coli H252]
 gi|323955219|gb|EGB50992.1| riboflavin biosynthesis protein RibF [Escherichia coli H263]
 gi|324008366|gb|EGB77585.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 57-2]
 gi|324012344|gb|EGB81563.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 60-1]
 gi|324017710|gb|EGB86929.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 117-3]
 gi|324118376|gb|EGC12270.1| riboflavin biosynthesis protein RibF [Escherichia coli E1167]
 gi|325495942|gb|EGC93801.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           fergusonii ECD227]
 gi|326346888|gb|EGD70622.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. 1044]
 gi|331040218|gb|EGI12425.1| riboflavin biosynthesis protein RibF [Escherichia coli H736]
 gi|331051368|gb|EGI23417.1| riboflavin biosynthesis protein RibF [Escherichia coli M718]
 gi|331052102|gb|EGI24141.1| riboflavin biosynthesis protein RibF [Escherichia coli TA206]
 gi|331066468|gb|EGI38345.1| riboflavin biosynthesis protein RibF [Escherichia coli TA271]
 gi|331071388|gb|EGI42745.1| riboflavin biosynthesis protein RibF [Escherichia coli TA280]
 gi|331072056|gb|EGI43392.1| riboflavin biosynthesis protein RibF [Escherichia coli H591]
 gi|331081627|gb|EGI52788.1| riboflavin biosynthesis protein RibF [Escherichia coli H299]
 gi|332762584|gb|EGJ92849.1| riboflavin biosynthesis protein RibF [Shigella flexneri 4343-70]
 gi|332768812|gb|EGJ98991.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2930-71]
          Length = 313

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|294139772|ref|YP_003555750.1| riboflavin biosynthesis protein RibF [Shewanella violacea DSS12]
 gi|293326241|dbj|BAJ00972.1| riboflavin biosynthesis protein RibF [Shewanella violacea DSS12]
          Length = 311

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        ++     G V+ IGNFDG+H GH  ++ + +K A   N P T+++F P 
Sbjct: 1   MELIRG---THNILPAHHGCVLTIGNFDGVHRGHAEVIAKLVKKARQLNVPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    S    LS    +  +LE++G   L+   F  + A+ SA+ FI K+LVE L V
Sbjct: 58  PQEMFSGDSAPARLSTLRDKIILLEELGIDRLVCINFNAKFADLSAQDFIDKLLVESLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+  GEK+ F  V          + VSS+ IR  L KG+
Sbjct: 118 KYLVIGDDFCFGKQRKGNFEMLKLAGEKHQFAVVSTQSFVLGDKR-VSSTEIRNQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    D   Y
Sbjct: 177 LEQARRLLGHPFTLCGKVAHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKMYWDDSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  FK ++ LK  +
Sbjct: 237 DGVANVGFRPTVN-GQVCQLEVHLFDFDDDLYGRTVEVELVAKIRDEQPFKSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  KA+ +L + 
Sbjct: 296 NNDADKAKALLGND 309


>gi|170021616|ref|YP_001726570.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli ATCC 8739]
 gi|188495589|ref|ZP_03002859.1| riboflavin biosynthesis protein RibF [Escherichia coli 53638]
 gi|253774943|ref|YP_003037774.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160151|ref|YP_003043259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli B str. REL606]
 gi|297517215|ref|ZP_06935601.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli OP50]
 gi|300928680|ref|ZP_07144199.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 187-1]
 gi|169756544|gb|ACA79243.1| riboflavin biosynthesis protein RibF [Escherichia coli ATCC 8739]
 gi|188490788|gb|EDU65891.1| riboflavin biosynthesis protein RibF [Escherichia coli 53638]
 gi|242375865|emb|CAQ30545.1| bifunctional riboflavin kinase / FMN adenylyltransferase
           [Escherichia coli BL21(DE3)]
 gi|253325987|gb|ACT30589.1| riboflavin biosynthesis protein RibF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972052|gb|ACT37723.1| putative regulator [Escherichia coli B str. REL606]
 gi|253976261|gb|ACT41931.1| putative regulator [Escherichia coli BL21(DE3)]
 gi|300463349|gb|EFK26842.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 187-1]
 gi|323959972|gb|EGB55618.1| riboflavin biosynthesis protein RibF [Escherichia coli H489]
          Length = 313

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|82775427|ref|YP_401774.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           dysenteriae Sd197]
 gi|81239575|gb|ABB60285.1| putative regulator [Shigella dysenteriae Sd197]
          Length = 313

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++   F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVHFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R G+  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGNFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|16759039|ref|NP_454656.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16763435|ref|NP_459050.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29140589|ref|NP_803931.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62178609|ref|YP_215026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|167550783|ref|ZP_02344540.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167989898|ref|ZP_02570998.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230303|ref|ZP_02655361.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168234788|ref|ZP_02659846.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168262290|ref|ZP_02684263.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464424|ref|ZP_02698327.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820988|ref|ZP_02832988.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194442807|ref|YP_002039275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194469211|ref|ZP_03075195.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734968|ref|YP_002113056.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197248853|ref|YP_002145026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262735|ref|ZP_03162809.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200386646|ref|ZP_03213258.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927078|ref|ZP_03218280.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|207855561|ref|YP_002242212.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213163430|ref|ZP_03349140.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213852259|ref|ZP_03381791.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|224581882|ref|YP_002635680.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238910799|ref|ZP_04654636.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|289826108|ref|ZP_06545220.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25302150|pir||AH0507 FMN adenylyltransferase (EC 2.7.7.2) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418540|gb|AAL19009.1| flavokinase and FAD synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501329|emb|CAD01200.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136213|gb|AAO67780.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126242|gb|AAX63945.1| flavokinase and FAD synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194401470|gb|ACF61692.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194455575|gb|EDX44414.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194710470|gb|ACF89691.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632986|gb|EDX51440.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197212556|gb|ACH49953.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240990|gb|EDY23610.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197292041|gb|EDY31391.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199603744|gb|EDZ02289.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323743|gb|EDZ08938.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324347|gb|EDZ12186.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205331395|gb|EDZ18159.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205335177|gb|EDZ21941.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205342427|gb|EDZ29191.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348861|gb|EDZ35492.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707364|emb|CAR31636.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466409|gb|ACN44239.1| hypothetical protein SPC_0047 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245279|emb|CBG23064.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267991706|gb|ACY86591.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301156677|emb|CBW16147.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911015|dbj|BAJ34989.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|322615803|gb|EFY12723.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322620651|gb|EFY17511.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322621720|gb|EFY18570.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322627446|gb|EFY24237.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322630752|gb|EFY27516.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638028|gb|EFY34729.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641317|gb|EFY37957.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647652|gb|EFY44137.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651488|gb|EFY47865.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656559|gb|EFY52847.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658782|gb|EFY55039.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322661775|gb|EFY57991.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666478|gb|EFY62656.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322672363|gb|EFY68475.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322676325|gb|EFY72396.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322679582|gb|EFY75627.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684293|gb|EFY80297.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322713060|gb|EFZ04631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323128363|gb|ADX15793.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323191776|gb|EFZ77025.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198955|gb|EFZ84053.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323201021|gb|EFZ86090.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323209418|gb|EFZ94351.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212893|gb|EFZ97695.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323216637|gb|EGA01362.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323219865|gb|EGA04344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323226069|gb|EGA10286.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323228722|gb|EGA12851.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323236664|gb|EGA20740.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323239835|gb|EGA23882.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323242117|gb|EGA26146.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323247442|gb|EGA31397.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323250543|gb|EGA34425.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259273|gb|EGA42915.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263848|gb|EGA47369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323265556|gb|EGA49052.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270002|gb|EGA53450.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326626408|gb|EGE32751.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
 gi|332986997|gb|AEF05980.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 312

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  ARK  
Sbjct: 296 ARDELTARKFF 306


>gi|320089077|emb|CBY98833.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 312

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLALRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  ARK  
Sbjct: 296 ARDELTARKFF 306


>gi|256020135|ref|ZP_05434000.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           sp. D9]
 gi|332281290|ref|ZP_08393703.1| bifunctional riboflavin kinase/FAD synthetase [Shigella sp. D9]
 gi|332103642|gb|EGJ06988.1| bifunctional riboflavin kinase/FAD synthetase [Shigella sp. D9]
          Length = 313

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAGSLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|291616221|ref|YP_003518963.1| RibF [Pantoea ananatis LMG 20103]
 gi|291151251|gb|ADD75835.1| RibF [Pantoea ananatis LMG 20103]
          Length = 308

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L     G V+ IGNFDG+H GH  ++ + ++     N P+ V+ F P 
Sbjct: 1   MKFIRGI---HNLNAQHHGCVLTIGNFDGVHRGHQALMGRLLEEGRKRNLPVMVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    S    L+    + K L ++G  +++  +F    A  SA+ FI ++LV  L V
Sbjct: 58  PLELFAGESAPARLTRLREKLKYLAEIGVDSVLCVRFDHRFAALSAQSFISELLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFG  R GD  +LQK G +YGF  V  +   +   + +SS+ +R AL + +
Sbjct: 118 NYLAVGDDFRFGAGRQGDFLLLQKAGAQYGFDVVSTETFCD-GGKRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG+ +GRTLGFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAQSLLGHPFSISGRVVHGDALGRTLGFPTANLPLRRCVSPVKGVYAVEVHGLGPQPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTV-KGLRQQLEVHLLDINMDLYGRHIDVVLKQKIRNEQRFASLDALKEQI 295

Query: 299 GEDEKKARKIL 309
            +D   AR+  
Sbjct: 296 AKDTVTARQFF 306


>gi|83594295|ref|YP_428047.1| FMN adenylyltransferase / riboflavin kinase [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577209|gb|ABC23760.1| FMN adenylyltransferase / riboflavin kinase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 317

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 168/314 (53%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL--EQAIKIANNSPITVLSFNPH 58
           M +  +      LP  L GG +A+GNFDG+H GH  ++   +AI      P+ V++F PH
Sbjct: 1   MRILRH---PYELPASLLGGSLALGNFDGVHRGHQRVIGSARAIAAQQGLPLGVMTFAPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q   P FTL+   ++  ++ + G   L    F    +  SAE F+ +VLV+ L V
Sbjct: 58  PRRFFQPDLPPFTLTSFRLKAHLISEEGADFLYVQAFDEALSKGSAEWFVTEVLVKGLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  + FG  R G   +LQK     GF    +  +++    I SS+ +R  L +G 
Sbjct: 118 AHVVVGQDYAFGHRRQGTVSLLQKMALDLGFGVTAVAPVKDEGGAIYSSTRVRACLQEGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
           V  AA +LG+ + +E  V HG+K GRT+GFPTAN++L      + GVYA+     D    
Sbjct: 178 VTTAAQILGHPWEVEGRVEHGDKRGRTIGFPTANLKLGDYQRPRAGVYAVTAGLDDGAQT 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVANFGR PT   NG  LLE  +FD S ++YG+   V F D+LRPE  F  +E LK
Sbjct: 238 RFRPGVANFGRRPTF-DNGDALLEVHLFDVSPDLYGRHLRVRFHDFLRPEQTFPGLEALK 296

Query: 296 IYMGEDEKKARKIL 309
             +G+D  +AR + 
Sbjct: 297 AQIGQDAAQARALF 310


>gi|37678870|ref|NP_933479.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           vulnificus YJ016]
 gi|37197611|dbj|BAC93450.1| FAD synthase [Vibrio vulnificus YJ016]
          Length = 326

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+HLGH  +L Q    A     P  V++F P 
Sbjct: 16  MELIRGI---HNIKPQHRGCVLTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQ 72

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+  A+ FI+ +LVE L V
Sbjct: 73  PLELFAKEKAPARLTRLRDKFVQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+KYGF  V        + + VSS+ IR AL    
Sbjct: 133 KFLVVGDDFCFGKARQGNFAMLQEAGKKYGFTVVNTQSFCLAQLR-VSSTAIREALAHDQ 191

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++    D    
Sbjct: 192 LAVAAQMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKPI 251

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  + LK  +
Sbjct: 252 GGVANIGQRPTVNGV-RQQLEVHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQQI 310

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 311 ELDAEAARVWLRQ 323


>gi|309700238|emb|CBI99526.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Escherichia coli ETEC H10407]
          Length = 313

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R ALT  +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALTDDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|168243564|ref|ZP_02668496.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194448015|ref|YP_002044011.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194406319|gb|ACF66538.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205337533|gb|EDZ24297.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 312

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFATDKAPARLTRLREKLYYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  ARK  
Sbjct: 296 ARDELTARKFF 306


>gi|119774060|ref|YP_926800.1| riboflavin biosynthesis protein RibF [Shewanella amazonensis SB2B]
 gi|119766560|gb|ABL99130.1| riboflavin kinase / FMN adenylyltransferase [Shewanella amazonensis
           SB2B]
          Length = 311

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 168/311 (54%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GH  ++   ++ A     P T+++F P 
Sbjct: 1   MELIRGI---HNILPAHRGCVLTIGNFDGVHRGHAKVIASLVERAKHFGLPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +       LS    +  +L+++G   L+   F  + A+   E FI+ +LV+ L V
Sbjct: 58  PQELFRGDDAPARLSLLRDKIVLLDELGIDRLLCVNFNRKFASMDPEHFIEDLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK RAG+  +L+K GE++GF  V          + VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGKSRAGNFDMLKKAGERFGFAVVNTHSFMVGDLR-VSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L   ++   GV+A++    D   Y
Sbjct: 177 LEQARRLLGHPFTLCGRVAHGQKIGRTIGFPTANIALKRKVVPVRGVFAVKLWWDDSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+R  V     +R E  F+ ++ LK  +
Sbjct: 237 EGVANVGFRPTVN-GQVCQLEVHLFDFEGDLYGKRVEVELVAKIRDEQPFESLDALKKQI 295

Query: 299 GEDEKKARKIL 309
             D  +AR +L
Sbjct: 296 WNDADRARALL 306


>gi|27363972|ref|NP_759500.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           vulnificus CMCP6]
 gi|27360089|gb|AAO09027.1| riboflavin biosynthesis protein RibF [Vibrio vulnificus CMCP6]
          Length = 311

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+HLGH  +L Q    A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKPQHRGCVLTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    A+  A+ FI+ +LVE L V
Sbjct: 58  PLELFAKEKAPARLTRLRDKFVQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+KYGF  V        + + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKARQGNFAMLQEAGKKYGFTVVNTQSFCLAQLR-VSSTAIREALAHDQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++    D    
Sbjct: 177 LAVAAQMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V     LR E KF+  + LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|146310247|ref|YP_001175321.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter sp. 638]
 gi|145317123|gb|ABP59270.1| FMN adenylyltransferase [Enterobacter sp. 638]
          Length = 312

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 152/316 (48%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHQALLQGLRKEGQARGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + L + G   ++  +F    A  +A+ F+  +LV+ L V
Sbjct: 58  PLELFAGDKAPARLTRLRDKLRYLAECGVDYVLCVRFDQRFAALTAQAFVGDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               VSS+ +R AL    
Sbjct: 118 QFLAVGDDFRFGAGRQGDFLLLQKAGLEYGFDVTSTMTFCE-GGVRVSSTAVRLALADDQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LDVAETLLGHPFSISGRVVHGDALGRTIGFPTANVPLRRQVSPVKGVYAVEVSGLCDTLL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    S P
Sbjct: 296 ARDELTAREYFGLSNP 311


>gi|261338977|ref|ZP_05966835.1| hypothetical protein ENTCAN_05181 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318807|gb|EFC57745.1| riboflavin biosynthesis protein RibF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 308

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I      P+   G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSKAPH---GCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + L + G   ++  +F    A  +A+ F+  +LV+ L V
Sbjct: 58  PLELFAGEKSPARLTRLREKLRYLAESGVDYVLCVRFDRRFAALTAQNFVSDLLVKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQ+ G +YGF               VSS+ +R AL    
Sbjct: 118 QFLAVGDDFRFGAGRQGDFLLLQRAGLEYGFDVTSAMTFCE-GGVRVSSTAVRQALANDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA+LLG+ FTI   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+         +
Sbjct: 177 LETAANLLGHPFTISGRVVHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVTGLGDKPF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 YGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  AR+  
Sbjct: 296 ARDELTAREFF 306


>gi|254503034|ref|ZP_05115185.1| riboflavin biosynthesis protein RibF [Labrenzia alexandrii DFL-11]
 gi|222439105|gb|EEE45784.1| riboflavin biosynthesis protein RibF [Labrenzia alexandrii DFL-11]
          Length = 332

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 125/318 (39%), Positives = 181/318 (56%), Gaps = 4/318 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRT 61
           F   E  +S P  LKGGVVAIGNFDG+H GH  +L+ A+ +      P+  +SF PHPRT
Sbjct: 9   FQIAESLESFPASLKGGVVAIGNFDGVHRGHRAVLDAALGLGRGTHHPVFAMSFEPHPRT 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   + P+F L+PP ++ ++L   G    +   FT + A   A  F+Q +L++ L +   
Sbjct: 69  VFNPAKPVFRLTPPPLKTEMLRVCGLDGALILPFTKDFAAVDANAFVQDILIDTLGISHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FG+ R G    L+  G ++GF    +    +  + ++SSS IR  L  G +  
Sbjct: 129 VTGYDFHFGRARQGTPDYLRAAGAQHGFGVTIVQREEDENADVISSSRIRDNLATGDMAE 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+  ES V HG+K GR LG+PTAN+++  D  L +G+YA++ +   +  Y GV
Sbjct: 189 ANALLGYRWFFESQVQHGDKRGRDLGYPTANLRMPEDCPLLQGIYAVKVKV-GENWYGGV 247

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR PT   NG  L E ++FDF  ++YG+   V    YLR E KF + E L   M  D
Sbjct: 248 ASYGRRPTF-DNGAALFEVYLFDFKGDLYGKTLRVHVVSYLRGEAKFDNAEALISQMDRD 306

Query: 302 EKKARKILESSYPLSERD 319
            ++AR  L S  PLSE D
Sbjct: 307 SEEARAALASLQPLSEID 324


>gi|157147567|ref|YP_001454886.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Citrobacter
           koseri ATCC BAA-895]
 gi|157084772|gb|ABV14450.1| hypothetical protein CKO_03367 [Citrobacter koseri ATCC BAA-895]
          Length = 312

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLREEGRKRGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 58  PLELFATEKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 RFLAVGDDFRFGAGREGDFLLLQKAGAEYGFDITNTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LPLAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPM 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKILESSYP 314
             DE  AR     S P
Sbjct: 296 ARDELTARDFFGLSKP 311


>gi|24375037|ref|NP_719080.1| riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1]
 gi|24349780|gb|AAN56524.1|AE015789_11 riboflavin biosynthesis protein RibF [Shewanella oneidensis MR-1]
          Length = 311

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 108/314 (34%), Positives = 167/314 (53%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L +
Sbjct: 58  PQELFRGENAPARLSLLRDKIVLLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R GD  +L++ G +YGF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGKGRKGDFDMLKQAGTRYGFTVVSTQSF-IVGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++   +D   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWEDSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + DF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQICQLEVHLLDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|215485186|ref|YP_002327617.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O127:H6 str. E2348/69]
 gi|312966144|ref|ZP_07780370.1| riboflavin biosynthesis protein RibF [Escherichia coli 2362-75]
 gi|331645128|ref|ZP_08346239.1| riboflavin biosynthesis protein RibF [Escherichia coli M605]
 gi|215263258|emb|CAS07573.1| bifunctional riboflavin kinase/FAD synthetase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289387|gb|EFR17281.1| riboflavin biosynthesis protein RibF [Escherichia coli 2362-75]
 gi|323190296|gb|EFZ75572.1| riboflavin biosynthesis protein RibF [Escherichia coli RN587/1]
 gi|331045885|gb|EGI18004.1| riboflavin biosynthesis protein RibF [Escherichia coli M605]
          Length = 313

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV  L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVRHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|127512031|ref|YP_001093228.1| riboflavin biosynthesis protein RibF [Shewanella loihica PV-4]
 gi|126637326|gb|ABO22969.1| riboflavin kinase / FMN adenylyltransferase [Shewanella loihica
           PV-4]
          Length = 311

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 165/311 (53%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GH  ++   +K A     P T+++F P 
Sbjct: 1   MELIRGI---HNILPRHQGCVLTIGNFDGVHRGHAEVIAALVKKAKQHGVPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  +    LS    +  +L+++G   L+   F  + A   AE FI+ +LV+ L V
Sbjct: 58  PQELFKGDNAPARLSLLRDKIVLLDELGIDRLLCVNFNQKFAAMPAEAFIEDLLVKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+  GEKYGF  V          + VSS+ IR  L KG+
Sbjct: 118 KYLVVGDDFCFGKQRRGNFEMLKAAGEKYGFAVVNTHSF-ILGDKRVSSTEIRGLLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + +   V HGEKIGRT+GFPTAN+ L   +    GV+A++        Y
Sbjct: 177 LEQARRLLGHPYALSGKVAHGEKIGRTIGFPTANIALKRKVSPVRGVFAVKLYWDGSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  FK ++ LK+ +
Sbjct: 237 EGVANVGFRPTVN-GQNCQLEVHLFDFEGDLYGRTVEVELVAKIRDEQPFKSLDALKLQI 295

Query: 299 GEDEKKARKIL 309
            +D  +A+ +L
Sbjct: 296 KDDADRAKALL 306


>gi|256043120|ref|ZP_05446062.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 296

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 133/295 (45%), Positives = 184/295 (62%), Gaps = 2/295 (0%)

Query: 32  LGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            GH  +LE+A+++A     P  VL+F PHPR+  +   P+  L+  + + +IL  MGF A
Sbjct: 1   RGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAEKAEILRLMGFDA 60

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           ++   FT E +  SAE F+Q +LVE L    V+TG  F FGK R G    L + G+K GF
Sbjct: 61  VMEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTPEFLCEAGKKAGF 120

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
               +D   +    +VSS+ IR  L++G V  AA LLGYR+ I  +VIHG+K+GRTLGFP
Sbjct: 121 SVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVIHGKKLGRTLGFP 180

Query: 210 TANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI 269
           TANM L+P   LK G+YA+RFR  D   Y GVA+FGR PT+   G  LLE+F+FDFS ++
Sbjct: 181 TANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPLLETFLFDFSGDL 240

Query: 270 YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           YG+   VSFF +LR E+KF  ++ L   M +DE +AR +L    P+S  DR++ F
Sbjct: 241 YGKTAAVSFFGFLRGEVKFDGLDSLIDQMKQDEAQARALLADVRPISGLDRMLSF 295


>gi|260853235|ref|YP_003227126.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O26:H11 str. 11368]
 gi|257751884|dbj|BAI23386.1| bifunctional riboflavin kinase and FAD synthetase [Escherichia coli
           O26:H11 str. 11368]
          Length = 313

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +   + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLGVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|157374332|ref|YP_001472932.1| riboflavin biosynthesis protein RibF [Shewanella sediminis HAW-EB3]
 gi|157316706|gb|ABV35804.1| riboflavin biosynthesis protein RibF [Shewanella sediminis HAW-EB3]
          Length = 311

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 113/311 (36%), Positives = 167/311 (53%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I  +  LP H  G V+ IGNFDG+H GH  ++ + ++ A     P T+++F P 
Sbjct: 1   MELIRGI--HNILPAHH-GCVLTIGNFDGVHRGHAEVISKLVQKARQLKVPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  +    LS    +  +LE++G   L+   F  + A+  AE FI K+LVE L V
Sbjct: 58  PQEMFRGENAPARLSILRDKIFLLEELGIDRLVCINFNAKFASLPAEDFIDKLLVESLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+  GE++ F  V          + VSS+ IR  L KG 
Sbjct: 118 KYLVVGDDFCFGKQRKGNFNMLKSAGEQHSFAVVSTQSFLLGDKR-VSSTEIRDLLAKGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    +  +Y
Sbjct: 177 MEQARRLLGHPFTLCGKVAHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKLYWDNSDTY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  F+ +E LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFDGDLYGRTVEVELVAKIRDEQPFQSLEALKRQI 295

Query: 299 GEDEKKARKIL 309
             D  KA+ +L
Sbjct: 296 NNDADKAKALL 306


>gi|324112588|gb|EGC06565.1| riboflavin biosynthesis protein RibF [Escherichia fergusonii B253]
          Length = 313

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPR--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGVEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|161504825|ref|YP_001571937.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160866172|gb|ABX22795.1| hypothetical protein SARI_02949 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 312

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 151/311 (48%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LV  L V
Sbjct: 58  PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVARLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQ  G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQTAGAEYGFAVSSTQTFCE-GGMRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  ARK  
Sbjct: 296 ARDELTARKFF 306


>gi|82542641|ref|YP_406588.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii Sb227]
 gi|81244052|gb|ABB64760.1| putative regulator [Shigella boydii Sb227]
 gi|332090434|gb|EGI95532.1| riboflavin biosynthesis protein RibF [Shigella boydii 3594-74]
          Length = 313

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVY +      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYVVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|293417900|ref|ZP_06660522.1| riboflavin biosynthesis protein RibF [Escherichia coli B185]
 gi|291430618|gb|EFF03616.1| riboflavin biosynthesis protein RibF [Escherichia coli B185]
          Length = 313

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 154/316 (48%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +  V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--ERCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|325577253|ref|ZP_08147737.1| riboflavin biosynthesis protein RibF [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160835|gb|EGC72956.1| riboflavin biosynthesis protein RibF [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 308

 Score =  352 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 117/313 (37%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +  +   P +L G  + IGNFDG+HLGH  IL    + AN  N P+ V+ F P 
Sbjct: 1   MQLIRGLHYS---PPYLSGCALTIGNFDGVHLGHQAILRHLRQKANALNLPMAVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   L + G   +I  KF    AN  AEQFI+  LV  L V
Sbjct: 58  PREYFMGDKAPARLMRLRDKLHYLAQAGVDVVIVAKFDRTFANLPAEQFIEDWLVRKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ G+++GF          ++ + +SS+ IR AL K  
Sbjct: 118 KFLSIGDDFKFGAKRLGNFAMLQQAGKRFGFEVEDSRTFCLDELR-ISSTAIREALAKDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQHAQNLLGKPYRILGRVIHGNKLGRTIGFPTANVRLHRQVNPVKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFS+ IYGQ   V F   +R EIKF   E LK  +
Sbjct: 237 NGVANMGKRPTIN-GTIQLLEVHLFDFSENIYGQMVEVEFCQKIRDEIKFPSFEALKAQI 295

Query: 299 GEDEKKARKILES 311
            +D K A+     
Sbjct: 296 EQDVKTAKAFFAK 308


>gi|242238038|ref|YP_002986219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dickeya
           dadantii Ech703]
 gi|242130095|gb|ACS84397.1| riboflavin biosynthesis protein RibF [Dickeya dadantii Ech703]
          Length = 313

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 153/317 (48%), Gaps = 6/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH ++LE+  +   A   P+ V+ F P 
Sbjct: 1   MQLIRGI---HNLQARHYGCVLTIGNFDGVHRGHQMLLERLKQEGRARGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L + G   L+  +F    A   A  FI  +LV  L V
Sbjct: 58  PLELFAGEKSPARLTRLRDKVKYLAQAGVDYLLCVEFDDTFAANHASTFISDLLVAKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R GD  +LQK G +  F  +       N  + VSS+ +R AL +  
Sbjct: 118 RFLVVGDDFRFGAGRVGDFLLLQKAGAEQEFDVISTATFC-NGGKRVSSTAVREALMRDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ F+I   V+HG ++GRT+GFPTAN+ L   +    GVYA+      +   
Sbjct: 177 LVLAEALLGHPFSISGRVVHGNELGRTIGFPTANLPLKRQVSPVSGVYAVSVYGLGEHPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +    LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVTGDRRQQLEVHLLDVTMDLYGRHIDVVMRKKLRNEQRFASLDALKQQI 296

Query: 299 GEDEKKARKILESSYPL 315
             D   AR       P+
Sbjct: 297 ANDVVAARAFFGLKTPV 313


>gi|56412318|ref|YP_149393.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361255|ref|YP_002140890.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198244244|ref|YP_002213999.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|56126575|gb|AAV76081.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197092730|emb|CAR58153.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197938760|gb|ACH76093.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 312

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 154/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PQELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGVEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  ARK  
Sbjct: 296 ARDELTARKFF 306


>gi|319405379|emb|CBI78998.1| Riboflavin biosynthesis protein ribf [Bartonella sp. AR 15-3]
          Length = 330

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 138/326 (42%), Positives = 201/326 (61%), Gaps = 2/326 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  F  ++    LP   +G V+AIGNFDG+HLGH  +L++A+ +      P  VL+F PH
Sbjct: 1   MFDFLRLQEYNLLPLAWRGAVLAIGNFDGVHLGHQAVLQKALDLSRERKRPSLVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++  Q S+ +  L+  + + +I + +GF  +I   F  + +  SA++FI  +L E L+V
Sbjct: 61  PKSFFQGSTSVDRLTQAAEKAEIFKILGFHGVIEQPFDAQFSALSADEFITVILKETLDV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  FRFG  ++G+   L +RGE+YGF  V I  L N + Q +SSS IR  L KG 
Sbjct: 121 SVVVTGENFRFGCQKSGNVSFLCQRGEEYGFEVVQIPCLCNAQRQTISSSFIRKLLLKGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V   AHLLGY + I S+VI GEK+GR LGFPTAN  +     L  GVYA++FR  +   Y
Sbjct: 181 VSQVAHLLGYHYRISSNVIQGEKLGRRLGFPTANQFVPIQTSLAHGVYAVKFRRANGVLY 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+++FG  PT+V NG  +LE+++FDF  ++YG+ CTVSF  +LR + KF ++E L   M
Sbjct: 241 DGISSFGCRPTVVSNGVPVLETYLFDFDGDLYGENCTVSFLQFLRRQEKFYELESLVAQM 300

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             DEK+A+ +L +  PLS  D  + F
Sbjct: 301 QHDEKEAQAVLRTKQPLSLLDEALTF 326


>gi|86136474|ref|ZP_01055053.1| riboflavin biosynthesis protein RibF [Roseobacter sp. MED193]
 gi|85827348|gb|EAQ47544.1| riboflavin biosynthesis protein RibF [Roseobacter sp. MED193]
          Length = 319

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 118/321 (36%), Positives = 171/321 (53%), Gaps = 8/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G  VAIGNFDG+H GH  +++ A   A  +P+ V++F PHPR
Sbjct: 1   MRIIRDYQF---VEQQDRGASVAIGNFDGVHRGHQSVIDLARAAAPQAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L  P  +   LEK+G   L +  F    +    E F +KV+ E L +  
Sbjct: 58  AFFAPDAPPFRLMSPEARASRLEKLGVERLYQLNFNAALSGLPPEDFARKVISEGLGLAH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R+G    LQ+ G + GF    I  L  + S  VSS+ IRTAL++G   
Sbjct: 118 VVVGADFCFGKGRSGTAADLQRFGAEMGFGVT-IAPLMEHSSDTVSSTAIRTALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +L +   IE +VI GE+ GR LG+PTANM +        GVYA+     D   + S
Sbjct: 177 DAAAMLSHWHRIEGEVIGGEQRGRDLGYPTANMSIDGLHPPAFGVYAVLVDVLDGPHRGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    + P  +E+F+FDF+  +YG   +V+  +YLRPE+KF  +E L   
Sbjct: 237 YQGAASIGVRPMFDGSHP-NIETFLFDFTGNLYGATLSVALVEYLRPEMKFDGLEALIAQ 295

Query: 298 MGEDEKKARKILESSYPLSER 318
           M  D  +AR IL++  P   R
Sbjct: 296 MDGDCARARHILDAEAPAELR 316


>gi|329296599|ref|ZP_08253935.1| riboflavin biosynthesis protein RibF [Plautia stali symbiont]
          Length = 312

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 154/317 (48%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L    +G V+ IGNFDG+H GH  ++ + I      N P+ V+   P 
Sbjct: 1   MKFIRGI---YNLKEQHRGCVLTIGNFDGVHRGHQALMAELIAEGRKRNLPVVVMLCEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L   G  A++  +F    A +SA+ FI ++LV+ L V
Sbjct: 58  PLELFAGDKAPARLTRLREKLKYLALAGVDAVVCVRFDRRFAAHSAQSFISELLVDKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF  +      +   + +SS+ +R AL +  
Sbjct: 118 KFLAVGDDFRFGAGRQGDFLLLQKAGAEYGFEVISTQTYCD-GGKRISSTAVRQALAQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ F+I   V+HG+ +GRT+GFPTAN+ L   +   +GV+A+      +   
Sbjct: 177 FAQAQQLLGHPFSISGRVVHGDALGRTIGFPTANLPLRRTVTPVKGVFAVEVLGLGEQPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D    +YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTV-KGLRQQLEVHLLDTHMNLYGRHIEVVLKQKIRDEQRFASLDALKEQI 295

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR+      P+
Sbjct: 296 AKDVVTARQFFGLKTPV 312


>gi|167623064|ref|YP_001673358.1| riboflavin biosynthesis protein RibF [Shewanella halifaxensis
           HAW-EB4]
 gi|167353086|gb|ABZ75699.1| riboflavin biosynthesis protein RibF [Shewanella halifaxensis
           HAW-EB4]
          Length = 311

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 170/314 (54%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V++IGNFDG+H GH  ++ + +K A     P  V++F P 
Sbjct: 1   MELIRGI---HNILPKHRGCVLSIGNFDGVHRGHAEVINRLVKKAKHLGLPAVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q  +    LS    +  +L+++    L+   F  + ++++AE FI+ +LV+ L V
Sbjct: 58  PRELFQGENAPARLSLLRDKIVLLDELKIDRLLCVNFNNKFSSFTAEDFIELLLVKALGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+K GEK+GF  V          + VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGKQRQGNFEMLRKAGEKHGFAVVSTQSF-ILGDKRVSSTEVRQLLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HGEKIGRTLGFPTAN+ L   +    GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGKVAHGEKIGRTLGFPTANIALKRKVSPVRGVFAVKLYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  F  ++ LK  +
Sbjct: 237 EGVANVGFRPTVN-GQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
            +D  +A+ +L S 
Sbjct: 296 KDDANRAKALLGSD 309


>gi|261250334|ref|ZP_05942910.1| riboflavin kinase/FMN adenylyltransferase [Vibrio orientalis CIP
           102891]
 gi|260939450|gb|EEX95436.1| riboflavin kinase/FMN adenylyltransferase [Vibrio orientalis CIP
           102891]
          Length = 314

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +H +G V+ IGNFDG+HLGH  +L Q  + A+    P TV++F+P 
Sbjct: 1   MELIRGI---HNIKSHHQGCVLTIGNFDGVHLGHQEVLRQVSEQASVLGLPSTVMTFDPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    AN SA++FI  +LV+ L V
Sbjct: 58  PLELFAKDKAPARLTRLRDKYVQLSKLNIERLLCVNFNHRFANQSADEFISDLLVKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +LQK G++YGF  V     R  + + VSS+ IR AL K  
Sbjct: 118 KFLVVGDDFCFGRGREGNFAMLQKAGKQYGFEVVSTQSFRLEQLR-VSSTAIRKALAKDK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +      +   
Sbjct: 177 LDAAAEMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYTVEALGLGEQPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF   +YG++  +   D +R E KF+  E LK  +
Sbjct: 237 GGVANIGNRPTVNGV-RQQLEVHLFDFKANLYGKQLEIVLLDKIRDEHKFESFEALKHQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|319425457|gb|ADV53531.1| riboflavin biosynthesis protein RibF [Shewanella putrefaciens 200]
          Length = 311

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRAFASQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L   GE++GF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFDMLMHAGERFGFTVVSTQSF-IVGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHSFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|301154982|emb|CBW14445.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           parainfluenzae T3T1]
          Length = 308

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 117/313 (37%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +  +Q    +L G  + IGNFDG+HLGH  IL    + AN  N P+ V+ F P 
Sbjct: 1   MQLIRGLHNSQP---YLSGCALTIGNFDGVHLGHQAILRHLRQKANALNLPMAVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   L + G   +I  KF    A+  AEQFI+  LV  L V
Sbjct: 58  PREYFMGDKAPARLMRLRDKLHYLAQAGVDVVIVAKFDRTFADLPAEQFIEDWLVRKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ G+++GF          ++ + +SS+ IR AL K  
Sbjct: 118 KFLSIGDDFKFGAKRLGNFAMLQQAGKQFGFEVEDSRTFCLDELR-ISSTAIREALAKDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQHAQNLLGKPYRIFGRVIHGNKLGRTIGFPTANVRLHRQVNPVKGVYAVKARLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   E LK  +
Sbjct: 237 NGVANMGKRPTIN-GTIQLLEVHLFDFSQNIYGQMIEVEFCHKIRDEIKFPSFEALKAQI 295

Query: 299 GEDEKKARKILES 311
            +D K A+     
Sbjct: 296 EQDVKTAKAFFAK 308


>gi|194430667|ref|ZP_03063109.1| riboflavin biosynthesis protein RibF [Escherichia coli B171]
 gi|194411289|gb|EDX27669.1| riboflavin biosynthesis protein RibF [Escherichia coli B171]
 gi|323160059|gb|EFZ46022.1| riboflavin biosynthesis protein RibF [Escherichia coli E128010]
          Length = 313

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I  +       +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGI--HNLSQASQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|307543905|ref|YP_003896384.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Halomonas
           elongata DSM 2581]
 gi|307215929|emb|CBV41199.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Halomonas
           elongata DSM 2581]
          Length = 343

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V   +    +L +   G V  IGNFDG+H GH  IL+Q ++ A +   P TV+ F P 
Sbjct: 1   MQVIRGL---HNLRDEHHGCVATIGNFDGVHRGHQAILDQLLERARSLSLPATVVVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++L + G   ++   F     + +A  FI++VLV+ L V
Sbjct: 58  PREFFAGDQAPPRLTRLRDKVRLLAEYGADRVLCLPFNDALRSLTARAFIEQVLVQGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG DR GD  +LQ  G   GF          +  + VSS+ +RT L  G+
Sbjct: 118 RHLVVGDDFRFGCDRRGDFELLQTVGTGSGFEVEHTRTFLLD-GERVSSTRVRTMLASGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA +LG  + +   V+   ++GRT+G PTAN+   P  L  +GVYA++         
Sbjct: 177 FDQAARMLGRPYRLGGRVMRDRQLGRTIGVPTANLPQPPHPLALQGVYAVKVELPGGRHA 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+    P +LE  +FDF +++YG+R TV     LR E+KF  +E LK  +
Sbjct: 237 EGVANIGWRPTVGSQRP-VLEVHLFDFDEDLYGERLTVLPCAKLRGEMKFDGLEALKAQI 295

Query: 299 GEDEKKARKILESS 312
           G D+ +AR+    +
Sbjct: 296 GADQARARRFFAET 309


>gi|300715261|ref|YP_003740064.1| riboflavin biosynthesis protein [Erwinia billingiae Eb661]
 gi|299061097|emb|CAX58204.1| Riboflavin biosynthesis protein [Erwinia billingiae Eb661]
          Length = 312

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 159/317 (50%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L    +G V+ IGNFDG+H GH  +L +  +     N P+ V+ F P 
Sbjct: 1   MKFIRGI---HNLREQHRGCVLTIGNFDGVHRGHQALLARLCEEGRQRNLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G  A++  +F    A  +AE F+  +LV+ L+V
Sbjct: 58  PLELFAADKAPARLTRLRDKVRYLSEAGVDAVLCVRFDRRFAALTAESFVTDLLVDKLDV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQ  G ++GF  +      ++  + +SS+ +R AL + +
Sbjct: 118 KFLAVGDDFRFGAGRQGDFLLLQHAGIEHGFDVISTQTFCDD-GKRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG+ F+I   V+HG+ +GRTLGFPTAN+ L   +   +GVYA+          
Sbjct: 177 LPLAAALLGHPFSISGRVVHGDALGRTLGFPTANLPLRRYVSPVKGVYAVEVLGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D +  +YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVA-GMRQQLEVHLLDVAMHLYGRHIDVVLCQKIRNEQRFASLDELKEQI 295

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR       P+
Sbjct: 296 AKDVVSARTFFGLKTPV 312


>gi|238758978|ref|ZP_04620149.1| FMN adenylyltransferase [Yersinia aldovae ATCC 35236]
 gi|238702789|gb|EEP95335.1| FMN adenylyltransferase [Yersinia aldovae ATCC 35236]
          Length = 295

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +  +    P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGLRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L ++G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAEVGVDYLLCVKFDPRFAAITAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    +  A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHNDDLALAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGRHIDVVLCAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|126739861|ref|ZP_01755552.1| riboflavin biosynthesis protein RibF [Roseobacter sp. SK209-2-6]
 gi|126719093|gb|EBA15804.1| riboflavin biosynthesis protein RibF [Roseobacter sp. SK209-2-6]
          Length = 315

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 115/314 (36%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G  VAIGNFDG+H GH  +++ A   A  +P+ V++F PHPR
Sbjct: 1   MRIVRDYQF---VEEQDRGASVAIGNFDGVHRGHQSVIDLARAAAPQAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L  P  +   LEK+G   L +  F    +    E F +KV+ E L ++ 
Sbjct: 58  EFFAPDAPPFRLMSPEARASRLEKLGVDRLYQLNFNSALSGLPPEDFARKVISEGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R+G    LQ+ G + GF    I  L  +    VSS+ IRTAL++G   
Sbjct: 118 VVVGADFCFGKGRSGSAEDLQRFGAEMGFGVT-IAPLMAHSENTVSSTAIRTALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
            AA +L +   +E +VI GE+ GR LGFPTANM +        GVYA+     D   + S
Sbjct: 177 EAAAMLSHWHRLEGEVIGGEQRGRELGFPTANMSIDGLHPPAFGVYAVLVDVLDGPHKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+F+FDF+  +YG   +V+  +YLRPE+KF  +E L   
Sbjct: 237 YQGAASVGVRPMFDGEHP-NIETFLFDFTGNLYGATLSVALVEYLRPEMKFDGLEALIAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D   AR IL +
Sbjct: 296 MTADCDSARDILAA 309


>gi|213426563|ref|ZP_03359313.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
          Length = 303

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 101/308 (32%), Positives = 152/308 (49%), Gaps = 7/308 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL + +
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 PGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKAR 306
             DE  AR
Sbjct: 296 ARDELTAR 303


>gi|163750657|ref|ZP_02157894.1| riboflavin biosynthesis protein RibF [Shewanella benthica KT99]
 gi|161329652|gb|EDQ00643.1| riboflavin biosynthesis protein RibF [Shewanella benthica KT99]
          Length = 311

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 168/314 (53%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I  +  LP H  G V+ IGNFDG+H GH  ++ + +K A   N P T++ F P 
Sbjct: 1   MELIRGI--HNILPAHH-GCVLTIGNFDGVHRGHAEVIAKLVKKARQLNVPATLMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  S    LS    +  +LE++G   L+   F  + A+ SA+ FI K+LVE L V
Sbjct: 58  PQEMFRGDSAPARLSSLRDKIILLEELGIDRLVCINFNAKFADLSAQDFIDKLLVESLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ  G+K+ F  V          + VSS+ IR  L KG+
Sbjct: 118 KYLVIGDDFCFGKQRKGNFEMLQSAGKKHQFAVVSTQSFALGDKR-VSSTEIRNQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F +   V HGEKIGRTLGFPTAN+ L   +    GV+A++        Y
Sbjct: 177 LEQARRLLGHPFILCGKVSHGEKIGRTLGFPTANIALKRQVSPVRGVFAVKMYWDGSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE  +FDF  ++YG+   V     +R E  FK ++ LK  +
Sbjct: 237 DGVANVGFRPTVN-GQVCLLEVHLFDFDDDLYGRTVEVELVAKIRDEKPFKSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  KA+ +L + 
Sbjct: 296 NNDADKAKALLGND 309


>gi|256025342|ref|ZP_05439207.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           sp. 4_1_40B]
          Length = 313

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKTPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 AHDELTAREFFGLTKP 312


>gi|126173297|ref|YP_001049446.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS155]
 gi|160874275|ref|YP_001553591.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS195]
 gi|125996502|gb|ABN60577.1| FMN adenylyltransferase / riboflavin kinase [Shewanella baltica
           OS155]
 gi|160859797|gb|ABX48331.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS195]
 gi|315266508|gb|ADT93361.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS678]
          Length = 311

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P T+++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L + G +YGF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFEMLVQAGIQYGFTVVSTQSFM-LGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|5881832|emb|CAB55633.1| riboflavin biosynthesis protein [Gluconobacter oxydans]
          Length = 307

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 108/309 (34%), Positives = 164/309 (53%), Gaps = 3/309 (0%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           + H     +++P   +  V A+GNFDG+H GH  +L+       + P++V++F+PHPRT+
Sbjct: 2   ILHT--DWRNIPAAARNTVAALGNFDGVHRGHVHLLDTLRMARPDHPLSVVTFDPHPRTL 59

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +   P F L  P ++   L + G   + +  F  E +  SAEQF+  VLV  L V  V 
Sbjct: 60  FRPQDPPFRLMLPDVRAAALGEQGVDHVFQIPFDAEFSRLSAEQFVNDVLVNGLGVAHVA 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG  R G+   L+     +G     + +L +     +SSS IR  L +G+   A
Sbjct: 120 CGADFAFGHRRTGNIERLETLLAPHGIGLTIVPQLSDEGG-PISSSRIRRLLQEGYPERA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A  LG  ++I   V+HG++ GR LGFPTAN+ L+  +    GVYA R    D     GVA
Sbjct: 179 AQELGRPWSITGPVMHGDQRGRLLGFPTANIPLTQHVEPARGVYAARVTLPDGRVIPGVA 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N GR PT+       LE  +FDF++++YGQ  +V+    LR E +F  +++LK  +  D 
Sbjct: 239 NIGRRPTINDGQESRLEVHLFDFNEDLYGQILSVALIALLREEKRFSGLDELKTQIAADA 298

Query: 303 KKARKILES 311
            +AR IL +
Sbjct: 299 AQARSILNA 307


>gi|312884037|ref|ZP_07743754.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368495|gb|EFP96030.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 311

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++  H KG V+ IGNFDG+HLGH  +L +    A     P  V++F P 
Sbjct: 1   MELIRGI---HNIQPHHKGCVLTIGNFDGVHLGHQEVLRRVDSQAKKLGVPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   +  +G   L+   F  + AN +A+QFI  +LV+ L V
Sbjct: 58  PMELFLGHKAPARLTRLRDKYAQIRTLGIDRLLCVSFNKKLANLAADQFIADLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+DRAGD  +LQK G++YGF  V        KS  VSS+ +R AL +  
Sbjct: 118 KFLVVGDDFCFGRDRAGDFSMLQKAGKEYGFDVVSTQSFC-LKSIRVSSTEVRKALVQNQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +   + +LG R++I   V HG KIGRTLGFPTAN+ L  ++    GVY +     + +  
Sbjct: 177 LSLVSQMLGRRYSISGRVSHGRKIGRTLGFPTANVPLKRNVSPISGVYIVEVYGINDSPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF+ ++YG++  +     LR E KF+  E LK  +
Sbjct: 237 GGVANIGHRPTV-DGKKQQLEVHLFDFNADLYGKQIEIVLLSKLRDEKKFESFELLKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 KLDAEAARVWLRQ 308


>gi|295098545|emb|CBK87635.1| FMN adenylyltransferase /riboflavin kinase [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 308

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 150/311 (48%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   K   A   P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + L + G   ++  +F    A  +A+ F+  +LV  L V
Sbjct: 58  PLELFAGEKSPARLTRLREKLRYLAESGVDYVLCVRFDRRFAALTAQNFVSDLLVRQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               VSS+ +R AL    
Sbjct: 118 QFLAVGDDFRFGAGRQGDFLLLQKAGLEYGFDVTSTMTFCE-GGVRVSSTAVRQALANDE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+      +  +
Sbjct: 177 LDTAETLLGHPFTISGRVVHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 YGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  AR+  
Sbjct: 296 ARDELTAREFF 306


>gi|317493352|ref|ZP_07951774.1| riboflavin biosynthesis protein RibF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918745|gb|EFV40082.1| riboflavin biosynthesis protein RibF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 312

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 155/317 (48%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L +  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNLRARHHGCVLTIGNFDGVHRGHQALLTRLKQEGKRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L   G   L+  +F  + A  SA  F++K+LVE L V
Sbjct: 58  PLELFSADKAPARLTRLRDKCHYLADAGVDYLLCVRFNRDFAANSAHDFVKKLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +L+  G ++GF     D       + +SS+ +R AL +  
Sbjct: 118 KYLMVGDDFRFGAGREGDYELLKLAGAQFGFTVTNSDSFCEGNKR-ISSTAVRQALQEDK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LDLAESLLGHPYSISGRVVHGDEVGRTMGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGI-RQQLEVHLLDTTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR     + P+
Sbjct: 296 ANDVVTARAFFGLATPV 312


>gi|120599902|ref|YP_964476.1| riboflavin biosynthesis protein RibF [Shewanella sp. W3-18-1]
 gi|120559995|gb|ABM25922.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp.
           W3-18-1]
          Length = 311

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRAFASQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L   GE++GF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFDMLMHAGERFGFTVVSTQSF-IVGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|262395189|ref|YP_003287043.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. Ex25]
 gi|262338783|gb|ACY52578.1| riboflavin kinase/FMN adenylyltransferase [Vibrio sp. Ex25]
          Length = 294

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 104/292 (35%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+Q  + A+    P  V++F P P  +         L+    + 
Sbjct: 2   LTIGNFDGVHKGHQQVLQQVSEQADRLSLPSVVMTFEPQPMELFAKDKAPARLTRLRDKF 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L K+    L+   F    A+ +AE+FI+ +LVE L VK ++ G  F FGK R G+  +
Sbjct: 62  VQLSKLDIDRLLCVNFNRHFASLTAEEFIRDLLVERLGVKFLVVGDDFCFGKGRTGNFAM 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ GEKYGF  V        + + VSS+ IR AL +  + +A  +LG  ++I   V HG
Sbjct: 122 LQEAGEKYGFDVVSTQSFCLQQLR-VSSTAIRQALARDDLHSAQQMLGRNYSISGRVSHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+       LE
Sbjct: 181 RKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGNKPVGGVANIGQRPTVNGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +FDF   +YG++  V     LR E KF+  E LK  +  D + AR  L  
Sbjct: 240 VHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAARVWLRQ 291


>gi|238797504|ref|ZP_04641002.1| FMN adenylyltransferase [Yersinia mollaretii ATCC 43969]
 gi|238718645|gb|EEQ10463.1| FMN adenylyltransferase [Yersinia mollaretii ATCC 43969]
          Length = 295

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L   G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLADAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL   +++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDNLVLAEALLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+     D     GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLDPEPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|238752261|ref|ZP_04613741.1| FMN adenylyltransferase [Yersinia rohdei ATCC 43380]
 gi|238709529|gb|EEQ01767.1| FMN adenylyltransferase [Yersinia rohdei ATCC 43380]
          Length = 295

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  KYLAEAGIDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALNDDDLVLAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLSSEPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGRHIDVVLRAKLRDEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|113971293|ref|YP_735086.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. MR-4]
 gi|117921575|ref|YP_870767.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. ANA-3]
 gi|113885977|gb|ABI40029.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. MR-4]
 gi|117613907|gb|ABK49361.1| riboflavin kinase / FMN adenylyltransferase [Shewanella sp. ANA-3]
          Length = 311

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L V
Sbjct: 58  PQELFRGENAPARLSLLRDKIILLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L + G +YGF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFEMLMQAGARYGFTVVSTQSFMV-GSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWDESDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|144898685|emb|CAM75549.1| riboflavin biosynthesis protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 331

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M     +     L   L+G VVA+GNFDG+H GH  ++  A +IA +  +   V++F PH
Sbjct: 1   MAPMRLVRHCGELTPDLQGCVVALGNFDGVHKGHQAVILTAKRIAQDLGVACGVMTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     + P F L+P  ++ +++E +G   L    F    A+ +A +F+  VL   L  
Sbjct: 61  PRAFFNPAQPPFRLTPFRVKARLIEALGIDLLFMQHFDQAFADMTALEFVGGVLATCLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  + FGK R G   +LQK  ++  F    +        +  SS+ +R AL  G 
Sbjct: 121 RHVVVGYDYVFGKGRKGTGALLQKAADEGAFGFTAVPPEMAKGGETYSSTRVREALVAGQ 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
              AA LLG+ + IE  V HG++ GRT+GFPTAN+ L        GVYA+R       D 
Sbjct: 181 PSVAARLLGHYWEIEGRVEHGDQRGRTIGFPTANIHLGEYQHPAAGVYAVRAGIDLGGDT 240

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVANFG  PT       +LE  + D + ++YG+   V+  D++RPE KF  +++LK
Sbjct: 241 QWLDGVANFGNRPTF-DKQDQILEVHLLDHNIDLYGRHLRVALVDFIRPERKFAGLDELK 299

Query: 296 IYMGEDEKKARKILESSY 313
             +  D ++AR IL + +
Sbjct: 300 TQIAADAQQARAILAARH 317


>gi|300948626|ref|ZP_07162710.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 116-1]
 gi|300956952|ref|ZP_07169204.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 175-1]
 gi|300316242|gb|EFJ66026.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 175-1]
 gi|300451852|gb|EFK15472.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 116-1]
          Length = 313

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGYVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ FI  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL   +
Sbjct: 119 KFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+      +   
Sbjct: 178 LALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPL 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK  +
Sbjct: 238 PGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQI 296

Query: 299 GEDEKKARKILESSYP 314
             DE  AR+    + P
Sbjct: 297 ARDELTAREFFGLTKP 312


>gi|310765127|gb|ADP10077.1| Riboflavin biosynthesis protein [Erwinia sp. Ejp617]
          Length = 314

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L Q        + P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLREQHRGCVLTIGNFDGVHRGHQALLAQLCAEGRRRHLPVVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + LE+ G   ++   F    A YSA++FI  +LV  L V
Sbjct: 58  PLELFAADKAPARLTRLREKLRYLEQAGVDTVLCVGFDRHFAAYSAQRFITDLLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF+ +      +   + +SS+ +R AL    
Sbjct: 118 QLLAVGDDFRFGAGRQGDFLLLQKAGVEYGFNVISTQTFCD-GGKRISSTAVRQALAADD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F+I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+      + + 
Sbjct: 177 LPLAQSLLGRPFSISGRVVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGERAL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V   D +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVTIDLYGRHIDVVLLDKIRDEQRFTSLDALKEQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D   AR+       + 
Sbjct: 296 ANDVVTARRFFGQQTSVQ 313


>gi|304412575|ref|ZP_07394180.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS183]
 gi|307303591|ref|ZP_07583344.1| riboflavin biosynthesis protein RibF [Shewanella baltica BA175]
 gi|304349051|gb|EFM13464.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS183]
 gi|306912489|gb|EFN42912.1| riboflavin biosynthesis protein RibF [Shewanella baltica BA175]
          Length = 311

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P T+++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L + G +YGF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFEMLVQAGIQYGFTVVSTQSFM-LGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|146292161|ref|YP_001182585.1| riboflavin biosynthesis protein RibF [Shewanella putrefaciens
           CN-32]
 gi|145563851|gb|ABP74786.1| FMN adenylyltransferase / riboflavin kinase [Shewanella
           putrefaciens CN-32]
          Length = 311

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVITNLVQKAKQLSLPSTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVILLDELGVERLVCVNFNRTFASQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L   GE++GF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFDMLMHAGERFGFTVVSTQSF-IVGSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEDDIYGKHVEVELVAKLRDEQPFDSLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|15603526|ref|NP_246600.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12722067|gb|AAK03745.1| RibF [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 311

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 113/315 (35%), Positives = 163/315 (51%), Gaps = 7/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +LP +L G  + IGNFDG+HLGH  IL    + A+  N P+ V+ F P 
Sbjct: 1   MRLIRGI---HNLPPNLSGCALTIGNFDGVHLGHQAILRHLRQKADALNLPVVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   L +     ++  +F    A+ +AE+FI+  LV+ L V
Sbjct: 58  PREYFTGDAIPARLMRLRDKLHYLAQAKVDYVLCIRFNENFASQTAEEFIEDWLVKKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK GE +GF          ++ + +SS+ IR AL +  
Sbjct: 118 RFLSIGDDFRFGAKRQGDFALLQKSGEAFGFFVEDNHSFCCDELR-ISSTAIREALAEDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + I   V HG K+GRT+GFPTAN+ L   +   +GVYA++ R ++Q  Y
Sbjct: 177 LAYAEKMLGKPYRILGRVAHGNKLGRTIGFPTANIPLHRQVNPVKGVYAVKVRLKNQEIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+      LLE  IFDF   IYGQ   V F   +R E KF   E LK  +
Sbjct: 237 HGVANIGKRPTINGVVQ-LLEVHIFDFHSTIYGQCLEVEFCHKIRNEFKFPSFEALKEQI 295

Query: 299 GEDEKKARKILESSY 313
            +D + A+    +  
Sbjct: 296 AQDVETAKHFFRTQQ 310


>gi|254464154|ref|ZP_05077565.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           Y4I]
 gi|206685062|gb|EDZ45544.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           Y4I]
          Length = 310

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 171/314 (54%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + E    + +  +G  VAIGNFDG+HLGH  ++E A K    +P+ V++F PHPR
Sbjct: 1   MRIVRDFEF---VEHQDRGATVAIGNFDGVHLGHQSVIELARKAVPGAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 SP F L     +   LEK+G   L    F    ++ + E+F + V+ E L ++ 
Sbjct: 58  EYFAPDSPPFRLMRAETRAHRLEKLGVERLYELNFNTALSSLTPEEFARDVISEGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK RAGD   LQ+ GE+YGF    I  L       VSS+ IR AL++G   
Sbjct: 118 VVVGADFCFGKGRAGDAADLQRFGEQYGFGVT-IAPLMEYSEHAVSSTAIRNALSEGRPA 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +A  +LG+   IE  VI GE+ GR LGFPTANM +      + GVYA+     D   + S
Sbjct: 177 DARAMLGHWHRIEGVVIGGEQRGRELGFPTANMSIDGLHQPRFGVYAVLVDVLDGPHKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+++FDFS ++YG   +V   ++LRPE+KF  +E L   
Sbjct: 237 YFGAASIGVRPMFGGVVP-NIETYLFDFSGDLYGATLSVGLVEFLRPELKFDGLEALTAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL +
Sbjct: 296 MDADCARAREILAA 309


>gi|152999654|ref|YP_001365335.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS185]
 gi|217974392|ref|YP_002359143.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS223]
 gi|151364272|gb|ABS07272.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS185]
 gi|217499527|gb|ACK47720.1| riboflavin biosynthesis protein RibF [Shewanella baltica OS223]
          Length = 311

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 106/314 (33%), Positives = 164/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P T+++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPSTLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    LS    +  +L+++G   L+   F    AN  AE FI+++LV  L V
Sbjct: 58  PQELFSGDNAPARLSLLRDKVMLLDELGVERLVCVNFNRTFANQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L + G +YGF  V         S  VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFEMLVQAGIQYGFTVVSTQSFM-LGSLRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKCYWDNSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|58039698|ref|YP_191662.1| riboflavin kinase [Gluconobacter oxydans 621H]
 gi|58002112|gb|AAW61006.1| Riboflavin kinase [Gluconobacter oxydans 621H]
          Length = 307

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 107/309 (34%), Positives = 164/309 (53%), Gaps = 3/309 (0%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           + H     +++P   +  V A+GNFDG+H GH  +L+       + P++V++F+PHPRT+
Sbjct: 2   ILHT--DWRNIPAAARNTVAALGNFDGVHRGHVHLLDTLRMARPDHPLSVVTFDPHPRTL 59

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +   P F L  P ++   L + G   + +  F  E +  S+EQF+  VLV  L V  V 
Sbjct: 60  FRPQDPPFRLMLPDVRAAALGEQGVDHVFQIPFDAEFSRLSSEQFVNDVLVNGLGVAHVA 119

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG  R G+   L+     +G     + +L +     +SSS IR  L +G+   A
Sbjct: 120 CGADFAFGHRRTGNIERLETLLAPHGIGLTIVPQLSDEGG-PISSSRIRRLLQEGYPERA 178

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A  LG  ++I   V+HG++ GR LGFPTAN+ L+  +    GVYA R    D     GVA
Sbjct: 179 AQELGRPWSITGPVMHGDQRGRLLGFPTANIPLTQHVEPARGVYAARVTLPDGRVIPGVA 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N GR PT+       LE  +FDF++++YGQ  +V+    LR E +F  +++LK  +  D 
Sbjct: 239 NIGRRPTINDGQESRLEVHLFDFNEDLYGQILSVALIALLREEKRFSGLDELKTQIAADA 298

Query: 303 KKARKILES 311
            +AR IL +
Sbjct: 299 AQARSILNA 307


>gi|238764640|ref|ZP_04625585.1| FMN adenylyltransferase [Yersinia kristensenii ATCC 33638]
 gi|238697132|gb|EEP89904.1| FMN adenylyltransferase [Yersinia kristensenii ATCC 33638]
          Length = 295

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   L+  KF    A  +A+ F+ K+LVE L VK +  G  FRFG +R GD  +
Sbjct: 62  RYLAEAGVDYLLCVKFDPRFAAITAQAFVAKLLVEKLGVKFLTVGDDFRFGAERQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDDLVLAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDITMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIAHDVVTARTFFGLKTPV 295


>gi|262360600|gb|ACY57321.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D106004]
          Length = 295

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  KYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDDLVLAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+       T   GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPLYGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG    V     LR E +F  +E LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQIANDVVTARTFFGLKTPV 295


>gi|119897497|ref|YP_932710.1| riboflavin kinase/FMN adenylyltransferase [Azoarcus sp. BH72]
 gi|119669910|emb|CAL93823.1| riboflavin kinase / FMN adenylyltransferase [Azoarcus sp. BH72]
          Length = 332

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 107/309 (34%), Positives = 158/309 (51%), Gaps = 5/309 (1%)

Query: 7   IEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++++ +P+H   +  V+ IGNFDG+H GH  +L+     A     P  VL+F PHPR  
Sbjct: 1   MQVSRGIPDHAARQPSVLTIGNFDGVHRGHQALLKLLTDKARALGLPAVVLTFEPHPREY 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    L+    +  +L   G   +   +F    A  S   FI  +LV  L V+ + 
Sbjct: 61  FAPDAAPARLASLREKLLLLAAAGVDRVHVCRFDARLAQLSPTAFIDDLLVRGLGVRHLY 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD  +LQ+ G  +GF    +  L + + + VSSS +R AL  G + +A
Sbjct: 121 IGDDFRFGARRAGDFAMLQQAGAAHGFAVESMATL-DVEGERVSSSAVRAALADGDMAHA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG  ++I   VIHG+KIGR +G+PTAN+Q+        GVYA+R          GVA
Sbjct: 180 ERLLGRPYSIAGRVIHGDKIGRRIGYPTANVQMKHRKPPFTGVYAVRVEGLTDGLVDGVA 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G L LE  +FD++ + YG    V F   LR E +F  ++ L   +G D 
Sbjct: 240 SMGIRPTINSAGSLRLEVNLFDWNSDCYGAHLRVHFLHRLRGEARFDSLDALTAQIGRDA 299

Query: 303 KKARKILES 311
             AR  L +
Sbjct: 300 DDARAWLAA 308


>gi|188532858|ref|YP_001906655.1| Riboflavin biosynthesis protein [Erwinia tasmaniensis Et1/99]
 gi|188027900|emb|CAO95757.1| Riboflavin biosynthesis protein [Erwinia tasmaniensis Et1/99]
          Length = 312

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 159/317 (50%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L Q        N P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLRAQHRGCVLTIGNFDGVHRGHLALLAQLCAEGRERNLPVMVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + LE+ G  A++   F    A YSA++FI  +LV  L V
Sbjct: 58  PLELFAAEKAPARLTRLREKLRYLEQAGVDAVLCVSFDRHFAAYSAQRFITDLLVNRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF  +      +N  + +SS+ +R AL + +
Sbjct: 118 QLLAVGDDFRFGAGRQGDFLLLQKAGVEYGFDVISTQTFCDN-GKRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F+I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+        + 
Sbjct: 177 LPLARSLLGRPFSISGRVVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGPRAL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++Y +   V   D +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVTIDLYERHIEVVLLDKIRDEQRFNSLDALKEQI 295

Query: 299 GEDEKKARKILESSYPL 315
             D   AR+    S  +
Sbjct: 296 ANDVVTARRFFGQSTSV 312


>gi|46912218|emb|CAG19013.1| putative FAD synthase [Photobacterium profundum SS9]
          Length = 306

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 111/299 (37%), Positives = 157/299 (52%), Gaps = 4/299 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+HLGH  +L Q I  A     P TV++F P P  +  + +    L+    + 
Sbjct: 2   LTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQPLELFAADNAPARLTRFRDKY 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L+K G   L+   F  + AN SAE F++++LVE L VK ++ G  FRFGK R G+  +
Sbjct: 62  TQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGVKFLVVGDDFRFGKGRRGNFEM 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+  G+++GF  V        + Q VSS+ IR AL    +  AA +LG  ++I   V HG
Sbjct: 122 LEAAGQEFGFVVVSTQSFCMLE-QRVSSTAIRHALVNDQLPLAASMLGRSYSISGRVSHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            K+GRT+GFPTAN+ L   +    GVYA+     D     GVAN G  PT+       LE
Sbjct: 181 RKLGRTIGFPTANVPLKRRVSPVSGVYAVEVFGVDGAPLPGVANVGHRPTVNGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
             +FDF  ++YG +  V     LR EIKF+  + LK  +  D + AR  L     +  R
Sbjct: 240 VHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQIERDAQTARVWLSERNNVQLR 298


>gi|258406569|ref|YP_003199311.1| riboflavin biosynthesis protein RibF [Desulfohalobium retbaense DSM
           5692]
 gi|257798796|gb|ACV69733.1| riboflavin biosynthesis protein RibF [Desulfohalobium retbaense DSM
           5692]
          Length = 313

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 170/313 (54%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           MH+F ++   Q  P+  +G    IGNFDG+HLGH  +L + +  A N   P   ++F+PH
Sbjct: 1   MHIFRSLTDIQ--PHVAQGSCATIGNFDGVHLGHQALLRRVMDSARNSRLPSVAVTFDPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I   +P F ++    + +I++K+G   L+   FT E A    EQF+   L++ L +
Sbjct: 59  PLRVILGKTPPF-ITLTDQKIEIMDKLGLDYLLCLPFTREMAGMEPEQFVLTFLIKGLNL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FGK R GD  +LQ+ G KYGF    I  ++ N    +SS+ IR  + +G 
Sbjct: 118 KHLVIGYDYAFGKKRRGDFSLLQELGTKYGFTAEQIGPVQKN-GDTISSTRIRELVEQGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  + +   V+ G   G   LGFPTAN++L  ++  + GVYA+    Q Q  
Sbjct: 177 VHEARPLLGRWYRVVGSVVEGRNRGGRLLGFPTANLKLIDELAPQPGVYAVWAEFQGQI- 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  VAN G NPT   N  L +E  I DF+++IYG    V F + LR E KF  ++ L   
Sbjct: 236 HKAVANIGYNPTF-GNDALSVEVHIMDFNKDIYGSELRVHFVERLRSERKFDSLDALMEQ 294

Query: 298 MGEDEKKARKILE 310
           + +D    R++L+
Sbjct: 295 IYQDIASGRELLD 307


>gi|238786670|ref|ZP_04630471.1| FMN adenylyltransferase [Yersinia frederiksenii ATCC 33641]
 gi|238725038|gb|EEQ16677.1| FMN adenylyltransferase [Yersinia frederiksenii ATCC 33641]
          Length = 295

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  KYLAEAGIDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFHL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-AGLRISSTAIRQALNDDDLVLAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTMGFPTANLPLKRLVAPVKGVYAVDVYGLGPKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|259907373|ref|YP_002647729.1| Riboflavin biosynthesis protein [Erwinia pyrifoliae Ep1/96]
 gi|224962995|emb|CAX54478.1| Riboflavin biosynthesis protein [Erwinia pyrifoliae Ep1/96]
 gi|283477204|emb|CAY73111.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           pyrifoliae DSM 12163]
          Length = 314

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 7/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L Q        + P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLREQHRGCVLTIGNFDGVHRGHQALLAQLCAEGRRRHLPVVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + LE+ G   ++   F    A YSA++FI  +LV  L V
Sbjct: 58  PLELFTADKAPARLTRLREKLRYLEQAGVDTVLCVGFDRHFAAYSAQRFITDLLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF+ +      +   + +SS+ +R AL    
Sbjct: 118 QLLAVGDDFRFGAGRQGDFLLLQKAGVEYGFNVISTQTFCD-GGKRISSTAVRQALAADD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F+I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+      + + 
Sbjct: 177 LPLAQSLLGRPFSISGRVVHGDALGRTIGFPTANLPLRRTVSPVKGVYAVEVLGLGERAL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V   D +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVTIDLYGRYIDVVLLDKIRDEQRFTSLDALKEQI 295

Query: 299 GEDEKKARKILESSYPLS 316
             D   AR+       + 
Sbjct: 296 ANDVVTARRFFGQQTSVQ 313


>gi|292489406|ref|YP_003532293.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora CFBP1430]
 gi|292898375|ref|YP_003537744.1| bifunctional riboflavin kinase\FMN adenylyltransferase [Erwinia
           amylovora ATCC 49946]
 gi|291198223|emb|CBJ45329.1| riboflavin biosynthesis protein [includes: riboflavin kinase; FMN
           adenylyltransferase] [Erwinia amylovora ATCC 49946]
 gi|291554840|emb|CBA22712.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora CFBP1430]
 gi|312173571|emb|CBX81825.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Erwinia
           amylovora ATCC BAA-2158]
          Length = 312

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L Q          P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLREQHRGCVLTIGNFDGVHRGHQALLAQLCAEGRQRHLPVVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + LE+ G  A++   F    A +SA++FI  +LV+ L V
Sbjct: 58  PLEMFAAEKAPARLTRLREKLRYLEQAGVDAVLCIGFDRHFAAHSAQRFITDLLVKKLRV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF+ +      +   + +SS+ +R AL +  
Sbjct: 118 QLLAVGDDFRFGAGRQGDFLLLQKAGVEYGFNVISTQTFCD-GGKRISSTAVRQALAEDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F+I   V+HG+ +GRTLGFPTAN+ L   +   +GVYA+      + + 
Sbjct: 177 LPLAQSLLGRPFSISGRVVHGDALGRTLGFPTANLPLRRTVSPVKGVYAVEVLGLGERAL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V   D +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQQLEVHLLDVAIDLYGRHIEVVLLDKIRDEQRFTSLDALKEQI 295

Query: 299 GEDEKKARKIL 309
             D   AR+  
Sbjct: 296 ANDVVTARRFF 306


>gi|238795020|ref|ZP_04638615.1| FMN adenylyltransferase [Yersinia intermedia ATCC 29909]
 gi|238725671|gb|EEQ17230.1| FMN adenylyltransferase [Yersinia intermedia ATCC 29909]
          Length = 295

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 96/296 (32%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   L+  KF    A  +A+ F+ ++LV+ L VK +  G  FRFG +R GD  +
Sbjct: 62  RYLAEAGVDYLLCVKFDPRFAANTAQAFVAQLLVDKLGVKFLTVGDDFRFGAERQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALFDDDLVLAEALLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG    V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLDALKQQIAHDVVTARTFFGLKTPV 295


>gi|238782685|ref|ZP_04626715.1| FMN adenylyltransferase [Yersinia bercovieri ATCC 43970]
 gi|238716345|gb|EEQ08327.1| FMN adenylyltransferase [Yersinia bercovieri ATCC 43970]
          Length = 295

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG +R GD  +
Sbjct: 62  RYLAEAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAERQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-SGLRISSTAIRQALHDDDLVQAEVLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPEPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|114048531|ref|YP_739081.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp. MR-7]
 gi|113889973|gb|ABI44024.1| FMN adenylyltransferase / riboflavin kinase [Shewanella sp. MR-7]
          Length = 311

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+H GH  ++   ++ A     P TV++F P 
Sbjct: 1   MELIRGI---HNILSSHHGCVLTIGNFDGVHRGHAQVVANLVQKAKQLSLPPTVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + +  +    LS    +  +L+++G   L+   F    A+  AE FI+++LV  L V
Sbjct: 58  PQELFRGENAPARLSLLRDKIILLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L + G +YGF  V         SQ VSS+ +R  L KG+
Sbjct: 118 KYLVVGDDFCFGQGRKGNFEMLMQAGARYGFTVVSTQSFMV-GSQRVSSTAVREQLAKGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FT+   V HG+KIGRT+GFPTAN+ L  +++   GV+A++    +   Y
Sbjct: 177 LEQARRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWDESDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  +IYG+   V     LR E  F  ++ LK  +
Sbjct: 237 EGVANIGFRPTVN-GQVCQLEVHLFDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFGND 309


>gi|315634926|ref|ZP_07890208.1| riboflavin biosynthesis protein RibF [Aggregatibacter segnis ATCC
           33393]
 gi|315476478|gb|EFU67228.1| riboflavin biosynthesis protein RibF [Aggregatibacter segnis ATCC
           33393]
          Length = 312

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 166/317 (52%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +LP +L    + IGNFDG+HLGH  IL      A+    P+ V+ F P 
Sbjct: 1   MQLIRGL---GNLPQNLHTCALTIGNFDGVHLGHQAILRHLRTKADELHLPMVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR    + +    L     + + L++ G   +I  KF    A+  A+QFI+  LV  L V
Sbjct: 58  PREYFCAENAPARLMRLRDKLRYLKQAGVDMVIVAKFDRTFADLPAQQFIEDWLVRKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ GEK+GF          +  + +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGAKRQGNFVLLQQAGEKFGFTVEDNRSFCLDALR-ISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  + I   VIHG ++GRT+GFPTAN++L   +   +GVYA+R R +    +
Sbjct: 177 LTLAEKLLGRPYRILGRVIHGNELGRTIGFPTANIRLHRQVNPVKGVYAVRVRLKSGAFF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+      LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  +
Sbjct: 237 NGVANIGTRPTINGVNQ-LLEAHLFDFQGDLYGQWLDVELCHKIRNEMKFPSFDDLKAQI 295

Query: 299 GEDEKKARKILESSYPL 315
            +D + A+ + ++   L
Sbjct: 296 AKDVETAKNVFKTDRTL 312


>gi|212636474|ref|YP_002312999.1| riboflavin kinase /FAD synthetase [Shewanella piezotolerans WP3]
 gi|212557958|gb|ACJ30412.1| Riboflavin kinase / FAD synthetase [Shewanella piezotolerans WP3]
          Length = 309

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 101/308 (32%), Positives = 165/308 (53%), Gaps = 4/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    ++     G V+ IGNFDG+H GH  ++ + ++ A   + P  V++F P P+   +
Sbjct: 2   IRGIHNILPQHHGCVLTIGNFDGVHRGHAEVINRLVEKAKHLDLPAVVMTFEPQPQEFFR 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +    LS    +  +L+++    ++   F  + A+Y+AE F++++LV+ L VK ++ G
Sbjct: 62  GENAPARLSLLRDKVMLLDELSIERMLCINFNKKFADYTAEDFVEQLLVKALGVKYLVVG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FGK R G+  +L+K GEK+GF  V          + VSS+ +R  L +G++  A  
Sbjct: 122 DDFCFGKQRQGNFDMLRKAGEKFGFAVVSTQSFVLGDKR-VSSTEVRRLLAEGNMEQARR 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ F +   V HG+KIGRT+GFPTAN+ L   +    GV+A++    +   Y GVAN 
Sbjct: 181 LLGHPFILSGKVAHGQKIGRTIGFPTANIALKRKVTPVRGVFAVKLYWDNSDIYEGVANV 240

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+       LE  +FDF  ++YG+   V     +R E  F  ++ LK  +  D  +
Sbjct: 241 GFRPTVN-GQVCQLEVHLFDFDGDLYGKTVEVELVAKIRDEQPFGSLDALKKQIKNDADR 299

Query: 305 ARKILESS 312
           A+ +L S 
Sbjct: 300 AKALLGSD 307


>gi|318607186|emb|CBY28684.1| riboflavin kinase; FMN adenylyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 295

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 148/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L   G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLANAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    ++ A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-SGLRISSTAIRQALYDDDLVLAETLLGHLYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+        S  GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVEVYGLGPKSLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + E+YG    V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDITMELYGCHIDVVLRAKLRNEQRFASLDALKQQIANDVVTARTFFGLKTPV 295


>gi|307941700|ref|ZP_07657055.1| riboflavin biosynthesis protein RibF [Roseibium sp. TrichSKD4]
 gi|307775308|gb|EFO34514.1| riboflavin biosynthesis protein RibF [Roseibium sp. TrichSKD4]
          Length = 332

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 123/318 (38%), Positives = 186/318 (58%), Gaps = 3/318 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           F  I     +P+ LKGGVVAIGNFDG+H GH  +L  A++   N   P+  +SF PHPR+
Sbjct: 9   FFRITSLDEMPDALKGGVVAIGNFDGVHRGHQAVLNTALETGRNQDIPVYAMSFEPHPRS 68

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
               S+P+F L+P   +  +++  G   ++   FT + A+  AEQF++ +L++ L +   
Sbjct: 69  FFNPSNPVFRLTPSVQKAAVMKACGLDGIVELPFTKDFASIEAEQFVKNILLDKLAIHHA 128

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG  F FGK RAG    L+  G ++ F    +++  +  +  +SSS IR  L +G +  
Sbjct: 129 VTGFDFHFGKARAGTPDYLRNAGAEHQFGVTIVEQETDEGANDISSSRIRACLEEGDITL 188

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLGYR+  E++V HG+K GR LG+PTAN+Q++ +  LK GVY +R  T D   + GV
Sbjct: 189 ANGLLGYRWFFEAEVRHGDKRGRDLGYPTANLQMAENCPLKHGVYTVRVTTPDGFVFGGV 248

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR P    +G  + E F+FDF+ ++YGQ   V+   YLR E  F  ++ L   M  D
Sbjct: 249 ASYGRRPMF-DHGAPMFEVFLFDFTGDLYGQTLRVNVISYLRGEETFDSVDALIAQMDRD 307

Query: 302 EKKARKILESSYPLSERD 319
             +A+ +L S  PLSE D
Sbjct: 308 SNEAKTVLGSLQPLSELD 325


>gi|197335008|ref|YP_002155221.1| riboflavin biosynthesis protein RibF [Vibrio fischeri MJ11]
 gi|197316498|gb|ACH65945.1| riboflavin biosynthesis protein RibF [Vibrio fischeri MJ11]
          Length = 310

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 106/315 (33%), Positives = 158/315 (50%), Gaps = 7/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    KG V+ IGNFDG+HLGH  +L+Q    A     P  V++F P 
Sbjct: 1   MELIRGI---HNITPDHKGCVMTIGNFDGVHLGHQQVLQQVKSKAKELGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    +   L+K+    L+   F  + A  SA++F++ +LV  L V
Sbjct: 58  PMEFFAKEKAPARLTRLRDKFVQLKKLEIERLLCINFNQKFAEQSADEFVEDLLVRLLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+K+GF  V        + Q VSS+ IR+AL    
Sbjct: 118 KFLVVGDDFCFGKHRKGNFAMLQEAGKKHGFEVVNTQSFC-LQQQRVSSTAIRSALLHNK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + + A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +  +    
Sbjct: 177 LDDVATMLGRHYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSEGKQL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FD+   +YGQ+  V     LR E KF+  + LK  +
Sbjct: 237 GGVANIGHRPTVN-GARQQLEVHFFDYKGNLYGQQLDVELLYKLRDEHKFESFDALKQQI 295

Query: 299 GEDEKKARKILESSY 313
             D + AR  L  + 
Sbjct: 296 ELDSQAARVWLSENR 310


>gi|209694171|ref|YP_002262099.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Aliivibrio
           salmonicida LFI1238]
 gi|208008122|emb|CAQ78264.1| riboflavin biosynthesis protein RibF [Aliivibrio salmonicida
           LFI1238]
          Length = 310

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  + +G V+ IGNFDG+HLGH  +L+Q    A     P  V++F+P 
Sbjct: 1   MELIRGI---HNITPNHQGCVMTIGNFDGVHLGHQQVLQQVKGKAKQLGLPSVVMTFDPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    +   L K+    L+   F  + A  +A++F++ +LV+ L V
Sbjct: 58  PMEFFAKEKAPARLTRLRDKFVQLNKLDIDRLLCINFNHKFAQQTADEFVEHLLVKLLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQK GEKYGF  V        K Q VSS+ IR AL +  
Sbjct: 118 KFLVIGDDFCFGKHRLGNFDMLQKAGEKYGFEVVNTKSFCIEK-QRVSSTAIRNALAENR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + + A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +       
Sbjct: 177 LKDVAVMLGRDYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSSGKQL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FD+   +YGQ+  V     LR E KF+  + LK  +
Sbjct: 237 GGVANIGHRPTV-DGVRQQLEVHFFDYKGNLYGQQLDVELLCKLRDEHKFESFDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D + AR  L  +
Sbjct: 296 ELDSQAARVWLSEN 309


>gi|261868575|ref|YP_003256497.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413907|gb|ACX83278.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 308

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 109/313 (34%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +LP +L    + IGNFDG+HLGH  IL    + A+    P+ V+ F P 
Sbjct: 1   MQLIRGL---GNLPQNLHACALTIGNFDGVHLGHQAILRHLREKADELHLPMVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   LE+ G   +I  KF    A   A+QFI+  LV  L+V
Sbjct: 58  PREYFCGEDAPARLMHLRDKLHYLEQAGVDIVIVAKFDRTFAALPAQQFIEDWLVRKLKV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ GE++GF          ++ + +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGAKRQGNFAMLQQAGEQFGFTVEDNRSFCLDELR-ISSTAIRLALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   VIHG ++GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LPLAEKLLGHPYRILGRVIHGNELGRTIGFPTANIRLHRQVNPVKGVYAVKVRLKSGAFF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+      LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  +
Sbjct: 237 NGVANIGTRPTINGVNQ-LLEAHLFDFQGDLYGQWLEVELCHKIRNEMKFPSFDTLKAQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+K+ E+
Sbjct: 296 AQDVETAKKVFEA 308


>gi|284006373|emb|CBA71609.1| riboflavin biosynthesis protein [Arsenophonus nasoniae]
          Length = 309

 Score =  347 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  +  G V+ IGNFD +H GH  +L+   +       P  V+ F P 
Sbjct: 1   MKLVRGI---HNIRAYHHGCVLTIGNFDAVHRGHQALLKHLKQQGQRLGLPTMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P      ++    L+    + K   + G   L+  KF    A+ S + F+ ++LVE L V
Sbjct: 58  PLEFFLGANAPARLTRLRDKIKYFSEYGVDYLLCVKFNPPFASLSPQAFVSQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGKDR GD   L+  GE+YGF     +   +   Q VSS+ +R AL   +
Sbjct: 118 KFLAIGDDFRFGKDRQGDFKYLRAAGEQYGFEVANTESFCD-AGQRVSSTAVRQALLSDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +L+G+ + +   V+HG ++G  +GFPTAN+  +  ++  +GVY +          
Sbjct: 177 LTLAENLMGHPYRLSGRVVHGSQLGSKIGFPTANIPFNCLVMPVKGVYVVEVYGLADHPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VAN G  PT+   G   +E  + D   +IYG+   V     LR E +F  I++L+  +
Sbjct: 237 PAVANIGTRPTVN-GGDRQIEVHLIDRRMDIYGRHIDVVLRKKLRDEQRFASIDELRQQI 295

Query: 299 GEDEKKARKILESS 312
           GED   AR+  +SS
Sbjct: 296 GEDIMAARQFFQSS 309


>gi|114327131|ref|YP_744288.1| FMN adenylyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315305|gb|ABI61365.1| riboflavin kinase [Granulibacter bethesdensis CGDNIH1]
          Length = 325

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 111/311 (35%), Positives = 164/311 (52%), Gaps = 4/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +   I   + +P   +G  VA+GNFDG+HLGH  ++  A      +P+  L+F PHPR
Sbjct: 13  MRI---ITDWRHIPPEARGASVALGNFDGVHLGHEAVIRAAHAARPTAPLMALTFEPHPR 69

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +   P F L+  + +   L ++G + ++   F    +   AE+FI  VL+  L+ K 
Sbjct: 70  EFFRPYDPPFRLTLSAERADALARLGVTWVVELAFDEAFSLMEAEEFISGVLLAGLDAKH 129

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FG  R GD  +L  R E  G     +  + + +   +SS+ IR  L  G+  
Sbjct: 130 LACGADFAFGHRRGGDITLLSTRSEALGIGLTIVPPVMDAEG-PLSSTRIRRLLQDGYPE 188

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG  + I   V HG+K GRT+GFPTAN+     +    GVYA+  R  D T Y G
Sbjct: 189 RAAQLLGRPWGIRGIVSHGDKRGRTIGFPTANIPFGRHLEPARGVYAVTARLPDGTEYPG 248

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN GR PT+       LE+ +FDFS ++Y Q  TVS   +LR E KF  ++ L+  + +
Sbjct: 249 VANIGRRPTVNEGPESRLEAHLFDFSGDLYDQDITVSLHAFLRAERKFAGLDDLRGQIAQ 308

Query: 301 DEKKARKILES 311
           D  +ARK+L+ 
Sbjct: 309 DATEARKLLDQ 319


>gi|119386370|ref|YP_917425.1| riboflavin biosynthesis protein RibF [Paracoccus denitrificans
           PD1222]
 gi|119376965|gb|ABL71729.1| FMN adenylyltransferase / riboflavin kinase [Paracoccus
           denitrificans PD1222]
          Length = 309

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 118/314 (37%), Positives = 172/314 (54%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + H+ +   +LP   +G  VA+GNFDGIHLGH  +++ A    + +P+ V++F PHPR
Sbjct: 1   MRIHHDWK---ALPLDARGATVAMGNFDGIHLGHRSVIDAARAACD-APLGVITFEPHPR 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L ++G   L    F    A  + E F ++VLVE L V+ 
Sbjct: 57  EFFAPDAPPFRLMNVESRANRLARLGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRH 116

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  GT F FG+ R+GD   L + G + GF    +  L  + +   SS+ IR AL +G   
Sbjct: 117 VTVGTDFCFGRKRSGDAQTLARLGREMGFGVT-VAPLIGDGAVQYSSTAIRKALAEGRTR 175

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTS 237
           +A  +LG+   I+ +V+HG+K GR LG+PTANM +    L   G+YA+        D+ S
Sbjct: 176 DAERMLGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGS 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N P  LE  IFDF+ ++YGQ  +V+  +YLRPE KF  +E L   
Sbjct: 236 YKGVASLGVRPMFGENRP-NLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQ 294

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL +
Sbjct: 295 MDRDSARAREILAT 308


>gi|217970196|ref|YP_002355430.1| riboflavin biosynthesis protein RibF [Thauera sp. MZ1T]
 gi|217507523|gb|ACK54534.1| riboflavin biosynthesis protein RibF [Thauera sp. MZ1T]
          Length = 312

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 149/314 (47%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   I             V+ IGNFDG+HLGH  +L      A     P  VL+F PH
Sbjct: 1   MQVHRGIPEQAD-----TAAVLTIGNFDGVHLGHQALLSLLTDKARALGLPAVVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     L+    +  +L   G       +F    A   A+ FI  +LV  L V
Sbjct: 56  PREYFSPADAPARLASLREKLLLLSAAGVDRCHVCRFDARFAAQPAQAFIDDILVRGLGV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R G+  +L+  G + GF    +  L     + VSSS +R AL +G 
Sbjct: 116 RHLFIGDDFRFGARRQGNFAMLRAAGAEGGFGVESMPTLAV-AGERVSSSAVRAALAEGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA LLG  ++I   V HG+K+GR LGFPTAN+Q+        GVY +          
Sbjct: 175 LAHAARLLGRPYSIAGRVSHGDKLGRQLGFPTANIQMKHRRPALGGVYVVSVEGLASGPV 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT   NG   LE  +FD++Q+ YG    V F   LR E KF  ++ L+  +
Sbjct: 235 AGVANIGLRPTATANGRARLEVHLFDWTQDCYGAHIRVHFLHRLRAEQKFPSLDALRAQI 294

Query: 299 GEDEKKARKILESS 312
             D + AR  L ++
Sbjct: 295 ALDSQTARDWLAAN 308


>gi|254447493|ref|ZP_05060959.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           HTCC5015]
 gi|198262836|gb|EDY87115.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           HTCC5015]
          Length = 321

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 3/315 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           + +        +     KG V  IGNFDG+H GH  ++   Q        P  V+SF P 
Sbjct: 8   IQILRRAPAPGAHRREQKGCVATIGNFDGVHRGHQKVIAGLQVAGARLGLPSVVISFEPL 67

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + + L+++G +  +   F    A    E FIQ+VLVE L V
Sbjct: 68  PREYFAGRQSPPRLTRFREKAEQLDQLGVARFLCMPFDDGLAQQCPEDFIQQVLVEGLGV 127

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG+DRAGD  +L++ GE+YGF  +    +  +  + +SS+ IR  L +G 
Sbjct: 128 RYLVVGDDFRFGRDRAGDFALLKRAGERYGFEVIDTQTVTEDAKR-ISSTRIRELLERGD 186

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG R+ +   V HG+K GR +G+PTAN+ +       +G++ +R    ++   
Sbjct: 187 LDEAAELLGRRYAMSGRVAHGDKRGRIMGYPTANIHIHRQKTPVQGIFVVRMHGLEEGPV 246

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT   +G  +LE  +FDF++ IYG+   V F   +R E KF  +E L   +
Sbjct: 247 DGVASLGVRPTFEGDGKAVLEVHLFDFARSIYGEHVQVEFLHKIRDEEKFDSMETLIAAI 306

Query: 299 GEDEKKARKILESSY 313
            +D + AR    S+ 
Sbjct: 307 DDDARCARAWFASAR 321


>gi|90412465|ref|ZP_01220468.1| hypothetical protein P3TCK_13873 [Photobacterium profundum 3TCK]
 gi|90326502|gb|EAS42908.1| hypothetical protein P3TCK_13873 [Photobacterium profundum 3TCK]
          Length = 306

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 111/299 (37%), Positives = 156/299 (52%), Gaps = 4/299 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+HLGH  +L Q I  A     P TV++F P P  +  + +    L+    + 
Sbjct: 2   LTIGNFDGVHLGHQAVLRQVITKAQSLGLPATVMTFEPQPLELFAADNAPARLTRFRDKY 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L+K G   L+   F  + AN SAE F++++LVE L VK ++ G  FRFGK R G+  +
Sbjct: 62  TQLKKTGVERLLCVNFNAQFANMSAEDFVRRLLVEQLGVKFLVVGDDFRFGKGRRGNFEM 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+  G ++GF  V        + Q VSS+ IR AL    +  AA +LG  ++I   V HG
Sbjct: 122 LEAAGREFGFVVVSTQSFCMLE-QRVSSTAIRHALVNDQLPLAASMLGRPYSISGRVSHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            K+GRT+GFPTAN+ L   +    GVYA+     D     GVAN G  PT+       LE
Sbjct: 181 RKLGRTIGFPTANVPLKRRVSPVSGVYAVEVIGVDGAPLPGVANVGHRPTVNGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
             +FDF  ++YG +  V     LR EIKF+  + LK  +  D + AR  L     +  R
Sbjct: 240 VHLFDFQSDLYGCQIEVVLHHKLRNEIKFESFDALKAQIERDAQTARVWLFERNNVQLR 298


>gi|269137939|ref|YP_003294639.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Edwardsiella tarda EIB202]
 gi|267983599|gb|ACY83428.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Edwardsiella tarda EIB202]
 gi|304557989|gb|ADM40653.1| Riboflavin kinase / FMN adenylyltransferase [Edwardsiella tarda
           FL6-60]
          Length = 320

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L +  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNLRARHRGCVLTIGNFDGVHRGHRALLARLRQEGERLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    L+    + + L   G  A++  +F  + A++SA+ F++ +LVE L V
Sbjct: 58  PLEMFAPQNAPARLTRLRDKCRYLADAGVDAVLCVRFDRQFASHSAQDFVKHLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG +R GD  +LQ  G+ YGF             + VSS+ +R AL    
Sbjct: 118 KFLMIGDDFRFGAEREGDYHMLQAAGKAYGFTVTNSLSFCVGD-RRVSSTAVRHALRHDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LALAESLLGHPYRIAGRVVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGLTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGI-RQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
            +D   AR+    + P+   
Sbjct: 296 AQDVVAAREFFGLTTPVQSL 315


>gi|152981109|ref|YP_001352519.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Janthinobacterium sp. Marseille]
 gi|151281186|gb|ABR89596.1| riboflavin biosynthesis protein RibF [Janthinobacterium sp.
           Marseille]
          Length = 326

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 108/330 (32%), Positives = 171/330 (51%), Gaps = 13/330 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF  +    S         +AIGNFDG+H GH  +L +  ++A+   +   V++F PH
Sbjct: 1   MKVFRGLPNAAS----RAPCALAIGNFDGVHRGHQALLARLREVASKMGLESAVMTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR          S     ++    + + L K G   +I   F    A+ S ++F++K+LV
Sbjct: 57  PREFFAARAGDPSKAPTRIASLRDKLQSLAKAGVDRVIVEHFNAHFASLSPQEFVEKILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L VK +I G  F +G  RAG+   L + G++YGFH      + ++    +SSS +R A
Sbjct: 117 QGLHVKWLIVGDDFCYGAKRAGNVATLIEAGKQYGFHVESQPTVTSSTGTRISSSAVREA 176

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G    A  LLG+ + +   VIHG+K+GRT+GFPT N++++       G+Y ++    
Sbjct: 177 LLHGDFARAEELLGHPYAMSGHVIHGKKLGRTIGFPTLNVRVAHKHPALSGIYIVQVHGL 236

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D+    GVA+ G  PT+  +G +LLE+ +FD+SQ+ YG+   V F   LR E K+ D+  
Sbjct: 237 DEQPLPGVASIGVRPTVDDSGRVLLETHLFDYSQQCYGRLIRVEFLKKLRDEEKYIDLPT 296

Query: 294 LKIYMGEDEKKARKILE--SSYPLSERDRI 321
           L   +  D  +AR   +  +    S  DRI
Sbjct: 297 LTAAINRDAIEARAYFKQLTDAATSATDRI 326


>gi|317046854|ref|YP_004114502.1| riboflavin biosynthesis protein RibF [Pantoea sp. At-9b]
 gi|316948471|gb|ADU67946.1| riboflavin biosynthesis protein RibF [Pantoea sp. At-9b]
          Length = 312

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 156/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L    +G V+ IGNFDG H GH  ++ + ++       P+ V+ F P 
Sbjct: 1   MKFIRGI---YNLTQQHRGCVLTIGNFDGFHRGHQALMAELVEEGRKRQLPVIVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L     + K L++ G  A++  +F    A +SA+ FI ++LVE L V
Sbjct: 58  PLELFAGDKAPARLMRLREKLKYLKQAGVDAVLCVRFDRRFAAHSAQSFISELLVEKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF  +      +   + +SS+ +R AL +  
Sbjct: 118 KFLAVGDDFRFGAGRQGDFLLLQKAGVEYGFDVISTQTFCD-GGKRISSTAVRQALAQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
            + A  LLG+ F+I   V+HG+ +GRT+GFPTAN+ L   +   +GV+A+      +   
Sbjct: 177 FVQAQTLLGHPFSISGRVVHGDALGRTIGFPTANLPLRRTVTPVKGVFAVEVLGLGEQPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D    +YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTV-KGLRQQLEVHLLDTHMNLYGRHIDVVLKQKIRDEQRFASLDALKEQI 295

Query: 299 GEDEKKARKILESSYPL 315
            +D   AR+      P+
Sbjct: 296 AKDVVTARQFFGLKTPV 312


>gi|113460334|ref|YP_718395.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           somnus 129PT]
 gi|170718711|ref|YP_001783411.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           somnus 2336]
 gi|112822377|gb|ABI24466.1| FMN adenylyltransferase [Haemophilus somnus 129PT]
 gi|168826840|gb|ACA32211.1| riboflavin biosynthesis protein RibF [Haemophilus somnus 2336]
          Length = 314

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 112/317 (35%), Positives = 162/317 (51%), Gaps = 5/317 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +      N   P   +G  V IGNFDG+HLGH  IL+     A   N P+ V+ F P 
Sbjct: 1   MQLIRGFH-NLPEPLKQQGCAVTIGNFDGVHLGHQSILQHLKAKAKQLNLPVVVMLFEPQ 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    Q       L     +   L ++G   +   KF    A  SAEQFI   LV+ L++
Sbjct: 60  PYEYFQGDQAPARLMRLRDKLAYLAQLGVDYVFCVKFNRTFAQLSAEQFISDCLVKHLKM 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG +R GD  +LQK+G++  F       L+ N  Q +SS+ IR AL++ +
Sbjct: 120 KFLSIGDDFRFGLNREGDFRLLQKKGQQQSFIVEDNRSLQLND-QRISSTAIRQALSEDN 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  + I   V HG K+GRT+GFPTAN+ L   +   +GVY ++ R ++   +
Sbjct: 179 LALAEKLLGKPYRIYGRVAHGNKLGRTIGFPTANIYLHRQVNPIKGVYVVKVRLKNGDIF 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+      LLE  +F+F +++YGQ   + F   +R E KF  +  LK  +
Sbjct: 239 QGVANIGKRPTINGVKQ-LLEVHLFNFDRDLYGQSLQIEFCHKIRHEKKFPSLNALKNQI 297

Query: 299 GEDEKKARKILESSYPL 315
             D   A+K  +    L
Sbjct: 298 ENDVVVAKKYFQQVLNL 314


>gi|83309931|ref|YP_420195.1| FAD synthase [Magnetospirillum magneticum AMB-1]
 gi|82944772|dbj|BAE49636.1| FAD synthase [Magnetospirillum magneticum AMB-1]
          Length = 351

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 105/318 (33%), Positives = 170/318 (53%), Gaps = 9/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  +      L    +G VVA+GNFDG+HLGH  ++  A +IA +  +   V++F PH
Sbjct: 23  MRLIRHC---GELSPDHRGCVVALGNFDGVHLGHQAVILTARRIAQDLGVAHAVMTFEPH 79

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++     P F L+P  ++ +++E +G   L +  F  + A  +A +F+  VLV  ++ 
Sbjct: 80  PRSLFNPDQPPFRLTPFRVKSRLIEALGTDFLYQQHFDRDFAAMTALEFVGGVLVGCMQA 139

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  + FGK R G    LQK GE+ GF    +     +  +  SS+ +R  L  G 
Sbjct: 140 SHVVVGYDYVFGKGRLGTGAFLQKCGEESGFGVTVVPPAMADHGETYSSTAVREHLVAGR 199

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
              AA LLG+ + +E  V HG+  GR LGFPTAN++L        GVYA+R    +    
Sbjct: 200 PDAAARLLGHYWEVEGRVEHGDARGRLLGFPTANLRLGEYQRPASGVYAVRAGIDKGGAT 259

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + GVANFGR PT      L+ E  + DF++++YG+   V+  +++RPE +F  + +L 
Sbjct: 260 VWHDGVANFGRRPTFDKTDELM-EVHLLDFNEDLYGRHLRVALVEHIRPERRFSGLAELT 318

Query: 296 IYMGEDEKKARKILESSY 313
             +  D +  R++L + +
Sbjct: 319 TQITADVETGRRLLAARH 336


>gi|308185614|ref|YP_003929745.1| regulator [Pantoea vagans C9-1]
 gi|308056124|gb|ADO08296.1| putative regulator [Pantoea vagans C9-1]
          Length = 309

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L    +G V+ IGNFDG+H GH  ++ +  +     N P+ V+ F P 
Sbjct: 1   MKFIRGI---HNLNEQHRGCVLTIGNFDGVHRGHQALMSRLCEEGRKRNLPVVVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + + + G   ++  +F    A  SA++FI  +LV+ L+V
Sbjct: 58  PLELFAGDKAPARLTRLREKLRYMAEAGVDKVLCVRFDRRFAALSAQRFISDLLVDKLDV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF  V  +   +   + +SS+ +R AL    
Sbjct: 118 KYLAVGDDFRFGAGRQGDFLLLQKAGAEYGFEVVSTETFCD-GGKRISSTAVRQALAADD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+ +GRTLGFPTAN+ L   +   +GVYA+  +       
Sbjct: 177 LALAQSLLGHPFTISGRVVHGDALGRTLGFPTANLPLRRSVSPVKGVYAVEVQGLTPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +E LK  +
Sbjct: 237 PGVANIGTRPTV-KGLRQQLEVHLLDINMDLYGRHIDVVLKQKIRNEQRFASLEALKEQI 295

Query: 299 GEDEKKARKIL 309
             D   AR+  
Sbjct: 296 ANDVVTARQFF 306


>gi|293391731|ref|ZP_06636065.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952265|gb|EFE02384.1| riboflavin biosynthesis protein RibF [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 310

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 109/312 (34%), Positives = 164/312 (52%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +LP +L    + IGNFDG+HLGH  IL    + A     P+ V+ F P 
Sbjct: 1   MQLIRGL---GNLPQNLHACALTIGNFDGVHLGHQAILRHLREKAGELHLPMVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   LE+ G   +I  KF    A   A+QFI+  LV  L+V
Sbjct: 58  PREYFCGEDAPARLMRLRDKLHYLEQAGVDTVIVAKFDRTFAALPAQQFIKDWLVRKLKV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ GE++GF          ++ + +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGAKRQGNFAMLQQAGEQFGFTVEDNRSFCLDELR-ISSTAIRLALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   VIHG+++GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LPLAEKLLGHPYRILGRVIHGDELGRTIGFPTANIRLHRQVNPVKGVYAVKVRLKSGAFF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+      LLE+ +FDF  ++YGQ   V     +R E+KF   + LK  +
Sbjct: 237 NGVANIGTRPTINGVNQ-LLEAHLFDFQGDLYGQWLEVELCHKIRNEMKFPSFDTLKAQI 295

Query: 299 GEDEKKARKILE 310
            +D   A+K+ E
Sbjct: 296 AQDVVTAKKVFE 307


>gi|59711073|ref|YP_203849.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio
           fischeri ES114]
 gi|59479174|gb|AAW84961.1| bifunctional riboflavin kinase/FAD synthetase [Vibrio fischeri
           ES114]
          Length = 310

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 106/315 (33%), Positives = 158/315 (50%), Gaps = 7/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    KG V+ IGNFDG+HLGH  +L+Q    A     P  V++F P 
Sbjct: 1   MELIRGI---HNITPDHKGCVMTIGNFDGVHLGHQQVLQQVKSKAKELGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    +   L+K+    L+   F  + A  SA++F++ +LV  L+V
Sbjct: 58  PMEFFAKEKAPARLTRLRDKFVQLKKLEIERLLCINFNQKFAEQSADEFVEDLLVRLLDV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +LQ+ G+K+GF  V        + Q VSS+ IR+AL    
Sbjct: 118 KFLVVGDDFCFGKHRKGNFAMLQEAGKKHGFEVVNTQSFC-LQQQRVSSTAIRSALLHNK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + + A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY ++ +       
Sbjct: 177 LDDVATMLGRHYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVQAKDSKGKQL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE   FD+   +YGQ+  V     LR E KF+  + LK  +
Sbjct: 237 GGVANIGHRPTVN-GARQQLEVHFFDYKGNLYGQQLDVELLYKLRDEHKFESFDALKQQI 295

Query: 299 GEDEKKARKILESSY 313
             D + AR  L  + 
Sbjct: 296 ELDSQAARVWLSENR 310


>gi|260426202|ref|ZP_05780181.1| riboflavin biosynthesis protein RibF [Citreicella sp. SE45]
 gi|260420694|gb|EEX13945.1| riboflavin biosynthesis protein RibF [Citreicella sp. SE45]
          Length = 310

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 170/314 (54%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +  +      +G  VAIGNFDG+HLGH  ++  A +    +P  VL+F PHPR
Sbjct: 1   MRIIRDYQYVEP---QDRGASVAIGNFDGVHLGHQAVIRMAREAGGGAPCGVLTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 SP F L  P  +   LEK+G   L    F    A  + E+F ++V+ E L ++ 
Sbjct: 58  EYFAPDSPPFRLMSPEARTSRLEKLGVERLYELNFNSALAALTPEEFARRVISEGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK+RAGD   L++ G + GF    + E+  ++   VSS+ IR ALT G+  
Sbjct: 118 VVVGADFCFGKNRAGDVDDLKRFGVEMGFGVT-VAEILEHRGGQVSSTAIRKALTDGNPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTS 237
            AA  LG+   IE  V+ GE+ GR LG+PTANM +      ++GVYA+       + + +
Sbjct: 177 EAAAQLGHWHRIEGVVVGGEQRGRELGYPTANMSIEGLHPPRQGVYAVVVEVITGEHKGN 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    N P  LE+FIFDF  ++YG   +V   +YLRPE  F  ++ L   
Sbjct: 237 YHGAASLGVRPMFGENTP-NLETFIFDFKGDLYGATLSVGLVEYLRPEQTFDGLDALITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+ILE+
Sbjct: 296 MDADCARAREILEA 309


>gi|192359046|ref|YP_001983672.1| riboflavin biosynthesis protein RibF [Cellvibrio japonicus Ueda107]
 gi|190685211|gb|ACE82889.1| riboflavin biosynthesis protein RibF [Cellvibrio japonicus Ueda107]
          Length = 344

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 3/312 (0%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQ 64
           I    +L    +G V  IG+FDG+HLGH  IL+Q +    ++  P  V+ F P P     
Sbjct: 34  IRGLHNLRPWHRGCVATIGSFDGVHLGHQAILKQLLDAANSHQLPAVVILFEPQPHEFFA 93

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L   G   ++   F     + SAE F++++LV+ L ++ ++ G
Sbjct: 94  GDKAPARLMRLREKVQALRAAGVQRVLCLHFNQHLRSLSAEAFVEQILVQGLGIRHLVVG 153

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG DR GD  +LQ  G++YGF       L+ +  +  SS+ IR  L +G   +A  
Sbjct: 154 DDFRFGCDRRGDFALLQTLGDEYGFAVTDTCTLQIDGERA-SSTRIRQLLEQGDFAHAQK 212

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  + I   V++G+++GR LG PTAN+QL       +GV+A+  R  D + + GVAN 
Sbjct: 213 LLGKPYEISGRVVYGKQLGRQLGVPTANVQLRRYRSPLQGVFAVLVRFADGSLHQGVANV 272

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+  +   LLE  +FDFS+ +YG    V F   LR E KF  ++ L+  +  D  +
Sbjct: 273 GLRPTVSGDRKPLLEVHLFDFSRMVYGAVIQVRFLYKLRDEQKFASLDALRAQLQNDIAQ 332

Query: 305 ARKILESSYPLS 316
           A+   +S    S
Sbjct: 333 AKTYFQSQQAES 344


>gi|158421722|ref|YP_001523014.1| riboflavin kinase [Azorhizobium caulinodans ORS 571]
 gi|158328611|dbj|BAF86096.1| riboflavin kinase [Azorhizobium caulinodans ORS 571]
          Length = 328

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 123/311 (39%), Positives = 175/311 (56%), Gaps = 5/311 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F  ++  + LP  L   V+AIGNFDG+H GH  ++  A  +      P   L+F PHPR+
Sbjct: 19  FQVVQGIRPLPEPLARPVLAIGNFDGVHRGHQAVIATARAMGARLGRPTLALTFEPHPRS 78

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
             Q S P+F L+P   +   LE  G +  I   F    A  SAE F+ +VLV    +   
Sbjct: 79  FFQPSVPLFRLTPAREKLDALEATGLAGAIVLPFDGTLAALSAEAFVAEVLVGTFGIAGA 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  F FGK R+G    L+++G ++GF    ++ L       +SS+ IR AL  G V +
Sbjct: 139 AVGFDFHFGKARSGSPAFLKEQGAQHGFPVEVVEALLEADDT-ISSTAIRRALESGQVGH 197

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AAH+LG  +++ S VIHG+K GR LG+PTAN+ L  +I L  G+YA++    D   +  V
Sbjct: 198 AAHMLGRHWSLRSVVIHGDKRGRDLGYPTANLALPEEIQLAFGIYAVKLTV-DGIPHDAV 256

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A++GR PT   NG  LLE  IFDFS ++YG+   V+F  YLRPE+KF  +++L   M  D
Sbjct: 257 ASYGRRPTF-DNGRALLEVHIFDFSGDLYGREVEVAFHGYLRPELKFSSVDELVRQMDAD 315

Query: 302 EKKARKILESS 312
            + AR IL +S
Sbjct: 316 SRAARAILAAS 326


>gi|114564055|ref|YP_751569.1| riboflavin biosynthesis protein RibF [Shewanella frigidimarina
           NCIMB 400]
 gi|114335348|gb|ABI72730.1| riboflavin kinase / FMN adenylyltransferase [Shewanella
           frigidimarina NCIMB 400]
          Length = 311

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I  +  LP+H  G V+ IGNFDG+H GH  ++   +  A+    P  +++F P 
Sbjct: 1   MELIRGI--HNILPSHH-GCVLTIGNFDGVHRGHAQVISSLVSKAHHFQLPAMLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+   + +     LS    + ++L+++    L+   FT   AN  AE FI+++LV+ L V
Sbjct: 58  PQERFRGTDAPARLSLLRDKIRLLDELKIDQLLCINFTEAFANQPAEAFIEELLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L   G+++GF  V         S  VSS+ +R  L  GH
Sbjct: 118 KYLVVGDDFCFGKGRLGNFDMLVAAGKEFGFTVVSTQSFVV-GSLRVSSTAVREQLALGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F +   V HG+K+GRT+GFPTAN+ L   ++   GV+A+R        Y
Sbjct: 177 LEQARRLLGHPFILSGKVAHGQKLGRTIGFPTANIALKRHVVPVRGVFAVRLYWDGSDIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDFS ++YG+R  V     +R E  F+ ++ LK  +
Sbjct: 237 DGVANVGFRPTVN-GQTCRLEVHLFDFSGDLYGKRVEVELVAKIRDEQPFESLDALKKQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANEARALFSND 309


>gi|218778406|ref|YP_002429724.1| riboflavin biosynthesis protein RibF [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759790|gb|ACL02256.1| riboflavin biosynthesis protein RibF [Desulfatibacillum
           alkenivorans AK-01]
          Length = 311

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 161/314 (51%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  N+E   ++       V+ IGNFDG+H+GH  +  + I+ A+        ++F PH
Sbjct: 1   MQLIENLE---AIKQPFSKAVITIGNFDGVHIGHQALFSEVIQKADSIGGSSMAMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++  +    ++    + +++ + G  AL+   F    A+ S ++F++ +L++ L V
Sbjct: 58  PARFLKKENFPPLITLYEQKVELISRTGLDALVVVPFNEAFASLSPQEFVEDILIKRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTK 176
           K +I G  + FGK R G+   LQ+  E   F  + +  +       + +SS+ IR  +  
Sbjct: 118 KVLIVGPDYCFGKGREGNVEYLQQIAEPLDFELMVVPWIGQAGPDGERISSTRIRELVQD 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           G +  A  LLG  + +   V+ G   G   LGFPTAN+ L+ ++  K GVYA+  +  D 
Sbjct: 178 GKIEEAKRLLGRDYQVRGMVVKGRNRGGKLLGFPTANIHLTDELCPKTGVYAVTMQVDD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  VAN G +PT   +    +E    DFS ++Y ++  V+F   LR EIKF +++ L 
Sbjct: 237 VVYPAVANIGYSPTF-DDYIFTVEVHALDFSGDLYDKKIKVNFIARLRGEIKFPNLDALI 295

Query: 296 IYMGEDEKKARKIL 309
             + ED K AR+I+
Sbjct: 296 EQIREDIKIAREII 309


>gi|149911070|ref|ZP_01899698.1| hypothetical protein PE36_22870 [Moritella sp. PE36]
 gi|149805896|gb|EDM65884.1| hypothetical protein PE36_22870 [Moritella sp. PE36]
          Length = 310

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 112/311 (36%), Positives = 160/311 (51%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L  H +G V+ IGNFDG+HLGH  +L Q I+ A   N P TV++F P 
Sbjct: 1   MELIRGI---HNLKPHHQGCVLTIGNFDGVHLGHQSVLRQLIEKAKQLNLPATVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I        L+    +   L+      L+   F  + A  SA++FI ++LV  L V
Sbjct: 58  PLEMIIGDKAPARLTRLRDKYAALKDQHIDQLLCVNFNSKFAALSADEFITQLLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQ  G KYGF  V +D     +++ VSS+ IR AL +  
Sbjct: 118 KYLVVGDDFRFGHKRTGDFAMLQAAGAKYGFDVVSMDTFSVAQAR-VSSTMIRDALAQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG  F+I   V HG K+GRT+GFPTAN+ L   +    GVY +        + 
Sbjct: 177 LDLAAELLGRPFSIFGKVAHGAKLGRTIGFPTANIPLKRCVDPINGVYVVEVLGISDDAI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +F+F  ++YG++  V     LR E KF   + L+  +
Sbjct: 237 QGVANIGKRPTVGGV-RTQLEVNLFNFDGDLYGKQLEVVLKKRLRGEQKFASFDVLRQQI 295

Query: 299 GEDEKKARKIL 309
             D   A+   
Sbjct: 296 ERDVIAAKTFF 306


>gi|239993318|ref|ZP_04713842.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii ATCC
           27126]
          Length = 306

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 110/312 (35%), Positives = 158/312 (50%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M     +    ++  H KG V+ IG FDG+H GH  +L   ++ A +   P TV+ F P 
Sbjct: 1   MEFIRGLN---NVKPHHKGCVLTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         +SP   + ++L + G   L+  +F  E A  SA+ F+  +LV+ L V
Sbjct: 58  PEEVFMPDKAPARISPLREKYELLRQQGVDRLLAVRFNAEFAKQSADTFVHDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +L+  G +YGF  V       + +  +SS+ +R AL    
Sbjct: 118 KFLVVGDDFRFGNGRKGDFEMLEAAGRQYGFEVVSTHSFTMH-AHRISSTAVREALADSD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              +  +LG  F I   V+HGEK GRT+GFPTAN+ L        GV+A+R    D   Y
Sbjct: 177 FGLSTEMLGRPFAIHGRVVHGEKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+       LE  IFD S ++YG+  TV     +R EIKF   E LK  +
Sbjct: 236 NGVANIGTRPTVNGVRN-QLEVHIFDLSSDLYGKPITVFPMAKIRDEIKFDSFEALKDQI 294

Query: 299 GEDEKKARKILE 310
             D  +AR +L 
Sbjct: 295 QADAAQARLLLA 306


>gi|114767094|ref|ZP_01445977.1| riboflavin biosynthesis protein RibF [Pelagibaca bermudensis
           HTCC2601]
 gi|114540747|gb|EAU43813.1| riboflavin biosynthesis protein RibF [Roseovarius sp. HTCC2601]
          Length = 310

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 164/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +  +      +G  VAIGNFDG+H GH  ++  A     ++P+ VL+F PHPR
Sbjct: 1   MRIIRDYQYVEP---QDRGASVAIGNFDGVHRGHQAVIGLARAAGGDAPLGVLTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 SP F L     +   LEK+G   L    F    A  + E+F +KV+ + L +K 
Sbjct: 58  EYFAPESPPFRLMSAKARASRLEKLGIERLYEINFNAALAALTPEEFARKVIKDGLGLKH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG  RAG    L++ GE+ GF    + E+  ++   VSS+ IR ALT G   
Sbjct: 118 VVVGADFCFGNKRAGTVEDLRRFGEEMGFGVT-VAEILEHEGGQVSSTAIREALTDGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---DQTS 237
           +AA  LG+   IE  VI GE+ GR LG+PT NM +      K GVYA+         +  
Sbjct: 177 DAAAQLGHWHRIEGTVIGGEQRGRELGYPTTNMSIDGLHPPKLGVYAVLVEVLTGEHKGH 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    N P  LE+FIFDF  ++YG   ++   +YLRPE+KF  +E L   
Sbjct: 237 YHGAASIGVRPMFGENRP-NLETFIFDFKGDLYGATLSIGLVEYLRPELKFDSLEALIEQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR ILE+
Sbjct: 296 MDADCARARDILEA 309


>gi|56460237|ref|YP_155518.1| FAD synthase [Idiomarina loihiensis L2TR]
 gi|56179247|gb|AAV81969.1| FAD synthase [Idiomarina loihiensis L2TR]
          Length = 312

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +        +L     G V+ IGNFDG+HLGH  +L Q  + A     P  V++F P 
Sbjct: 1   MELIRG---THNLRAEHCGCVLTIGNFDGVHLGHQAVLSQVREKAQQLGMPSAVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ + Q       L+    +   L+       I  +F  + A+  A +FI++ LV  L V
Sbjct: 58  PQELFQPEKAPARLTNWREKYLALQAQNVDRHIVVEFNKKFASQPAREFIEQTLVGKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQK G++ GF  V     R  + Q VSS+ IR AL +G 
Sbjct: 118 KFLVVGDDFRFGYKREGDFELLQKAGKELGFEVVDTRSYRQ-QQQRVSSTAIRQALEEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTS 237
              A  +LG  + I   V+HG K GRT+GFPTAN+ L        GV+A+  +  +D+  
Sbjct: 177 FEQAEQMLGRPYQICGKVVHGRKNGRTIGFPTANVPLKRLKSPLHGVFAVTAQFGKDEEI 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +SGVAN G  PT+  +  + LE  +F+FS  +YGQ+ TV+    LR E +F  ++ L+  
Sbjct: 237 HSGVANLGTRPTLNGD-EVQLEVHLFEFSGNLYGQQMTVTPVAKLRNEQRFASLQHLQEQ 295

Query: 298 MGEDEKKARKILE 310
           + +D  +AR+ L 
Sbjct: 296 IEKDAARAREALA 308


>gi|262274902|ref|ZP_06052713.1| riboflavin kinase/FMN adenylyltransferase [Grimontia hollisae CIP
           101886]
 gi|262221465|gb|EEY72779.1| riboflavin kinase/FMN adenylyltransferase [Grimontia hollisae CIP
           101886]
          Length = 313

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 105/313 (33%), Positives = 156/313 (49%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +  +G V+ IGNFDG+HLGH  +L + ++ A     P TV+ F P 
Sbjct: 1   MELIRGI---HNIRDRHRGCVLTIGNFDGVHLGHQEVLRRVVEKAGELGLPPTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +         L+    +   L K+G   L+   F  + A  +   F+ ++L E L V
Sbjct: 58  PRELFAGEKAPARLTRLRDKYVQLAKLGVERLVMVNFNAKFAAITPHDFVHRLLAEQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD   LQ +    GF  V  D    ++ Q VSS+ IR  L  G 
Sbjct: 118 KFLVVGDDFRFGARRQGDFSYLQSQAVLAGFEVVSTDSFTVSE-QRVSSTAIREVLAAGQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF-RTQDQTS 237
              A  +LG  ++I   V HG+K+GRT+GFPTAN+ L   +    GVY +R    +    
Sbjct: 177 QYEAEQMLGRPYSISGRVSHGKKLGRTIGFPTANVPLKRRVSPVSGVYVVRVGGIESGQW 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G  PT+       LE  +FD  +++YG++  V     LR E+KF  +++LK  
Sbjct: 237 LGGVANVGTRPTVNGV-RQQLEVHLFDLEKDLYGRQIEVQLLHKLRDEMKFSSLDELKAQ 295

Query: 298 MGEDEKKARKILE 310
           +  D + AR  L 
Sbjct: 296 IEIDAQTARAWLA 308


>gi|304309974|ref|YP_003809572.1| Riboflavin kinase / FAD synthetase [gamma proteobacterium HdN1]
 gi|301795707|emb|CBL43906.1| Riboflavin kinase / FAD synthetase [gamma proteobacterium HdN1]
          Length = 316

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 105/312 (33%), Positives = 153/312 (49%), Gaps = 4/312 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +      P+  +  V  +GNFDG+HLGH  I++Q  +       P  V+ F P 
Sbjct: 1   MEIIRGLHNLGPQPHSTQACVATVGNFDGVHLGHAAIIQQLKEHGARLGVPSCVMVFEPQ 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + +IL +MG   L+  +F  +    SA +F ++VLV  L V
Sbjct: 61  PREFFAPQTAPARLTTLREKAEILAEMGVDQLLCVRFDRKFCALSAAEFCERVLVGGLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG DR GD   L++ G  +GF           + + VSS+ IR AL  G 
Sbjct: 121 QHLVVGDDFRFGHDRVGDFHFLEQAGATFGFGVEATRTF-ALEGERVSSTRIREALAAGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  F     V HG+K+GRTLG PTAN+  +       GVYA+     D    
Sbjct: 180 FAAAQHLLGRPFGFSGRVAHGDKLGRTLGVPTANLWPNRLKSPLHGVYAVWADLGDGARR 239

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+       LE+ + DF  ++YG+R  V F   +R E KF  +E+LK  +
Sbjct: 240 PAVASIGARPTV-GGTRWRLETHLLDFQGDLYGRRMRVEFITRIRDEKKFSGLEELKANI 298

Query: 299 GEDEKKARKILE 310
             D + AR+I  
Sbjct: 299 DNDIQIAREIFS 310


>gi|206579962|ref|YP_002240527.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae 342]
 gi|288937225|ref|YP_003441284.1| riboflavin biosynthesis protein RibF [Klebsiella variicola At-22]
 gi|290512630|ref|ZP_06551996.1| riboflavin biosynthesis protein RibF [Klebsiella sp. 1_1_55]
 gi|206569020|gb|ACI10796.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae 342]
 gi|288891934|gb|ADC60252.1| riboflavin biosynthesis protein RibF [Klebsiella variicola At-22]
 gi|289774971|gb|EFD82973.1| riboflavin biosynthesis protein RibF [Klebsiella sp. 1_1_55]
          Length = 312

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L++  +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHQALLQRLREEGRQRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  +F    A  +A+ FI ++LV  L V
Sbjct: 58  PLELFAADKAPARLTRLREKLGYLAESGVDYVLCVRFDRRFAALTAQDFISELLVRRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL    
Sbjct: 118 QFLAVGDDFRFGAGRQGDFLLLQKAGAEYGFDVTSTQTFCE-GGVRISSTAVRQALADDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +L A  LLG+ F+I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LLLAETLLGHPFSISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 AGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHINVVLRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  AR++ 
Sbjct: 296 ARDELTARELF 306


>gi|71735847|ref|YP_273012.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71556400|gb|AAZ35611.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 344

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 37  MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 93

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 94  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 153

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 154 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 212

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 213 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKTW 271

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 272 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 331

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 332 NADVAAARA 340


>gi|152968601|ref|YP_001333710.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893006|ref|YP_002917740.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262044936|ref|ZP_06017978.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330009359|ref|ZP_08306516.1| riboflavin biosynthesis protein RibF [Klebsiella sp. MS 92-3]
 gi|150953450|gb|ABR75480.1| hypothetical protein KPN_00020 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238545322|dbj|BAH61673.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|238774009|dbj|BAH66506.1| conserved hypothetical protein [Klebsiella pneumoniae NTUH-K2044]
 gi|259037663|gb|EEW38892.1| riboflavin biosynthesis protein RibF [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534822|gb|EGF61368.1| riboflavin biosynthesis protein RibF [Klebsiella sp. MS 92-3]
          Length = 312

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L++  +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHQALLQRLREEGRQRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  +F    A  +A+ FI ++LV  L V
Sbjct: 58  PLELFAADKAPARLTRLREKLGYLAESGVDYVLCVRFDRRFAALTAQDFISELLVRRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQK G +YGF               +SS+ +R AL    
Sbjct: 118 QFLAVGDDFRFGAGRQGDFLLLQKAGAEYGFDVTSTQTFCE-GGVRISSTAVRQALADDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +L A  LLG+ F+I   V+HG+++GRT+GFPTAN+ L   +   +GVYA+          
Sbjct: 177 LLLAETLLGHPFSISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+       LE  + D   ++YG+   V     +R E +F  +++LK  +
Sbjct: 237 AGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHINVILRKKIRNEQRFASLDELKAQI 295

Query: 299 GEDEKKARKIL 309
             DE  AR++ 
Sbjct: 296 ARDELTARELF 306


>gi|304396520|ref|ZP_07378401.1| riboflavin biosynthesis protein RibF [Pantoea sp. aB]
 gi|304356029|gb|EFM20395.1| riboflavin biosynthesis protein RibF [Pantoea sp. aB]
          Length = 309

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L    +G V+ IGNFDG+H GH  +L +  +  +  + P+ V+ F P 
Sbjct: 1   MKFIRGI---HNLNEQHRGCVLTIGNFDGVHRGHQALLSRLCEEGLKRHLPVVVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + + + + G   ++  +F    A  SA++FI  +LV+ L+V
Sbjct: 58  PLELFAGDKAPARLTRLREKLRYMAEAGVDKVLCVRFDRRFAALSAQRFISDLLVDKLDV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG  R GD  +LQK G +YGF  V  +   +   + +SS+ +R AL    
Sbjct: 118 KYLAVGDDFRFGAGRQGDFLLLQKAGVEYGFEVVSTETFCD-GGKRISSTAVRQALAADD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ FTI   V+HG+ +GRTLGFPTAN+ L   +   +GVYA+  +       
Sbjct: 177 LALAQSLLGHPFTISGRVVHGDALGRTLGFPTANLPLRRSVTPVKGVYAVEVQGLTPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +E LK  +
Sbjct: 237 PGVANIGTRPTV-KGLRQQLEVHLLDINIDLYGRHIDVVLKQKIRNEQRFASLEALKEQI 295

Query: 299 GEDEKKARKIL 309
             D   AR+  
Sbjct: 296 ANDVVTARQFF 306


>gi|161612366|ref|YP_001586331.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|205351388|ref|YP_002225189.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|161361730|gb|ABX65498.1| hypothetical protein SPAB_00055 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205271169|emb|CAR35956.1| riboflavin biosynthesis protein RibF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|321222385|gb|EFX47457.1| Riboflavin kinase / FMN adenylyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
          Length = 295

 Score =  342 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 4/290 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD  +
Sbjct: 62  HYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL + ++  A  LLG+ FTI   V+HG
Sbjct: 122 LQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK  
Sbjct: 240 VHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARKFF 289


>gi|296117461|ref|ZP_06836048.1| riboflavin biosynthesis protein RibF [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295975982|gb|EFG82773.1| riboflavin biosynthesis protein RibF [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 313

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 105/305 (34%), Positives = 149/305 (48%), Gaps = 1/305 (0%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H     + +P   +G V A+GNFDG+HLGH  +L           + V++F PHPR + +
Sbjct: 4   HLHTDWRDIPAAARGTVAALGNFDGVHLGHAHLLRTLRAARPEGELAVVTFEPHPRELFR 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
              P F L+ P  +   L  +G   + +  FT E +  SAE+F+  VL   L V+ V  G
Sbjct: 64  PQDPPFRLTLPDERFSALVALGVRHVFQIPFTPEFSAMSAEEFVTGVLHAGLGVRHVACG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG  R GD   L +     G     +  L +      SS+ IR  L +G+   AA 
Sbjct: 124 ADFAFGHRRRGDVAFLAQEAHDLGIGLTVVPALCDAAGPY-SSTRIRRLLQEGYPERAAD 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG  ++I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D     GVAN 
Sbjct: 183 ELGRAWSIRGQVEHGDKRGRLLGFPTANIALGRHLEPARGVYAVSVRMGDGRVCPGVANI 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT+       LE  + DF  ++YGQ  +V+    LR E +F  ++ L+  +  D + 
Sbjct: 243 GRRPTINDGQVSRLEVHLLDFDGDLYGQTLSVALHTLLREERRFDGLDALRAQIARDTQA 302

Query: 305 ARKIL 309
           AR  L
Sbjct: 303 ARDYL 307


>gi|296101199|ref|YP_003611345.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295055658|gb|ADF60396.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 291

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 4/290 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   K   A   P+ V+ F P P  +         L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLELFAGDKSPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ F+  +LV+ L V+ +  G  FRFG  R GD  +
Sbjct: 62  RYLAQSGVDYVLCVRFDRRFAALTAQNFVSDLLVKRLGVQFLAVGDDFRFGAGRQGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               VSS+ +R AL    +  A +LLG+ FTI   V+HG
Sbjct: 122 LQKAGLEYGFDVTSAMTFCE-GGVRVSSTAVRQALANDELETAENLLGHPFTISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +GRT+GFPTAN+ L   +   +GVYA+      +  + GVAN G  PT+       LE
Sbjct: 181 DALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPFYGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+  
Sbjct: 240 VHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTAREFF 289


>gi|256830735|ref|YP_003159463.1| riboflavin biosynthesis protein RibF [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579911|gb|ACU91047.1| riboflavin biosynthesis protein RibF [Desulfomicrobium baculatum
           DSM 4028]
          Length = 314

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 6/309 (1%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTI 62
           H +     +    KG  V IGNFDG+H+GH  ++ +   +A     P  V++F PHP   
Sbjct: 2   HCVTWPDQISGLEKGSCVTIGNFDGVHIGHQRLIARVRDLAAGFGLPSVVITFEPHPLRF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + +++  +G   L+  +F    A+ S E F++++LVE L +K ++
Sbjct: 62  FTGKKTPPFITLYEQRAELIRSLGIDHLLCLEFNQALASMSPEDFVRRILVEGLHIKELV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  + FGK R G+  +L + G+++ F    ++ +  +++ IVSS+ IR  +  G V  A
Sbjct: 122 IGYDYAFGKGRRGNYALLSQLGKQWAFGVEQLEPVMVDQA-IVSSTRIRDLVEAGDVWAA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
             LLG  + +   V+HG+  G   LGFPTAN+ L  ++  K GVY       D   +  V
Sbjct: 181 KPLLGRFYRVTGTVVHGQNRGGRLLGFPTANVHLVDELFPKTGVYCCWAE-LDGEIHQAV 239

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G NPT   N  L +E  + DFS ++Y +   V F   LR E KF  +++LK  +G+D
Sbjct: 240 ANIGYNPTF-GNDVLSVEVHVMDFSADLYERTLKVHFVQRLRGERKFSGLDELKAQIGKD 298

Query: 302 EKKARKILE 310
              AR IL 
Sbjct: 299 VALARTILA 307


>gi|91794075|ref|YP_563726.1| riboflavin biosynthesis protein RibF [Shewanella denitrificans
           OS217]
 gi|91716077|gb|ABE56003.1| FMN adenylyltransferase / riboflavin kinase [Shewanella
           denitrificans OS217]
          Length = 311

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 167/314 (53%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I  +  LP+H  G V+ IGNFDG+H GH  ++   +  A+    P T+++F P 
Sbjct: 1   MELIRGI--HNILPSHH-GCVLTIGNFDGVHRGHGQVIGNLVSKAHHFQLPATLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P      ++    LS    + ++L+++    L+   FT   A+ +AE FI+ +LV+ L V
Sbjct: 58  PMERFLGANAPARLSLLRDKVRLLDELEVDRLLCVNFTHAFASQTAETFIEDLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L   G+K+GF  V         S  VSS+ +R  L  G+
Sbjct: 118 KYLVVGDDFCFGKGRLGNFDMLLNAGKKHGFTVVSTQSFM-LGSHRVSSTAVREQLAAGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F +   V HG+KIGRT+GFPTAN+ +  +++   GV+A+R   Q   SY
Sbjct: 177 LEQARRLLGHPFILSGRVAHGKKIGRTIGFPTANIAMKRNVVPVRGVFAVRINWQGSDSY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDF  ++YG+   V     +R E  F+ ++ LK  +
Sbjct: 237 EGVANVGFRPTVQ-GQTCQLEVHLFDFDGDLYGKHVEVELVAKIREEQPFESLDALKQQI 295

Query: 299 GEDEKKARKILESS 312
             D  +AR +  + 
Sbjct: 296 LNDANQARALFGND 309


>gi|257487503|ref|ZP_05641544.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289625176|ref|ZP_06458130.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289651360|ref|ZP_06482703.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|320326229|gb|EFW82283.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320330653|gb|EFW86630.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330869172|gb|EGH03881.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330881362|gb|EGH15511.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330988786|gb|EGH86889.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331008750|gb|EGH88806.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 308

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKTW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|23016354|ref|ZP_00056111.1| COG0196: FAD synthase [Magnetospirillum magnetotacticum MS-1]
          Length = 333

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 108/316 (34%), Positives = 169/316 (53%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  +      L    +G VVA+GNFDG+HLGH  ++  A ++A    +   V++F PH
Sbjct: 1   MRLIRHC---GELSPDHRGCVVALGNFDGVHLGHQAVILTARRMAQELGVAHAVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+       F L+P  ++ +++E +G   L +  F  + A  +A +F+  VLV  L+V
Sbjct: 58  PRTLFNPDQAAFRLTPFRVKARLIEALGTDFLYQQHFDRDFAAMTALEFVGDVLVGCLKV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  + FGK R G    LQK GE+ GF    +     +  +  SS+ +R  L  G 
Sbjct: 118 SHVVVGYDYVFGKGRLGTGAFLQKCGEESGFGVTVVPPAMADHGETYSSTAVREHLVAGR 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
              AA LLG+ + +E  V HG+  GR LGFPTAN++L        GVYA+R    +    
Sbjct: 178 PDCAARLLGHYWEVEGRVEHGDARGRLLGFPTANLRLGEYQRPAGGVYAVRAGIDKGGAT 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + GVANFGR PT      L+ E  + DF++++YG+   V+  +++RPE KF  +++L 
Sbjct: 238 VWHDGVANFGRRPTFDKTDELM-EVHLLDFNEDLYGRHLRVALVEHIRPERKFGGLDELT 296

Query: 296 IYMGEDEKKARKILES 311
             +  D +  R+IL +
Sbjct: 297 HQITADVEAGRRILAA 312


>gi|126725855|ref|ZP_01741697.1| Riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF
           [Rhodobacterales bacterium HTCC2150]
 gi|126705059|gb|EBA04150.1| Riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF
           [Rhodobacterales bacterium HTCC2150]
          Length = 312

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 117/317 (36%), Positives = 171/317 (53%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +F +      LP   KGG   IGNFDG+H GH  +L+ A K A ++  P+ VL+F+PH
Sbjct: 1   MQIFTHWN---DLPASAKGGSAVIGNFDGVHRGHQAVLDIARKRAKDNDIPLGVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     +   L K+G   L +  F    ++++A +F + V+ E L +
Sbjct: 58  PRQFFAPDAPEFRLMNNEAKANRLAKLGVDYLYQLPFDKIMSSFTAREFAKTVIAEGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  F FGK R G    L   G ++GF       L+ + S  +SS++IR AL +G 
Sbjct: 118 SHIVIGADFCFGKGRLGTAQDLVDFGTQFGFDVTIAPLLKAD-SDYISSTSIRRALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
              A+ +LG+   IE +VIHGEK GR LGFPTANM +    L K GVYA+     D   Q
Sbjct: 177 PAIASDMLGHWHRIEGEVIHGEKRGRELGFPTANMSVKGLHLPKFGVYAVFATILDGPYQ 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P    N P  LE+++FDF  ++YG   +++  +YLR E KF  ++ L 
Sbjct: 237 GVYQGAASLGIRPMFGENTP-NLETYLFDFDGDLYGTHISIALVEYLRGEEKFDGLDALI 295

Query: 296 IYMGEDEKKARKILESS 312
             M  D  +ARK+L ++
Sbjct: 296 DQMTLDCDRARKVLANA 312


>gi|329903781|ref|ZP_08273613.1| Riboflavin kinase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548212|gb|EGF32914.1| Riboflavin kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 325

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 163/330 (49%), Gaps = 14/330 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF  +              + IGNFDG+HLGH  +L +  + A    +   V++F PH
Sbjct: 1   MKVFRGL----PNAAARAPCALTIGNFDGVHLGHQSLLARVSEAAGKLGLDSAVMTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR          +     ++    + + L + G   +I   F    A  + + FI+ +LV
Sbjct: 57  PREYFARVQGDPAKAPARIANLRDKLRSLHQAGIDRVIVQHFNAHFAALTPDDFIRHILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L VK ++ G  F FG  RAG+  +L + G++YGFH   +  +R +    +SSS IR A
Sbjct: 117 DGLHVKWLMVGEDFCFGARRAGNVALLIEAGQRYGFHVETLPTVR-HDGTRISSSAIRDA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G+   A  +LG+ + +   VIHG+K+GRT+GFPT N+ ++       G+Y ++    
Sbjct: 176 LHAGNFAQAHQMLGHPYAMSGHVIHGKKLGRTIGFPTLNLAVTHKHPALSGIYVVQVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                 GVA+ G  PT+  +G +LLE+ +FDF+   YG+   + F   LR E K+ D+  
Sbjct: 236 ADQPLPGVASIGVRPTVDDSGRVLLETHVFDFAANCYGKLIRIEFLKKLRSEEKYTDLPS 295

Query: 294 LKIYMGEDEKKARKIL--ESSYPLSERDRI 321
           L   +  D   AR      S+  LS  DRI
Sbjct: 296 LTAAIANDASNARDYFRDASAVALSATDRI 325


>gi|83859464|ref|ZP_00952985.1| Riboflavin kinase [Oceanicaulis alexandrii HTCC2633]
 gi|83852911|gb|EAP90764.1| Riboflavin kinase [Oceanicaulis alexandrii HTCC2633]
          Length = 310

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 121/312 (38%), Positives = 170/312 (54%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+H       LP   +G V A+GNFDG+H GH  ++E A   A   ++P     F PH
Sbjct: 1   MAVYHGY---SDLPELSRGCVAALGNFDGVHRGHRAVIETACAFAKSLDAPCAAAVFAPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    +P F L   S + + L+  G  A+    F+ + A  + E F++ VL + L +
Sbjct: 58  PRQVFAPDAPPFLLMSDSQRVRALKAAGAEAVFHIPFSRDMAAMTPEVFVRDVLADGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKG 177
           K V+TG  F FGKDRAGD   L+  GE+YG      D +   + S  +SS+N+R AL +G
Sbjct: 118 KGVVTGADFCFGKDRAGDAEALKTLGERYGVAVKIADAVNLEDASGKISSTNVRNALREG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  AA LL   F IE +V  G++ GR LGFPTAN+ L   +  K GVYA+R       +
Sbjct: 178 DVKTAAALLDRPFAIEGEVSQGDQRGRLLGFPTANIALGEYLRPKFGVYAVRAHLPSGRT 237

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G  PT+       LE+ +FDFS ++YGQ   V   D++RPE KF  ++ LK  
Sbjct: 238 VPGVANLGSRPTVN-GTEARLEAHLFDFSGDLYGQVLEVELIDFIRPEQKFDGLDALKAQ 296

Query: 298 MGEDEKKARKIL 309
           +  D   AR++L
Sbjct: 297 IAADSATARQML 308


>gi|85058391|ref|YP_454093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Sodalis
           glossinidius str. 'morsitans']
 gi|84778911|dbj|BAE73688.1| riboflavin biosynthesis protein [Sodalis glossinidius str.
           'morsitans']
          Length = 312

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG H GH  ++   QA       P+ V+ F P 
Sbjct: 1   MELIRGI---HNLQPRHHGCVLTIGNFDGFHRGHQALIAELQAEGRRRGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+      +    L+    + K L   G  A +   F    A  SA  F+  +LV+ L V
Sbjct: 58  PQEHFAGDAAPARLTRLRDKVKYLAAAGVDATVCVTFDKRFAALSARAFVTDLLVKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD  +LQ+ G++ GF  +          + +SS+ +R  L +  
Sbjct: 118 RFIGVGDDFRFGAWRQGDFALLQQAGKEAGFEVMSTVTY-TEGGRRISSTAVRETLAQDR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + +   V+HG+ +G+T+GFPTAN+ L        GVYA+      +   
Sbjct: 177 LSEAEMLLGHPYRLSGRVVHGDALGQTIGFPTANVSLKGRQAPINGVYAVEVHGLAERPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D  + +YG+   V     +R E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVA-GLRQRLEVHLLDVDKNLYGRHIEVVIRAKVRNEQRFASLDDLKRQI 295

Query: 299 GEDEKKARKILESSYP 314
             D   AR     + P
Sbjct: 296 ANDVVSARDYFGLATP 311


>gi|238918621|ref|YP_002932135.1| riboflavin biosynthesis protein RibF, [Edwardsiella ictaluri
           93-146]
 gi|238868189|gb|ACR67900.1| riboflavin biosynthesis protein RibF, putative [Edwardsiella
           ictaluri 93-146]
          Length = 331

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        +L    +G V+ IGNFDG+H GH  +L +  +  +    P+ V+ F P 
Sbjct: 1   MELIRG---THNLRARHRGCVLTIGNFDGVHRGHRALLARLRQEGDRLGVPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    L+    + + L   G  A++   F  + A++SA+ F++ +LVE L V
Sbjct: 58  PLEMFAPQNAPARLTRLRDKCRYLADAGVDAVLCVGFDRQFASHSAQDFVKHLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQ  G+ YGF             + VSS+ +R AL    
Sbjct: 118 KFLMIGDDFRFGAGREGDYQMLQAAGKVYGFTVTNSLSFCVGD-RRVSSTAVRHALRHDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LALAESLLGHPYRIAGRVVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGI-RQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQI 295

Query: 299 GEDEKKARKIL 309
            +D   AR+  
Sbjct: 296 AQDVVAAREFF 306


>gi|66043974|ref|YP_233815.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae B728a]
 gi|63254681|gb|AAY35777.1| Riboflavin kinase / FAD synthetase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 314

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 7   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 64  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 124 QHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 183 FALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDI-DGKTW 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 242 PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 301

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 302 NADVAAARA 310


>gi|91776561|ref|YP_546317.1| riboflavin kinase / FMN adenylyltransferase [Methylobacillus
           flagellatus KT]
 gi|91710548|gb|ABE50476.1| riboflavin kinase / FMN adenylyltransferase [Methylobacillus
           flagellatus KT]
          Length = 306

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 158/315 (50%), Gaps = 13/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF +       P       VAIGNFDG+HLGH  +L + I++A        V++F PH
Sbjct: 1   MQVFRHFHQAAHHPL-----AVAIGNFDGVHLGHQALLRRLIEVASAQGLKSAVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++  + G   +    F    A  + E F+Q +L   L+ 
Sbjct: 56  PREFFAPDKAPARLTSLREKLELFAEAGVDYVYVCHFNRRFAAITVEAFMQDILRNALDA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G  FRFG  R G          + GF+        N   + VSS+ IR AL KG 
Sbjct: 116 RTILVGEDFRFGAGRQGSMED----FARAGFNLQS-QPQVNLDGKRVSSTAIREALAKGQ 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTS 237
           +  AA LLG  ++I   V+HG+K+ R LG+PTAN+ +  D     G+YA++     +   
Sbjct: 171 LDEAARLLGRPYSISGKVVHGDKLARELGYPTANIHMLHDRPPLFGIYAVKLEGLAEGGD 230

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GVA+ G  PT+  +G   LE+ +FDFS +IYG+   V F   +R E+KF  +E LK +
Sbjct: 231 WPGVASLGVRPTVKQDGKPTLEAHLFDFSGDIYGRHVRVKFMHKIRDEMKFDSLETLKYW 290

Query: 298 MGEDEKKARKILESS 312
           +  D + AR+   ++
Sbjct: 291 IARDAEMAREYFRAN 305


>gi|301024768|ref|ZP_07188406.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 196-1]
 gi|299880258|gb|EFI88469.1| riboflavin biosynthesis protein RibF [Escherichia coli MS 196-1]
 gi|320179582|gb|EFW54531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           boydii ATCC 9905]
 gi|320190456|gb|EFW65106.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. EC1212]
 gi|320197534|gb|EFW72148.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli WV_060327]
 gi|320200459|gb|EFW75045.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli EC4100B]
 gi|323166069|gb|EFZ51848.1| riboflavin biosynthesis protein RibF [Shigella sonnei 53G]
 gi|326345259|gb|EGD69002.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Escherichia
           coli O157:H7 str. 1125]
 gi|332095310|gb|EGJ00333.1| riboflavin biosynthesis protein RibF [Shigella boydii 5216-82]
 gi|332098327|gb|EGJ03300.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 155-74]
 gi|332341355|gb|AEE54689.1| riboflavin biosynthesis protein RibF [Escherichia coli UMNK88]
 gi|333009408|gb|EGK28864.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-218]
 gi|333010516|gb|EGK29949.1| riboflavin biosynthesis protein RibF [Shigella flexneri VA-6]
 gi|333022391|gb|EGK41629.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-304]
          Length = 295

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|152979534|ref|YP_001345163.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Actinobacillus succinogenes 130Z]
 gi|150841257|gb|ABR75228.1| riboflavin biosynthesis protein RibF [Actinobacillus succinogenes
           130Z]
          Length = 317

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 14/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L  + +   + IGNFDG+HLGH  +L    + A+  N P+ V+ F P 
Sbjct: 1   MQLIRGMR---NLQQNFEHCALTIGNFDGVHLGHQAVLRHLREKADSLNLPVVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q       L     +   L++ G   +I  KF    A  +AE+FI + LV  L V
Sbjct: 58  PREYFQGERAPARLMRLRDKLHYLDEAGVDFVICVKFDRTFATLTAEEFICQWLVRKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFG +R GD  +LQ+ G K+GF             Q +SS+ IRTAL   +
Sbjct: 118 SFLSIGDDFRFGANREGDFTLLQQSGSKFGFTVEDNSTFH-LCEQRISSTAIRTALADDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
           +  A  LLG  + I   V+HG+K+GRT+GFPTAN++L   +   +GVYA++ R +     
Sbjct: 177 LALAESLLGRPYRIFGKVVHGKKLGRTIGFPTANIRLQRQVNPVKGVYAVKVRCEADVRG 236

Query: 238 ------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 + G+AN G+ PT+      LLE  +FDF+ ++YGQ  +V F   +R E+KF  +
Sbjct: 237 EKCGRIFEGIANIGQRPTVDGVKQ-LLEVHLFDFNSDLYGQTISVEFCKKIRNEVKFPSL 295

Query: 292 EKLKIYMGEDEKKARKILESS 312
           + L+  + +D   A+   + +
Sbjct: 296 DALQAQIRQDALTAKDYFKQN 316


>gi|332141928|ref|YP_004427666.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551950|gb|AEA98668.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 306

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 113/312 (36%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M     +    ++  H KG V+ IG FDG+H GH  +L   ++ A +   P TV+ F P 
Sbjct: 1   MEFIRGLN---NVKPHHKGCVLTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         +SP   + ++L + G   L+  +F  + A  SA+ F+  +LV+ L V
Sbjct: 58  PEEVFMPDKAPARISPLREKYELLRQQGVDRLLAVRFNAQFAQQSADTFVHDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQ  GE+YGF  V       + +  +SS+ +R AL  G 
Sbjct: 118 KFLVVGDDFRFGHGRKGDFKMLQAAGEQYGFDVVSTHSFTMH-AHRISSTAVREALADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HGEK GRT+GFPTAN+ L        GV+A+R    D   +
Sbjct: 177 FGLATEMLGRPFAIHGRVVHGEKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHF 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+       LE  IFD S ++YG+  TV     +R EIKF   E LK  +
Sbjct: 236 NGVANIGTRPTLNGVRN-QLEVHIFDLSSDLYGKPITVFPMAKIRDEIKFASFEALKDQI 294

Query: 299 GEDEKKARKILE 310
             D  KAR +L 
Sbjct: 295 QADATKARLLLA 306


>gi|87201272|ref|YP_498529.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136953|gb|ABD27695.1| FMN adenylyltransferase [Novosphingobium aromaticivorans DSM 12444]
          Length = 307

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 112/307 (36%), Positives = 168/307 (54%), Gaps = 4/307 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
            ++  + +P+ L+G +VA+GNFDG HLGH  ++ +AI+ A     P+ V +F+PHP    
Sbjct: 3   RLDSLKPVPDSLRGAIVALGNFDGFHLGHQAVVGEAIRWARAEGRPVVVATFDPHPVRYF 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +P F L+    ++++    G  A++   F  E A  SA  +I++ LV  L    V+T
Sbjct: 63  APDAPPFRLTTLDQRQELFAAAGADAMLVIHFGAEVAGMSALAWIEQGLVGHLGAVGVVT 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FGK R+G+  +L + G ++G     +  +   + ++VSSS IR AL  G    AA
Sbjct: 123 GEDFTFGKGRSGNAQVLSQEGPRFGLVARAVGPV-TLEGEVVSSSRIRDALKAGDCETAA 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   F I   V HG+K+GRT+ FPTAN+ +   +  + G+YA+  R  D     G AN
Sbjct: 182 RLLTRPFAIRGAVQHGDKLGRTINFPTANLDIGNYLRPRYGIYAVTGRLPDGRVVKGAAN 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT  P    LLE   FDFS ++YGQ   V+F  +LRPE KF  ++ L   M  D  
Sbjct: 242 IGIRPTFDPPKE-LLEPHFFDFSGDLYGQEIEVAFHHFLRPEAKFDGLDALVAQMERDCD 300

Query: 304 KARKILE 310
           +AR++L 
Sbjct: 301 EARRLLA 307


>gi|309787321|ref|ZP_07681933.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1617]
 gi|308924899|gb|EFP70394.1| riboflavin biosynthesis protein RibF [Shigella dysenteriae 1617]
          Length = 295

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++   F    A  +A+ FI  +LV+ L VK +  G  FRFG  R G+  +
Sbjct: 62  RYLAECGVDYVLCVHFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGNFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|330971960|gb|EGH72026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 308

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQIVGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|307824799|ref|ZP_07655022.1| riboflavin biosynthesis protein RibF [Methylobacter tundripaludum
           SV96]
 gi|307734157|gb|EFO05011.1| riboflavin biosynthesis protein RibF [Methylobacter tundripaludum
           SV96]
          Length = 327

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 170/318 (53%), Gaps = 6/318 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +   + L N   G V+ IGNFDG+HLGH  ++++  +     + P+ V++F P 
Sbjct: 1   MRLIRGLSHLEPLKN---GCVLTIGNFDGLHLGHRAVIKKLAERGAALDLPVIVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       +    L     +     K+    L+  +F    A+  AEQFI+ VLV+ L +
Sbjct: 58  PLEYFLGENAPSRLMRLREKVIQFSKLPVDDLLILRFNQYFADCDAEQFIEDVLVKKLNI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L+ +G+ +GF        +      VSS+ IR AL +G+
Sbjct: 118 KHLVVGDDFHFGKARRGNFAMLKDKGKLFGFDVEDTGSYQVT-GLRVSSTLIRDALGEGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  +++   V HG+K GRT+G+PTAN+Q+        GV+A+     D   +
Sbjct: 177 LALAEKLLGCCYSVCGRVAHGDKRGRTIGYPTANIQMFRKNTPVNGVFAVTMTGIDGCEF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+     ++LE+ +FDF +EIYG+   V F   +R E++F+ +++LK+ +
Sbjct: 237 DGVANVGTRPTVDGGSKVILEAHLFDFDREIYGRYVEVHFKQKIRDEMRFQSLDELKVQI 296

Query: 299 GEDEKKARKILESSYPLS 316
            +D  +A+  L S +  S
Sbjct: 297 VKDVAEAKAALSSLHACS 314


>gi|237801849|ref|ZP_04590310.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331024707|gb|EGI04763.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 316

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 149/309 (48%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFAFLQQAGTTYGFTVEAAQTVEID-GVRVSSTKVRKALAVAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  S+
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-DGKSW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  P++  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPSVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|294634954|ref|ZP_06713472.1| riboflavin biosynthesis protein RibF [Edwardsiella tarda ATCC
           23685]
 gi|291091663|gb|EFE24224.1| riboflavin biosynthesis protein RibF [Edwardsiella tarda ATCC
           23685]
          Length = 320

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 155/320 (48%), Gaps = 7/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GH  +L +  +       P+ V+ F P 
Sbjct: 1   MELIRGI---HNLRARHRGCVLTIGNFDGVHQGHRALLARLRQEGERLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    L+    + + L   G  A++  +F  + A +SA  F++ +LV+ L V
Sbjct: 58  PLEMFAPQNAPARLTRLRDKCRYLADAGVDAVLCVRFDRQFAAHSAHYFVKHLLVDRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQ  G  YGF             + VSS+ +R AL    
Sbjct: 118 KFLMIGDDFRFGAGREGDYRLLQAAGRTYGFTVANSLSFCVGDLR-VSSTAVRQALRHDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   V+HG+ +GRT+GFPTAN+ L   +   +GVYA+       T  
Sbjct: 177 LTLAETLLGHPYRIAGRVVHGDALGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + D + ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVAGI-RQQLEVHLLDVTMDLYGRHIDVVLRAKLRNEQRFDSLDALKRQI 295

Query: 299 GEDEKKARKILESSYPLSER 318
            +D   ARK    + P+   
Sbjct: 296 AQDVVAARKFFGLTTPVQSL 315


>gi|308048499|ref|YP_003912065.1| FMN adenylyltransferase ;riboflavin kinase [Ferrimonas balearica
           DSM 9799]
 gi|307630689|gb|ADN74991.1| FMN adenylyltransferase ;riboflavin kinase [Ferrimonas balearica
           DSM 9799]
          Length = 315

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 103/312 (33%), Positives = 168/312 (53%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L +  +  V+ IGNFDG+H GH  ++ + + +A     P TV+ F P 
Sbjct: 1   MELIRGI---HNLADRHRDCVLTIGNFDGVHRGHAAVINRLVSLARQYGVPATVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+   +  +    L+    +   L ++G   ++  +F    A + AE F+Q++LV+ L +
Sbjct: 58  PQEYFRGEAAPARLNLLRDKLDRLAELGVDRVLCVRFDARFAGWEAEDFVQQLLVDKLAI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FG+ R G+   LQ  G K+GF        R  + + +SS+ IR AL  G 
Sbjct: 118 RYLVVGDDFCFGRARRGNFAFLQAAGAKHGFAVEDTASCRLGQER-ISSTLIRNALASGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG+ + I   V HG+K+GRT+GFPTAN+ L   ++   GV+A+R +T+D   +
Sbjct: 177 LASAERMLGHPYQISGRVAHGDKLGRTIGFPTANILLKRTVVPISGVFAVRVQTEDGQWH 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN GR PT+       LE  +FDF+ ++YGQ   V    +LR E  F  +E LK  +
Sbjct: 237 DGVANVGRRPTV-SGQQCRLEVHLFDFNADLYGQHLHVRLHSWLRDEHAFPSLEALKAQI 295

Query: 299 GEDEKKARKILE 310
             D ++A+  L 
Sbjct: 296 RLDAERAQTALR 307


>gi|84499761|ref|ZP_00998049.1| riboflavin biosynthesis protein RibF [Oceanicola batsensis
           HTCC2597]
 gi|84392905|gb|EAQ05116.1| riboflavin biosynthesis protein RibF [Oceanicola batsensis
           HTCC2597]
          Length = 312

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 113/317 (35%), Positives = 169/317 (53%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +  + +         +G  VAIGNFDG+H+GH  +++ A   A     P+ V++F PH
Sbjct: 1   MKIVRDYQFTTP---GDRGAAVAIGNFDGVHIGHRAVIDLARAEARRLHAPLGVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    +P F L+ P+ +   LEK+G   L    F    A  + E F+++VLVE L V
Sbjct: 58  PRQLFAPDAPPFRLTGPAARAHRLEKIGVEILYELNFNPALAGLTPEAFVRRVLVEGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FG  RAG    L+  G++ GF     D L    ++ VSS+ IR AL +G 
Sbjct: 118 RHVVVGADFHFGAKRAGTTETLRAFGQELGFGVTVAD-LVAEGTEEVSSTAIRDALAEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQ 235
             +AA +LG+   IE  VI G++ GR LG+PTANM ++     + GVYA+         +
Sbjct: 177 PRDAAAMLGHWHRIEGPVIRGDQRGRDLGYPTANMSIAGLHRPRFGVYAVLVDVLTGPHR 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +Y G A+ G  P      P  LE+++FDF  ++YG+  +V   +YLRPE KF  ++ L 
Sbjct: 237 GTYRGAASLGMRPQFGGETP-NLETYLFDFQGDLYGETVSVGLVEYLRPEAKFDSLDGLI 295

Query: 296 IYMGEDEKKARKILESS 312
             M  D  +AR IL + 
Sbjct: 296 RQMEADCDRARAILAAQ 312


>gi|326621742|gb|EGE28087.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 295

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 4/290 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +       P+ V+ F P P+ +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQPQELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD  +
Sbjct: 62  HYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL + ++  A  LLG+ FTI   V+HG
Sbjct: 122 LQKAGVEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK  
Sbjct: 240 VHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARKFF 289


>gi|330994143|ref|ZP_08318071.1| Riboflavin biosynthesis protein ribF [Gluconacetobacter sp. SXCC-1]
 gi|329758610|gb|EGG75126.1| Riboflavin biosynthesis protein ribF [Gluconacetobacter sp. SXCC-1]
          Length = 319

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 1/304 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +++P+  +G V A+GNFDG+HLGH  ++           + V++F PHPR + +   P F
Sbjct: 10  RAIPDSARGTVAALGNFDGVHLGHAHLVHALQAARPGRDLAVVTFEPHPRELFRPQDPPF 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    +   L  +G   + + +F  E +  SAE F+ +VL E L +K V  G  F FG
Sbjct: 70  RLTLEQERFAALAALGVQHVFQIRFDHEFSAMSAEDFVTRVLHESLGLKHVACGLDFAFG 129

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R G+   L +R          +  L +      SS+ IR  L  G+   AA  LG  +
Sbjct: 130 HRRRGNVDFLAERTRALDMGLTVVPPLSDGLGPY-SSTRIRRLLQDGYPERAAEELGRPW 188

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D T + GVAN GR PT+
Sbjct: 189 SIRGVVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVSVRLADGTVHPGVANIGRRPTI 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  LE  +  F+ ++YGQ  +V+    LR E +F  ++ LK  +  D ++A   L 
Sbjct: 249 NDGQESRLEVHLLGFAGDLYGQSLSVALHTLLRAERRFDGLDALKAQIARDSEQAAAYLS 308

Query: 311 SSYP 314
           S  P
Sbjct: 309 SRLP 312


>gi|154245787|ref|YP_001416745.1| riboflavin biosynthesis protein RibF [Xanthobacter autotrophicus
           Py2]
 gi|154159872|gb|ABS67088.1| riboflavin biosynthesis protein RibF [Xanthobacter autotrophicus
           Py2]
          Length = 316

 Score =  340 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 120/307 (39%), Positives = 175/307 (57%), Gaps = 5/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQ 64
           +  +  LP  L   VVAIGNFDG+H GH  + +  +A+      P   ++F PHPRT   
Sbjct: 12  VRGHAQLPPALARPVVAIGNFDGVHRGHRAVFDTARAMAAEAGVPAIAVTFEPHPRTFFN 71

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +S  F L+P + + + + + G    +   F  + A   AE F+++VLV    V  V  G
Sbjct: 72  PASAPFRLTPEARKLRHIAESGLQGAVVLPFDAQLAAMEAEDFVREVLVGRYNVTGVSVG 131

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+ RAG    L+  G ++GF    +  +R+     +SS+ IR+AL  G V +AAH
Sbjct: 132 FDFHFGRARAGSPAFLEDAGRRHGFKVTVVPPMRDEDD-AISSTAIRSALASGQVGHAAH 190

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  F + ++VIHG+K GRT+GFPTAN+ L+ D+ L  G+YA+R  T     + GVAN+
Sbjct: 191 MLGRPFAVAAEVIHGDKRGRTIGFPTANLALAEDMDLAFGIYAVRAATP-LGRFDGVANY 249

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT   NG  LLE  +FDFS ++YG    V F  YLRPE+KF  I+ L   +  D ++
Sbjct: 250 GRRPTF-DNGRPLLEVHLFDFSGDLYGATLEVEFHAYLRPELKFDGIDALVAQIAADARQ 308

Query: 305 ARKILES 311
           AR++L  
Sbjct: 309 AREVLAK 315


>gi|332992322|gb|AEF02377.1| riboflavin biosynthesis protein RibF [Alteromonas sp. SN2]
          Length = 306

 Score =  340 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 108/312 (34%), Positives = 157/312 (50%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M     +    ++     G V+ IG FDG+HLGH  +L   ++ A     P TV+ F P 
Sbjct: 1   MEFIRGLN---NVKPQHSGCVLTIGKFDGVHLGHQAVLSNVLQKAKALGLPATVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         +SP   + ++L++ G   L+  +F    A+ SA+ F+  +LV+ L V
Sbjct: 58  PEEVFTPDRAPARISPLREKYELLKQQGVDRLLAVRFNRAFASQSADTFVHDLLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG+ R GD  +LQ  G+KYGF  V       + +  +SS+ +R AL    
Sbjct: 118 KFLVVGDDFRFGQGRKGDFAMLQAAGQKYGFEVVSTQSFMMH-AHRISSTAVREALADSD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
                 +LG  F +   V+HGEK GRT+GFPTAN+ L        GV+A+     D   +
Sbjct: 177 FALGEEMLGRPFAVYGRVVHGEKKGRTIGFPTANVMLKRCRAPIHGVFAVHVAV-DGKKF 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+       LE  IFD S ++YG+  TV     +R E KF   E LK  +
Sbjct: 236 NGVANIGTRPTLNGVRN-QLEVHIFDMSADLYGKPMTVFPVAKIRDEQKFDSFEILKAQI 294

Query: 299 GEDEKKARKILE 310
             D  KAR +LE
Sbjct: 295 QADAAKARLLLE 306


>gi|330954238|gb|EGH54498.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae Cit 7]
          Length = 308

 Score =  340 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|330909871|gb|EGH38381.1| riboflavin kinase / FMN adenylyltransferase [Escherichia coli AA86]
          Length = 295

 Score =  340 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 95/295 (32%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV  L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVRHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|302185238|ref|ZP_07261911.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae 642]
          Length = 308

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 101/309 (32%), Positives = 146/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +         +
Sbjct: 177 FALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEING-KVW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|330977515|gb|EGH77461.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 308

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +   +   VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEI-EGIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|92112613|ref|YP_572541.1| riboflavin kinase / FMN adenylyltransferase [Chromohalobacter
           salexigens DSM 3043]
 gi|91795703|gb|ABE57842.1| FMN adenylyltransferase [Chromohalobacter salexigens DSM 3043]
          Length = 355

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 105/319 (32%), Positives = 157/319 (49%), Gaps = 8/319 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +   +         V  IGNFDG+H GH  IL+Q    A     P+ V+ F P 
Sbjct: 1   MELIRGLHNLR----EAGPCVATIGNFDGVHRGHQAILDQLKSRARALGLPVAVVVFEPQ 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           LS    + ++L   G   ++   F       +A++FI++VL++ L V
Sbjct: 57  PREYFAGQQAPPRLSRLRDKVELLAAHGADRILCLPFNAALRRLTADEFIERVLIQGLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG DRAGD  +LQ+ GE+ GF          +  + VSS+ +RT L  G+
Sbjct: 117 KHLVVGDDFRFGCDRAGDFALLQRVGERRGFGVEHTRTFVLDDER-VSSTRVRTLLASGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA +LG  + +   V+   ++GRT+G PTAN+ L+   L   G+YA   R  D    
Sbjct: 176 FAQAARMLGRPYQLTGRVVADRQLGRTIGVPTANLPLAARPLALRGIYACVTRLPDGREL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G AN G  PT+    P +LE  +FDF  ++YGQR TV     LR E+ F  ++ L   +
Sbjct: 236 TGAANIGWRPTVGSTRP-VLEVHLFDFDGDLYGQRLTVVPCARLRGEVNFAGLDALTRQI 294

Query: 299 GEDEKKARKILESSYPLSE 317
             D  +AR    ++ PL  
Sbjct: 295 HADLAQARHYFRTATPLDA 313


>gi|238755523|ref|ZP_04616862.1| FMN adenylyltransferase [Yersinia ruckeri ATCC 29473]
 gi|238706279|gb|EEP98657.1| FMN adenylyltransferase [Yersinia ruckeri ATCC 29473]
          Length = 295

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHLALLEQLKREGRRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L ++G   L+  KF    A   A+ F+ ++LVE L V+ +  G  FRFG  R GD  +
Sbjct: 62  KYLAQVGVDYLLCVKFDPRFAANMAQTFVVQLLVEKLGVQFLAVGDDFRFGAGRQGDFQL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G ++GF  +  D   +     +SS+ IR AL    +  A  LLG+ ++I   V+HG
Sbjct: 122 LQQAGAEFGFDVISTDSFCD-GGLRISSTAIRQALHDDDLALAETLLGHPYSISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+          SGVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLSAEPLSGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + D + ++YG+   V     LR E +F  ++ LK  +  D   AR       P+
Sbjct: 240 VHLLDVNMDLYGRHIDVVLRAKLRDEQRFASLDALKQQIANDVVTARNFFGLKTPV 295


>gi|251794003|ref|YP_003008735.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Aggregatibacter aphrophilus NJ8700]
 gi|247535402|gb|ACS98648.1| riboflavin biosynthesis protein RibF [Aggregatibacter aphrophilus
           NJ8700]
          Length = 339

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 34/342 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +LP++L+G  + IGNFDG+HLGH  IL    + A+  N P+ V+ F P 
Sbjct: 1   MQLIRGL---GNLPHNLQGCTLTIGNFDGVHLGHQAILRHLRQKADELNLPMAVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   L++ G   +I  KF    A   AEQF++  LV  L V
Sbjct: 58  PREYFLGEKAPARLMRLRDKLHYLKQAGVDIVIVAKFDRTFAGMPAEQFVEDWLVRTLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ+ GEK+GF          ++ + +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGAKRQGNFAMLQQAGEKFGFTVEDNRSFCLDELR-ISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
           +  A  LLG  + I   VIHG ++GRT+GFPTAN++L   +   +GVYA+R    + +S 
Sbjct: 177 LTLAEKLLGRPYRILGRVIHGNQLGRTIGFPTANIRLHRQVNPVKGVYAVRVFIIEPSSI 236

Query: 238 --------------------------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYG 271
                                     ++GVAN G  PT+      LLE+ +FDF  +IYG
Sbjct: 237 IHPSGAVEQADVQNASRFVWLKSGAFFNGVANIGTRPTINGVNQ-LLEAHLFDFQGDIYG 295

Query: 272 QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           Q   V     +R E+KF   + LK  + +D + A+ I ++  
Sbjct: 296 QWLEVELCHKIRNEMKFASFDDLKDQIAKDVETAKNIFKTDR 337


>gi|126728552|ref|ZP_01744368.1| riboflavin biosynthesis protein RibF [Sagittula stellata E-37]
 gi|126711517|gb|EBA10567.1| riboflavin biosynthesis protein RibF [Sagittula stellata E-37]
          Length = 310

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 122/314 (38%), Positives = 170/314 (54%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +  +      +G  VAIGNFDG+HLGH  ++  A + A N+P+ VL+F PHPR
Sbjct: 1   MRIVRDYQYTRP---GDRGASVAIGNFDGVHLGHQAVIGLARQAAPNAPLGVLTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   LEK+G   L +  F    A+ S + F ++VL E L +  
Sbjct: 58  EYFAPDAPSFRLMSAEARAARLEKLGVDMLYQLNFNTAMASLSPQAFARRVLCEGLGLVN 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R G    L   GE+ GF     D L      +VSS+ IR AL++G   
Sbjct: 118 VVVGADFCFGKGRTGTVSDLIAFGEEMGFGVTVAD-LMETDGLVVSSTAIRDALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA LLG+   IE +VI GE+ GR LG+PTANM +      K GVYA+    +D   + S
Sbjct: 177 DAAKLLGHWHRIEGEVIGGEQRGRELGYPTANMSIDGLHPPKFGVYAVLVDVRDGPHRGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+F+FDF+ ++YG   +V   DYLRPE+KF  ++ L   
Sbjct: 237 YHGAASVGVRPMFDGEVP-NIETFLFDFTGDLYGATLSVGLVDYLRPELKFDGLDALITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  KAR ILE+
Sbjct: 296 MDADCVKARTILEA 309


>gi|320157350|ref|YP_004189729.1| riboflavin kinase/FMN adenylyltransferase [Vibrio vulnificus
           MO6-24/O]
 gi|319932662|gb|ADV87526.1| riboflavin kinase / FMN adenylyltransferase [Vibrio vulnificus
           MO6-24/O]
          Length = 293

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 104/292 (35%), Positives = 147/292 (50%), Gaps = 4/292 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+HLGH  +L Q    A     P  V++F P P  +         L+    + 
Sbjct: 1   MTIGNFDGVHLGHQEVLRQVSLRAREMSLPSVVMTFEPQPLELFAKEKAPARLTRLRDKF 60

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L K+    L+   F    A+  A+ FI+ +LVE L VK ++ G  F FGK R G+  +
Sbjct: 61  VQLGKLEIDRLLCVNFNRHFASLDADAFIRDLLVERLGVKFLVVGDDFCFGKARQGNFAM 120

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G+KYGF  V        + + VSS+ IR AL    +  AA +LG  ++I   V HG
Sbjct: 121 LQEAGKKYGFTVVNTQSFCLAQLR-VSSTAIREALAHDQLAVAAQMLGRDYSISGRVSHG 179

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            K+GRT+GFPTAN+ L   +    GVY ++    D     GVAN G+ PT+       LE
Sbjct: 180 RKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLDNKPIGGVANIGQRPTVNGV-RQQLE 238

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +FDF   +YG++  V     LR E KF+  + LK  +  D + AR  L  
Sbjct: 239 VHLFDFQANLYGKQLEVVLLHKLRDEKKFESFDALKQQIELDAEAARVWLRQ 290


>gi|89069025|ref|ZP_01156406.1| riboflavin biosynthesis protein RibF [Oceanicola granulosus
           HTCC2516]
 gi|89045394|gb|EAR51459.1| riboflavin biosynthesis protein RibF [Oceanicola granulosus
           HTCC2516]
          Length = 312

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 108/315 (34%), Positives = 163/315 (51%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +   +     +    +G  VAIGNFDG+HLGH  +++  +A+      P+ V++F PH
Sbjct: 1   MRI---LRDTAFIDPAARGAAVAIGNFDGVHLGHGAVIDTTRALAAEQGVPLGVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    SP F L     +   L K+G  AL    FT   A  S E F +++L + L V
Sbjct: 58  PRQVFAPDSPPFRLMNAESRANRLAKLGVEALYEVPFTPTLAGLSPEAFAREILADALGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK RAG    L + G + GF    +  L       +SS+ IRTAL++G 
Sbjct: 118 AHVVVGQDFYFGKGRAGTAETLGRLGAELGFGVT-VAPLLALGETEISSTAIRTALSEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--- 235
             +AA +LG+   I+ +V+HG++ GR LG+PTANM +      + G+YA++         
Sbjct: 177 PRDAAGMLGHWHRIDGEVVHGDQRGRLLGYPTANMSIEGLHPPRFGIYAVKVDVLGGPHA 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            SY G A+ G  PT         E+F+FDF+ ++Y    +V+  +YLR E +F  +E L 
Sbjct: 237 GSYDGAASIGVRPTF-GVNSANCETFLFDFTGDLYNTHLSVALIEYLRDEERFDSVEALV 295

Query: 296 IYMGEDEKKARKILE 310
             M  D  +AR +L 
Sbjct: 296 AQMDADCARARALLA 310


>gi|333011406|gb|EGK30820.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-272]
 gi|333021645|gb|EGK40894.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-227]
          Length = 295

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLLVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|323157919|gb|EFZ44022.1| riboflavin biosynthesis protein RibF [Escherichia coli EPECa14]
          Length = 295

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             +   + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLGVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|320186136|gb|EFW60878.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Shigella
           flexneri CDC 796-83]
          Length = 295

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVY +      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYVVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D + ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKP 294


>gi|17547176|ref|NP_520578.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           solanacearum GMI1000]
 gi|17429478|emb|CAD16164.1| probable riboflavin biosynthesis protein [Ralstonia solanacearum
           GMI1000]
          Length = 332

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RTPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + + F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPQAFVRNVLVDGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFTYLQAAGAQFGFEVEQMGSV-SESGIRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLTEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE+ +FDF   +YG+   V F   LR E +F  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEAHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
             D   AR     + P
Sbjct: 296 ARDCVDARHFFGLAIP 311


>gi|113868999|ref|YP_727488.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           eutropha H16]
 gi|113527775|emb|CAJ94120.1| FAD Synthase [Ralstonia eutropha H16]
          Length = 381

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 5/312 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 51  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 110

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 111 FTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAAQSPQAFVENVLWHGLHARWVL 170

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ+ G +YGF    +  + +     +SSS +R AL  G + +A
Sbjct: 171 VGDDFRFGARRAGDFTYLQEAGRRYGFDVEQMGSV-SEGGIRISSSAVRQALADGDLEHA 229

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 230 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVSGIFVVQVHGIADQPLPGVA 289

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G +LLE  +FDF + +YG+   V F   LR E +F ++++L   + +D 
Sbjct: 290 SIGVRPTIEDAGRVLLEVHLFDFKENLYGKLVRVEFMKKLRDEARFDNLDELTAAIAKDS 349

Query: 303 KKARKILESSYP 314
             AR     + P
Sbjct: 350 ADARAFFGLTAP 361


>gi|56697986|ref|YP_168357.1| riboflavin biosynthesis protein RibF [Ruegeria pomeroyi DSS-3]
 gi|56679723|gb|AAV96389.1| riboflavin biosynthesis protein RibF [Ruegeria pomeroyi DSS-3]
          Length = 310

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 169/314 (53%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  +    +      +G  VAIGNFDG+H+GH  ++E A + A + P+ V++F PHPR
Sbjct: 1   MRIIRDYRFLEP---ADRGASVAIGNFDGVHIGHRSVIELARQAAPDVPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 SP F L     +   LEK+G   L    F    A  + E F + V+ + L +K 
Sbjct: 58  EYFAPDSPPFRLMRGPARAHRLEKLGVERLYELPFNAALAGLTPEGFARGVICDGLGLKH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R+G+   + + G++ GF    I  L     +++SS+ IRTAL++G   
Sbjct: 118 VVIGADFCFGKGRSGNAADMVRFGQQMGFGVT-IAPLLEQTERVISSTAIRTALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +VI GE+ GR LGFPTANM +      + GVYA+     D   + S
Sbjct: 177 DAAAMLGHWHRIEGEVIGGEQRGRELGFPTANMSIDGLHPPRFGVYAVLVDVLDGPHKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+F+FDFS ++YG   +V   +YLRPE+ F  ++ L   
Sbjct: 237 YHGAASVGVRPMFNGERP-NIETFLFDFSGDLYGATLSVGLVEYLRPEMTFDGLDALIAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL +
Sbjct: 296 MDADCARARDILAA 309


>gi|300690678|ref|YP_003751673.1| riboflavin biosynthesis protein ribF [includes: riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum PSI07]
 gi|299077738|emb|CBJ50376.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum PSI07]
          Length = 332

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + ++F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPQEFVRNVLVDGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFTYLQAAGAQFGFEVEQMGSV-SESGIRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVSGIFIVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  +FDF   +YG+   V F   LR E +F  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
            +D   AR     + P
Sbjct: 296 AKDCVDARHFFGLALP 311


>gi|299065946|emb|CBJ37127.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum CMR15]
          Length = 332

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + ++F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPQEFVRNVLVDGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFTYLQTAGAQFGFEVEQMGSV-SESGIRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  +FDF   +YG+   V F   LR E +F  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHLFDFHANVYGRLVRVEFMKKLRDEARFDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
            +D   AR     + P
Sbjct: 296 AKDCVDARHFFGLAIP 311


>gi|163737795|ref|ZP_02145212.1| putative manganese-dependent inorganic pyrophosphatase [Phaeobacter
           gallaeciensis BS107]
 gi|163742899|ref|ZP_02150283.1| riboflavin biosynthesis protein RibF [Phaeobacter gallaeciensis
           2.10]
 gi|161383863|gb|EDQ08248.1| riboflavin biosynthesis protein RibF [Phaeobacter gallaeciensis
           2.10]
 gi|161389321|gb|EDQ13673.1| putative manganese-dependent inorganic pyrophosphatase [Phaeobacter
           gallaeciensis BS107]
          Length = 310

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 110/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G V AIGNFDG+H GH  +++ A +    +P+ V++F PHPR
Sbjct: 1   MRIIRDFQF---VDPKDRGAVAAIGNFDGVHRGHQSVIDLAREAEPQAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +  F L     +   LEK+G   L +  F    +  + E F +KV+ + L ++ 
Sbjct: 58  EFFAPDAKPFRLMSAEARASRLEKLGVERLYQLNFNAALSGLTPEAFARKVIADGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G+ F FGK RAG    L++ GE  GF    I  L       VSS+ IR AL+ G   
Sbjct: 118 VVVGSDFCFGKGRAGTAEDLKRFGEDMGFGVT-IAPLMEYSEDTVSSTAIRRALSDGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA++LG+   IE +VI GE+ GR LG+PTANM +        GVYA+     D   Q S
Sbjct: 177 DAANMLGHWHRIEGEVIGGEQRGRELGYPTANMSIDGLHQPAFGVYAVLVDVLDGPHQGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    + P  +E+F+FDF+  +YG   +V   +YLRPE+ F  ++ L   
Sbjct: 237 YHGAASVGVRPMFDGSHP-NIETFLFDFTGNLYGATLSVGLVEYLRPEMTFDGLDGLLAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR +L +
Sbjct: 296 MDADCTQARSLLAT 309


>gi|56477956|ref|YP_159545.1| riboflavin biosynthesis protein [Aromatoleum aromaticum EbN1]
 gi|56313999|emb|CAI08644.1| probable riboflavin biosynthesis protein [Aromatoleum aromaticum
           EbN1]
          Length = 312

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 105/313 (33%), Positives = 156/313 (49%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VF  I    +     +  V+ IGNFDG+H GH  +L+     A +   P  VL+F PH
Sbjct: 1   MQVFRGIPERAA-----QSSVLTIGNFDGVHRGHQALLKLLTDKARSLALPAVVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     L+    +  +L   G   +   +F    A  +A+QFI  +LV  L V
Sbjct: 56  PREYFCPADAPARLASLREKLLLLASCGVDRVHVCRFDARFAALTADQFIDDILVRGLGV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  FRFG  R GD  +LQ RG  + F    +  L +   +  SSS IR AL +G 
Sbjct: 116 RHLIIGDDFRFGVKRQGDFALLQARGASHRFAVEAMPTL-DIDGERASSSAIRAALAEGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA LLG  ++I   V+HG+KIGRTLG+PT N+Q+        GV+A+          
Sbjct: 175 LAHAARLLGRPYSIAGRVVHGDKIGRTLGYPTVNIQMKHRRPALSGVFAVAVEGLAAEPV 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVA+ G  PT+  +G   LE  +FD++++ YG    V F +  R E KF+ ++ L   +
Sbjct: 235 AGVASIGVRPTITASGRPRLEVHLFDWNRDCYGAHLRVHFLNKQRDETKFESLDALIAQI 294

Query: 299 GEDEKKARKILES 311
             D + A      
Sbjct: 295 ARDAENAHAWFAQ 307


>gi|261854827|ref|YP_003262110.1| riboflavin biosynthesis protein RibF [Halothiobacillus neapolitanus
           c2]
 gi|261835296|gb|ACX95063.1| riboflavin biosynthesis protein RibF [Halothiobacillus neapolitanus
           c2]
          Length = 313

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 113/311 (36%), Positives = 163/311 (52%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +LP    G VV +GNFDG+HLGH  +L QA   A     P+ VL F P 
Sbjct: 1   MQLIRGL---CALPAFPDGCVVTLGNFDGVHLGHQAVLRQAADQAREFGLPLVVLIFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR      +P+  L+    +   + ++G    L+ + F    A  +AE F+++VLV+ L 
Sbjct: 58  PREFFAPHAPVARLTRLRERAAFIAELGVVDVLLVHPFNAAFAQSTAEAFVEQVLVDALH 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  FRFGK+R GD  +L++ G+++ F             + VSS+ IR+ LT+ 
Sbjct: 118 ARRIVIGDDFRFGKNRQGDFALLEQLGQRFDFSV-QAAATWALDGERVSSTRIRSHLTER 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  AA LLG  FT+   VIHG+K GR LGFPTAN+ L   +    GV+A++    D   
Sbjct: 177 DVAGAARLLGRPFTLCGRVIHGDKRGRQLGFPTANVALHRRLSPLRGVFAVKTTLPDGAI 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +GVAN G  PT+       LE  +FDF ++IYGQ   V+F   LR E KF  +E L   
Sbjct: 237 VNGVANVGTRPTV-DGQDARLEVHLFDFDRDIYGQMVRVAFCHPLRDEQKFSSLEALMEQ 295

Query: 298 MGEDEKKARKI 308
           +  D   AR  
Sbjct: 296 ITRDASAARAW 306


>gi|221638725|ref|YP_002524987.1| Riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|221159506|gb|ACM00486.1| Riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides KD131]
          Length = 306

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 174/314 (55%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++++    Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR
Sbjct: 1   MRIYNHW---QGLEASDRGASIAMGNFDGVHLGHQHVIDLAR---GRGPLGVVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   +   F L     +   L K+G   L    FT + A  + E F ++VL E L V  
Sbjct: 55  EVFAPNGEPFRLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG+ RAG    L++ G  +GF     D +   +   +SS+ IR ALT+G   
Sbjct: 115 VVVGADFCFGRGRAGTAEDLERLGRTHGFEVTVAD-ILTMEGTGISSTAIRAALTEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +V+HG+K GR LG+PTANM +S   L + GVYA++          S
Sbjct: 174 DAAAMLGHWHRIEGEVLHGDKRGRNLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG A+ G  P    N P  LESF+FDFS ++YGQ  +V+F +YLRPE+ F  +  L   
Sbjct: 234 YSGAASLGVRPMFGENRP-NLESFLFDFSGDLYGQHLSVAFVEYLRPEMVFDGLPALIAQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL S
Sbjct: 293 MDRDCARAREILGS 306


>gi|84686163|ref|ZP_01014058.1| riboflavin biosynthesis protein RibF [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665690|gb|EAQ12165.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           HTCC2654]
          Length = 312

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +  + +    +    +G  VAIGNFDG+H GH  +++ A + A     P+ V++F PH
Sbjct: 1   MRIIRDFQF---VEQKDRGASVAIGNFDGVHRGHQFVIDIARREATALSAPLGVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR         F L     +   L+ +G   L    F    +  + E F ++V+V+ L +
Sbjct: 58  PREYFAPGGDPFRLMNAEARANRLDWLGVEKLYELTFNDTLSALTPEDFARRVIVDGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FG  RAG+   L   G++ GF    +  L ++    +SS+ IR AL++G 
Sbjct: 118 RHVVVGADFHFGAKRAGNVDTLVALGQEMGFGVT-VAPLMHDDDVEISSTAIRQALSEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQ 235
             +AA +LG+   I+  V+ G++ GR LG+PT NM ++     K GVYA++         
Sbjct: 177 PRDAARMLGHWHRIDGTVVRGDQRGRDLGYPTINMSIAGLHPPKFGVYAVKADVLTGPHA 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  PT   N P  +E+F+FDF  ++YG+  +V+  DYLRPE +F  ++ L 
Sbjct: 237 GEYGGAASIGVRPTFGENLP-NIETFLFDFKGDLYGEHISVALVDYLRPEERFDSLDALI 295

Query: 296 IYMGEDEKKARKILESS 312
             M +D  KAR +L ++
Sbjct: 296 EQMDDDCAKARAVLAAT 312


>gi|162146413|ref|YP_001600872.1| riboflavin biosynthesis protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209543578|ref|YP_002275807.1| riboflavin biosynthesis protein RibF [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784988|emb|CAP54531.1| putative riboflavin biosynthesis protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531255|gb|ACI51192.1| riboflavin biosynthesis protein RibF [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 315

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 1/307 (0%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H     + +P   +G   A+GNFDG+HLGH  ++        +  + V++F PHPR + +
Sbjct: 4   HLHTGWRHIPAEARGMAAALGNFDGVHLGHAHLVHLLHAARPDLGLAVVTFEPHPRELFR 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
              P F L+ P  +   L  +G   + +  F    +  SAE+F+  VL E L ++ +  G
Sbjct: 64  PQDPPFRLTLPEERLAALSALGVRHVFQIPFDAAFSAMSAERFVTDVLHEGLGLRHLGCG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG  R G+   L  R E+ G     +  L +      SS+ IR  L  G+   AA 
Sbjct: 124 ADFVFGHRRGGNVTFLADRAEELGIGLTAVPPLTDASGPY-SSTRIRRLLQDGYPERAAE 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG  ++I   V HG+K GR LGFPTAN+ L   +    GVYA+  R  D  ++ GVAN 
Sbjct: 183 ELGRAWSIRGVVQHGDKRGRLLGFPTANVPLGRHLEPARGVYAVTVRLADGRAWPGVANI 242

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT+       LE  + DF  ++YGQ  +V     LR E +F  ++ LK  + ED   
Sbjct: 243 GRRPTIDDGQESRLEVHLLDFDGDLYGQTLSVGLHTLLREERRFAGLDALKAQIAEDAAT 302

Query: 305 ARKILES 311
           AR  L++
Sbjct: 303 ARAYLDT 309


>gi|187925132|ref|YP_001896774.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia phytofirmans PsJN]
 gi|187716326|gb|ACD17550.1| riboflavin biosynthesis protein RibF [Burkholderia phytofirmans
           PsJN]
          Length = 331

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDTFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G++YGF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFDSLKAAGQQYGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDSARAALGRDYLISGHVVHGMKLGRDLGFPTLNLAIAHKRPALSGIFVVRVHGVADEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|254477243|ref|ZP_05090629.1| riboflavin biosynthesis protein RibF [Ruegeria sp. R11]
 gi|214031486|gb|EEB72321.1| riboflavin biosynthesis protein RibF [Ruegeria sp. R11]
          Length = 310

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G   AIGNFDG+H GH  +++ A     ++P+ V++F PHPR
Sbjct: 1   MRIIRDFQF---VDPQDRGASAAIGNFDGVHRGHQSVIDLARNAVPDAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   LEK+G   L +  F    +  S E F +KV+ + L ++ 
Sbjct: 58  EFFAPDAPAFRLMSAEARASRLEKLGVERLYQLNFNAALSGLSPEGFARKVIADGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G+ F FGK RAG    LQ+ G + GF    I  L       VSS+ IR AL+ G   
Sbjct: 118 VVVGSDFCFGKGRAGTAEDLQRFGAEMGFGVT-IAPLMEYSEDTVSSTAIRRALSDGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA++LG+   IE +VI GE+ GR LG+PTANM +        GVYA+     D   + S
Sbjct: 177 DAANMLGHWHRIEGEVIGGEQRGRELGYPTANMSIDGLHQPAFGVYAVLVDVLDGPNKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    + P  +E+F+FDF+  +YG   +V   +YLRPE+ F  ++ L   
Sbjct: 237 YHGAASVGVRPMFDGSHP-NIETFLFDFTGNLYGATLSVGLVEYLRPEMTFDGLDGLLAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D +KAR IL +
Sbjct: 296 MEADCEKARNILSA 309


>gi|296157164|ref|ZP_06840000.1| riboflavin biosynthesis protein RibF [Burkholderia sp. Ch1-1]
 gi|295892500|gb|EFG72282.1| riboflavin biosynthesis protein RibF [Burkholderia sp. Ch1-1]
          Length = 331

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDSARAALGRDYVISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVGDEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|295677442|ref|YP_003605966.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1002]
 gi|295437285|gb|ADG16455.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1002]
          Length = 349

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 4/309 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           + + + LPN        + IGNFDG+H GH  +L      A     P+ V++F PHPR  
Sbjct: 19  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAANARGLPVCVMTFEPHPREF 78

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +     ++    + + L   G   ++   F    A+ S + F+++++V  L  + V+
Sbjct: 79  FNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHARWVM 138

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FR+G  RAGD   L++ G+ YGF    +  + +     +SSS +R AL  G + +A
Sbjct: 139 IGDDFRYGAKRAGDFASLREAGKHYGFEVEQMATVADPSGARISSSGVRAALVAGDLDSA 198

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              LG  + I   V HG K+GR LGFPT N+ ++       G++ ++    D+    GVA
Sbjct: 199 RAALGRDYLISGHVTHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGIDEHPLPGVA 258

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +  D 
Sbjct: 259 SLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLETLTAAIARDV 318

Query: 303 KKARKILES 311
             AR    +
Sbjct: 319 ANARAWFAA 327


>gi|265989552|ref|ZP_06102109.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263000221|gb|EEZ12911.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 290

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 127/283 (44%), Positives = 175/283 (61%)

Query: 42  IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
           +    + P  VL+F PHPR+  +   P+  L+  + + +IL  MGF A++   FT E + 
Sbjct: 7   LAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQ 66

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK 161
            SAE F+Q +LVE L    V+TG  F FGK R G    L + G+K GF    +D   +  
Sbjct: 67  RSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEG 126

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
             +VSS+ IR  L++G V  AA LLGYR+ I  +VIHG+K+GRTLGFPTANM L+P   L
Sbjct: 127 GMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSL 186

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
           K G+YA+RFR  D   Y GVA+FGR PT+   G  LLE+F+FDFS ++YG+   VSFF +
Sbjct: 187 KHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGF 246

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           LR E+KF  ++ L   M +DE +AR +L    P+S  DR++ F
Sbjct: 247 LRGEVKFDGLDSLIDQMKQDEAQARALLADVRPISGLDRMLSF 289


>gi|145297753|ref|YP_001140594.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850525|gb|ABO88846.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 324

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 158/311 (50%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GHH +L +     +    P  V+ F P 
Sbjct: 1   MELIRGI---HNIKPRHRGCVLTIGNFDGVHQGHHAVLARLQEKAVQLGLPACVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   S+    LS    + + L+ M    ++  +F    A  S   FI+++LVE L V
Sbjct: 58  PLELFAGSAAPARLSRLREKYEALKGMQIDRMLCVRFNHRFAEQSPNSFIEQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFGK R GD  +L++ G ++GF  +     +  + Q VSS+ +R AL  G 
Sbjct: 118 RYLVVGDDFRFGKGREGDFHLLEEAGHRFGFEVISTQSFQ-LERQRVSSTLVREALKAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     +LG  +TI   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T +
Sbjct: 177 MAEVEMMLGRPYTISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVLCSGKT-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDFS ++YGQ+  V     LR E KF     LK  +
Sbjct: 236 PGVANVGVRPTVN-GTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFASFIALKEQI 294

Query: 299 GEDEKKARKIL 309
             D   AR   
Sbjct: 295 ERDALAARAWF 305


>gi|308272077|emb|CBX28685.1| hypothetical protein N47_G40090 [uncultured Desulfobacterium sp.]
          Length = 311

 Score =  338 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 167/315 (53%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + ++IE   S+    K  VV IGNFDG+H+GH  +    I+ A+  N     ++FNPH
Sbjct: 1   MKIINSIE---SIKKPFKNAVVTIGNFDGVHIGHQALFHAVIEKADSINGTSVGITFNPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++ +  I  ++    + +++EK G   LI   FT E A   A +FI+ +L++ + +
Sbjct: 58  PVKVLKKNRHIPLITIHEQKIELIEKTGLDVLICIPFTPEFAKLPALEFIKDLLIKKIGM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALTK 176
           K ++ G  + FGK+R G+   L+   ++YG+  +  D   + N     +SS+ IR  + +
Sbjct: 118 KAIVVGNDYVFGKNREGNTEFLKACSKEYGYEVIVADWISITNTIPGRISSTKIRKLVAE 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           G V     LLG  + I   V  G   G   LGFPTAN+ +  ++  K+GVYA+       
Sbjct: 178 GRVAKTQQLLGRYYQIRGTVEKGRNRGGKLLGFPTANLLMQDELAPKKGVYAVTVEYNGL 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y GVAN G +PT   N    +E  + DF+++IYG+   ++F   +R E+KF  I +L 
Sbjct: 238 K-YKGVANIGYSPTFDDN-IFTIEVHLLDFNKDIYGKNIRINFVKRIRDELKFSGIAELS 295

Query: 296 IYMGEDEKKARKILE 310
             + +D  KAR IL 
Sbjct: 296 EQIKKDIDKARSILS 310


>gi|91784972|ref|YP_560178.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia xenovorans LB400]
 gi|91688926|gb|ABE32126.1| FMN adenylyltransferase [Burkholderia xenovorans LB400]
          Length = 331

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNQTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDSARAALGRDYVISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVADEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|52425807|ref|YP_088944.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307859|gb|AAU38359.1| RibF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 314

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 158/318 (49%), Gaps = 11/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G  + IGNFDG+HLGH  IL+   + AN    P+ V+ F P 
Sbjct: 1   MQLIRGL---HNLRRDFAGCALTIGNFDGVHLGHQAILQHLREKANQLKLPMVVMLFEPQ 57

Query: 59  PRTII----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PR               L     +   L++ G   +I  KF    A      FI+  LV 
Sbjct: 58  PREYFVSADAKQQAPARLMRLRDKLHYLQQQGVDYVICVKFDRTFAKQDPNLFIETYLVN 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L VK +  G  FRFG +R GD  +L+  G+KYGF          +K + +SS+ IR AL
Sbjct: 118 RLHVKFLSIGDDFRFGANRRGDFSLLESAGKKYGFSVEDNRTFSLDKLR-ISSTAIRHAL 176

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
               +  A  LLG  ++I   V+HG+K+GRT+GFPTAN++L   +   +GVYA+R +   
Sbjct: 177 AHDDLKKAEELLGRAYSIFGKVVHGQKLGRTIGFPTANIRLQRQVNPLQGVYAVRIQCPC 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             ++ GVAN G+ PT+       LE  +FDF + +YGQ   V+F   +R E+KF  +  L
Sbjct: 237 GRAFQGVANIGQRPTVNGV-EQRLEVHLFDFDENLYGQNIAVTFCHKIRNEMKFPSLNAL 295

Query: 295 KIYMGEDEKKARKILESS 312
           K  +  D   A++    +
Sbjct: 296 KQQIARDVLVAQQYFRQN 313


>gi|254488274|ref|ZP_05101479.1| riboflavin biosynthesis protein RibF [Roseobacter sp. GAI101]
 gi|214045143|gb|EEB85781.1| riboflavin biosynthesis protein RibF [Roseobacter sp. GAI101]
          Length = 310

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 161/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G   AIGNFDG+HLGH  +++ A      +P+ V++F PHPR
Sbjct: 1   MEIIRDYQF---VAESDRGASAAIGNFDGVHLGHRSVIDLARAALPEAPLGVVTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++  F L  P  +   LEK+G   L   KF    A  S   F + VLVE L ++ 
Sbjct: 58  AFFAPNAAPFRLMGPEARAHQLEKIGVDKLYEVKFDAALAGLSPYDFAKNVLVEGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK+RAG    + + G + GF    +  L       VSS+ IR ALT G   
Sbjct: 118 VVVGADFCFGKNRAGTAAQMVEFGAQLGFGVT-VAPLMAQGESTVSSTAIRAALTNGKPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
            AA +LG+   +E  V+HGEK GR LG+PTANM +        GVYA+     +      
Sbjct: 177 EAAAMLGHWHRLEGPVLHGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N    LE+FIFDF  ++YG+  +V+  ++LR E KF  I+ L   
Sbjct: 237 YHGVASLGVRPMFGEN-KANLETFIFDFKGDLYGKHISVALIEHLRGEEKFDGIDTLITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL +
Sbjct: 296 MDADSAQARAILAA 309


>gi|83941347|ref|ZP_00953809.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. EE-36]
 gi|83847167|gb|EAP85042.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. EE-36]
          Length = 310

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 162/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G   AIGNFDG+HLGH  +++ A     ++P+ V++F PHPR
Sbjct: 1   MEIIRDYQF---VSASDQGATAAIGNFDGVHLGHRSVIDMARAALPDAPLGVVTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L+K+G   L    F    +  S   F Q+V+V+ L ++ 
Sbjct: 58  EYFAPDAPPFRLMGAEARAHQLQKIGVDKLYELGFDAALSGLSPRAFAQEVIVDGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  FRFGK RAG    LQ  G + GF    I  L       VSS+ IR ALT+    
Sbjct: 118 VVVGADFRFGKARAGTAEQLQAFGAEMGFGVT-IAPLMAKGPDTVSSTAIRNALTEARPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   +E  ++HGEK GR LG+PTANM +        GVYA+     +      
Sbjct: 177 DAAAMLGHWHRVEGPILHGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N    LE+FIFDF  ++YG+  +V+  D+LR E KF  +E L   
Sbjct: 237 YHGVASLGVRPMFGEN-RANLETFIFDFKGDLYGKHVSVALVDHLRGEEKFDSLEALITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL +
Sbjct: 296 MDADSAQARSILAA 309


>gi|298293831|ref|YP_003695770.1| riboflavin biosynthesis protein RibF [Starkeya novella DSM 506]
 gi|296930342|gb|ADH91151.1| riboflavin biosynthesis protein RibF [Starkeya novella DSM 506]
          Length = 316

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 5/311 (1%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
           H F  +   ++LP  L   VVAIGNFDG+H GH  ++  A+  A     P   ++F PHP
Sbjct: 9   HPFRVLRDPETLPPALANPVVAIGNFDGVHRGHRAVIGTAVDQARSLGRPALAVTFEPHP 68

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R   + + P+F L+P +++   L   G    +   F    A   AE F+  VLV  L V 
Sbjct: 69  RAFFRPAEPMFRLTPGAMKLDRLAGTGLDGAVVLTFDAGLAGLDAETFVSDVLVGRLGVA 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FGK R G    L++ G ++GF    +  L +  +Q V+SS IR AL +G V
Sbjct: 129 MVVAGFDFHFGKGRGGSPAFLREAGRRHGFAVEIVAPLLDEGAQ-VASSVIRAALAQGRV 187

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             AAH+LG  + IE++VIHG+K GR LG+PTANM+L P + L  G+YA+       T   
Sbjct: 188 EQAAHMLGSPWEIEAEVIHGDKRGRNLGYPTANMRLDPAVTLAHGIYAVTVEIDGVTR-K 246

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVA+FGR PT   +G   LE+FIFD+  ++YG+   V+F  YLRPE+KF  +E L   M 
Sbjct: 247 GVASFGRRPTF-DDGAPRLETFIFDYEGDLYGRVLRVAFHAYLRPELKFDSVEALIAQMN 305

Query: 300 EDEKKARKILE 310
           ED  +AR  L+
Sbjct: 306 EDSARARAALD 316


>gi|85712276|ref|ZP_01043327.1| FAD synthase [Idiomarina baltica OS145]
 gi|85693903|gb|EAQ31850.1| FAD synthase [Idiomarina baltica OS145]
          Length = 317

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 109/322 (33%), Positives = 161/322 (50%), Gaps = 17/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +   I    +L +   G V+ IGNFDG+HLGH  +L Q    A    +   V++F P 
Sbjct: 1   MELIRGI---HNLRSEHHGCVLTIGNFDGVHLGHQAVLAQVKAQARALGVAAAVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I Q       L+    +   L        +  +F  + A+    +FI+ VLVE L V
Sbjct: 58  PQEIFQPEKAPARLTNWREKYLALRDQQIDRHLVIEFNRKFASQPPIEFIENVLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R GD  +LQ+ G++ GF  V     R  + + VSS+ IR AL +G 
Sbjct: 118 KFLVVGDDFRFGYKREGDFALLQREGKRLGFEVVDTRSYRQQQLR-VSSTAIRAALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ----- 233
              A  +LG  + +   ++HG K GRT+GFPTAN+ L        GV+A++         
Sbjct: 177 FERAESMLGRPYQMMGKIVHGRKNGRTIGFPTANIPLKRLKSPLHGVFAVKINVGRALGA 236

Query: 234 -----DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                 + +Y GVAN G  PT+  +  + LE  +FDFS  +YGQ  TV+    LR E +F
Sbjct: 237 TTNSRAEGTYHGVANLGTRPTLNGD-EVQLEVHLFDFSGNLYGQHATVTPVAKLRSEQRF 295

Query: 289 KDIEKLKIYMGEDEKKARKILE 310
             +E LK  + +D  +AR +L 
Sbjct: 296 ASLEHLKQQIEKDAARARALLS 317


>gi|239787489|emb|CAX83959.1| Riboflavin biosynthesis protein [uncultured bacterium]
          Length = 323

 Score =  337 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 113/318 (35%), Positives = 178/318 (55%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +F +      LP   +G V+A+GNFDG+H GH +++E A  I      P  V++F PH
Sbjct: 1   MRLFRHY---TELPEETRGAVLALGNFDGVHRGHQIVIETARGIAAREGRPCGVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+  +    F L+P  I+ + +E +G   LI   F  + A +SA +FI+ VL+E L+V
Sbjct: 58  PRTLFSADKEPFRLTPFRIKARSIETLGADFLIAQHFDADFAGHSASEFIETVLIENLQV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  + FGK R+GD  +L+      GF T  +D +      + SS+ +R  L +G 
Sbjct: 118 RHVVVGYDYVFGKKRSGDVSVLKAA---QGFSTTRVDPVTAPDGDVYSSTRVRACLVEGR 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
             +AA LLG  + +E  V  G++ GR +GFPTAN+ L        G YA+R    + Q  
Sbjct: 175 PRDAAGLLGRYWEVEGRVERGDQRGRLIGFPTANLHLGEYQRPATGAYAVRAGIDQGQGT 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + GVANFGR P+   N   ++E  +FDF+ ++Y +   V+  D+LRPE +F  +E LK
Sbjct: 235 VWHDGVANFGRRPSF-DNREPIMEVHLFDFTGDLYQRHLRVALVDFLRPECRFDGLEALK 293

Query: 296 IYMGEDEKKARKILESSY 313
             + +D  +AR +L++ +
Sbjct: 294 AQIAQDATQARILLQTRH 311


>gi|126661618|ref|ZP_01732645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cyanothece
           sp. CCY0110]
 gi|126617097|gb|EAZ87939.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cyanothece
           sp. CCY0110]
          Length = 306

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 6/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + +  S  N +    +A+GNFDGIHLGH  +L+  +++      T+++F PHP+      
Sbjct: 1   MWVTSSTNNVITPTAIALGNFDGIHLGHRQVLKPILELQKQYTPTIVTFTPHPQEYFSGQ 60

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    L+P + + K+LE +    L+R  F    A+ S + F++ +LV+ L  K +  G  
Sbjct: 61  TR-QLLTPLTEKVKLLESLNIRQLVRLPFDRSLASLSPQAFVEDILVKQLNAKYISVGQD 119

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           FRFGK RAG+  +LQ+  +K+G           L  + S  +SSS IR  L  G+V  A 
Sbjct: 120 FRFGKGRAGNAQMLQELAQKFGVFVHITKLQTCLNEDNSLRISSSRIRQYLATGNVRQAK 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVA 242
            +LGY +++E  V+ G+++GRT+GFPTAN+Q+    +L + GVY +R     +    GV 
Sbjct: 180 EMLGYPYSLEGIVVKGQQVGRTIGFPTANLQVPLNKLLPRRGVYCVRAFLTTEEVIKGVI 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT+    P  +E  + D+S  +YG    V    +LR E KF  ++ LK  + +D 
Sbjct: 240 NIGSRPTVNGQVP-TVEVHLLDWSGNLYGTFVRVDLEKFLRSEQKFPSLDALKNQIKQDC 298

Query: 303 KKARKILE 310
             AR+IL 
Sbjct: 299 IVARQILA 306


>gi|126461748|ref|YP_001042862.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103412|gb|ABN76090.1| riboflavin kinase / FMN adenylyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 306

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 174/314 (55%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++++    Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR
Sbjct: 1   MRIYNHW---QGLEASDRGASIAMGNFDGVHLGHQHVIDLAR---GRGPLGVVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   +   F L     +   L K+G   L    FT + A  + E F ++VL E L V  
Sbjct: 55  EVFAPNGEPFRLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG+ RAG    L++ G  +GF     D +   +   +SS+ IR ALT+G   
Sbjct: 115 VVVGADFCFGRGRAGTAEDLERLGRTHGFEVTVAD-ILTVEGTGISSTAIRAALTEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +V+HG+K GR LG+PTANM +S   L + GVYA++          S
Sbjct: 174 DAAAMLGHWHRIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG A+ G  P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   
Sbjct: 234 YSGAASLGVRPMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL S
Sbjct: 293 MDRDCARAREILGS 306


>gi|330811821|ref|YP_004356283.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379929|gb|AEA71279.1| Putative bifunctional protein: Riboflavin kinase; FAD synthetase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 312

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 153/314 (48%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPQHRGCVATIGNFDGVHRGHQAILARLRERALELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     ++    L+    + ++L   G   ++   F    +  SA  F++ +LV+ L V
Sbjct: 58  PRECFDPATAPARLARLRDKLQLLAAEGIDRVLCLAFNRRLSKLSAAAFVETILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG DR GD   LQ+ G   GF       +  +    VSS+ +R AL    
Sbjct: 118 KHLEVGDDFRFGCDRVGDFNYLQQAGIAQGFTVEAAQTVEID-GLRVSSTQVRNALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  + I   ++HG+K+ R LG PTAN+QL    +   GV+ +     D  ++
Sbjct: 177 FELAERLLGRPYRIAGRILHGQKLARQLGTPTANVQLKRRRVPLTGVFLVSVEI-DGKTW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVQGDGKAHLEVHVLDFAGDLYDRRLTVVFHHKLREEQRFASLEALKTAI 295

Query: 299 GEDEKKARKILESS 312
             D   AR ++ +S
Sbjct: 296 HADIAAARALVATS 309


>gi|296445033|ref|ZP_06886994.1| riboflavin biosynthesis protein RibF [Methylosinus trichosporium
           OB3b]
 gi|296257454|gb|EFH04520.1| riboflavin biosynthesis protein RibF [Methylosinus trichosporium
           OB3b]
          Length = 325

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 6/308 (1%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
              Q+ P  L G VVAIGNFDG+H GH  ++  A  +A     P  +L+F PHP  +   
Sbjct: 15  RDPQAPPAGLAGAVVAIGNFDGLHRGHRGVIAHAQALARSLGKPCALLTFEPHPADVFAG 74

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            S IF L+PP  +  +L ++G   ++   F  + A     +F +++L   L V   + G 
Sbjct: 75  RSVIFRLTPPDAKAALLARLGLDGMVILTFDKDFAARPPREFTEEILARRLGVSAAVAGY 134

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNA 182
            F FG  RAG+   L+  GE+ GF    +  +  +++   + VSS+  R AL  G V  A
Sbjct: 135 DFCFGAKRAGNPDFLRAEGERLGFAVEIVPRVTQDEAGSLEAVSSTATREALQSGDVELA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A LLG+ + +E  V  G K+GRTLGFPTAN+ L P   L+ G+YA+           GVA
Sbjct: 195 ARLLGHPYFVEGVVQEGRKLGRTLGFPTANIALDPSSRLRHGIYAVTLEAGGVVR-EGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           NFGR PT+   G  LLE F+FDF  ++YG+   V+F  ++R E KF  ++ L   M +D 
Sbjct: 254 NFGRRPTVEEQGAPLLEVFVFDFDGDLYGETVEVAFIGFIRGEAKFPSLDALTAQMRDDA 313

Query: 303 KKARKILE 310
           +KAR+IL 
Sbjct: 314 QKAREILA 321


>gi|311107262|ref|YP_003980115.1| riboflavin biosynthesis protein RibF [Achromobacter xylosoxidans
           A8]
 gi|310761951|gb|ADP17400.1| riboflavin biosynthesis protein RibF [Achromobacter xylosoxidans
           A8]
          Length = 321

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M     I  +   P+      + IGNFDG+H GH  +L +   +    N    V++F PH
Sbjct: 1   MKPSLRIYRSLPPPDRRAPCALTIGNFDGVHRGHQAMLARVCQVARDRNLTPAVMTFEPH 60

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +S    +   L + G S ++  +F    A  SA  FI+++LV
Sbjct: 61  PREYFATLNQRPELAPTRISGLRDKLAALARYGISQVVVERFNARLAEMSANAFIEQLLV 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  K ++ G  FRFG  R+GD  +L++ G ++GF    + ++ + +   +SSS +RTA
Sbjct: 121 QGLHAKWLLVGEDFRFGHKRSGDIDLLREAGLRHGFEVQTLADVTDQQGHRISSSEVRTA 180

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  A HLLG+ + I   VIHG+K+GRTLGFPT N++++     + G+Y ++    
Sbjct: 181 LAVGDLERARHLLGHPYHISGHVIHGQKLGRTLGFPTMNLRVAERCAARSGIYVVQVYGL 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                  VA+ G  PT+   G +LLES + D + + YG+   V F   LR E KF D+  
Sbjct: 241 ADRPLPAVASLGVRPTVEDRGRVLLESHLLDETIDAYGKLVRVEFLQKLRDEEKFPDLPS 300

Query: 294 LKIYMGEDEKKARKILE 310
           L   + ED + AR    
Sbjct: 301 LTAAIAEDARNARAYFA 317


>gi|194290605|ref|YP_002006512.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224440|emb|CAQ70451.1| bifunctional: flavokinase; FAD synthetase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 385

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 98/309 (31%), Positives = 157/309 (50%), Gaps = 5/309 (1%)

Query: 5   HNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
             +++ + LPN        + IGNFDG+H GH  +L +A   A+    P+ V++F PHPR
Sbjct: 49  RPVKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPR 108

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                      ++    + + L + G   ++   F    A  S ++F++ VL   L  + 
Sbjct: 109 EFFTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAGQSPQEFVENVLWHGLHTRW 168

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  FRFG  RAGD   LQ+ G +YGF    +  + +     +SSS +R AL  G + 
Sbjct: 169 LLVGDDFRFGAKRAGDFAYLQEAGRRYGFDVEQMGSV-SEGGIRISSSAVRQALADGDLE 227

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          G
Sbjct: 228 HARRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVSGIFVVQVHGIADHPLPG 287

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA+ G  PT+   G +LLE  +FDF++ +YG+   V F   LR E +F  +++L   + +
Sbjct: 288 VASIGVRPTIEDAGRVLLEVHLFDFNESLYGKLVRVEFMKKLRDEARFDSLDELTAAIAK 347

Query: 301 DEKKARKIL 309
           D   AR   
Sbjct: 348 DSADARAFF 356


>gi|323527125|ref|YP_004229278.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1001]
 gi|323384127|gb|ADX56218.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1001]
          Length = 331

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G+++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFASLKAAGQQHGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG  + I   V+HG K+GR LGFPT N+Q++       G++ +R         
Sbjct: 177 LDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLQIAHKRPALAGIFVVRVHGVADEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|170768506|ref|ZP_02902959.1| riboflavin biosynthesis protein RibF [Escherichia albertii TW07627]
 gi|170122610|gb|EDS91541.1| riboflavin biosynthesis protein RibF [Escherichia albertii TW07627]
          Length = 295

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRSLPVMVMIFEPQPLELFATDKAPARLTRMREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   +++ A  LLG+ F I   V+HG
Sbjct: 122 LQKAGAEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLVLAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             + D   ++YG+   V     +R E +F  +++LK  +  DE  AR+    + P
Sbjct: 240 VHLLDVVMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIVRDELTAREFFGLTKP 294


>gi|83952835|ref|ZP_00961565.1| riboflavin biosynthesis protein RibF [Roseovarius nubinhibens ISM]
 gi|83835970|gb|EAP75269.1| riboflavin biosynthesis protein RibF [Roseovarius nubinhibens ISM]
          Length = 312

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 115/317 (36%), Positives = 171/317 (53%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +   +  +    +G  VAIGNFDG+HLGH  +++ A K     ++P+ VL+F PH
Sbjct: 1   MRIIRD---HSYVDAADRGASVAIGNFDGVHLGHQAVIDLARKAGEAADAPLGVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     +   LEK+G   L    F    +  S E+F + VL + L +
Sbjct: 58  PRQYFAPEAPPFRLMSAEARANRLEKLGVERLYELNFNAALSALSPEEFARNVLCDGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK R G+   L++ G + GF     + L  ++ + VSS+ IR AL++G 
Sbjct: 118 AHVVVGADFCFGKGRTGNAADLKRFGAEMGFGVTVAELLEGDQGE-VSSTAIRQALSEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   I+  V+ GE+ GR LG+PTANM ++     K GVYA++    D   +
Sbjct: 177 PRDAAAMLGHWHRIDGPVVGGEQRGRELGYPTANMSIAGLHPPKFGVYAVQIEVMDGPHK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P      P  LE+F+FDFS ++YG   +V+  DYLRPE  F  +E   
Sbjct: 237 GRYHGAASLGIRPMFNGEVP-NLETFLFDFSGDLYGAHLSVALADYLRPEEVFDSLEAFI 295

Query: 296 IYMGEDEKKARKILESS 312
             M  D  +AR+ILE+S
Sbjct: 296 AQMDADCARAREILEAS 312


>gi|209966830|ref|YP_002299745.1| riboflavin biosynthesis protein RibF [Rhodospirillum centenum SW]
 gi|209960296|gb|ACJ00933.1| riboflavin biosynthesis protein RibF [Rhodospirillum centenum SW]
          Length = 314

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 103/300 (34%), Positives = 163/300 (54%), Gaps = 9/300 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ +      L   L+G  VA+GNFDG+H GH  ++    + A        VL+F PH
Sbjct: 1   MKLYRH---TTDLAPELRGCAVALGNFDGVHRGHRAVIAATQEKAAALGGATVVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +   P F L+P  I+ +++E +G  AL    F    +  +AE+F++ VL++ L  
Sbjct: 58  PRSLFRPGDPPFRLTPFRIKARLIEALGVDALFVIHFDEAFSRRTAEEFVEHVLIQELGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG  R GD  +L++ GE+ GF    +  + +    + SS+ +R  L  G 
Sbjct: 118 AHVVAGYDFVFGHKRGGDMALLRRMGEERGFGVTEVRPVADAGGTVFSSTRVRELLQAGE 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
              A+ +LG+ F +E  V HG+K GRT+GFPTAN++L   +  + GVYA+     +    
Sbjct: 178 PQAASGILGHPFELEGRVEHGDKRGRTIGFPTANVELGEYLRPRFGVYAVLAGIDQGGGT 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + GVAN GR PT+  +    LE  +FDF  ++YG+   V    +LRPE+KF  ++ LK
Sbjct: 238 VWHKGVANLGRRPTVGGHVER-LEVHLFDFDGDLYGRHLRVQLLHFLRPELKFDGLDALK 296


>gi|288957464|ref|YP_003447805.1| FMN adenylyltransferase [Azospirillum sp. B510]
 gi|288909772|dbj|BAI71261.1| FMN adenylyltransferase [Azospirillum sp. B510]
          Length = 313

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 166/306 (54%), Gaps = 9/306 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M ++ +      LP   +G VVA+GNFDG+H GH  ++  A ++A     P  V++F PH
Sbjct: 1   MRLYRH---TADLPAEERGAVVALGNFDGVHRGHQAVIGTAQRLAAEMSVPSAVVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++ +   P F L+P  ++ + +E +G   LI   F     + +A+ F+ +VLV  L V
Sbjct: 58  PRSVFRPDDPPFRLTPFRVKTRHIEALGVDQLIVCHFDDGFRHKTAQAFVDEVLVGGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FG  R+GD   LQ  G   GF    +  + + +  + SS+ +R ALT G 
Sbjct: 118 RHVVCGYDFLFGHRRSGDPAFLQAAGHAQGFGVTEVGPVSDEQGGVYSSTRVRDALTAGR 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
              AAH+LG+ + IE  V+HG++ GRT+GFPTAN++L   +    GVYAIR    R  + 
Sbjct: 178 PREAAHVLGHPWEIEGRVVHGDQRGRTIGFPTANIELGEYLRPAFGVYAIRAGVDRGGET 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G  PT+       LE+ +FD   ++Y     V   D+LRPE+KF     LK
Sbjct: 238 VWLPGVANLGARPTV-DGTVARLEAHLFDVDLDLYDLHLRVRMIDFLRPEMKFPSFAALK 296

Query: 296 IYMGED 301
             + +D
Sbjct: 297 DQIVQD 302


>gi|83854824|ref|ZP_00948354.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. NAS-14.1]
 gi|83842667|gb|EAP81834.1| riboflavin biosynthesis protein RibF [Sulfitobacter sp. NAS-14.1]
          Length = 310

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 163/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G   AIGNFDG+HLGH  +++ A     ++P+ V++F PHPR
Sbjct: 1   MEIIRDYQF---VSASDQGATAAIGNFDGVHLGHRSVIDMARAALPDAPLGVVTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L+K+G   L    F    +  S   F Q+V+V+ L ++ 
Sbjct: 58  EYFAPDAPPFRLMGAEARAHQLQKIGVDKLYELGFDAALSGLSPRAFAQEVIVDGLGLRH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  FRFGK RAG    LQ  G + GF    I  L       VSS+ IR ALT+    
Sbjct: 118 VVVGADFRFGKARAGTAEQLQAFGAEMGFGVT-IAPLMAKGPDTVSSTAIRNALTEARPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   +E  ++HGEK GR LG+PTANM +        GVYA+     +      
Sbjct: 177 DAAAMLGHWHRVEGPILHGEKRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLEGPQAGR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N    LE+FIFDF  ++YG+  +V+  D+LR E KF +++ L   
Sbjct: 237 YHGVASLGVRPMFGEN-KANLETFIFDFKGDLYGKHVSVALVDHLRGEEKFDNLDALITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL +
Sbjct: 296 MDADSAQARSILAA 309


>gi|332557746|ref|ZP_08412068.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides WS8N]
 gi|332275458|gb|EGJ20773.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides WS8N]
          Length = 306

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++++    Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR
Sbjct: 1   MRIYNHW---QGLEASDRGASIAMGNFDGVHLGHQHVIDLAR---GRGPLGVVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   +   F L     +   L K+G   L    FT + A  + E F ++VL E L V  
Sbjct: 55  EVFAPNGEPFRLMNAEARANRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG+ RAG    L + G  +GF     D +   +   +SS+ IR ALT+G   
Sbjct: 115 VVVGADFCFGRGRAGTAEDLARLGCTHGFEVTVAD-ILTVEGTGISSTAIRAALTEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +V+HG+K GR LG+PTANM +S   L + GVYA++          S
Sbjct: 174 DAAAMLGHWHRIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG A+ G  P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   
Sbjct: 234 YSGAASLGVRPMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL S
Sbjct: 293 MDRDCARAREILGS 306


>gi|307730762|ref|YP_003907986.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1003]
 gi|307585297|gb|ADN58695.1| riboflavin biosynthesis protein RibF [Burkholderia sp. CCGE1003]
          Length = 331

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G++YGF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGARRAGDFASLKAAGQQYGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVTDEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|260913215|ref|ZP_05919697.1| riboflavin biosynthesis protein RibF [Pasteurella dagmatis ATCC
           43325]
 gi|260632802|gb|EEX50971.1| riboflavin biosynthesis protein RibF [Pasteurella dagmatis ATCC
           43325]
          Length = 312

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 160/313 (51%), Gaps = 6/313 (1%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFN 56
           M +     I    +LP +L G  + IGNFDG+HLGH  IL+   K AN  N P+ V+ F 
Sbjct: 1   MDILAVRLIRGIHNLPLNLSGCALTIGNFDGVHLGHQAILKHLRKKANELNLPVIVMLFE 60

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P PR           L     +   L K G   ++  +F    A  SAE+FI+  LV  L
Sbjct: 61  PQPREYFTGEDIPARLMRLRDKLHALAKAGVDYVLCIRFNQYFAELSAEKFIEDWLVNKL 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V+ +  G  FRFG  R GD  +LQ+ GE+ GF          +  + +SS+ IR AL  
Sbjct: 121 RVRFLSIGDDFRFGAKRQGDFSLLQQAGERLGFQVENNRSYCFHNLR-ISSTAIREALAN 179

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
             +  A+ +LG  ++I   V HG K+GRT+GFPTAN+ L   +   +GVY I+ R +   
Sbjct: 180 DDLSLASKMLGKPYSILGRVAHGNKLGRTIGFPTANIPLHRQVNPVKGVYVIKVRLKTGE 239

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + GVAN G  PT+      LLE+ +FDF ++IYGQ   +     +R E KF   ++LK 
Sbjct: 240 MFHGVANIGNRPTINGIVQ-LLEAHLFDFQRDIYGQCIEIELCHKIRNEQKFASFDELKQ 298

Query: 297 YMGEDEKKARKIL 309
            + +D + A+   
Sbjct: 299 QILKDVEFAKAFF 311


>gi|110680684|ref|YP_683691.1| riboflavin biosynthesis protein RibF [Roseobacter denitrificans OCh
           114]
 gi|109456800|gb|ABG33005.1| riboflavin biosynthesis protein RibF [Roseobacter denitrificans OCh
           114]
          Length = 310

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 167/314 (53%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +  +      +G   AIGNFDG+HLGH  +++ A  +A ++P+ +L+F PHPR
Sbjct: 1   MKILRDYQFVEP---EHRGASAAIGNFDGVHLGHQSVIDLARSVAPDAPLGILTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   LEK+G   L    F    A+ + E F  +V+ E   +K 
Sbjct: 58  AFFAPDAPPFRLMSREARASRLEKLGVDILYEVNFNAALASLTPEDFAVRVIHEGFGLKH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VI G  F FGK R+G    L++ G+  GF    +  L       VSS+ IR+AL+ G   
Sbjct: 118 VIVGADFCFGKGRSGTADDLRRFGQTMGFDVT-VAPLMARSDITVSSTAIRSALSAGKPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
            AA +LG+   IE  VI GE+ GR LG+PTANM +        GVYA+     D     S
Sbjct: 177 EAAEMLGHWHRIEGPVIGGEQRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLDGAHAGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N P  LE+FIFDFS ++YG   +V+  ++LRPE+KF  ++ L   
Sbjct: 237 YHGVASMGVRPMFGENRP-NLETFIFDFSGDLYGTPLSVALVEHLRPELKFDGLDALIAQ 295

Query: 298 MGEDEKKARKILES 311
           M +D   AR IL++
Sbjct: 296 MDQDSTAARTILDA 309


>gi|260771135|ref|ZP_05880062.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii CIP
           102972]
 gi|260613732|gb|EEX38924.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii CIP
           102972]
 gi|315179259|gb|ADT86173.1| riboflavin kinase/FMN adenylyltransferase [Vibrio furnissii NCTC
           11218]
          Length = 311

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L+Q  + A   N P  V++F P 
Sbjct: 1   MELIRGI---HNIKSRHHGCVLTIGNFDGVHLGHQQVLDQVAERAKALNLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+    L+   F    AN  A+ FI+ +LV  L V
Sbjct: 58  PMELFLKDKAPARLTRLRDKFVQLGKLNLDRLLCVNFNHHFANLDAQAFIRDLLVTRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG+ R G+  +L++ G +YGF  V        K + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGQGRKGNFAMLEQAGREYGFEVVSTQSFCLQKLR-VSSTAIREALAADA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +      +   
Sbjct: 177 LADAADMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGEQPI 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  +FDF   +YG++  V+    LR E KF+  E LK  +
Sbjct: 237 GGVANIGQRPTVNGV-RQQLEVHLFDFHGNLYGKQLEVALLHKLRNEHKFESFEALKQQI 295

Query: 299 GEDEKKARKILES 311
             D + AR  L  
Sbjct: 296 ELDAEAARVWLRQ 308


>gi|241663922|ref|YP_002982282.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           pickettii 12D]
 gi|240865949|gb|ACS63610.1| riboflavin biosynthesis protein RibF [Ralstonia pickettii 12D]
          Length = 332

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 162/316 (51%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + ++F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAGQTPDEFVRNVLVDGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFAYLQAAGAQFGFEVEQMGSV-SESGVRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVAGIFVVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHIFDYQANVYGKLVRVEFMKKLRDEARYDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
            +D   AR+    + P
Sbjct: 296 AQDCVHARQFFGLAVP 311


>gi|134094086|ref|YP_001099161.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Herminiimonas arsenicoxydans]
 gi|133737989|emb|CAL61034.1| bifunctional riboflavin biosynthesis protein RibF [Includes:
           Riboflavin kinase (Flavokinase); FMN adenylyltransferase
           (FAD pyrophosphorylase) (FAD synthetase)] [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 107/330 (32%), Positives = 171/330 (51%), Gaps = 14/330 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF  +    S         +AIGNFDG+H GH  +L +  ++A+   +   V++F PH
Sbjct: 1   MKVFRGLPNAAS----RAPCALAIGNFDGVHRGHQALLARLREVASKMGLESAVMTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR          S     ++    + + L   G   +I   F    A+ S ++F++K+LV
Sbjct: 57  PREFFAARAGDPSKAPTRIASLRDKLQSLATAGVDRVIVEHFNEHFASLSPQEFVEKILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L VK +I G  F +G  RAG+   L + G++YGFH      + ++ ++ +SSS IR A
Sbjct: 117 QGLHVKWLIVGEDFCYGAKRAGNVASLIEAGKQYGFHVESQATVTSSGAR-ISSSAIRKA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +G    A  LLG+ + +   VIHG+K+GRT+GFPT N+++        G+Y ++    
Sbjct: 176 LAQGDFAEAEVLLGHPYAMSGHVIHGKKLGRTIGFPTLNLRVGHKHPALSGIYIVQVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              +  GVA+ G  PT+  +G +LLE+ +FD+SQ+ YG+   V F   LR E K+ D+  
Sbjct: 236 ADDALPGVASIGIRPTVDDSGRVLLETHLFDYSQQCYGKLIRVEFLKKLRDEEKYIDLPT 295

Query: 294 LKIYMGEDEKKARKILE--SSYPLSERDRI 321
           L   +  D  +AR   +  +    S  DRI
Sbjct: 296 LTQAIERDAVQARTYFKQIADSATSATDRI 325


>gi|148556686|ref|YP_001264268.1| FMN adenylyltransferase / riboflavin kinase [Sphingomonas wittichii
           RW1]
 gi|148501876|gb|ABQ70130.1| FMN adenylyltransferase / riboflavin kinase [Sphingomonas wittichii
           RW1]
          Length = 313

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 114/307 (37%), Positives = 165/307 (53%), Gaps = 4/307 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
            +  ++ LP HL+G VVA+GNFDG H GH  ++  A+        P+ V SF+PHP    
Sbjct: 3   RLTCDRPLPEHLRGSVVALGNFDGFHRGHQAVVGAAVAHGRATGRPVLVASFDPHPVRFF 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +P F L+    +  + E+ G  A++ ++F  + A+ SA  F+   L+       V+T
Sbjct: 63  HPDAPPFRLTSLDQRAALFEQAGADAMLVFEFNRQLASVSAPDFVTDWLIGRAGAAHVVT 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FGK RAG+  +L + G  +G     I  + +     VSSS IR AL  G  + AA
Sbjct: 123 GEDFTFGKGRAGNVRVLAEIGGAHGLTAQAIGPVSDEGG-PVSSSRIREALVAGDPVEAA 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   F I+  V HG+K+GRT+GFPTAN+ +   +  K G+YA+R R  D     G AN
Sbjct: 182 RLLTRPFRIQGKVQHGDKLGRTIGFPTANIAMGRYLRPKYGIYAVRGRLPDGRVLDGAAN 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT  P    LLE++ FDF++ +Y Q   V    Y+RPE KF  +E L   M +D  
Sbjct: 242 LGVRPTFDPPKE-LLEAYFFDFAESLYDQCIEVEMIAYIRPEAKFDSLEALTAQMDKDCA 300

Query: 304 KARKILE 310
           +A++IL 
Sbjct: 301 EAKRILA 307


>gi|307155165|ref|YP_003890549.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
 gi|306985393|gb|ADN17274.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
          Length = 325

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 110/314 (35%), Positives = 167/314 (53%), Gaps = 23/314 (7%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQ---------AIKIANNSPI---TVLSFNPHPRTIIQ 64
           L    +A+GNFDGIHLGH  ++             K     P+   TV++F+PHPR    
Sbjct: 12  LTPTAIALGNFDGIHLGHQQVISSIWTKSSSSLVQKSREQDPLLHSTVVTFDPHPREFF- 70

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           S      L+P   + K+LE++G   L+   F  E A  S +QF++++LV+ L+   +  G
Sbjct: 71  SGQKTQCLTPLPEKVKLLEQIGIKQLVLLPFDRELAALSPQQFVEQILVQKLQAARICVG 130

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAA 183
             FRFG  RAG    L+     +G   +       N  +  +SSS IR AL  G++  A 
Sbjct: 131 EDFRFGHQRAGGASELEALASPFGIEVIITGLQTCNSEELRISSSRIRQALADGNIEAAK 190

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ------- 235
            +LG  +++   +I G+++GR +GFPTAN+ L    +L + GVY +R   +D        
Sbjct: 191 GMLGRPYSLTGTIIKGQQLGRKIGFPTANLDLPSHKLLPRYGVYCVRVEIEDDLTQDNPK 250

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           TS++GV N G  PT+   GP  +E  + D+S ++YG+  TVS   +LRPE KF  ++ LK
Sbjct: 251 TSFNGVMNIGYRPTVQGEGP-TVEVHLLDWSGDLYGKSLTVSLEQFLRPETKFPSLDALK 309

Query: 296 IYMGEDEKKARKIL 309
             + ED + ARKIL
Sbjct: 310 AQITEDCQLARKIL 323


>gi|260432847|ref|ZP_05786818.1| riboflavin biosynthesis protein RibF [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416675|gb|EEX09934.1| riboflavin biosynthesis protein RibF [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 310

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 113/315 (35%), Positives = 167/315 (53%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G   AIGNFDG+H+GH  +++ A K   ++P+ VL+F PHPR
Sbjct: 1   MQIIRDYKY---VDPEDRGASAAIGNFDGVHIGHQSVIDLARKACPDAPLGVLTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L   + +   LEK+G   L    F    A  + E+F + V+ + L +  
Sbjct: 58  EYFAPDAPPFRLMRGNARAHRLEKLGVQKLYELPFNAALAGLTPEEFARNVICQGLGLAH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R+G    + + G + GF    I  L      +VSS+ IR AL+ G   
Sbjct: 118 VVIGADFCFGKGRSGTAQDMVRFGRQMGFGVT-IAPLMQQSDHVVSSTAIRQALSDGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +VI GE+ GR LGFPTANM +      K GVYA+     D     S
Sbjct: 177 DAAAMLGHWHRIEGEVIGGEQRGRELGFPTANMSIEGIHPPKFGVYAVLVDVLDGPHAGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+F+FDFS ++YG   +V   ++LRPE+ F  ++ L   
Sbjct: 237 YHGAASVGVRPMFHGEVP-NIETFLFDFSGDLYGATLSVGLVEFLRPEMTFDGLDALIAQ 295

Query: 298 MGEDEKKARKILESS 312
           M ED  +ARKIL ++
Sbjct: 296 MTEDCDRARKILAAT 310


>gi|187929795|ref|YP_001900282.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           pickettii 12J]
 gi|187726685|gb|ACD27850.1| riboflavin biosynthesis protein RibF [Ralstonia pickettii 12J]
          Length = 332

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + ++F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAGQTPDEFVRNVLVDGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFAYLQAAGAQFGFEVEQMGSV-SESGVRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRRPAVAGIFVVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHIFDYQANVYGKLVRVEFMKKLRDEARYDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
            +D   AR+      P
Sbjct: 296 AQDCVHARQFFGLPVP 311


>gi|209517452|ref|ZP_03266293.1| riboflavin biosynthesis protein RibF [Burkholderia sp. H160]
 gi|209502106|gb|EEA02121.1| riboflavin biosynthesis protein RibF [Burkholderia sp. H160]
          Length = 352

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 4/309 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTI 62
           + + + LPN        + IGNFDG+H GH  +L   +A   A   P+ V++F PHPR  
Sbjct: 22  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAHVRAAAKARGLPVCVMTFEPHPREF 81

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +     ++    + + L   G   ++   F    A+ S + F+++++V  L  + ++
Sbjct: 82  FNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDTFVERIIVNGLHARWIM 141

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FR+G  RAGD   LQ  G++YGF    +  + +     +SSS +R AL  G +  A
Sbjct: 142 IGDDFRYGAKRAGDFASLQAAGKQYGFEVEQMATVADPSGARISSSGVRAALVAGDLDAA 201

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              LG  + I   V HG K+GR LGFPT N+ ++       G++ ++     +    GVA
Sbjct: 202 RAALGRDYLISGHVTHGMKLGRDLGFPTLNLPITHKRPALAGIFVVQVHGIAEQPLPGVA 261

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +  D 
Sbjct: 262 SLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLEMLTAAIARDV 321

Query: 303 KKARKILES 311
             AR    +
Sbjct: 322 ANARAWFAA 330


>gi|82703766|ref|YP_413332.1| riboflavin biosynthesis protein RibF [Nitrosospira multiformis ATCC
           25196]
 gi|82411831|gb|ABB75940.1| FMN adenylyltransferase / riboflavin kinase [Nitrosospira
           multiformis ATCC 25196]
          Length = 335

 Score =  335 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 21/326 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M + H   +    P       + IGNFDG+HLGH  +L +  K A+       V+ F PH
Sbjct: 1   MRISHGTPVQADAPV-----ALTIGNFDGVHLGHQAMLARLKKAADRLGVESCVMIFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++L   G   +   +F  + A   AE FI ++L   L  
Sbjct: 56  PREFFAPDKAPTRLTSLREKLELLAAAGVERVQICRFDFDFARIPAEDFIVRILQHGLAA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD  +L+    + GF    +     N    VSS+ +R AL  G 
Sbjct: 116 RWILVGDDFRFGARRAGDYEMLKAFSAECGFEVEDMPGFTVN-GLRVSSTAVREALAAGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF-------- 230
           +     LLG  ++I   V+ G+K+G+ +GFPTAN+QL  +     G++A+          
Sbjct: 175 LDLVKRLLGRFYSISGRVVDGDKLGKKIGFPTANIQLKHNRPPLAGIFAVEVEMEASGNE 234

Query: 231 -----RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
                      +  GVA+ G  PT+  +G  +LE  +FDF QEIYG+   V F   LR E
Sbjct: 235 TPPSLEVPSLDTLRGVASLGVRPTVHEHGKPVLEVHLFDFDQEIYGRHLRVHFLHKLRDE 294

Query: 286 IKFKDIEKLKIYMGEDEKKARKILES 311
            K+  +E L   +G D   A+    S
Sbjct: 295 EKYSGLEALTRQIGRDVDNAKNYFSS 320


>gi|256379824|ref|YP_003103484.1| riboflavin biosynthesis protein RibF [Actinosynnema mirum DSM
           43827]
 gi|255924127|gb|ACU39638.1| riboflavin biosynthesis protein RibF [Actinosynnema mirum DSM
           43827]
          Length = 310

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +  ++    +P      V+ +G+FDG+H GH  ++ +A++       P  V++F+PH
Sbjct: 1   MQRWRGLD---QIPGGWGRCVLTVGSFDGVHRGHQALIRRAVETAAERGVPSVVMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++E +G        FT E +   A++F+ +VLV+ L V
Sbjct: 58  PAEVVRPGSHPAKLTDLRRRAELVEALGVDVFCVVPFTPELSRMPADEFVHEVLVDRLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG   AG+ G+L++ G+++GF      +L ++     SS+  R  +  G 
Sbjct: 118 AAVVVGRNFTFGSRAAGNVGLLRELGQRFGF-VTEGADLLSDDGVTYSSTYTRACIDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG    +E  V+ G+  GR LGFPTANM L     +  +GVYA  F      +
Sbjct: 177 VAAAATALGRPHRLEGVVVRGDGRGRDLGFPTANMSLPESAAVPADGVYACWFVRDGHPT 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
                + G NPT        +E+++ DF  ++YGQ   + F   LR  +KF  +E L   
Sbjct: 237 MRAAVSVGTNPTF-SGKERRVEAYVLDFDDDLYGQTVALDFVARLRGMVKFDGVEALVEQ 295

Query: 298 MGEDEKKARKIL 309
           M  D   AR  L
Sbjct: 296 MHRDVADARVQL 307


>gi|163857124|ref|YP_001631423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           petrii DSM 12804]
 gi|163260852|emb|CAP43154.1| riboflavin biosynthesis protein [Bordetella petrii]
          Length = 321

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 159/317 (50%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M    ++  +   P       + IGNFDG+H GH  IL +  + A    +  TV++F PH
Sbjct: 1   MKTSLHLYRSAPPPAQRTPCALTIGNFDGVHRGHQAILARVRQAARERGLLPTVMTFEPH 60

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +S    + + L   G + ++  +F    A  SA  FI+ +LV
Sbjct: 61  PREYFAALNQRPELAPTRISGLRDKLEALACQGMAQVVIERFNARLAEMSANAFIEDLLV 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L+ + ++ G  FRFG+ R+GD  +L++ G  +GF    + ++ +     VSSS +RTA
Sbjct: 121 ARLQTRWLLVGEDFRFGRKRSGDIDLLREAGMMHGFEVQTLADITDRHGHRVSSSEVRTA 180

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  A  LLG  + I   VIHG+K+GRTLGFPT N++++P    + G+Y +R    
Sbjct: 181 LAVGDLARAQDLLGRPYQISGHVIHGQKLGRTLGFPTLNLRVAPRCAARSGIYVVRAHGL 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                  VA+ G  PT+  +G +LLE+ + D   + YG+   V F   LR E KF D+  
Sbjct: 241 GAQPRPAVASLGVRPTVEDHGRVLLEAHLLDGPADAYGKLVRVEFLHKLRDEEKFPDLPS 300

Query: 294 LKIYMGEDEKKARKILE 310
           L   + ED + AR    
Sbjct: 301 LTAAIAEDARNARAYFA 317


>gi|109899484|ref|YP_662739.1| riboflavin biosynthesis protein RibF [Pseudoalteromonas atlantica
           T6c]
 gi|109701765|gb|ABG41685.1| FMN adenylyltransferase [Pseudoalteromonas atlantica T6c]
          Length = 308

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 110/311 (35%), Positives = 167/311 (53%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L +  +G V+ IG FDG+HLGH  +L Q +  A     P TV+ F P 
Sbjct: 1   MELVRGL---HNLRDKHRGCVLTIGKFDGVHLGHQAVLSQVVVKARELGLPATVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    LS    +   L+ +G   L+  KF    A+++AEQF++++LV+ L V
Sbjct: 58  PEELFTPDNAPARLSLLRDKYVQLKALGVDRLLCLKFDKRFASFTAEQFVEQLLVKDLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFGK R G+  +LQ  G K GF  V     R    + +SS+ +R AL++ +
Sbjct: 118 QFLVVGDDFRFGKGRVGNFAMLQVEGRKCGFSVVSTQSFRLEDCR-ISSTEVRNALSENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  FTI   V+HG+K GRT+GFPTAN+ L        GV+A++       +Y
Sbjct: 177 FSLAEKMLGRPFTISGKVLHGDKKGRTIGFPTANLLLKRCNAPINGVFAVQVDIAG-KAY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           SGVAN G  PT+       LE  IF F+  +YG   +V+    LR EIKF   E+L   +
Sbjct: 236 SGVANIGTRPTVN-GQRSQLEVHIFHFTGNLYGHFISVAIKAKLRNEIKFDSFEQLHQQI 294

Query: 299 GEDEKKARKIL 309
             D ++A+++L
Sbjct: 295 QRDAEQAKQLL 305


>gi|154251097|ref|YP_001411921.1| riboflavin biosynthesis protein RibF [Parvibaculum lavamentivorans
           DS-1]
 gi|154155047|gb|ABS62264.1| riboflavin biosynthesis protein RibF [Parvibaculum lavamentivorans
           DS-1]
          Length = 312

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 123/317 (38%), Positives = 176/317 (55%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +  + E    +P  L+G V A+GNFDG+HLGH  ++ +A ++A     P+ VL F PH
Sbjct: 1   MQIIRHYE---HVPPGLRGAVYALGNFDGVHLGHQQVIGKAAEVARELGAPLGVLVFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+       P F L+P   + ++LE +G   L    F    A   A +F+  VLV  L  
Sbjct: 58  PQQFFFPERPFFRLTPFRAKARLLEGLGVDILAALPFDAHMAQKLAPEFVLDVLVNGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  FRFGK R GD   L   GE  GF    ++E++       SS+ IR  L KG 
Sbjct: 118 VHIVAGYDFRFGKGRGGDVAALSYMGEMEGFGVSIVEEVQA-GGVTYSSTRIRELLAKGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
              AA LLG+ +T+E+ +  G++ GRT+GFPTAN+ L   +    GVYA++   +D   +
Sbjct: 177 PRGAADLLGHWWTVETHIQQGDQRGRTIGFPTANLPLGDHVQPALGVYAVKVEIEDGPHK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +Y+GVANFGR PT      +LLE  IFDF  ++YG    +SF +YLRPE KF  +E LK
Sbjct: 237 GTYNGVANFGRRPTF-DKQDVLLEVHIFDFDGDLYGVHAAISFIEYLRPEQKFDGLESLK 295

Query: 296 IYMGEDEKKARKILESS 312
             + +D +KAR +L  S
Sbjct: 296 AQIAKDSEKARTLLAGS 312


>gi|163732286|ref|ZP_02139732.1| riboflavin biosynthesis protein RibF [Roseobacter litoralis Och
           149]
 gi|161394584|gb|EDQ18907.1| riboflavin biosynthesis protein RibF [Roseobacter litoralis Och
           149]
          Length = 310

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 115/314 (36%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +  +      +G   AIGNFDG+HLGH  +++ A  +A ++P+ +L+F PHPR
Sbjct: 1   MKILRDYQFVEP---EHRGASAAIGNFDGVHLGHQSVIDLARSVAPDAPLGILTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L+K+G   L    F    A+ + E F  +V+ E   +K 
Sbjct: 58  AFFAPDAPPFRLMSREARASRLDKLGVDILYEVNFNAALASLTPEDFAARVIHEGFGLKH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           VI G  F FGK R+G    L++ G+  GF    +  L       VSS+ IR+AL+ G   
Sbjct: 118 VIVGADFCFGKGRSGTADDLKRFGQTMGFDVT-VAPLMARSDITVSSTAIRSALSAGKPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
            AA +LG+   IE  VI GE+ GR LG+PTANM +        GVYA+     D     S
Sbjct: 177 EAAEMLGHWHRIEGPVIGGEQRGRELGYPTANMSIDGLHPPAFGVYAVLVDVLDGAHAGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVA+ G  P    N P  LE+FIFDFS ++YG   +V+  ++LRPE+KF  ++ L   
Sbjct: 237 YHGVASMGVRPMFGENRP-NLETFIFDFSGDLYGTPLSVALVEHLRPELKFDGLDALIAQ 295

Query: 298 MGEDEKKARKILES 311
           M +D   AR IL +
Sbjct: 296 MDQDSTAARTILGA 309


>gi|332305531|ref|YP_004433382.1| riboflavin biosynthesis protein RibF [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172860|gb|AEE22114.1| riboflavin biosynthesis protein RibF [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 312

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 5/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           +    +L +  +G V+ IG FDG+HLGH  +L Q +  A     P TV+ F P P  +  
Sbjct: 8   VRGLHNLRDRHRGCVLTIGKFDGVHLGHQAVLSQLVVKARELGLPATVMVFEPQPEELFT 67

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +    LS    +   L+ +G   L+  KF    A+++AEQF++++LVE L V+ ++ G
Sbjct: 68  PDNAPARLSLLRDKYVQLKALGVDRLLCLKFDKRFASFTAEQFVEQLLVEDLGVQFLVVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFGK R G+  +LQ  G+K GF  V     R +  + +SS+ +R AL++ +   A  
Sbjct: 128 DDFRFGKGRVGNFAMLQAEGQKCGFSVVSTQSFRLDDYR-ISSTEVRKALSEDNFTLAEK 186

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  FTI   V+HG+K GRT+GFPTAN+ L        GV+A++      T YSGVAN 
Sbjct: 187 MLGRPFTISGKVLHGDKKGRTIGFPTANLLLKRCNAPINGVFAVQVDIAG-TIYSGVANI 245

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+       LE  IF F+  +YG+  +V+    LR EIKF   E+L   +  D ++
Sbjct: 246 GTRPTVN-GQRSQLEVHIFHFTGNLYGRFISVAIRAKLRNEIKFDSFEQLHQQILRDAEQ 304

Query: 305 ARKIL 309
           A+++L
Sbjct: 305 AKQLL 309


>gi|309781489|ref|ZP_07676225.1| riboflavin biosynthesis protein RibF [Ralstonia sp. 5_7_47FAA]
 gi|308919902|gb|EFP65563.1| riboflavin biosynthesis protein RibF [Ralstonia sp. 5_7_47FAA]
          Length = 332

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  + ++F++ VLV+ L  
Sbjct: 57  PREFFTPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPDEFVRNVLVDGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFTYLQAAGAQFGFEVEQMGSV-SESGIRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVAGIFVVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  IFD+   +YG+   V F   LR E ++  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHIFDYHASVYGKLVRVEFMKKLRDEARYDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
            +D   AR+      P
Sbjct: 296 AQDCVHARQFFGLPVP 311


>gi|300703296|ref|YP_003744898.1| riboflavin kinase/ fmn adenylyltransferase [Ralstonia solanacearum
           CFBP2957]
 gi|299070959|emb|CBJ42267.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Ralstonia
           solanacearum CFBP2957]
          Length = 332

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +A   A+    P+TV++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           ++    + + L + G   ++   F    A  +  +F++ VLV+ L  
Sbjct: 57  PREFFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPAEFVRNVLVDGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWLLVGDDFRFGAKRAGDFTHLQAAGAQFGFEVEQMGSV-SESGIRISSSAVREALAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +   
Sbjct: 176 LEHARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +G +LLE  IFD+    YG+   V F   LR E +F  ++ LK  +
Sbjct: 236 PAVASIGVRPTVDDSGRVLLEVHIFDYHANAYGKLVRVEFMKKLRDEARFDSLDALKDAI 295

Query: 299 GEDEKKARKILESSYP 314
             D   AR     + P
Sbjct: 296 ARDCVDARHFFGLALP 311


>gi|117619272|ref|YP_855223.1| riboflavin biosynthesis protein RibF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560679|gb|ABK37627.1| riboflavin biosynthesis protein RibF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 324

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 106/311 (34%), Positives = 160/311 (51%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GHH +L +  + A     P  V+ F P 
Sbjct: 1   MELIRGI---HNIKPRHRGCVLTIGNFDGVHQGHHAVLFRLQEKAAQLGLPACVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   ++    LS    + + L+ M    ++  +F    A  SA  FI+++LVE L V
Sbjct: 58  PLELFAGAAAPARLSRLREKYEALKGMQIDRMLCVRFNHRFAEQSATTFIEQLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  FRFGK R GD  +L++ G ++GF  +     + ++ Q VSS+ +R AL  G 
Sbjct: 118 HYLVVGDDFRFGKGREGDFHLLEEAGRRFGFEVISTQSFQLSR-QRVSSTLVREALAAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     +LG  +TI   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T +
Sbjct: 177 MAEVELMLGRPYTISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVLCSGKT-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDFS ++YGQ+  V     LR E KF     LK  +
Sbjct: 236 PGVANVGVRPTL-SGTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFASFTALKEQI 294

Query: 299 GEDEKKARKIL 309
             D   AR   
Sbjct: 295 ERDALAARAWF 305


>gi|119946878|ref|YP_944558.1| bifunctional riboflavin kinase and FMN adenylyltransferase
           [Psychromonas ingrahamii 37]
 gi|119865482|gb|ABM04959.1| riboflavin kinase / FMN adenylyltransferase [Psychromonas
           ingrahamii 37]
          Length = 310

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 110/310 (35%), Positives = 170/310 (54%), Gaps = 7/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V++IGNFDG+HLGH  +L + +  A     P TVL+F P 
Sbjct: 1   MELLRGI---HNIKASHQGCVLSIGNFDGVHLGHKAVLSRLLFEAKRLKVPATVLTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    LS    +   L+++G   L+   F  + AN SA++FI+++L++ L V
Sbjct: 58  PAELFSGENAPARLSRLRDKFVQLDQLGLDRLLCVSFNRKFANLSAQEFIEELLIKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG  R GD  +L+K GEKYGF  V    L   + + +SSS IR AL  G 
Sbjct: 118 KFLVIGDDFHFGYQRKGDFELLKKAGEKYGFEVVDTHSLTQQEYR-ISSSRIRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG +++I   V+HG K+GRT+G PTAN+ L   +    GV+ +         Y
Sbjct: 177 MRQAALMLGRKYSITGRVVHGRKLGRTIGVPTANLLLKRRVSPVSGVFVVSVLGIGNQIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+       LE  IF+F+  +YG +  V   + +R E++F    +LKI +
Sbjct: 237 QGVANIGQRPTVQGV-RQQLEVHIFNFNANLYGLQLEVVLEEKIRDEVRFDSFAELKIQI 295

Query: 299 GEDEKKARKI 308
            +D K+AR+ 
Sbjct: 296 DKDIKQARQW 305


>gi|77462855|ref|YP_352359.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides 2.4.1]
 gi|77387273|gb|ABA78458.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 306

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 122/314 (38%), Positives = 174/314 (55%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++++    Q L    +G  +A+GNFDG+HLGH  +++ A       P+ V++F PHPR
Sbjct: 1   MRIYNHW---QGLEASDRGASIAMGNFDGVHLGHQHVIDLAR---GRGPLGVVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +   +   F L     +   L K+G   L    FT + A  + E F ++VL E L V  
Sbjct: 55  EVFAPNGEPFRLMNAEARGNRLAKLGVERLYELPFTRDLAALTPEDFAREVLAEGLGVTH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ GT F FG+ RAG    L + G  +GF     D +   +   +SS+ IR ALT+G   
Sbjct: 115 VVVGTDFCFGRGRAGTAEDLARLGRTHGFEVTVAD-ILTVEGTGISSTAIRAALTEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +V+HG+K GR LG+PTANM +S   L + GVYA++          S
Sbjct: 174 DAAAMLGHWHRIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPLAGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG A+ G  P    N P  LESF+FDFS ++YGQ  +V+F DYLRPE+ F  +  L   
Sbjct: 234 YSGAASLGVRPMFGENRP-NLESFLFDFSGDLYGQHLSVAFVDYLRPELVFDGLPALIAQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR+IL S
Sbjct: 293 MDRDCARAREILGS 306


>gi|221199258|ref|ZP_03572302.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2M]
 gi|221205840|ref|ZP_03578855.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2]
 gi|221174678|gb|EEE07110.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2]
 gi|221180543|gb|EEE12946.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD2M]
          Length = 330

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +RTAL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRTALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LEAAASALGHSYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
            +D   AR          ERDR
Sbjct: 297 AQDVANARAYF------IERDR 312


>gi|170693572|ref|ZP_02884730.1| riboflavin biosynthesis protein RibF [Burkholderia graminis C4D1M]
 gi|170141354|gb|EDT09524.1| riboflavin biosynthesis protein RibF [Burkholderia graminis C4D1M]
          Length = 331

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 148/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L      A     P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLAHVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRTNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G+ YGF    +  + +     +SSS +R AL  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFTSLKAAGQHYGFEVEQMATVADPSGARISSSGVRAALVAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAARAALGRDYLISGHVVHGMKLGRDLGFPTLNLPIAHKRPALAGIFVVRVHGVTDEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKYVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D   AR    +
Sbjct: 297 ARDVANARAWFAA 309


>gi|332289397|ref|YP_004420249.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Gallibacterium anatis UMN179]
 gi|330432293|gb|AEC17352.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Gallibacterium anatis UMN179]
          Length = 312

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 108/315 (34%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +LP    G  + IGNFDG+HLGH  IL    + A     P  V+ F P 
Sbjct: 1   MRLIRGL---YNLPTFPNGCALTIGNFDGVHLGHQTILRHLKQKAQQLGLPTVVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            +           L     +   L + G   +    F    A  SAEQFIQ  L+E L V
Sbjct: 58  AKEFFLKQKAPARLMRLRDKLTALAQFGIDYVFCVPFNAAFAQQSAEQFIQHYLIEKLRV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG +R+G+   LQK G++YGF             Q VSS+ IR AL +  
Sbjct: 118 KFLSVGDDFRFGINRSGNFATLQKAGKQYGFQVENNASYC-LAQQRVSSTAIREALAQDK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     +LG  ++I   V+HG ++GRT+GFPTAN+ L  ++   +GVYA+  + +    Y
Sbjct: 177 LEQVEQMLGRPYSILGRVVHGNELGRTIGFPTANIGLHRNVNPIQGVYAVEVKDKANHHY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+    P LLE  +FDF+ ++YGQ   + F   LR EIKF     L+  +
Sbjct: 237 YGVANVGNRPTINGFKP-LLEVHLFDFNGDLYGQTLEIFFKLKLRSEIKFPSFVALQQQI 295

Query: 299 GEDEKKARKILESSY 313
             D + A++  + + 
Sbjct: 296 KLDAENAKRYFQQNR 310


>gi|33592822|ref|NP_880466.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           pertussis Tohama I]
 gi|33572470|emb|CAE42040.1| riboflavin biosynthesis protein [Bordetella pertussis Tohama I]
 gi|332382235|gb|AEE67082.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           pertussis CS]
          Length = 321

 Score =  335 bits (859), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 157/317 (49%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M     I      P+      + IGNFDG+HLGH  IL +  + A    +   V++F PH
Sbjct: 1   MKPSLRIYRYPPPPSQRTPCALTIGNFDGVHLGHQAILARVRQEARARGLVPAVMTFEPH 60

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +S    + + L   G   ++  +F    A  SA  FI+ +LV
Sbjct: 61  PREYFATLNRRPELAPTRISGLRDKLQALAAAGIEQVVVERFDARLAEMSANAFIEDLLV 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L+ + ++ G  FR+G  R+GD  +L++ G  +GF    + ++ + +   +SSS +RTA
Sbjct: 121 AGLQTRWLLVGEDFRYGHKRSGDIDLLREAGLTHGFEVCTLADITDRQGHRISSSEVRTA 180

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  AA LLG  F I   VIHG+K+GR LGFPT N++++P    + G+Y +R    
Sbjct: 181 LAVGDLDRAAQLLGQPFHISGHVIHGQKLGRELGFPTMNLRVAPRCATRSGIYVVRVLGL 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                  VA+ G  PT+   G +LLE+ + D S + YG+   V F   LR E KF D+  
Sbjct: 241 QDRPLPAVASLGVRPTVEDRGRVLLEAHLLDESLDAYGKLVRVEFLHKLRDEEKFADLPS 300

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D + AR    
Sbjct: 301 LTAAIAQDAQNARAYFA 317


>gi|330831174|ref|YP_004394126.1| riboflavin kinase/FMN adenylyltransferase [Aeromonas veronii B565]
 gi|328806310|gb|AEB51509.1| Riboflavin kinase/FMN adenylyltransferase [Aeromonas veronii B565]
          Length = 324

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    +L    +G V+ IGNFDG+H GHH +L +  + A     P  V+ F P 
Sbjct: 1   MELIRGI---HNLKPRHRGCVLTIGNFDGVHQGHHAVLARLKEKAAQLGLPACVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   ++    LS    + + L+ +    ++  +F+   A  +A  FI+++LVE L V
Sbjct: 58  PLELFAGTAAPARLSRLREKYEALQGLHIDRMLCVRFSHRFAEQAASTFIEQLLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFGK R GD  +L++ G ++GF  +     + ++ Q VSS+ +R AL  G 
Sbjct: 118 RYLVVGDDFRFGKGREGDFHLLEEAGHRFGFEVISTQSFQLSR-QRVSSTLVREALKAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     +LG  + I   V HG+K+GRT+GFPTAN+ L   ++   GV+A+      +T +
Sbjct: 177 MAEVELMLGRPYAISGRVAHGDKLGRTIGFPTANLALKRQVIPVGGVFAVEVICSGKT-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FDFS ++YGQ+  V     LR E KF     LK  +
Sbjct: 236 PGVANVGVRPTL-SGTQARLEVHLFDFSGDLYGQQVKVLLRHKLREEQKFDSFSALKEQI 294

Query: 299 GEDEKKARKIL 309
             D   AR   
Sbjct: 295 ERDALAARAWF 305


>gi|163745708|ref|ZP_02153068.1| riboflavin biosynthesis protein RibF [Oceanibulbus indolifex
           HEL-45]
 gi|161382526|gb|EDQ06935.1| riboflavin biosynthesis protein RibF [Oceanibulbus indolifex
           HEL-45]
          Length = 310

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 118/314 (37%), Positives = 163/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    LP+  +G   AIGNFDG+HLGH  ++E A + A  +P+ V++F PHPR
Sbjct: 1   MRIIRDYQ-FVDLPD--RGATAAIGNFDGVHLGHRSVIELAQRAAPEAPLGVVTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   LEK+G   L    F    A+ S E F + VL E L +  
Sbjct: 58  EYFAPDAPPFRLMGREARAHRLEKIGVERLYELAFNGTLASLSPEAFARDVLHEGLGLAH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK RAG    L + G++YGF    I  L       VSS+ IR AL+ G   
Sbjct: 118 VVVGADFCFGKGRAGTADDLVRFGDQYGFGVT-IAPLMERDELTVSSTAIREALSGGETR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
            AA +LG+   I+  VI GE+ GR LGFPTANM +        GVYA+     +   + S
Sbjct: 177 EAAAMLGHWHRIDGPVISGEQRGRELGFPTANMSIDGLHPPAFGVYAVLVDVLEGPHKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    N    LE+++FDF  ++YG   +V   ++LR E KF  +E L   
Sbjct: 237 YHGAASIGVRPMFGEN-KANLETYLFDFKGDLYGAPLSVGLVEHLRGEEKFDSLEALITQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR ILE+
Sbjct: 296 MDADCTRARAILEA 309


>gi|120403339|ref|YP_953168.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956157|gb|ABM13162.1| riboflavin kinase / FMN adenylyltransferase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 324

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      VV IG FDG+H GH  ++ +A+K   +   P+ +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVVTIGVFDGVHRGHQELISRAVKAGRSRGVPVVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + E++I ++LVE L V
Sbjct: 58  PMEVVFPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTSDFMKLTPERYIHELLVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+  +L+K GE++GF       + E   +++   SS+ IR+ + 
Sbjct: 118 VEVLVGENFTFGKKAAGNVDLLRKAGERFGFAVDSLSLVAEHHQDETVAFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ AA  LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAAEALGRPHRVEGVVVRGDGRGRVLGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D S ++YGQ   V F   LR 
Sbjct: 238 HSPVVGTVTPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVARLRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF  +  L   MG D ++AR +L +
Sbjct: 297 QEKFDSVADLVTAMGADTERARALLSA 323


>gi|254490428|ref|ZP_05103614.1| riboflavin biosynthesis protein RibF [Methylophaga thiooxidans
           DMS010]
 gi|224464172|gb|EEF80435.1| riboflavin biosynthesis protein RibF [Methylophaga thiooxydans
           DMS010]
          Length = 293

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 101/293 (34%), Positives = 151/293 (51%), Gaps = 4/293 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             IGNFDG+HLGH  +L Q     +    P  V++F P P            L+    + 
Sbjct: 2   ATIGNFDGVHLGHQAVLSQLAMKGDMLRLPAVVITFEPQPFEYFVPEKAPARLTRFREKV 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L       L   +F    A  +AE+FIQK+LVE L V+ ++ G  FRFG+ R GD  +
Sbjct: 62  EALRAFSIQQLCVLRFNQALARMTAEEFIQKLLVEGLNVRYLVVGDDFRFGRHRHGDFAM 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ+ G++YGF  V +        + VSS+ IR AL  G +  A  LLG  + +   V HG
Sbjct: 122 LQQAGKQYGFQVVNMHTFAIEHDR-VSSTRIRDALRDGDLEMAEKLLGRPYRMSGRVAHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +K GR +GFPTAN+ L    +   GV+A++    ++   +GVAN G  PT+  N   LLE
Sbjct: 181 DKRGRKMGFPTANIHLHRCKIPLTGVFAVQLFGLEEEPVNGVANIGIRPTIGGN-KALLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +FDF ++IYG+   V F   +R E +F  ++ L   +  D ++A+    + 
Sbjct: 240 VHLFDFKRDIYGEHVQVHFLHKIRDEQRFDGLDALIAQIEIDCEQAKTFFAAK 292


>gi|298485391|ref|ZP_07003481.1| Riboflavin kinase / FMN adenylyltransferase [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160089|gb|EFI01120.1| Riboflavin kinase / FMN adenylyltransferase [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 308

 Score =  334 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 146/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A        V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVLSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPGIAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKTW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV+F   LR E  F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQLFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|73542429|ref|YP_296949.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Ralstonia
           eutropha JMP134]
 gi|72119842|gb|AAZ62105.1| FMN adenylyltransferase / riboflavin kinase [Ralstonia eutropha
           JMP134]
          Length = 347

 Score =  334 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 159/318 (50%), Gaps = 5/318 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 13  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 72

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    + + L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 73  FTPDKAPTRIALLRDKLESLRRNGVDRVVVEHFNAHFAGQSPQAFVENVLWHGLHARWVL 132

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ  G ++GF    +  + +     +SSS +R AL  G + +A
Sbjct: 133 VGDDFRFGAKRAGDFTYLQDAGRRFGFDVEQMGSV-SEGGIRISSSAVRQALADGDLEHA 191

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 192 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVNGIFVVQVHGIADHPVPGVA 251

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+   G +LLE  +FD ++ +YG+   V F   LR E +F ++E L   + +D 
Sbjct: 252 SIGVRPTIEDAGRVLLEVHLFDINENLYGKLIRVEFMKKLRDEARFDNLEDLTAAIAKDS 311

Query: 303 KKARKILESSYPLSERDR 320
            +AR     + P +   R
Sbjct: 312 AEARAFFGLTAPDAHTGR 329


>gi|172035873|ref|YP_001802374.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
 gi|171697327|gb|ACB50308.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
          Length = 308

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 166/309 (53%), Gaps = 6/309 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           N+ +  S  N +    +A+GNFDGIHLGH  +L+  +++      T+++F PHP+     
Sbjct: 2   NVWVTSSTSNVITPTAIALGNFDGIHLGHRQVLKPILELQKQYTPTIVTFTPHPQEFFSG 61

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    L+P + + K+LE +    L+R  F    A+ S + F++ +LV+ L  K +  G 
Sbjct: 62  QTR-QLLTPLTEKVKLLESLNVKQLVRLPFDRSLASLSPQAFVEDILVKQLNAKYISVGE 120

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALTKGHVLNA 182
            FRFGK RAG+  ILQ+  +++G           L  +    +SSS IR  L  G+V  A
Sbjct: 121 DFRFGKGRAGNAQILQELAQQFGVFVHITKLQTCLNKDDPLRISSSRIRQCLATGNVRQA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGV 241
             +LGY +++E  V+ G+++GRT+GFPTAN+Q+    +L + GVY +R     +    GV
Sbjct: 181 KEMLGYSYSLEGIVVKGQQVGRTIGFPTANLQVPLDKLLPRRGVYCVRALLTTEEVVKGV 240

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PT+    P  +E  + D+S  +Y     V    +LR E KF  ++ LK  + +D
Sbjct: 241 INIGSRPTVNGQVP-TVEVHLLDWSGNLYRTFVKVQLDKFLRSEQKFPSLDALKNQIKQD 299

Query: 302 EKKARKILE 310
              AR+ILE
Sbjct: 300 CIIARQILE 308


>gi|326334501|ref|ZP_08200712.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325693270|gb|EGD35198.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 307

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 114/296 (38%), Positives = 176/296 (59%), Gaps = 7/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   + IG FDGIH+GH  I+ Q +  A    +  TVL+F PHPR ++  S+PI  +   
Sbjct: 14  KESALTIGTFDGIHIGHQRIIAQVVDTARQRHLIPTVLTFFPHPRMVLNPSAPIALIQTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LEK G   L+   F  E A+ +AE ++++VLV+ L+ K +I G   RFGK+R+ 
Sbjct: 74  EERANLLEKYGIEQLVIQPFDKEFASLTAEDYVKEVLVKKLKAKVIIIGYDHRFGKNRSA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  GE+Y F  + I  ++   S  VSS+ IR+AL +G++  A H LGY F++   
Sbjct: 134 GIEELKAFGEQYHFEVIEI-PVQEVDSLSVSSTKIRSALNQGNIKQATHYLGYPFSLSGK 192

Query: 196 VIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG+KIGRTLG+PTAN+Q++    ++ K GVYA+    + +  Y G+ + G+NPT+   
Sbjct: 193 VVHGQKIGRTLGYPTANIQVANTHKLIPKIGVYAVYSIIEGKKIY-GMLSIGKNPTIEGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           G   +E + FDF +++YG+   V F  +LR E+KF  +E LK  +  DE  AR+  
Sbjct: 252 GE-SIEVYFFDFDKDLYGKEIRVYFVAFLREEVKFHSLEALKTQLKMDENIARQYF 306


>gi|159045467|ref|YP_001534261.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
 gi|157913227|gb|ABV94660.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
          Length = 317

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 118/315 (37%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  + E  +      +G   AIGNFDG+HLGH  IL +  +IA   ++P+ V++F PH
Sbjct: 2   MRIVRDAEYVRP---EDRGACAAIGNFDGVHLGHQSILTRTREIAQTLDAPVGVMTFEPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L   + +   LEK+    L +  F    A  +   F Q +LV+ L +
Sbjct: 59  PREYFAPEAPPFRLMSETAKAHRLEKLDVDILYQLPFDASLAGLTPRDFAQCILVDALGL 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + VI G  F FGK R G    L+  G + GF     D L++N S +VSS++IRTAL +G 
Sbjct: 119 RHVIVGADFCFGKGRKGTAENLRSFGAEMGFGVTIADLLQDN-SLVVSSTSIRTALAEGR 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   I+  V HGEK GRTLG+PTANM ++     K GVYA+     D    
Sbjct: 178 PEDAARMLGHWHRIDGPVEHGEKRGRTLGYPTANMSIAGLHPPKFGVYAVLVDVLDGPHA 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P      P  +E+F+FDF  ++YG + +V+   +LRPE  F  ++ L 
Sbjct: 238 GHYHGAASMGVRPMFGGAVP-NIETFLFDFKGDLYGAQLSVALVSFLRPEANFDGLDALI 296

Query: 296 IYMGEDEKKARKILE 310
             M  D  KAR IL 
Sbjct: 297 AQMDADCAKARDILA 311


>gi|161523964|ref|YP_001578976.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|189351275|ref|YP_001946903.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|221211479|ref|ZP_03584458.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD1]
 gi|160341393|gb|ABX14479.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans ATCC
           17616]
 gi|189335297|dbj|BAG44367.1| riboflavin kinase [Burkholderia multivorans ATCC 17616]
 gi|221168840|gb|EEE01308.1| riboflavin biosynthesis protein RibF [Burkholderia multivorans
           CGD1]
          Length = 330

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +RTAL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRTALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LEAAASALGHSYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
            +D   AR          ERDR
Sbjct: 297 AQDVANARAYF------IERDR 312


>gi|299134231|ref|ZP_07027424.1| riboflavin biosynthesis protein RibF [Afipia sp. 1NLS2]
 gi|298590978|gb|EFI51180.1| riboflavin biosynthesis protein RibF [Afipia sp. 1NLS2]
          Length = 328

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 119/316 (37%), Positives = 173/316 (54%), Gaps = 10/316 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            + H+      +P   +G V+A+GNFDG+HLGH  ++  A KIA         LSF PHP
Sbjct: 7   QIIHDTTPPADIP---RGAVIALGNFDGVHLGHRTVIAAAQKIAKSAGQKAFALSFEPHP 63

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R+    ++  F L+    + ++L   G    +   F    A  SA+ FI + LV  L V 
Sbjct: 64  RSFFNPAAAHFRLTNEQAKLRLLAGTGLDGAVVLDFNAARAATSAQDFINQELVRRLGVS 123

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FGK R+G    L ++GE+ G     I    +     +SSS IR +L +G +
Sbjct: 124 GISVGDDFHFGKGRSGSPATLAEQGERLGIKV-HIQSHVDLSGLPISSSAIRASLAEGRI 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---DQT 236
            +A  +LG  + +   VI GEK GR LG+PTAN++L P + LK G+YA+R       D  
Sbjct: 183 RDATAMLGGPWFVSGTVIPGEKRGRELGYPTANIRLDPHVDLKHGIYAVRVGLGGGTDPQ 242

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + GVA++GR PT   NGP LLE F+FDF+ ++YGQ   V+F +YLR E+KF  I  L  
Sbjct: 243 RFDGVASYGRRPTF-DNGPPLLEVFLFDFNADLYGQTLDVAFIEYLRDELKFDSIPALIR 301

Query: 297 YMGEDEKKARKILESS 312
            M +D  +AR +LE++
Sbjct: 302 QMDDDSLRARAVLEAA 317


>gi|99081911|ref|YP_614065.1| FMN adenylyltransferase / riboflavin kinase [Ruegeria sp. TM1040]
 gi|99038191|gb|ABF64803.1| FMN adenylyltransferase / riboflavin kinase [Ruegeria sp. TM1040]
          Length = 310

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  + +    +    +G  VAIGNFDG+H GH  +++ A K A ++P+ V++F PHPR
Sbjct: 1   MRIIRDYQF---VEEQDRGATVAIGNFDGVHRGHRSVIDLARKAAPDAPLGVMTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++P F L     +   LEK+G   L +  F    ++ + E+F + V+ E L +  
Sbjct: 58  EFFAPNAPPFRLMSAEARAHRLEKIGVEKLYQLNFNHALSSLTPEEFARNVIAEGLGLSH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK RAG    LQ+ G+  GF    I  L       VSS+ IRTAL++G   
Sbjct: 118 VVVGADFCFGKGRAGTVEDLQRFGQDMGFGVT-IAPLMGYSEHTVSSTAIRTALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +VI GE+ GRTLGFPTAN  +        GVYA+     D   + S
Sbjct: 177 DAAAMLGHWHRIEGEVIGGEQRGRTLGFPTANQSIDGLHPPAFGVYAVLVDVLDGPHKGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+++FDF   +YG   +V   DYLR E+KF  +E     
Sbjct: 237 YHGAASVGVRPMFDGEQP-NIETYLFDFKGNLYGAHLSVGLVDYLRAELKFDGLEPFIAQ 295

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL S
Sbjct: 296 MQADCDQARAILTS 309


>gi|300310737|ref|YP_003774829.1| riboflavin biosynthesis protein [Herbaspirillum seropedicae SmR1]
 gi|300073522|gb|ADJ62921.1| riboflavin biosynthesis protein [Herbaspirillum seropedicae SmR1]
          Length = 325

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 14/330 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M VF  +              + IGNFDG+HLGH  +L +  + A    +   V++F PH
Sbjct: 1   MKVFRGL----PTAESRAPCALTIGNFDGVHLGHQALLARVREAAGKLGLDAAVMTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR                ++    + + L   G   ++   F    A  S + FI+K+LV
Sbjct: 57  PREFFAQLAGTPERAPARIANLRDKLEALANSGIDRVVVEHFGSHFAALSPQDFIEKILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L V+ ++ G  F FG  RAG    L   G++YGF    +  +  N    +SSS +R A
Sbjct: 117 QGLHVRWLMVGDDFCFGARRAGTLDTLIAAGQQYGFEVHALPTV-TNAGVRISSSAVRAA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +     +  LLG+ + I   V+HG+K+GRT+GFPT NM++        G++ ++    
Sbjct: 176 LAEADFGLSRQLLGHPYAISGRVVHGKKLGRTIGFPTLNMRVGHKRPALSGIFVVQVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +     VA+ G  PT+  +G +LLE+ + DF  + YG+   V F   LR E K+ D+  
Sbjct: 236 AEQPLPAVASLGVRPTVDDSGRVLLETHLLDFKGDCYGKLVRVEFLKKLRDEEKYVDLPT 295

Query: 294 LKIYMGEDEKKARKILESS--YPLSERDRI 321
           L   +  D   AR     +  + +S  DRI
Sbjct: 296 LTAAIARDVDHARAWFRENAGFAVSATDRI 325


>gi|213971064|ref|ZP_03399184.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato T1]
 gi|301384213|ref|ZP_07232631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato Max13]
 gi|302060863|ref|ZP_07252404.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato K40]
 gi|302132872|ref|ZP_07258862.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213924172|gb|EEB57747.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato T1]
 gi|330878963|gb|EGH13112.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966382|gb|EGH66642.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 308

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 149/309 (48%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA  F++ VL++ L V
Sbjct: 58  PREFFAPQTAPARLARLRDKLELLSAEGVDRVLCLSFNQRLSKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GLRVSSTKVRKALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D   +
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-DGKPW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|221135352|ref|ZP_03561655.1| riboflavin biosynthesis protein RibF [Glaciecola sp. HTCC2999]
          Length = 315

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 113/320 (35%), Positives = 161/320 (50%), Gaps = 8/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    ++    K  V+ IG FDG+HLGH  +L   I  A     P TV+ F P 
Sbjct: 1   MELIRGL---HNIRAQHKSCVLTIGKFDGVHLGHKAVLSSLIAKAKSLGLPSTVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +    LS    + + L+ +G   LI   FT + A+ S E FI+  LV  L V
Sbjct: 58  PEEVFSPDNAPARLSRWRDKYEALKDIGIDRLICVHFTAKFASQSPEHFIEHTLVNALGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG+ R GD  +L+  G ++GF  V     R++  + +SS+ IR AL    
Sbjct: 118 KFLVVGDDFRFGQARRGDFTMLKAAGHEHGFSVVNTASFRHDDCR-ISSTAIREALANNQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  FTI   V+HG+  GRT+GFPTAN+ L        GV+A++   Q     
Sbjct: 177 FTLANEMLGREFTINGRVVHGQAKGRTIGFPTANVNLQRAKAPIVGVFAVQAECQGL-RL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE  +FDF Q+IYGQ  +VS    LR   KF    +L+  +
Sbjct: 236 DGVANIGTRPTV-DGHQGLLEVHLFDFDQDIYGQYLSVSLQHKLRGIKKFDTFAQLQTQI 294

Query: 299 GEDEKKARKILESSYPLSER 318
            ED ++AR +L  S     +
Sbjct: 295 AEDAQQARNLLAESSSAQTK 314


>gi|104783647|ref|YP_610145.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           entomophila L48]
 gi|95112634|emb|CAK17362.1| riboflavin biosynthesis protein RibF [Pseudomonas entomophila L48]
          Length = 316

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA +F++++LV+ L V
Sbjct: 58  PREYFAPDTAPARLARLRDKVELLAGEGIDRVLCLAFNQRLSKLSACEFVEQILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD G L + G+++GF     + +       VSS+ +R AL  G 
Sbjct: 118 RHLEVGDDFRFGCDRAGDFGFLIESGKQHGFTVEAANTV-IQDGLRVSSTEVRKALADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AAHLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 177 FELAAHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E LK
Sbjct: 236 PGVGNIGVRPTVSGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|228472337|ref|ZP_04057103.1| riboflavin biosynthesis protein RibF [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276540|gb|EEK15264.1| riboflavin biosynthesis protein RibF [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 310

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 116/317 (36%), Positives = 184/317 (58%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  +I   QS P H    V+ IG FDGIH+GH  I+ Q ++ A    +  TVL+F PH
Sbjct: 1   MQLVTDITHFQS-PEH---TVLTIGTFDGIHIGHQRIITQVVERAKEQDLLPTVLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++  S+PI  +     + ++L   G + L+   F+ E A  SA+ +++++LV  L  
Sbjct: 57  PRMVLDPSAPIALIQTIEERAQLLASYGIAQLVIQPFSKEFAALSAQDYVRELLVGKLRA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFGK+R+     L+  GE+Y F    I  ++   S  VSS+ IR AL KG 
Sbjct: 117 KEIIIGYDHRFGKNRSAGIEELKAFGEQYHFQVEEI-PVQEVDSLSVSSTKIRQALEKGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  A H LGY F++   V+HG+K+GRTLG+PTAN+Q+  S  ++ K GVYA+    + + 
Sbjct: 176 VQTANHYLGYSFSLAGTVVHGQKLGRTLGYPTANLQIENSHKLIPKIGVYAVYMLWEGKK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + G+ + G+NPT+   G   +E + FDFS ++YG+   + F D++R E+KF  +E LK 
Sbjct: 236 VF-GMLSIGKNPTIEGKGE-SIEVYFFDFSSDLYGKEIRLYFIDFIRDEVKFPSLEALKA 293

Query: 297 YMGEDEKKARKILESSY 313
            + +DE   + ++ ++ 
Sbjct: 294 QLKKDEDSCKWLIANAQ 310


>gi|257465709|ref|ZP_05630080.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
 gi|257451369|gb|EEV25412.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
          Length = 321

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 114/323 (35%), Positives = 169/323 (52%), Gaps = 11/323 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        +     +G  ++IGNFDG+HLGH  IL +  + A   N P  V+ F P 
Sbjct: 1   MQLIRGFHSLANHSVFQQGCALSIGNFDGVHLGHQNILARLNEKAKTLNLPSVVMVFEPQ 60

Query: 59  PRTIIQSSS------PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           PR      S      P   L     + K LEK G   ++  +F+ + A  +A +FI+K+L
Sbjct: 61  PREFFAKKSGNSTANPPARLMRLRDKLKYLEKAGVDFVLCVRFSAQFAKLTANEFIEKLL 120

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           VE L V+ +  G  F FG DR+G+   L   G+  GF         +   + +SSS IR 
Sbjct: 121 VERLNVRYLSVGDDFHFGSDRSGNYQTLLNAGKTLGFEVEE-SHTHSFGRERISSSLIRD 179

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+K  +  AA LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++  T
Sbjct: 180 ALSKDELTLAAKLLGKPYSIGGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVYAVKIET 239

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           +    YSG+AN G  PT+    P LLE  I +F++ IYG+   VSF   +R E+KF   E
Sbjct: 240 K-CGIYSGIANVGNRPTINGTKP-LLEVHILNFNRSIYGEAVEVSFLKKIRNEVKFPSFE 297

Query: 293 KLKIYMGEDEKKARKILESSYPL 315
            L+  + +D ++A +  +    L
Sbjct: 298 ALREQIEKDRQQAVEFFKEFTSL 320


>gi|271963661|ref|YP_003337857.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptosporangium roseum DSM 43021]
 gi|270506836|gb|ACZ85114.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptosporangium roseum DSM 43021]
          Length = 317

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 19/321 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +H ++    +P      V+ IG FDG+H GH  ++ +A+ +A+   +   V++F+PH
Sbjct: 1   MRGWHGLD---DVPEDWGRSVITIGVFDGVHRGHQQMVARAVAMADELGLLSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+    + ++L  +G  A+    FTLE +  S ++F+Q VLV+ L  
Sbjct: 58  PEEVVRPGTHPPRLTTARHRTELLAALGVDAVCVLPFTLEFSRMSPDEFVQTVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   +GD   LQ  GEKY F    +  + N   + +SS+ IR  L  G 
Sbjct: 118 GGVVVGENFRFGHKASGDVETLQTLGEKYDFVAEAVPLVSN--GETISSTLIRERLAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIR-------- 229
           +   A  LG    +E  V+ G + GR LGFPTAN++      +  +GVYA          
Sbjct: 176 MEAVAAALGRPHRVEGVVVRGYQRGRQLGFPTANVESPDFTAIPADGVYAGWLQGIPTGN 235

Query: 230 -FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIK 287
                    +    + G NPT     P  +E++  D    ++YG    V F   LR  +K
Sbjct: 236 LPAVYGGERWPAAISVGTNPTFEGV-PRTVEAYALDRDDLDLYGAHMAVDFGPRLRGNVK 294

Query: 288 FKDIEKLKIYMGEDEKKARKI 308
           F  IE L   +  D  +AR++
Sbjct: 295 FDSIEALVDQIRADVDEARRL 315


>gi|54025860|ref|YP_120102.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nocardia
           farcinica IFM 10152]
 gi|54017368|dbj|BAD58738.1| putative riboflavin kinase [Nocardia farcinica IFM 10152]
          Length = 319

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 91/324 (28%), Positives = 155/324 (47%), Gaps = 18/324 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  + +++    +P      V+ IG FDG+H GH  ++ +A+K   A   P  +++F+PH
Sbjct: 1   MQRWRSLD---DVPADWGRCVLTIGVFDGVHRGHAQLISRAVKSAAARGVPAVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+  + + +++E++G        FT +    +  +++  +LVE L V
Sbjct: 58  PMEVVRPGSHPAQLTTLTRRAELVEELGIDVFCVMPFTQDFMKLTPARYVHDLLVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK  AG    +++ G+++GF    + +L    +   SS+ IR  +  G 
Sbjct: 118 AEVVVGDNFTFGKKAAGTVDTMRELGQRFGFEVDGV-KLVGEHAVTFSSTYIRACVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-- 235
           +  AA  LG    +E  V+HG+  GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 MRAAAEALGRPHRVEGVVVHGDGRGRELGFPTANVAPPMYAAIPADGVYAGWFTVLGPGP 236

Query: 236 --------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                          + G NPT        +E+++ D   ++YGQ   V F ++LR   K
Sbjct: 237 TIGTVTPGERAMAAISVGTNPTF-SGRARTVEAYVIDGQADLYGQHVAVDFVEHLRGMEK 295

Query: 288 FKDIEKLKIYMGEDEKKARKILES 311
           F  ++ L   M  D   AR+IL +
Sbjct: 296 FDGLDSLIAAMRRDVDNARRILTA 319


>gi|270159964|ref|ZP_06188620.1| riboflavin biosynthesis protein RibF [Legionella longbeachae
           D-4968]
 gi|289165292|ref|YP_003455430.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella longbeachae NSW150]
 gi|269988303|gb|EEZ94558.1| riboflavin biosynthesis protein RibF [Legionella longbeachae
           D-4968]
 gi|288858465|emb|CBJ12343.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella longbeachae NSW150]
          Length = 322

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 159/313 (50%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   ++   +     KG V  IGNFDG+HLGH  ++      AN    P+ ++ F P 
Sbjct: 1   MKLLRGVQHFSAFN---KGVVATIGNFDGVHLGHQSLIRTLRAKANHLKLPLVLILFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q       LS    + + L       +  +KF  + A  SAE F +  L   L V
Sbjct: 58  PREFFQKEKAPARLSSLREKLEALRCCQVDYIYCFKFNNDLAQTSAEDFARDYLFSMLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGK+R GD  +L++  ++Y            N+ + +SS+ IR+AL KG 
Sbjct: 118 KHLLVGEDFRFGKNREGDISLLKELSQEYACDVSIYSNFCINEDR-ISSTRIRSALQKGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG  + I   ++HG+  GR  G PTAN+ L+   L  +GV+ ++ R   +T Y
Sbjct: 177 LNTAAKYLGRIYNICGRILHGDGRGRQWGIPTANLALNRYSLPLQGVFVVQVRIASKTVY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN GR PT+  +  + LE  +FDF Q IYG+   V F   LR E+KF  ++ L   +
Sbjct: 237 -GVANVGRRPTVDGSKNI-LEVHLFDFDQSIYGELMQVFFLHKLRDEVKFNSVDALLAQI 294

Query: 299 GEDEKKARKILES 311
            ED K A+  L +
Sbjct: 295 NEDIKAAKAYLRT 307


>gi|77359864|ref|YP_339439.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874775|emb|CAI85996.1| bifunctional protein [Includes: Riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Pseudoalteromonas haloplanktis TAC125]
          Length = 308

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 108/311 (34%), Positives = 158/311 (50%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   I    ++ +   G V+ IGNFDG+HLGH  +L+  +    ANN P TV+ F P 
Sbjct: 1   MELIRGI---HNIRSQHFGCVLTIGNFDGVHLGHAEVLKGLLIDAKANNLPSTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     S+    L+    +  +L ++G   +I   F  + AN  AEQF+  +L++ L V
Sbjct: 58  PQEFFAKSNAPARLTRLRDKLLLLSELGIERVICISFNQQFANMHAEQFVSDILIKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK R G+  +L   G++           R   ++ VSS+ IR AL  G 
Sbjct: 118 KALTVGDDFRFGKQRQGNFDLLVSMGKQASMDVKSTASFRQLNAR-VSSTLIREALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  Y
Sbjct: 177 LSTAKVMLGHNYAISGRVIHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQVY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT       LLE  +FDF+Q+IYGQ   V     LR E KF+ + +L   +
Sbjct: 237 -GVANIGNKPTFN-GTRALLEVHLFDFAQDIYGQFMHVELIKKLRDEKKFETLTQLTAQI 294

Query: 299 GEDEKKARKIL 309
             D   A++  
Sbjct: 295 ATDVAAAKQCF 305


>gi|33596601|ref|NP_884244.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           parapertussis 12822]
 gi|33601156|ref|NP_888716.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           bronchiseptica RB50]
 gi|33573302|emb|CAE37285.1| riboflavin biosynthesis protein [Bordetella parapertussis]
 gi|33575591|emb|CAE32669.1| riboflavin biosynthesis protein [Bordetella bronchiseptica RB50]
          Length = 321

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 155/317 (48%), Gaps = 7/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M     I      P+      + IGNFDG+HLGH  IL +  + A    +   V++F PH
Sbjct: 1   MKPSLRIYRYPPPPSQRTPCALTIGNFDGVHLGHQAILARVRQEARARGLVPAVMTFEPH 60

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +S    + + L   G   +   +F    A  SA  FI+ +LV
Sbjct: 61  PREYFATLNRRPELAPTRISGLRDKLQALAAAGIEQVAVERFDARLAEMSANAFIEDLLV 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L+ + ++ G  FR+G  R+GD  +L++ G  +GF    + ++ + +   +SSS +RTA
Sbjct: 121 AGLQTRWLLVGEDFRYGHKRSGDIDLLREAGLAHGFEVCTLADITDRQGHRISSSEVRTA 180

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  AA LLG  F I   VIHG K+GR LGFPT N++++P    + G+Y +R    
Sbjct: 181 LAVGDLDRAAQLLGQPFHISGHVIHGRKLGRELGFPTMNLRVAPRCATRSGIYVVRVLGL 240

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                  VA+ G  PT+   G +LLE+ + D S + YG+   V F   LR E KF D+  
Sbjct: 241 QDRPLPAVASLGVRPTVEDRGRVLLEAHLLDESLDAYGKLVRVEFLHKLRDEEKFADLPS 300

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D + AR    
Sbjct: 301 LTAAIAQDAQNARAYFA 317


>gi|207723590|ref|YP_002253989.1| riboflavin biosynthesis protein [Ralstonia solanacearum MolK2]
 gi|206588792|emb|CAQ35755.1| riboflavin biosynthesis protein [Ralstonia solanacearum MolK2]
          Length = 354

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 5/313 (1%)

Query: 6   NIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           ++++ + LPN        + IGNFDG+H GH  +L +A   A+    P+TV++F PHPR 
Sbjct: 22  HVKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPRE 81

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     ++    + + L + G   ++   F    A  +  +F++ VLV+ L  + +
Sbjct: 82  FFMPDRAPTRIALLRDKLESLRRQGVDHVVVEHFNAHFAAQTPTEFVRNVLVDGLHTRWL 141

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  RAGD   LQ  G ++ F    +  + +     +SSS +R AL  G + +
Sbjct: 142 LVGDDFRFGAKRAGDFTYLQAAGAQFDFEVEQMGSV-SESGIRISSSAVREALAAGDLEH 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     V
Sbjct: 201 ARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  PT+  +G +LLE  IFD+    YG+   V F   LR E +F  ++ LK  +  D
Sbjct: 261 ASIGVRPTVDDSGRVLLEVHIFDYHANAYGKLVRVEFMKKLRDEARFDSLDALKDAIARD 320

Query: 302 EKKARKILESSYP 314
              AR     + P
Sbjct: 321 CVDARHFFGLALP 333


>gi|253995904|ref|YP_003047968.1| riboflavin biosynthesis protein RibF [Methylotenera mobilis JLW8]
 gi|253982583|gb|ACT47441.1| riboflavin biosynthesis protein RibF [Methylotenera mobilis JLW8]
          Length = 304

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 17/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +F +I  +   P       +AIGNFDG+HLGH  +L Q  + A   N    V++F PH
Sbjct: 1   MQIFRHIPTSLQQP-----CALAIGNFDGMHLGHQALLAQLKQTAQAVNLEAAVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L     + +   + G   +   +F    A  +AE F+ ++L   +  
Sbjct: 56  PREFFTPESAPARLCSMREKLEYFAQAGVERVYVCRFNQRFAKVTAEAFMHELLRNAVNA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG  RAG            GF  V + ++ +  S+ VSS+ +R+AL +G 
Sbjct: 116 QAVLVGEDFRFGAKRAGSVNDFVAA----GFKLVSLPQV-DLGSERVSSTRVRSALDEGR 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG  ++I   V+HG K GR LGFPTAN+ +  +    +GVYA++    +    
Sbjct: 171 LQEAALLLGRGYSISGKVVHGAKRGRQLGFPTANVHMRHERPALKGVYAVKLDGLN---- 226

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VAN G  PT+     L LE  + DF+  +Y +   V F   +R E+KF  ++ LK  +
Sbjct: 227 -AVANLGVRPTIAGVPKLSLEVHVLDFNGNLYDKHVHVEFLQKIRNEMKFDGLDALKAQI 285

Query: 299 GEDEKKARKILESSYP 314
             D + ARK   +  P
Sbjct: 286 AIDVELARKFFGALTP 301


>gi|111023612|ref|YP_706584.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodococcus
           jostii RHA1]
 gi|226366101|ref|YP_002783884.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodococcus
           opacus B4]
 gi|110823142|gb|ABG98426.1| riboflavin kinase/ FAD synthetase [Rhodococcus jostii RHA1]
 gi|226244591|dbj|BAH54939.1| flavokinase/FAD synthetase [Rhodococcus opacus B4]
          Length = 336

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 15/323 (4%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTII 63
                  +P      V+ IG FDG+H GH  ++ +A+        P  +++F+PHP  ++
Sbjct: 15  RWRGLDEVPADWGRCVLTIGVFDGVHRGHAQLISRAVAAARTRGIPSVLMTFDPHPMEVV 74

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +  S    L+  + + ++ E++G        FT E    + E++  ++LVE L V  V+ 
Sbjct: 75  RPGSHPAQLTTLARRAELAEELGIDVFCVMPFTAEFMKLTPERYAHEILVERLHVADVVV 134

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FGK  AG+  +L++ G+++GF    +  L    +   SS+ IR+ +  G +  A 
Sbjct: 135 GENFTFGKKAAGNVDLLRQIGDRFGFAVDGV-TLLAEHAVTFSSTYIRSCVDAGDMAAAT 193

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ------- 235
             LG    +E  V+HG+  GR LG+PTAN+       +  +GVYA  F            
Sbjct: 194 EALGRPHRVEGVVVHGDGRGRQLGYPTANVAPPMYAAIPADGVYAAWFTVLGHGVDLGTV 253

Query: 236 ---TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
                Y    + G NPT        +E+F+ D   ++YGQ   V   + LR   KF  ++
Sbjct: 254 TSGERYMAAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDLVERLRGMEKFDSVD 312

Query: 293 KLKIYMGEDEKKARKILESSYPL 315
            L + MG+D ++AR IL +S  +
Sbjct: 313 DLIVAMGKDAERARAILAASEDV 335


>gi|310815421|ref|YP_003963385.1| riboflavin biosynthesis protein RibF [Ketogulonicigenium vulgare
           Y25]
 gi|308754156|gb|ADO42085.1| riboflavin biosynthesis protein RibF [Ketogulonicigenium vulgare
           Y25]
          Length = 312

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 121/316 (38%), Positives = 171/316 (54%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +   +Q +    +  V+AIGNFDG+H GH  +++ A +IA   N+P+ VL+F PH
Sbjct: 1   MDIIRD---SQFIAPAQRCAVIAIGNFDGVHAGHAAVIDHARQIAQQMNAPLGVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR       P F L   + + + L + G   L    F    A  SAE FIQK+L E L V
Sbjct: 58  PRQFFIPDGPTFRLMDAATRAEQLRESGVQRLYELPFNSALAELSAEDFIQKILHERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FGK R+G+  +L + GE  GF    +  L     + VSS+ IRTAL +G 
Sbjct: 118 KHVVVGQDFHFGKGRSGNAAMLAEMGEHLGFGVT-VAPLIALTGKEVSSTAIRTALAEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   IE  V HG++ GR LGFPTAN+ ++   + + GVYA     +D    
Sbjct: 177 PRDAAAMLGHVHRIEGIVEHGDQRGRELGFPTANIGINGLHMPRFGVYATTVIVRDGPYA 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G  + G  PT   N P   E+++ DF  ++YG R +V   DYLRPE+KF  I+ L 
Sbjct: 237 GQYLGATSIGSRPTFGVNKP-NCETYLLDFRGDLYGARISVGLVDYLRPELKFDSIDALI 295

Query: 296 IYMGEDEKKARKILES 311
             M  D  +AR+IL  
Sbjct: 296 TQMHADVIEARRILAD 311


>gi|288940911|ref|YP_003443151.1| riboflavin biosynthesis protein RibF [Allochromatium vinosum DSM
           180]
 gi|288896283|gb|ADC62119.1| riboflavin biosynthesis protein RibF [Allochromatium vinosum DSM
           180]
          Length = 313

 Score =  332 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+HLGH  + ++ +        P TV++F P 
Sbjct: 1   MRLIRGL---HNLRPADRGCVATIGNFDGVHLGHRAVFQRLLARGCELGLPATVITFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    S    L+    +   L       ++  +F    A   A +F+Q++L+E L V
Sbjct: 58  PMEVFAPESAPARLTRLREKLGALRASDIERVMLLEFGPRLAAMPAPEFVQRLLIEGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKY-----GFHTVFIDELRNNKSQIVSSSNIRTA 173
           + ++ G  FRFG+ R GD  +L+  G        GF    +  +  + ++ +SS+ +R A
Sbjct: 118 RFLLVGDDFRFGRGRTGDFALLRDMGRVAEANGAGFAVEDLHTI-THGAERISSTRVREA 176

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +G +  A HLLG  + +E  V+HG+K GR +GFPTAN+ L   +    GVYA+R +  
Sbjct: 177 LARGDLEQARHLLGRPYCLEGRVVHGDKRGRAIGFPTANIALHRRVSPVRGVYAVRVKGL 236

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               + GVAN G  PT+   G   LE  +FDF Q IYG+   V     LR E +F+  E 
Sbjct: 237 GSEPWPGVANIGTRPTVDGTGAR-LEVHLFDFDQSIYGRHLEVELVLRLRDEQRFESFEA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L+  +  D   AR  L +
Sbjct: 296 LRGQIQRDAGTARAFLGA 313


>gi|152998226|ref|YP_001343061.1| riboflavin biosynthesis protein RibF [Marinomonas sp. MWYL1]
 gi|150839150|gb|ABR73126.1| riboflavin biosynthesis protein RibF [Marinomonas sp. MWYL1]
          Length = 309

 Score =  332 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++ +  K  V+ IGNFDG+HLGH  IL +   +A   NSP  ++ F P 
Sbjct: 1   MELIRGI---HNIRSKHKECVLTIGNFDGVHLGHGAILARVKALAKQYNSPAAIMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    +     + K+LE  G   ++   F  +     A+ F Q++L++ L V
Sbjct: 58  PREFFAPDTAPGRIGRLRDKVKLLEGQGIDYVLCMPFNPKLQQLDAQAFCQQILLDGLSV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG DR GD   LQ+ G ++GF       + N  ++ VSS+ +R AL +G 
Sbjct: 118 KHLVVGDDFRFGCDRQGDFYYLQEFGGQHGFDVENTPSVLNALNERVSSTLVRDALERGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   +G+  ++   V+HG+++GR LGFPTAN+ L        GVYA+ F   D  S+
Sbjct: 178 IAAAQMNMGHSVSLSGRVVHGQQLGRKLGFPTANVHLKGIKSALSGVYAVTFMV-DSVSH 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+    P+ LE  + DFS ++Y +   V+F  ++R E K   ++ L+  +
Sbjct: 237 NGVANIGVRPTVQGKTPI-LEVHLLDFSGDLYDKYVQVTFCHFIRAERKMASLDALEKQI 295

Query: 299 GEDEKKARKILESS 312
             D+++A +   + 
Sbjct: 296 QCDKEEALRFFANQ 309


>gi|116750603|ref|YP_847290.1| riboflavin biosynthesis protein RibF [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699667|gb|ABK18855.1| riboflavin kinase / FMN adenylyltransferase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  332 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +F  +E   ++   L    + IGNFDG+H GH  + ++  + A        V++F+PH
Sbjct: 1   MEIFRGLE---NIRQSLNNPAITIGNFDGVHRGHQALFDRVKEWAKRLGGKSVVMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  +  +  ++    + +++   G  A I   F+ E +  SA  F++ +LV  + +
Sbjct: 58  PVEVLFPNKNLQFITSQERKLELISASGIDAAIVVPFSREFSRISARGFVEDLLVGRIGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  +RFG  R GD  +L++ G ++GF    +  +R + +  VSS+ IR  + KG 
Sbjct: 118 KALVVGHDYRFGYSREGDIVLLKELGREFGFEVETLSGVRLDDTV-VSSTVIRQLILKGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  + I+  V  G + G   LGFPTAN+++S     + GVY +       T 
Sbjct: 177 MKRANRLLGRCYEIDGIVEVGRQRGGRLLGFPTANIRMSSQAPPRTGVYIVEVEVNG-TR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G AN G NPT   +  L LE  IFDFS+ IYG+   V F D +R E +F   ++L   
Sbjct: 236 YRGAANLGYNPTF-GDTDLSLEVHIFDFSRNIYGESIKVWFLDRIRDERRFAGPQELADQ 294

Query: 298 MGEDEKKARKILES 311
           +  D  +AR+    
Sbjct: 295 IKLDVARAREFFAD 308


>gi|255263613|ref|ZP_05342955.1| riboflavin biosynthesis protein RibF [Thalassiobium sp. R2A62]
 gi|255105948|gb|EET48622.1| riboflavin biosynthesis protein RibF [Thalassiobium sp. R2A62]
          Length = 314

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 117/318 (36%), Positives = 163/318 (51%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  +      LP   +G  VAIGNFDG+HLGH  +L+Q    A   P+ V++F PHPR
Sbjct: 1   MRIIRD---TSFLPPDDRGAAVAIGNFDGVHLGHQAVLKQTSSAAAGVPLGVMTFEPHPR 57

Query: 61  TIIQSSS----PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                        F L     + + L K+G   L    FT   A  S   F +++LV+ +
Sbjct: 58  EFFARQHGKTLDPFRLMNADAKARRLSKLGVDRLYEISFTTALAELSDRDFARQILVDGM 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V  V+ G  FRFGK R GD   L   G + GF     D +     + VSS+NIR ALT+
Sbjct: 118 GVSHVVVGADFRFGKGRTGDAKTLAAYGAEMGFGVTISDMISTPVGE-VSSTNIRAALTE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-- 234
           G   +AA +LG+   IE +VI G++ GR LG+PTAN+ +        GVYAI+    D  
Sbjct: 177 GRPQDAAAMLGHWHRIEGEVIRGDQRGRELGYPTANVSIDGLHQPMFGVYAIKVDVLDGA 236

Query: 235 -QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              +Y G A+ G  P    N P   E+F+FDF  ++YG R +V+  ++LR E  F  ++ 
Sbjct: 237 HVGTYDGAASIGVRPMFGVNTP-NCENFLFDFQGDLYGSRISVALVEFLRGEENFDSLDA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   MG D  KAR+IL  
Sbjct: 296 LITQMGADCIKAREILSD 313


>gi|332532156|ref|ZP_08408039.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038497|gb|EGI74941.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 316

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 167/321 (52%), Gaps = 9/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L+  +    A++ P TV+ F P 
Sbjct: 1   MELIRGI---HNIRPHHFGCVLTIGNFDGVHLGHAEVLKGLLSDAKAHSLPSTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     ++    L+    + ++L  +G   +I   F  + AN  AEQF+  +L++ L V
Sbjct: 58  PQEFFAKNNAPARLTRLRDKLRLLSDLGIERVICISFNQQFANMHAEQFVNDILIKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FGK R G+  +L   G++ G         R   ++ VSS+ IR AL  G 
Sbjct: 118 KALTVGDDFKFGKQRQGNFDLLASMGKQAGMDVKSTASFRQLNAR-VSSTLIRDALASGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  +
Sbjct: 177 LASAKIMLGHDYAISGRVIHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT       LLE  +FDF+Q+IYGQ   V   + LR E KF+ + +L   +
Sbjct: 237 -GVANVGNKPTFN-GTRALLEVHLFDFAQDIYGQFMHVELIEKLRDEKKFETLTQLTAQI 294

Query: 299 GEDEKKARKILESSYPLSERD 319
             D   A++    +  +++RD
Sbjct: 295 ATDVAAAKQCFGLNQ-VADRD 314


>gi|302879259|ref|YP_003847823.1| riboflavin biosynthesis protein RibF [Gallionella capsiferriformans
           ES-2]
 gi|302582048|gb|ADL56059.1| riboflavin biosynthesis protein RibF [Gallionella capsiferriformans
           ES-2]
          Length = 323

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +   +          +   + IGNFDG+H GH  +L Q    A     P  V+ F PH
Sbjct: 16  MQILRGLYS-----PDTRPVALTIGNFDGVHRGHQALLNQLKAAAAARGLPTAVVIFEPH 70

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    LS    +  + E+ G   +   +F    A  SA  FI+ +  + L  
Sbjct: 71  PREFFTPDTAPARLSSLREKLALFEQFGIDRVQVCRFDARLAQMSAADFIRAL-HQKLNA 129

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  FRFG  R GD  +++K GE+ GF    +  +  +    +SS+ +R AL  G 
Sbjct: 130 KFVLIGDDFRFGSGRIGDFALMEKIGEQQGFEVQAVQSV-THDGVRISSTAVRAALAAGQ 188

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +      LG  ++I   V+HG+ +GR LG+PTAN+Q+  +     G++ +    +     
Sbjct: 189 MRRCHDYLGRTYSISGRVVHGDGVGRKLGYPTANIQIKHNRPPLSGIFVVEAHAEGLGIL 248

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+      +LE  +F+F Q+IYG+R  V F    R E KF D+  L   +
Sbjct: 249 QGVASLGVRPTLKHQARPILEVHLFEFKQDIYGKRLRVEFLQKRRDEQKFPDVGALTRQI 308

Query: 299 GEDEKKARKILES 311
             D + A+K  E 
Sbjct: 309 ALDVENAKKWFEQ 321


>gi|169630191|ref|YP_001703840.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium abscessus ATCC 19977]
 gi|169242158|emb|CAM63186.1| Probable bifunctional FAD synthetase/riboflavin biosynthesis
           protein RibF [Mycobacterium abscessus]
          Length = 320

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 18/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +        +P+     V+ IG FDG+H GH  ++ +A+K A   N    +++F+PH
Sbjct: 1   MQRWRG---QDEIPSDWGRCVLTIGVFDGVHRGHAELIGRAVKAARELNLKSVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    L+  + + ++ E++G    +   FT E    S E+++ ++LVE L V
Sbjct: 58  PMEVVFPGTHPAQLTTLTRRAELAEELGVDVFLVVPFTPEFMKLSPERYVHELLVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK  AG+  +L+K GE++GF    +  L    +   SS+ IR+ +  G 
Sbjct: 118 AEVVVGENFTFGKKAAGNVQMLKKAGERFGFKVDAV-TLVTEHAVTFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-- 235
           ++ A   LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 MVAATEALGRPHRVEGVVVRGDGRGRELGFPTANVAPPMFSAIPADGVYAAWFTLLGHGP 236

Query: 236 --------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT        +E+FI D + ++YGQ   V F   +R   K
Sbjct: 237 TMGTVVPGERYQAAVSVGSNPTF-SGKARTVEAFILDTTADLYGQHVAVDFVARIRSMEK 295

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           FK I+ L + MG+D +KAR IL  +
Sbjct: 296 FKSIDDLVVAMGKDAEKARTILARN 320


>gi|170740462|ref|YP_001769117.1| riboflavin biosynthesis protein RibF [Methylobacterium sp. 4-46]
 gi|168194736|gb|ACA16683.1| riboflavin biosynthesis protein RibF [Methylobacterium sp. 4-46]
          Length = 321

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 118/306 (38%), Positives = 162/306 (52%), Gaps = 5/306 (1%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQS 65
              + +P  L+G V AIGNFDG+H GH  ++    +       P  VL+F PHPR     
Sbjct: 5   RDGEPVPAALRGAVAAIGNFDGLHRGHLALVAAVREMAADRGGPSAVLTFEPHPRDFFAP 64

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
             P+F L+    +  IL ++G   +   +F    A  SA  F+  +L   L +  V+ G 
Sbjct: 65  DRPVFRLTGEGAKLAILARLGLDGVFLRRFDSALAGTSAAGFVTGLLKRDLGLAGVVIGH 124

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAH 184
            F FG+ R G  G+L+    + G     ID +     +  VSSS IR AL  G +  A H
Sbjct: 125 DFHFGRGREGTPGLLRALCAENGLACRVIDPVAAGGGEAPVSSSAIRAALAAGDIALANH 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+R+ +E +V HG+K GR LGFPTAN+ L P   L  G+YA+R R  D T   G A++
Sbjct: 185 LLGFRWFVEGEVRHGDKRGRVLGFPTANLAL-PACGLAHGIYAVRARLPDGTMRDGAASY 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT   NG  LLE+ +FDFS ++YG+R  V F  YLR E +F   E L   M  D  +
Sbjct: 244 GRRPTF-DNGAPLLETTLFDFSGDLYGRRLAVEFVAYLRGEARFDSAEALVAQMHRDAAE 302

Query: 305 ARKILE 310
           AR +L 
Sbjct: 303 ARLVLA 308


>gi|152986458|ref|YP_001350533.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PA7]
 gi|150961616|gb|ABR83641.1| riboflavin biosynthesis protein RibF [Pseudomonas aeruginosa PA7]
          Length = 312

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G V  IGNFDG+HLGH  IL +  + +     P  V+ F P 
Sbjct: 1   MQLLRGL---HNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSQELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L+    + ++L   G   ++   F       SA +F+++VLV+ L V
Sbjct: 58  PREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR+GD   L     + GF       +       VSS+ +R AL  G 
Sbjct: 118 RHLEVGDDFRFGCDRSGDFAFLVNASREQGFTVEAAATV-ELDGVRVSSTRVRQALADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++   V+HG+K+GR LG PTAN+QL        GVY +     D    
Sbjct: 177 LHLAERLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLV-STLVDGQRC 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE  + DFS ++YG+   V+F   LR E +F  +E LK
Sbjct: 236 QGVANIGTRPSVNGDGRPHLEVHLLDFSGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|37524594|ref|NP_927938.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784018|emb|CAE12885.1| riboflavin kinase/FMN adenylyltransferase [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 314

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +G V+ IGNFDG+H GH  +L+           P+ V+ F P 
Sbjct: 1   MELIRGIR---NIRTCHRGCVLTIGNFDGVHRGHQALLKHLKHEGQRLGLPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L + G   L+  KF    A  + E F+ ++LVE L V
Sbjct: 58  PLEFFAKGHAPARLTRLRDKAKYLAQCGVDYLLCVKFDRNFAANTPEAFVSRLLVEKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG+ R+GD   LQ+ GE YGF     +   ++    +SS+ IR AL    
Sbjct: 118 KFLAVGDDFRFGQSRSGDFAFLQRAGESYGFDVTSSESFCDD-GLRISSTAIRQALQNDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG+ ++I   V+HG+++G T+GFPTAN+ L   ++   GVY +          
Sbjct: 177 LVLAETLLGHPYSICGRVVHGKRLGSTIGFPTANLPLKRLVVPVHGVYVVEVYGLGDQPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+   G   LE  + D   ++YG+   V     LR E +F  ++ LK  +
Sbjct: 237 PGVANIGTRPTVSGQGQ-QLEVHLIDTQMDLYGRYIDVVLRKKLRNEQRFASLDALKQQI 295

Query: 299 GEDEKKARKILES 311
             D   A++  + 
Sbjct: 296 ANDLVAAKEFFKQ 308


>gi|226306129|ref|YP_002766089.1| flavokinase/FAD synthetase [Rhodococcus erythropolis PR4]
 gi|226185246|dbj|BAH33350.1| flavokinase/FAD synthetase [Rhodococcus erythropolis PR4]
          Length = 326

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 90/325 (27%), Positives = 150/325 (46%), Gaps = 18/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  +  ++    +P      V+ IG FDG+H GH  ++ +A+        P  +++F+PH
Sbjct: 1   MLRWRGLD---EVPADWGRCVLTIGVFDGVHRGHAQLIARAVTAARKRGVPSVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++ + +G        FT +    + E+++ ++LVE L V
Sbjct: 58  PMEVVRPGSHPAQLTTLQRRAELAQDLGIDVFCVMPFTADFMKLTPERYVHEILVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK   G+  +L++ G ++GF    +  L    +   SS+ IR+ +  G 
Sbjct: 118 AEVVVGDNFTFGKKALGNVDLLREMGARFGFAVDGVQ-LLAEHAVTFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT- 236
           +  A   LG    +E  V+HG+K GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 MEAATEALGRPHRVEGVVVHGDKRGRELGFPTANVAPPMFSAIPADGVYAAWFTVLGAGE 236

Query: 237 ---------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT        +E+++ D   ++YGQ   V     +R   K
Sbjct: 237 ELGTVVPGRRYQAAVSVGTNPTF-SGRTRTVEAYVLDTEADLYGQHVAVDLVSRIRGMEK 295

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  IE L   M  D ++AR+IL   
Sbjct: 296 FDSIESLITAMNRDVERARQILSED 320


>gi|330961576|gb|EGH61836.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 308

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 103/309 (33%), Positives = 149/309 (48%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGLPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLGAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|254510038|ref|ZP_05122105.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           KLH11]
 gi|221533749|gb|EEE36737.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           KLH11]
          Length = 310

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 116/313 (37%), Positives = 167/313 (53%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  +I+  +      +G  VAIGNFDG+HLGH  +++ A   A ++P+ VL+F PHPR
Sbjct: 1   MKIIRDIQFVEP---EDRGASVAIGNFDGVHLGHQSVIDLAHTAAPDAPLGVLTFEPHPR 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L   + +   L+K+G   L    F    A  + E F + V+ E L +  
Sbjct: 58  EYFAPDAPPFRLMRGNARAHRLQKLGVEKLYELPFNAALAGLTPEAFARNVICEGLGLSH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK R G    L + G + GF    I  L      +VSS+ IR AL++G   
Sbjct: 118 IVVGADFCFGKGRKGTPQDLIRFGAEMGFGVT-IAPLMERSENVVSSTAIRNALSEGRPR 176

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE +V+ GE+ GR LGFPTANM +      + GVYA+     D   Q S
Sbjct: 177 DAAAMLGHWHRIEGEVVGGEQRGRELGFPTANMSIEGLHPPRFGVYAVLVDVLDGPHQGS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P      P  +E+F+FDFS ++YG   +V   DYLRPE+ F  +++L   
Sbjct: 237 YLGAASVGTRPMFHGEVP-NIETFLFDFSGDLYGATLSVGLIDYLRPEMTFSRLDELTAQ 295

Query: 298 MGEDEKKARKILE 310
           M  D  +ARKIL 
Sbjct: 296 MDADCAQARKILA 308


>gi|332140400|ref|YP_004426138.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550422|gb|AEA97140.1| riboflavin biosynthesis protein RibF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 289

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 108/291 (37%), Positives = 152/291 (52%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FDG+H GH  +L   ++ A +   P TV+ F P P  +         +SP   + 
Sbjct: 2   LTIGKFDGVHRGHQAVLANVLEKAKSLSLPATVMVFEPQPEEVFMPDKAPARISPLREKY 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L + G   L+  +F  + A  SA+ F+  +LV+ L VK ++ G  FRFG  R GD  +
Sbjct: 62  ELLRQQGVDRLLAVRFNAQFAQQSADTFVHDLLVDKLGVKFLVVGDDFRFGHGRKGDFKM 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQ  GE+YGF  V       + +  +SS+ +R AL  G    A  +LG  F I   V+HG
Sbjct: 122 LQAAGEQYGFDVVSTHSFTMH-AHRISSTAVREALADGDFGLATEMLGRPFAIHGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           EK GRT+GFPTAN+ L        GV+A+R    D   ++GVAN G  PT+       LE
Sbjct: 181 EKKGRTIGFPTANVMLKRQKTPIHGVFAVRVDV-DGKHFNGVANIGTRPTLNGVRN-QLE 238

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             IFD S ++YG+  TV     +R EIKF   E LK  +  D  KAR +L 
Sbjct: 239 VHIFDLSSDLYGKPITVFPMAKIRDEIKFASFEALKDQIQADAAKARLLLA 289


>gi|300113749|ref|YP_003760324.1| riboflavin biosynthesis protein RibF [Nitrosococcus watsonii C-113]
 gi|299539686|gb|ADJ28003.1| riboflavin biosynthesis protein RibF [Nitrosococcus watsonii C-113]
          Length = 310

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 106/307 (34%), Positives = 156/307 (50%), Gaps = 4/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQ 64
           I    +L +  + GV  IGNFDG+HLGH  +L Q  A       P  +++F P P   + 
Sbjct: 5   IRGLYNLQSCQQSGVATIGNFDGLHLGHQAVLRQLAAKAAELQQPSLLITFEPSPSEFLA 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +     L+    + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G
Sbjct: 65  PAKAPARLTQFREKFEILRAQPVDWMLCLRFNSLLARMEATDFIRIVLVEKLNLRYLVAG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+DR G+  +LQ+ G+ YGF    +  L   K++ +SS+ +R AL +G++  A  
Sbjct: 125 KDFCFGRDRRGNLTLLQRAGKYYGFEVAPMPALCLEKAR-ISSTRVRQALAQGNLSRAEQ 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  + +   VI G+K GRTLGFPTAN+ L        GV+A+     D     GVAN 
Sbjct: 184 LLGRPYRMSGRVIQGDKRGRTLGFPTANIALRRHRTPLTGVFAVEVYGLDYKPLPGVANV 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+      LLE  + DF ++IYG    V F   LRPE +F+ +  L   +  D  +
Sbjct: 244 GVRPTI-GGHRALLEVHLLDFERDIYGCYLQVDFLRQLRPEKRFESLAALGQQIERDCNR 302

Query: 305 ARKILES 311
           ARK   S
Sbjct: 303 ARKFFTS 309


>gi|167031664|ref|YP_001666895.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida GB-1]
 gi|166858152|gb|ABY96559.1| riboflavin biosynthesis protein RibF [Pseudomonas putida GB-1]
          Length = 322

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 7   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L V
Sbjct: 64  PREYFAPETAPARLARLRDKVELLAAEGIDRVLCLAFNQRLSKLSADAFVKAILVDGLGV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G++YGF     + +       VSS+ +R AL++G+
Sbjct: 124 RHLEVGDDFRFGCDRAGDFAFLIEAGKQYGFTVEAANTV-IQDGLRVSSTEVRKALSEGN 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  ++I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 183 FELAEHLLGRPYSITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI-DGKAW 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E LK
Sbjct: 242 PGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLEALK 298


>gi|229490813|ref|ZP_04384648.1| riboflavin biosynthesis protein RibF [Rhodococcus erythropolis
           SK121]
 gi|229322203|gb|EEN87989.1| riboflavin biosynthesis protein RibF [Rhodococcus erythropolis
           SK121]
          Length = 326

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 90/325 (27%), Positives = 150/325 (46%), Gaps = 18/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  +  ++    +P      V+ IG FDG+H GH  ++ +A+        P  +++F+PH
Sbjct: 1   MLRWRGLD---EVPADWGRCVLTIGVFDGVHRGHAQLIARAVTAARKRGVPSVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++ + +G        FT +    + E+++ ++LVE L V
Sbjct: 58  PMEVVRPGSHPAQLTTLQRRAELAQDLGIDVFCVMPFTADFMKLTPERYVHEILVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGK   G+  +L++ G ++GF    +  L    +   SS+ IR+ +  G 
Sbjct: 118 AEVVVGDNFTFGKKALGNVDLLREMGARFGFAVDGVQ-LLAEHAVTFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT- 236
           +  A   LG    +E  V+HG+K GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 MEAATEALGRPHRVEGVVVHGDKRGRELGFPTANVAPPMFSAIPADGVYAAWFTVLGAGE 236

Query: 237 ---------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT        +E+++ D   ++YGQ   V     +R   K
Sbjct: 237 ELGTVVPGRRYQAAVSVGTNPTF-SGRTRTVEAYVLDTEADLYGQHVAVDLVSRIRGMEK 295

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  IE L   M  D ++AR+IL   
Sbjct: 296 FDSIESLITAMNRDVERARRILSED 320


>gi|291280325|ref|YP_003497160.1| riboflavin biosynthesis regulatory protein RibF [Deferribacter
           desulfuricans SSM1]
 gi|290755027|dbj|BAI81404.1| riboflavin biosynthesis regulatory protein RibF [Deferribacter
           desulfuricans SSM1]
          Length = 305

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 10/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  ++   +         ++ IGNFDG+HLGH  I+++ + +A   N    V++F+PH
Sbjct: 1   MEVIKDLSKWK----IDSSTIITIGNFDGVHLGHQTIIKKVLSLAKEFNLKSGVVTFSPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P         I  +     + KI E +G        F    AN   E FI++ LV+ L+ 
Sbjct: 57  PIKFFNKD--IKLIMTERKKIKIFESLGIDYFFNLTFNESIANMDPEIFIREFLVKSLKA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  +RFG+ R GD  +L+    KYG+    I  ++ +   IVSS+NIR+ L+KG 
Sbjct: 115 SFIVVGYDYRFGRKRKGDYELLKMLETKYGYTAFKIPPVKIDD-IIVSSTNIRSLLSKGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A  +LG  FT+E  V+ G+  GR LG+PTAN+ +  +++   G+YA +    +   Y
Sbjct: 174 VELANKMLGRPFTLEGVVVKGDGYGRLLGYPTANLSVKNELIPANGIYATK-TIINNKKY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V N G  PT+V    + +E+ IFDF ++IY     V F  Y+R E KF+D+  L   +
Sbjct: 233 LSVTNIGIRPTLVNKNEVRVETHIFDFDEDIYDNFIEVEFHSYIREEKKFEDVNSLIKQI 292

Query: 299 GEDEKKARKIL 309
            +D +KA++IL
Sbjct: 293 QKDCEKAKEIL 303


>gi|323700578|ref|ZP_08112490.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. ND132]
 gi|323460510|gb|EGB16375.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           ND132]
          Length = 327

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 113/329 (34%), Positives = 177/329 (53%), Gaps = 12/329 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V   I   Q +   + G  V IGNFDG+H GH  ++  A + A    +   V++F+PH
Sbjct: 1   MIVARTI---QDIQGVIAGSCVTIGNFDGVHKGHQKLIALACERAKARDLTSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++++      ++    + +++ + G    +  +FT++ A  S E+F++  LV+ L+V
Sbjct: 58  PLRVLRNDRTPPFITLTEQKLELISQYGPQVCLLLEFTMDMARLSPEEFVKTYLVDGLKV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  +  GK RAG+   L + G KYGF    +D +  + + IVSS+ IR  +  GH
Sbjct: 118 KDMIIGYDYHLGKGRAGNFETLCELGGKYGFTVDRLDPVTIDNA-IVSSTRIRDLVQAGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V     LLG  + +  +V+HG   G   LGFPTAN++L  ++  K GVYAI     D   
Sbjct: 177 VWAVRPLLGRFYQVTGEVVHGMNRGGKLLGFPTANLKLVDELFPKPGVYAIWAEV-DGAV 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G+NPT   N  L +E+ + DFS +IYG    V F   +R E KF  +++LK  
Sbjct: 236 YEGVANIGKNPTF-GNDVLSVEAHLLDFSGDIYGDVIRVHFVQRIRDEKKFNGLDELKDR 294

Query: 298 MGEDEKKARKIL---ESSYPLSERDRIIC 323
           + +D +  R+IL   E++  L+  D   C
Sbjct: 295 IAKDVELGRRILAQPEAAIKLTHPDFHRC 323


>gi|307244846|ref|ZP_07526945.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307253800|ref|ZP_07535654.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258256|ref|ZP_07539999.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306854291|gb|EFM86497.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306863284|gb|EFM95224.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867716|gb|EFM99561.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 341

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 118/319 (36%), Positives = 174/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 82  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  FRFG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 142 LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  I   +GV+A++ +
Sbjct: 201 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLITPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|146278232|ref|YP_001168391.1| riboflavin biosynthesis protein RibF [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556473|gb|ABP71086.1| FMN adenylyltransferase / riboflavin kinase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 306

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 176/314 (56%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++++    Q L    +G  +A+GNFDG+HLGH  +++ A       P+ +++F PHPR
Sbjct: 1   MRIYNHW---QGLEASDRGASIAMGNFDGVHLGHQHVIDLAR---GRGPLGIVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +    +P F L     +   L K+G   L    FT + A  + E+F + VL   L V  
Sbjct: 55  EVFAPDAPPFRLMNAGARANRLAKLGIERLYELPFTRDLAALTPEEFARDVLANGLGVAH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK R+G    L   G ++GF     D L+    + +SS+ IRTAL++G   
Sbjct: 115 VVVGADFCFGKGRSGTTADLVDLGRRHGFDVTIADLLKVEHLE-ISSTAIRTALSEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTS 237
           +AA +LG+   IE +V+HG+K GR LG+PTANM +S   L + GVYA++       ++ S
Sbjct: 174 DAAAMLGHWHRIEGEVLHGDKRGRDLGYPTANMSVSGLHLPRLGVYAVKVDVLTGPEKGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G A+ G  P    N P  LES +FDFS ++YGQ  +V+F DYLRPE+ F D+  L   
Sbjct: 234 YAGAASLGVRPMFGTNRP-NLESHLFDFSGDLYGQHLSVAFVDYLRPEMVFDDLPGLVAQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR I+ S
Sbjct: 293 MDADCARARDIVGS 306


>gi|220907792|ref|YP_002483103.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7425]
 gi|219864403|gb|ACL44742.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7425]
          Length = 311

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 100/307 (32%), Positives = 157/307 (51%), Gaps = 6/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQS 65
           + I  +L   L   ++A+GNFDG+H GH  ++     +    + +TV++F+PHP+     
Sbjct: 1   MWITSTLQTVLTPTILALGNFDGVHRGHQQVIASLQDLDIEAAYLTVVAFDPHPQEFFTG 60

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
             P   L+PP  + ++L ++G   L+   F    A+ S + F+++VLV  L+ K +  G 
Sbjct: 61  -KPRLLLTPPEEKGQVLARLGVDQLVLLPFNERLASLSPQDFVEEVLVRQLQAKAISVGF 119

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG  RAG    L       G     +   +  + + +SSS IR  L +G V  A  L
Sbjct: 120 NFCFGYQRAGTTEDLVAIATPAGVRVTIVPP-QQFEQERISSSAIRKFLAEGAVERANQL 178

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS-GVAN 243
           LG  +T+   VI G++ GR LGFPTAN++L     L + GVYA+R           GV N
Sbjct: 179 LGRPYTLIGRVIGGDRRGRQLGFPTANLELPANKFLPQPGVYAVRVTGDGLGQQQFGVMN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+   G   +E  + D+S ++YGQ  TV    +LRPE +F  +E L+  +  D +
Sbjct: 239 LGCRPTVQGTGT-AVEVHLLDWSGDLYGQSLTVYLEKFLRPEQRFPSLEALQAQIRVDCQ 297

Query: 304 KARKILE 310
            AR + +
Sbjct: 298 TARHLFD 304


>gi|303251868|ref|ZP_07338039.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302649298|gb|EFL79483.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 320

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 117/319 (36%), Positives = 174/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 61  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  FRFG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 121 LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 180 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 240 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 297

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 298 EALKAQIEKDREQAVEFFK 316


>gi|170723721|ref|YP_001751409.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida W619]
 gi|169761724|gb|ACA75040.1| riboflavin biosynthesis protein RibF [Pseudomonas putida W619]
          Length = 316

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 154/297 (51%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +N SA++F++ +LV+ L V
Sbjct: 58  PREYFAPDTAPARLARLRDKVELLAGEGIDRVLCLAFNQRLSNLSADEFVEAILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G++YGF     + +       VSS+ +R AL++G+
Sbjct: 118 RHLEVGDDFRFGCDRAGDFTFLIEAGKQYGFTVEAANTV-IQDGLRVSSTEVRQALSEGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  ++I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 177 FELAEHLLGRPYSITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E LK
Sbjct: 236 PGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|26987339|ref|NP_742764.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida KT2440]
 gi|24981990|gb|AAN66228.1|AE016251_4 riboflavin biosynthesis protein RibF [Pseudomonas putida KT2440]
          Length = 316

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 148/297 (49%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L V
Sbjct: 58  PREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNQRLSKLSADAFVKAILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G  YGF     + +       VSS+ +R AL++G 
Sbjct: 118 RHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTV-IQDGLRVSSTEVRKALSEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 177 FELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIVI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E LK
Sbjct: 236 PGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|307247021|ref|ZP_07529075.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306856473|gb|EFM88622.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 341

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 117/319 (36%), Positives = 174/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 82  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  FRFG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 142 LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 201 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|219871120|ref|YP_002475495.1| riboflavin biosynthesis protein [Haemophilus parasuis SH0165]
 gi|219691324|gb|ACL32547.1| riboflavin biosynthesis protein [Haemophilus parasuis SH0165]
          Length = 325

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 163/318 (51%), Gaps = 9/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +       +  KG  + IGNFDG+HLGH  IL++ ++ AN    P  V+ F P 
Sbjct: 11  MQLIRGVHNLAHCADFSKGCALTIGNFDGVHLGHQQILKRLLEKANTLRLPSVVMIFEPQ 70

Query: 59  PRTIIQSSS----PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PR               L     +   L+++G   L+  +F  + A    EQFI+ +LV+
Sbjct: 71  PREFFAKKQDKLTAPARLMRLRDKIHALQEIGVDYLLCVRFNSQFAQLQPEQFIRHLLVD 130

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L VK +  G  F+FG  R+G    LQ+ G+++GF             Q +SSS IR AL
Sbjct: 131 KLNVKYLSVGDDFQFGYKRSGTFDSLQQAGKQFGFDVEN-SHSHCLGQQRISSSLIRDAL 189

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
              ++  A  +LG  + I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++ +T  
Sbjct: 190 HNDNLQLAEKMLGKPYAICGRVAHGNKLGRTIGFPTANLMLNRLVTAIQGVYAVKVKTP- 248

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              ++G+AN G  PT+    P LLE  +FDF   IYGQ   V F   +R EIKF   ++L
Sbjct: 249 AGVFNGIANVGNRPTINGTKP-LLEVHLFDFDNSIYGQAIEVRFLKKVRSEIKFASFDEL 307

Query: 295 KIYMGEDEKKARKILESS 312
           K+ + +D +  R   + +
Sbjct: 308 KLQIEKDVQAVRLFFQEA 325


>gi|237809690|ref|YP_002894130.1| riboflavin biosynthesis protein RibF [Tolumonas auensis DSM 9187]
 gi|237501951|gb|ACQ94544.1| riboflavin biosynthesis protein RibF [Tolumonas auensis DSM 9187]
          Length = 317

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L   QA       P  V+ F P 
Sbjct: 1   MELIRGI---HNLHPEHAGCVLTIGNFDGVHRGHQAVLSRLQARAQQLGLPSCVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            LS    + + +  +G   L+  KF    A  SA QFI+++LV  L V
Sbjct: 58  PLEFFARDKAPARLSRLRDKYEAIASLGIDRLLCVKFDHTFAELSAAQFIEQILVRKLSV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R+GD  +L + G+++GF  +  D L +++ Q VSS+ +R AL  G 
Sbjct: 118 RFLVIGDDFRFGLHRSGDFALLVEAGKRHGFQVLSTDTLLHDQ-QRVSSTLLREALRDGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +   +LG+ ++I   V HG K+GRT+GFPTAN+ L   ++  +GVYA++        +
Sbjct: 177 LADVELMLGHPYSISGRVAHGAKLGRTIGFPTANIHLKRLVVPIQGVYAVQILIAG-KMH 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  IFDF  ++YG++  +     LR E KF     L+  +
Sbjct: 236 FGVANIGFRPTV-SGTRSQLEVHIFDFKDDLYGKQLQIRVCHKLRDEQKFPSFTALQTQI 294

Query: 299 GEDEKKARKIL 309
             D ++AR+  
Sbjct: 295 TADARQARQWF 305


>gi|77165500|ref|YP_344025.1| FMN adenylyltransferase, riboflavin kinase [Nitrosococcus oceani
           ATCC 19707]
 gi|76883814|gb|ABA58495.1| FMN adenylyltransferase [Nitrosococcus oceani ATCC 19707]
          Length = 310

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 107/307 (34%), Positives = 155/307 (50%), Gaps = 4/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQ 64
           I    +L +H + GV  IGNFDG+HLGH  +L Q  A       P  +++F P P   + 
Sbjct: 5   IRGLYNLQSHQQSGVATIGNFDGLHLGHQAVLRQLAAKAAELQRPSLLITFEPPPSEFLA 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +     L+    + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G
Sbjct: 65  PAKAPARLTQFREKFEILRAQPVDWMLCLRFNSFLARMEAADFIRMVLVERLRLRYLVAG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+DR G+  +LQ+ G+ YGF    +  L    ++ VSS+ IR AL +G++  A  
Sbjct: 125 KDFCFGRDRRGNLTLLQRAGKYYGFEVAPMPALCVEGAR-VSSTRIRQALAQGNLSRAEQ 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  + +   VI G+K GRTLGFPTAN+ L    +   GV+A+     D     GVAN 
Sbjct: 184 LLGRPYRMSGRVIQGDKRGRTLGFPTANIALRRHRMPLTGVFAVEVYGLDNEPLPGVANV 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+      LLE  + DF ++IYG+   V F   LRPE  F+ +  L   +  D   
Sbjct: 244 GVRPTI-GGRRALLEVHLLDFERDIYGRYLQVDFLRQLRPEKCFESLAALGQQIERDCGV 302

Query: 305 ARKILES 311
           AR    S
Sbjct: 303 ARDFFTS 309


>gi|28868033|ref|NP_790652.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851269|gb|AAO54347.1| riboflavin biosynthesis protein RibF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|331018367|gb|EGH98423.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 308

 Score =  330 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P   + F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCAVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA  F++ VL++ L V
Sbjct: 58  PREFFAPQTAPARLARLRDKLELLGAEGVDRVLCLSFNQRLSKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGYDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GLRVSSTKVRKALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D   +
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSMDI-DGKPW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++YG+R TV+F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGSAHLEVHLLDFAGDLYGRRLTVAFHHKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARK 307
             D   AR 
Sbjct: 296 NADVAAARA 304


>gi|302343157|ref|YP_003807686.1| riboflavin biosynthesis protein RibF [Desulfarculus baarsii DSM
           2075]
 gi|301639770|gb|ADK85092.1| riboflavin biosynthesis protein RibF [Desulfarculus baarsii DSM
           2075]
          Length = 316

 Score =  330 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   +E    L       VV IGNFDG+HLGH  +  +A + A         ++F PH
Sbjct: 1   MIVLRGLE---ELRQKYPSPVVTIGNFDGVHLGHQALFAKARERALALGGASLAMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++ +  +  ++P   + +++E  G    +  +F    A  SA+ F+ K+LV  L  
Sbjct: 58  PMRVLRPAVNLPLITPLEQKLQLIEAQGVDVALCVQFDAGFAALSADDFVDKLLVARLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG    GD  +LQ++G ++GF    +  +  +  + VSS+ +R  +  GH
Sbjct: 118 AEVVVGYDFSFGHRGLGDLELLQQKGAQHGFAVHVVGPVLVD-GRAVSSTRVRQEVGAGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  + I   V+ G   G   +GF TAN+++S ++L  EGVYA+  +      
Sbjct: 177 LAEARKLLGRNYRIAGTVVSGHGRGAKVVGFATANIKVSDELLPAEGVYAVLVQDDQGKL 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GV N G NPT   +  L +E+ + D+  ++YG+   V F +YLR E KF   ++LK  
Sbjct: 237 HKGVTNIGNNPTFA-DAQLSVETHLLDYHGDLYGKHIVVIFIEYLRGEQKFASADELKAQ 295

Query: 298 MGEDEKKARKILESS 312
           + +D ++A  +L+  
Sbjct: 296 IAKDIQRAHCVLDQD 310


>gi|71278470|ref|YP_267924.1| riboflavin biosynthesis protein RibF [Colwellia psychrerythraea
           34H]
 gi|71144210|gb|AAZ24683.1| riboflavin biosynthesis protein RibF [Colwellia psychrerythraea
           34H]
          Length = 306

 Score =  330 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 108/312 (34%), Positives = 165/312 (52%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  +    V+ IGNFDG+HLGH  +++  +  A   N    VL F P 
Sbjct: 1   MQLVRGI---HNIQLNDHSCVLTIGNFDGVHLGHQQVIKALVSKAKALNCVAAVLVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +    +    L     +  +L K+G   LI   FT + AN SA+ FI+ +LV  L +
Sbjct: 58  PQELFSPETAPARLCRLRDKYNLLAKLGVQRLICVNFTAKFANQSAKHFIENLLVAKLGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F FGK+R G+  +L++ GEK+GF        +    + +SS+ IR AL +  
Sbjct: 118 KHLIVGDDFHFGKNRTGNFSMLRQAGEKFGFDVSDTASYKMADCR-ISSTAIRQALEQDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +++   +LG  ++I   V HG+K GR LGFPTAN+ L   +    GV+A+  +T D   +
Sbjct: 177 LVSVKQMLGREYSIIGRVFHGDKRGRQLGFPTANVLLKRRVSPLSGVFAVMVKTND-GEF 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  IFDF + +YGQ   V     LRP IKF  +E L   +
Sbjct: 236 KGVANIGARPTVNGI-RQQLEVHIFDFDENLYGQCIEVVVKRKLRPVIKFDSLEALTAQI 294

Query: 299 GEDEKKARKILE 310
            +D ++A+++L 
Sbjct: 295 RQDSEQAKQVLA 306


>gi|240948304|ref|ZP_04752690.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
 gi|240297343|gb|EER47884.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
          Length = 324

 Score =  330 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 118/327 (36%), Positives = 173/327 (52%), Gaps = 11/327 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        + P   +G  ++IGNFDG+HLGH  IL +  + A   N P  V+ F P 
Sbjct: 1   MQLVRGFHNLANNPIFQQGCALSIGNFDGVHLGHQNILARLNEKAKALNLPSVVMVFEPQ 60

Query: 59  PRTIIQSSS------PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           PR      S      P   L     + K LEK G   ++  +F+ + A  +A +FI+K+L
Sbjct: 61  PREFFAKKSGNLTANPPARLMRLRDKLKYLEKAGVDFVLCVRFSAQFAKLTAHEFIEKLL 120

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           VE L V+ +  G  F FG DR+G+   L   G+  GF         + +S+ +SSS IR 
Sbjct: 121 VERLNVRYLSVGDDFHFGSDRSGNYQTLLNAGKTLGFEVEE-SHTHSFESERISSSLIRE 179

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+K  +  AA LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++  T
Sbjct: 180 ALSKDELTLAAKLLGKPYSIAGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVYAVKIET 239

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           +    YSG+AN G  PT+    P LLE  +FDF+  IYGQ   V F   +R EIKF    
Sbjct: 240 K-YGIYSGIANVGNRPTINGTKP-LLEVHLFDFNHSIYGQAIEVLFLKKIRAEIKFASFN 297

Query: 293 KLKIYMGEDEKKARKILESSYPLSERD 319
           +L+  + +D ++A +    + P+   D
Sbjct: 298 ELRQQIEQDREQAVRFFRGNDPVLFLD 324


>gi|182678310|ref|YP_001832456.1| riboflavin biosynthesis protein RibF [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634193|gb|ACB94967.1| riboflavin biosynthesis protein RibF [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 326

 Score =  330 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 114/309 (36%), Positives = 177/309 (57%), Gaps = 9/309 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           Q  P  L G V+AIGNFDG+H GH  ++++A  +A     P  VL+F PHP         
Sbjct: 17  QEPPAGLAGAVIAIGNFDGVHRGHLAVIKRAEALAARLGRPCAVLTFEPHPTDYFSGDHS 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +F L+P   + K LE++G   +I   F    A+ +AE F+ ++L+  L V  V+ G  F 
Sbjct: 77  VFRLTPLKDKAKTLERLGLDGMIVIPFNAGLASLAAEDFVTEILLRRLAVSAVVAGYDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           FG  R G    L++ G+++GF    ++ +     N ++  SS+  R AL  G V +A HL
Sbjct: 137 FGAGRKGTPDFLKQAGQRHGFEVEIVERIASDAENSTEAASSTGTRLALETGDVDHATHL 196

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS---YSGVA 242
           LG+ +TI  +V+HG+++GR LGFPTAN++  P   L+ GVYA+R   + +     + GVA
Sbjct: 197 LGHPYTITGEVLHGQELGRQLGFPTANLRPDPSCRLRHGVYAVRALIEGEVPERMHEGVA 256

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N+GR PT+  +G  LLE F+ DF+ ++Y +   V F  ++R E KF  ++ LK  + +D 
Sbjct: 257 NYGRRPTV-DHGAPLLEIFLLDFTGDLYSKIVEVFFIGFIRGEEKFASLDALKAQIAKDV 315

Query: 303 KKARKILES 311
           + AR IL+ 
Sbjct: 316 ESARAILKK 324


>gi|126736557|ref|ZP_01752297.1| riboflavin biosynthesis protein RibF [Roseobacter sp. CCS2]
 gi|126713870|gb|EBA10741.1| riboflavin biosynthesis protein RibF [Roseobacter sp. CCS2]
          Length = 313

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 113/316 (35%), Positives = 163/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           MH+  +      +    +G   AIGNFDG+H+GH  +++   K A   N+P+ +++F PH
Sbjct: 1   MHIIRD---TIYIDPADRGAAAAIGNFDGVHIGHQAVIDLTRKAAKAVNAPLGIMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+        F L     +   L K+G   L    F    A  S   F Q ++ + L +
Sbjct: 58  PRSYFSRDPNPFRLMNAEARANRLAKLGVEKLYEVPFNEALAGLSPRAFAQTIIADQLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FGK RAG    LQ  G + GF    I  +    +  VSS+ IR ALT G 
Sbjct: 118 KHVVVGADFCFGKGRAGTVDDLQTFGTEMGFGVT-IAPIVAIDTANVSSTAIRQALTDGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   IE +VI G++ GR LG+PTANM +      K GVYA++    D   +
Sbjct: 177 PRDAAAMLGHWHRIEGEVIRGDQRGRDLGYPTANMSIMDLHPPKFGVYAVKVDMLDGPHK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +Y G A+ G  P    N P   E+FIFDF  ++YG   +V+  D+LRPE+KF D++ L 
Sbjct: 237 GTYDGAASIGVRPMFGENIP-NCETFIFDFKGDLYGSTLSVALVDFLRPELKFGDLDALI 295

Query: 296 IYMGEDEKKARKILES 311
             M  D   A++IL  
Sbjct: 296 TQMDADCVSAKEILAD 311


>gi|254434309|ref|ZP_05047817.1| riboflavin biosynthesis protein RibF [Nitrosococcus oceani AFC27]
 gi|207090642|gb|EDZ67913.1| riboflavin biosynthesis protein RibF [Nitrosococcus oceani AFC27]
          Length = 325

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 107/307 (34%), Positives = 155/307 (50%), Gaps = 4/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQ 64
           I    +L +H + GV  IGNFDG+HLGH  +L Q  A       P  +++F P P   + 
Sbjct: 20  IRGLYNLQSHQQSGVATIGNFDGLHLGHQAVLRQLAAKAAELQRPSLLITFEPPPSEFLA 79

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +     L+    + +IL       ++  +F    A   A  FI+ VLVE L ++ ++ G
Sbjct: 80  PAKAPARLTQFREKFEILRAQPVDWMLCLRFNSFLARMEAADFIRMVLVERLRLRYLVAG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+DR G+  +LQ+ G+ YGF    +  L    ++ VSS+ IR AL +G++  A  
Sbjct: 140 KDFCFGRDRRGNLTLLQRAGKYYGFEVAPMPALCVEGAR-VSSTRIRQALAQGNLSRAEQ 198

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  + +   VI G+K GRTLGFPTAN+ L    +   GV+A+     D     GVAN 
Sbjct: 199 LLGRPYRMSGRVIQGDKRGRTLGFPTANIALRRHRMPLTGVFAVEVYGLDNEPLPGVANV 258

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+      LLE  + DF ++IYG+   V F   LRPE  F+ +  L   +  D   
Sbjct: 259 GVRPTI-GGRRALLEVHLLDFERDIYGRYLQVDFLRQLRPEKCFESLAALGQQIERDCGV 317

Query: 305 ARKILES 311
           AR    S
Sbjct: 318 ARDFFTS 324


>gi|303257733|ref|ZP_07343745.1| riboflavin biosynthesis protein RibF [Burkholderiales bacterium
           1_1_47]
 gi|302859703|gb|EFL82782.1| riboflavin biosynthesis protein RibF [Burkholderiales bacterium
           1_1_47]
          Length = 345

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 11/314 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHP 59
            VF  +      P       VAIGNFDG+H GH  +L + ++ A+   +   VL+F PHP
Sbjct: 33  KVFRGL----PSPEERLDCAVAIGNFDGVHRGHQALLHEVVEAAHARLLCPAVLTFEPHP 88

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R           +S    + + +E  G   +   +F    A+ S   F++++LV+ L  +
Sbjct: 89  REFFNPEDAPRRISSLHDKVEAIEACGIQRVYILRFNEHLASLSPCDFVKEILVDGLHAR 148

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  FRFG  RAGD  +L++ G+++ F    +  L +  +  +SSS IR AL +G +
Sbjct: 149 WVTVGENFRFGDKRAGDIKLLEQLGKEFHFEVHPMPMLFHTHA-PISSSRIRHALAEGDI 207

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRTQDQ 235
             A ++LG  + I   V+HG+++GRTLGFPT N ++ P         EGVYA++      
Sbjct: 208 PTANYMLGRPYMISGRVLHGKQLGRTLGFPTINQRILPPHSKAKPAIEGVYAVKAHGIGP 267

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVA  GR PT+  +G  LLE+ +F+F  ++Y Q   V FF  +R E KF  +E+L+
Sbjct: 268 RPIEGVACVGRRPTVDDHGEYLLETHLFNFHGDLYDQDVKVEFFSKIRDEKKFCSLEELR 327

Query: 296 IYMGEDEKKARKIL 309
             + +D+ KA++IL
Sbjct: 328 AAIADDQLKAKQIL 341


>gi|32033772|ref|ZP_00134057.1| COG0196: FAD synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126207533|ref|YP_001052758.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           L20]
 gi|126096325|gb|ABN73153.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 320

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 117/319 (36%), Positives = 174/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 61  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  FRFG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 121 LVKQLRVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 180 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 240 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 297

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 298 EALKAQIEKDREQAFEFFK 316


>gi|297183628|gb|ADI19754.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 312

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 144/313 (46%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        +L +  +G  V IG FDG+HLGH  +L    K A     P TV++F P 
Sbjct: 2   MQLIRG---QHNLRSQHRGCAVTIGAFDGVHLGHQAVLAHLKKQALLLGIPTTVVTFEPL 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  +        ++    +  +LE  G   ++   F       +A QF++++ V+ L  
Sbjct: 59  PREYLTPLEAPPRITTLRDKWPLLEACGVDRVLCLPFNERLRQLTARQFVEQIFVDGLGA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG  R GD   ++   +++G+       L     + VSS+ IR AL  G 
Sbjct: 119 QYLAFGDDFHFGNQREGDLEYVRALADEFGYAVAPTATLEA-AGERVSSTRIRAALDAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
             +AA LLG  F +   V HG+K+GR L  PTAN+ L        GVYA+          
Sbjct: 178 FDDAARLLGRPFELAGRVQHGQKLGRQLDAPTANIALHRIRSPLHGVYAVSVWGGGLERA 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  + + S ++YG+R TV F   LR E KF  +E LK  +
Sbjct: 238 HGVANVGVKPTIGECLEATLEVHVLEGSPDLYGERLTVRFRHKLREEQKFPSLEALKAGI 297

Query: 299 GEDEKKARKILES 311
             D+  A   L  
Sbjct: 298 KADKANASAWLSD 310


>gi|85375539|ref|YP_459601.1| riboflavin biosynthesis protein [Erythrobacter litoralis HTCC2594]
 gi|84788622|gb|ABC64804.1| riboflavin biosynthesis protein [Erythrobacter litoralis HTCC2594]
          Length = 315

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 105/312 (33%), Positives = 166/312 (53%), Gaps = 7/312 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTI 62
             ++    +P  L+G ++A+GNFDG H GH  +  +AI    A   P  + +F+PHP   
Sbjct: 2   RWLDHRNPVPESLRGAIIALGNFDGFHRGHQAVAGEAIDWAHAEGRPSIIATFDPHPVRF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  +P F L+    ++++    G +A++ + F  E A+ SAE FI ++L++ L    V+
Sbjct: 62  FRPDTPPFRLTTLEQRQELYIAAGATAMLVFHFDKELASTSAEDFITEILIDRLGAHGVV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALTKGHV 179
           TG  F FG+   G+  +L+  G + G  +  ++ + +       ++SSS IR AL  G  
Sbjct: 122 TGGDFTFGQGAKGNVDLLKSFGGERGLESRVVEPVEDAGLGNGGVISSSRIREALRDGDC 181

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-Y 238
             A  LL   F I   V HG+K GR +G+PTAN+ +   +  + G+YA+  R        
Sbjct: 182 ATATELLSRPFAIRGVVEHGDKRGREIGYPTANLHIESYLRPRYGIYAVTGRILATGQEL 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G AN G  P   P    LLE + FDFS ++YGQ   VSF  +LRPE KF  +E L   M
Sbjct: 242 TGAANIGIRPQFEPPKE-LLEPYFFDFSGDLYGQEIEVSFHHFLRPEAKFDSLEALMAQM 300

Query: 299 GEDEKKARKILE 310
            +D ++AR++L 
Sbjct: 301 EKDCERARELLA 312


>gi|313496977|gb|ADR58343.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida BIRD-1]
          Length = 316

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 148/297 (49%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L V
Sbjct: 58  PREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNHRLSKLSADAFVKAILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G  YGF     + +       VSS+ +R AL++G 
Sbjct: 118 RHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTV-IQDGLRVSSTEVRKALSEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 177 FELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIVI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E LK
Sbjct: 236 PGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|303250524|ref|ZP_07336721.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650512|gb|EFL80671.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 320

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 61  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  F FG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 121 LVKQLRVRYLSVGDDFHFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 180 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 240 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 297

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 298 EALKAQIEKDREQAVEFFK 316


>gi|307260497|ref|ZP_07542191.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869809|gb|EFN01592.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 341

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 82  PREFFANKQANSTACITPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  F FG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 142 LVKQLRVRYLSVGDDFHFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 201 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|331000982|ref|ZP_08324618.1| riboflavin biosynthesis protein RibF [Parasutterella
           excrementihominis YIT 11859]
 gi|329569757|gb|EGG51521.1| riboflavin biosynthesis protein RibF [Parasutterella
           excrementihominis YIT 11859]
          Length = 315

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 11/314 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHP 59
            VF  +      P       VAIGNFDG+H GH  +L + ++ A+   +   VL+F PHP
Sbjct: 3   KVFRGL----PSPEERLDCAVAIGNFDGVHRGHQALLHEVVEAAHARLLCPAVLTFEPHP 58

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R           +S    + + +E  G   +   +F    A+ S   F++++LV+ L  +
Sbjct: 59  REFFNPEDAPRRISSLHDKVEAIEACGIQRVYILRFNEHLASLSPCDFVKEILVDGLHAR 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  FRFG  RAGD  +L++ G+++ F    +  L +  +  +SSS IR AL +G +
Sbjct: 119 WVTVGENFRFGDKRAGDIKLLEQLGKEFHFEVHPMPMLFHTHA-PISSSRIRHALAEGDI 177

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRTQDQ 235
             A ++LG  + I   V+HG+++GRTLGFPT N ++ P         EGVYA++      
Sbjct: 178 PTANYMLGRPYMISGRVLHGKQLGRTLGFPTINQRILPPHSKAKPAIEGVYAVKAHGIGP 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVA  GR PT+  +G  LLE+ +F+F  ++Y Q   V FF  +R E KF  +E+L+
Sbjct: 238 RPIEGVACVGRRPTVDDHGEYLLETHLFNFHGDLYDQDVKVEFFSKIRDEKKFCSLEELR 297

Query: 296 IYMGEDEKKARKIL 309
             + +D+ KA++IL
Sbjct: 298 AAIADDQLKAKQIL 311


>gi|78484839|ref|YP_390764.1| riboflavin biosynthesis protein RibF [Thiomicrospira crunogena
           XCL-2]
 gi|78363125|gb|ABB41090.1| riboflavin kinase / FMN adenylyltransferase [Thiomicrospira
           crunogena XCL-2]
          Length = 321

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 155/311 (49%), Gaps = 5/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNP 57
           MH+   ++   ++   L+ G V+ IGNFDGIHLGH  IL+Q I    +   P  V+ F P
Sbjct: 1   MHLIRGLQNLDTVKTELQAGCVLTIGNFDGIHLGHRAILDQVINLAKSKRLPSVVMIFEP 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P       +    L     +    +      ++  +F    AN +  QF++ VL E L 
Sbjct: 61  LPIEYFAPQTAPVRLMNLREKLSAFKATDIDYVLVCRFNEAFANLTPMQFVESVLKEGLN 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ ++ G  F FGK R G+   L ++G   GF    +     + ++ VSS+ +R AL   
Sbjct: 121 VRHLVVGDDFCFGKQRQGNFDFLDEQGRCLGFEVTDVATFEVDGAR-VSSTRVRQALLMH 179

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  LLG  F     VIHG+K+GR +GF T N+      +  +GVYA+         
Sbjct: 180 DLAMAERLLGEPFHFHGRVIHGQKLGRKIGFRTLNLNPKRIQMPLDGVYAVNVSGLAAQD 239

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GVAN G  PT+  + P  +E  +FD+ +++YG   +V    Y+R E+KF+++ +L   
Sbjct: 240 WPGVANIGIRPTVDGSRP-SIEVHLFDWDKDVYGAHISVRIEHYIRAEMKFENLTQLTEQ 298

Query: 298 MGEDEKKARKI 308
           +  D ++AR+ 
Sbjct: 299 IERDAQEARQF 309


>gi|315126083|ref|YP_004068086.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315014597|gb|ADT67935.1| riboflavin kinase / FMN adenylyltransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 308

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 106/311 (34%), Positives = 159/311 (51%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L+  +     NN P TV+ F P 
Sbjct: 1   MELIRGI---HNIRPQHFGCVLTIGNFDGVHLGHAAVLKGLLADAKENNLPSTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     ++    L+    + ++L  +G   +I   F    AN  AEQF+  +L++ L V
Sbjct: 58  PQEFFAKNNAPARLTRLRDKLRLLSNLGIERVICISFNQAFANMHAEQFVSDILIKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFGK R G+  +L   G + G         R   ++ VSS+ IR AL +G 
Sbjct: 118 KALTVGDDFRFGKQRQGNFSLLATMGTQAGMSVKSTASFRQLNAR-VSSTLIREALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +++A  +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  +
Sbjct: 177 LVSAKVMLGHNYAISGRVIHGWKKGRELGFRTANIALKRQVCPVNGVFAVQVMIAGKQVF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT       LLE  +FDF+Q+IYGQ   V   + LR E KF+ + +L   +
Sbjct: 237 -GVANIGNKPTFN-GTRALLEVHLFDFAQDIYGQFMHVELIEKLRNEKKFETLTQLTAQI 294

Query: 299 GEDEKKARKIL 309
             D   A++  
Sbjct: 295 ATDVAAAKQCF 305


>gi|307251566|ref|ZP_07533473.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861030|gb|EFM93036.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 341

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI+++
Sbjct: 82  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADAFIREL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L V+ +  G  F FG +R GD  +L+  G KY F       L N+  Q VSSS IR
Sbjct: 142 LVKQLRVRYLSVGDDFHFGANRTGDFALLRNAGLKYRFAVEDSQTL-NHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL +  ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 201 TALQQDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|119470025|ref|ZP_01612830.1| bifunctional protein [Alteromonadales bacterium TW-7]
 gi|119446735|gb|EAW28008.1| bifunctional protein [Alteromonadales bacterium TW-7]
          Length = 316

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 108/321 (33%), Positives = 166/321 (51%), Gaps = 9/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L+  +    A+N P TVL F P 
Sbjct: 1   MELIRGI---HNIRPHHFGCVLTIGNFDGVHLGHAQVLKGLLADAKAHNLPSTVLLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     ++    L+    + ++L  +G   +I   F    AN  AEQF+ ++L++ L V
Sbjct: 58  PQEFFAKNNAPARLTRLRDKLRLLSDLGIERVICISFNQRFANMHAEQFVNEILIKKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG+ R G+  +L   G++ G             ++ VSS+ IR AL  G+
Sbjct: 118 KALTVGDDFRFGQQRKGNFNLLVNMGKQAGMDVQSTASFHQLNAR-VSSTLIREALACGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  +LG+ + I   VIHG K GR LGF TAN+ L   +    GV+A++     +  +
Sbjct: 177 LADAKVMLGHNYAISGRVIHGWKRGRELGFRTANIALKRQVCPVNGVFAVQATIAGKQVF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT       LLE  +FDF+Q+IYGQ   V     LR E KF+ + +L   +
Sbjct: 237 -GVANIGNKPTFN-GTRALLEVHLFDFAQDIYGQFMHVELIQKLRDEKKFETLTQLTAQI 294

Query: 299 GEDEKKARKILESSYPLSERD 319
             D   A++    +  +++RD
Sbjct: 295 ATDVAAAKQCFGLNQ-VADRD 314


>gi|148545893|ref|YP_001265995.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           putida F1]
 gi|148509951|gb|ABQ76811.1| riboflavin kinase / FMN adenylyltransferase [Pseudomonas putida F1]
          Length = 322

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 7   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVIFEPQ 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA+ F++ +LV+ L V
Sbjct: 64  PREYFAPDTAPARLARLRDKIELLATEGIDRVLCLAFNHRLSKLSADAFVKAILVDGLGV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G  YGF     + +       VSS+ +R AL++G+
Sbjct: 124 RHLEVGDDFRFGCDRAGDFAFLVEAGNAYGFTVEAANTV-IQDGLRVSSTEVRKALSEGN 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 183 FELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIVI-DGKAW 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + DF+ ++YG+R TV F   LR E +F  +E LK
Sbjct: 242 PGVGNIGVRPTVAGDGRPHLEIHLLDFAGDLYGRRLTVEFHHKLREEQRFASLEALK 298


>gi|331698428|ref|YP_004334667.1| riboflavin biosynthesis protein RibF [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953117|gb|AEA26814.1| riboflavin biosynthesis protein RibF [Pseudonocardia dioxanivorans
           CB1190]
          Length = 308

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E   ++P      VV IG FDG+H GH  ++ +A+ +      P  +++F+PH
Sbjct: 1   MQRWRGLE---AVPTGWGRSVVTIGIFDGVHRGHQKLIGRAVDLGRGLGLPTVLVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+  + + +++  +G  A     FT E +  +  +F+  +LV+ L  
Sbjct: 58  PAELVRPGSHPARLTSLARRSELVADLGVDAFCVLPFTAELSRRTPAEFVHDILVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG    GD  +L + G ++GF       L +     +SS+ +R  +  G 
Sbjct: 118 AVVVVGDNFTFGYRAEGDVTMLAELGRRFGFSVEGYG-LVSEADVTLSSTFVRACIDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V  AA +LG    I+  V+HG++ GR LG+PTAN+   P   L  +GVYA RF    +  
Sbjct: 177 VETAAAVLGRPHRIDGVVVHGDQRGRDLGYPTANVAAPPYTALPADGVYAGRFLHAGRA- 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
                + G NPT        +E+++ D  ++ YG   +V F   LR   KF  IE L   
Sbjct: 236 LPAAISVGTNPTF-SGRERTVEAYVLDVEEDFYGHEVSVEFVHRLRGMEKFDSIEALVEQ 294

Query: 298 MGEDEKKARKILE 310
           MG D ++ R++L 
Sbjct: 295 MGRDVEQTRELLS 307


>gi|309973535|gb|ADO96736.1| Putative riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R2846]
          Length = 312

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGENAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          ++ Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLDE-QRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 300 EKDVETAKAFFNS 312


>gi|256822882|ref|YP_003146845.1| riboflavin biosynthesis protein RibF [Kangiella koreensis DSM
           16069]
 gi|256796421|gb|ACV27077.1| riboflavin biosynthesis protein RibF [Kangiella koreensis DSM
           16069]
          Length = 313

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 8/316 (2%)

Query: 1   MHVFHNIEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M +   +    S P +L  +G V  IGNFDG+HLGH  I+++    A     P  V+ F 
Sbjct: 1   MRLIRGL---YSCPPNLFAQGSVATIGNFDGVHLGHQAIIKRLTVKAEALSVPSVVIVFE 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+   +  +    L   + +   L+ +G   ++  +F  E A  SAE FI++VLVE L
Sbjct: 58  PHPQEFFRPDAAPARLFKLTDKLLALKDLGVDYVLCLRFNQELAELSAEDFIRRVLVETL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            VK +  G  F+FG  R GD  +L + G         + +  +     +SSS +R A+  
Sbjct: 118 RVKHLFIGDDFKFGYQRQGDFALLNQAGHFPVEANQTVVQEVDGGDVRISSSLVRQAIAD 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
                   LLG  +     V HG+K GRT+G PTAN+ L       +GVYA++       
Sbjct: 178 SDFTRTEKLLGRPYRFSGRVAHGDKQGRTIGIPTANIALKRLKSPLQGVYAVKVLGIGNK 237

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           + +GVAN G+ PT+       LE  +FDF  ++YGQ  T+     +R E KF   ++L  
Sbjct: 238 AINGVANVGKKPTLNERKER-LEIHLFDFEGDVYGQHLTIEPITKIRDEQKFNGKDELIE 296

Query: 297 YMGEDEKKARKILESS 312
            +  D +KAR +  + 
Sbjct: 297 QINRDIEKARALFNNQ 312


>gi|145634140|ref|ZP_01789851.1| hypothetical protein CGSHiAA_08850 [Haemophilus influenzae PittAA]
 gi|148826386|ref|YP_001291139.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittEE]
 gi|229846023|ref|ZP_04466135.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 7P49H1]
 gi|145268584|gb|EDK08577.1| hypothetical protein CGSHiAA_08850 [Haemophilus influenzae PittAA]
 gi|148716546|gb|ABQ98756.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittEE]
 gi|229811027|gb|EEP46744.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 7P49H1]
          Length = 308

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGENAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          ++ Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLDE-QRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|213961797|ref|ZP_03390063.1| riboflavin biosynthesis protein RibF [Capnocytophaga sputigena
           Capno]
 gi|213955586|gb|EEB66902.1| riboflavin biosynthesis protein RibF [Capnocytophaga sputigena
           Capno]
          Length = 308

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 112/297 (37%), Positives = 172/297 (57%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  I+E+ +  A    +  TV +F PHPR ++Q    +  +   
Sbjct: 14  QPTVLTIGTFDGVHLGHQKIVERVVTTARQEGLLATVFTFFPHPRMVVQHDKGLKLIHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++++L+++G   L+   F    A  SAE+F+  +LVE L VK VI G   RFG++R  
Sbjct: 74  EEKKQLLQQLGVDLLVVQPFNEAFAQLSAEEFVSTILVEHLNVKKVIIGYDHRFGRNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   ++  G+KYGF    I  ++      VSS+ IR AL KG V  A H LG  +++   
Sbjct: 134 NIDDMRLFGKKYGFAVEEI-SVQEVDEVSVSSTKIREALNKGDVTTAEHYLGTPYSLTGR 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG K+GRTLG+PTAN+Q++ D  ++ K+GVYA+      +  Y G+ + G+NPT+   
Sbjct: 193 VVHGLKLGRTLGYPTANIQVTEDYKLIPKDGVYAVYSYIGGRKVY-GMMSIGKNPTIEGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G   +E + FDF+  +Y Q+ T+ F  YLR E KF  I+ LK  + +DE  ARK + 
Sbjct: 252 G-ASIEVYFFDFNGNLYDQKLTIEFVQYLREEQKFATIDLLKKQLQDDETAARKAIA 307


>gi|315444936|ref|YP_004077815.1| riboflavin kinase ;FMN adenylyltransferase [Mycobacterium sp.
           Spyr1]
 gi|315263239|gb|ADT99980.1| riboflavin kinase ;FMN adenylyltransferase [Mycobacterium sp.
           Spyr1]
          Length = 324

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 20/328 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      VV IG FDG+H GH  ++ +A+K   +   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVVTIGVFDGVHRGHQELIGRAVKAGRSRGVPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E+MG    +   FT +    + E+++ ++LVE L V
Sbjct: 58  PMEVVFPGSHPAQLTTLTRRAELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+  +L+K G+++GF       + E   +++   SS+ IR+ + 
Sbjct: 118 VEVVVGDNFTFGKKAAGNVELLRKAGDRFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ A   LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAEEALGRPHRVEGVVVRGDGRGRDLGFPTANVAPPMYAAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D   ++YGQ   V F   LR 
Sbjct: 238 HGPVVGTVTPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTEADLYGQHVAVDFVARLRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESS 312
           + KF  +  L   M  D ++AR IL + 
Sbjct: 297 QEKFGSVADLITAMEGDTERARTILSAQ 324


>gi|197106621|ref|YP_002131998.1| riboflavin biosynthesis protein RibF [Phenylobacterium zucineum
           HLK1]
 gi|196480041|gb|ACG79569.1| riboflavin biosynthesis protein RibF [Phenylobacterium zucineum
           HLK1]
          Length = 315

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 110/315 (34%), Positives = 158/315 (50%), Gaps = 2/315 (0%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M     I   ++LP   +G  VA+G+FDG+H GH  ++  A K A     P+ V++F+PH
Sbjct: 1   MKRIRVIRGWKTLPPADRGAAVAMGSFDGVHRGHQQVIALAAKAAGALKAPLGVITFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   +   P F L  P  Q + LE +G   L       E A  +  +F ++VL   +  
Sbjct: 61  PRVYFRPDEPAFRLMKPDQQARALEALGVDMLYVLPMDAEVAGMTDREFAEQVLHRGIGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G    FGK R G    ++  GE+ GF     D + +   +  SS+++R AL  G 
Sbjct: 121 RHVAVGFDNSFGKGRTGSPATMRVYGEEMGFGVSVADPVGDGDGRKFSSTDVRDALRDGR 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA +LG  F IE  V  G ++GR LGFPTAN+ L   +  + GVYA R R  D    
Sbjct: 181 PEIAAEILGRPFAIEGPVQRGRQLGRKLGFPTANVALDDYVTPRFGVYATRTRLPDGREV 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G NPT+      LLE ++FDF +++Y Q        +LRPE KF  +E +   +
Sbjct: 241 PGVANIGINPTVDGITRPLLEVWLFDFDEDLYDQVIETDLITFLRPEEKFPSLEVMTRQV 300

Query: 299 GEDEKKARKILESSY 313
             D K AR +L   +
Sbjct: 301 MADAKAARALLMPDF 315


>gi|116052704|ref|YP_793020.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|254244542|ref|ZP_04937864.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 2192]
 gi|296391375|ref|ZP_06880850.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PAb1]
 gi|115587925|gb|ABJ13940.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197920|gb|EAZ61983.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 2192]
          Length = 312

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G V  IGNFDG+HLGH  IL +  + +     P  V+ F P 
Sbjct: 1   MQLLRGL---HNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSLELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L+    + ++L   G   ++   F       SA +F+++VLV+ L V
Sbjct: 58  PREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR+GD   L     + GF       +       VSS+ +R AL +G 
Sbjct: 118 RHLEVGDDFRFGCDRSGDFAFLVNASREQGFTVEAAATV-ELDGVRVSSTRVRQALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++   V+HG+K+GR LG PTAN+QL        GVY +     D    
Sbjct: 177 LHLAERLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLV-STLVDGQRC 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 236 QGVANIGTRPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|229843976|ref|ZP_04464117.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 6P18H1]
 gi|229812970|gb|EEP48658.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 6P18H1]
          Length = 308

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGENAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|260581956|ref|ZP_05849752.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae NT127]
 gi|260095149|gb|EEW79041.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae NT127]
          Length = 312

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F+  +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFYHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 300 EKDVETAKAFFNS 312


>gi|146305987|ref|YP_001186452.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina ymp]
 gi|145574188|gb|ABP83720.1| FMN adenylyltransferase / riboflavin kinase [Pseudomonas mendocina
           ymp]
          Length = 316

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 105/297 (35%), Positives = 149/297 (50%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L    +G VV IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 1   MQLVRGL---HNLQPQARGCVVTIGNFDGVHRGHQAILARLRERAAELAVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    +  +L   G   ++   F       SA +F+Q+VLV+ L V
Sbjct: 58  PREFFGPDTAPARLTRLRDKLALLAAEGVDLVLCLAFNRRLRELSAAEFVQRVLVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  FRFG DRAGD   L+  G++YGF       +     + VSS+ +R AL  G 
Sbjct: 118 KDLEIGDDFRFGCDRAGDFEFLKAAGQRYGFSVDASTTVEVLGGR-VSSTRVRQALADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V+HG+K+GR L  PTAN+QL    +   GVY +     D    
Sbjct: 177 FELAEALLGRPFRIAGRVLHGQKLGRQLDAPTANIQLKRRKVPLTGVYLVSCEI-DGVIQ 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE  + DF+ ++YG+R +V+F   LR E +F  +E LK
Sbjct: 236 PGVANIGVRPSVAGDGRAHLEVHLLDFAGDLYGRRLSVAFHHKLRDEQRFASLEALK 292


>gi|220936372|ref|YP_002515271.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997682|gb|ACL74284.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 308

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 103/313 (32%), Positives = 158/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        +L    +G V  IGNFDG+HLGH  +L Q  + A     P TV+SF P 
Sbjct: 1   MELIRG---AHNLRPRHRGTVATIGNFDGLHLGHQAVLGQLAEKAAELGLPTTVISFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L     +   L +     L+  +F    A   A  F++ +L E L V
Sbjct: 58  PREYFLGDKAPPRLQRFRDKFLALRRFSVDRLLCLRFDRRLAEQEASAFVEDLLAERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG+ R+GD  +L++ G+++GFH   +   + + ++ VSS+ IR AL  G 
Sbjct: 118 KYLVVGDDFRFGRKRSGDFQLLRELGQRHGFHVARMHSFQVDGAR-VSSTRIREALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  + +   V HG+K GRT+GFPTAN+++ P  L   GVYA+     +    
Sbjct: 177 MDTAQKLLGRPYRLNGRVAHGDKRGRTIGFPTANLRMGPRPLAVRGVYAVEVFGLNGDPV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FD   ++YG+   V     +R E +F+ ++ LK  +
Sbjct: 237 RGVANVGTRPTV-GGLENRLEVHLFDVDADLYGRVLHVDLLARIREEQRFESLDALKAQI 295

Query: 299 GEDEKKARKILES 311
             D ++AR+   +
Sbjct: 296 ARDAQQARQFFGT 308


>gi|313200305|ref|YP_004038963.1| riboflavin biosynthesis protein ribf [Methylovorus sp. MP688]
 gi|312439621|gb|ADQ83727.1| riboflavin biosynthesis protein RibF [Methylovorus sp. MP688]
          Length = 302

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 16/314 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF +   +   P       +AIGNFDG+HLGH  +L Q +    A      V++F PH
Sbjct: 1   MRVFRHFPASGERP----PAALAIGNFDGVHLGHQALLRQLVQVAAARGLQPVVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + +   + G + +    F    A   A  F+Q +L   L  
Sbjct: 57  PREFFTPLQAPARLTSLREKLEHFIEAGVADVYVCHFNQRFAALEASAFMQDILRGQLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R G    L++     GF    + E++ +  + +SS+ +R AL  G 
Sbjct: 117 EAILVGDDFRFGARRQGGLDDLRQA----GFALESVPEIQLDGDR-ISSTRVRQALHDGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  ++I   V+HG K+GR LGFPTAN+ +  +     GVYA++         
Sbjct: 172 LPLASALLGRYYSISGKVVHGRKLGRQLGFPTANIHMRHERPALTGVYAVKLDG-----L 226

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+     L LE  + D+S ++Y +   VSF   LR E+KF  ++ LK  +
Sbjct: 227 PGVANLGVRPTIAGTPRLSLEVHLLDYSGDLYDRHVHVSFLKKLRDEMKFPGLDALKQQI 286

Query: 299 GEDEKKARKILESS 312
             D  +AR    S 
Sbjct: 287 ALDSAQARTFFASQ 300


>gi|254454631|ref|ZP_05068068.1| riboflavin biosynthesis protein RibF [Octadecabacter antarcticus
           238]
 gi|198269037|gb|EDY93307.1| riboflavin biosynthesis protein RibF [Octadecabacter antarcticus
           238]
          Length = 314

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 117/318 (36%), Positives = 169/318 (53%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           MH+  + +    +  + +G   AIGNFDG+HLGH  +++    +AN +P+ +L+F PHPR
Sbjct: 1   MHIIRDPDF---IAQNDRGAAAAIGNFDGVHLGHQAVIDLTRSVANGAPLGILTFEPHPR 57

Query: 61  TIIQS----SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                     +P F L   + +   LEK+G S L    F    A  + E+F Q ++V+ L
Sbjct: 58  DYFAQMSDQVAPPFRLMNAASKANRLEKLGVSRLYEVPFNDALAALTPEEFAQTIIVDRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  V+ G+ F FGKDRAG+   LQ  G   GF       L       VSS+ IR AL  
Sbjct: 118 GLTHVVVGSDFCFGKDRAGNATSLQAFGAAMGFGVTIAPMLATAAGD-VSSTAIRKALAD 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-- 234
           G    AA +LG+   I+  VI GE+ GR LG+PTANM +      K GVYA++    +  
Sbjct: 177 GSPRIAAEMLGHWHRIDGPVITGEQRGRDLGYPTANMSIDGLHPPKFGVYAVKVDVLEGP 236

Query: 235 -QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            + SY+G A+ G  P    N P   E+++FDFS ++YG + +V+  DYLR E KF  +E 
Sbjct: 237 HKGSYNGAASIGVRPMFGVNVP-NCETYLFDFSGDLYGTQLSVALVDYLRGEEKFDGLEA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M  D  +AR IL +
Sbjct: 296 LITQMDADCVRARGILSN 313


>gi|94501196|ref|ZP_01307718.1| hypothetical protein RED65_07969 [Oceanobacter sp. RED65]
 gi|94426623|gb|EAT11609.1| hypothetical protein RED65_07969 [Oceanobacter sp. RED65]
          Length = 323

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 161/297 (54%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ IGNFDG+HLGH  +L++         +   V+ F P P+           L   
Sbjct: 30  EGCVLTIGNFDGVHLGHQALLDKVKAKGEELSLQTAVMIFEPQPKEFFDPDGAPARLCNL 89

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++ ++     L    F       +AE F+Q+VL++ L VK +I G  FRFG DR+G
Sbjct: 90  AEKIQLFQRQNIDVLACMAFNPRFRQLTAEAFVQQVLIDALNVKALIVGDDFRFGCDRSG 149

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   LQ+ GE+YGF       +  + ++ VSS+ +R AL +G +L+AA LLG  ++I   
Sbjct: 150 DFAFLQEAGERYGFSVEDTQTIAQSGNR-VSSTRVRQALEEGRLLDAAELLGRPYSISGR 208

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + HG+K+GRT+G PTAN+ L  +     GV+A++     Q  + GVAN G  PT+     
Sbjct: 209 IAHGQKLGRTIGTPTANVILKREKAPLRGVFAVK-VICKQGEFKGVANIGTRPTVGGV-K 266

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             LE+ +FDFS ++YGQR  V F + +R E +F  I+ LK  + +D + A+      
Sbjct: 267 ANLEAHLFDFSGDLYGQRIDVIFCEKIRDEKRFDGIDALKAAIEQDRQLAKAYFNKQ 323


>gi|309751369|gb|ADO81353.1| Putative riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R2866]
          Length = 312

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 300 EKDVETAKAFFNS 312


>gi|15599757|ref|NP_253251.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa PAO1]
 gi|107099776|ref|ZP_01363694.1| hypothetical protein PaerPA_01000794 [Pseudomonas aeruginosa PACS2]
 gi|218893656|ref|YP_002442525.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           aeruginosa LESB58]
 gi|254238691|ref|ZP_04932014.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa C3719]
 gi|9950806|gb|AAG07949.1|AE004869_13 riboflavin kinase/FAD synthase [Pseudomonas aeruginosa PAO1]
 gi|126170622|gb|EAZ56133.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa C3719]
 gi|218773884|emb|CAW29698.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa LESB58]
          Length = 312

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G V  IGNFDG+HLGH  IL +  + +     P  V+ F P 
Sbjct: 1   MQLLRGL---HNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSLELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L+    + ++L   G   ++   F       SA +F+++VLV+ L V
Sbjct: 58  PREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR+GD   L     + GF       +       VSS+ +R AL +G 
Sbjct: 118 RHLEVGDDFRFGCDRSGDFAFLVNASREQGFTVEAATTV-ELDGVRVSSTRVRQALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++   V+HG+K+GR LG PTAN+QL        GVY +     D    
Sbjct: 177 LHLAERLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLV-STLVDGQRC 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 236 QGVANIGTRPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|325272198|ref|ZP_08138621.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           sp. TJI-51]
 gi|324102664|gb|EGC00088.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           sp. TJI-51]
          Length = 316

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 148/297 (49%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERGQALGLPTCVVVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +   A+ F++ +LV+ L V
Sbjct: 58  PREYFAPDTAPARLARLRDKLELLAAEGIDRVLCLAFNQRLSKLGADAFVKTILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L + G++YGF     + +       VSS+ +R AL  G+
Sbjct: 118 RHLEVGDDFRFGCDRAGDFAFLVEAGKQYGFTVEAANTV-IQDGLRVSSTEVRQALADGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A HLLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY       D  ++
Sbjct: 177 FELAEHLLGRPYRITGRVLHGQKLARQLGTPTANIQLKRRRVPLSGVYLASIEI-DGKAW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GV N G  PT+  +G   LE  + D++ ++YG+R TV F   LR E +F  +E LK
Sbjct: 236 PGVGNIGVRPTVAGDGRPHLEIHLLDYAGDLYGRRLTVEFHHKLREEQRFASLEALK 292


>gi|83746250|ref|ZP_00943303.1| Riboflavin kinase / FMN adenylyltransferase [Ralstonia solanacearum
           UW551]
 gi|207742566|ref|YP_002258958.1| riboflavin biosynthesis protein [Ralstonia solanacearum IPO1609]
 gi|83727000|gb|EAP74125.1| Riboflavin kinase / FMN adenylyltransferase [Ralstonia solanacearum
           UW551]
 gi|206593959|emb|CAQ60886.1| riboflavin biosynthesis protein [Ralstonia solanacearum IPO1609]
          Length = 354

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 158/313 (50%), Gaps = 5/313 (1%)

Query: 6   NIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           ++++ + LPN        + IGNFDG+H GH  +L +A   A+    P+TV++F PHPR 
Sbjct: 22  HVKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLTVMTFEPHPRE 81

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     ++    + + L + G   ++   F    A  +  +F++ VLV+ L  + +
Sbjct: 82  FFMPDRAPTRIALLRDKLESLRRQGVDRVVVEHFNAHFAAQTPTEFVRNVLVDGLHTRWL 141

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG  RAGD   LQ  G ++ F    +  + +     +SSS +R AL  G + +
Sbjct: 142 LVGDDFRFGAKRAGDFTYLQAAGAQFDFEVEQMGSV-SESGIRISSSAVREALAAGDLEH 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           A  LLG+ + I   V+HG+K+GR+LGFPT N+++S       G++ ++     +     V
Sbjct: 201 ARRLLGHGYAISGHVVHGQKLGRSLGFPTLNLRISHRKPAVSGIFIVQVHGLAEKPLPAV 260

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  PT+  +G +LLE  IFD+    Y +   V F   LR E +F  ++ LK  +  D
Sbjct: 261 ASIGVRPTVDDSGRVLLEVHIFDYHANAYSKLVRVEFMKKLRDEARFDSLDALKDAIARD 320

Query: 302 EKKARKILESSYP 314
              AR     + P
Sbjct: 321 CVDARHFFGLALP 333


>gi|313107206|ref|ZP_07793405.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 39016]
 gi|310879907|gb|EFQ38501.1| riboflavin kinase/FAD synthase [Pseudomonas aeruginosa 39016]
          Length = 312

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G V  IGNFDG+HLGH  IL +  + +     P  V+ F P 
Sbjct: 1   MQLLRGL---HNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSLELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L+    + ++L   G   ++   F       SA +F+++VLV+ L V
Sbjct: 58  PREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR+GD   L     + GF       +       VSS+ +R AL +G 
Sbjct: 118 RHLEVGDDFRFGCDRSGDFAFLVNASREQGFTVEAAATV-ELDGVRVSSTRVRQALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++   V+HG+K+GR LG PTAN+QL        GVY +     D    
Sbjct: 177 LHLAGRLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLV-STLVDGQRC 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE  + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 236 QGVANIGTRPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|145628099|ref|ZP_01783900.1| hypothetical protein CGSHi22121_03640 [Haemophilus influenzae
           22.1-21]
 gi|145638214|ref|ZP_01793824.1| hypothetical protein CGSHiII_05569 [Haemophilus influenzae PittII]
 gi|144979874|gb|EDJ89533.1| hypothetical protein CGSHi22121_03640 [Haemophilus influenzae
           22.1-21]
 gi|145272543|gb|EDK12450.1| hypothetical protein CGSHiII_05569 [Haemophilus influenzae PittII]
          Length = 308

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|209525276|ref|ZP_03273818.1| riboflavin biosynthesis protein RibF [Arthrospira maxima CS-328]
 gi|209494291|gb|EDZ94604.1| riboflavin biosynthesis protein RibF [Arthrospira maxima CS-328]
          Length = 339

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 165/341 (48%), Gaps = 30/341 (8%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-------------------- 46
           + I  S    L    VA+GNFDG H GH  ++   +                        
Sbjct: 1   MWITSSKDTVLTPTAVALGNFDGFHRGHQQVVRPILNPNQVAVDSQKVGGGYSETTPPFG 60

Query: 47  -NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
            +   TV++FNPHP+      +    L+P   + +IL + G   L+   F  + A+ +  
Sbjct: 61  ISGYGTVVTFNPHPQEFFTGQTK-KLLTPLPEKIEILRRFGVQQLVLLPFDKDLASLTPT 119

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV 165
           QF++++LVE+L+   V  G  FRFG+ R G    L+    +YG     +          +
Sbjct: 120 QFVEQILVEYLQATRVSVGFDFRFGRHRMGSTDDLKAIASQYGIDVEIVSRFPCPYGDRI 179

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEG 224
           SSS IR +LT+GH+  A  LLG  +T+  +V+ G+++GRTLGFPTAN+QL P+  L + G
Sbjct: 180 SSSIIRESLTEGHLNRANQLLGRAYTLLGEVVQGQQLGRTLGFPTANLQLPPEKFLPRYG 239

Query: 225 VYAIRFRTQDQT------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
           VYA+                 GV N G  PT+  + P  +E  + D+  ++YGQ  TVS 
Sbjct: 240 VYAVLVTGLAARYGKTIAPQLGVMNIGCRPTVAGDNP-TVEVHLLDWDGDLYGQSLTVSL 298

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
             +LRPE KF  +E+LK  +  D   AR  L++   L   D
Sbjct: 299 EGFLRPEQKFASLEQLKAQIQRDCTHARTYLQARKNLPLLD 339


>gi|317152589|ref|YP_004120637.1| riboflavin biosynthesis protein RibF [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942840|gb|ADU61891.1| riboflavin biosynthesis protein RibF [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 332

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +  NIE    +   + G  V IGNFDG+H GH  ++E A     A      V++F+PH
Sbjct: 1   MIIVKNIE---DIRGAIAGSCVTIGNFDGVHKGHQKLIELATSRAKAQGLVSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  ++    ++    + +++ + G    +  +FTLE A  S E+F++K LV+ + +
Sbjct: 58  PLQVLGKAAAPPFITLTEQKLELISQHGPQVCLLLEFTLEMARLSPEEFVRKYLVDGVHM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  +  GK R+G+   L + G   GF    +D +  + +  VSS+ IR  +  G 
Sbjct: 118 QEMIIGYDYHLGKGRSGNFETLSELGAACGFAVDRLDPVTIDGAV-VSSTRIRDLVQSGR 176

Query: 179 VLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  + ++  V+H   + GR LGFPTAN++L  ++    GVYAI      +  
Sbjct: 177 VWAARPLLGRFYQVKGRVVHGMNRGGRLLGFPTANLKLVDELFPMPGVYAIWVEVPGEVR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G NPT   N  L +E+ I D+S ++YG    V F   +R E KF  +++L+  
Sbjct: 237 M-GVANIGINPTF-GNDALSVEAHILDYSGDLYGADIRVHFVQRIRDERKFSGLDELRAR 294

Query: 298 MGEDEKKARKILES 311
           + +D +  R+IL  
Sbjct: 295 ITKDVELGRQILSQ 308


>gi|206891050|ref|YP_002248546.1| riboflavin biosynthesis protein RibF [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742988|gb|ACI22045.1| riboflavin biosynthesis protein RibF [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 317

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 114/317 (35%), Positives = 172/317 (54%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   IE  ++     K  V+ IGNFDG+H+GH  I +   + A+  N    V++F+PH
Sbjct: 1   MQVIRGIEKLEA-----KNTVITIGNFDGVHIGHQKIFDYLKRKASQINGKSVVITFHPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++    P+  ++    + K++EK G    I   FT E A   AE F++ +LVE L  
Sbjct: 56  PIKVLFKEHPLRLITTTDDKLKLIEKCGVDITILIPFTREFAQIEAEDFVKDILVEKLNA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  +RFG+ R GDR +L+K G  YGF    +   ++ K +I+SS+ +R AL  G+
Sbjct: 116 KWVVVGYDYRFGRGRKGDRYLLKKLGLFYGFKVTVLKAYKS-KGKILSSTAVRNALNDGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQD-QT 236
           +  A   LG  + I+ DVI G   G T LG+PTAN+    +I+ KEGVYA++        
Sbjct: 175 IKEANLFLGRAYHIDGDVIKGLGRGSTVLGYPTANIAPIQEIIPKEGVYAVKVTIPHLSK 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           ++ GVAN G+NPT   N  +  E  IFDF + + G+   V F   LR E KF   ++LK 
Sbjct: 235 TFKGVANIGKNPTFN-NVNMSYEVHIFDFKENLLGKTIRVHFIARLRDEKKFNSPDELKK 293

Query: 297 YMGEDEKKARKILESSY 313
            +  D + A+K+ +   
Sbjct: 294 NIAHDIEMAKKVFKQDR 310


>gi|89093565|ref|ZP_01166513.1| hypothetical protein MED92_18273 [Oceanospirillum sp. MED92]
 gi|89082255|gb|EAR61479.1| hypothetical protein MED92_18273 [Oceanospirillum sp. MED92]
          Length = 310

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 106/314 (33%), Positives = 166/314 (52%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+HLGH  +L Q    A     P  V++F P 
Sbjct: 1   MELIRGL---HNLREKHRGCVATIGNFDGVHLGHRQVLAQVKAKAQELGLPSVVITFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+  S + ++L+  G    +   F     + +AEQF++++L+  L V
Sbjct: 58  PREFFAGDKAPPRLTRFSEKYRLLQAEGMDRHLCLTFNERLRSMTAEQFVEELLLRGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +  + G  FRFG DR+GD  +L + GE++GF  V  +   + + + VSS+ +R  L    
Sbjct: 118 EHFVVGDDFRFGCDRSGDYEMLSQAGERHGFTVVNTETFLSEEER-VSSTRLRHVLEAND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG  +T+   V+HG+K+GR LG PTAN+++        GVYA+    Q   + 
Sbjct: 177 LATAAALLGRPYTVSGRVMHGQKLGRQLGVPTANVRMHRFPCPLRGVYAVEVTGQTLKA- 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G  PT+    P +LE+ +FDF ++IYGQ  TV F  ++R E KF  I++LK  +
Sbjct: 236 QGVCNVGLRPTVCGQQP-VLETHLFDFDKDIYGQLLTVEFKQFIREERKFDGIDQLKEQI 294

Query: 299 GEDEKKARKILESS 312
            +D ++ R     +
Sbjct: 295 FKDIEEVRDYFSRT 308


>gi|165975503|ref|YP_001651096.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875604|gb|ABY68652.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 320

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 117/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG VV+IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGLYNLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI ++
Sbjct: 61  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISEL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L+V+ +  G  FRFG +R GD  +L+  G KY F       L ++  Q VSSS IR
Sbjct: 121 LVKQLQVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-SHAEQRVSSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL    ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 180 TALQLDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 240 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 297

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 298 EALKAQIEKDREQAVEFFK 316


>gi|307331632|ref|ZP_07610740.1| riboflavin biosynthesis protein RibF [Streptomyces violaceusniger
           Tu 4113]
 gi|306882707|gb|EFN13785.1| riboflavin biosynthesis protein RibF [Streptomyces violaceusniger
           Tu 4113]
          Length = 318

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  +   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHQRRAELMAGLGVDAVLVLPFTTEFSRLTPADFVAKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AG+   L++ G  Y +    ID          +  SS+ +R  + 
Sbjct: 118 RVVVEGPNFRFGHKAAGNVAFLRELGTTYDYEVEVIDLYERGEAGGGEPFSSTLVRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     + 
Sbjct: 178 EGDVAGAMEVLGRPHRVEGVVVRGAQRGRELGFPTANLETPPHTAIPADGVYAGWLTARG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  YLR + KF  IE 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAYLRGQEKFDSIEA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M  D K+AR+++E 
Sbjct: 296 LLERMAADVKRARELVEE 313


>gi|224369790|ref|YP_002603954.1| RibF [Desulfobacterium autotrophicum HRM2]
 gi|223692507|gb|ACN15790.1| RibF [Desulfobacterium autotrophicum HRM2]
          Length = 309

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 96/315 (30%), Positives = 166/315 (52%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +  +++    +       V+ IGNFDG+H GH  I  Q I+ A        V++F+PH
Sbjct: 1   MELIEDLKF---IKTPFNKAVITIGNFDGVHKGHQAIFHQVIEKAEEIGGTSVVMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  + P   ++    + +++   G   ++   FT E A  SA++FI+ +L+  L +
Sbjct: 58  PLKVLGHNGPP-LITRKDQKIELISATGIDKILCLPFTREFAAISAQEFIKDLLINQLGM 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN--NKSQIVSSSNIRTALTK 176
           K ++ G  + FG++R G+  ++QK G++ GF  +  D + +    S+ +SS+ IR  + +
Sbjct: 117 KAIVVGLDYSFGRNREGNLELMQKAGKQLGFEVLIADWINDTETGSERISSTRIRELVME 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           G V      LG  + I   V+ G +  G  LGFPTAN++L  ++  K GVYA+   TQ  
Sbjct: 177 GRVDETPKFLGRFYQIRGKVVKGRQRGGSKLGFPTANIKLHDELSPKMGVYAVTVETQ-T 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + GVAN G +PT   +    +E  + DF+ ++Y  R  ++    LR E KF ++E+L 
Sbjct: 236 GKFKGVANIGYSPTF-DDHIFTIEVHLLDFAGDLYNTRIRINMIKRLRDEKKFSNLEELS 294

Query: 296 IYMGEDEKKARKILE 310
             +  D + AR+IL 
Sbjct: 295 NQIRNDIQLAREILA 309


>gi|257055500|ref|YP_003133332.1| FMN adenylyltransferase /riboflavin kinase [Saccharomonospora
           viridis DSM 43017]
 gi|256585372|gb|ACU96505.1| FMN adenylyltransferase /riboflavin kinase [Saccharomonospora
           viridis DSM 43017]
          Length = 313

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 13/311 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSP 68
             LP      VV IG FDG+H GH  ++ Q ++       P  VL+F+PHP  +++  S 
Sbjct: 2   ADLPGDWGRCVVTIGVFDGVHKGHQALISQTVRTARQRGLPSVVLTFDPHPAEVLRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + +++E++G   L    FT E +  S E+F+ ++LVE L   TVI G  FR
Sbjct: 62  PAQLTTLTRKAELIEQLGVDVLAVLPFTPELSRLSPEEFVHEILVERLHAATVIVGENFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGF-------HTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           FG    G    L++ G+++GF           + E   +     SS+ +R+ +  G V+ 
Sbjct: 122 FGYKARGTVETLRELGKRFGFTAHEATLEGHSVSENGGSAEITYSSTYVRSCINAGDVVA 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFR--TQDQTSY 238
           AA  LG    +E  V+ GE  GR LGFPTAN+ L     +  +GVYA  F    +D+   
Sbjct: 182 AAEALGRPHRLEGIVVRGEGRGRELGFPTANLSLPAFSAVPADGVYACWFVRQGRDEEPL 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
               + G NPT        +E+F+ DF  ++YGQ+  + F   LR +I F   E+L  ++
Sbjct: 242 PAAVSVGTNPTF-SGRERTVEAFVLDFDADLYGQQVALDFVARLRGQIAFDTTEELVRHI 300

Query: 299 GEDEKKARKIL 309
            +D  + R+IL
Sbjct: 301 ADDVARTRQIL 311


>gi|83589902|ref|YP_429911.1| riboflavin kinase / FMN adenylyltransferase [Moorella thermoacetica
           ATCC 39073]
 gi|83572816|gb|ABC19368.1| riboflavin kinase / FMN adenylyltransferase [Moorella thermoacetica
           ATCC 39073]
          Length = 320

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 12/325 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+  +   +++     G  +A+GNFDG+H GH  ++   ++ +        V++F PH
Sbjct: 1   MQVWQGLPAERAMN----GCNLALGNFDGVHRGHQHLIGSVVQKSRSGGGEGVVITFVPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  SP   L+    + +++ ++G   L    FT   A    E F++++L      
Sbjct: 57  PARVLEG-SPPGLLTTTKRKIELIGQLGIDHLFLLPFTPSLAALEPEAFVREILWAHFHP 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  F FG   AG   +L++ GE+ GF    +  +   +   VSS+ IR AL  G 
Sbjct: 116 SLVAVGFNFTFGHRGAGTPALLRRLGEELGFKVEVMGPV-TLRGLTVSSTAIRNALENGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +  A  LLGY   +   V+ G++ GR LGFPTAN+ + P++ L   GVYA     + +  
Sbjct: 175 IGLARDLLGYWPVLAGRVVAGDQRGRQLGFPTANLAVPPELKLPAYGVYACLASFRGRK- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  V N GR PT     P  +E+ + DFS  +Y +   + F  +LR E KF    +LK  
Sbjct: 234 WQAVVNIGRRPTFGSALPATIEAHLLDFSGNLYNEEMELEFRAFLRQERKFASPGELKAQ 293

Query: 298 MGEDEKKARKILESSY--PLSERDR 320
           M  D ++AR IL       L +RDR
Sbjct: 294 MEADREQARNILGGHRFSILEQRDR 318


>gi|49085302|gb|AAT51267.1| PA4561 [synthetic construct]
          Length = 313

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 100/297 (33%), Positives = 147/297 (49%), Gaps = 7/297 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L     G V  IGNFDG+HLGH  IL +  + +     P  V+ F P 
Sbjct: 1   MQLLRGL---HNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSLELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    L+    + ++L   G   ++   F       SA +F+++VLV+ L V
Sbjct: 58  PREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR+GD   L   G + GF       +       VSS+ +R AL +G 
Sbjct: 118 RHLEVGDDFRFGCDRSGDFAFLVNAGREQGFTVEAATTV-ELDGVRVSSTRVRQALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++   V+HG+K+GR LG PTAN+QL        GVY +     D    
Sbjct: 177 LHLAERLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKAPLNGVYLV-STLVDGQRC 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  P++  +G   LE+ + DF+ ++YG+   V+F   LR E +F  +E LK
Sbjct: 236 QGVANIGTRPSVNGDGRPHLEAHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEALK 292


>gi|260576478|ref|ZP_05844468.1| riboflavin biosynthesis protein RibF [Rhodobacter sp. SW2]
 gi|259021361|gb|EEW24667.1| riboflavin biosynthesis protein RibF [Rhodobacter sp. SW2]
          Length = 307

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 171/314 (54%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +  +    Q L    +G  VA+GNFDG+HLGH  +++ A      +P+ +++F PHPR
Sbjct: 1   MRIHQHW---QGLAQADRGASVAMGNFDGVHLGHRSVIDLARGA---APLGIVTFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +P F L     +   L K+G   L +  F    A ++ E F   VL + L V  
Sbjct: 55  EFFAPDAPAFRLMNAEARANRLAKLGVQQLYQLPFDAVMAAFTPEGFAHDVLAQGLGVSH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FGK RAG    LQ  G+K+GF     D +  + ++ VSSS IR AL++G   
Sbjct: 115 VVVGRDFCFGKGRAGTAADLQAHGDKHGFSVTIADLITLDGAE-VSSSAIRAALSEGRPR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   I+ +VIHG K GR LGFPTANM ++   L + GVYA++          S
Sbjct: 174 DAAAMLGHWHRIDGEVIHGAKRGRELGFPTANMSVNGLHLPRIGVYAVKVDVLTGPLAGS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G A+ G  P    N P  LE+++FDF  +IYGQ  +V+F DYLRPE+KF  +  L   
Sbjct: 234 YNGAASLGVRPMFGENQP-NLETYLFDFDGDIYGQHLSVAFVDYLRPEMKFDGLPALITQ 292

Query: 298 MGEDEKKARKILES 311
           M  D  +AR IL  
Sbjct: 293 MTADCHRARAILAD 306


>gi|329122985|ref|ZP_08251556.1| riboflavin biosynthesis protein RibF [Haemophilus aegyptius ATCC
           11116]
 gi|327471916|gb|EGF17356.1| riboflavin biosynthesis protein RibF [Haemophilus aegyptius ATCC
           11116]
          Length = 312

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+  L S
Sbjct: 300 EKDVETAKAFLNS 312


>gi|307249244|ref|ZP_07531241.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307262627|ref|ZP_07544257.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306858768|gb|EFM90827.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306872050|gb|EFN03764.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 341

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 117/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG VV+IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI ++
Sbjct: 82  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISEL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L+V+ +  G  FRFG +R GD  +L+  G KY F       L ++  Q VSSS IR
Sbjct: 142 LVKQLQVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-SHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL    ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 201 TALQLDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|148264727|ref|YP_001231433.1| riboflavin biosynthesis protein RibF [Geobacter uraniireducens Rf4]
 gi|146398227|gb|ABQ26860.1| riboflavin kinase / FMN adenylyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 320

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 106/324 (32%), Positives = 175/324 (54%), Gaps = 8/324 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +F N+     +   L   VV IGNFDG+HLGH  I  +  ++A        V++F PH
Sbjct: 1   MIIFKNL---SDISEKLPNAVVTIGNFDGVHLGHREIFRRVKQLAAELGGVSVVVTFVPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++  + +E ++E  G   LI   F  + A  +A +F+  VLVE + V
Sbjct: 58  PLKVLAPEKSPLLINTYAEKETLIEASGIDYLIEIPFDEKFAAITAREFVGTVLVEKIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  + FG++R GD  +L++ GE+  F    ++ + +N   I SSS IRT +  G 
Sbjct: 118 NKLVIGYDYAFGRNREGDVALLRQLGEELSFKVEVLEPI-SNGRTIFSSSLIRTMMMNGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     LLG  F++   V+HG   G+ LGFPTAN++   ++L K+GVYA++ +  D   Y
Sbjct: 177 VKGVVSLLGRHFSLGGTVVHGHHRGKGLGFPTANIETDKELLPKDGVYAVKVKIDD-VLY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT   +  L +E F+FDF  ++YG+   + F D +R E+ F D+  L+  +
Sbjct: 236 DGACNIGSNPTF-KDERLAIEVFLFDFEGDLYGKDARLYFIDRIRGELTFPDVPSLQKAI 294

Query: 299 GEDEKKARKILESSYPLSERDRII 322
            +D ++ R+IL  +  +  R+ ++
Sbjct: 295 AKDIERCREILRDAAIIEYREYLV 318


>gi|218886854|ref|YP_002436175.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757808|gb|ACL08707.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 314

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 10/315 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNP 57
           M +   + EI+  L    +G  V +GNFDG+H GH  ++ +  A   A   P  V++F P
Sbjct: 1   MEIARELQEISLDLS---RGSCVTVGNFDGVHNGHRKLIGRVMAKAAALGVPSVVVTFCP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        ++    +  + E +G    +  +FT E A    E+F+++VLV+ L 
Sbjct: 58  HPLRVLVGPHTPPLITDYEKKLDLFEALGVDLTLMLRFTREMAAQEPEEFVRRVLVDALH 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F  GK R G+  +LQ+ G++YGF T  +D +  N +  VSS+ IR  +  G
Sbjct: 118 TRELVIGYDFSLGKGRKGNFELLQRLGKQYGFATEQLDPVIINDAV-VSSTRIRDLIRAG 176

Query: 178 HVLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            V +   L+   + I   V+   ++ G+ LGFPTANM+   +++ K GVYA      D  
Sbjct: 177 DVWDVRPLMDRFYAIRGKVVRGMDRGGKLLGFPTANMEPRDELMPKPGVYATWVLI-DGQ 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N  L +E+ I DF ++IYG    VSF   LR E KF  +++L  
Sbjct: 236 VYQGVTNVGFNPTF-DNARLSVETHILDFDRDIYGWEIRVSFVHRLRDERKFSGLDELVT 294

Query: 297 YMGEDEKKARKILES 311
            +  D   AR+IL +
Sbjct: 295 QIRRDVDLARQILSA 309


>gi|319775101|ref|YP_004137589.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3047]
 gi|317449692|emb|CBY85899.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3047]
          Length = 308

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+  L S
Sbjct: 296 EKDVETAKAFLNS 308


>gi|323701870|ref|ZP_08113540.1| riboflavin biosynthesis protein RibF [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533174|gb|EGB23043.1| riboflavin biosynthesis protein RibF [Desulfotomaculum nigrificans
           DSM 574]
          Length = 313

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 105/310 (33%), Positives = 158/310 (50%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF ++     L +      VA+GNFDGIHLGH  ++ +A+  A   N    VL+F+PH
Sbjct: 1   MRVFESL---TGLKDRYPNITVALGNFDGIHLGHQRLIHEAMDNARRTNGMAAVLTFHPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L   + +E+++ ++G   L+   F    A  S  +FI+++L   L V
Sbjct: 58  PLQVLRPEMAPPMLLSRTAKEQMMAELGIDLLLMLPFNATFAQLSPIEFIEQILWNQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FG    G    L +  +KYG+    I  ++   ++IVSS+ IR  L +G 
Sbjct: 118 KGIVVGYNYTFGHKGRGTPDTLWQYSDKYGYTLHVIPPVKV-GNEIVSSTLIRKKLAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V+ A   LGY    E  V+ G++ G TLGFPTAN+   P I +  +GVY++         
Sbjct: 177 VVAARKYLGYYPFTEGVVVVGDRRGNTLGFPTANIDCPPGIVVPAKGVYSVYVELAG-EK 235

Query: 238 YSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GVAN G  PT   N     +E  + DF  +IYGQR  V +   LR E KF  I +L  
Sbjct: 236 YLGVANVGTKPTFNGNSQRTNIEVHLLDFCGDIYGQRIRVYYSRKLRDEKKFSSIMELVN 295

Query: 297 YMGEDEKKAR 306
            +  D + AR
Sbjct: 296 QIRADVQSAR 305


>gi|121998616|ref|YP_001003403.1| riboflavin biosynthesis protein RibF [Halorhodospira halophila SL1]
 gi|121590021|gb|ABM62601.1| riboflavin biosynthesis protein RibF [Halorhodospira halophila SL1]
          Length = 311

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 92/316 (29%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    ++    +G  + IGNFDG+H GH  ++++  +       P  V++F PH
Sbjct: 1   MELIRGL---HNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   +  +     L+    + + L + G  A++  +F    A   AE F  ++L   L  
Sbjct: 58  PMERLAPARAPARLTGLREKVRRLGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG+ R GD  +L++ GE +G+    ++ +     + VSS+ IR A+  G 
Sbjct: 118 GFVLVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETV-TRSGERVSSTRIREAVRAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG+ + I+  V+HG+ +GR LG+PTAN++LSP+ +  +G+YA   R   +  +
Sbjct: 177 FAEAAELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPW 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
               + G  PT+      + E+ + DF  ++YG+   V     LR E  F  ++ L   +
Sbjct: 237 PTAISVGIRPTV-GGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQI 295

Query: 299 GEDEKKARKILESSYP 314
           GED + AR++L   + 
Sbjct: 296 GEDVRAARRVLGQEHH 311


>gi|85858638|ref|YP_460840.1| riboflavin kinase / FMN adenylyltransferase [Syntrophus
           aciditrophicus SB]
 gi|85721729|gb|ABC76672.1| riboflavin kinase / FMN adenylyltransferase [Syntrophus
           aciditrophicus SB]
          Length = 326

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 165/313 (52%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +    +    + +  KG V  IGNFDG+HLGH  I  + ++ A    S   V++F+PH
Sbjct: 1   MKILRGYK---GVSDEFKGAVATIGNFDGVHLGHQQIFRKIVQEARQCQSKSVVITFDPH 57

Query: 59  PRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P++++      F L +    + K+++ +    ++   F+LE +  +A  F+ ++L E L 
Sbjct: 58  PKSVLHPEKRPFYLLTTLDEKLKLIKSLEIDGVMLIPFSLEFSKTTATDFVCRILWEQLR 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K +  G  + FG+ + G+   L + G+K GF     + ++     I+SS+ IR A+  G
Sbjct: 118 IKKIFIGHDYTFGRGKEGNEEFLARYGKKLGFRVDVTNAVKVGD-IIISSTRIRNAICDG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  A  LLG  + ++  V  G K G  LGFPTAN+     +L +EGVYA+         
Sbjct: 177 DVRLAGSLLGRPYNLKGSVAGGYKRGTQLGFPTANLDPEKLLLPREGVYAVVVELNG-KR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N GRNPT   N  L +E  I DFS +IYG++  + F D +R EI+F + E L   
Sbjct: 236 YQGVLNIGRNPTF-GNENLTVELHILDFSDDIYGEKLELFFIDRIREEIRFDNPESLADQ 294

Query: 298 MGEDEKKARKILE 310
           +  D  +AR +LE
Sbjct: 295 IRSDVAQARTVLE 307


>gi|298530228|ref|ZP_07017630.1| riboflavin biosynthesis protein RibF [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509602|gb|EFI33506.1| riboflavin biosynthesis protein RibF [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 313

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 100/302 (33%), Positives = 165/302 (54%), Gaps = 6/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPI 69
           +L + ++G  + IGNFDG+H+GH  +++Q  K      ++  V++F+PHP  ++      
Sbjct: 8   ALTDKIEGSALTIGNFDGVHVGHQQLIQQVRKRGRRMGLSSIVVTFDPHPLRVLVGKKTP 67

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    + ++++++G   ++   F  + A+   E F+   LV+ L ++ +I G  + F
Sbjct: 68  PFITLNQHKLELMQELGVDYILCMTFNKDIASMEPEDFVYDFLVKKLRLRELIVGYDYVF 127

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK+R G+  +LQ+ G+KYGF       +  + + IVSS+ IR  +  G V     LLG  
Sbjct: 128 GKNRRGNFHLLQQLGQKYGFSVDQFMPVMVDGA-IVSSTRIRDLVESGRVWEVHPLLGRF 186

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +++E  V  G + G + LGFPTAN+ L  ++    GVYA+         ++ VAN G NP
Sbjct: 187 YSVEGRVTTGRQRGGSLLGFPTANILLQDELFPSTGVYAVWAEISGSI-HAAVANIGYNP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   N  L +E  IFDF Q++Y  +  V F   LR E KF  IE+LK  +  D K AR+I
Sbjct: 246 TF-GNDYLSVEVHIFDFHQDVYNHKVKVHFVQRLRSEKKFAGIEELKSQITLDCKLAREI 304

Query: 309 LE 310
           L+
Sbjct: 305 LK 306


>gi|326386296|ref|ZP_08207920.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209521|gb|EGD60314.1| riboflavin kinase / FMN adenylyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 308

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 109/307 (35%), Positives = 170/307 (55%), Gaps = 4/307 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
             +    LP+  +G ++A+GNFDG HLGH  +   A++ A     P  + +F+PHP    
Sbjct: 2   RFDARHPLPDAFRGAIIALGNFDGFHLGHQAVAGAAVEWARAEGRPAIIATFDPHPVRHF 61

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           Q  +  F L+    +E++    G  A++ + F  + AN +A +F+  +LV  L    V+T
Sbjct: 62  QPDTAPFRLTTLDQREELFLAAGADAMLIFHFDHDLANTTAAEFVCDLLVGRLGAAGVVT 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FGK R G+ G+L + G + G  T  +  +     ++VSSS IR AL +G  + A 
Sbjct: 122 GDDFTFGKGRGGNVGVLTELGRELGLRTRQVGPVLV-GGEVVSSSRIREALEEGDCVTAG 180

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            L+   + I   V HG+K+GRT+GFPTAN+ +   +  + G+YA+  R  D T   G AN
Sbjct: 181 RLMTRPYAIRGIVQHGDKVGRTIGFPTANLVIRNYLRPRYGIYAVTGRLADGTRLKGAAN 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT  P    LLE   FDFS ++YGQ   V+F  +LR E KF  ++ + + +G+D +
Sbjct: 241 MGVRPTFNPPKE-LLEPHFFDFSGDLYGQEIEVAFHYFLRGEWKFDSLDAMMVQIGKDCE 299

Query: 304 KARKILE 310
           +AR++LE
Sbjct: 300 EARRLLE 306


>gi|74317874|ref|YP_315614.1| FMN adenylyltransferase / riboflavin kinase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057369|gb|AAZ97809.1| riboflavin kinase [Thiobacillus denitrificans ATCC 25259]
          Length = 309

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 161/316 (50%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M + H                V IGNFDG+HLGH  +L   QA+  A      VLSF PH
Sbjct: 1   MRITHGFR------PLGTAHAVTIGNFDGLHLGHQAMLARLQAVARARGLSSCVLSFEPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           LS    + + L+++G      ++F    ++ SAE FI++VL   L+ 
Sbjct: 55  PREFFAPEQAPARLSSLREKAECLQRLGVDRFHVFRFDRPFSSLSAEAFIEQVLGHTLQA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD  +LQ+ G   GF    +  +     +  SS+ +R AL  G 
Sbjct: 115 RYVLVGDDFRYGAKRAGDFALLQQAGAHLGFDAEHLPTVEI-AGERASSTAVRQALAAGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A  LLG  ++I   V+HG+K+GR +GFPTAN+QL  +     G+YA+     +    
Sbjct: 174 LHHAGCLLGRPYSISGRVVHGDKLGRAIGFPTANIQLRHNRPPLMGIYAVELCGLNGAPL 233

Query: 239 SGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVA+ GR PT+   +   +LE  +FDF  +IYG+R  V F   LR E ++ D++ L   
Sbjct: 234 QGVASLGRRPTVKGADAVPVLEVHLFDFDADIYGRRVRVDFLHKLRDEERYPDLDSLVAQ 293

Query: 298 MGEDEKKARKILESSY 313
           +  D + AR+ L  + 
Sbjct: 294 IRRDVEDARQFLAKTR 309


>gi|186475342|ref|YP_001856812.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia phymatum STM815]
 gi|184191801|gb|ACC69766.1| riboflavin biosynthesis protein RibF [Burkholderia phymatum STM815]
          Length = 330

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+  + P+ V++F PH
Sbjct: 1   MRVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARSLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++++V  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRMNGVDRVVVEHFNHTFASQSPDAFVERIIVNGLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FR+G  RAGD   L+  G +YGF    +  + +     +SSS +RT+L  G 
Sbjct: 117 RWVMIGDDFRYGAKRAGDFNSLKTAGAEYGFEVEQMATVADPSGARISSSGVRTSLIAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A   LG  + I   V+HG K+GR LGFPT N+ ++       G++ ++    D    
Sbjct: 177 LDSARAALGRDYLISGHVVHGLKLGRDLGFPTLNLPIAHKRPALSGIFIVQVHGIDDKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEEKFVDLETLTAAI 296

Query: 299 GEDEKKARKILES 311
             D + AR   E+
Sbjct: 297 ARDVENARAWFEA 309


>gi|68249551|ref|YP_248663.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 86-028NP]
 gi|68057750|gb|AAX88003.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae
           86-028NP]
          Length = 312

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGENAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 300 EKDVETAKAFFNS 312


>gi|291614549|ref|YP_003524706.1| riboflavin biosynthesis protein RibF [Sideroxydans lithotrophicus
           ES-1]
 gi|291584661|gb|ADE12319.1| riboflavin biosynthesis protein RibF [Sideroxydans lithotrophicus
           ES-1]
          Length = 308

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 94/311 (30%), Positives = 154/311 (49%), Gaps = 9/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +   +       +  +   V IGNFDG+HLGH  +L   +A   A      V+ F PH
Sbjct: 1   MQILRGLHS-----SGTQAVAVTIGNFDGVHLGHQALLGELRAAAQARGLQTAVVIFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++   MG   +   +F +  A  +A+ FI  +  + L  
Sbjct: 56  PREFFTPQQAPARLTSLREKLELFRTMGVDRVHVCRFDVLFAKQTADDFIHALY-DSLHA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG  RAGD  ++QK G + GF    +  +  +    +SS+ IR AL  G 
Sbjct: 115 RFVLIGDDFRFGSGRAGDFALMQKIGAQRGFEVAAVHSVL-HDGVRISSTAIREALAAGQ 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG  ++I   V+HG+ +GR LG+PTAN+QL  ++   +G+Y +    +     
Sbjct: 174 IRMARDYLGRPYSISGRVVHGDGMGRKLGYPTANIQLKHNLPPLKGIYVVLAHAEGLGVL 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV++ G  PT+  +   +LE  +F+F+Q+IYG+   V F   LR E K+ ++E L   +
Sbjct: 234 QGVSSLGVRPTLKQDAKPVLEVHLFEFAQQIYGKHLRVEFLQKLRNEEKYPNLEALTRQI 293

Query: 299 GEDEKKARKIL 309
             D + A++  
Sbjct: 294 ALDVEHAKQWF 304


>gi|190149314|ref|YP_001967839.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914445|gb|ACE60697.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 320

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 116/319 (36%), Positives = 172/319 (53%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG VV+IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGLYNLANHKDLAKGSVVSIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI ++
Sbjct: 61  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISEL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L+V+ +  G  FRFG +R GD  +L+  G KY F       L ++  Q VSSS IR
Sbjct: 121 LVKQLQVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-SHAEQRVSSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            AL    ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 180 MALQLDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 240 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 297

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 298 EALKAQIEKDREQAVEFFK 316


>gi|149200970|ref|ZP_01877945.1| riboflavin biosynthesis protein RibF [Roseovarius sp. TM1035]
 gi|149145303|gb|EDM33329.1| riboflavin biosynthesis protein RibF [Roseovarius sp. TM1035]
          Length = 312

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 114/316 (36%), Positives = 164/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +      + +  +G  VAIGNFDG+H+GH  ++E A        +P+ +L+F PH
Sbjct: 1   MRIIRDYTY---VTDADRGASVAIGNFDGVHIGHRSVIELARAAGERIGAPLGILTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     +   LEK+G   L   KF    A  S   F + V+ + L +
Sbjct: 58  PREYFAPDAPPFRLMGREARAHRLEKLGVERLYEIKFNAGLAALSPRAFAENVIRDGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G+ F FGK RAG+  ILQ+ G + GF    I  L   +S  VSS+ IR AL++G 
Sbjct: 118 KHVVVGSDFCFGKGRAGNAAILQEFGREMGFGVT-IATLLEGESGQVSSTAIRAALSEGA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
              AA +LG+   I+  VI GE+ GRTLG+PTANM +      K G+YA+     D   +
Sbjct: 177 PRAAAAMLGHWHRIDGPVIGGEQRGRTLGYPTANMSIKGLHPPKFGIYAVLVDVLDGPHK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P         +E+FIFDF+ ++YG   +V   +YLRPE  F  +E   
Sbjct: 237 GQYHGAASLGVRPMFQ-GEEANVETFIFDFTGDLYGANLSVGLIEYLRPEATFDSLEAFI 295

Query: 296 IYMGEDEKKARKILES 311
             M  D  +AR +L +
Sbjct: 296 AQMDADCLRARSVLAA 311


>gi|262202095|ref|YP_003273303.1| riboflavin biosynthesis protein RibF [Gordonia bronchialis DSM
           43247]
 gi|262085442|gb|ACY21410.1| riboflavin biosynthesis protein RibF [Gordonia bronchialis DSM
           43247]
          Length = 323

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 145/326 (44%), Gaps = 16/326 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M V         +P      VV IG FDG+H GH  ++  A         P  +++F+PH
Sbjct: 1   MRVLR-WRGLDDIPADWGRCVVTIGVFDGVHRGHAQLISAATSAARERGVPSVLMTFDPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+  + + ++ E++G        FT   A  S + F   VLVE L  
Sbjct: 60  PAEVVRPGSHPPQLTTLTRRAELAEELGIDVFCVMPFTPALAARSPKDFAHDVLVESLHA 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G+ F FGK  AGD   L++ G K+GF    +  L    +   SS+ IR+ +  G 
Sbjct: 120 ADVVVGSNFTFGKKAAGDVAKLRELGGKFGFEVQDV-SLFGEHAVTFSSTYIRSCVAAGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD--- 234
           V  AA  LG    +E  V+ G+  GR LG+PTAN+       +  +GVYA  F       
Sbjct: 179 VELAAEALGRPHRVEGVVVRGDGRGRELGYPTANVAPPMHAAIPADGVYAAWFTVLGAGP 238

Query: 235 -------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT        +E+F+ D S ++YGQ   V F   +R    
Sbjct: 239 VVGQVEPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVGRIRAMEN 297

Query: 288 FKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++ L   M  D +KAR IL +  
Sbjct: 298 FSSVDALLDAMAADVEKARAILSAEQ 323


>gi|307256066|ref|ZP_07537854.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865488|gb|EFM97383.1| Riboflavin biosynthesis protein RibF [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 341

 Score =  327 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +    +  +  KG V++IGNFDG+HLGH  IL +     +  N P  V+ F P 
Sbjct: 22  MQLIRGLYNLANHKDLAKGSVISIGNFDGVHLGHQNILARLCDQALERNLPSVVMLFEPQ 81

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR    +             L     + K LE+ G   ++  +F    AN SA+ FI ++
Sbjct: 82  PREFFANKQANSTACIAPARLMRLRDKLKYLEQAGVDFVLCVRFNERFANLSADTFISEL 141

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L+V+ +  G  FRFG +R GD  +L+  G KY F       L ++  Q VSSS IR
Sbjct: 142 LVKQLQVRYLSVGDDFRFGANRTGDFALLRNAGLKYRFAVEDSQTL-SHAEQRVSSSLIR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
           TAL    ++ A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A++ +
Sbjct: 201 TALQLDDLVLAEKLLGKPYSICGRVAHGNKLGRTIGFPTANIMLNRLVTPLQGVFAVQIQ 260

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           TQ    ++G+AN G  PT+    P LLE  IFDF++ IYG+   V F   +R E+KF D 
Sbjct: 261 TQ-TGRHNGIANVGNRPTINGTKP-LLEVHIFDFNRSIYGEAIEVFFIRKIRNEVKFPDF 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  + +D ++A +  +
Sbjct: 319 EALKAQIEKDREQAVEFFK 337


>gi|330466371|ref|YP_004404114.1| riboflavin biosynthesis protein RibF [Verrucosispora maris
           AB-18-032]
 gi|328809342|gb|AEB43514.1| riboflavin biosynthesis protein RibF [Verrucosispora maris
           AB-18-032]
          Length = 309

 Score =  327 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +   +   + P      VV IG FDG+H GH   +  A+  A        V++F+PH
Sbjct: 1   MQRWRGYD---AAPGGWGRAVVTIGVFDGVHKGHQATIGYAVARARELGVQSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+ P+ + +++E +G   L    FT E +   AE F+  VLVE L  
Sbjct: 58  PAEVVRPGSHPAVLTEPARKAELIEALGVDVLCVVPFTPEFSRLPAEAFVHDVLVEHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G  +GF       L      + SS+ IR+ +  G 
Sbjct: 118 ALVVVGDNFRFGHRAAGDVALLEQLGRTFGFAVES-APLVAEAGTVFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG    +E  V+ G++ GR LGFPTAN+       +  +G+YA R   + +  
Sbjct: 177 VTAAASALGRPHRLEGVVVRGDQRGRELGFPTANLLCHRYAAIPADGIYAARLIRRGRRE 236

Query: 238 YSGVA-NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             G A + G NPT        +E++  DF+ ++YG+R  + F  +LR +I+F  IE L  
Sbjct: 237 PLGAAVSIGTNPTF-SGRERRVEAYALDFTGDLYGERLALDFVAHLRGQIRFDGIEPLVA 295

Query: 297 YMGEDEKKARKILE 310
            + +D ++ R+ L+
Sbjct: 296 QIAQDVERTRRALD 309


>gi|103487839|ref|YP_617400.1| riboflavin biosynthesis protein RibF [Sphingopyxis alaskensis
           RB2256]
 gi|98977916|gb|ABF54067.1| FMN adenylyltransferase / riboflavin kinase [Sphingopyxis
           alaskensis RB2256]
          Length = 309

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 4/306 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
            ++ +  +   L+GGV+A+GNFDG H GH  ++ +A++ A     P  V +F+PHP    
Sbjct: 3   RLDGHARIEAPLRGGVIALGNFDGFHAGHQAVVGRAVRHAKDEGRPAIVATFDPHPVRFF 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +   P F L+    ++++    G  A++   F    A  SAE+FI  +L++      V+T
Sbjct: 63  KPDVPPFRLTTLDQRQELFAAAGADAMLVLPFDAALAATSAEEFITGLLLDRYGAAGVVT 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FGK R+G+   L     + GF T  +  + ++  +++SSS IR AL  G    AA
Sbjct: 123 GADFVFGKGRSGNVVTLADHARRLGFFTEMVAPV-DDADEVISSSRIREALQAGDCATAA 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   FT+   V HG+K GR LGFPTAN+ +   +  + G+YA+  +  D     G AN
Sbjct: 182 RLLTRPFTVRGVVQHGDKNGRLLGFPTANIDMGNYLRPRYGIYAVTGKLPDGRVLKGAAN 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  P+  P    LLE   FDFS+++YG+   V+F  ++R E KF  ++ L   +  D +
Sbjct: 242 LGIRPSFDPPKE-LLEPHFFDFSEDLYGREIDVAFHAFIRAEAKFDSMDALMAQIAADCE 300

Query: 304 KARKIL 309
            A+ +L
Sbjct: 301 AAKALL 306


>gi|41408991|ref|NP_961827.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397350|gb|AAS05210.1| RibF [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 327

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 159/327 (48%), Gaps = 17/327 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M           +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PH
Sbjct: 1   MAGVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + ++++ ++LVE L V
Sbjct: 61  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK   G+   L++ GE++GF    +    E  +N++   SS+ IR+ + 
Sbjct: 121 VEVVVGENFTFGKKATGNVETLRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVD 180

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 181 AGDVVAAMEALGRPHRVEGVVVRGEGRGIQLGFPTANVAPPMYSAIPADGVYAAWFTVLG 240

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D   ++YGQ   + F   +R 
Sbjct: 241 HGPVTGTVIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRG 299

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF  ++ L + MG+D ++AR++L +
Sbjct: 300 QHKFDSVDDLVVAMGQDTERARQLLSA 326


>gi|319897523|ref|YP_004135720.1| bifunctional riboflavin kinase/fad synthetase [Haemophilus
           influenzae F3031]
 gi|317433029|emb|CBY81400.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae F3031]
          Length = 308

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNTNRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|300024115|ref|YP_003756726.1| riboflavin biosynthesis protein RibF [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525936|gb|ADJ24405.1| riboflavin biosynthesis protein RibF [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 308

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/314 (33%), Positives = 162/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           MHV H    ++ +P   +G  +AIGNFDG+H GH  ++ +A   A         + F PH
Sbjct: 1   MHVIHG---HKHVPPEHRGASIAIGNFDGVHRGHRALIREAKAKAREKGTASAAMVFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q +   F L+  + +  I EK+G   +    F  + A    E FI++VLV  L  
Sbjct: 58  PREFFQPNEVQFRLTTLNRKLAIFEKLGLDLVFVEPFDADLAALPGEAFIERVLVAGLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG  R G+  ++ + GE+ GF    +  +  + +   SSS +R  L +G 
Sbjct: 118 AHVVIGYDFYFGHKRGGNPELMVRSGEELGFGVTVMPPIAEDGAVF-SSSGVRLHLAQGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V    H+LG  + +   VI G K G  +G+PTAN+ +     L  G+YA+R    DQT Y
Sbjct: 177 VKGVTHMLGEPWRVSGRVIGGAKRGTGMGYPTANIPMPKGTTLGHGIYAVRTHLDDQT-Y 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              A  G  PT   +G  +LE F+FDF+ +IYG+   V F D++R + +F+  E+L + M
Sbjct: 236 DAAAYLGTRPTF-DDGHPVLEVFLFDFNGDIYGREIEVEFIDFIRSDRRFRSAEELVVQM 294

Query: 299 GEDEKKARKILESS 312
             D  +A+ +L ++
Sbjct: 295 EADIAQAKAVLSAN 308


>gi|56751037|ref|YP_171738.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechococcus elongatus PCC 6301]
 gi|81299303|ref|YP_399511.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechococcus elongatus PCC 7942]
 gi|56685996|dbj|BAD79218.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168184|gb|ABB56524.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus
           elongatus PCC 7942]
          Length = 315

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 8/311 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP---ITVLSFNPHPRTII 63
           + I   L        +A+GNFDGIHLGH  ++        + P    +V++FNPHP+   
Sbjct: 1   MRILDDLDPVSGPTAIALGNFDGIHLGHQQVIAPVRAAHRSHPDWMPSVVTFNPHPQAFF 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                + +++P + + ++L+ +G   L+   FT E AN + EQF+ +VLV+ L+ + +  
Sbjct: 61  SGDR-LPSITPVAEKAELLQGLGIEQLVLLPFTRELANLTPEQFVSEVLVQHLQARQISV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG+ R+G    LQ   +  G  T  +   + ++   VSSS IR AL +G    AA
Sbjct: 120 GQDFRFGRGRSGSAQDLQAIAQGRGIPTTIVPLFK-HRDLRVSSSAIRKALDQGQPELAA 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY--SG 240
             LG  + +   VI G+++GR LG PTAN+QL  D LL   GVYA R    +Q  +    
Sbjct: 179 AWLGRPYRLTGCVILGQQLGRQLGTPTANLQLPADKLLPRWGVYAGRAHLPEQGLHNLPA 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G+ PT+  +  + +E  + D+  + YGQ   V    +LRPE KF  +  L   + +
Sbjct: 239 VLNVGQRPTVTGDRSVSVEVHLLDWQGDCYGQLLQVDLLHFLRPEQKFDSLSALTQQIQQ 298

Query: 301 DEKKARKILES 311
           D + AR  L +
Sbjct: 299 DCRLARSQLAT 309


>gi|294677617|ref|YP_003578232.1| riboflavin biosynthesis protein RibF [Rhodobacter capsulatus SB
           1003]
 gi|3128303|gb|AAC16155.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
 gi|294476437|gb|ADE85825.1| riboflavin biosynthesis protein RibF [Rhodobacter capsulatus SB
           1003]
          Length = 307

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 120/315 (38%), Positives = 168/315 (53%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  + +      L    +G  VA+GNFDG+HLGH  +++ A       P+ +++F PHPR
Sbjct: 1   MQTYTHW---TGLSPEARGASVAMGNFDGVHLGHQSVIDLARGRE---PLGIITFEPHPR 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +    +  F L     +E  L K+G + L    F  E A    E F  KVL E L V  
Sbjct: 55  EVFAPEAAPFRLMNAEAREHRLAKLGVTRLYELPFGPELAGMDPETFAGKVLAEGLGVAH 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G  FRFGK RA     L   G++ GF    +  L +     VSS+NIR AL +G V 
Sbjct: 115 VTVGGDFRFGKGRAAGTAELIALGQRLGFDVT-VAPLLHIDGIEVSSTNIRKALAEGRVR 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTS 237
           +AA +LG+   IE +V+HG+K GR LGFPTANM ++   L K GVYA++          +
Sbjct: 174 DAAKMLGHLHRIEGEVMHGDKRGRDLGFPTANMSVARLHLPKLGVYAVKVDVLTGPQAGA 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G A+ G  P    N P  LE+F+FDF  ++YGQ  +V+  +YLRPE+KF  +  L   
Sbjct: 234 YFGAASLGVRPMFGENAP-NLETFLFDFEGDLYGQHLSVALVEYLRPEMKFDGLPALMKQ 292

Query: 298 MGEDEKKARKILESS 312
           M  D + AR+IL ++
Sbjct: 293 MAADCETAREILRTA 307


>gi|284050301|ref|ZP_06380511.1| riboflavin biosynthesis protein RibF [Arthrospira platensis str.
           Paraca]
 gi|291569871|dbj|BAI92143.1| riboflavin biosynthesis protein RibF [Arthrospira platensis
           NIES-39]
          Length = 340

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 166/342 (48%), Gaps = 31/342 (9%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA---------------IKIANNSPIT 51
           + I  S    L    VA+GNFDG H GH  ++                  IK    +P  
Sbjct: 1   MWITSSKDTVLTPTAVALGNFDGFHRGHQQVVRPILNPNEVAVDSQKVGFIKTDEKTPPV 60

Query: 52  -------VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
                  V++FNPHP+      +    L+P   +  IL + G   L+   F  + A+ + 
Sbjct: 61  AISGYGTVVTFNPHPQEFFTGQTK-KLLTPLPEKIDILRRFGVQQLVLLPFDKDLASLTP 119

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
            QF++++LVE+L+   V  G  FRFG+ R G    L+    +YG     +   ++     
Sbjct: 120 AQFVEQILVEYLQATRVSVGFDFRFGRHRMGSTEDLKAIASQYGIDVEIVSRFKSAYGDR 179

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKE 223
           +SSS IR +LT+GH+  A  LLG  +T+   V+ G+++GRTLGFPTAN+QL PD  L + 
Sbjct: 180 ISSSIIRESLTEGHLNRANQLLGRAYTLVGQVVQGQQLGRTLGFPTANLQLPPDKFLPQY 239

Query: 224 GVYAIRFRTQDQT------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
           GVYA+                 GV N G  PT+  + P  +E  + D+  ++YGQ  TVS
Sbjct: 240 GVYAVLVTGFAFGEQTTIAPQLGVMNIGCRPTVAGDNP-TVEVHLLDWHGDLYGQSLTVS 298

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
              +LRPE KF  +E+LK  +  D   AR  L++   L   D
Sbjct: 299 LEGFLRPEQKFASLEQLKAQIQRDCTHARTYLQARKNLPLLD 340


>gi|253998232|ref|YP_003050295.1| riboflavin biosynthesis protein RibF [Methylovorus sp. SIP3-4]
 gi|253984911|gb|ACT49768.1| riboflavin biosynthesis protein RibF [Methylovorus sp. SIP3-4]
          Length = 302

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 16/314 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF +   +   P       +AIGNFDG+HLGH  +L Q +    A      V++F PH
Sbjct: 1   MRVFRHFPASGQRP----PAALAIGNFDGVHLGHQALLRQLVQVAAARGLQPVVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + +   + G + +    F    A   A  F+Q +L   L  
Sbjct: 57  PREFFTPLQAPARLTSLREKLEHFIEAGVADVYVCHFNQRFAALEASAFMQDILRGQLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R G    L++     GF    + E++ +  + +SS+ +R AL  G 
Sbjct: 117 EAILVGDDFRFGARRQGGLDDLRQA----GFALESVPEIQLDGDR-ISSTRVRQALHDGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  ++I   V+HG K+GR LGFPTAN+ +  +     GVYA++         
Sbjct: 172 LPLASALLGRYYSISGKVVHGRKLGRQLGFPTANIHMRHERPALTGVYAVKLDG-----L 226

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+     L LE  + D+S ++Y +   VSF   LR E+KF  ++ LK  +
Sbjct: 227 PGVANLGVRPTIAGTPRLSLEVHLLDYSGDLYDRHVHVSFLKKLRDEMKFPGLDALKQQI 286

Query: 299 GEDEKKARKILESS 312
             D  +AR    S 
Sbjct: 287 ALDSGQARTFFASQ 300


>gi|145637268|ref|ZP_01792929.1| hypothetical protein CGSHiHH_05187 [Haemophilus influenzae PittHH]
 gi|145269520|gb|EDK09462.1| hypothetical protein CGSHiHH_05187 [Haemophilus influenzae PittHH]
          Length = 308

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I +  +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQL---IRVLHNANRVLQGCALTIGNFDGVHLGHQAVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGENAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|312139339|ref|YP_004006675.1| riboflavin kinase [Rhodococcus equi 103S]
 gi|311888678|emb|CBH47990.1| riboflavin kinase [Rhodococcus equi 103S]
          Length = 323

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 98/325 (30%), Positives = 157/325 (48%), Gaps = 18/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  ++    +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PH
Sbjct: 1   MQRWRGLD---DVPADWGRCVLTIGVFDGVHRGHAQLISRAVDAARERGIPSVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++ E++G        FT E    S E+++ ++LVE L V
Sbjct: 58  PAEVVRPGSHPAQLTTLPRRAELAEELGIDVFCVMPFTTEFMKLSPERYVHEILVERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG+  AG+  +L++ G ++GF    ++ L    +   SS+ IR+ +  G 
Sbjct: 118 SEVVVGENFTFGRKAAGNVDLLRRTGARFGFAVDGVN-LLAEHAVTFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-- 235
           V  AA  LG    +E  V+HG+  GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 VAAAAEALGRPHRVEGVVVHGDGRGRGLGFPTANIAPPMYSAIPADGVYAAWFTVLGPGP 236

Query: 236 --------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y+   + G NPT        +E+F+ D   ++YGQ   V F   +R   K
Sbjct: 237 VEGTVEPGKRYAAAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDFVQRVRGMEK 295

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  +E L   MG D +KAR IL  +
Sbjct: 296 FDSVEALIEEMGRDAEKARAILAEA 320


>gi|145630059|ref|ZP_01785841.1| hypothetical protein CGSHi22421_08408 [Haemophilus influenzae
           R3021]
 gi|145632349|ref|ZP_01788084.1| hypothetical protein CGSHi3655_07839 [Haemophilus influenzae 3655]
 gi|144984340|gb|EDJ91763.1| hypothetical protein CGSHi22421_08408 [Haemophilus influenzae
           R3021]
 gi|144987256|gb|EDJ93786.1| hypothetical protein CGSHi3655_07839 [Haemophilus influenzae 3655]
 gi|301169688|emb|CBW29289.1| bifunctional riboflavin kinase/FAD synthetase [Haemophilus
           influenzae 10810]
          Length = 308

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|254776113|ref|ZP_05217629.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 324

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + ++++ ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK   G+   L++ GE++GF    +    E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKATGNVETLRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVVAAMEALGRPHRVEGVVVRGEGRGIQLGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D   ++YGQ   + F   +R 
Sbjct: 238 HGPVTGTVIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF  ++ L + MG+D ++AR++L +
Sbjct: 297 QHKFDSVDDLVVAMGQDTERARQLLSA 323


>gi|167856255|ref|ZP_02478988.1| riboflavin biosynthesis protein [Haemophilus parasuis 29755]
 gi|167852612|gb|EDS23893.1| riboflavin biosynthesis protein [Haemophilus parasuis 29755]
          Length = 325

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 164/317 (51%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +       +  KG V+ IGNFDG+HLGH  IL++ ++ AN    P  V+ F P 
Sbjct: 11  MQLIRGVHNLAHCADFSKGCVLTIGNFDGVHLGHQQILKRLLEKANALRLPSVVMIFEPQ 70

Query: 59  PRTIIQSSS----PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           PR               L     +   L+++GF  L+  +F  + A    EQFIQ +LV+
Sbjct: 71  PREFFAKKQDKLTAPARLMRLRDKIHALQEIGFDYLLCVRFNAQFAQLQPEQFIQHLLVD 130

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L VK +  G  F+FG  R+G    LQ+ G+++GF           + Q +SSS IR AL
Sbjct: 131 KLNVKYLSVGDDFQFGYKRSGTFDSLQQAGKQFGFDVEN-SHSHCLEQQRISSSLIRDAL 189

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
              ++  A  +LG  + I   V HG K+GRT+GFPTAN+ L+  +   +GVYA++ +T  
Sbjct: 190 HNDNLQLAEKMLGKPYAICGRVAHGNKLGRTIGFPTANLMLNRLVTAIQGVYAVKVKT-S 248

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              ++ +AN G  PT+    P LLE  +FDF   IYGQ   V F   +R EIKF   ++L
Sbjct: 249 AGIFNSIANVGNRPTINGTKP-LLEVHLFDFDNSIYGQAIEVRFLKKVRSEIKFASFDEL 307

Query: 295 KIYMGEDEKKARKILES 311
           K+ + +D +  R   + 
Sbjct: 308 KLQIEKDVQAVRLFFQE 324


>gi|39996587|ref|NP_952538.1| riboflavin biosynthesis protein RibF [Geobacter sulfurreducens PCA]
 gi|39983468|gb|AAR34861.1| riboflavin biosynthesis protein RibF [Geobacter sulfurreducens PCA]
 gi|298505603|gb|ADI84326.1| riboflavin kinase and FAD synthetase [Geobacter sulfurreducens
           KN400]
          Length = 322

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 103/324 (31%), Positives = 178/324 (54%), Gaps = 10/324 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F +I EI + LP+     VV IGNFDG+HLGH  I  +  + A   +    V++F P
Sbjct: 1   MKIFRSIDEIREPLPSP----VVTIGNFDGVHLGHREIFRRVKREAARLDGVSMVITFTP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++     +  ++  + +E ++E  G   L+   FT E A   AE+F+ ++LV  + 
Sbjct: 57  HPLKVLGLRKELRLINTYAEKELLIEASGIDCLLTIPFTAEFAAIGAERFVGEILVGRIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK ++ G  + FG++R GD  +L++ GE++GF    ++++ + ++   SSS +R  +  G
Sbjct: 117 VKKLVIGYDYAFGRNREGDVAMLRRMGEEHGFEVEVLEQIASGETVY-SSSAVRRMIAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +V     L+G  +++   V+HG + G+ LGFPTAN++   +++   GVYA++ R  D   
Sbjct: 176 NVREVVSLIGRHYSVGGTVVHGRRRGKDLGFPTANLRTEKELIPAAGVYAVKVRVDDTIR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G  N G NPT   N  + +E  I DF  ++YG+   V F D +R E+++ D+  LK  
Sbjct: 236 -DGACNIGNNPTF-GNEEVTVEVHILDFDGDLYGKEIRVYFVDRVREELRYPDLNALKEG 293

Query: 298 MGEDEKKARKILESSYPLSERDRI 321
           +  D  + R++L     +  RD +
Sbjct: 294 ISRDVARCRELLAGVSIIEYRDYL 317


>gi|86607031|ref|YP_475794.1| riboflavin biosynthesis protein RibF [Synechococcus sp. JA-3-3Ab]
 gi|86555573|gb|ABD00531.1| riboflavin biosynthesis protein RibF [Synechococcus sp. JA-3-3Ab]
          Length = 310

 Score =  327 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 103/305 (33%), Positives = 162/305 (53%), Gaps = 6/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + +   L   L+   VAIGNFDG+HLGH  +L+           TVL+F+PHP+ ++   
Sbjct: 1   MHVTSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVR-TVLTFHPHPQEVLTGR 59

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             +  L+PP+ +  +L +MGF  ++   FT   A    ++FIQ VL + L V+ +  G  
Sbjct: 60  RQL-LLTPPAEKLALLAQMGFEQVVLLPFTPAFARQPPQEFIQTVLEQGLRVRHLSVGWD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  R+G+   LQ  G +       I E +  K + VSSS IR AL  G V  A  LL
Sbjct: 119 FCFGHRRSGNAQTLQAWGSERCIPVEVIPEAQ-LKGERVSSSRIRAALATGEVAAATELL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT-QDQTSYSGVANF 244
           G  + +  +V+ G++ GR LGFPTAN++L P+  L ++GVY++      +  +  GV N 
Sbjct: 178 GRPYRLIGEVVPGDRRGRELGFPTANLRLPPEKFLPRDGVYSVWVNVPAEAAALPGVMNI 237

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT        +E  + D++ ++YGQ   V+   ++RPE +F  +  L   + +D + 
Sbjct: 238 GHRPTFA-GLQHTVEVHLLDWTGDLYGQEVQVALQGFIRPERRFPSVADLIQQIRQDCQT 296

Query: 305 ARKIL 309
           AR+ L
Sbjct: 297 ARQQL 301


>gi|114569163|ref|YP_755843.1| riboflavin kinase / FMN adenylyltransferase [Maricaulis maris
           MCS10]
 gi|114339625|gb|ABI64905.1| riboflavin kinase / FMN adenylyltransferase [Maricaulis maris
           MCS10]
          Length = 314

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 167/314 (53%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V      +  LP   +G V+A+GNFDG+H+GH  ++  A  +A   ++P+    F+PH
Sbjct: 1   MKVLRG---HSGLPQDDRGAVIALGNFDGVHMGHRHVIGLAADLAQSLDAPLGAALFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     + +ILE +G   L    F++  A  +   F+  VL   L +
Sbjct: 58  PRRFFAPDAPAFRLMGTGRRNRILESLGVQQLHVLPFSMGMARMTPADFVDTVLAGGLGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++TG  FRFG  R G    L +    +G  T F  EL  N +  VSS+ IR A+  G 
Sbjct: 118 AGIVTGEDFRFGAGRTGATDDLARLCAGHGIKTAF-AELHGNGADKVSSTRIRKAIHDGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
           +  AA LLG  + +E  V  G++ GRT+GFPTAN+ L   +    GVYA+R      T  
Sbjct: 177 MQAAATLLGTPWAVEGVVRRGDQRGRTIGFPTANLTLGDYVRPDYGVYAVRVGIDGDTPS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +GVAN G+ PT+      LLE  + D+S ++YG+   V FFD+LR E +F  ++ LK+ 
Sbjct: 237 LAGVANIGKRPTVDGATE-LLEVHLLDWSGDLYGRTLEVEFFDHLRSEKRFDGLDALKVQ 295

Query: 298 MGEDEKKARKILES 311
           + ED   AR++L +
Sbjct: 296 IAEDAAAARRVLSA 309


>gi|148253247|ref|YP_001237832.1| FMN adenylyltransferase / riboflavin kinase [Bradyrhizobium sp.
           BTAi1]
 gi|146405420|gb|ABQ33926.1| FMN adenylyltransferase [Bradyrhizobium sp. BTAi1]
          Length = 326

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 172/323 (53%), Gaps = 7/323 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  F  I       + +KG VVA+GNFDG+HLGH  ++E A+++      P   L+F PH
Sbjct: 1   MAAFTIIRDTTPPADIIKGAVVAMGNFDGVHLGHRAVIEAAVEMGKSHGRPALALTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     ++P F L+    + ++L   G    +   F    A  SA+ FI   L+  L V
Sbjct: 61  PRRFFSPNTPQFRLTDERAKLRLLAGTGLQGAVVMTFDKGRAQTSAQDFIHHELIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  F FGK R G   +L     K G     +    +   + VSS+ IR AL +G 
Sbjct: 121 AGIAVGYDFHFGKGRVGSPTLLASEAPKLGIEVD-VQPHVDIDERPVSSTAIREALAEGQ 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQ 235
           V  A  +LG  + + S+VIHGEK GR LG+PTANM+L  D  L+ G+YA+R    R  ++
Sbjct: 180 VAEATAMLGGPWFVTSEVIHGEKRGRDLGYPTANMRLDRDCGLRHGIYAVRVGRGRGANR 239

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVANFGR PT   NG  LLE+F+FDF   +YG+   ++F  ++R E KF  IE L 
Sbjct: 240 VLIDGVANFGRRPTF-DNGAPLLETFLFDFKDSLYGEVLDIAFIGFIREEAKFSSIEALI 298

Query: 296 IYMGEDEKKARKILESSYPLSER 318
             M +D  KAR +L+++  L  R
Sbjct: 299 RQMDDDSAKARALLQANAGLFPR 321


>gi|292492814|ref|YP_003528253.1| riboflavin biosynthesis protein RibF [Nitrosococcus halophilus Nc4]
 gi|291581409|gb|ADE15866.1| riboflavin biosynthesis protein RibF [Nitrosococcus halophilus Nc4]
          Length = 310

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 106/307 (34%), Positives = 155/307 (50%), Gaps = 4/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    +L    +GGV  IGNFDGIHLGH  +L +    A     P  +++F P P     
Sbjct: 5   IRGLYNLQPCHRGGVATIGNFDGIHLGHQAVLGRLAAKAAEFQRPSLLITFEPSPEEFFT 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L+    + + L       ++  +F    A   A+ FI+ VLVE L ++ +I G
Sbjct: 65  PEGAPARLTRFREKIQALRCQPLDWVLCLRFDHALAGMEADDFIRIVLVEKLGLRYLIVG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+DR GD  +LQ+ GE YGF    +  L   + + VSS+ IR ALT+G +  A  
Sbjct: 125 EDFRFGRDRCGDLNLLQRAGEHYGFEVATMPTLC-LEGERVSSTRIREALTRGDLAQAEK 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG  + +   ++ G+K GRTLGFPTAN+ L        GV+A+  +        GVAN 
Sbjct: 184 FLGRPYHMSGRIVEGDKRGRTLGFPTANIGLHRRRTPFTGVFAVAVQGLAAAPLPGVANV 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+      LLE  + DF  +IYG+   V+F   LRPE +F+ +  L+  + +D   
Sbjct: 244 GVRPTI-GGRRALLEVHLLDFEGDIYGRYVQVTFLRQLRPEQRFESLSALRQQIEKDCVA 302

Query: 305 ARKILES 311
           AR+   +
Sbjct: 303 AREFFAA 309


>gi|16124956|ref|NP_419520.1| riboflavin biosynthesis protein RibF [Caulobacter crescentus CB15]
 gi|221233677|ref|YP_002516113.1| riboflavin kinase/FMN adenylyltransferase [Caulobacter crescentus
           NA1000]
 gi|13421926|gb|AAK22688.1| riboflavin biosynthesis protein RibF [Caulobacter crescentus CB15]
 gi|220962849|gb|ACL94205.1| riboflavin kinase/FMN adenylyltransferase [Caulobacter crescentus
           NA1000]
          Length = 313

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 3/312 (0%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRT 61
              +   ++LP   +G  VA+GNFDG+H GH  ++ QA K  + + +P+ V+SF+PHPR 
Sbjct: 3   LKTVHAWKNLPPEHRGASVALGNFDGVHRGHQQVIAQAAKAALTDKTPLGVISFDPHPRR 62

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           + + S P F L     Q + L  +G        F  E A++S  +F++KVLVE L V  V
Sbjct: 63  LFRPSEPAFKLMTQGQQARALAGLGVGVFYLLPFDFEMASFSDREFVEKVLVEGLGVTHV 122

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G    FG+ R G   +L+  G++YGF     + +     +  SS+ +R AL  G    
Sbjct: 123 AAGFDISFGRGRTGSPELLRTYGQEYGFTVSIAEPVAGGDGEKFSSTGVRDALRGGQPEQ 182

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
           AA +LG  F IE  V  G+++GR LGFPTAN+++   ++ K GVYA R R  D     GV
Sbjct: 183 AAAILGRPFAIEGVVRRGQQLGRQLGFPTANVEVEDYVVPKLGVYATRTRLPDGREVPGV 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G NPT        LE+++FDF +++YGQ        +LRPE+KF  +E +   +  D
Sbjct: 243 ANLGNNPT-TGLVETRLETWLFDFDEDLYGQIIETDLVAFLRPELKFDSLELMIEQIRRD 301

Query: 302 EKKARKILESSY 313
           E+ AR I+   +
Sbjct: 302 EQAARAIVAPGF 313


>gi|256425475|ref|YP_003126128.1| riboflavin biosynthesis protein RibF [Chitinophaga pinensis DSM
           2588]
 gi|256040383|gb|ACU63927.1| riboflavin biosynthesis protein RibF [Chitinophaga pinensis DSM
           2588]
          Length = 311

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 112/317 (35%), Positives = 175/317 (55%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  ++     LP  L+  V+ IG FDG+H GH  I++Q  + A   +    +++F+PH
Sbjct: 1   MRIHRDL---THLPA-LRQAVITIGTFDGVHSGHRYIIQQLQETAAACDGETVIITFDPH 56

Query: 59  PRTIIQSSSPI-FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++Q   P    L+    + ++L K G   L+   FT E +  SA+ ++++ L+E   
Sbjct: 57  PREVLQPGGPPVKLLTTLDEKIELLSKEGIDHLVIVPFTREFSELSAQAYLEEFLIEQFN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             T+I G   RFG +R G   +L+    +YGF  + I +   +    VSS+ IR +L +G
Sbjct: 117 PHTIIIGYDHRFGHNREGGLELLEAEQNRYGFRLIEIPQQVVHD-LAVSSTKIRKSLQEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
           ++  A  LLGY + +E  VIHG+K+GR LGFPTAN+ +S    ++  EG+YAIR     Q
Sbjct: 176 NIQLANELLGYPYFVEGTVIHGDKMGRQLGFPTANIAVSDVRKLIPVEGIYAIRVYLDKQ 235

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T  +GV + G  PT      L +E+ IFDFS+EIY +   V    Y+R   KF +I+ L
Sbjct: 236 STPLNGVMSIGTRPTFN-GADLRVEAHIFDFSEEIYDKVIRVELISYIRANQKFDNIDAL 294

Query: 295 KIYMGEDEKKARKILES 311
              M +D ++AR +L S
Sbjct: 295 VAQMHKDSQEARTVLAS 311


>gi|119717411|ref|YP_924376.1| riboflavin kinase / FMN adenylyltransferase [Nocardioides sp.
           JS614]
 gi|119538072|gb|ABL82689.1| riboflavin kinase / FMN adenylyltransferase [Nocardioides sp.
           JS614]
          Length = 310

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/315 (33%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPH 58
           M ++ ++E    +P+ L    V IGNFDG+HLGH  ++ +A + A    +TV+  +F PH
Sbjct: 1   MQIWRSLE---EVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++      TL+   I+ ++L   G  A++   F    A ++ E+F+++VLV+ L  
Sbjct: 58  PMAVLRPEHAPTTLTSLEIRAELLADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD   L++ GE++GF    I    +   Q+ SS+ +R +L  G 
Sbjct: 118 AVVVVGANFRFGNKAAGDVATLRQAGERHGFEAEGIA--LDGGPQVWSSTYVRMSLAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-T 236
           V  AA  LG  + +   V+ G++ GR LGFPTAN+       +  +GVYA R R  D   
Sbjct: 176 VAGAAEALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGE 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           ++    + G NPT        +E+++ D    ++YG    VSF D LR  + F+ I+KL 
Sbjct: 236 TFPAAISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLV 295

Query: 296 IYMGEDEKKARKILE 310
             M +D  +AR++L 
Sbjct: 296 AQMNDDVDRARELLA 310


>gi|239982644|ref|ZP_04705168.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
 gi|291454484|ref|ZP_06593874.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
 gi|291357433|gb|EFE84335.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces albus J1074]
          Length = 321

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 12/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERAREAGLPTVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+P   + ++  ++G  AL+   FT E +  S  +F+ KVLV+ L  
Sbjct: 58  PSEVVRPGTHPPLLAPHHRRAELCAELGVDALLVLPFTREFSQLSPAEFVAKVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AGD  +L + G  Y +    +D +           SS+  R  + 
Sbjct: 118 RLVVEGPNFRFGHRAAGDVAVLTELGATYDYEVEVVDLVVRGAAGGGVPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA     + 
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGYPTANVETLPYTAIPADGVYAGWLNAEG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YGQ  +V F  ++R + KF  +++
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGQHVSVDFLAFVRGQAKFASLDE 295

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L   M  D  + R+++ ++ P
Sbjct: 296 LLEAMSRDVARCRELVAAAEP 316


>gi|317407732|gb|EFV87661.1| riboflavin biosynthesis protein [Achromobacter xylosoxidans C54]
          Length = 335

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 102/313 (32%), Positives = 165/313 (52%), Gaps = 9/313 (2%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           + I++SLP   +     + IGNFDG+H GH  +L +  ++A +  +   V++F PHPR  
Sbjct: 19  LRIHRSLPPPAQRAPSALTIGNFDGVHRGHQAMLARVCQVARDRGLTPAVMTFEPHPREY 78

Query: 63  I-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
                 +       +S    +   L + G S ++  +F    A  SA  FI+ +LV  ++
Sbjct: 79  FATLNQRPELAPTRISGLRDKLAALARYGISQVVVERFNARLAEMSANAFIENLLVRGMD 138

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G  FRFG  R+GD  +L++ G ++GF    + ++ +     +SSS +RTAL  G
Sbjct: 139 TKWLLVGEDFRFGHKRSGDIDLLREAGLRHGFEVQTLADVTDRHGHRISSSEVRTALAVG 198

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A HLLG+ F I   VIHG+K+GRTLGFPT N++++     + G+Y ++     + +
Sbjct: 199 DLDRARHLLGHPFHISGHVIHGQKLGRTLGFPTMNLRVAERCAARSGIYVVQVYGLAERA 258

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VA+ G  PT+   G +LLE+ + D +   YG+   V F   LR E KF D+  L   
Sbjct: 259 LPAVASLGVRPTVEDRGRVLLEAHLLDETVNAYGKLVRVEFLQKLRDEEKFPDLPSLTAA 318

Query: 298 MGEDEKKARKILE 310
           + ED + AR    
Sbjct: 319 IAEDARNARAYFA 331


>gi|16272900|ref|NP_439124.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae Rd KW20]
 gi|260580053|ref|ZP_05847883.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae RdAW]
 gi|1573988|gb|AAC22622.1| riboflavin kinase / FMN adenylyltransferase (ribF) [Haemophilus
           influenzae Rd KW20]
 gi|260093337|gb|EEW77270.1| riboflavin biosynthesis protein RibF [Haemophilus influenzae RdAW]
          Length = 312

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 5   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 62  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQLADVFIEQTLVNHLHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 122 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 181 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 240

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 241 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 299

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 300 EKDVETAKAFFNS 312


>gi|1175472|sp|P44957|RIBF_HAEIN RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
          Length = 308

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQLADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF   + LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFDDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|312795298|ref|YP_004028220.1| riboflavin kinase / FMN adenylyltransferase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167073|emb|CBW74076.1| Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC
           2.7.7.2) [Burkholderia rhizoxinica HKI 454]
          Length = 370

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 4/310 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTI 62
           + + + LPN        + IGNFDG+H GH  +L Q    A     P+ V++F PHPR  
Sbjct: 17  VRVFRGLPNAESRAPCALTIGNFDGVHRGHQALLAQVRAAATARALPVCVMTFEPHPREF 76

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +     ++    + + L + G   ++   F    A+ S   F++ ++V  L  + V+
Sbjct: 77  FDPAGAPPRITMLRDKLEALRRNGVDRIVVEHFNHTFASQSPAAFVEHIIVNGLHARWVM 136

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FR+G  RAGD   L+  G +YGF    +  + +     +SSS +R +L  G +  A
Sbjct: 137 IGDDFRYGAKRAGDFLSLKAAGAQYGFEVEQMPTVADPCGARISSSAVRASLVAGDLAAA 196

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              LG    I   V+HG K+GR LGFPT N+ +S       G++ +R    +     GVA
Sbjct: 197 RAALGRAIVISGHVVHGMKLGRDLGFPTLNLPISHKRPALAGIFIVRVHGIEAGPLPGVA 256

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F + LR E KF D+E L   +  D 
Sbjct: 257 SLGWRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLEKLRDEQKFVDLEALGRAIACDV 316

Query: 303 KKARKILESS 312
             AR+   + 
Sbjct: 317 AAAREYFATQ 326


>gi|88813006|ref|ZP_01128249.1| hypothetical protein NB231_03997 [Nitrococcus mobilis Nb-231]
 gi|88789784|gb|EAR20908.1| hypothetical protein NB231_03997 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 94/312 (30%), Positives = 152/312 (48%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +        +L    +     IGNFDG+H GH  +L++          P  V++F PH
Sbjct: 15  MELIRG---GHNLRARHRECAATIGNFDGVHRGHSAVLQRLRVAAAERGMPAVVVTFEPH 71

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    ++    + + L + G   ++  +F    A   AE F++++L+  L V
Sbjct: 72  PREYFTPDTAPARITGVRDKLRALAQAGVERVLCLEFGPRLAAMEAEDFVREILLAGLGV 131

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG+ R GD  +L +   ++GF    +  +       VSS+ +R AL  G 
Sbjct: 132 RFLMIGDDFRFGRGRRGDYSLLTRAAVEHGFELTRVPTV-TLAGARVSSTRVRQALGAGD 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AAHLLG  + I   VI G+++GR LG+PTAN++L       EG++ +R R  D    
Sbjct: 191 LELAAHLLGRTYRISGRVIRGDRLGRRLGWPTANIRLHRARPALEGIFTVRVRGLD-GVL 249

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  P++     ++LE  + DF  ++YGQ   V F   LR +I+F  +E L   +
Sbjct: 250 PGVASVGNRPSV-DGRQMVLEVHLLDFEGDLYGQHIEVEFVRRLRDQIRFSSLEALSEQI 308

Query: 299 GEDEKKARKILE 310
             D   AR    
Sbjct: 309 ARDVAVARAYFR 320


>gi|42523014|ref|NP_968394.1| riboflavin kinase / FAD synthase ribC [Bdellovibrio bacteriovorus
           HD100]
 gi|39575219|emb|CAE79387.1| riboflavin kinase / FAD synthase ribC [Bdellovibrio bacteriovorus
           HD100]
          Length = 314

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+   +    L   L   VV IGNFDG+HLGH  ++E  ++ A     P  V +F+PH
Sbjct: 1   MQVYQGAK---QLSAPLAASVVTIGNFDGVHLGHQQLIENVVREAQYFGVPSVVYTFHPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++      + L     Q++  EK G   +I  +FT + A  + ++F+   +++ L  
Sbjct: 58  PVKVLHPERATYRLFDLKDQQEQFEKRGIENVIIEEFTRDFAKVTPQEFLDSYVLKQLNP 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           KT++ G  F FG DRAG+   L+K   + G   + I   +   +  VSS+ IR  L  G 
Sbjct: 118 KTLVVGHDFNFGADRAGNIPFLEKYCAEKGIRLIIIPPFQYEGAV-VSSTRIREHLKNGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A  LL   + +   V  G + GRT+G PTAN+    + + ++GVY    +      +
Sbjct: 177 VQKANDLLARTYYLRGHVEKGFQRGRTIGVPTANVHPDVEFIPRQGVYCTLTKI-GAHMH 235

Query: 239 SGVANFGRNPTM--VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
             + N G NPT      GP+ +E+ +FDF  ++YG    V    +LR E KF  IE+LK 
Sbjct: 236 PSITNIGVNPTFHESGKGPVKIETHLFDFDAQLYGIEVEVYLLKFLRDEKKFSGIEELKN 295

Query: 297 YMGEDEKKARKILES 311
            +  D  +ARK  + 
Sbjct: 296 QIQNDMAEARKYFDE 310


>gi|197118976|ref|YP_002139403.1| bifunctional riboflavin kinase/FAD synthetase [Geobacter
           bemidjiensis Bem]
 gi|197088336|gb|ACH39607.1| riboflavin kinase and FAD synthetase [Geobacter bemidjiensis Bem]
          Length = 323

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 109/321 (33%), Positives = 171/321 (53%), Gaps = 8/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +F +I     +   L+   V IGNFDG+HLGH  I  +  + A        V++F PH
Sbjct: 1   MVIFRSI---SDIKEKLRHPAVTIGNFDGVHLGHREIFRRVRERAAELSGVSVVVTFVPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ +   I  ++    +E ++E  G   L+   F  E A   A  F+QKVLV+ + V
Sbjct: 58  PLKVLGAHKGIRLITTRREKEFLIESAGIDYLLEIPFDREFAAVPAADFVQKVLVDAIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G  + FG+ R G+  +L+  GE+YG+    +D + +N + + SS+ +R  ++KG 
Sbjct: 118 ESLVIGYDYAFGRGREGNVQLLRGMGERYGYSVEVLDPI-SNGATVYSSTKVRDMVSKGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     +LG  + I   V+HG + GR LGFPTAN+ +  D+L   GVYA++         
Sbjct: 177 VEGVVGVLGRHYAITGTVVHGHQRGRGLGFPTANLAMEKDLLPAAGVYAVK-VCIGSDLL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT   NG L LE F+FD  +++YG   TV F + LR E +F D++ LK  +
Sbjct: 236 DGACNIGTNPTF-GNGALSLEVFLFDLDRDLYGLEVTVFFIERLREERRFDDLQALKEQI 294

Query: 299 GEDEKKARKILESSYPLSERD 319
             D  + R IL  + P+   D
Sbjct: 295 ALDVSRCRGILHDAEPVGAGD 315


>gi|90407185|ref|ZP_01215373.1| hypothetical protein PCNPT3_03141 [Psychromonas sp. CNPT3]
 gi|90311761|gb|EAS39858.1| hypothetical protein PCNPT3_03141 [Psychromonas sp. CNPT3]
          Length = 309

 Score =  325 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   I    +L    +G V++IGNFDGIHLGH ++L + ++ A     P  +++F P 
Sbjct: 1   MELVRGI---HNLKTRHQGCVLSIGNFDGIHLGHQIVLSRLLQEAKRLRVPSMLMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +   +     LS    +   L+K+    L+   FT E AN  A  FI ++L++ L V
Sbjct: 58  PAELFLGAKAPARLSRLRDKFVQLQKLKLDRLLCISFTREFANMEAHTFINELLIKKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG  R G+  +L++ G+K GF  +    L  ++   +SS+ IR  L  G 
Sbjct: 118 KFLVVGDDFHFGYQRKGNFELLKEAGKKQGFVVLDTQSLM-HQDLRISSTAIRQFLASGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG ++ I   V HG+K+GRT+G PTAN+ L   +    GV+ +  +      Y
Sbjct: 177 LQQAQKMLGRKYNIAGRVSHGKKLGRTIGVPTANIFLKRRVAPVSGVFVVSVQGIAGRIY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  I +F  ++YG +  V     LR E+KF   + LK  +
Sbjct: 237 RGVANIGTRPTVN-GTEQQLEVHILNFEGDLYGSQLQVILEKKLRDEVKFCSFDALKEQI 295

Query: 299 GEDEKKARKILESS 312
            +D  +A++  +++
Sbjct: 296 KKDITQAQQWHQNN 309


>gi|254821339|ref|ZP_05226340.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium intracellulare ATCC 13950]
          Length = 325

 Score =  325 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 20/328 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K       P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARSVPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + ++++ ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK   G+   L++ G+++GF    +    E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKATGNVETLRRAGDRFGFAVESMSLLSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ G   G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVVAATEALGRPHRVEGVVVRGHGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D   ++YGQ   + F   +R 
Sbjct: 238 HGPVTGTVIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTDADLYGQHVALDFVGRIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESS 312
           + KF  +E+L + MGED ++AR IL + 
Sbjct: 297 QHKFDSVEELIVAMGEDTERARTILSTQ 324


>gi|94267065|ref|ZP_01290705.1| Riboflavin kinase / FAD synthetase [delta proteobacterium MLMS-1]
 gi|93452222|gb|EAT02876.1| Riboflavin kinase / FAD synthetase [delta proteobacterium MLMS-1]
          Length = 321

 Score =  325 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 108/316 (34%), Positives = 168/316 (53%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           MH+  ++    S+ + L    V IGNFDG+HLGH  +      +   +      ++F PH
Sbjct: 1   MHIHRSL---ASITDPLPYACVTIGNFDGVHLGHQQLFHTVSQLARQHQGTAVAITFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     I  +S P  + +++E+ G   L+   FT E A+ +AE+F+ +VLV  L V
Sbjct: 58  PLQVVCPEKGIKLISNPEQKIELIEQAGVDELLILPFTKELASMAAEEFVDRVLVATLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FG+ R GD   L+ RG K GF    I   +     +VSSS +R  +T G 
Sbjct: 118 KELVVGYDYAFGRGRRGDPEFLKARGVKQGFRVEVIPAFQV-CGMVVSSSKVRELVTAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
           +     LLG  + +   V  G++ G + LGFPTAN+ L   D+  K GVY +     D  
Sbjct: 177 MEEVTCLLGRYYQLRGVVQEGKRRGGSILGFPTANLTLNENDLCPKHGVY-VTQVIYDGK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   +G L  E+ IFDF+Q+IYG+   ++   +LRPE +F   E+L  
Sbjct: 236 CYGGVLNIGYNPTFA-DGKLAAETHIFDFNQDIYGKPIKLNLLKHLRPERRFAGPEELAA 294

Query: 297 YMGEDEKKARKILESS 312
            + +D  +A+K+L ++
Sbjct: 295 QIAKDTTEAQKVLAAA 310


>gi|319953430|ref|YP_004164697.1| riboflavin biosynthesis protein ribf [Cellulophaga algicola DSM
           14237]
 gi|319422090|gb|ADV49199.1| riboflavin biosynthesis protein RibF [Cellulophaga algicola DSM
           14237]
          Length = 309

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 7/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTL 72
           ++ +   V IG FDG+H+GH  +L++ I  A   N   TVL+F PHPR I+Q  + I  L
Sbjct: 11  DNQQPTAVTIGTFDGVHIGHRKLLDRLINDAKLLNLKATVLTFFPHPRMILQQDANIKLL 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + KILE +G   L+ Y F+ E +  SA  F++ +LV+ L  K +I G   RFG++
Sbjct: 71  NTIDEKIKILENIGLDYLMIYPFSKEFSRLSATDFVESILVKGLASKKIIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  D   L   G+ Y F    I     ++   VSS+ IR AL +G +  A   LGY + +
Sbjct: 131 RNADIKDLISFGKIYSFEVEEIPAQEIDE-VSVSSTKIRKALEEGDITTANAYLGYNYML 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              VIHG+ +G+ L FPTAN+ +     ++   GVY ++    + T Y G+ N G NPT+
Sbjct: 190 TGTVIHGKGLGKQLSFPTANIHIEENFKLIPLNGVYVVKSEIDNATVY-GMMNIGFNPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E   FDF Q++YG++  +   + LR E KF  +E+LK  + +D+K +  ++ 
Sbjct: 249 -SGKEKSIEVHFFDFDQDLYGKKIQIDILERLRDEHKFNSVEELKKQLEQDKKTSLSLIA 307

Query: 311 S 311
            
Sbjct: 308 K 308


>gi|297569627|ref|YP_003690971.1| riboflavin biosynthesis protein RibF [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925542|gb|ADH86352.1| riboflavin biosynthesis protein RibF [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 326

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 160/316 (50%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M ++ +++    +P       V IGNFDG+H+GH  +      +   +      ++F PH
Sbjct: 3   MKIYTSLD---QIPAPFPHACVTIGNFDGVHMGHQQLFNTVSDLARRHRGTGVAITFEPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++    I  +S    + +++   G  AL+   FT E A   AEQF+ +VLV  L V
Sbjct: 60  PLQVVRPEIGIKLISTYEQKVELISMAGIDALLVIPFTQEFAAMDAEQFVDQVLVGTLGV 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  + FGK R GD   L+  G+K  F    I   + +   +VSSS +R  +  G 
Sbjct: 120 RELVVGYDYAFGKGRRGDADFLEACGKKQAFTVRVIPAFKVD-GMVVSSSKVRELVAAGR 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
           + +   LLG  + +   V  G+K G + LGFPTAN+ L   D+  K GVY +        
Sbjct: 179 MEDVTKLLGRYYQMRGVVQVGKKRGGSILGFPTANLSLNEHDLCPKHGVY-VTQVVYGGK 237

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   +  L  E+ IFDF+Q+IYGQ   ++   +LR E KF   E+L  
Sbjct: 238 CYGGVLNIGYNPTFADS-KLAAETHIFDFNQDIYGQPIKINLLKHLRGERKFSGPEELAA 296

Query: 297 YMGEDEKKARKILESS 312
            +  D  +A+++L ++
Sbjct: 297 QIARDVTEAKEVLAAA 312


>gi|294012278|ref|YP_003545738.1| riboflavin kinase [Sphingobium japonicum UT26S]
 gi|292675608|dbj|BAI97126.1| riboflavin kinase [Sphingobium japonicum UT26S]
          Length = 312

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 112/318 (35%), Positives = 166/318 (52%), Gaps = 8/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   H+   +  +P HL+GG++A+GNFDG H GH  ++ +A+ +A     P  V +F+PH
Sbjct: 1   MERLHS---SAPMPAHLRGGIMALGNFDGFHAGHQAVVRRAVALARDQGRPAIVATFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  +P F L+    +E++  + G  A++ + FT E A    + F+  +      V
Sbjct: 58  PMRLFRPDTPWFRLTTLDQRERLFARAGADAMLVFDFTRELAALDPQAFVDLLA--RWGV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FG+DRAG    L + G   G     +  +     +I+SS+ IR AL  G 
Sbjct: 116 AGVVTGEDFTFGRDRAGSIATLAELGAPLGLTAQAVAPITGQDGEIISSTRIRQALKSGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LL   FTIE  V HG+K+GRT+GFPTAN+ +   +    G+YA+R    D    
Sbjct: 176 CETATRLLTRPFTIEGVVQHGDKLGRTIGFPTANIDMGHYLRPAYGIYAVRALLPDGRVL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G AN G  P++ P    LLE   FDFS+ +Y QR  V    YLRPE K   ++ L   +
Sbjct: 236 DGAANLGVRPSIDPPKE-LLEPHFFDFSESLYDQRIEVQLIHYLRPEAKLDGLDALMAAI 294

Query: 299 GEDEKKARKILESSYPLS 316
             D   AR+IL  +  L+
Sbjct: 295 ARDCDDARQILAGTPHLA 312


>gi|332880027|ref|ZP_08447711.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332682023|gb|EGJ54936.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 308

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 111/297 (37%), Positives = 171/297 (57%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG FDG+HLGH  I+++ ++ A+ + +  TV +F PHPR I+Q    +  +   
Sbjct: 14  KPTVITIGTFDGVHLGHQKIIKRVVETAHKNGLLATVFTFFPHPRMIVQHDQQLKLIHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +++ L+ +G   LI   F    AN SAE F+ ++LV+ L  K VI G    FGK+R  
Sbjct: 74  AEKKQFLQSLGVDLLIVQPFNEAFANLSAEAFVFELLVKHLRAKKVIIGYDHHFGKNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   ++  GE+YGF    I  ++      VSS+ IR AL +G V  A H LG  ++    
Sbjct: 134 NIDNMRLFGEQYGFSVEEI-SVQEVDEVSVSSTKIRQALNEGKVEIAEHYLGVPYSFTGK 192

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG K+GRT+GFPTAN+Q+     ++ K+GVY +    + +  Y G+ + G+NPT+   
Sbjct: 193 VVHGLKLGRTIGFPTANLQVEASYKLIPKDGVYVVYSLIEGRKVY-GMMSIGKNPTIQGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G   +E + FDF+Q++YGQ  T+ F  YLR E KF  +  LK  + +DE  ARK + 
Sbjct: 252 G-ASIEVYFFDFNQDLYGQDLTIYFVKYLREERKFSSVSLLKKQIQDDEAAARKAIA 307


>gi|311898684|dbj|BAJ31092.1| putative riboflavin kinase/FMN adenylyltransferase [Kitasatospora
           setae KM-6054]
          Length = 314

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +H +E    +P      VV IG+FDG+H GH LI+ + +++A        V++F+PH
Sbjct: 1   MQRWHGLE---EIPGDWGRSVVTIGSFDGVHRGHQLIINRVVELAGELGARSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++E++G  A++   FT E +  S E F++ VLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPQPRRAELVEQLGVDAVLVLPFTAEFSKESPEYFVRSVLVDALHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AGD G+L + G    F    +D          +  SSS  R  + 
Sbjct: 118 KAVVEGPNFRFGHRAAGDVGLLAELGRADDFTVEVVDLQVRGAAGDGEPFSSSLCRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
            G +   A +LG    +E +V+ G + GR LG+PTAN+  ++   +  +GVYA    T D
Sbjct: 178 AGDLAGVAEILGRPHRVEGEVVRGAQRGRELGYPTANVDTVAHSAIPADGVYAGWL-TAD 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NPT        +E++  D    ++YGQ   V F  +LR   KF  IE 
Sbjct: 237 GETMPAAISVGTNPTF-DGTHRTVEAYAIDRVGLDLYGQHVAVDFLAWLRGMEKFDSIEA 295

Query: 294 LKIYMGEDEKKARKILE 310
           L   M ED K+AR + E
Sbjct: 296 LLERMAEDVKRARDLTE 312


>gi|125747095|gb|ABN55909.1| bifunctional flavokinase/FAD-synthetase [Streptomyces davawensis]
          Length = 319

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI++  +  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIQHTVDRARELGLPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +++  +    L+P   + +++  +G  A++   FT E +N S   FI KVL++ L  
Sbjct: 58  PKEVLRPGTHPPLLAPHHRRAELMADLGVDAVLVLPFTTEFSNLSPADFIVKVLIDKLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AGD   L + G+ Y F    +D   +      Q  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHRAAGDVMYLAELGKTYDFDVEVVDLFVSGEAGGGQPFSSTLTRRLVG 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LG PTAN++  P   +  +GVYA     Q 
Sbjct: 178 EGDVEGAMEILGRPHRVEGVVVRGAQRGRELGVPTANVETLPHTAIPADGVYAGWLHAQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NPT        +E+ + D    ++YG    V F  Y+R ++KF  ++ 
Sbjct: 238 -EAMPAAISVGTNPTF-DGTERTVEAHVIDRVGLDLYGLHVAVDFLAYVRGQVKFDSLDA 295

Query: 294 LKIYMGEDEKKARKILESS 312
           L   MGED K +R++  ++
Sbjct: 296 LIERMGEDIKVSRELTAAA 314


>gi|88858004|ref|ZP_01132646.1| bifunctional protein [Pseudoalteromonas tunicata D2]
 gi|88819621|gb|EAR29434.1| bifunctional protein [Pseudoalteromonas tunicata D2]
          Length = 306

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 104/311 (33%), Positives = 156/311 (50%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    ++ +  +G V+ IGNFDG+HLGH  +L   I  A     P TV+ F P 
Sbjct: 1   MELVRGV---HNIRDRHRGCVLTIGNFDGVHLGHVAVLNGLIADAKRLGLPSTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     ++    L+    +  +L+K+G   +I  +F    A  + E F+  +L + L V
Sbjct: 58  PQEFFAKNNAPARLTRLRDKLTLLKKIGIERVICIQFNATFAKLAPEYFVDVILHQKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG +R+GD  +LQ+ GEK           R   S+ VSS+ IR +L    
Sbjct: 118 KALTVGDDFKFGINRSGDFNLLQQLGEKLNISVQNTASFRQQNSR-VSSTAIRKSLENAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  +LG+ ++I   VIHG K GR LGFPTAN+ L   +    GV+A+   T +    
Sbjct: 177 FAAAQQMLGHSYSISGRVIHGWKKGRELGFPTANIALKRQVSPLHGVFAVSVATAN-GIL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE  +FDFS ++YG+  +V     LR E KF  +  L   +
Sbjct: 236 RGVANIGCKPTLN-GKTTLLEVHLFDFSGDLYGKFISVEIVKKLRDEQKFDTLAHLISQI 294

Query: 299 GEDEKKARKIL 309
             D K A++  
Sbjct: 295 QADVKIAKQCF 305


>gi|119489872|ref|ZP_01622627.1| hypothetical protein L8106_30460 [Lyngbya sp. PCC 8106]
 gi|119454300|gb|EAW35451.1| hypothetical protein L8106_30460 [Lyngbya sp. PCC 8106]
          Length = 363

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 172/365 (47%), Gaps = 60/365 (16%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK----------------------- 43
           + I  SL   L    VA+GNFDGIH GH  +++   K                       
Sbjct: 1   MWITSSLNTVLTPTAVALGNFDGIHRGHRQVIQPIFKQSQSFSSSLLSQQQPEILLTQVD 60

Query: 44  ------------------------------IANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
                                          ++    TV++F+PHP+      S    L+
Sbjct: 61  SPLQPPTPAQNYRSGVSLTPEENRLNFDAGESHQRYATVVTFHPHPQEFFTGQSK-KLLT 119

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           P   + + L+ MG   ++   F  + A+ S  +F+++++++ L+   V  G  FRFGK R
Sbjct: 120 PIDEKIECLQMMGVEQMVLLAFDQQLASLSPPEFVEEIVIKHLQASHVTIGFDFRFGKGR 179

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    LQ     YG     +D     + + +SSS IR AL +G++  A  LLG  +T+ 
Sbjct: 180 TGTAKDLQAIAAPYGVEVTIVDRYPCEQGERISSSMIRQALEQGNLQRAHQLLGRDYTLV 239

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRF----RTQDQTSYSGVANFGRNP 248
             V+ G+++GRT+GFPTAN+Q+ P+  L   GVYA++        + T+Y  V N G  P
Sbjct: 240 GQVVPGQQLGRTIGFPTANLQVPPEKFLPSYGVYAVQVFSSGEALNLTAYPAVMNIGCRP 299

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+    P  +E ++ D+S ++YGQ  T+   ++LRPE KF  +++LK  +  D  +A+K+
Sbjct: 300 TVEGQQP-TVEVYLLDWSGDLYGQTLTICLKEFLRPEQKFASLDELKAQIVADCVQAKKV 358

Query: 309 LESSY 313
           L S  
Sbjct: 359 LNSEQ 363


>gi|325982870|ref|YP_004295272.1| riboflavin biosynthesis protein RibF [Nitrosomonas sp. AL212]
 gi|325532389|gb|ADZ27110.1| riboflavin biosynthesis protein RibF [Nitrosomonas sp. AL212]
          Length = 322

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 13/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           MH +    +    P       + IGNFDG+HLGH  +L +    A+    P   ++F PH
Sbjct: 1   MHTWRRTSVYAKKPI-----ALTIGNFDGVHLGHQAMLARLKNAASQLGLPACAMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    +   L + G   ++  +F  + A  S E+FI  +L + L V
Sbjct: 56  PREFFTPHQAPVRLTGLREKMNGLIRTGIDCIVICRFNSDFARLSPERFITHILNQELHV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  RAGD   L     +  F    +  +  +  Q VSSS IR AL  G+
Sbjct: 116 RWLLVGDDFRFGTRRAGDSATLLALSAENDFTVEVMPSVLVDN-QRVSSSAIRQALAAGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--- 235
           +  A  LLG  + I   VI G+K+GR +GFPTAN+QL        G++ +     +    
Sbjct: 175 LDEAGKLLGRPYNISGRVIDGDKLGRQIGFPTANIQLKHS-PPLNGIFVVSVYGANPSSP 233

Query: 236 -TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               +GVA+ G  PT+  NG  +LE  +FDF+ +IYGQR  V F   LR E K+ DI  L
Sbjct: 234 EIPLAGVASLGVRPTIHDNGKPVLEVHLFDFNDDIYGQRLRVDFLHKLRNEEKYADISTL 293

Query: 295 KIYMGEDEKKARKILESS 312
              + +D  +A++   ++
Sbjct: 294 VRQIEKDVAQAKEFFMTA 311


>gi|225181389|ref|ZP_03734833.1| riboflavin biosynthesis protein RibF [Dethiobacter alkaliphilus AHT
           1]
 gi|225167970|gb|EEG76777.1| riboflavin biosynthesis protein RibF [Dethiobacter alkaliphilus AHT
           1]
          Length = 310

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 152/316 (48%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNP 57
           M +   I   QS      G  VVA+GNFDG+HLGH  I+   +K    + +   VL F+P
Sbjct: 1   MEIIQGI---QSFRKKCDGCAVVALGNFDGVHLGHREIINTTVKTAKKHGAKSAVLIFSP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP +++        L     +  +L ++G   +I + F  E A    E F  +VL   L 
Sbjct: 58  HPLSVLAPDKAPALLMTMEDRIHMLGQVGVDYVIVHPFNREFAGMPPESFATEVLHGKLG 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V  V+ G  + FG+   G+   L+  GE+ GF    ++ +  +  + V S+ +R  L +G
Sbjct: 118 VSGVVVGFDYSFGRRGLGNPAELKLLGERLGFTVEVVNPVSVH-GEPVGSTAVRKLLLEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            V  AA +LGY F +  +V+HG+  GRTLGFPTAN+Q+  +I+    GVY  +     + 
Sbjct: 177 RVEAAADMLGYPFYLRGEVVHGDGRGRTLGFPTANLQVPCEIIRPAHGVYLTKA-LLGEE 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  V N G+ PT        +E  + D  + +YG    V F   +R E  F   E L+ 
Sbjct: 236 RFWAVTNVGKRPTFCK-TEPSVEVHLLDTQKNLYGHELMVEFIQKIREEKAFSGPEALRA 294

Query: 297 YMGEDEKKARKILESS 312
            +  D   AR I+  +
Sbjct: 295 QIRNDIDLARTIIAKA 310


>gi|134299800|ref|YP_001113296.1| riboflavin biosynthesis protein RibF [Desulfotomaculum reducens
           MI-1]
 gi|134052500|gb|ABO50471.1| FMN adenylyltransferase / riboflavin kinase [Desulfotomaculum
           reducens MI-1]
          Length = 311

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 100/311 (32%), Positives = 164/311 (52%), Gaps = 10/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+ +++  + +       +VA+GNFDGIHLGH  ++ +A+ +A   N    VL+F PH
Sbjct: 1   MRVYKSLKGLKDI---YPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L     +++I+ ++G   LI   FT E A+ S E+F++++LV+ + V
Sbjct: 58  PLMVLKPEMAPAMLLDQESKQRIMAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  + FG   +G    L+    +YG+    I  ++  + Q+VSS+ IR  L +G 
Sbjct: 118 RGIVVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGE-QVVSSTLIRNKLAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
           V+ A   LGY    E  V+ G++  G  LGFPTAN+     ++   +GVY++     D  
Sbjct: 177 VIAAKRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVE-LDGE 235

Query: 237 SYSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +Y GVAN G  PT   N P   +E  + DF  +IYG++  V +   LR E KF  +  L 
Sbjct: 236 TYLGVANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLI 295

Query: 296 IYMGEDEKKAR 306
             +  D   AR
Sbjct: 296 NQIQADVLSAR 306


>gi|148828140|ref|YP_001292893.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae PittGG]
 gi|148719382|gb|ABR00510.1| hypothetical protein CGSHiGG_08390 [Haemophilus influenzae PittGG]
          Length = 308

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 161/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F+FG  R G+  +LQ   +++GF          + +Q +SS+ IR AL    
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFGFIVEDNRSFCLD-AQRISSTAIREALANDD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   +   +GVYA++ R +    +
Sbjct: 177 LQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVNPIKGVYAVKVRLKSGEIF 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F   +R EIKF     LK+ +
Sbjct: 237 NGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCHKIRNEIKFPSFGDLKVQI 295

Query: 299 GEDEKKARKILES 311
            +D + A+    S
Sbjct: 296 EKDVETAKAFFNS 308


>gi|218440941|ref|YP_002379270.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7424]
 gi|218173669|gb|ACK72402.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7424]
          Length = 338

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 110/334 (32%), Positives = 170/334 (50%), Gaps = 34/334 (10%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ------AIKIANNSP------------I 50
           +  S    L    +A+GNFDGIHLGH  ++         +     SP             
Sbjct: 4   VKSSTDQILTPTAIALGNFDGIHLGHQKVISSIWTHSSLVAPPERSPVKDPKKIYSDCYS 63

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           TV++FNPHPR           L+P + +  +LE++G   LI   F  + A+ S + F+++
Sbjct: 64  TVVTFNPHPREFFSGQKK-QCLTPLAEKILLLEQLGVEQLILLPFDQKLASLSPQAFVEE 122

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN------NKSQI 164
           +LVE L+ + V  G  FRFG  R G    L+    ++G          N      +++  
Sbjct: 123 ILVEKLQGRRVSVGADFRFGCQRTGGAEDLKAIASQFGIEVFITSLKTNFSADDPSENLR 182

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKE 223
           +SSS IR AL +G + +A  +LG  +T+   V+ G+K+GRTLGFPTAN++L    +L + 
Sbjct: 183 ISSSRIRQALAEGKIEDANQMLGRPYTLTGTVVTGQKLGRTLGFPTANLELPQDKLLPRF 242

Query: 224 GVYAIRFRTQDQ-------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTV 276
           GVYA+R   ++        T + GV N G  PT+    P  +E  + D+S ++YGQ   V
Sbjct: 243 GVYAVRVEIKEHLLDTDSKTGFQGVINIGCRPTVAGESP-TVEVHLLDWSGDLYGQCLIV 301

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           S   ++R E KF  ++ LK  +G D + ARKIL+
Sbjct: 302 SLEQFIRSEAKFPSLDALKAQIGADCELARKILQ 335


>gi|114331429|ref|YP_747651.1| riboflavin biosynthesis protein RibF [Nitrosomonas eutropha C91]
 gi|114308443|gb|ABI59686.1| riboflavin kinase / FMN adenylyltransferase [Nitrosomonas eutropha
           C91]
          Length = 325

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 157/317 (49%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +      ++  P       + IGNFDG+HLGH  ++ +  + A        V++F PH
Sbjct: 1   MRITRRAAASKEEPV-----ALTIGNFDGVHLGHQAMIARLKRAARRLGAASCVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    + ++L  +G   +  Y+F    A  SAE F+ ++L++ + V
Sbjct: 56  PRELLMPDRAPARLTNLREKLELLASLGVDRVQIYRFNHAFAKISAELFVTRILLQEMNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  F FG  R+GD  +LQK   + G   + +          VSS+ +R AL    
Sbjct: 116 CWLLVGEDFCFGARRSGDVALLQKLFSESGGRELEVMSPVVLDELRVSSTAVRHALASDD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG  FT+   V+ G K+G+ LGFPTAN+QL     L  G++ +    ++ + +
Sbjct: 176 LDLAAELLGRPFTMGGRVVDGLKLGKKLGFPTANIQLKDHHPLLNGIFVVEASWRNGSGF 235

Query: 239 ----SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GVA+ G  PT++     +LE  +FDF ++IYGQR  + F   LR E KF D+E L
Sbjct: 236 TQRVRGVASLGVRPTVLEYAQPVLEVHLFDFDEDIYGQRLRIEFLQKLRDEEKFPDMETL 295

Query: 295 KIYMGEDEKKARKILES 311
              M +D   A+     
Sbjct: 296 VKQMEQDVVHAKAYFSQ 312


>gi|86609648|ref|YP_478410.1| riboflavin biosynthesis protein RibF [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558190|gb|ABD03147.1| riboflavin biosynthesis protein RibF [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 310

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 6/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + I   L   L+   VAIGNFDG+HLGH  +L+           TVL+F+PHP+ ++   
Sbjct: 1   MHITSDLAQTLRPTAVAIGNFDGLHLGHQKVLQPIRDSLQGVR-TVLTFHPHPQEVLTR- 58

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            P   L+PP+ +  +L +MGF  ++   FT   A    ++FIQ VL + L V+ +  G  
Sbjct: 59  RPQLLLTPPAEKLDLLAQMGFEQVVLLPFTPAFACQPPQEFIQTVLEQGLRVRHLSVGWD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  R+G+   LQ  G +       I E + N  + VSSS IR AL  G V  A  LL
Sbjct: 119 FCFGHRRSGNAQTLQAWGSERCIPVEVIPETKLN-GERVSSSRIRAALATGEVSTAEALL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT-QDQTSYSGVANF 244
           G  + +  +V+ G++ GR LGFPTAN++L P+  L ++GVY++         +  GV N 
Sbjct: 178 GRPYRLTGEVVQGDQRGRQLGFPTANLRLPPEKFLPRDGVYSVWVDVPAAAAALPGVMNI 237

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT        +E  + D++ ++Y Q   V+   ++RPE +F  +  L   + +D + 
Sbjct: 238 GHRPTFA-GLQHTVEVHLLDWTGDLYRQEVRVALRGFIRPERRFPTVADLIQQIQQDCQT 296

Query: 305 ARKIL 309
           AR+ L
Sbjct: 297 ARQQL 301


>gi|256820203|ref|YP_003141482.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea DSM
           7271]
 gi|256581786|gb|ACU92921.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea DSM
           7271]
          Length = 308

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 108/297 (36%), Positives = 173/297 (58%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  I+E+ +  A    +  T+ +F PHPR ++Q    +  +   
Sbjct: 14  QPTVLTIGTFDGVHLGHQKIIERVVATARQEGLLATIFTFFPHPRMVVQHDKSLKLIHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++++L+++G   L+   F    A  +AE+F+  +LV+ L VK VI G   RFG++R  
Sbjct: 74  EEKKQLLQRLGVDLLVVQPFNEAFAQLTAEEFVSTILVQHLNVKKVIIGYDHRFGRNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   ++  GEKYGF    I  ++      VSS+ IR AL KG V+ A H LG  +++   
Sbjct: 134 NISDMRLFGEKYGFAVEEI-SVQEVDEVSVSSTKIREALNKGDVITAEHYLGTPYSLTGT 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG K+GRTLG+PTAN+Q++ D  ++ K+GVYA+     ++  Y G+ + G+NPT+   
Sbjct: 193 VVHGLKLGRTLGYPTANIQVTEDYKLIPKDGVYAVYSYIDERKVY-GMMSIGKNPTIEGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G   +E + FDF+ ++Y +  T+ F  YLR E KF  +  LK  + +DE  ARK + 
Sbjct: 252 G-ASIEVYFFDFNGDLYDRELTIYFVKYLREERKFSSVALLKKQLQDDETTARKAIA 307


>gi|290957014|ref|YP_003488196.1| riboflavin kinase (FAD synthetase) [Streptomyces scabiei 87.22]
 gi|260646540|emb|CBG69637.1| putative riboflavin kinase (FAD synthetase) [Streptomyces scabiei
           87.22]
          Length = 317

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 101/321 (31%), Positives = 158/321 (49%), Gaps = 12/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LIL  A++ A     P   ++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLILRHAVERARERGVPAVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  S   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMADLGVDAVLVLPFTSEFSRLSPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AGD   L + G+ Y F    +D          Q  SS+  R  +T
Sbjct: 118 KAVVEGPNFRFGHKAAGDVAYLVELGKTYDFEVEVVDLFVTGEAGGGQPFSSTLTRKLVT 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVEGAREILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHV-D 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  ++R + KF  ++ 
Sbjct: 237 GEAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHAAVDFLSFVRGQAKFDSLDA 295

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L + MGED K+ R+++ S  P
Sbjct: 296 LLVAMGEDVKRCRELIGSYRP 316


>gi|78358544|ref|YP_389993.1| riboflavin kinase / FMN adenylyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78220949|gb|ABB40298.1| riboflavin kinase / FMN adenylyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 314

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNP 57
           M +   + EI   L     G  V IGNFDG+H GH  ++ +  A     + P  V++F P
Sbjct: 1   MQIARQLQEITLDLS---GGSCVTIGNFDGVHNGHRKLIGRMMAKAAKASLPGVVVTFCP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        ++    +  +LE +G    +  +FT E A    E+F++ +LV+ L 
Sbjct: 58  HPLRVLVGPHTPPFITDYEKKLDLLEALGVDLTLMLQFTRELAALEPEEFVRSILVDGLN 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK ++ G  + FGK R G   +L + GEKYGF    +D +  + +  VSS+ IR  +  G
Sbjct: 118 VKELVVGYDYSFGKGRKGHFELLVELGEKYGFSCERLDPVIIDGAV-VSSTRIRDMIKAG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            V     L+   + +   V+HG+K G   LGFPTAN+++  +++   GVYA+     D  
Sbjct: 177 DVWGVRPLMDRFYVVRGTVVHGKKRGGRLLGFPTANLEVRDELVPGPGVYAVWVEV-DGN 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N  L +E++I DF ++IYG    ++F   LR E KF  ++ L  
Sbjct: 236 LYKGVTNIGYNPTF-GNETLSVETYIMDFDRDIYGWELRLNFVHRLRDERKFSGLDDLMT 294

Query: 297 YMGEDEKKARKILESS 312
            +  D +  R+IL+S 
Sbjct: 295 QIRSDVELGRQILDSQ 310


>gi|149185344|ref|ZP_01863661.1| riboflavin biosynthesis protein [Erythrobacter sp. SD-21]
 gi|148831455|gb|EDL49889.1| riboflavin biosynthesis protein [Erythrobacter sp. SD-21]
          Length = 313

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 5/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           ++    LP  L+G ++A+GNFDG HLGH  + ++AI  A     P  + +F+PHP    +
Sbjct: 4   LDHRDPLPESLRGAIIALGNFDGFHLGHQAVAKEAIDWARAEGRPAIIATFDPHPVRFFK 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +  F L+    ++++    G +A++ + F  E A  +AE F++ +L E L  K V+TG
Sbjct: 64  PDAAPFRLTTLEQRQELYLAAGATAMLVFHFDGELAGTTAEDFVRVLLAEKLGAKGVVTG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FGK R G+   L + G++ G     +D + +     VSSS +R AL +G+   AA 
Sbjct: 124 GDFTFGKARGGNFERLVELGKEVGIEARAVDPVMD-GGAPVSSSRVRDALREGNPQEAAR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGVAN 243
           LL   F I   V HG+K GR +G+PTAN+ +   +  K G+YA+  R         G AN
Sbjct: 183 LLTRPFAIRGVVQHGDKRGREIGYPTANLSIEHYLRPKYGIYAVTGRILSTGQELKGAAN 242

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  P   P    LLE + FDFS ++YGQ   V+F  +LR E KF  +++L   M +D  
Sbjct: 243 IGVRPQFEPPKE-LLEPYFFDFSGDLYGQEVEVAFHHFLRGEAKFDHLDELTAQMEKDCS 301

Query: 304 KARKILES 311
            AR +L +
Sbjct: 302 DARHLLSA 309


>gi|160872471|ref|ZP_02062603.1| riboflavin biosynthesis protein RibF [Rickettsiella grylli]
 gi|159121270|gb|EDP46608.1| riboflavin biosynthesis protein RibF [Rickettsiella grylli]
          Length = 310

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 4/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQ 64
           I  + ++     G V  IGNFDG+H GH  +++  IK+A     P  V+ F PHP+    
Sbjct: 5   IRNSYNIKPRQYGCVATIGNFDGLHRGHQKVIQSLIKLARQFHRPTCVIIFEPHPQEFFY 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +    L     + K L+ +G   ++  +F    A  SA  F++K+L+E L +K ++ G
Sbjct: 65  RENAPARLMRFREKFKSLQALGIDRVLCLRFNKRLAECSATDFVKKILIEKLGIKGLMIG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFGK R GD  +L+  G +YGF       L  +  + + SS +R A+ +     A  
Sbjct: 125 DDFRFGKARQGDWVLLKNLGREYGFKVFSTPTLLFDNER-IGSSRVRNAVKQADFKLAER 183

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+ FT+   VI+G++ GR LGFPTAN+ L   I   EGV+ ++         +GVAN 
Sbjct: 184 LLGHSFTLSGRVIYGDQRGRLLGFPTANVGLHRRIAPLEGVFIVKVYGLASIPIAGVANC 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PTM      LLE ++FDF++ IYGQ   + F + +R E KF+ IE LK  + +D   
Sbjct: 244 GTRPTMNGLKN-LLEVYLFDFNRTIYGQFIEIEFLEKIRDEKKFESIETLKQRIAKDVAT 302

Query: 305 ARKIL 309
           A++  
Sbjct: 303 AKEYF 307


>gi|302542136|ref|ZP_07294478.1| riboflavin biosynthesis protein RibF [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302459754|gb|EFL22847.1| riboflavin biosynthesis protein RibF [Streptomyces himastatinicus
           ATCC 53653]
          Length = 318

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 155/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  +   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHQRRAELMAALGVDAVLILPFTQEFSRLTPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AG+   L++ G  Y +    ID          +  SS+ +R  + 
Sbjct: 118 RVVVEGPNFRFGHRAAGNVDSLRELGTTYDYEVEVIDLYERGAAGGGEPFSSTLVRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     + 
Sbjct: 178 EGDVAGAMEVLGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPADGVYAGWLTAEG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             S     + G NP         +E++  D    ++YG    V F  +LR + KF  IE 
Sbjct: 238 -ESMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAFLRGQEKFDSIEA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M  D K+A +++E 
Sbjct: 296 LLERMAADVKRASELVEE 313


>gi|312128868|ref|YP_003996208.1| riboflavin biosynthesis protein ribf [Leadbetterella byssophila DSM
           17132]
 gi|311905414|gb|ADQ15855.1| riboflavin biosynthesis protein RibF [Leadbetterella byssophila DSM
           17132]
          Length = 311

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 167/317 (52%), Gaps = 14/317 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++HN++  Q         VV  G FDG+HLGH  I+++ I+ A        +L+F PH
Sbjct: 1   MKIYHNLKDFQP----KGNAVVTTGTFDGVHLGHKKIIKRLIEKAKEIGGESVLLTFWPH 56

Query: 59  PRTIIQSSSPIFT---LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P+ ++   S       LS    + ++LE +G   L+   FT E +  S E++I++VL+  
Sbjct: 57  PKLVLSPDSHTRVTRILSTIEEKTELLETLGLDHLVILPFTREFSELSCEKYIEEVLISG 116

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
              K ++ G   RFGK+R G    L +  E++      I+  +   +  +SS+ IR A+ 
Sbjct: 117 FGTKAMVIGYDHRFGKNREGGIDYLIQHSERFKIEIEEINR-QEIDNITISSTKIRKAIE 175

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQ 233
           +G +  A  LLG  +     V+ G ++GR +G+PTAN+Q   +  ++ K GVYA+    +
Sbjct: 176 EGDIQTANELLGRNYDFCGTVVKGRQLGRQIGYPTANVQTQNEFKLIPKNGVYAVYAWVR 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Q  + GV N G  PT+   G +  E +IFDFS +IYG+   V   D++R E KF  IE 
Sbjct: 236 GQK-FGGVMNIGVRPTVEGKG-ITQEVYIFDFSDDIYGESVKVEIVDFIREEQKFDSIEA 293

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +D   +++IL+
Sbjct: 294 LIQQIKQDVIASQRILQ 310


>gi|329890604|ref|ZP_08268947.1| riboflavin biosynthesis protein RibF [Brevundimonas diminuta ATCC
           11568]
 gi|328845905|gb|EGF95469.1| riboflavin biosynthesis protein RibF [Brevundimonas diminuta ATCC
           11568]
          Length = 309

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 109/294 (37%), Positives = 154/294 (52%), Gaps = 3/294 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I   + L +  KG  VA+G FDG+H GH  ++  A + A+    P+ V+SF+PHPR + Q
Sbjct: 5   IRDWRGLTDAQKGAAVAVGAFDGVHRGHQAVIASAREAADRLGVPLAVVSFDPHPRRLFQ 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             +  F L  P    + L  +G   L    F  E A  S E+F ++VL E L ++    G
Sbjct: 65  PEAAPFRLMTPDQMARALAPLGVDRLYLLPFDREMAGMSDEEFARRVLSEGLGIRHAAVG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FGK R+G   +LQ  GE  GF     D + +     +SSS +R AL  G +  AA 
Sbjct: 125 FDFTFGKGRSGSPALLQAYGETLGFTVSVTDRIDDASGLKLSSSAVREALKAGDMDRAAA 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +LG  F I+ +VIHG+K GRT+G PTAN+ +   +    GVYA R R  D     GVAN 
Sbjct: 185 ILGRPFAIQGEVIHGDKRGRTIGVPTANIAMGDYMRPAYGVYATRTRLPDGRVVKGVANL 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           G  P        LLE ++ DF + +YGQ        +LR E+KF D++ LK+ +
Sbjct: 245 GVRPMF-EIEEPLLEVWLLDFDESLYGQVLETELVAFLRGEMKFDDLDALKVQI 297


>gi|296106519|ref|YP_003618219.1| riboflavin kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648420|gb|ADG24267.1| riboflavin kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|307609729|emb|CBW99240.1| riboflavin biosynthesis protein RibF [Legionella pneumophila 130b]
          Length = 328

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 150/304 (49%), Gaps = 5/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKALRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A   A  F Q  L E L+++ ++ G  FRFGK+R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTPALYFAQFYLFEALKIRYLLVGQDFRFGKNREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+  G  Y        +    +++ +SS+ IR AL +G++  AA LLG  +++   
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLI-ENEKISSTRIREALQQGNLRFAAKLLGRPYSMCGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT+     
Sbjct: 194 VIKGDGRGRQWGIPTANLGIHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPTVAGTKN 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++  
Sbjct: 253 I-LEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKTYLKQNWLD 311

Query: 316 SERD 319
           S  D
Sbjct: 312 SAID 315


>gi|145589919|ref|YP_001156516.1| riboflavin biosynthesis protein RibF [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048325|gb|ABP34952.1| FMN adenylyltransferase / riboflavin kinase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 316

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 154/318 (48%), Gaps = 11/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M+VF       +         + IGNFDG+H GH  +L+Q +           V++F PH
Sbjct: 1   MNVFRGPTQFSA----GLACALTIGNFDGVHRGHRALLKQLVDGATERGLVSCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           +     +   L ++G   ++   F    A  S E+F+ +++V+ L  
Sbjct: 57  PKEFFSPEQAPPRILNLRDKLAALAELGIDRVVVEHFNTAFARLSPEEFVSEIIVKRLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F +G  RAGD   L+  GEKYGF    I  +  N  + +SSS +R AL  G 
Sbjct: 117 KWILIGDDFCYGAKRAGDFASLKAAGEKYGFEVSSIQTILEN-GERISSSALRNALGSGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI----LLKEGVYAIRFRTQD 234
           +L A  LLG  ++I   VIHG+++GR LGFPT N+ ++  +        G++  +     
Sbjct: 176 MLQAEKLLGRPYSISGHVIHGQQLGRQLGFPTLNLAVANHLHHRKPATTGIFTAQVLGLS 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             +   VA+ G  PT+   G +LLE+ +FD+ Q++YG+  TV   + +R E K+  +  L
Sbjct: 236 DKALPAVASLGVRPTVEDEGRVLLETHVFDYQQDVYGKIITVELLEKIRDEAKYDGLVAL 295

Query: 295 KIYMGEDEKKARKILESS 312
              +  D K AR   +  
Sbjct: 296 TQAIASDAKHARNYFKKK 313


>gi|328953955|ref|YP_004371289.1| riboflavin biosynthesis protein RibF [Desulfobacca acetoxidans DSM
           11109]
 gi|328454279|gb|AEB10108.1| riboflavin biosynthesis protein RibF [Desulfobacca acetoxidans DSM
           11109]
          Length = 324

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 13/323 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ ++ +   +       V+ IGNFDG+HLGH  +     + A   N    V++F+PH
Sbjct: 1   MVLYRDLNL---ITQPFSRPVITIGNFDGVHLGHQTLFGLVRERAAAVNGHSVVITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++Q    +  L+    + ++L ++    +I + FT E     A +FIQ  L+E L V
Sbjct: 58  PIKLMQPGRQLPLLTTTDQKIRLLGELNLDIVIVHPFTKEFGAMPAREFIQHYLLERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  +RFG +R G+  +LQ  G  +GF    +D ++ ++  IVSS+ IR  +  G 
Sbjct: 118 QEIVIGHDYRFGHNREGNIALLQTLGAAWGFPVHVVDAIQVDE-IIVSSTLIRNLIRDGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V  A   LG  + +  +VIHG   G   LGFPTAN++   ++L   G+YA+R     +T 
Sbjct: 177 VAAARTFLGRSYEVTGEVIHGHGRGARLLGFPTANIRADNELLPVAGIYAVRATLWGRT- 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+ VAN G  PT   N  L LE  I DF+Q+IYG    V F   LR E +F +I  L   
Sbjct: 236 YAAVANIGVCPTF-DNDELSLEVHILDFNQDIYGSHLAVEFVQRLRDERRFPNIPALVDQ 294

Query: 298 MGEDEKKARKILESSYPLSERDR 320
           +  D + AR+I+     L  RDR
Sbjct: 295 IKTDVEAARQIVR----LEGRDR 313


>gi|171913138|ref|ZP_02928608.1| riboflavin biosynthesis protein RibF [Verrucomicrobium spinosum DSM
           4136]
          Length = 310

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M    +I     L        +AIG FDG+HLGH  ++  A+     +     V++F+PH
Sbjct: 1   MRTHSSI---GDLRALRGPVALAIGVFDGVHLGHQEVIRAAMDHAATHQGTAVVMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L     + +ILE++G + ++  KFT + A   A QF+  +      +
Sbjct: 58  PLRVLRPESAPRLLCSTRHKLQILEQLGVTDVLICKFTPDFAKIDAAQFVGALSQSCQPL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  + FGK R G+   L + G ++GF    + E++ +    VSS+ IR A+    
Sbjct: 118 GFISVGYTWSFGKGRGGNIHQLMELGREFGFGVYGVPEVKLSDEV-VSSTLIREAVRAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG  +T+  +V+ G ++GRTLGFPTAN+++  + L   GVYA+R +       
Sbjct: 177 FSRAAELLGRPYTVLGEVVVGRQLGRTLGFPTANVRVENEELPPTGVYAVRVQLNG-RCL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           SGVAN G  PT+   G   LE  +FD S + YG +  V+F   LR E KF  +E LK  +
Sbjct: 236 SGVANLGFRPTVDSGGERSLEVHLFDQSGDFYGHQMEVAFVQKLRDERKFDGLEALKAQI 295

Query: 299 GEDEKKARKILES 311
             D  +AR +L++
Sbjct: 296 ALDATEARSVLQA 308


>gi|212213112|ref|YP_002304048.1| FMN adenylyltransferase [Coxiella burnetii CbuG_Q212]
 gi|212219169|ref|YP_002305956.1| FMN adenylyltransferase [Coxiella burnetii CbuK_Q154]
 gi|215918958|ref|NP_819430.2| FMN adenylyltransferase [Coxiella burnetii RSA 493]
 gi|206583843|gb|AAO89944.2| riboflavin kinase [Coxiella burnetii RSA 493]
 gi|212011522|gb|ACJ18903.1| riboflavin kinase [Coxiella burnetii CbuG_Q212]
 gi|212013431|gb|ACJ20811.1| riboflavin kinase [Coxiella burnetii CbuK_Q154]
          Length = 345

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +        +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P 
Sbjct: 26  MKLIRG---KHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKLPTVVIIFEPQ 82

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           L     +     +     L+  +F    A+ +AE F++++LV+ L  
Sbjct: 83  PKEFFAKGQTEARLMRFREKWLGFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGA 142

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G 
Sbjct: 143 KAVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGD 201

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY
Sbjct: 202 MAVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVRA-FLNKKSY 260

Query: 239 SGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   
Sbjct: 261 RGVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQ 320

Query: 298 MGEDEKKARKI 308
           M  D  +A K 
Sbjct: 321 MHRDVIEAEKY 331


>gi|326793615|ref|YP_004311435.1| riboflavin biosynthesis protein RibF [Marinomonas mediterranea
           MMB-1]
 gi|326544379|gb|ADZ89599.1| riboflavin biosynthesis protein RibF [Marinomonas mediterranea
           MMB-1]
          Length = 309

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I    ++ +  + GV+ IGNFDG+HLGH  IL +   +A    SP  V+ F P 
Sbjct: 1   MELIRGI---HNIRSKHQHGVLTIGNFDGVHLGHQTILSRVKSLAKQYQSPAGVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    ++    + ++L++ G   ++   F  +  N  A +F   +L E L +
Sbjct: 58  PREFFAPESAPGRITRMRDKIELLQQQGIDYVLCLPFNNKLRNLDASEFCNLILKEGLHI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG DR GD   L + GE   F       + +  ++ +SS+ +R  L  G 
Sbjct: 118 RHLVVGDDFRFGCDRQGDFEYLSRFGELSEFDVESTSSVLSQNNERISSTLVRQQLESGR 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
             +A   +G+   +   VI G+++GRT+GFPTAN+ L        GVYA+ F   D   Y
Sbjct: 178 FDDALRSMGHSLVMSGRVIGGKQLGRTIGFPTANVHLKGCEPALRGVYAVSFFV-DGQQY 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE  +FDF  ++Y +  +V F  ++RPE K   +++L+  +
Sbjct: 237 QGVANIGVRPTV-DGKYPLLEVHVFDFDGDLYHKYVSVEFNCFIRPERKMSGLDELEKQI 295

Query: 299 GEDEKKARKILES 311
             D+++A +   +
Sbjct: 296 QCDKEEALRFFRN 308


>gi|331006485|ref|ZP_08329786.1| Riboflavin kinase [gamma proteobacterium IMCC1989]
 gi|330419710|gb|EGG94075.1| Riboflavin kinase [gamma proteobacterium IMCC1989]
          Length = 320

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 3/305 (0%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ 64
           I    ++     G VV IG FDG+HLGH  IL+Q ++       P  V+ F P P     
Sbjct: 13  IRGLHNIRPKHHGNVVTIGAFDGVHLGHQAILQQVVEQARERQLPSLVMIFEPQPHEFFS 72

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     +   L   G   +    FT   +   A+ FIQ +L+E L  ++++ G
Sbjct: 73  GEKAPARLMRLREKITALFDSGIDRVFCLPFTHWLSQLPADDFIQHILIEHLGTQSLVIG 132

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F+FG+ R G+  +L+  GEK  F          +  + VSS+ IR  L      +   
Sbjct: 133 DDFQFGRQRQGNYALLKAAGEKADFAVTDTATYLVDDKR-VSSTRIREMLELAAFDSIDI 191

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  +TI   V+ G+++GR LG PTAN+ L        GV+ ++          GVAN 
Sbjct: 192 LLGKPYTISGKVVKGQQLGRELGAPTANVHLHRYRSPLSGVFVVKTLLDSGELLPGVANV 251

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+  +   +LE  +FD + ++YGQ  TV F   +R E +F  +E L+  + +D ++
Sbjct: 252 GVRPTVSGDTKPILEVHLFDRNDDLYGQIITVEFVHKIREEKRFDSLEHLREQIQKDIQQ 311

Query: 305 ARKIL 309
           AR+ L
Sbjct: 312 ARQWL 316


>gi|110637357|ref|YP_677564.1| bifunctional riboflavin kinase/FAD synthetase [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280038|gb|ABG58224.1| bifunctional protein: riboflavin kinase; FAD synthetase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 309

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 98/315 (31%), Positives = 169/315 (53%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ +I+  Q +       VV IG FDG+H+GH  IL +  ++++  N    +++F PH
Sbjct: 1   MKIYRDIKEFQPVN----KAVVTIGAFDGVHIGHKKILNRLTELSSLVNGESVLITFWPH 56

Query: 59  PRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR +++  + PI  L+    +  +L+      L+   F  E +  +A+ FI+ +L++ + 
Sbjct: 57  PRFVLKKDAEPIGLLNTLEEKIHLLDTYNIDHLLILNFNEEFSKLTADAFIENILIKSIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G   RFG +R G    L    E++   ++ I + +  +S  +SS+ IR AL  G
Sbjct: 117 TRYLVLGYDHRFGNNREGSIDYLNANKERFEIESIEIPK-QEIESLAISSTLIRKALLNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQ 235
               A   LGY + +   VI G K+GRT+GFPTAN+ +     ++ K GVYA+    +  
Sbjct: 176 DSTVANQNLGYPYLLRGFVIEGNKLGRTIGFPTANIFIEDQDKLIPKNGVYAVYAYIEG- 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ N G  PT+  +    +E  IFDF+Q+IYG+   +    Y+R E+KF  I+ L 
Sbjct: 235 ERYKGMLNIGVRPTINNDKRRTIEVHIFDFNQDIYGKTVRLELITYIRDEVKFSGIDTLI 294

Query: 296 IYMGEDEKKARKILE 310
           + + +DE + R IL+
Sbjct: 295 LQLKQDEIETRAILK 309


>gi|209364146|ref|YP_001425011.2| FMN adenylyltransferase [Coxiella burnetii Dugway 5J108-111]
 gi|207082079|gb|ABS77883.2| riboflavin kinase [Coxiella burnetii Dugway 5J108-111]
          Length = 345

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +        +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P 
Sbjct: 26  MKLIRG---KHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKIPTVVIIFEPQ 82

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           L     +     +     L+  +F    A+ +AE F++++LV+ L  
Sbjct: 83  PKEFFAKGQTEARLMRFREKWLGFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGA 142

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G 
Sbjct: 143 KAVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGD 201

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY
Sbjct: 202 MAVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVRA-FLNKKSY 260

Query: 239 SGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   
Sbjct: 261 RGVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQ 320

Query: 298 MGEDEKKARKI 308
           M  D  +A K 
Sbjct: 321 MHRDVIEAEKY 331


>gi|297537730|ref|YP_003673499.1| riboflavin biosynthesis protein RibF [Methylotenera sp. 301]
 gi|297257077|gb|ADI28922.1| riboflavin biosynthesis protein RibF [Methylotenera sp. 301]
          Length = 298

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 19/314 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +F +I   Q  P       +AIGNFDG+HLGH  +L++  + A   N    V++F PH
Sbjct: 1   MQIFRHIPAQQQQP-----CALAIGNFDGMHLGHQALLKKLNETAKALNLTSAVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    LS    + +   + G       +F    A  + ++F+Q +L + L  
Sbjct: 56  PREFFAPETAPARLSSLREKLEHFAEAGVETTYVCRFNRRLAKLTPQEFMQNILRDSLNA 115

Query: 119 KTVITGTKFRFGKDRAGDR-GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++ G  FRFG  RAG     L+ +     F+ + + ++ +     VSS+ +R+AL  G
Sbjct: 116 QAILVGDDFRFGAMRAGSILDFLEAK-----FNLISLPQV-DLDGARVSSTRVRSALATG 169

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A+ LLG  +++   V+HG K+GR LGFPTAN+ +  +     GVYA++    +   
Sbjct: 170 ALHEASVLLGRPYSMSGKVVHGAKLGRQLGFPTANVHMRHERPALTGVYAVKLDGMN--- 226

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VAN G  PT+     L+LE  + DF+ ++YGQ   V F   +R E KF  ++ LK  
Sbjct: 227 --SVANLGVRPTIAGVSKLMLEVNVLDFNADLYGQHVHVEFLHKIRDEQKFDGLDALKTQ 284

Query: 298 MGEDEKKARKILES 311
           +  D + AR   + 
Sbjct: 285 IALDVESARDFFKK 298


>gi|86140924|ref|ZP_01059483.1| putative riboflavin kinase [Leeuwenhoekiella blandensis MED217]
 gi|85832866|gb|EAQ51315.1| putative riboflavin kinase [Leeuwenhoekiella blandensis MED217]
          Length = 311

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 7/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           + LKG VV IG FDG+HLGH  I+++ +    +N+    VL+F PHPR ++Q  + I  +
Sbjct: 11  DGLKGTVVTIGTFDGVHLGHRKIIDRLLASAQSNDLESVVLTFFPHPRMVLQKDTGIKLI 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  +LE  G   LI + FT E +  +AE+F++ +LV+ L+ + VI G   RFG++
Sbjct: 71  NSIDERIALLEACGLDHLIIHPFTQEFSRLTAEEFVKDILVDQLKARKVIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  +   L+  GE+Y F    I + ++     VSS+ +R AL +G++  A   LGY F +
Sbjct: 131 RNANIDDLKAFGEQYDFEVEEISK-QDVDDVAVSSTKVRKALDEGNITLANEYLGYPFML 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V  G+ +G+   +PTAN+++  D  ++  +GVY ++    ++  Y G+ + G NPT+
Sbjct: 190 NGIVSRGKGLGKKFNYPTANLKIEEDYKLIPAKGVYVVQATLANERVY-GMMSIGTNPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                L +E+F FDF   +Y Q   +     +R E KF  +++L   M  DEK +R  ++
Sbjct: 249 -GGSDLTIETFFFDFDANLYDQHLQIELLTRIRDEKKFNSVDQLIAAMQADEKFSRDFIQ 307

Query: 311 S 311
            
Sbjct: 308 K 308


>gi|284035722|ref|YP_003385652.1| riboflavin biosynthesis protein RibF [Spirosoma linguale DSM 74]
 gi|283815015|gb|ADB36853.1| riboflavin biosynthesis protein RibF [Spirosoma linguale DSM 74]
          Length = 309

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 105/316 (33%), Positives = 178/316 (56%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++  ++  Q LPN     VV  G FDG+H GH +IL +  ++A        ++++ PH
Sbjct: 1   MIIYQGLDDIQPLPN----AVVTSGTFDGVHRGHQIILSRLTEVAQASGGESVLITYWPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PRT++ + S  +  L+    + ++L++ G   L+   FT   +  ++E++I+++L++ + 
Sbjct: 57  PRTVVSNDSQNLKLLTTLEEKIELLDQAGVEHLVVIPFTRSFSELTSEEYIRQILLDKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G   RFG+DR G    +Q    +YGF    I   ++ ++  VSSS IR AL +G
Sbjct: 117 TKKLVIGYDHRFGRDREGGFDYIQAHQSEYGFEVEEIPR-QDVEAVGVSSSKIRAALNEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
           +V  A   LG  + +   ++ G ++GRT+GFPTANMQ+     ++   GVYA+      Q
Sbjct: 176 NVHTANLFLGRPYNLTGTIVKGRQLGRTIGFPTANMQVDDPAKLIPANGVYAVDVEYAGQ 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T   G+ N G  PT+       +E++IFDF ++IYG+  T+ F ++LRPE KF+ +  L 
Sbjct: 236 T-LGGMLNIGFRPTVA-GTHQTIETYIFDFDKDIYGEHMTLRFREFLRPEQKFEGLPALV 293

Query: 296 IYMGEDEKKARKILES 311
             +  DE+ ARK+L S
Sbjct: 294 AQLKRDEEAARKVLGS 309


>gi|212639517|ref|YP_002316037.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Anoxybacillus flavithermus WK1]
 gi|212560997|gb|ACJ34052.1| FAD synthase [Anoxybacillus flavithermus WK1]
          Length = 326

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 11/326 (3%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNP 57
           M +   I ++  L   +    V+A+G FDG+HLGH  +++ A +I         V++F+P
Sbjct: 1   MKIMKTIWLSHPLNQKNDDPLVMALGYFDGVHLGHQKVIQTAKQIADDRQYKSAVMTFHP 60

Query: 58  HPRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HP  ++ +S   +  ++P   +EK + K+G   L    FT E A    +QF+ + ++  L
Sbjct: 61  HPSVVLGRSKQHVRFITPLKEKEKQIAKLGVDNLYVVPFTPEFAQLLPQQFVDEYII-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            VK V+ G  F +G+   G    L     +    TV     +    + +SS+ IR  L +
Sbjct: 120 GVKHVVAGFDFTYGRLGKGTMETLPFHSREQFTQTVI--PKQTFGEEKISSTYIRQRLAE 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ 235
           G V    HLLG  + +   V+HG+K GRT+GFPTAN+ L  D I+ + GVYA+       
Sbjct: 178 GDVEQLPHLLGRLYEVTGTVVHGDKRGRTIGFPTANVALDDDYIIPRIGVYAVTVTI-GA 236

Query: 236 TSYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +++GV N G  PT     P    +E  +FDFS +IYG    + +   LR E  F  + +
Sbjct: 237 KTWTGVCNVGYKPTFHAQQPEEPTIEVHLFDFSADIYGANVRIQWHKRLRDERAFSSVHE 296

Query: 294 LKIYMGEDEKKARKILESSYPLSERD 319
           L   +  D + AR+  ++      ++
Sbjct: 297 LIEQIQRDVQAAREYFQNPLAFYRKN 322


>gi|149913704|ref|ZP_01902237.1| riboflavin biosynthesis protein RibF [Roseobacter sp. AzwK-3b]
 gi|149812824|gb|EDM72653.1| riboflavin biosynthesis protein RibF [Roseobacter sp. AzwK-3b]
          Length = 312

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 165/314 (52%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  + +    +    +G  VAIGNFDG+HLGH  +++ A + A    +P+ VL+F PH
Sbjct: 1   MQIVRDYDY---VDQADRGASVAIGNFDGVHLGHQSVIDIAREHAADLGAPLGVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     +   L+K+G   L    F    A  S  +F + V+   L +
Sbjct: 58  PREYFAPDAPPFRLMSREARAHRLQKLGIEKLYELNFNAAMAALSPYEFARTVIARGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FGK RAGD   L++ G + GF    I EL   ++  VSS+ IR AL++G 
Sbjct: 118 RHVVVGADFCFGKGRAGDARDLERFGREMGFGVT-IAELLEGRTGQVSSTAIRAALSEGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   I+  V+ GE+ GR LG+PTANM +      + GVYA+    +D    
Sbjct: 177 PRDAAAMLGHWHRIDGPVVGGEQRGRELGYPTANMSIEGLHPPRFGVYAVLVEVRDGPHA 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P      P  LE+FIFDFS ++YG   +V+  +YLRPE  F  +E   
Sbjct: 237 GQYHGAASLGVRPMFHGEVP-NLETFIFDFSGDLYGAELSVALVEYLRPEATFDSLEAFI 295

Query: 296 IYMGEDEKKARKIL 309
             M  D  +AR IL
Sbjct: 296 AQMDADCARARDIL 309


>gi|284929070|ref|YP_003421592.1| FMN adenylyltransferase /riboflavin kinase [cyanobacterium UCYN-A]
 gi|284809529|gb|ADB95234.1| FMN adenylyltransferase /riboflavin kinase [cyanobacterium UCYN-A]
          Length = 314

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 9/310 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
            + I  S+ N      VA+GNFDGIHLGH  +L+  +K A     TV++F PHP+     
Sbjct: 7   GVWIPSSIDNAKTPTAVALGNFDGIHLGHRQVLKPILKFAKQYVPTVVTFEPHPQEFFTG 66

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            +    L+P   + +IL  +    LIR  F  + A+ S  +FI  +LV  L V+ +  G 
Sbjct: 67  ETR-QLLTPIDEKVQILNSLNIKQLIRLPFNQDLASLSPLEFIIDILVGKLNVRYISVGE 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQI---VSSSNIRTALTKGHVL 180
            F FG  + G   +L+   E++G     I  +    +  +    +SSS IR  L  G + 
Sbjct: 126 NFYFGHKKTGTVELLRDFTERFGISVNTIRLETFLTSDKKNPLRISSSKIREYLADGSIA 185

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS 239
               +LGY + +   VI G++IGRT+GFPTAN++L    +L   GVY +    +++    
Sbjct: 186 EVNQMLGYSYFLRGIVISGQQIGRTIGFPTANLKLPTNKLLPCNGVYCVYVEFENKDIIK 245

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GV N G+ PT+  +G L +E  + D+S  +YG++ TV    +LR E KF  ++ L+  + 
Sbjct: 246 GVMNVGKRPTI--DGSLTVEVHLLDWSGNLYGKKLTVYLEKFLRYETKFPSLQALRNQIE 303

Query: 300 EDEKKARKIL 309
           +D KKAR IL
Sbjct: 304 QDCKKARSIL 313


>gi|94676756|ref|YP_588984.1| riboflavin biosynthesis protein RibF [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|94219906|gb|ABF14065.1| riboflavin biosynthesis protein RibF [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 327

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 142/314 (45%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG H GH  ++ +          P  V+ F P 
Sbjct: 1   MELIRGI---HNLQQRHHGCVLTIGNFDGFHRGHQALINKLQTEGRRRRLPAIVIIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     +     L+    + K L   G  A++   F    +N SA+ F+  +LV  L  
Sbjct: 58  PQEYFAGTKAQVRLTRFRDKVKYLATAGVDAILCITFNKYFSNLSAKTFLFDILVHKLGG 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK R G+  +L+    + GF  + I        Q +SS+ IR AL +  
Sbjct: 118 RLICVGDDFCFGKCRQGNLTMLKHASNQVGFDIINIMTYNTEDGQRISSTAIRQALVQDR 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   VI+G+ +GR +GFPTAN+ L   +    GVYA++     +   
Sbjct: 178 LDEAEMLLGHLYRISGRVIYGDALGRIIGFPTANISLKGRLAPLNGVYAVQVYGITKDPL 237

Query: 239 SGVANFGRNPTMV--PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            G+AN G  PT+    +    +E  + D +  +YG    V     +R E +F  +E+LK 
Sbjct: 238 PGIANIGTRPTVTNYSHNQQHMEVHLLDVTLNLYGYHLEVIILAKIRKEQRFASLEELKQ 297

Query: 297 YMGEDEKKARKILE 310
            +  D    R   +
Sbjct: 298 QIVNDIANVRNYFK 311


>gi|254460594|ref|ZP_05074010.1| riboflavin biosynthesis protein RibF [Rhodobacterales bacterium
           HTCC2083]
 gi|206677183|gb|EDZ41670.1| riboflavin biosynthesis protein RibF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 312

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 123/316 (38%), Positives = 168/316 (53%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +      + +  +G   AIGNFDG+HLGH  ++E A K      +P  VL+F+PH
Sbjct: 1   MRIIRDYTY---VNDQDRGASAAIGNFDGVHLGHRAVIEIARKAGEKAGAPCGVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     ++  F L  P+ +   L K+G   L +  F    A  S E+F  +V+ E   +
Sbjct: 58  PRQYFAPNADPFRLMGPAAKATELAKIGVERLYQLNFNAALAALSPEEFATRVIHEGFGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FGKDR G    LQ  GEK GF    I EL       VSS++IR AL KG 
Sbjct: 118 QHVVVGADFCFGKDRVGKAADLQGFGEKLGFGVT-IAELIEGTQGQVSSTSIRQALAKGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   IE  VI GE+ GR LG+PTANM +      + GVYA+    QD    
Sbjct: 177 PRDAADMLGHWHRIEGIVIGGEQRGRELGYPTANMSIEGLHPPRFGVYAVLVEVQDGPHV 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y GVA+ G  P    N P  LE+F+FDF+ ++YG   +V+  DYLRPE KF  ++ L 
Sbjct: 237 GKYHGVASMGVRPMFGINRP-NLETFLFDFTGDLYGATLSVALVDYLRPEEKFDGLDALI 295

Query: 296 IYMGEDEKKARKILES 311
             M  D  K+R IL +
Sbjct: 296 TQMDADSAKSRAILAA 311


>gi|5932380|gb|AAD56933.1|AF180145_25 riboflavin kinase ribF [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 313

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 110/303 (36%), Positives = 158/303 (52%), Gaps = 3/303 (0%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSP 68
           +  +P+HL G +VA+GNFDG HLGH  ++         + P+ V +F+PHP        P
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAHGSPWPCRSRPVIVATFDPHPVRFFCPDLP 66

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L    V+TG  F 
Sbjct: 67  PFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLTAAGVVTGRDFT 126

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G   +LQ  G+        I  + + +   +SS+ IR AL +G    AA +L  
Sbjct: 127 FGKGRKGGVDLLQAMGQNLNISVDTIMPVCDQQG-AISSTRIREALKQGDPETAARVLSR 185

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  P
Sbjct: 186 PFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIRP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR  
Sbjct: 246 SFSPPTEW-LEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARAC 304

Query: 309 LES 311
           L  
Sbjct: 305 LSE 307


>gi|254418457|ref|ZP_05032181.1| riboflavin biosynthesis protein RibF [Brevundimonas sp. BAL3]
 gi|196184634|gb|EDX79610.1| riboflavin biosynthesis protein RibF [Brevundimonas sp. BAL3]
          Length = 309

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 114/313 (36%), Positives = 157/313 (50%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +      LPN L+G  VA+G FDG+H GH  ++  A   A    +P+ V+SF+PH
Sbjct: 1   MQIVRDWR---DLPNALRGAAVAVGAFDGVHRGHQAVIAGAKAAAERLGAPLGVVSFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q  +  F L       + L  +G   L    F  E A  S   F +KVL   L V
Sbjct: 58  PRRWFQPEAAPFRLMTADQMAQALAPLGVDILYLLPFDGEMAGMSDADFAEKVLARGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +    G  F FGK R+G    L+  GE+ GF     + L +     +SSS +R AL  G 
Sbjct: 118 RHAAVGFDFTFGKGRSGSPEALKTYGERLGFTVSVAERLDDADGLKLSSSAVREALKAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA +LG  F ++ +VIHG+K GRT+G PTAN+ L   +    GVYA R R  D    
Sbjct: 178 MDRAAAILGRPFALQGEVIHGDKRGRTIGVPTANIALGDYMRPAYGVYATRSRLADGRVV 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVA+ G  P      P LLE ++FDF  ++YGQ        +LR E  F  +  LK  +
Sbjct: 238 NGVASLGVRPMYALETP-LLEVWLFDFDSDLYGQVIETELVAWLRGEESFDGLGALKAQI 296

Query: 299 GEDEKKARKILES 311
            +D   AR+IL S
Sbjct: 297 DKDADAARRILAS 309


>gi|315225627|ref|ZP_07867436.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea
           F0287]
 gi|314944444|gb|EFS96484.1| riboflavin biosynthesis protein RibF [Capnocytophaga ochracea
           F0287]
          Length = 308

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/297 (36%), Positives = 172/297 (57%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  I+E+ +  A    +  T+ +F PHPR ++Q    +  +   
Sbjct: 14  QPTVLTIGTFDGVHLGHQKIIERVVTTARQEGLLATIFTFFPHPRMVVQHDKSLKLIHTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++++L+++G   L+   F    A  +AE+F+  +LV+ L VK VI G   RFG++R  
Sbjct: 74  EEKKQLLQQLGVDLLVVQPFNEAFAQLTAEEFVSTILVQHLNVKKVIIGYDHRFGRNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   ++  GEKYGF    I  ++      VSS+ IR AL KG V+ A H LG  +++   
Sbjct: 134 NISDMRLFGEKYGFAVEEI-SVQEVDEVSVSSTKIREALNKGDVITAEHYLGTPYSLTGT 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG K+GRTLG+PTAN+Q++ D  ++ K+GVYA+      +  Y G+ + G+NPT+   
Sbjct: 193 VVHGLKLGRTLGYPTANIQVTEDYKLIPKDGVYAVYSYIGARKVY-GMMSIGKNPTIEGK 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G   +E + FDF+ ++Y +  T+ F  YLR E KF  +  LK  + +DE  ARK + 
Sbjct: 252 G-ASIEVYFFDFNGDLYDRELTIYFVKYLREERKFSSVALLKKQLRDDETTARKAIA 307


>gi|153207903|ref|ZP_01946480.1| riboflavin biosynthesis protein RibF [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161831021|ref|YP_001596334.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 331]
 gi|165918822|ref|ZP_02218908.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 334]
 gi|120576329|gb|EAX32953.1| riboflavin biosynthesis protein RibF [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161762888|gb|ABX78530.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 331]
 gi|165917454|gb|EDR36058.1| riboflavin biosynthesis protein RibF [Coxiella burnetii RSA 334]
          Length = 320

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +        +L   L G V  +GNFDG+HLGH  +L+   ++A     P  V+ F P 
Sbjct: 1   MKLIRG---KHNLLTPLNGCVATLGNFDGLHLGHQALLKTLKQLARELKLPTVVIIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           L     +     +     L+  +F    A+ +AE F++++LV+ L  
Sbjct: 58  PKEFFAKGQTEARLMRFREKWLGFAEWKIDYLLCLRFDRALADLAAEDFVKQILVDRLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R AL  G 
Sbjct: 118 KAVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQALQAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    ++ SY
Sbjct: 177 MAVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVRA-FLNKKSY 235

Query: 239 SGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GVA+ G  PT    N  LLLE ++FDFS+ IYG    V F   LR E++F  I  L   
Sbjct: 236 RGVASLGVRPTFKDENARLLLEVYLFDFSKTIYGCYLEVEFLHKLREEVRFDSISALIEQ 295

Query: 298 MGEDEKKARKI 308
           M  D  +A K 
Sbjct: 296 MHRDVIEAEKY 306


>gi|322513919|ref|ZP_08066996.1| riboflavin biosynthesis protein RibF [Actinobacillus ureae ATCC
           25976]
 gi|322120254|gb|EFX92207.1| riboflavin biosynthesis protein RibF [Actinobacillus ureae ATCC
           25976]
          Length = 320

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 167/320 (52%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +        +     KG V+ IGNFDG+H+GH  IL +     +  N P  V+ F P 
Sbjct: 1   MQLIRGFHNLANFHALQKGCVLTIGNFDGVHIGHQNILARLCDKSLELNLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           PR      S           L     + K LE+ G   ++  +F+ + A  SA+ FI ++
Sbjct: 61  PREFFAKKSANLTASSAPARLMRLRDKLKYLEEAGIDFVLCVRFSDKFAQLSADAFISEL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           LV+ L+V+ +  G  FRFG+ RAG+  +L   G KY F         +   + +SSS IR
Sbjct: 121 LVKRLQVRYLSIGDDFRFGEKRAGNFEMLHNAGLKYRFAVEE-SHTHSFNCERISSSLIR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            AL + ++     LLG  ++I   V HG K+GRT+GFPTAN+ L+  ++  +GV+A++ +
Sbjct: 180 QALQQDNLHLVEKLLGRPYSIAGRVAHGNKLGRTIGFPTANIMLNRLVIPLQGVFAVQIQ 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           T+    Y+G+AN G  PT+      LLE  IFDF++ IYG+   V F   +R E+KF   
Sbjct: 240 TK-TGKYNGIANVGNRPTIN-GSKALLEVHIFDFNRSIYGEAIEVFFMHKIRNEVKFPSF 297

Query: 292 EKLKIYMGEDEKKARKILES 311
           E LK  + +D ++A +  + 
Sbjct: 298 EALKAQIEKDRQQAVEFFKE 317


>gi|268316871|ref|YP_003290590.1| riboflavin biosynthesis protein RibF [Rhodothermus marinus DSM
           4252]
 gi|262334405|gb|ACY48202.1| riboflavin biosynthesis protein RibF [Rhodothermus marinus DSM
           4252]
          Length = 312

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 103/304 (33%), Positives = 161/304 (52%), Gaps = 9/304 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
            H    VV +G FDG+H GH  +L+   A     N   TVLSF+PHPR +++ + P+  L
Sbjct: 11  AHDARSVVTVGTFDGVHRGHQAVLQFLMARARERNGVSTVLSFDPHPREVLR-AEPVSLL 69

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  +LE +G    I   FT E A   A QF++++LV  + ++ +  G    FG++
Sbjct: 70  TTIEERATLLEALGIERFIVLSFTPELAAMPARQFVEEILVRRIGLQAICVGYDHTFGRN 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFT 191
           R G+  +LQ+ G +YGF    I   +    + VSS+ IRT  L  G V  AA LLG  + 
Sbjct: 130 REGNVALLQQLGSQYGFAVDVIPP-QVVGDRTVSSTLIRTILLRDGDVRQAAELLGRPYM 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNP 248
           +++ V+ G+  GR LGFPTAN+       ++ + GVYA+R     +     G+ N G  P
Sbjct: 189 LQATVVKGDGRGRVLGFPTANLHPSHPRKLVPRNGVYAVRVWLPGEAEPRGGMMNIGMRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T   +    LE  + DF  ++YGQ   V F + LR E +F  IE L+  +  D ++  ++
Sbjct: 249 TFAGD-RRTLEVHLLDFEGDLYGQVLRVDFIERLRDERRFPSIEALREQLFRDRQRCMEV 307

Query: 309 LESS 312
           L++S
Sbjct: 308 LQAS 311


>gi|218528501|ref|YP_002419317.1| riboflavin biosynthesis protein RibF [Methylobacterium
           chloromethanicum CM4]
 gi|218520804|gb|ACK81389.1| riboflavin biosynthesis protein RibF [Methylobacterium
           chloromethanicum CM4]
          Length = 337

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/289 (37%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT   +G  LLE  +FD
Sbjct: 225 TLGYPTANLALES-CGLAHGIYAVRVRLADGSLHDGVASYGRRPTF-DDGAPLLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +  
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRTDR 331


>gi|269795636|ref|YP_003315091.1| FMN adenylyltransferase /riboflavin kinase [Sanguibacter keddieii
           DSM 10542]
 gi|269097821|gb|ACZ22257.1| FMN adenylyltransferase /riboflavin kinase [Sanguibacter keddieii
           DSM 10542]
          Length = 329

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 11/324 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++ +++    +P  +   VV IGNFDG+H GH  +L + ++ A         ++F+PH
Sbjct: 1   MQLWTDLD---QIPAGVGPSVVTIGNFDGVHAGHVEVLGRLVQRAAELEAVSVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       ++    +  +LE+ G  A++   ++L  A  + E+F+ + +V+ L  
Sbjct: 58  PAQVHRPDEAPPLITGLQDRLLLLEETGIDAVLVLPYSLALAGLTPEEFVSRYIVDALGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G   RFG   +G    +   GE+YGF    I ++ +  +   SSS +R  L  G 
Sbjct: 118 VCVAVGRDVRFGLGNSGSLETMVSLGERYGFVVDVIQDVGDGPAPRWSSSAVRELLLAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT---QD 234
           V  AA +LG    +  +V+HG+  GR LGFPTAN+      I+  +GVYA   R     D
Sbjct: 178 VAGAAQILGRPHRLRGEVVHGDARGRDLGFPTANLSQDAQGIVPADGVYAGWVRRPTSAD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            T      + G NPT        +E+++ D    ++YG+   V   + LRP ++F  ++ 
Sbjct: 238 PTPLPAAISIGTNPTF-DGLQRRVEAYVLDRTDLDLYGEEILVELVERLRPTLRFDGLDA 296

Query: 294 LKIYMGEDEKKARKILESSYPLSE 317
           L   M  D  +AR IL    P ++
Sbjct: 297 LVEQMTADVVQARDILLPVAPATD 320


>gi|288921721|ref|ZP_06415988.1| riboflavin biosynthesis protein RibF [Frankia sp. EUN1f]
 gi|288346893|gb|EFC81203.1| riboflavin biosynthesis protein RibF [Frankia sp. EUN1f]
          Length = 309

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 106/309 (34%), Positives = 164/309 (53%), Gaps = 9/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +  +E   + P    GGVV IG FDG+HLGH  I+ +A+++A       TVL+F+PH
Sbjct: 1   MRRWRGVE---NTPEDWPGGVVTIGFFDGVHLGHRRIVGRAVELARQRGQRSTVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+    + ++L  +G  AL    FTLE +   AE+F+++VLV  L  
Sbjct: 58  PAEVLRPGTHPAQLTTLRYKAELLAAIGVDALCVAPFTLEFSRIPAEEFVRQVLVGRLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  F +G   AG+   L + G   GF    I  +R ++   +SS+ IR  +  G 
Sbjct: 118 TTVVVGENFTYGHRAAGNVESLARDGRAEGFEVEGIGLVRADEKV-LSSTEIRRRVAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG    +E  V+HG+  GRT+G+PTAN+Q +P   +  +GVYA      DQ  
Sbjct: 177 VEGAAAALGRPHRVEGVVVHGDARGRTIGYPTANLQCAPWSAIPDDGVYAGFASWSDQRR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +   + G NPT        +E+F+ DF  ++YG+  T  F   LRP ++F  +++L   
Sbjct: 237 -AAAISIGTNPTF-EGRDRRVEAFLLDFDGDLYGEYMTYEFTRRLRPTLRFDSVDELVEQ 294

Query: 298 MGEDEKKAR 306
           MG D  + R
Sbjct: 295 MGRDVDETR 303


>gi|54293911|ref|YP_126326.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Lens]
 gi|53753743|emb|CAH15201.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Lens]
          Length = 328

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 5/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKTLRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A  SA  F Q  L E L+++ ++ G  FRFGK R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTSALYFAQFYLFEALKIRYLLVGQDFRFGKSREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+  G  Y        +    +++ +SS+ IR AL +G++  AA LLG  +++   
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLI-ENEKISSTRIREALQQGNLRFAAKLLGRPYSMCGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT+     
Sbjct: 194 VIKGDGRGRQWGIPTANIGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPTVAGTKN 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++  
Sbjct: 253 I-LEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLKQNWLD 311

Query: 316 SERD 319
           S  D
Sbjct: 312 SVID 315


>gi|188579758|ref|YP_001923203.1| riboflavin biosynthesis protein RibF [Methylobacterium populi
           BJ001]
 gi|179343256|gb|ACB78668.1| riboflavin biosynthesis protein RibF [Methylobacterium populi
           BJ001]
          Length = 337

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 109/289 (37%), Positives = 154/289 (53%), Gaps = 3/289 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A   P  VL+F PHPR     + P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGPRPAVVLTFEPHPRAFFAPNQPMFRLTGPSAKETVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F  E A  SA+ F++  L + L +  V+ G  F FG+ R G  G L     
Sbjct: 105 GLDGLIVRRFDAELAGTSAQDFVEGWLRDRLGLSGVVIGHDFHFGRGREGSPGTLAALCA 164

Query: 146 KYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLTCRIVPAVSADPGDAPISSSAIRAALASGDVARANALLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT   +G  LLE  +FD
Sbjct: 225 TLGYPTANLALES-CGLAHGIYAVRVRLADGSLHDGVASYGRRPTF-DDGAPLLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++YGQ   V    YLR E +F   E L   M  D  +AR  +++  
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEERFSSAEALVTQMDVDSARARAAIQADR 331


>gi|163849870|ref|YP_001637913.1| riboflavin biosynthesis protein RibF [Methylobacterium extorquens
           PA1]
 gi|163661475|gb|ABY28842.1| riboflavin biosynthesis protein RibF [Methylobacterium extorquens
           PA1]
          Length = 355

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 108/289 (37%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 63  NFDGVHRGHRTLIEAVRTEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 122

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 123 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 182

Query: 146 KYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 183 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 242

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT   +G  LLE  +FD
Sbjct: 243 TLGYPTANLALES-CGLAHGIYAVRVRLADGSLHDGVASYGRRPTF-DDGAPLLEVHLFD 300

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +  
Sbjct: 301 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRTDR 349


>gi|297156806|gb|ADI06518.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces bingchenggensis BCW-1]
          Length = 327

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH +I+ + +  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQVIISRTVARARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  S   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAGLGVDAVLILPFTAEFSRLSPGDFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AG+   LQ+ G  Y +    +D  +       +  SS+ +R  + 
Sbjct: 118 RAVVEGPNFRFGHKAAGNVAFLQELGTTYDYEVEVVDLYQRGAAGGGEPFSSTLVRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q 
Sbjct: 178 EGDVAGAMEVLGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPADGVYAGWLTAQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  YLR +  F  IE 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAYLRGQETFSSIEA 295

Query: 294 LKIYMGEDEKKARKILESS 312
           L   M  D K+AR+++E++
Sbjct: 296 LLERMAVDVKRARELVEAA 314


>gi|119505894|ref|ZP_01627958.1| hypothetical protein MGP2080_07469 [marine gamma proteobacterium
           HTCC2080]
 gi|119458275|gb|EAW39386.1| hypothetical protein MGP2080_07469 [marine gamma proteobacterium
           HTCC2080]
          Length = 313

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 149/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +   +    +L +  +G  V +G FDGIHLGH  +L          +   TV+ F P 
Sbjct: 1   MDLIRGL---HNLRSEHRGCAVTVGAFDGIHLGHQAVLTHLSSCARDRDLLSTVIVFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   +       ++    +  +L + G   ++  KF  E    SAE F+ +V VE L  
Sbjct: 58  PREYFRPLEAPPRITNFRERLALLARTGIDRVLVLKFNEELRGMSAEDFVSRVFVEGLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD   +++   K+ +       L     + VSS+ IRTAL  G 
Sbjct: 118 RYIALGDDFRFGNSREGDYDYVRRLAAKFNYEVQPTGTLEIADIR-VSSTRIRTALADGQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
            + A  LLG  FT+   V HG K+GR LG PTAN++++       GV+A+R       + 
Sbjct: 177 FVEAQALLGRPFTMTGRVEHGRKLGRELGAPTANIRINRIRSPLSGVFAVRVDGPGLEAV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           + VAN G  PT+       LE  + D   ++YGQR  V F   LR EIK++ ++ LK  +
Sbjct: 237 AAVANVGTRPTVDDGLKANLEVHLLDRKCDLYGQRLEVRFLHKLREEIKYESLDALKEGI 296

Query: 299 GEDEKKARKILES 311
            +D   AR  L  
Sbjct: 297 AKDIDNARHWLAQ 309


>gi|29829088|ref|NP_823722.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces avermitilis MA-4680]
 gi|29606194|dbj|BAC70257.1| putative riboflavin kinase [Streptomyces avermitilis MA-4680]
          Length = 317

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 156/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVERARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  AL+   FT E +  S  +F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDALLILPFTTEFSRLSPAEFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AG+   L ++G+ Y F    +D             SS+  R  + 
Sbjct: 118 RAVVEGPNFRFGHKAAGNVEFLAEQGKTYDFEVELVDLYVTGEAGGGTPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVEGAREILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHVGD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  ++R + KF  I+ 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQAKFDSIDA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M  D K+ R+++ +
Sbjct: 296 LLETMAVDVKRCRELIAA 313


>gi|242280393|ref|YP_002992522.1| riboflavin biosynthesis protein RibF [Desulfovibrio salexigens DSM
           2638]
 gi|242123287|gb|ACS80983.1| riboflavin biosynthesis protein RibF [Desulfovibrio salexigens DSM
           2638]
          Length = 327

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 111/320 (34%), Positives = 178/320 (55%), Gaps = 11/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +I+    +    +G  V IGNFDG+H GH  ++    K A        V++F+PH
Sbjct: 1   MIIAKSID---EIIKPEQGACVTIGNFDGVHKGHQKLISSTCKKARANGLASVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ +S     ++  S + +++       ++   FT E A  S E+FIQ+ L+E L +
Sbjct: 58  PLRVLVNSKTPPFITLTSQKLELIALHKPDIILALNFTKEMAALSPEEFIQRYLIEPLGM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  +  GK R+G+   + K G+K+ +    +D +  N +  VSSS IR  +++G+
Sbjct: 118 KEMVVGYDYALGKGRSGNYETIVKLGQKHEYGVERLDPVIINDAV-VSSSRIRDMVSEGN 176

Query: 179 VLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           V +   LLG  + +  +V+H   + GR LGFPTAN++L  ++  K+GVYAIR   +    
Sbjct: 177 VWDVRPLLGRFYQVRGEVVHGMNRGGRLLGFPTANIKLEDELFPKKGVYAIRVEVEG-KV 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G+NPT   N  L +E+ I DFS++IYG+   V F   +R E KF  +++LK  
Sbjct: 236 LPGVANIGKNPTF-GNEALSVEAHILDFSKDIYGKDIRVHFIQRIRSEKKFNGLDELKER 294

Query: 298 MGEDEKKARKILESSYPLSE 317
           +G D   AR+IL  SYP S+
Sbjct: 295 IGIDIGLAREIL--SYPESQ 312


>gi|295691025|ref|YP_003594718.1| riboflavin biosynthesis protein RibF [Caulobacter segnis ATCC
           21756]
 gi|295432928|gb|ADG12100.1| riboflavin biosynthesis protein RibF [Caulobacter segnis ATCC
           21756]
          Length = 318

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 114/318 (35%), Positives = 175/318 (55%), Gaps = 8/318 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPR 60
           +   I+  + LP   +G  VA+GNFDG+H GH  ++ QA K A    +P+ V+SF+PHPR
Sbjct: 2   LLKTIQAWKDLPPEARGASVALGNFDGVHRGHQQVIAQAAKAALAGQTPLGVVSFDPHPR 61

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            + + S P F L     Q + L  +G        F  E A++   +F++KVLVE L VK 
Sbjct: 62  RLFRPSEPAFKLMTHGQQARALAGLGVDVFYLLPFDFEMASFGDREFVEKVLVEGLGVKH 121

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-----NKSQIVSSSNIRTALT 175
           V  G    FG+ R+G   +++  G++YGF     + + +        +  SS+ +R AL 
Sbjct: 122 VAVGFDISFGRGRSGSAELMKAYGDEYGFTVSVAEPVADTSKEGGDGEKFSSTGVRDALR 181

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            GH   AA +LG  F IE  V  G+++GR LGFPTAN+++   ++ + GVYA R R  D 
Sbjct: 182 DGHPEQAARILGRPFAIEGVVRRGQQLGRQLGFPTANVEVEDYVVPRLGVYATRTRLPDG 241

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G NPT        LE+++FDF +++YGQ        +LRPE+KF  ++ + 
Sbjct: 242 REVPGVANLGNNPT-TGIVETRLETWLFDFDEDLYGQIIETDLIAFLRPELKFDSLDLMI 300

Query: 296 IYMGEDEKKARKILESSY 313
             +  DE++AR I+  ++
Sbjct: 301 EQIHRDEQQARAIVAPAF 318


>gi|325672782|ref|ZP_08152478.1| riboflavin biosynthesis protein RibF [Rhodococcus equi ATCC 33707]
 gi|325556659|gb|EGD26325.1| riboflavin biosynthesis protein RibF [Rhodococcus equi ATCC 33707]
          Length = 314

 Score =  322 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIF 70
           +P      V+ IG FDG+H GH  ++ +A+  A     P  +++F+PHP  +++  S   
Sbjct: 1   MPADWGRCVLTIGVFDGVHRGHAQLISRAVDAARERGIPSVLMTFDPHPAEVVRPGSHPA 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + ++ E++G        FT E    S E+++ ++LVE L V  V+ G  F FG
Sbjct: 61  QLTTLPRRAELAEELGIDVFCVMPFTTEFMKLSPERYVHEILVERLHVSEVVVGENFTFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           +  AG+  +L++ G ++GF    ++ L    +   SS+ IR+ +  G V  AA  LG   
Sbjct: 121 RKAAGNVDLLRRTGARFGFAVDGVN-LLAEHAVTFSSTYIRSCVDAGDVAAAAEALGRPH 179

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ----------TSYS 239
            +E  V+HG+  GR LGFPTAN+       +  +GVYA  F                 Y+
Sbjct: 180 RVEGVVVHGDGRGRGLGFPTANIAPPMYSAIPADGVYAAWFTVLGPGPVEGTVEPGKRYA 239

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
              + G NPT        +E+F+ D   ++YGQ   V F   +R   KF  +E L   MG
Sbjct: 240 AAVSVGTNPTF-SGRTRTVEAFVLDREADLYGQHVAVDFVQRVRGMEKFDSVEALIEEMG 298

Query: 300 EDEKKARKILESS 312
            D +KAR IL  +
Sbjct: 299 RDAEKARAILAEA 311


>gi|329936648|ref|ZP_08286355.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseoaurantiacus M045]
 gi|329303878|gb|EGG47761.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseoaurantiacus M045]
          Length = 317

 Score =  322 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVERARELGVPTVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  A++   FT E +  S   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDAVLVLPFTKEFSKLSPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+   L ++G  Y F    +D          +  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHKAAGNVAFLTEQGRTYDFEVEVVDLYVRGEAGGGEPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G +  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA       
Sbjct: 178 EGDMTGAREILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHV-G 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
           + +     + G NP         +E++  D    ++YG    V F  Y+R +  F  +E 
Sbjct: 237 EEAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFQSYVRGQATFDSLEA 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   M +D    R++L
Sbjct: 296 LMAQMAQDVDHCRRLL 311


>gi|53803701|ref|YP_114670.1| riboflavin biosynthesis protein RibF [Methylococcus capsulatus str.
           Bath]
 gi|53757462|gb|AAU91753.1| riboflavin biosynthesis protein RibF [Methylococcus capsulatus str.
           Bath]
          Length = 309

 Score =  322 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 7/303 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V H +      P      V +IGNFDG+HLGH  ++ +  +  +    P+ ++ F P 
Sbjct: 1   MRVIHGLSGTICPPA----CVASIGNFDGVHLGHQTLVRRLTEQGHRLGLPVALVLFEPQ 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L   S +   L ++    ++  +F  + A  +   F++++L E L V
Sbjct: 57  PREFFDQDQSPPRLMRLSEKLTRLAELPVDWVLLLRFDEKLATLAPADFVRRILAERLHV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  FRFG+ R+GD  +L + G  +GF     + +       VSS+ +R AL +G 
Sbjct: 117 RHLIVGDDFRFGRGRSGDYELLCRLGRLHGFAVSDTESV-TVGGIRVSSTRVREALGRGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA LLG  + +   V+HG+++GR LGFPTAN++L  + +  +GV+A+         +
Sbjct: 176 MAGAATLLGRPYALRGRVVHGDQLGRRLGFPTANIELGRENIPVQGVFAVTMSGISAEPW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +   +LE+ +FDF+ ++YG+R  +     LR E++F ++E+LK  +
Sbjct: 236 PGVANIGIRPTVGGHRKAMLETHLFDFAGDLYGRRVEIHLHYKLRDEMRFANLEELKEQI 295

Query: 299 GED 301
             D
Sbjct: 296 ACD 298


>gi|304393176|ref|ZP_07375104.1| riboflavin biosynthesis protein RibF [Ahrensia sp. R2A130]
 gi|303294183|gb|EFL88555.1| riboflavin biosynthesis protein RibF [Ahrensia sp. R2A130]
          Length = 328

 Score =  322 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 188/326 (57%), Gaps = 4/326 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  F    + +++P+ L GGVVAIGNFDG+H GH ++L +A+  A     P   LSF PH
Sbjct: 1   MSAFQLHNLTENVPDSLAGGVVAIGNFDGVHRGHQVVLGRALNEARKAGVPALALSFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +  SP+F L+    +  I+E  G   L+   FT E A   AE F+  +L      
Sbjct: 61  PRTLFKPQSPVFRLTAEQDKAGIVEAFGMDGLLTLPFTKELAGTEAEAFVTDILRGRAAA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++TG  F FGK RAG    LQ+ G++ GF    ++         +SSS IR  L  G 
Sbjct: 121 SHLVTGFNFHFGKGRAGSPEFLQEVGQRDGFGVTTVEA-EEEGGDAISSSRIRRQLGAGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLGYR+ +   V+ G ++GRTLG+PTAN+ L+ +  L  G+YA+R R  D + +
Sbjct: 180 VAAAADLLGYRWRVGGTVVKGAQLGRTLGYPTANLALAENCRLAHGIYAVRLRRADGSLH 239

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT   NG  LLE+F+FDFS ++YG+R  VS F++LR E KF   E L   M
Sbjct: 240 DGVASFGRRPTF-DNGAPLLETFVFDFSDDLYGERIEVSLFEHLRGEEKFDSAEALVEQM 298

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
             D + ARK L ++ PLS  D  + F
Sbjct: 299 DRDSEAARKALAAATPLSNLDERLSF 324


>gi|227549060|ref|ZP_03979109.1| FAD synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078842|gb|EEI16805.1| FAD synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 330

 Score =  322 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 22/335 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +     +P  L   VV IG FDG+H GH L++ +A+  A     P  V++F PH
Sbjct: 1   MDILRGLR---QVPEALGATVVTIGVFDGVHRGHQLLISEAVVRARELGLPCVVMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I         L P S + +++E++G   L+   F  E A  S E +++ VL   L  
Sbjct: 58  PVAIFAPERAPKALIPLSERARLIEQLGVDYLVVIDFREELAGDSPEMYVRDVLAGVLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +TV+ G  F FGKD AG    +++ G+ YG   V + EL N+    V S+ +R  L +G 
Sbjct: 118 RTVVVGENFTFGKDAAGTAATMRELGKAYGIEVVTV-ELLNDAGVRVCSTAVREELDRGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD-- 234
           V  AA  LG  F +   +  G    GR LG+PTAN  ++    L  +GVYA      D  
Sbjct: 177 VRVAADFLGREFAVTGVIERGAGRGGRELGYPTANQYVADISALPADGVYAGWLTVVDGA 236

Query: 235 -----------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
                         Y    + G NPT   +    +ESFI D   ++YG+   V F   +R
Sbjct: 237 EKGPIVGDMEPGVRYPAAISVGTNPTF-GDARRSVESFILDRDADLYGRLARVEFVGKVR 295

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
             +KF  +++L   M  D +  R+IL +     ER
Sbjct: 296 DMVKFDSVDELLESMARDVETTRRILAADPKNPER 330


>gi|134102365|ref|YP_001108026.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133914988|emb|CAM05101.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 326

 Score =  322 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 152/329 (46%), Gaps = 21/329 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  +  +E    LP      VV IG FDGIH GH  ++  A+        P  +++F+PH
Sbjct: 1   MQRWRGLE---QLPGGWGRCVVTIGVFDGIHRGHQQLITHAVQRARRRGLPCVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++ E++G        FT E +   A+QF+ +VLVE L  
Sbjct: 58  PAEVVRPGSHPAQLTTLRRRAELAEQLGVDVFCVLPFTQEVSRIPADQFVHEVLVERLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-------NNKSQIVSSSNIR 171
             V+ G  FRFG   AGD   L++ GE++GF       L        ++ S   SS+ IR
Sbjct: 118 AVVVVGENFRFGHKAAGDITALEQLGERFGFEVETDALLTGPAERDGDDGSVTFSSTYIR 177

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD-ILLKEGVYAIR 229
           + +  G V+ AA  LG    +E  V+ G   G   LGFPTAN+       +  +G+YA  
Sbjct: 178 SCIDAGDVVAAASALGRYHRLEGIVVRGAGRGGKELGFPTANLNTPAYAAIPADGIYACW 237

Query: 230 FRT------QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           F        +   +     + G NPT        +E+F+ D   + YG++  + F   LR
Sbjct: 238 FTHRLRGAAEPGPALPAAVSVGSNPTF-SGTERTVEAFVLDIDADFYGEQVDLDFVRRLR 296

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +++F   + L   M  D  + R+IL + 
Sbjct: 297 GQVRFDSADALIEQMHRDVDEVREILRAD 325


>gi|284992340|ref|YP_003410894.1| riboflavin biosynthesis protein RibF [Geodermatophilus obscurus DSM
           43160]
 gi|284065585|gb|ADB76523.1| riboflavin biosynthesis protein RibF [Geodermatophilus obscurus DSM
           43160]
          Length = 324

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  +E     P  L   VV +G +DG+H GH  ++  A+  A   + P  +L+F+PH
Sbjct: 1   MRRWRGLEAT---PGDLGRTVVTVGMYDGVHRGHQQLIGTAVARARALDRPCLLLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++  +G   +    FT E    S E F   VLVE L  
Sbjct: 58  PSEVVRPGSHPAILTSLDRKAELVAGLGVDEMCVLPFTPEFMRLSPETFTHTVLVEHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
            +V+ G  F +G   AG    L + G ++GF    +    +   +    +SS+ +R  + 
Sbjct: 118 ASVVVGENFSYGHRAAGTVTTLAQEGRRFGFTVEPVPLAGDSSADGEITISSTYVRACVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
            G +++AA  LG    IE  V+ G++ GR LG+PTAN++  P   +  +GVYA      D
Sbjct: 178 AGDMVSAARALGRPHRIEGVVVRGDRRGRELGYPTANVESPPFTAIPADGVYAGGLVILD 237

Query: 235 QT------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                   +     + G NPT        +E+++ DF  ++YG+   V F   LRP   F
Sbjct: 238 PRTGASVSTSPAAISVGTNPTFQ-GTRRTVEAYLLDFDGDLYGEHVGVEFVQRLRPMAAF 296

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E L   M  D  + R+++
Sbjct: 297 SGVEDLVAQMDRDVARTREVM 317


>gi|187477910|ref|YP_785934.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bordetella
           avium 197N]
 gi|115422496|emb|CAJ49021.1| riboflavin biosynthesis protein [Bordetella avium 197N]
          Length = 321

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 11/316 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHP 59
            ++H++      P       + IGNFDG+H GH  IL Q  + A    +  +V++F PHP
Sbjct: 6   RIYHHL----PPPGQCAPCALTIGNFDGVHRGHQAILAQVREAAEKRGLIPSVMTFEPHP 61

Query: 60  RTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           R        +       +S    +   L   G   ++   F    A+ SA  FI+ +LV+
Sbjct: 62  REYFARLNRRPELAPTRISGLRDKVSALACAGIKQVLIEPFNARLADMSANAFIEDLLVK 121

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + ++ G  FRFG+ R+GD  +L++ G  +GF    + ++ +     +SSS +RTAL
Sbjct: 122 GLRTRWLLVGEDFRFGRKRSGDIDLLREAGLSHGFEVATLADVTDRHGHRISSSEVRTAL 181

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G +  A HLLG+ F +   VIHG K+GR LGFPT N++++P    + G+Y +R     
Sbjct: 182 AVGDLERAQHLLGHPFRVSGHVIHGRKLGRELGFPTMNLRVAPRFAARSGIYVVRAHGLG 241

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + VA+ G  P++   G +LLE ++ D     YG+   + F   LR E K+ D+  L
Sbjct: 242 DQPLAAVASLGVRPSVEEAGRVLLEVYLLDERINAYGKLVHIEFLHKLRDEEKYPDLPSL 301

Query: 295 KIYMGEDEKKARKILE 310
              + ED + AR    
Sbjct: 302 TAAIAEDARNARAYFA 317


>gi|240137095|ref|YP_002961564.1| putative riboflavin biosynthesis protein ribF [Methylobacterium
           extorquens AM1]
 gi|240007061|gb|ACS38287.1| putative riboflavin biosynthesis protein ribF [Methylobacterium
           extorquens AM1]
          Length = 337

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFAPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  + + + GVA++GR PT   +G  LLE  +FD
Sbjct: 225 TLGYPTANLALES-CGLAHGIYAVRVRLANGSLHDGVASYGRRPTF-DDGAPLLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +  
Sbjct: 283 FKGDLYGQEVAVELLAYLRGEEKFSSAEALIAQMDVDSARAKAAIRTDR 331


>gi|262195658|ref|YP_003266867.1| riboflavin biosynthesis protein RibF [Haliangium ochraceum DSM
           14365]
 gi|262079005|gb|ACY14974.1| riboflavin biosynthesis protein RibF [Haliangium ochraceum DSM
           14365]
          Length = 325

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 101/325 (31%), Positives = 164/325 (50%), Gaps = 15/325 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +F   E +++L   L   VVA+GNFDG+HLGH  +L +A+++A          +F+PH
Sbjct: 1   MEIF---EGHRALFRPLVAPVVALGNFDGVHLGHQRLLSRAVELARAGDSDAVAFTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  S     L+  + + ++  + G SA +   FT E A  + E F+Q +LV+    
Sbjct: 58  PAAVLAPSKAPPLLTTRARKLELFAEAGLSACVVEPFTAELAALAPEAFLQSILVDIFGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G+ RAG    L+  G   G     I  +     + +SS+ +R  +  G 
Sbjct: 118 RHIVVGYDFTYGRARAGTTETLRAFGAARGIGVDVIAPVEA-GGEAISSTRVRALVEAGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---- 234
           V +A  LLG  F +E  V+ GE  GRT+G PTAN+++   +L   GVYA+R         
Sbjct: 177 VSDAGALLGRSFDVEGAVVRGEGRGRTIGIPTANIEVGGALLPPGGVYAVRADLLGAPLA 236

Query: 235 -----QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
                +  ++GVAN G  PT    G   LE  + D S ++YG+   + F + LR E +F 
Sbjct: 237 DDAPRRAGWAGVANLGTKPTFGDGGEQTLEVHLLDRSDDLYGKTLRLHFVERLRAEQRFD 296

Query: 290 DIEKLKIYMGEDEKKARKILESSYP 314
            ++ L   +  D  +AR++L    P
Sbjct: 297 GVDALVRQIHTDIARARELLGCPAP 321


>gi|254559107|ref|YP_003066202.1| riboflavin biosynthesis protein ribF [Methylobacterium extorquens
           DM4]
 gi|254266385|emb|CAX22149.1| putative riboflavin biosynthesis protein ribF [Includes: Riboflavin
           kinase (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Methylobacterium
           extorquens DM4]
          Length = 337

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 108/289 (37%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+H GH  ++E     A + P  VL+F PHPR       P+F L+ PS +E +  ++
Sbjct: 45  NFDGVHRGHRTLIEAVRAEAGSHPAAVLTFEPHPRAFFSPDQPMFRLTGPSAKEIVFARL 104

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   LI  +F    A  SA  F++  L + L +  V+ G  F FG+ R G  G L +   
Sbjct: 105 GLDGLIVRRFDERLAGTSARDFVEGWLRDGLGLSGVVIGHDFHFGRGREGSPGTLAELCA 164

Query: 146 KYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           + G     +  +  +     +SSS IR AL  G V  A  LLGYR+ + + V HG+K GR
Sbjct: 165 EAGLSCRIVPAVSADPGDAPISSSAIRAALASGDVARANDLLGYRWFVLAQVRHGDKRGR 224

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           TLG+PTAN+ L     L  G+YA+R R  D + + GVA++GR PT   +G  LLE  +FD
Sbjct: 225 TLGYPTANLALES-CGLAHGIYAVRVRLADGSLHDGVASYGRRPTF-DDGAPLLEVHLFD 282

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           F  ++YGQ   V    YLR E KF   E L   M  D  +A+  + +  
Sbjct: 283 FKGDLYGQEVAVELLGYLRGEEKFSSAEALIAQMDVDSARAKAAIRTDR 331


>gi|52841171|ref|YP_094970.1| riboflavin biosynthesis RibF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628282|gb|AAU27023.1| riboflavin biosynthesis RibF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 328

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 5/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKTLRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       +   KF    A   A  F Q  L E L+++ ++ G  FRFGK R G
Sbjct: 75  REKIDVLNLCQVDYIYCIKFDARLAQTPALYFAQFYLFEALKIRYLLVGQDFRFGKSREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+  G  Y        +    +++ +SS+ IR AL +G++  AA LLG  +++   
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLI-ENEKISSTRIREALQQGNLRFAAKLLGRPYSMCGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT+     
Sbjct: 194 VIKGDGRGRQWGIPTANLGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPTVAGTKN 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L+ ++  
Sbjct: 253 I-LEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLKQNWLD 311

Query: 316 SERD 319
           S  D
Sbjct: 312 SVID 315


>gi|254785206|ref|YP_003072634.1| riboflavin biosynthesis protein RibF [Teredinibacter turnerae
           T7901]
 gi|237684120|gb|ACR11384.1| riboflavin biosynthesis protein RibF [Teredinibacter turnerae
           T7901]
          Length = 315

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 7/313 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRT 61
            H +  +  LPNH  G V  IG+FDG+H GH  ++ Q  + A  +  P  V+ F P P  
Sbjct: 7   IHGL--HSLLPNHH-GCVATIGSFDGVHRGHQEVIRQLREHASAHQVPALVMVFEPQPSE 63

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                     L     + + L   G   ++  +F  E    SA+ FI++VLV  L ++ +
Sbjct: 64  FFSQEKAPPRLMRLRDKTEALFAAGVDRVLCLRFNRELRGLSAQAFIEQVLVARLGIRHL 123

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           + G  FRFG DR GD  +L   GE++GF          +  Q +SS+ IR  L +     
Sbjct: 124 VIGDDFRFGCDRQGDYSMLAAAGERFGFSVCDTRT-ELDGGQRISSTRIRALLEQDAFAE 182

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSG 240
           AA LLGY + I   VI+G+++GRTLGFPTAN+ L       +GVYA+             
Sbjct: 183 AARLLGYEYRIRGRVIYGKQLGRTLGFPTANVHLGRYRTAVQGVYAVAVDIDGGAQNVPA 242

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  PT+      LLE  + +    +YG    V     LR E++F+ +  L+  +  
Sbjct: 243 VANIGVRPTVSGGREPLLEVHLLEHGGNLYGHWINVRIKHKLRSEMRFESLAALQAQITL 302

Query: 301 DEKKARKILESSY 313
           D + A++    ++
Sbjct: 303 DVEIAKRWFNETH 315


>gi|254293349|ref|YP_003059372.1| riboflavin biosynthesis protein RibF [Hirschia baltica ATCC 49814]
 gi|254041880|gb|ACT58675.1| riboflavin biosynthesis protein RibF [Hirschia baltica ATCC 49814]
          Length = 324

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 110/321 (34%), Positives = 172/321 (53%), Gaps = 15/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +FH  E   + P  ++G  VAIGNFDG+HLGH  ++     +    N P+ VL F+P 
Sbjct: 1   MKLFHTFE---NAPESVRGAGVAIGNFDGLHLGHRGVISTLRDLCTERNIPLGVLMFDPT 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       SP   +     + K+L++ G        F  E A  +  +F + VL + L V
Sbjct: 58  PFIFFNPDSPSKRIMSLKRRVKVLKQGGLDVAFALPFDAEMAGRTDFEFAKDVLSDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNI 170
             V  G  F +GK R G+   L+K G++ GF  +  D++  N  +I        +SS+ I
Sbjct: 118 SAVSVGYDFCYGKKRMGNVTTLKKFGDEMGFDVLVTDKITPNNMEIGAHGEALKISSTQI 177

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           R  ++ G + +A  ++   +  E+ V HGEK GRT+GFPTANM+LS     K G+YA+  
Sbjct: 178 RELISDGDMESAKLMMKDYWVTEAKVEHGEKRGRTIGFPTANMKLSDYQQPKFGIYAVWT 237

Query: 231 RTQDQTSYS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           R + + ++  GVANFGR PT   +   LLE ++FDF  ++Y +   V+F  +LRPE K+ 
Sbjct: 238 RIEGEKNWRQGVANFGRTPT-TGDRDPLLEVYLFDFEGDLYDKELEVAFVKFLRPEEKYD 296

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            +E L   + +D + A+++L 
Sbjct: 297 GLEPLIAQIQKDTENAKQVLA 317


>gi|114769409|ref|ZP_01447035.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HTCC2255]
 gi|114550326|gb|EAU53207.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HTCC2255]
          Length = 321

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 166/314 (52%), Gaps = 7/314 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTI 62
             I   Q + +  +G V AIGNFDG+HLGH   L    +IA  S   V  L+F PHPR  
Sbjct: 2   RTIRDYQFIADEDRGAVAAIGNFDGVHLGHQAALNLVQEIAKESGSYVGTLTFEPHPREY 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +S  F L     +   LEK+G   L +  F    +  SA +F + V+   L +  VI
Sbjct: 62  FAPTSTAFRLMSADAKANRLEKLGVERLYQLNFNAALSALSAREFARDVIHNALGLTHVI 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGKDRAG    L + G+++GF     + L++N  Q+ SS+ IR AL+ G   +A
Sbjct: 122 VGADFCFGKDRAGAASDLIQFGKEFGFKVTIAELLKDND-QVFSSTAIRNALSDGKPEDA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYS 239
           A +LG+   IE  VI G++ GR LG+PTAN+ ++     K GVYA+     D   Q  Y 
Sbjct: 181 ARMLGHLHRIEGPVIQGDQRGRELGYPTANLSINGLHPPKYGVYAVTVDILDGPSQGRYF 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G A+ G  PT        LE F+FDF  +IYG   +V+  +Y RPE+KF  ++ L + M 
Sbjct: 241 GAASIGERPTF-GVYKPNLEVFLFDFHADIYGANISVALVNYQRPELKFDTLDALIVQMN 299

Query: 300 EDEKKARKILESSY 313
           +D   A++ L + Y
Sbjct: 300 KDCMVAKETLNNLY 313


>gi|50954473|ref|YP_061761.1| riboflavin kinase/ FMN adenyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
 gi|50950955|gb|AAT88656.1| riboflavin kinase/ FMN adenyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
          Length = 314

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M VF  +     +P       V IG FDG+H GH  ++ +  ++A+   +   V++F+ +
Sbjct: 1   MKVFTAV---ADVPAGYGPSAVTIGKFDGVHTGHRAVIARLRQVADERGLAATVITFDRN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I        L     +  +L   G  A +   F    A  S ++F++++LV+ L  
Sbjct: 58  PLEVIAPEKCPPALVSNRQKLDLLAGTGIDATLMVPFDRALAELSPDEFVRRILVDRLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G+ FR+G+  AGD   L++RGE+YGF    ID++R  + + VSS+ IR  L +G 
Sbjct: 118 AVVLVGSDFRYGRGGAGDVAFLRERGEQYGFAVELIDDVRPERGRRVSSTWIRELLAEGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V +AA LLG   T+   V+HG   GR LGFPTAN+      ++  +GVYA  F T D   
Sbjct: 178 VAHAALLLGQVPTVRGVVVHGAVRGRELGFPTANLSPELEGLIPADGVYAG-FLTDDGQR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +    + G NPT        +E++  D   ++YG    ++F + +R  + +  +E L   
Sbjct: 237 WPSAISVGNNPTFEGVPHKQVEAYALDRELDLYGHTVELAFHERIRGMVAYAGVEPLIAQ 296

Query: 298 MGEDEKKARKILE 310
           + +D ++AR+IL 
Sbjct: 297 IRDDVERARRILA 309


>gi|167648012|ref|YP_001685675.1| riboflavin biosynthesis protein RibF [Caulobacter sp. K31]
 gi|167350442|gb|ABZ73177.1| riboflavin biosynthesis protein RibF [Caulobacter sp. K31]
          Length = 313

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 115/309 (37%), Positives = 172/309 (55%), Gaps = 6/309 (1%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            + H  +    LP   +G  VA+GNFDG+H GH  ++ QA K A     P+ V++F+PHP
Sbjct: 4   KIVHGWK---DLPETERGAAVALGNFDGVHRGHQQVIAQAAKAALAGRTPLGVVTFDPHP 60

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R + + + P F L   + Q + LE +G   L    F  E A+++  +F++KVLV  L VK
Sbjct: 61  RRLFRPTEPAFKLMTHAQQGRALEALGVDLLYLLPFDFEMASFNDREFVEKVLVGGLGVK 120

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G    FG+ R+G   +++  G +YGF     + + N + +  SS+ +R AL  GH 
Sbjct: 121 HVAVGFDISFGRGRSGSAELMRAYGAEYGFTVSVAEPVANREGEKFSSTGVRDALRDGHP 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             AA +LG  F +E  V  G+++GR LGFPTAN+++   ++ + GVYA R R  D     
Sbjct: 181 EGAARILGRPFAVEGVVRRGQQLGRQLGFPTANVEVEDYVVPRLGVYATRTRLPDGREVP 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVAN G NPT        LE+++FDF +++YGQ        +LRPE+KF  IE +   + 
Sbjct: 241 GVANLGNNPTTGEV-ETRLETWLFDFDEDLYGQVIETDLIAFLRPELKFDSIELMVEQIL 299

Query: 300 EDEKKARKI 308
            DE+ AR I
Sbjct: 300 RDEQAARAI 308


>gi|239928605|ref|ZP_04685558.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces ghanaensis ATCC 14672]
 gi|291436931|ref|ZP_06576321.1| riboflavin kinase (FAD synthetase) [Streptomyces ghanaensis ATCC
           14672]
 gi|291339826|gb|EFE66782.1| riboflavin kinase (FAD synthetase) [Streptomyces ghanaensis ATCC
           14672]
          Length = 317

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  A++   FT E +  SA  F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDAVLILPFTTEFSKLSAADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AG    L ++G  Y F    +D          +  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHKAAGTVDFLTEQGRIYDFAVEVVDLYVTGEAGGGEPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q 
Sbjct: 178 EGDVDGAAEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHAQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  ++R + +F  +E 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQARFDTLEA 295

Query: 294 LKIYMGEDEKKARKILESS 312
           L   M  D ++ ++++ ++
Sbjct: 296 LMEQMARDVERCKELVAAA 314


>gi|317486444|ref|ZP_07945270.1| riboflavin biosynthesis protein RibF [Bilophila wadsworthia 3_1_6]
 gi|316922300|gb|EFV43560.1| riboflavin biosynthesis protein RibF [Bilophila wadsworthia 3_1_6]
          Length = 333

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 105/313 (33%), Positives = 164/313 (52%), Gaps = 22/313 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G  V +GNFDG+HLGH  +L    + A  +      ++FNPHP  ++   +P   L+ P
Sbjct: 20  QGTSVTVGNFDGVHLGHQALLAMTCERAAATGTLPVAMTFNPHPLEVLTPYAPP-RLTTP 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LE  G + ++   FT E A  S E F++++L+  L ++ ++ G  F  GK RAG
Sbjct: 79  QARLALLEASGMALVMLVVFTSEFAAMSPETFVRRILLGTLNMRELLLGYDFTLGKGRAG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L + G+  GF+   +D L  +    VSS+ IR  L +G V  A+ LLG  ++++ +
Sbjct: 139 TPEVLAQLGKAEGFNVDRMDALSVHDEV-VSSTRIRELLHQGQVWEASSLLGRLYSVQGE 197

Query: 196 VIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFR----------------TQDQTSY 238
           VIHG+  G   LGFPTAN+  +P +L K GVY                          +Y
Sbjct: 198 VIHGKNRGGRLLGFPTANLAPTPTMLPKPGVYVTLATPSESAGSGLPFVFDPAHPTPNTY 257

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V N G NPT  P G L +E+ + DF  ++YG+   V+F + LR E+ F   + L   +
Sbjct: 258 PAVTNIGYNPTFGP-GALTVETHLLDFDADLYGKHLEVAFVERLRGEVTFTGPDSLVAQI 316

Query: 299 GEDEKKARKILES 311
            +D  +ARKILE+
Sbjct: 317 KKDADQARKILET 329


>gi|239905257|ref|YP_002951996.1| riboflavin kinase/FMN adenylyltransferase [Desulfovibrio magneticus
           RS-1]
 gi|239795121|dbj|BAH74110.1| riboflavin kinase/FMN adenylyltransferase [Desulfovibrio magneticus
           RS-1]
          Length = 312

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 106/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V + +E    +   L G  + IGNFDG+H+GH  +L++  + A         L+F+PH
Sbjct: 1   MIVVNRVE---DIHEALHGVCLTIGNFDGVHMGHAKLLQRTRERAVAAGLVSVALTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++  ++    ++    + + + + G    +   FT E A    E F+ +VLV  L +
Sbjct: 58  PRRVLMGNAAPPAITLLEHKLECIGQSGVQVCVVLPFTRELAAREPEDFVGQVLVGGLCL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FGK R G+  +L   G+KYGF    +D +  N +  VSS+ IR  +  G+
Sbjct: 118 KHLVIGYDYAFGKGRRGNFEMLSTMGQKYGFGVERLDPVIINGAV-VSSTRIRDMVQAGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V +A  LLG    +   V+HG+K GR LGFPTAN+ +  +++   GVYA+          
Sbjct: 177 VWDARPLLGRFHQVRGLVVHGQKRGRKLGFPTANVGVRDELVPLSGVYAVWVEVDGILR- 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+NPT   +  L +E+ I DF  +IY Q   V F   +R E KF   E+L   +
Sbjct: 236 PGVANIGKNPTF-GDFDLSVEAHILDFKGKIYDQPIRVHFVQRIRSEKKFSGPEELITRI 294

Query: 299 GEDEKKARKILES 311
            ED   AR IL +
Sbjct: 295 REDIGLARMILAA 307


>gi|54296957|ref|YP_123326.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Paris]
 gi|148360415|ref|YP_001251622.1| riboflavin biosynthesis protein RibF [Legionella pneumophila str.
           Corby]
 gi|53750742|emb|CAH12149.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Paris]
 gi|148282188|gb|ABQ56276.1| Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN
           adenylyltransferase) [Legionella pneumophila str. Corby]
          Length = 328

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 5/304 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V  IGNFDG+HLGH  +++     A+  N P+ +L F P P+           LS  
Sbjct: 15  KGAVATIGNFDGVHLGHQHLIKALRAKADEMNLPLVILLFEPQPKEYFHREKAPARLSTL 74

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L       +   KF    A  SA  F Q  L E L+++ ++ G  FRFGK R G
Sbjct: 75  REKIDALNLCQVDYIYCIKFDARLAQTSALYFAQFYLFEALKIRYLLVGQDFRFGKSREG 134

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+  G  Y        +    +++ +SS+ IR AL +G++  AA LLG  +++   
Sbjct: 135 DVNLLKTLGANYSCEVTVQSDFLI-ENEKISSTRIREALQQGNLRFAAKLLGRPYSMCGR 193

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VI G+  GR  G PTAN+ +    +  +GVYA++        Y GVAN G+ PT+     
Sbjct: 194 VIKGDGRGRQWGIPTANLGMHRLSIPLQGVYAVQVHINSNVFY-GVANIGKRPTVAGTKN 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + LE  +FDF   +YGQ   V F   LR E+KF  +E L   +  D   A+  L  ++  
Sbjct: 253 I-LEVHLFDFHGSLYGQLVQVIFLHKLRDEVKFSSVEALITQINSDIILAKAYLRQNWLD 311

Query: 316 SERD 319
           S  D
Sbjct: 312 SVID 315


>gi|170078993|ref|YP_001735631.1| riboflavin kinase/FAD synthase; RibF [Synechococcus sp. PCC 7002]
 gi|169886662|gb|ACB00376.1| riboflavin kinase/FAD synthase; RibF [Synechococcus sp. PCC 7002]
          Length = 331

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 167/330 (50%), Gaps = 20/330 (6%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-------------NSP---I 50
           + +  S    L    +A+GNFDG+H GH  ++  A+  A              NSP    
Sbjct: 1   MRVISSTTEALTPTCIALGNFDGVHRGHQRVIAPAVTQARALSQGVVVGDRLSNSPKIHA 60

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           TV++F+PHPR    S +P   L+P   ++  L + G   L+   F  E A  S ++F+ +
Sbjct: 61  TVVTFDPHPREFF-SGNPQHLLTPLPEKQAFLAQFGIEQLVLLPFDRELAALSPQEFVAE 119

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           +LV+ L+ +++  G+ F FG+ R+G    LQ   + +G        L       +SSS I
Sbjct: 120 ILVKQLQTQSISVGSDFSFGRGRSGSATDLQAIAKSFGIDVHIT-PLCREAETRISSSAI 178

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIR 229
           R AL  G +  A  LLG  ++++  V HG+K+GR +GFPTAN+Q      L K GVYA++
Sbjct: 179 REALATGQIQYANQLLGRPYSLQGTVTHGQKLGRQIGFPTANLQGEATKFLPKYGVYAVQ 238

Query: 230 FRTQD-QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
             +    T+  G+ N G  PT+       +E  + D+ Q++YG    V    YLRPE KF
Sbjct: 239 VTSDVLPTAQWGILNIGCRPTVTTTALPTVEVHLLDYHQDLYGANLKVDLLHYLRPEQKF 298

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSER 318
             ++ L+  + +D  +AR +L ++    ER
Sbjct: 299 ASLQALQNQIHQDGDRARTLLTTTSNQHER 328


>gi|237747568|ref|ZP_04578048.1| riboflavin kinase [Oxalobacter formigenes OXCC13]
 gi|229378930|gb|EEO29021.1| riboflavin kinase [Oxalobacter formigenes OXCC13]
          Length = 318

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 165/318 (51%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF     +  +P       + IGNFDG+H GH ++L Q  + A+  + P  VL+F+PH
Sbjct: 1   MKVFRGF--SYDVPR--GPCALTIGNFDGVHRGHMVLLAQLREAADRLHLPAAVLTFSPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +S +   T++P   + + L + G   +    F   TA+ +AEQFI+++LV
Sbjct: 57  PRQYFAFQSDKSVTAPATITPLREKIQALSQCGVDQVTIAHFDHLTASLTAEQFIEQILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L VK +I G KFRFGK R G   +L+  G+KYGFH   +  + +   + +SSS IR A
Sbjct: 117 RALGVKWLIIGEKFRFGKGRLGTTDMLKDAGKKYGFHVEVLPAVNDENGR-ISSSCIRKA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +      A LL   + +   V+HG+KIGR LGFPTAN+ +     +  GV+  +    
Sbjct: 176 LEESDFPKVAELLEKPYMMSGHVVHGDKIGRDLGFPTANLPIRHYNPILSGVFITQVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                  V+  G  PT+  +  ++LE+ I DF +  YG+   + F   LR   KF D+  
Sbjct: 236 SDEPLPSVSMIGTRPTIESDRHIMLETHILDFDRICYGKLIAIEFLKKLRDNQKFPDLNA 295

Query: 294 LKIYMGEDEKKARKILES 311
           LK  +G+D + AR   + 
Sbjct: 296 LKTAIGKDVETARTFFKE 313


>gi|239991159|ref|ZP_04711823.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 11379]
          Length = 318

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K VI G  FRFG   AG+  +L + G  Y +    ID          Q  SS+  R  + 
Sbjct: 118 KAVIEGPNFRFGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVAGAAEILGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-D 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             S     + G NP         +E++  D    ++YG    V F  Y+R  +KF  I++
Sbjct: 237 GESMPAAISVGTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDFLAYVRGMLKFDSIDE 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D K++ ++  +
Sbjct: 296 LLVAMAADVKRSSELTAA 313


>gi|19553182|ref|NP_601184.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|62390818|ref|YP_226220.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|145295882|ref|YP_001138703.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glutamicum R]
 gi|21324748|dbj|BAB99371.1| FAD synthase [Corynebacterium glutamicum ATCC 13032]
 gi|41326156|emb|CAF20319.1| PUTATIVE RIBOFLAVIN KINASE [Corynebacterium glutamicum ATCC 13032]
 gi|140845802|dbj|BAF54801.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 341

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 27/341 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++  ++   S+P  L+G VV IG FDG+H GH  ++ +A K A     P  +++F+PH
Sbjct: 1   MDIWSGLD---SVPADLQGSVVTIGVFDGLHRGHQSLIGEAKKQAEELGVPCVMVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+P   +  +  + G  A +   FT E A  SAE++   ++V+ L  
Sbjct: 58  PIAVFLPGKEPTRLAPLDYRLNLAAECGVDAALVIDFTKELAGLSAEEYFTTMIVDTLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++V+ G  F FG + AG    +++ G+K+G +   I  L ++  Q + S+ +R  L +G 
Sbjct: 118 RSVVVGENFTFGVNGAGTESTMRELGQKFGVNVT-IAPLLHDDDQRICSTLVRDYLDQGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  A   LG R+ +  +V+ G   G   LG+PTAN+ L   + L  +GVYA  F   D  
Sbjct: 177 VERANWALGRRYAVRGEVVRGAGRGGKELGYPTANLYLPTSVALPADGVYAGWFTITDDR 236

Query: 237 ------------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
                              Y    + G NPT   +    +E+FI D   ++YG    V F
Sbjct: 237 EIDKEISRDIDGTMVPGVRYQTAISVGTNPTF-GDERRSVEAFILDQEADLYGHHVMVEF 295

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
             +LR  +KF  +++L   M  D   AR IL     L + D
Sbjct: 296 VGHLRDMVKFNGVDELLDAMARDVTNARDILAKDKLLLDAD 336


>gi|285017716|ref|YP_003375427.1| riboflavin biosynthesis protein [Xanthomonas albilineans GPE PC73]
 gi|283472934|emb|CBA15439.1| probable riboflavin biosynthesis protein [Xanthomonas albilineans]
          Length = 329

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 165/313 (52%), Gaps = 8/313 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  ++ QA     A   P   LSF P P
Sbjct: 3   RLFRDVEGGTLFP---QGSVVCIGAFDGLHLGHRALVRQASARACALGVPTVALSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+    + + L+++G  ++   +F    A+ +AE F+Q+VLVE L  +
Sbjct: 60  REFFAPDAPPPRLTLARSKVQGLQQLGIESVGLLRFDRRMASMTAEAFVQRVLVERLRAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  FRFG  RAGD  +L+  G ++GF    I  +  ++ + +SS+ IR  L  G  
Sbjct: 120 EVWIGPAFRFGHKRAGDIALLRALGVQFGFTADEIAPVHLHEER-ISSTRIRELLVAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +AA LLG  + I   V+ G+++GRTLG+PTAN++ +       G+YA          + 
Sbjct: 179 AHAADLLGRPYAIGGRVVRGKQLGRTLGYPTANLRFAR-APALSGIYATWVHGAAAQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E  F D+  L   M 
Sbjct: 238 SVSSFGTRPTVQGVEP-LLEAHLFDFQGDLYGRHLEVEFVAKLRDEETFADLPALTAQMH 296

Query: 300 EDEKKARKILESS 312
            D  +AR +L ++
Sbjct: 297 RDAAQARHVLAAA 309


>gi|238028412|ref|YP_002912643.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia glumae BGR1]
 gi|237877606|gb|ACR29939.1| Riboflavin kinase/FAD synthetase [Burkholderia glumae BGR1]
          Length = 331

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 10/325 (3%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 6   VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 65

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +     ++    + + L + G   ++   F    AN   E F+++ LV  L  + ++
Sbjct: 66  FNPAGAPPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQPPEAFVEQTLVNGLHARWMM 125

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F +G  RAG+   L++ G +YGF    +  L       +SSS +R +L  G +  A
Sbjct: 126 VGDDFCYGARRAGNFASLREAGRRYGFDVEQMATLTAPNGTRISSSGVRASLAAGDLEAA 185

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              LG+ + I   V HG K+GR LGFPT N+ ++       G++ +            VA
Sbjct: 186 KAALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVLVHGLAGHPLPAVA 245

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT++  G +LLE+ + D+  + YG+   V F   LR E K+ D+E L   + +D 
Sbjct: 246 SLGVRPTVMDAGRVLLEAHVLDWHGDAYGKIVRVEFLKKLRDEAKYSDLETLTRAIAQDV 305

Query: 303 KKARKILESS------YPLSERDRI 321
              R    +       + +S  DRI
Sbjct: 306 ADTRAYFAAHGGRGTGFAISATDRI 330


>gi|254417322|ref|ZP_05031065.1| riboflavin biosynthesis protein RibF [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175860|gb|EDX70881.1| riboflavin biosynthesis protein RibF [Microcoleus chthonoplastes
           PCC 7420]
          Length = 325

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/327 (32%), Positives = 158/327 (48%), Gaps = 24/327 (7%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL--------------------EQAIKIAN 46
           + +  SL   L    VA+GNFDGIH GH  ++                    E+  +   
Sbjct: 1   MWVTSSLATALTPTAVALGNFDGIHRGHQQVIHPILQHSSLLPGQSEPINPQERVNREGK 60

Query: 47  NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
           +   T+ +F PHPR    S  P   L+P   +   L+++G   L+   F  E A  S EQ
Sbjct: 61  HIYPTLATFYPHPREFF-SGQPWKLLTPKPEKVDQLQRLGIEQLVLLPFDRELAALSPEQ 119

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           F+ K+L+E L    V  G  FRFG  R G    LQ     YG     +  ++  + + +S
Sbjct: 120 FVDKILIEQLRATHVSIGEDFRFGYRRTGTAKDLQAIAATYGVKVTIV-TIQTCQGERIS 178

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGV 225
           SS IR +L +G +L A  LLG  ++I   V+ G+++GRTLGFPTAN++  PD  L + GV
Sbjct: 179 SSLIRQSLEEGDILKANRLLGRPYSIMGQVVKGQQLGRTLGFPTANLEWFPDKFLPRNGV 238

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           Y +R          GV N G  PT+     L +E  + ++S ++YGQ  TVS   +LRPE
Sbjct: 239 YCVRVSRPSFPDQWGVMNIGERPTV-KGTCLTVEIHLLNWSGDLYGQTITVSLEQFLRPE 297

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESS 312
            KF  ++ L+  +  D        E+ 
Sbjct: 298 QKFASLDDLRTQIQADCAATTTFFETQ 324


>gi|78222600|ref|YP_384347.1| riboflavin kinase/FMN adenylyltransferase [Geobacter
           metallireducens GS-15]
 gi|78193855|gb|ABB31622.1| riboflavin kinase / FMN adenylyltransferase [Geobacter
           metallireducens GS-15]
          Length = 322

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 179/323 (55%), Gaps = 8/323 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           MH+F +IE    +   L   VV IGNFDG+HLGH  I  +  + A        V++F PH
Sbjct: 1   MHIFRSIE---EIAEKLPNAVVTIGNFDGVHLGHREIFRRVKREAAAIGGVSLVITFIPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        +S  + +E +LE  G   L+   FT E A+ SAE+F++ +LV  + V
Sbjct: 58  PIKMLGVKKGFRLISTYAEKETLLEASGIDYLLIIPFTGEFASISAERFVRDILVGTIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  + FGK+R GD  +L++ GE+ GF    ++ + +      SS+ +R  + +G 
Sbjct: 118 RKLIIGYDYAFGKNRQGDVTMLRRMGEELGFTVDMLEPITSGDLVY-SSTAVRQMVAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     LLG  F++   V+HG + G+ LGFPTAN+Q   +++ K GVYA++ + ++ T+Y
Sbjct: 177 VRGVVRLLGRHFSVGGTVVHGRQRGKGLGFPTANLQTDKELIPKPGVYAVKVKVEE-TTY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT   NG L +E FIFDF  +IYG+   + F D +R E+ F + + L+  +
Sbjct: 236 DGACNIGDNPTF-GNGSLSIEVFIFDFDGDIYGREVRLYFVDRIRDEVTFPNPQVLQEAI 294

Query: 299 GEDEKKARKILESSYPLSERDRI 321
             D  + R++L     +  ++ +
Sbjct: 295 ARDVARCRELLRDVAIIEYQEYL 317


>gi|119511247|ref|ZP_01630363.1| hypothetical protein N9414_18658 [Nodularia spumigena CCY9414]
 gi|119464125|gb|EAW45046.1| hypothetical protein N9414_18658 [Nodularia spumigena CCY9414]
          Length = 352

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 166/344 (48%), Gaps = 39/344 (11%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--------------- 49
            ++ +  S+   LK   VA+G FDG+HLGHH +++  +    + P               
Sbjct: 9   RSMWVTSSMETLLKPTAVALGKFDGVHLGHHRVIQPILPPTKDEPRREDGENFLNYSDSS 68

Query: 50  ---------ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100
                     TV++F+PHP        P   L+P   + + L  +G   L+   F  E +
Sbjct: 69  PTPPQEQTYSTVVTFDPHPLEFFTG-QPRPLLTPLEEKVQQLRSLGVEQLVLLPFDKELS 127

Query: 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN 160
             S + F++++LV+ L+ + +  G  F FGK R G    LQ    KY      +      
Sbjct: 128 ALSPQDFVEQILVKQLQCRRISVGQDFCFGKQRRGTAKDLQLLAAKYHIPVTIVSLQTYT 187

Query: 161 K-----SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
                    +S+S IR  L  G + NA  LLG  +T+   V+ G+K+GRT+GFPTAN+QL
Sbjct: 188 DKAPTQEAPISTSLIRHYLESGDIKNANLLLGRPYTLIGTVVPGQKMGRTIGFPTANLQL 247

Query: 216 SPDI-LLKEGVYAIRFRTQDQ-----TSYS--GVANFGRNPTMVPNGPLLLESFIFDFSQ 267
             D  + ++GVYA+R     Q     T Y   GV N G  PT+  +  L +E  +FD+S 
Sbjct: 248 PKDKFVPRQGVYAVRAAILSQTPDATTPYQNLGVMNIGNRPTVNGSN-LSVEVHLFDWSS 306

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           ++YG++  V   ++LRPE KF  +E LK  +  D   AR+ L +
Sbjct: 307 DLYGKQLGVQLVEFLRPEQKFPTLEDLKTQIQLDCTVAREHLSA 350


>gi|323135809|ref|ZP_08070892.1| riboflavin biosynthesis protein RibF [Methylocystis sp. ATCC 49242]
 gi|322398900|gb|EFY01419.1| riboflavin biosynthesis protein RibF [Methylocystis sp. ATCC 49242]
          Length = 317

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 7/308 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
               S P  L G V A+GNFDG+H GH  ++ +A  +A     P  +L+F PHP  +   
Sbjct: 10  RDPASPPAGLDGAVAALGNFDGLHRGHRGVVARAQALAKKLGKPCALLTFEPHPADVFAG 69

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            S IF L+PP  +     ++G   +I   F    A   A +F +++LV+ L +  V+ G 
Sbjct: 70  QSVIFRLTPPDAKAAQAARLGLDGMIVLTFDRAFAARPAREFTEEILVKRLGLSAVVAGY 129

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNA 182
            FRFG  R G    L   G + GF    +D +  ++    + VSS+  R  L KG V  A
Sbjct: 130 DFRFGAGREGGPEFLVAEGNRLGFAVEIVDRITQDEDGSLEAVSSTATRELLEKGDVAAA 189

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V HG+K GR LGFPTAN+ L P   L+ G+YA+  +    T   GVA
Sbjct: 190 RRLLGHPYFVLGRVRHGDKRGRLLGFPTANIALDPSNRLRHGIYAVTLQADGVTR-DGVA 248

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           NFGR PT   NG  LLE F+FDF  ++YG+   V+F+ ++R E KF  +E L   M +D 
Sbjct: 249 NFGRRPTF-DNGAPLLEVFVFDFDGDLYGKEVEVAFYGFIRGEEKFDSVEALIDRMHDDS 307

Query: 303 KKARKILE 310
            +AR+IL 
Sbjct: 308 DRAREILA 315


>gi|302554529|ref|ZP_07306871.1| riboflavin biosynthesis protein RibF [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472147|gb|EFL35240.1| riboflavin biosynthesis protein RibF [Streptomyces
           viridochromogenes DSM 40736]
          Length = 317

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIRHAVNRARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++  +G  A++   FT E +  S   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAAHHRRAELMADLGVDAVLILPFTTEFSKLSPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+   L  +G+ Y F    +D          +  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHKAAGNVEFLATQGKTYDFEVEVVDLYVTGEAGGGEPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q 
Sbjct: 178 EGDVEGAGEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHAQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  ++R + KF+ ++ 
Sbjct: 238 -EAMPAAISVGTNPQF-EGTERTVEAYAIDRVGLDLYGLHVAVDFLAFVRGQAKFETLDA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   MG+D KK R+++ +
Sbjct: 296 LLEQMGQDVKKCRELVAA 313


>gi|332702454|ref|ZP_08422542.1| riboflavin biosynthesis protein RibF [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552603|gb|EGJ49647.1| riboflavin biosynthesis protein RibF [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 315

 Score =  320 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 6/304 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSP 68
             +   L+G    IGNFDG+H GH  ++       +       V++F PHP         
Sbjct: 8   DEISLALEGSCATIGNFDGVHKGHQRLISMTAQRALERGLTSVVVTFEPHPLRFFTGRKS 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             +++    + +++  +G    +   F  E A    E F+++ LV+ L VK +  G  + 
Sbjct: 68  PPSITLLPQKLELIAALGPQVTLVLPFNHELAALEPEAFVRRYLVDGLRVKELFIGYDYA 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G+ G+L   G+++GF    ID +   ++ IVSS+ +R  +  G V  A  LLG 
Sbjct: 128 FGKGRLGNYGLLTLLGQEHGFAVEQIDPVIVGEA-IVSSTRVRDMVESGRVWEAHDLLGR 186

Query: 189 RFTIESDVIHGEKI-GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGR 246
            + +   VIHG K  G  LGFPTAN++   ++L K GVYA+   T+       GVAN G 
Sbjct: 187 FYQVRGMVIHGRKRGGDLLGFPTANLEPYDELLPKPGVYAVWVETEYPGELRRGVANIGH 246

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT   N  L +E+ I D+  ++YG+   + F   +R E KF   ++L   + ED + +R
Sbjct: 247 NPTFGENA-LSVEAHILDYKAQLYGREIRIHFVQRIRDERKFSGPQELVARINEDVRLSR 305

Query: 307 KILE 310
           +IL+
Sbjct: 306 QILD 309


>gi|258652424|ref|YP_003201580.1| riboflavin biosynthesis protein RibF [Nakamurella multipartita DSM
           44233]
 gi|258555649|gb|ACV78591.1| riboflavin biosynthesis protein RibF [Nakamurella multipartita DSM
           44233]
          Length = 313

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  ++    +P +    VV IG FDG+H GH  ++ +A+++      P  +++F+PH
Sbjct: 1   MERWRGVD---EIPPNWGRCVVTIGVFDGVHRGHQALIGEAVRVGREHGLPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L     + +++ + G  AL+   FT   +  SAE+F+  VLV+ L  
Sbjct: 58  PAEVVRPGSHPAMLVTLRRRAELIAEQGVDALLVLPFTPALSQVSAEEFVHDVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AG   +L++ G ++GF    I  +       VSS+ +R  +  G 
Sbjct: 118 AHVVVGENFRFGHRGAGSVDLLRELGPRFGFAVHGITLVPGPDEVTVSSTYVRACVGAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           ++ A   LG    +E  V+HGE   G  LG+PTAN+ ++    +  +G+YA  F      
Sbjct: 178 MVAATAALGRPHRVEGFVVHGEGRGGAQLGYPTANLDVAEHAAIPADGIYAGWF-VLGTR 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                 + G NPT        +E F+ D     YG+R    F + LR  +KF  ++ L  
Sbjct: 237 RSPLAVSIGTNPTF-SGRERTVEGFVIDEGGNFYGRRVAFDFVERLRDTVKFDSVDALIA 295

Query: 297 YMGEDEKKARKIL 309
            +  D  + R++L
Sbjct: 296 QIDTDVARTRQVL 308


>gi|328885412|emb|CCA58651.1| Riboflavin kinase or FMN adenylyltransferase [Streptomyces
           venezuelae ATCC 10712]
          Length = 322

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +     +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGL---ADIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPCVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAGLGVDAVLVLPFTAEFSQLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K VI G  FRFG   AG+   L + G  Y +    ID   +         SS+  R  + 
Sbjct: 118 KAVIEGPNFRFGHRAAGNVAFLTELGATYDYEVEVIDLYVSGSAGGGDPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G +  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA       
Sbjct: 178 EGDMTGAAEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLTAAG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
                   + G NP         +E++  D    ++YG    V F +Y+R  +KF  ++ 
Sbjct: 238 -ERMPAAISVGTNPQF-DGTERTVEAYAIDREGLDLYGLHVAVDFLEYVRGMLKFDTLDD 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M  D K+ R++ E+
Sbjct: 296 LLEAMAGDVKRCRELTEA 313


>gi|297183896|gb|ADI20018.1| fad synthase [uncultured gamma proteobacterium EB000_65A11]
          Length = 319

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    KG VV +GNFDG+H GH  +L      +     P  ++ F P 
Sbjct: 1   MEITRGM---VNLSPQPKGCVVTLGNFDGVHKGHQAVLANVRAKSKELGLPSVLVCFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       +    L+    + ++L   G   ++  +F   T + +A +FI ++LVE L  
Sbjct: 58  PLEYFDEFNAPARLTRFREKIELLSAQGVDRVLCLRFNEATRSMTAAEFI-QLLVEKLNT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G   +FG DR+G+  +L + GE++GF    +  L   +++ VSSS IR  L  G 
Sbjct: 117 KALFVGDDAKFGADRSGNFSLLVEAGEEFGFEVTNLRTLTFGETR-VSSSRIRQCLALGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR---FRTQDQ 235
           +  A  LLGY ++I+  V++G ++GRTL  PTAN+QL       +GV+A+         +
Sbjct: 176 LKQAKELLGYPYSIKGKVVYGRQLGRTLDAPTANVQLHRYRAPIDGVFAVDVSIDEGAGE 235

Query: 236 TSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             Y GVAN G  PT+       +LE F+FDF  ++YG    V F   LR E KF  +E+L
Sbjct: 236 KVYQGVANVGVRPTLEEESLKPILEVFLFDFDGDLYGSCVKVVFCSKLRNEKKFDGLEEL 295

Query: 295 KIYMGEDEKKARKILES 311
           K  +  D  +A+     
Sbjct: 296 KQAIAADVTQAKLFFAE 312


>gi|304413764|ref|ZP_07395208.1| bifunctional flavokinase and FAD synthetase [Candidatus Regiella
           insecticola LSR1]
 gi|304283855|gb|EFL92249.1| bifunctional flavokinase and FAD synthetase [Candidatus Regiella
           insecticola LSR1]
          Length = 401

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 106/358 (29%), Positives = 162/358 (45%), Gaps = 53/358 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++  H  G V+ IGNFDG+HLGH  +L Q         +P+ V+ F P 
Sbjct: 48  MELIRGI---HNIRAHHYGCVLTIGNFDGVHLGHKALLRQLKHEGQRLKAPVMVMIFEPQ 104

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    + K L ++G   L+  +FTL  A  +A +FI ++LV+ L++
Sbjct: 105 PLELFAPEKAPTRLTRLRDKIKYLAQIGVDYLLCVRFTLPFATLTAHEFITQLLVKKLKI 164

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FG DR GD  +LQ+ G ++GF  V      N+ S+ +SS+ IR AL    
Sbjct: 165 KFLTVGDDFHFGSDRLGDIKLLQQAGTEFGFDVVNTGSFCNSGSR-ISSTAIRQALQNDD 223

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR--------- 229
           ++ A  LLG+ ++I   VIHG+++GRTLGFPTAN+ L       +GVYA+          
Sbjct: 224 LVLAEDLLGHPYSITGRVIHGDELGRTLGFPTANISLKRLAAPVKGVYAVDVYGLSSIPT 283

Query: 230 -------------------------------------FRTQDQTSYSGVANFGRNPTMVP 252
                                                +   D     GVAN G  PT+  
Sbjct: 284 VLQVAASRPGRETDERRQLRDSANVRSQQRGSFEGEGYTGSDDKPLRGVANIGTRPTVA- 342

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                LE  IF  ++++YG    +   + LR E  F  ++ L+  +  D   A+K   
Sbjct: 343 GSRQQLEVHIFAITKDLYGCHIEIVLREKLRNERCFVSLDTLRQQIASDVLMAKKFFR 400


>gi|312114351|ref|YP_004011947.1| riboflavin biosynthesis protein RibF [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219480|gb|ADP70848.1| riboflavin biosynthesis protein RibF [Rhodomicrobium vannielii ATCC
           17100]
          Length = 321

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 154/311 (49%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V H       +P+  KG  +AIG FDG+H GH  +L  A + A +   P+  + F P+
Sbjct: 1   MDVVHGW---HEVPDSAKGASLAIGTFDGVHRGHRAVLHAAQEKAQDGRLPMGAMVFEPY 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q    +F L+    +  +L   G        F  + A   A+ F++++LV+   +
Sbjct: 58  PRKFFQPQKTLFRLTTLQRKLDLLAAYGCGFTAVIPFDADLAGLPADAFVEQILVDAFAI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K    G  F FGK R+G+  +L   G ++GF    +   +     + SS+ IR  L +G 
Sbjct: 118 KHASVGYNFFFGKGRSGNPDVLAALGRQHGFGVTVVSA-QGYAGDVFSSTRIRELLAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA +LG  + I   V  G   G+ LG+PTAN++L   + LK G+YA+      +   
Sbjct: 177 VAAAAEMLGSWWRIAGPVEGGAGRGKVLGYPTANIRLEDGVSLKHGIYAVNAYVDGRKV- 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G +  G  PT    G  LLE+F+FDF  ++YG+   + F  Y+R + KFK  E L   M
Sbjct: 236 QGASYLGTRPTF-DAGQPLLETFLFDFDGDLYGKTIEIEFIAYIRDDAKFKSAEALAQQM 294

Query: 299 GEDEKKARKIL 309
             D  KA++IL
Sbjct: 295 ATDVAKAKEIL 305


>gi|146298561|ref|YP_001193152.1| riboflavin biosynthesis protein RibF [Flavobacterium johnsoniae
           UW101]
 gi|146152979|gb|ABQ03833.1| riboflavin biosynthesis protein RibF [Flavobacterium johnsoniae
           UW101]
          Length = 310

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/315 (34%), Positives = 173/315 (54%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +FH+I    +     K  ++ +G FDG+H+GH  ILE+  +   N      VL+F PH
Sbjct: 1   MKLFHSINDFHT----TKKTILTLGTFDGVHIGHKKILERITENTENGKYESLVLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S I  L+  S + K+LE  G   L+ + F    +  +AE+F+  +LV+   +
Sbjct: 57  PRMVLQEKSEIKLLNTISEKTKLLEATGIENLVIHPFNESFSRLTAEEFVHSILVDQFHI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G   RFG++R  +   L   G +YGF    I      +   VSS+ IR ALT+G+
Sbjct: 117 QKIIIGHDHRFGRNRTANIENLIAFGIEYGFEVEQISA-EEIQDVSVSSTKIRKALTEGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQT 236
           ++ A   LGY + +  +V+ G+++GRT+GFPTAN+Q+  +  ++ K GVY +R    D+ 
Sbjct: 176 MILANEYLGYDYFLTGEVVQGKQLGRTIGFPTANIQIEEEYKLIPKNGVYVVRALI-DEK 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G+ N G NPT+       +E  +FDF  +IYG++  VS   YLR E KF  I+ LK 
Sbjct: 235 EVFGMMNIGFNPTVN-GQKQTIEVNLFDFDADIYGKKIEVSLLQYLRDEQKFGSIDLLKA 293

Query: 297 YMGEDEKKARKILES 311
            + +D++ A   +  
Sbjct: 294 QLNQDKQNALAFVSK 308


>gi|153869798|ref|ZP_01999324.1| Riboflavin biosynthesis protein ribF [Beggiatoa sp. PS]
 gi|152073737|gb|EDN70677.1| Riboflavin biosynthesis protein ribF [Beggiatoa sp. PS]
          Length = 299

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 94/296 (31%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V  IGNFDG+HLGH  +L Q    A     P  V+ F P P+     ++    L+   
Sbjct: 2   GCVATIGNFDGVHLGHQAVLLQLATRAKALQWPTVVIIFEPQPQEFFTPNNVPARLTRLR 61

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   +   G   ++R +F  + A+  A  FI+++L++ L +K ++ G  FRFG+ R G 
Sbjct: 62  EKLIAMRHYGVERVLRLRFDTQFASLPASDFIEQILIKGLNIKHLVIGDDFRFGQKRQGT 121

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L + G K+ F           K + VSS+ +R AL +G + NA  LLG  +T+   +
Sbjct: 122 FTTLVEAGRKWDFTVENQQTFMLGKER-VSSTRVREALMQGDLQNAKALLGRPYTLWGRI 180

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            +G ++GR +GFPTAN+ L   +    GV+A+      +   +GVAN G  PT+      
Sbjct: 181 RYGRQMGRQIGFPTANIFLHRPVSPLRGVFAVLVHGLKKEPLTGVANLGTRPTV-DGHQF 239

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LLE  +F+F + IYG    V F   +R E +F   E LK  +  D + A+ +  ++
Sbjct: 240 LLEIHLFNFDKTIYGHDVEVEFVKKIRDEQRFASFEALKQQIMLDVQTAKAVFANN 295


>gi|254362637|ref|ZP_04978726.1| riboflavin kinase [Mannheimia haemolytica PHL213]
 gi|153094251|gb|EDN75122.1| riboflavin kinase [Mannheimia haemolytica PHL213]
          Length = 320

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 116/323 (35%), Positives = 171/323 (52%), Gaps = 18/323 (5%)

Query: 1   MHV---FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSF 55
           M +   FHN++ + +L    +G V++IGNFDG+HLGH  IL +     +    P  V+ F
Sbjct: 1   MQLIRGFHNLDKHIALN---QGCVLSIGNFDGVHLGHQNILARLCDRALDLGLPSVVMLF 57

Query: 56  NPHPRTIIQSSS-------PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
            P PR      S       P   L     + K LE+ G   ++  +F+ + A  SA+ FI
Sbjct: 58  EPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCVRFSEKFAQISADDFI 117

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
             +L + L+V+ +  G  FRFG  RAG    L+  G KY F         +   + +SSS
Sbjct: 118 SDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAVEE-SHTHSLNEERISSS 176

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            +R AL    +  A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+A+
Sbjct: 177 LVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPTANIMLNRLVTPIQGVFAV 236

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           + +T+ Q S++G+AN G  PT+    P LLE  IFDF+  IYG+   V F   LR EIKF
Sbjct: 237 KVKTK-QGSFNGIANVGNRPTINGTKP-LLEVHIFDFNASIYGEAIEVIFLKKLRNEIKF 294

Query: 289 KDIEKLKIYMGEDEKKARKILES 311
            D E LK  + +D  +A +  + 
Sbjct: 295 PDFEALKAQIEKDRLQAVEFFKE 317


>gi|301062685|ref|ZP_07203303.1| riboflavin biosynthesis protein RibF [delta proteobacterium NaphS2]
 gi|300443208|gb|EFK07355.1| riboflavin biosynthesis protein RibF [delta proteobacterium NaphS2]
          Length = 308

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 162/314 (51%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  ++E    +    +  V+ IGNFDG+H GH  + +   K A        V++F+PH
Sbjct: 1   MSIISDLE---QINQTFRNPVLTIGNFDGVHKGHLRLFDLTKKRAAAISGQSAVMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    ++    + +++   G   +    FT + A+ SA+ FI+ +LV  + +
Sbjct: 58  PIRVMKPGNGPRLITLTDQKLELITAAGMDIIFCLPFTRQFASISAQDFIRDILVNKIGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FG  RAG   ILQ  G+   F    +  +      +VSS++IRT + +G 
Sbjct: 118 KEIVVGYDYSFGAGRAGGIEILQDMGKDLHFQVHVVPPVYVED-TLVSSTSIRTLVQEGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  + +   V+ G+  G   LG+PTAN+ L  +++ K GVY ++   + +T 
Sbjct: 177 LHEAKKLLGRDYQVGGTVVKGKNRGGRLLGYPTANLALIDELVPKNGVYVVKVLVEGRT- 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G NPT   +G   +E+ I +F + + G++  + F + LR E  F+ +E L   
Sbjct: 236 YDGVTNVGYNPTF-GDGVFSVETHILNFQENLLGKQIRIKFVERLRDEKTFQSVEDLVAQ 294

Query: 298 MGEDEKKARKILES 311
           +  D  +A +IL +
Sbjct: 295 IERDIVRAIEILTA 308


>gi|304320105|ref|YP_003853748.1| riboflavin biosynthesis protein RibF [Parvularcula bermudensis
           HTCC2503]
 gi|303299008|gb|ADM08607.1| riboflavin biosynthesis protein RibF [Parvularcula bermudensis
           HTCC2503]
          Length = 314

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/310 (34%), Positives = 150/310 (48%), Gaps = 7/310 (2%)

Query: 2   HVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
            V H  +E + + P   +G V  IGN DG+H GH  ++ +A + A     P+ V  F+PH
Sbjct: 5   EVLHAPLECDVAAP--YRGAVSVIGNLDGVHRGHQALIGRAKERAEAASRPLAVTVFDPH 62

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +     P F L+    + +IL  +G   +    F       + E F++  L E L +
Sbjct: 63  PRRVFSPEGPPFLLTKLETKAEILGSLGVDYVFVLPFNDYLRTQTPETFVRHTLAERLGL 122

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T+ITGT FRFG  R+GD   L +     G     I  +    ++  SSS IR AL  G 
Sbjct: 123 HTIITGTDFRFGAGRSGDCTALARHAAASGMQAEAISPVLAPGTEKYSSSGIRAALQAGD 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA  LG  ++I   V  G ++ RTL FPTAN+ L P +  K GVYA      D    
Sbjct: 183 PQKAARWLGRPWSILGTVEQGRQLARTLDFPTANISLGPYVRPKFGVYAT-STLIDGERV 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       LE  +FD + ++YG+     F  +LRPE KF  I+ LK  +
Sbjct: 242 PGVANIGVRPTVDGTAEW-LEVHLFDVAADLYGRALDTQFLAFLRPEQKFDGIDALKAQI 300

Query: 299 GEDEKKARKI 308
             D   AR I
Sbjct: 301 ATDGALARNI 310


>gi|21224059|ref|NP_629838.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces coelicolor A3(2)]
 gi|256784861|ref|ZP_05523292.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces lividans TK24]
 gi|289768756|ref|ZP_06528134.1| riboflavin biosynthesis protein RibF [Streptomyces lividans TK24]
 gi|4464269|emb|CAB37472.1| probable riboflavin kinase (FAD synthetase) [Streptomyces
           coelicolor A3(2)]
 gi|289698955|gb|EFD66384.1| riboflavin biosynthesis protein RibF [Streptomyces lividans TK24]
          Length = 318

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 97/321 (30%), Positives = 156/321 (48%), Gaps = 12/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  A++   FT E +  SA  F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMADLGVDAVLILPFTKEFSKLSAADFVVKVLVDRLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+   L ++G+ Y F    +D          +  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHKAAGNVDFLIEQGKVYDFEVEVVDLYVTGDAGGGEPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR +GFPTAN++  P   +  +GVYA     Q 
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGREMGFPTANVETLPHTAIPADGVYAGWLHAQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    E+YG    V F  ++R + KF+ ++ 
Sbjct: 238 -EAMPAAISVGTNPQF-EGTERTVEAYAIDRVGLELYGLHVAVDFVAFVRGQAKFETLDA 295

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L   M  D  + R+I  +  P
Sbjct: 296 LLEQMAVDVDRCREITATDAP 316


>gi|297191716|ref|ZP_06909114.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721429|gb|EDY65337.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 319

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 155/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVQRARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   +  ++ ++G  A++   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRADLMAELGVDAVLVLPFTAEFSKLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           + VI G  FRFG   AG+   L + G  Y +    +D          +  SS+  R  + 
Sbjct: 118 RAVIEGPNFRFGHRAAGNVDFLAEMGRTYDYEVEVVDLYVRGEAGGGEPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA       
Sbjct: 178 EGDVEGAAEILGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLTAAG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
                   + G NP         +E++  D    E+YG   TV F  Y+R + KF  IE 
Sbjct: 238 -ERMPAAISVGTNPQF-DGTERTVEAYAIDRVGLELYGLHVTVDFLAYVRGQEKFDTIES 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M +D KK R++  S
Sbjct: 296 LLVAMADDVKKCRELTAS 313


>gi|332291638|ref|YP_004430247.1| riboflavin biosynthesis protein RibF [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169724|gb|AEE18979.1| riboflavin biosynthesis protein RibF [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 309

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 169/301 (56%), Gaps = 7/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           N  KG VV IG FDG+HLGH  I+ +  +   AN+    VL+F PHPR ++Q  + +  +
Sbjct: 11  NSEKGTVVTIGTFDGVHLGHRQIINRLNESARANDWESCVLTFFPHPRMVLQKDTSLKLI 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + ++LE +G   L+ + FTL+ + Y AE F++++LV  L  K VI G   RFG++
Sbjct: 71  NTIDERARLLEGLGLDHLVIHPFTLDFSRYHAETFVEEILVNSLNAKKVIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  +   L++ GE+ GF    I + +  +   VSS+ +R +L  G V  A   L   F +
Sbjct: 131 RNANIEDLKRFGEQLGFEVEEISK-QELEDVAVSSTKVRKSLEAGDVALANSYLDQAFML 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V+ G  +GRT+G+PTAN++++ D  ++  +G Y ++ R   +  Y G+ N G NPT+
Sbjct: 190 TGTVVKGRSLGRTIGYPTANLEIAEDYKLIPAQGAYVVQSRINGKIVY-GMMNIGTNPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E++ FDFS+++YGQ   +   D +R E  F  +++L   M EDEK AR  + 
Sbjct: 249 -GGSAQTIETYFFDFSKDLYGQELEIQLLDRIRDEKTFASVDELVKAMKEDEKYARDYIN 307

Query: 311 S 311
            
Sbjct: 308 K 308


>gi|332283970|ref|YP_004415881.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pusillimonas sp. T7-7]
 gi|330427923|gb|AEC19257.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pusillimonas sp. T7-7]
          Length = 300

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 162/296 (54%), Gaps = 7/296 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTII-----QSSSPIFTLSP 74
           + IGNFDG+H GH  IL +  K  +      TV++F+PHPRT       +       +S 
Sbjct: 1   MTIGNFDGVHRGHQAILARVRKQALERGLAATVMTFDPHPRTYFARRGQRPELVPTQISS 60

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +   L   G   +I  +F  + A+ SAE FI+ +LV+ L  + ++ G  FR+G  R+
Sbjct: 61  LRDKLTALAAHGLDQVILERFNQKMADMSAEDFIRHLLVQGLNTRWLLVGEDFRYGHKRS 120

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L++ G+++GF    I ++ +     +SSS +RTAL  G++  A HLLG+ + +  
Sbjct: 121 GDIELLRRAGQEHGFEVETIADVADEHGHRISSSELRTALAVGNLERAEHLLGHSYRLSG 180

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+K+GR++G+PT NM++     L+ G+Y +R       + +GVA+ G  PT+  +G
Sbjct: 181 HVVHGQKLGRSIGYPTLNMKVPTQCALRSGIYVVRAHGLGPQAINGVASLGVRPTISHDG 240

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            L+LE  + D   + YG+   V F +YLR E KF D+  +   +  D + AR    
Sbjct: 241 RLMLEVHLLDCHIDAYGKLTCVEFLEYLRDEEKFPDLPTMIAAIDNDAQSARDYFA 296


>gi|182435599|ref|YP_001823318.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776233|ref|ZP_08235498.1| riboflavin biosynthesis protein RibF [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464115|dbj|BAG18635.1| putative riboflavin kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656566|gb|EGE41412.1| riboflavin biosynthesis protein RibF [Streptomyces cf. griseus
           XylebKG-1]
          Length = 318

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 13/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  A++   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDAVLILPFTAEFSKLSPADFIAKVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K VI G  FRFG   AG+  +L + G  Y +    ID          Q  SS+  R  + 
Sbjct: 118 KAVIEGPNFRFGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA       
Sbjct: 178 EGDVAGAAEILGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEVAG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             S     + G NP         +E++       ++YG    V F  Y+R   KF  I+ 
Sbjct: 238 -ESMPAAISVGTNPQFDAV-ERTVEAYAIGRVDLDLYGLHVAVDFLAYVRGMRKFDSIDD 295

Query: 294 LKIYMGEDEKKARKILESSYPLSE 317
           L + M  D K++ + L ++Y L+ 
Sbjct: 296 LLVAMAADVKRSSE-LTAAYDLTH 318


>gi|241760883|ref|ZP_04758972.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374502|gb|EER63963.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 314

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 113/304 (37%), Positives = 161/304 (52%), Gaps = 4/304 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS 67
           +  +P+HL G +VA+GNFDG HLGH  ++  A+  A     P+ V +F+PHP        
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAAAVARAHAEGRPVIVATFDPHPVRFFCPDL 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L+   V+TG  F
Sbjct: 67  PPFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLKAAGVVTGRDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK R G   +LQ  G+        I  + + +   +SS+ IR AL +G    AA LL 
Sbjct: 127 TFGKGRKGGVDLLQAMGQSLNISVDTIMPVCDQQG-AISSTRIREALKQGDPETAARLLS 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  
Sbjct: 186 RPFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR 
Sbjct: 246 PSFSPPTEW-LEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARA 304

Query: 308 ILES 311
            L  
Sbjct: 305 CLSE 308


>gi|253573571|ref|ZP_04850914.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847099|gb|EES75104.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 314

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 111/318 (34%), Positives = 180/318 (56%), Gaps = 10/318 (3%)

Query: 1   MHVFH-NIEINQS-LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFN 56
           M   H +  +N+  +  H +  V+AIG FDG+HLGH  +++ A+++A     P +V++F+
Sbjct: 1   METIHLSYPLNERFIEQHARPQVLAIGQFDGLHLGHASVIDSAVRLAGELGLPASVMTFH 60

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+ +++       L+PP  +E+IL +MG   +   +F    +  S + F+  +LV  L
Sbjct: 61  PHPKEVMKKGDYDGYLTPPKEKERILREMGVDYVYIVEFNDAFSRVSPQNFVSGILVP-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +V T + G  FR+G    GD  +L++           +     +  + VSSS IR AL +
Sbjct: 120 QVHTAVVGFDFRYGYRGEGDASMLRELSG-NVLDVHTVPPFLID-GEKVSSSGIRKALQE 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G +  A   LG  +T+   V+HGEK GR LGFPTAN++L+   ++   GVYA+R   +  
Sbjct: 178 GKIELANRWLGRTYTLRGTVMHGEKRGRQLGFPTANLKLAEHYVVPASGVYAVRVTREG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           T+YSGV N G  PT   NG +  LE+ +FDFS EIY +  +V    Y+R E KF  +++L
Sbjct: 237 TTYSGVMNVGVKPTFHENGKIFWLEAHLFDFSGEIYDESLSVELVHYIRAERKFGSLDEL 296

Query: 295 KIYMGEDEKKARKILESS 312
              +G+D + A+++L+ S
Sbjct: 297 IAQIGQDAETAKRLLKDS 314


>gi|56551218|ref|YP_162057.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753147|ref|YP_003226040.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56542792|gb|AAV88946.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552510|gb|ACV75456.1| riboflavin biosynthesis protein RibF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 314

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 4/304 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           +  +P+HL G +VA+GNFDG HLGH  ++  A+   +    P+ V +F+PHP        
Sbjct: 7   DAPIPDHLYGAIVALGNFDGFHLGHQAVVAAAVARGHAEGRPVIVATFDPHPVRFFCPDL 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F L+    + ++ EK G  A    +F+   AN S E+FIQ+ +++ L+   V+TG  F
Sbjct: 67  PPFALTTIPQRARLFEKAGADATFVIRFSEAMANLSPEEFIQQQIIDHLKAAGVVTGRDF 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FGK R G   +LQ  G+        I  + + +   +SS+ IR AL +G    AA LL 
Sbjct: 127 TFGKGRKGGVDLLQAMGQNLNISVDTIMPVCDQQG-AISSTRIREALKQGDPETAARLLS 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
             FT+E  V HG ++GR LGFPTAN+ +   +    G+YA++ R  D     G AN G  
Sbjct: 186 RPFTVEGVVRHGNQVGRQLGFPTANLLMGDYVRPAYGIYAVKGRLPDGRYLDGAANLGIR 245

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           P+  P     LE   FD+  +IY Q   VS   +LRPE KFK ++ L   +GED K AR 
Sbjct: 246 PSFSPPTEW-LEPCFFDWEGDIYDQTIAVSLIAFLRPEQKFKGMDALIQQIGEDCKVARA 304

Query: 308 ILES 311
            L  
Sbjct: 305 CLSE 308


>gi|58581248|ref|YP_200264.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58425842|gb|AAW74879.1| riboflavin biosynthesis protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 398

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 8/321 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            +F ++E     P    G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 63  RLFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLP 119

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +  SAE F+   LV  L  +
Sbjct: 120 REFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMSAEDFVHLALVGRLCAR 179

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD G+L   GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 180 EVWIGPEFRFGHRRGGDIGLLHTLGEQHGFVAGEIAPVHLH-GERISATRIRELLVAGEF 238

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +T + 
Sbjct: 239 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAETPWP 297

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 298 SVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMH 356

Query: 300 EDEKKARKILESSYPLSERDR 320
            D ++AR +L +S      D 
Sbjct: 357 RDAEQARAVLAASPSQEPEDN 377


>gi|158335801|ref|YP_001516975.1| riboflavin biosynthesis protein RibF [Acaryochloris marina
           MBIC11017]
 gi|158306042|gb|ABW27659.1| riboflavin biosynthesis protein RibF [Acaryochloris marina
           MBIC11017]
          Length = 307

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 6/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQS 65
           + +  SL       V+A+GNFDGIH GH  +++  +   ++ + +TV++FNPHP+     
Sbjct: 1   MWVTSSLETVRTPTVIALGNFDGIHQGHCQVIQSLLSNRSDTAQVTVVAFNPHPQAFFSG 60

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 L+P S +  +LE +G   L+   F    AN S + F++ +LV  L+ + +  G 
Sbjct: 61  EHQP-LLTPLSEKATLLENLGVDQLVLIPFDQALANLSPQDFVKDILVAQLQAQFISVGF 119

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F FG  RAG    L     +Y          + N S+ +SSS IR AL +G++  A  +
Sbjct: 120 NFCFGYQRAGTAEDLVAIAGQYQIPVSITAP-QTNGSEPISSSAIREALLEGNLEKAQQM 178

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGVAN 243
           LG  + +   V+ G+++GRTLGFPTAN+Q+       + GVY++   +        GV N
Sbjct: 179 LGRAYDLTGTVVKGQQLGRTLGFPTANLQVPTDKFCPRTGVYSVSVTSNLWSQPQPGVMN 238

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           +G  PT+       LE  + D+S ++YG   TV    +LR E KF  +  LK  +  D +
Sbjct: 239 WGCRPTV-DGQQPSLEVHLLDWSGDLYGHTVTVHLQQFLRSEQKFASLADLKAQIQADCE 297

Query: 304 KARKILES 311
            AR  L +
Sbjct: 298 IARASLAA 305


>gi|238063390|ref|ZP_04608099.1| riboflavin biosynthesis protein ribF [Micromonospora sp. ATCC
           39149]
 gi|237885201|gb|EEP74029.1| riboflavin biosynthesis protein ribF [Micromonospora sp. ATCC
           39149]
          Length = 311

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +   +     P+      V IG FDG+H GH   +   +  A        V++F+PH
Sbjct: 1   MQRWRGYDAT---PDGWGRSAVTIGVFDGVHRGHQATIGHTVARARELGVRSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++E +G   L    FT E +   AE F+  +LVE L  
Sbjct: 58  PAEVVRPGSHPAVLTELGRKAELVEALGVDVLCVVPFTPEFSRLPAEAFVHDILVEHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G+ +GF       L    S + SS+ IR  +  G 
Sbjct: 118 TLVVVGENFRFGHRAAGDVALLERLGQTFGFAVED-APLVAEDSTVFSSTYIRARVDSGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIR-FRTQDQT 236
           V  AA  LG    +E  V+ G++ GR LGFPTAN+   P   +  +GVYA    R + + 
Sbjct: 177 VAAAAAALGRPHRLEGVVVLGDQRGRELGFPTANLLCHPHAAVPADGVYAGWLLRKEGRE 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                 + G NPT        +E+ + DFS ++YG+R  + F  +LR +++F  +E L  
Sbjct: 237 RLPAAISVGTNPTF-SGRERRVEAHVLDFSGDLYGERVALDFAAHLRGQVRFDGVEPLIA 295

Query: 297 YMGEDEKKARKIL 309
            M +D   AR+IL
Sbjct: 296 QMNQDVGLARRIL 308


>gi|114320012|ref|YP_741695.1| riboflavin kinase / FMN adenylyltransferase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226406|gb|ABI56205.1| FMN adenylyltransferase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 322

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 8/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +   +    +L    +G  + IGNFDG+HLGH  +L+           P  +L+F PH
Sbjct: 1   MELVRGL---HNLQPRHRGCALTIGNFDGVHLGHQAMLDTLGLAAQRLGVPPLLLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++       ++P   +   L +     ++  +F    A  SAE F+ ++L+  L V
Sbjct: 58  PLEALRPEQAPTRITPLRDKLAALAETPLQRVVVARFGAALAGMSAEAFVDELLIGRLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG+ R GD  +L +   ++GF    ++ L     + +SS+ +R AL  G 
Sbjct: 118 RHLLIGDDFRFGRARRGDYAMLAEASRRHGFELDRLETLATEDGERISSTRVRAALAAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS 237
           +  A  LLG  +T+   V+ G+ IGR LGF TAN+    +      G++ +         
Sbjct: 178 LGEAEDLLGRPYTLSGRVVRGDAIGRRLGFRTANIAFRANQRPALGGIFTVSVEGVADRP 237

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN G  P +      LLE  + D+   +YG    V F   LR E  F  ++ L   
Sbjct: 238 LPGVANVGTRPAV-GGKRHLLEVHLLDWQGRLYGCHLQVRFLQRLREEWHFDSLDALSAQ 296

Query: 298 MGEDEKKARKILESSYPLSE 317
           +G D  +AR +   + PLS+
Sbjct: 297 IGRDVDQARALFNDN-PLSD 315


>gi|327479528|gb|AEA82838.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           stutzeri DSM 4166]
          Length = 316

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 104/321 (32%), Positives = 153/321 (47%), Gaps = 7/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPRHRGCVATIGNFDGVHRGHQAILARLRERAAELGLPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++L + G   ++   F       SA +F+   LVE L V
Sbjct: 58  PREYFSPDRAPARLTRLREKLQLLSEQGVDLVLCLAFNRRLRELSAAEFVHATLVEGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L K G   GF       +  +  + VSS+ +R  L  G 
Sbjct: 118 RHLEVGDDFRFGCDRAGDFDFLLKAGAAEGFSVEAATTIEVD-GERVSSTRLRQVLADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F I   V+HG+K+GR LG PTAN+QL        GV+ +    +    +
Sbjct: 177 LGCAEALLGRPFAITGRVMHGQKLGRQLGAPTANVQLKRRNTPLSGVFVVTLEVEGNV-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GVAN G  PT+  +G   LE  + D+  ++YG+   V+F   LR E +F  +E LK  +
Sbjct: 236 AGVANIGMRPTVESDGQPHLEVHLLDYQGDLYGRLVQVTFHRKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARKILESSYPLSERD 319
             D   AR    +S  ++ +D
Sbjct: 296 DADIAAARDYWRASSLMTSQD 316


>gi|296139447|ref|YP_003646690.1| riboflavin biosynthesis protein RibF [Tsukamurella paurometabola
           DSM 20162]
 gi|296027581|gb|ADG78351.1| riboflavin biosynthesis protein RibF [Tsukamurella paurometabola
           DSM 20162]
          Length = 320

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 18/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M  +  +     +P      VV IG FDG+H GH  ++ +A         P  +++F+PH
Sbjct: 1   MLRWRGLN---DVPADWGRCVVTIGVFDGVHRGHAQLIARATAEAHERGLPAVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+  + + ++ E++G        FT       AE F+  VLVE L  
Sbjct: 58  PAEVVRPGSHPPQLTTLTRRAELAEELGIDVFCVMPFTATVMAQPAEDFVHSVLVERLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG    G+  +L + G+K+GF    +  L    +   SS+ IR+ +  G 
Sbjct: 118 AAVVVGDNFTFGNRALGNVEMLGRLGQKFGFSVDSV-PLLTEHAVTYSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD--- 234
           V  AA  LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 VKAAAEALGRPHRVEGVVVRGDGRGRELGFPTANVAPPMFAAIPADGVYAAWFTVLGAGP 236

Query: 235 -------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT        +E+F+ D S ++YGQ   V F + +R   +
Sbjct: 237 VVGQVTPGERYPAAVSVGSNPTF-SGRTRTVEAFVLDTSADLYGQHVAVDFVERVRGMER 295

Query: 288 FKDIEKLKIYMGEDEKKARKIL 309
           F+ I+ L   MG D ++ R IL
Sbjct: 296 FESIDDLLTAMGGDVERTRAIL 317


>gi|269127532|ref|YP_003300902.1| riboflavin biosynthesis protein RibF [Thermomonospora curvata DSM
           43183]
 gi|268312490|gb|ACY98864.1| riboflavin biosynthesis protein RibF [Thermomonospora curvata DSM
           43183]
          Length = 313

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 13/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +H ++    +P      VV IG FDG+H GH  I+  A ++A    +    ++F+PH
Sbjct: 1   MVRWHGLD---EVPADWGRSVVTIGVFDGVHRGHQRIVGAAAELARRRGLRSVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    LS    + ++LE++G   +I   FTLE +    ++F+Q VLV+ L  
Sbjct: 58  PDEVVRPGTHPPLLSSTRRRAELLEELGTDVVILLPFTLELSRMGPDEFVQSVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             VI G  FRFG    GD  +L++ G+KY F    +  + +   + +SS+ IR  L  G 
Sbjct: 118 AHVIVGEDFRFGHKARGDVALLRELGDKYDFTAEGMPLVAD--GETISSTLIRRQLAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYA----IRFRTQ 233
           V  AA  LG    +E  V+ G + GR LGFPTAN++    + +  +GVYA          
Sbjct: 176 VAGAAKALGRPHRVEGVVVRGHQRGRALGFPTANLETMTHMAIPADGVYAGFLICDSERY 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIE 292
               +    + G NPT    G   +E++  D    ++YG+   V F   +R  +KF+ +E
Sbjct: 236 PNFRWPAAISIGTNPTFEGAGERTVEAYALDRDDLDLYGEHMAVDFTARIRDTLKFESVE 295

Query: 293 KLKIYMGEDEKKARKI 308
            L   M  D  +AR++
Sbjct: 296 ALVEEMHRDVARAREL 311


>gi|325003062|ref|ZP_08124174.1| riboflavin biosynthesis protein RibF [Pseudonocardia sp. P1]
          Length = 329

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 92/322 (28%), Positives = 153/322 (47%), Gaps = 9/322 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +  +E   ++P      VV +G FDG+H GH  ++ +A++       P  V++F+PH
Sbjct: 1   MQRWRGLE---AVPPGWGRCVVTVGVFDGVHRGHRQLIARAVELARDRGLPAVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    LS    + +++ + G        FT + +  +   F  ++LV+ L  
Sbjct: 58  PAELVRPGTHPARLSTLDRRAELVAEAGADVFCVIPFTEQLSRMAPAGFAHEILVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG   AGD   L + G ++GF    +D L ++     SS+ IR+ +  G 
Sbjct: 118 AVVVVGRNFTFGHKAAGDVTTLHELGRRFGFVCEAVD-LISDDHITFSSTYIRSCIDAGA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V +AA  LG    ++  ++HG K GR LGFPTAN+   P   +  +GVYA  FR  D   
Sbjct: 177 VRDAARALGRWHRVDGVIVHGHKRGRDLGFPTANVACPPHTAVPADGVYAGWFRIGD-RR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
                + G NPT        +E+++ D  ++ YG    V F   LR +  +  IE L   
Sbjct: 236 LKSAISVGTNPTF-SGRVRTVEAYVLDVDEDFYGHEVGVEFVARLRGQEHYDGIEPLIAQ 294

Query: 298 MGEDEKKARKILESSYPLSERD 319
           M  D + +R  L ++   +  D
Sbjct: 295 MTRDVEDSRTTLVAAGDATGPD 316


>gi|218898961|ref|YP_002447372.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9842]
 gi|218540891|gb|ACK93285.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9842]
 gi|326941575|gb|AEA17471.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 323

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 162/320 (50%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S   +
Sbjct: 297 EQIAKDKKTAQEYFASEKNI 316


>gi|147762|gb|AAA24605.1| protein X (gene x) [Escherichia coli]
          Length = 312

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 11/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I      P   +G V+ IGNFDG+H GH  +L+   +     N P+ V+ F P 
Sbjct: 1   MKLIRGIHNLSQAPQ--EGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQ 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    + + L + G   ++  +F    A  +A+ F+  +LV+ L V
Sbjct: 59  PLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFVSDLLVKHLRV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTK 176
           K +  G  F      A     +     K  ++T  I  +R   ++    S++ +R AL  
Sbjct: 119 KFLAVGDDFPL----ALVVKAISCYYRKLAWNTASISPVRKLFAEVACASAARLRQALAD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            ++  A  LLG+ F I   V+HG+++GRT+GFPTAN+     +   +GVYA+      + 
Sbjct: 175 DNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPPRRQVSPVKGVYAVEVLGLGEK 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN G  PT+       LE  + D + ++YG+   V     +R E +F  +++LK 
Sbjct: 235 PLPGVANIGTRPTVAGI-RQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKA 293

Query: 297 YMGEDEKKARKILESSYP 314
            +  DE  AR+    + P
Sbjct: 294 QIARDELTAREFFGLTKP 311


>gi|51244946|ref|YP_064830.1| riboflavin kinase (FAD synthetase) [Desulfotalea psychrophila
           LSv54]
 gi|50875983|emb|CAG35823.1| related to riboflavin kinase (FAD synthetase) [Desulfotalea
           psychrophila LSv54]
          Length = 324

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI---KIANNSPITVLSFNP 57
           M +F +I     +        V IGNFDG+HLGH  +  + +   +         ++F+P
Sbjct: 1   MQIFTDI---TQIKQCFTNACVTIGNFDGVHLGHQKLFNEVLHRARARRGGTSVAITFDP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP ++++    I  +S    + +++E+ G   L+   F+ E A  +AE F+ ++L+  L 
Sbjct: 58  HPLSVLRPE-GIQLISTMEQKLELVEQAGVDILLLIPFSKEFAKTTAEYFVDEILLGCLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +  ++ G  + FGK RAG+   L+  GE+YGF    +D       + VSS+ IR  +T G
Sbjct: 117 IVELVVGYDYAFGKGRAGNIDFLRIEGERYGFPVTVVDAF-YESGEPVSSTRIRKLITAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ 235
            V  AA L+G  + I   V HG K  G  LGFPTAN+ L+ + L+   GVY +     D 
Sbjct: 176 DVAKAATLMGRNYQIRGKVQHGVKRGGSQLGFPTANLSLNKEYLIPHFGVY-VAQIIYDG 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +Y+GV N GRNPT   N  L+ E  IFDF++EIYG+   ++   +LR E+ F DI  L 
Sbjct: 235 HTYNGVLNVGRNPTFPEN-KLVAEVHIFDFNKEIYGKHIKINLLQFLRGEVSFPDIASLA 293

Query: 296 IYMGEDEKKARKILESSYP 314
             +  D    + IL     
Sbjct: 294 KQIEADIALTKAILAEQQH 312


>gi|303325604|ref|ZP_07356047.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. 3_1_syn3]
 gi|302863520|gb|EFL86451.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. 3_1_syn3]
          Length = 311

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 101/314 (32%), Positives = 169/314 (53%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M + H+++        L G  V IGNFDG+H GH  ++ + + +         +++F PH
Sbjct: 5   MQLVHSVDGL----GSLTGASVTIGNFDGVHKGHQALIRRTLDVCRQDDLACVLVTFWPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++    P   L+    + ++L  +G   ++   FT E A  + E+F+++ L+  + +
Sbjct: 61  PRLVVSPHKPHAPLTSRERRLELLAGLGVEHVLELPFTQELAALTPEEFVRRYLLP-MHL 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F  G+ R+G   +L+  G  +GF    +  +  + +  VSS+ +R  +++G 
Sbjct: 120 RRLVVGYDFSLGRGRSGHAEVLRSLGADWGFAVEQLPPVIVDDAV-VSSTRLRDLISRGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA LLG  +    +V+HGE  G  LGFPTAN+     +L  EGVYA R R  D+T +
Sbjct: 179 VWQAARLLGRCYGFSGEVVHGEGRGGGLGFPTANLLPPETLLPAEGVYAARVR-LDETWH 237

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V N GR PT      + +ESF+ D S ++YG+R  + F   LR E +F  +E+L   +
Sbjct: 238 QAVTNVGRKPTF-GGRDVTVESFLLDTSADLYGRRVRLEFVARLRGERRFASVEELTRRI 296

Query: 299 GEDEKKARKILESS 312
           GED  +AR+ILE +
Sbjct: 297 GEDVAEARRILEKA 310


>gi|158313039|ref|YP_001505547.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia sp.
           EAN1pec]
 gi|158108444|gb|ABW10641.1| riboflavin biosynthesis protein RibF [Frankia sp. EAN1pec]
          Length = 309

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +  +E   ++P+   GG++ IG FDG+HLGH  I+ +A+++A        V++F+PH
Sbjct: 1   MRRWRGVE---NIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+    + ++LE +G  AL    FTL+ +  +AE F+ +++   L  
Sbjct: 58  PAEVLRPGTHPALLTTLRHKAELLEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F +G    G+   L + G   GF    I  +  ++ Q++SS+ IR  +  G 
Sbjct: 118 TGVVVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADE-QVLSSTAIRRRVADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG    +E  V+HG+  GR +G+PTAN+Q +P   +  +GVYA   R   Q  
Sbjct: 177 VEGAAAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +   + G NPT        +E+F+ DF  ++YG+     F   LRP ++F  +++L + 
Sbjct: 237 -AAAISIGTNPTF-EGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQ 294

Query: 298 MGEDEKKARK 307
           M  D    R 
Sbjct: 295 MARDVDATRA 304


>gi|255067969|ref|ZP_05319824.1| riboflavin biosynthesis protein RibF [Neisseria sicca ATCC 29256]
 gi|255047746|gb|EET43210.1| riboflavin biosynthesis protein RibF [Neisseria sicca ATCC 29256]
          Length = 317

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 110/311 (35%), Positives = 166/311 (53%), Gaps = 15/311 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTII---QS 65
            + P+  +G  V IGNFDG+HLGH  IL++      + N P+ V+ F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLKNEADSRNLPVIVVIFEPQPKEFFSQKAG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +L   G   A+   +F  E A+ SA+ FI K+L + L  + ++ G
Sbjct: 68  FTPPCRISPLRTKLDLLSDTGCIDAVWVLRFNQEFADMSAQDFIDKLLRQTLNTRYLLIG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L+++ +     T  V ++++R       SS+ +R ALT G++  A
Sbjct: 128 DDFRFGAGREGCFDLLKQQSDIQTERTPSVIVEDIRT------SSTAVREALTDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGKVKHGKKLGRTINAPTANIQLPPHRYPLRGVFVVEADGTFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+  N    LE  +FDF   +YGQR  V F   LR E KF DIE LK  + +D 
Sbjct: 241 SFGLNPTVSSNNSQKLEVHLFDFEGNLYGQRLKVRFLHKLRDEQKFSDIEALKRQIEQDI 300

Query: 303 KKARKILESSY 313
           ++A++  E+ Y
Sbjct: 301 EEAKQWQETDY 311


>gi|254517163|ref|ZP_05129221.1| riboflavin biosynthesis protein RibF [gamma proteobacterium NOR5-3]
 gi|219674668|gb|EED31036.1| riboflavin biosynthesis protein RibF [gamma proteobacterium NOR5-3]
          Length = 317

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 6/314 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   ++   SL    +  V  IG FDG+HLGH  ++ Q  +  +    P TV++F P 
Sbjct: 1   MELLRGLK---SLRPQHRPSVATIGAFDGVHLGHQTVVAQLAEQGHKYDLPTTVVTFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  + +++    L     + + L  +G   L+  +F       SA QF  ++ V+ L V
Sbjct: 58  PREYLAAATAPARLQSFRERLEALAALGVDRLLCLRFDENLRRMSAAQFADEIFVKGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G  FRFG DR G   ++Q  GE+ GF T+    L   +   +SS+ +R AL  G 
Sbjct: 118 RSLVLGDDFRFGHDREGGFSLMQAIGEREGFETLATRTL-EFEGDRISSTRLRNALAIGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
            + A+  LG  + I   VI G ++GR +G PTAN+ L    +   GV+A+          
Sbjct: 177 FVTASACLGRDYEISGRVIFGRQLGRQIGTPTANIALRRGSVPLSGVFAVTVSGAGLCDA 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             +AN G  PT+       LE  I D    +YG+R  V F   LR E +F+ ++ LK  +
Sbjct: 237 MAIANVGVRPTVSAGSRPNLEVHILDGEHALYGERLQVRFLHKLREEQRFESVDLLKAQI 296

Query: 299 GEDEKKARKILESS 312
            ED   AR    SS
Sbjct: 297 QEDIDGARSWFASS 310


>gi|227329318|ref|ZP_03833342.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 281

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 3/281 (1%)

Query: 37  ILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
           +LE+  +   A   P+ V+ F P P  +  +      L+    + K L + G   L+  +
Sbjct: 2   LLERLKQEGRARGLPVMVMIFEPQPLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVR 61

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           F    A   AE F+  +LV+ L  K ++ G  FRFG  R GD  +LQK G + GF  +  
Sbjct: 62  FDARFAANDAETFVSSLLVKKLGAKFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVIST 121

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ 214
           D    N  + VSS+ +R AL++  +  A  LLG+ ++I   V HG+++GRT+GFPTAN+ 
Sbjct: 122 DSFC-NGGKRVSSTAVREALSRDELELAESLLGHPYSISGRVEHGKELGRTIGFPTANLP 180

Query: 215 LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRC 274
           L   +    GVYA+      Q    GVAN G  PT+  +    LE  + D +  +YG+  
Sbjct: 181 LKRQVSPVSGVYAVSVYGLGQEPLPGVANIGTRPTVNGDKRQQLEVHLLDVTMNLYGRHI 240

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            V     +R E +F  ++ LK  + +D   AR       P+
Sbjct: 241 EVVLRKKIRNEQRFASLDALKQQIADDVVTARTFFGLKTPV 281


>gi|120553793|ref|YP_958144.1| riboflavin biosynthesis protein RibF [Marinobacter aquaeolei VT8]
 gi|120323642|gb|ABM17957.1| FMN adenylyltransferase / riboflavin kinase [Marinobacter aquaeolei
           VT8]
          Length = 322

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 155/319 (48%), Gaps = 10/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVL 53
           M +   +   + +          G V  IGNFDG+H GH  I++Q    A   N P  V+
Sbjct: 1   MRLIRGLTNLKRIAGSADSPLADGCVATIGNFDGVHRGHKTIIDQVRGKAQALNLPSVVM 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            F P P+   + +     L P   + + L   G   ++  +F     +YS   FI+ VL+
Sbjct: 61  IFEPQPQEFFKGAEAPPRLMPFRQKFEALLGEGVDVVLCIRFDETFRSYSGMGFIEDVLI 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L V+ ++ G  FRFG DRAGD  +LQ  G++ GF       +  +  + VSS+ +R A
Sbjct: 121 HGLGVRHLVVGDDFRFGCDRAGDFRLLQSVGQERGFTVENTRTVVVD-GERVSSTRVRNA 179

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L    +  A  LLG+ + I   V++G ++GR +G PTAN+ L   +    GVY +R R  
Sbjct: 180 LNVNGLEEAERLLGHPYRIHGRVVYGRQLGRQIGAPTANILL-HQMPALRGVYVVRARLD 238

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                 GVAN G  PT+       LE  +FDF+  +YGQ   V F   LR E+KF  +++
Sbjct: 239 TGEWRDGVANIGLRPTV-DGKRPSLEVHLFDFAGTLYGQHLEVVFRHGLRDEVKFDSVDE 297

Query: 294 LKIYMGEDEKKARKILESS 312
           L+  +  D + AR  L  +
Sbjct: 298 LRQQIARDFEHARAWLAEN 316


>gi|222056460|ref|YP_002538822.1| riboflavin biosynthesis protein RibF [Geobacter sp. FRC-32]
 gi|221565749|gb|ACM21721.1| riboflavin biosynthesis protein RibF [Geobacter sp. FRC-32]
          Length = 319

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 166/315 (52%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +  ++     +   L   VV +GNFDG+HLGH  I  +  K A +S     V++F PH
Sbjct: 1   MRIIKDL---SRITEPLTNAVVTVGNFDGVHLGHREIFRKVKKAAADSGGVSVVVTFIPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++  + +E ++E  G   L+   F  + A+ +A  F+  +LV  L +
Sbjct: 58  PLKVLAPQKSPQLINTYAEKETLIEASGIDYLVEIAFDHQFASTTARDFVANILVGKLGM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G  + FG++R G+  +L   G+++ F    +  + +N S I SS+ IR  +  G 
Sbjct: 118 SKLIIGYDYAFGRNREGNVSLLTLLGDEFSFKVEELKPI-SNGSTIFSSTAIRKMIASGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     LLG  F++   V+HG   G+ LGFPTAN++   ++L K+GVYA++ +  D   Y
Sbjct: 177 VKGVVPLLGRHFSVGGTVVHGHHRGKGLGFPTANLETEKELLPKDGVYAVKVKV-DGVFY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G  N G NPT   N  L +E F+FDF  ++Y +   V F D +R E  F D+  L+  +
Sbjct: 236 AGACNIGTNPTF-KNHALSVEVFLFDFEGDLYQKEIRVYFIDRIRDEKSFADVSSLQQAI 294

Query: 299 GEDEKKARKILESSY 313
            +D ++ R IL  ++
Sbjct: 295 ADDIQRCRDILSKAF 309


>gi|330818071|ref|YP_004361776.1| Riboflavin kinase/FAD synthetase [Burkholderia gladioli BSR3]
 gi|327370464|gb|AEA61820.1| Riboflavin kinase/FAD synthetase [Burkholderia gladioli BSR3]
          Length = 330

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 148/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    AN + E F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRENGVDRVVVEHFNHTFANQAPEAFVEQTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  F +G  RAG+   LQ+ G ++GF    +  L       +SSS +R +L  G 
Sbjct: 117 RWMIVGDDFCYGARRAGNFASLQEAGARHGFDVEQMATLAAPNGARISSSGVRASLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG+ + I   V HG K+GR LGFPT N+ ++       G++ +      +   
Sbjct: 177 LDAAKQALGHGYAISGHVAHGLKLGRDLGFPTLNLSIAHKRPALSGIFVVLVHGLGEKPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+V  G +LLE  I D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PAVASLGVRPTVVDAGRVLLEVHILDWHGDAYGKLVRVEFLKKLRDEAKFIDLETLTRAI 296

Query: 299 GEDEKKARKILES 311
            +D    R    +
Sbjct: 297 AQDVVDTRAYFAA 309


>gi|49476007|ref|YP_034048.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bartonella
           henselae str. Houston-1]
 gi|49238815|emb|CAF28095.1| Riboflavin biosynthesis protein ribf [Bartonella henselae str.
           Houston-1]
          Length = 322

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 197/325 (60%), Gaps = 21/325 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
           LP   KG V+A+GNFDG+H GH ++L++A+      N P  VL+F PHPR+  Q S+PI 
Sbjct: 2   LPLVWKGAVLALGNFDGVHCGHQVVLQKALDLARMRNKPALVLTFEPHPRSFFQHSAPID 61

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+    + +I + +GF+ +I   F    A  SA++FI  +L +  EV  V+TG  F+FG
Sbjct: 62  RLTEAPEKAEIFKILGFNGVIEQPFDAHFAALSADEFINVILKKAFEVSVVVTGENFQFG 121

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-----------NIRTALTKGHV 179
           + ++G+  +L ++GE++GF  V I          VSS+            IR  L++G V
Sbjct: 122 RQKSGNSRLLCQKGEEWGFEVVQIP--------CVSSAPNSQSVIISSSVIRKLLSQGQV 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             AA LLGY + + S++I GE++GR LGFPTAN  L P   L  GVYA+R R  +   Y 
Sbjct: 174 EKAARLLGYHYRVRSNIIQGEQLGRLLGFPTANQILPPQASLAYGVYAVRLRRANGVLYD 233

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVA+FG  PT+V N    LE+++FDF+ ++YG+ CTVSFF +LR + KF  +E L   M 
Sbjct: 234 GVASFGCRPTVVKNAAPFLETYLFDFNGDLYGENCTVSFFQFLRKQEKFDGLEPLIAQMH 293

Query: 300 EDEKKARKILESSYPLSERDRIICF 324
            D+KKA+ IL +  PLS+ D+++ F
Sbjct: 294 HDKKKAKAILAAVQPLSQLDQLLTF 318


>gi|90416601|ref|ZP_01224532.1| hypothetical protein GB2207_05347 [marine gamma proteobacterium
           HTCC2207]
 gi|90331800|gb|EAS47028.1| hypothetical protein GB2207_05347 [marine gamma proteobacterium
           HTCC2207]
          Length = 311

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 102/305 (33%), Positives = 153/305 (50%), Gaps = 4/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           +    +L    +  VV IG+FDG+H+GH  IL Q  + +     P   ++F P P+    
Sbjct: 4   VRGLHNLQTPDEKSVVTIGSFDGVHIGHQAILRQVKEASQRLQLPSVAMTFEPQPKEYFS 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +      L     +   L ++G  +++  +F     N SA  FI +VLV  L V+ +I G
Sbjct: 64  AEQAPARLMRLREKIDTLLELGVDSVVCLQFNRRLRNLSAADFIDQVLVRGLAVRHLIVG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG DR+GD   LQ++GE+ GF       +   + Q VSS+ +R  + +     AA 
Sbjct: 124 DDFHFGCDRSGDFARLQQKGEQCGFDVHDTATV-EVEGQRVSSTLVREVVEQADFPRAAA 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  F+I   V +G+++GR LGFPTAN+QL        GV+A++      T Y G AN 
Sbjct: 183 LLGRPFSISGVVGYGQQLGRELGFPTANVQLCRFSAPLSGVFAVQVNVAG-TLYRGAANV 241

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+      +LE  + DF+ ++YGQR  V F   +R E KF  +EKL   +  D   
Sbjct: 242 GLRPTVGDLVKPILEVHLLDFAGDLYGQRIAVEFLHKIRDEEKFTTVEKLVETITADINI 301

Query: 305 ARKIL 309
            R+  
Sbjct: 302 IRQWF 306


>gi|295132329|ref|YP_003583005.1| riboflavin kinase / FAD synthetase [Zunongwangia profunda SM-A87]
 gi|294980344|gb|ADF50809.1| riboflavin kinase / FAD synthetase [Zunongwangia profunda SM-A87]
          Length = 312

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 179/317 (56%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +       +S     K  VV IG FDG+H GH  I+++ +    ANN    +L+F PH
Sbjct: 1   MEIHKGASAFKS----DKPTVVTIGTFDGVHAGHQKIIKRLVDSARANNLESVILTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S I  ++    +  ILE+ G   L+ + FT++ +  +A +F++++LVE L  
Sbjct: 57  PRMVLQKESGIKLINTIEERTDILEQSGIDHLVIHPFTMQFSRLTAREFVKEILVEKLRA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G   RFG++R  +   L+K GE++ F    I   ++ +   VSS+ IRTAL +G 
Sbjct: 117 KKVIIGYDHRFGRNRTANINDLKKFGEEFDFEVEEI-TRQDIEEVAVSSTKIRTALEEGR 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQT 236
           V  A + L + F+++ +V+ G  +G+   +PTAN+ ++ D  ++ K GVY +R   + +T
Sbjct: 176 VEKANNYLRHPFSLKGEVVKGRGLGKEFNYPTANINIAEDYKLIPKNGVYVVRSVIEGET 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ + G NPT+       +ESF F   +++YG+R  +     +R E KF  +E+LK+
Sbjct: 236 -YFGMMSIGTNPTV-GGTSRTIESFFFKLDKDLYGKRLKIDLLIRIRDEKKFNSVEELKL 293

Query: 297 YMGEDEKKARKILESSY 313
            M +DE  +++ ++ +Y
Sbjct: 294 AMKQDEAFSKQYIKDNY 310


>gi|313638083|gb|EFS03352.1| riboflavin biosynthesis protein RibF [Listeria seeligeri FSL
           S4-171]
          Length = 314

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEE 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|238898019|ref|YP_002923699.1| bifunctional flavokinase; FAD synthetase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465777|gb|ACQ67551.1| bifunctional: flavokinase; FAD synthetase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 314

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 93/311 (29%), Positives = 148/311 (47%), Gaps = 7/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M     +    ++     G V++IGNFDG+H GH  +L +        + P  V+ F P 
Sbjct: 1   MKFIRGL---HNIRPENHGCVLSIGNFDGVHRGHQALLARLKHEGQKRHLPTMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            L+    + K L ++    ++  KF    A Y+A+ FI + L++ L V
Sbjct: 58  PLEFFSPEKAPPRLTYLRDKLKYLSQIKIDYVLCVKFDPSFAAYTADDFIAEFLIKQLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  FRFGK R G+  +L +  +K  F  + I+     K   +SS+ IR AL K  
Sbjct: 118 HLLVVGDDFRFGKKRQGNIKLLTQASKKIDFQIISIEGFFY-KRLRISSTVIREALQKDQ 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ + I   ++HG+K+GRTLGFPT N+ +    +  +GVY +          
Sbjct: 177 LALAEDLLGHPYCISGRIVHGDKLGRTLGFPTLNLPVKSSRMPVQGVYVVEVYGLTYEVL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+       ++  + DFS E+YG+   + F   LR E +F  ++ L+  +
Sbjct: 237 PGVANIGSRPTI-SGTCHQIDVHVLDFSMEVYGRYVDIVFRQKLRNEQRFTSLDALRQQI 295

Query: 299 GEDEKKARKIL 309
             D   AR   
Sbjct: 296 SLDVLAARTFF 306


>gi|326443788|ref|ZP_08218522.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
          Length = 314

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 12/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELSVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  A++   FT   +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDAVLILPFTAGFSQLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
             V+ G  FRFG   AG    L + G  Y +    +D   +      Q  SS+  R  + 
Sbjct: 118 CLVVEGPNFRFGHRAAGTVDFLAELGTSYDYAVEVVDLYVSGAAGGGQPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA    T D
Sbjct: 178 QGDVAGAAEILGRPHRVEGIVVRGAQRGRELGYPTANVETLPHTAIPADGVYAGWL-TAD 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
                   + G NP         +E++  D    ++YG    V F  Y+R + KF  +++
Sbjct: 237 GERMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGQQKFASVDE 295

Query: 294 LKIYMGEDEKKARKI 308
           L + M +D K+ R++
Sbjct: 296 LLVAMADDVKQCREL 310


>gi|313608976|gb|EFR84722.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           F2-208]
          Length = 317

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 170/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 24  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 84  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 142

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 143 TDLAQYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 200

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 201 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 259

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 260 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTRAYFAN 314


>gi|227114257|ref|ZP_03827913.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 281

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 3/281 (1%)

Query: 37  ILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
           +LE+  +   A   P+ V+ F P P  +  +      L+    + K L + G   L+  +
Sbjct: 2   LLERLKQEGRARGLPVMVMIFEPQPLELFAAEKAPARLTRLRDKVKYLAQAGVDYLLCVR 61

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           F    A   AE F+  +LV+ L VK ++ G  FRFG  R GD  +LQK G + GF  +  
Sbjct: 62  FDARFAANDAETFVSSLLVKKLGVKFLVVGDDFRFGAGRQGDFLLLQKAGRESGFDVIST 121

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ 214
           D    N  + VSS+ +R AL++  +  A  LLG+ ++I   V HG+ +GRT+GFPTAN+ 
Sbjct: 122 DSFC-NDGKRVSSTAVREALSRDELELAESLLGHPYSISGRVEHGKALGRTIGFPTANLP 180

Query: 215 LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRC 274
           L   +    GVYA+      Q    GVAN G  PT+  +    LE  + D +  +YG+  
Sbjct: 181 LKRQVSPVSGVYAVSVYGLGQEPLPGVANIGTRPTVNGDKRQQLEVHLLDVTMNLYGRHI 240

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            V     +R E +F  ++ LK  + +D   AR       P+
Sbjct: 241 EVVLRKKIRNEQRFASLDALKQQIADDVVTARTFFGLKTPV 281


>gi|126666690|ref|ZP_01737667.1| hypothetical protein MELB17_19591 [Marinobacter sp. ELB17]
 gi|126628735|gb|EAZ99355.1| hypothetical protein MELB17_19591 [Marinobacter sp. ELB17]
          Length = 326

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 10/319 (3%)

Query: 1   MHVFHNIEINQSLPNH-----LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVL 53
           M +   +   ++L         +G V  +GNFDG+H GH  ILEQ       +N P  V+
Sbjct: 1   MRLIRGLTNLKTLSQSGEGPLARGCVATVGNFDGVHRGHQAILEQVKTQAAKHNLPSVVV 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            F P P+   +       L+    + + L   G  A++  +F  +   +SA  F+  +L+
Sbjct: 61  IFEPQPQEFFRGVDAPPRLTGFRQKVEALRGQGIDAVLCLRFDEQFRQFSAWGFVDSLLI 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L VK ++ G  FRFG DR+GD   L+K G   GF       +   +   VSS+ IR  
Sbjct: 121 QGLAVKHLVVGDDFRFGCDRSGDFNFLEKVGADAGFTVENTRTVVI-EGDRVSSTRIRKL 179

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L    + +A H LG+++ I   +++G ++GR +G PTAN++L+  I    GVY ++ R  
Sbjct: 180 LADNQLDSAEHFLGWKYHIAGRIVYGRQLGREIGAPTANIRLA-QIPALRGVYVVKVRLA 238

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D T + G+AN G  PT+       LE  +FD++  +YGQR  V+F   LR E++F+ +  
Sbjct: 239 DGTLHDGIANIGLRPTV-DGKHPALEVHLFDYAGMLYGQRLDVTFHHGLRDEVRFESVGA 297

Query: 294 LKIYMGEDEKKARKILESS 312
           LK  + +D   AR+ L  S
Sbjct: 298 LKTQIAKDFSSARRWLAES 316


>gi|115523431|ref|YP_780342.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisA53]
 gi|115517378|gb|ABJ05362.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris BisA53]
          Length = 327

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 111/308 (36%), Positives = 162/308 (52%), Gaps = 5/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I  +       +G VVA+GNFDG+H GH  ++   +++A     P   ++F PHPR    
Sbjct: 12  IRDDTPASAIPRGAVVAMGNFDGVHRGHRAVINACLEMARIHKQPAFAVTFEPHPRAFFN 71

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            + P F L+    + ++L   G   ++   F    A   AE FI+  L   L V  V  G
Sbjct: 72  PAKPEFWLTDVEGKMRLLAGAGLDGVVLLSFDATRAGTPAEDFIRNELHRRLGVSGVAVG 131

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FGK R G   +L     K G     +    +     VSSS IR AL++G + +A H
Sbjct: 132 YDFHFGKGRGGSPSLLASEAPKLGIEVD-VQPHIDFGDHPVSSSAIRIALSEGRIKDATH 190

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +L   + +  +VIHG K GR LG+PTAN++L P+  LK+G+YA+R           VANF
Sbjct: 191 MLTAPWFVSGEVIHGAKRGRELGYPTANIRLDPNCGLKQGIYAVR-VGLGGQKIDAVANF 249

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           GR PT   NG  LLE F+FDF  ++YGQ+  V+F D++R E KF  +E+L   M +D  +
Sbjct: 250 GRRPTF-DNGAPLLEVFLFDFQGDLYGQKLDVAFIDFIRAEAKFASVEELIAQMNDDSIR 308

Query: 305 ARKILESS 312
           A+  L ++
Sbjct: 309 AKTALAAA 316


>gi|291009322|ref|ZP_06567295.1| riboflavin kinase / FMN adenylyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 320

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 18/319 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSP 68
           + LP      VV IG FDGIH GH  ++  A+        P  +++F+PHP  +++  S 
Sbjct: 2   EQLPGGWGRCVVTIGVFDGIHRGHQQLITHAVQRARRRGLPCVLMTFDPHPAEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++ E++G        FT E +   A+QF+ +VLVE L    V+ G  FR
Sbjct: 62  PAQLTTLRRRAELAEQLGVDVFCVLPFTQEVSRIPADQFVHEVLVERLHAAVVVVGENFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELR-------NNKSQIVSSSNIRTALTKGHVLN 181
           FG   AGD   L++ GE++GF       L        ++ S   SS+ IR+ +  G V+ 
Sbjct: 122 FGHKAAGDITALEQLGERFGFEVETDALLTGPAERDGDDGSVTFSSTYIRSCIDAGDVVA 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD-ILLKEGVYAIRFRT------Q 233
           AA  LG    +E  V+ G   G   LGFPTAN+       +  +G+YA  F        +
Sbjct: 182 AASALGRYHRLEGIVVRGAGRGGKELGFPTANLNTPAYAAIPADGIYACWFTHRLRGAAE 241

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              +     + G NPT        +E+F+ D   + YG++  + F   LR +++F   + 
Sbjct: 242 PGPALPAAVSVGSNPTF-SGTERTVEAFVLDIDADFYGEQVDLDFVRRLRGQVRFDSADA 300

Query: 294 LKIYMGEDEKKARKILESS 312
           L   M  D  + R+IL + 
Sbjct: 301 LIEQMHRDVDEVREILRAD 319


>gi|289434610|ref|YP_003464482.1| riboflavin biosynthesis protein RibF [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|68166032|gb|AAY87950.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|289170854|emb|CBH27396.1| riboflavin biosynthesis protein RibF [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 314

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|148259599|ref|YP_001233726.1| riboflavin biosynthesis protein RibF [Acidiphilium cryptum JF-5]
 gi|146401280|gb|ABQ29807.1| FMN adenylyltransferase / riboflavin kinase [Acidiphilium cryptum
           JF-5]
          Length = 309

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 110/311 (35%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           + VFH+      +P   +G  VA+GNFDG+H GH  +L  A     ++P   L+F PHPR
Sbjct: 2   IRVFHDW---SGIPPEARGASVALGNFDGMHRGHVEVLRAAHAARPDAPRAALTFAPHPR 58

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +   P F L   + +   LE  G   L    F    +  SAE FI++VL   +    
Sbjct: 59  EFFRPDDPPFRLMLEAERAAALEAEGIEILYELTFDRAFSLLSAEAFIEEVLDRGIGAAH 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FG  R GD  +L+   E  G     +  L ++    +SSS IR  L  G+  
Sbjct: 119 LACGADFAFGHRRGGDVAMLRAAAEARGIGLSIVPHL-DDAEGPISSSRIRRLLQDGYPE 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG    I   V HG+  GRT+GFPTAN+ L   +    GVYA+  R  D     G
Sbjct: 178 RAAALLGRPHAIRGVVAHGDARGRTIGFPTANVALGRHLEPARGVYAVTVRLADGRMVKG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN GR PT+       LE+ +FDFS ++YGQ  TVS   ++R E +F   ++L+  +  
Sbjct: 238 VANIGRRPTVAEGAISRLEAHLFDFSGDLYGQEITVSLHRFIRDERRFASFDELRAQIAA 297

Query: 301 DEKKARKILES 311
           D  +AR++L +
Sbjct: 298 DADEARRLLAT 308


>gi|320008223|gb|ADW03073.1| riboflavin biosynthesis protein RibF [Streptomyces flavogriseus
           ATCC 33331]
          Length = 317

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           MH +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MHCWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+P   + +++  +G  A++   FT   +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGTHPPLLAPHQRRAELMAGLGVDAVLILPFTAAFSQLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K VI G  FRFG   AGD   L + G  Y + T  ID   +      +  SS+  R  + 
Sbjct: 118 KLVIEGPNFRFGHRAAGDVTFLTELGATYDYGTEVIDLYVSGEAGGGEPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++ L    +  +GVYA       
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHSAIPADGVYAGWLTVNG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R  +KF+ I+ 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMLKFESIDD 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D K++ +++E+
Sbjct: 296 LLVAMAADVKRSSELIEA 313


>gi|158522245|ref|YP_001530115.1| riboflavin biosynthesis protein RibF [Desulfococcus oleovorans
           Hxd3]
 gi|158511071|gb|ABW68038.1| riboflavin biosynthesis protein RibF [Desulfococcus oleovorans
           Hxd3]
          Length = 317

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V   ++   SL    +  VV IGNFDG+H GH  +  +  + A         ++F PH
Sbjct: 8   MRVVEGLD---SLEGPFERAVVTIGNFDGVHKGHQALFARVKEKAREIGGTAVAVTFEPH 64

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++  ++P    ++    + +++   G  AL+   F++  A   A  F++ +L+  + 
Sbjct: 65  PAKVLHPNTPAPPRITLYEQKAELIAANGIDALVCIPFSMVFAALGAMAFLKDILIHRIG 124

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTK 176
           +K ++ G  + FGK R G+   L+K  ++ GF  +    +        +SS+ +R  +  
Sbjct: 125 MKAIVVGRDYTFGKHREGNVDFLEKHAQELGFEVICEPWVDTVPGHGRISSTTVRKTVMA 184

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLG  + +   V+ G   G + LGFPTAN+ L+ ++    GVYA+       
Sbjct: 185 GDVAVAFDLLGRYYQVRGTVVSGRGRGGSALGFPTANIALTDELCPANGVYAVTVEYGG- 243

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G +PT   +    +E  IFDF+++I GQR  V+F + LR E KF  I++LK
Sbjct: 244 RRLKGVANIGYSPTFEDHL-FTVEVHIFDFAEQITGQRIRVNFIERLRDEKKFSGIDELK 302

Query: 296 IYMGEDEKKARKILE 310
             +  D  +AR+IL 
Sbjct: 303 RQIAVDAAEARRILA 317


>gi|149377783|ref|ZP_01895516.1| riboflavin kinase/FAD synthase [Marinobacter algicola DG893]
 gi|149357955|gb|EDM46444.1| riboflavin kinase/FAD synthase [Marinobacter algicola DG893]
          Length = 323

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 106/324 (32%), Positives = 162/324 (50%), Gaps = 10/324 (3%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVL 53
           M +   +   +SL    +     G V  IGNFDG+HLGH  I++Q     +    P  V+
Sbjct: 1   MRLIRGLTNLKSLSQQDEAPLADGCVATIGNFDGVHLGHQTIIDQVHEKALELGVPSVVM 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            F P PR   Q       L P   + + L   G   ++  +F     +YS   FI+ VL+
Sbjct: 61  VFEPQPREFFQGREAPPRLMPFRQKFESLLASGIDVVLCLRFNERFRSYSGMGFIEDVLM 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L V+ ++ G  FRFG DRAGD  +L++ GE+ GF       +  +  + VSS+ IR  
Sbjct: 121 DGLGVRHLVVGDDFRFGCDRAGDFSLLREVGEQRGFTVENTRTVTVH-GERVSSTRIRGV 179

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L++  + +A  LLG+ + I   +++G ++GR +G PTAN+ L P +   +GVY +    +
Sbjct: 180 LSENRINDAEDLLGHPYRIRGRIVYGRQLGRQIGAPTANILL-PHMPALKGVYVVSATLE 238

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +     GVAN G  PT+       LE  +FDF+  +YGQR  V F   LR E+KF  +E 
Sbjct: 239 NGRVLDGVANIGLRPTV-DGKQPSLEVHLFDFAGTLYGQRLDVVFRHALRDEVKFDSVED 297

Query: 294 LKIYMGEDEKKARKILESSYPLSE 317
           LK  +  D   AR  +     L+ 
Sbjct: 298 LKEQIARDFDDARAWIAGHGSLAT 321


>gi|256396839|ref|YP_003118403.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Catenulispora acidiphila DSM 44928]
 gi|256363065|gb|ACU76562.1| riboflavin biosynthesis protein RibF [Catenulispora acidiphila DSM
           44928]
          Length = 320

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 16/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H       +P      VV IG FDG+H GH  ++  A+        P  VL+F+PH
Sbjct: 1   MERWHG---TAEVPQDFGPSVVTIGVFDGVHRGHREVVRTAVARGRALGVPTVVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++  S    L+    + ++L   G  A++   F+LE + +S E+F++ VLV+ L  
Sbjct: 58  PSEIVRPGSHPPLLTTQRHRAELLASEGVDAVLVLPFSLEVSRWSPEEFMRAVLVDCLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID---ELRNNKSQIVSSSNIRTALT 175
           + V+ G  FRFG   AGD   LQ+ G ++GF  V +        +     SS+ +R  + 
Sbjct: 118 RAVVVGANFRFGHRAAGDVAALQEAGGRFGFEVVPVHLMGPEGESADNRFSSTRVRALIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT-- 232
            G V  AA LLG    +E  V+ G++ GR LG+PTAN++  P   +  +GVYA    T  
Sbjct: 178 DGEVAAAADLLGRPHRVEGVVVRGDQRGRELGYPTANVETVPFAAVPTDGVYAGWLITDV 237

Query: 233 ---QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKF 288
              +    +    + G NPT        +E++  D    ++YG    V F   LR  +KF
Sbjct: 238 DKPEKSVRHPAAISIGTNPTFDGV-DRRVEAYALDRDDLDLYGTHVAVEFAARLRDTLKF 296

Query: 289 KDIEKLKIYMGEDEKKARKILESS 312
             +E L   M +D K AR+I +++
Sbjct: 297 DSVEALLDRMADDCKAAREITDAA 320


>gi|68166030|gb|AAY87949.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|313633392|gb|EFS00230.1| riboflavin biosynthesis protein RibF [Listeria seeligeri FSL
           N1-067]
          Length = 314

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|224499910|ref|ZP_03668259.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           Finland 1988]
          Length = 314

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 170/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAYFAN 311


>gi|282861446|ref|ZP_06270511.1| riboflavin biosynthesis protein RibF [Streptomyces sp. ACTE]
 gi|282564104|gb|EFB69641.1| riboflavin biosynthesis protein RibF [Streptomyces sp. ACTE]
          Length = 317

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 157/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F PH
Sbjct: 1   MQCWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPAVVVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+P   + +++  +G  A++   FT + +  +   F+ KVLV+ L  
Sbjct: 58  PSEVVRPGTHPPLLAPHRRRAELMADLGVDAVLILPFTTDFSKLAPADFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           + VI G  FRFG   AGD  +L + G  Y +    ID   +      +  SS+  R  + 
Sbjct: 118 QLVIEGPNFRFGYRAAGDVTLLAELGATYDYQVEVIDLFVSGEAGGGEPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
            G V  AA +LG    +E  V+ G + GR LGFPTAN++ L    +  +GVYA     + 
Sbjct: 178 DGDVEGAAEILGRPHRVEGTVVRGAQRGRALGFPTANVETLPHSAIPADGVYAGWLTVEG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R  +KF  ++ 
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMLKFDSVDD 295

Query: 294 LKIYMGEDEKKARKILES 311
           L + M  D K++ +++E+
Sbjct: 296 LLVAMAADVKRSSELIEA 313


>gi|68166036|gb|AAY87952.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F    +D+ +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYANGR-FDVTIVDK-QTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T Y G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-YLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|326402806|ref|YP_004282887.1| flavokinase/FAD synthetase [Acidiphilium multivorum AIU301]
 gi|325049667|dbj|BAJ80005.1| flavokinase/FAD synthetase [Acidiphilium multivorum AIU301]
          Length = 309

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 110/311 (35%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           + VFH+      +P   +G  VA+GNFDG+H GH  +L  A     ++P   L+F PHPR
Sbjct: 2   IRVFHDW---SGIPPEARGASVALGNFDGMHRGHVEVLRAAHAARPDAPRAALTFAPHPR 58

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +   P F L   + +   LE  G   L    F    +  SAE FI++VL   +    
Sbjct: 59  EFFRPDDPPFRLMLEAERAAALEAEGIEILYELTFDRAFSLLSAEAFIEEVLDRGIGAAH 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FG  R GD  +L+   E  G     +  L ++    +SSS IR  L  G+  
Sbjct: 119 LACGADFAFGHRRGGDVAMLRAAAEARGIGLSIVPHL-DDAEGPISSSRIRRLLQDGYPE 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG    I   V HG+  GRT+GFPTAN+ L   +    GVYA+  R  D     G
Sbjct: 178 RAAALLGRPHAIRGVVAHGDARGRTIGFPTANVALGRHLEPARGVYAVTVRLADGRMVKG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN GR PT+       LE+ +FDFS ++YGQ  TVS   ++R E +F   ++L+  +  
Sbjct: 238 VANIGRRPTVAEGAISRLEAHLFDFSGDLYGQEITVSLHRFIRDERRFASFDELRAQIAA 297

Query: 301 DEKKARKILES 311
           D  +AR++L +
Sbjct: 298 DADEARRLLST 308


>gi|90022212|ref|YP_528039.1| riboflavin kinase / FMN adenylyltransferase [Saccharophagus
           degradans 2-40]
 gi|89951812|gb|ABD81827.1| riboflavin kinase / FMN adenylyltransferase [Saccharophagus
           degradans 2-40]
          Length = 325

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 99/315 (31%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F   +         K  VV IG+FDG+HLGH  +L+Q +  A     P  V+ F P P  
Sbjct: 11  FKQAQFLPPFDATHKACVVTIGSFDGVHLGHQQLLQQVVAQAAHLQLPSVVIVFEPQPHE 70

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                +    L     + + L   G   ++  +F  +  N +A  F+++VLV+ L VK +
Sbjct: 71  FFSKENAPARLMRLREKVQALFAAGVDKVLCLRFNQQLRNLTANDFVEQVLVKGLGVKYL 130

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL----RNNKSQIVSSSNIRTALTKG 177
           + G  F+FG DR+GD   LQ++GEK+GF  V          ++ +  +SS+ IR  L   
Sbjct: 131 VVGDDFKFGCDRSGDFAALQQQGEKHGFSVVDTQTQLATTEHDGTDRISSTRIRALLETD 190

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               AA LLG  F++   V++G+++GRTLGFPTAN+ L        GVY +     +   
Sbjct: 191 KFDQAAALLGAPFSVAGRVVYGKQLGRTLGFPTANIGLGRYRSPVNGVYGV-VLIANDQR 249

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+ VAN G  PT+      +LE      +  +YG+   V F   +R E+KF  ++ LK  
Sbjct: 250 YNAVANVGVRPTLGGRNKPILEVHALTPTGNLYGEFVRVEFKFKIRQEMKFTSLDALKNQ 309

Query: 298 MGEDEKKARKILESS 312
           + +D   A++  +S+
Sbjct: 310 IADDVSTAKRYFQSN 324


>gi|70732627|ref|YP_262390.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens Pf-5]
 gi|68346926|gb|AAY94532.1| riboflavin biosynthesis protein RibF [Pseudomonas fluorescens Pf-5]
          Length = 314

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 99/301 (32%), Positives = 147/301 (48%), Gaps = 7/301 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPQHRGCVATIGNFDGVHRGHQAILGRLRERALELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA +F++++LV+ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLQLLADAGVDRVLCLAFNQRLSKLSASEFVERILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  +GF       +       VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGCDRVGDFDFLQQAGATHGFTVEAAQTV-ELDGLRVSSTQVRNALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 177 FDLAERLLGRPYRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSVE-LDGRTW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHHKLREEQRFASLEALKTAI 295

Query: 299 G 299
            
Sbjct: 296 N 296


>gi|87123002|ref|ZP_01078861.1| hypothetical protein MED121_24069 [Marinomonas sp. MED121]
 gi|86161719|gb|EAQ63025.1| hypothetical protein MED121_24069 [Marinomonas sp. MED121]
          Length = 309

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++    +  V+ IGNFDG+HLGH  IL++  ++A     P  ++ F P 
Sbjct: 1   MELIRGI---HNIRQQHRQCVLTIGNFDGVHLGHQAILKRVKELAQKYQVPSCIMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           +S    + + L++ G   ++   F  +     AE F Q +L   L V
Sbjct: 58  PREYFAGMKAPGRISRLRDKLRFLQEQGIDYVLCMPFNKKIQELDAEAFCQTILQNGLAV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG DR GD   L + G+++ F       + + + + +SSS +R +L +G 
Sbjct: 118 QHLVVGDDFRFGCDRQGDFSYLNEFGQRHQFAVENTPSVLSAEGKRISSSLVRESLAQGQ 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ +  LLG+   +   V+HG+K+GRTLGFPTAN+ L        GVYA++   Q    Y
Sbjct: 178 MVKSEALLGHPVILSGRVVHGQKLGRTLGFPTANVHLKIARPAMSGVYAVQLVKQGVA-Y 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+    P+ LE  +F++   +Y     V F  Y+R E K   +++L   +
Sbjct: 237 DGVANIGCRPTVNGVTPI-LEVHLFEYQGSLYDDYVLVHFCHYIREERKMSGLDELVKQI 295

Query: 299 GEDEKKARKILESS 312
             D++ A+    + 
Sbjct: 296 QCDKEAAQHFFANQ 309


>gi|312194989|ref|YP_004015050.1| riboflavin biosynthesis protein RibF [Frankia sp. EuI1c]
 gi|311226325|gb|ADP79180.1| riboflavin biosynthesis protein RibF [Frankia sp. EuI1c]
          Length = 316

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 14/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  ++   + P   +GGVV IG FDG+H+GH  I+ +A++ A     P+ VL+F+PH
Sbjct: 1   MRWWRGLD---NTPVDWRGGVVTIGFFDGVHVGHRKIIGRAVERATALGLPLLVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++L  +G  AL    FTLE +   A++F+ K+LVE L  
Sbjct: 58  PGEVLRPGSHPALLTTLQFKTELLAAIGVDALCVQPFTLEFSEVPADEFVAKILVETLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK------SQIVSSSNIRT 172
           + V+ G  F +G    G    L + G ++GF    +  LR++       + +VSS++IR 
Sbjct: 118 RVVVVGQNFSYGHRALGRIDTLVRSGAQHGFEVDAMPLLRDDHQAGPDSTPVVSSTHIRA 177

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFR 231
            + +G V  AA  LG    +E  V+HG+  GRT+GFPTAN+Q++P   +  +GVYA    
Sbjct: 178 QVAEGDVAGAAQGLGRLHRVEGVVVHGDARGRTIGFPTANLQVTPWAAIPADGVYAGYAC 237

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                      + G NPT        +E+F+ DF  ++YG+     F   LRP +KF  +
Sbjct: 238 WSG-RRQPAAISIGTNPTFA-GRERRVEAFLLDFDGDLYGEYMAFEFVALLRPTLKFNSV 295

Query: 292 EKLKIYMGEDE 302
           E+L   M  D 
Sbjct: 296 EELVSQMTLDV 306


>gi|67920640|ref|ZP_00514160.1| Riboflavin kinase / FAD synthetase [Crocosphaera watsonii WH 8501]
 gi|67858124|gb|EAM53363.1| Riboflavin kinase / FAD synthetase [Crocosphaera watsonii WH 8501]
          Length = 309

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 6/310 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + +  S  N      +A+GNFDGIHLGH  +++  I++      T+++F PHP+      
Sbjct: 1   MWVTSSTSNVKTPTAIALGNFDGIHLGHRQVIKPIIELEAEYIPTLVTFTPHPQEFFTGK 60

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    L+P + + K LE +    L+R  F    A+   + F++ +LV+ L VK +  G  
Sbjct: 61  TR-QLLTPLTEKVKRLESLKIRQLVRLPFDSSLASLGPQAFVEDILVKQLNVKYISVGQD 119

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           FRFGK R G+  +LQ+     G           +       +SSS IR  L  G+V  A 
Sbjct: 120 FRFGKGREGNAQMLQELANNLGIFVYITKLKTLVSGESGLRISSSRIRQCLAVGNVRQAK 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            +L Y +++E  V+ G+++GRT+GFPTAN+Q+  D +L + GVY +R     +    GV 
Sbjct: 180 EMLSYPYSLEGMVVRGQQVGRTIGFPTANLQIPADKLLPRRGVYCVRVILATEEVIKGVI 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT+    P  +E  + D+S  +Y     V    +LR E KF  ++ LK  + +D 
Sbjct: 240 NIGSRPTVNGQVP-TVEVHLLDWSGNLYATFLRVQLEKFLRSEQKFPSLDALKNQITQDC 298

Query: 303 KKARKILESS 312
             AR+ L   
Sbjct: 299 MIARQTLSQD 308


>gi|152976175|ref|YP_001375692.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152024927|gb|ABS22697.1| riboflavin biosynthesis protein RibF [Bacillus cytotoxicus NVH
           391-98]
          Length = 323

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 166/320 (51%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + H    +      L   V+A+G FDGIHLGH  +++ A KIA+       V++F+PH
Sbjct: 1   MKLIHLTHRHDLNKLELPPTVMALGYFDGIHLGHQRVIQTAKKIADEKGWKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++PPS++EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 61  PSVVLGKKEAHVAYITPPSLKEKVIADLGIDLLYVVKFDEAFAGLLPQQFVDEYVI-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGTMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ L+   +L   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRLYTVEGKVVHGDKRGRQIGFPTANVALNGDYLLPPVGVYAVRLKVHD-K 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   N   L +E  +F F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WHDGVCNIGYKPTFKENERQLSIEVHVFQFNEDIYDQTVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + ED+  A++  ++   +
Sbjct: 297 AQIAEDKNTAQEYFKTKKNV 316


>gi|257059957|ref|YP_003137845.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8802]
 gi|256590123|gb|ACV01010.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8802]
          Length = 322

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 178/323 (55%), Gaps = 19/323 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTII 63
           + +  S  N L    +A+GNFDGIHLGH  +L+  +++ +++P    TV++F PHP+   
Sbjct: 1   MWVTSSTSNLLTPTAIALGNFDGIHLGHKQVLQPILRLTSDNPALYPTVVTFTPHPQEFF 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +    L+P S + + LE +G   L+R  F  E A  S + F+  +L++ L+VK +  
Sbjct: 61  TGETR-QLLTPVSEKIQRLEPLGIQQLVRLPFDRELAALSPQAFVSDILIKQLQVKQISV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-------------NKSQIVSSSNI 170
           G  FRFG  R+G    L+K    YG        + +               S  +SSS I
Sbjct: 120 GEDFRFGHKRSGTAEDLRKIAANYGVSVHVTALVEDKRGRGGEGERGGTLSSLRISSSLI 179

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIR 229
           R  L  G++  A  +LGY +++   VI G+++GRT+GFPTAN+++SPD +L + GVY ++
Sbjct: 180 RQCLADGNIKQANQMLGYCYSLIGKVIQGQQLGRTIGFPTANLEISPDKLLPRFGVYCVQ 239

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            + +      GV N G  PT+    P  +E  +FD+S+++Y Q  TV   ++LRPE KF 
Sbjct: 240 IKRETGEIRQGVMNIGYRPTVEGQTP-TVEVHLFDWSEDLYQQTLTVELVEFLRPEQKFS 298

Query: 290 DIEKLKIYMGEDEKKARKILESS 312
            ++ LK  + +D + A++IL+ S
Sbjct: 299 SLDALKDQISQDCQLAKEILDKS 321


>gi|94311816|ref|YP_585026.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Cupriavidus
           metallidurans CH34]
 gi|93355668|gb|ABF09757.1| bifunctional riboflavin kinase and FAD synthetase [Cupriavidus
           metallidurans CH34]
          Length = 342

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 5/292 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +A   A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQSLLARARAAADARGLPLCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                    ++    +   L + G   ++   F    A  S + F++ VL   L  + V+
Sbjct: 76  FAPEHAPTRIALLRDKLDALRRNGVDRVVVEHFNAHFAAQSPQAFVENVLWHGLHARWVL 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  FRFG  RAGD   LQ+ G ++GF    +  + +     +SSS +R AL  G + +A
Sbjct: 136 VGDDFRFGAKRAGDFSYLQEAGRQFGFDVEQMGSV-SEGGIRISSSAVRQALAGGDLEHA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + I   VIHG K+GR LGFPT N+++S       G++ ++          GVA
Sbjct: 195 RRLLGHGYAISGHVIHGRKLGRDLGFPTLNLRISHKRPAVNGIFVVQVHGIADHPVPGVA 254

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + G  PT+   G +LLE  +FDF++ +YG+   V F   LR E ++  +E L
Sbjct: 255 SIGVRPTVEDAGRVLLEVHLFDFNENLYGKLIRVEFMKKLRDEKRYDSLEAL 306


>gi|108799065|ref|YP_639262.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. MCS]
 gi|119868180|ref|YP_938132.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. KMS]
 gi|126434668|ref|YP_001070359.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium sp. JLS]
 gi|108769484|gb|ABG08206.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium sp. MCS]
 gi|119694269|gb|ABL91342.1| riboflavin kinase / FMN adenylyltransferase [Mycobacterium sp. KMS]
 gi|126234468|gb|ABN97868.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium sp. JLS]
          Length = 333

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 17/326 (5%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           V         +P      VV IG FDG+H GH  +++ A+K   +   P  +++F+PHP 
Sbjct: 8   VVQRWRGQDDIPTDWGRCVVTIGVFDGVHRGHAELIDNAVKSGRSRGVPTVLMTFDPHPM 67

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   S    L+  + + +++E++G    +   FT +    + E++I ++LVE L V  
Sbjct: 68  EVVFPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTADFMKLTPERYIHELLVERLHVVE 127

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALTKG 177
           V+ G  F FGK  AG+  +L+K GE++GF       + E   +++   SS+ IR+ +  G
Sbjct: 128 VVVGENFTFGKKAAGNVELLRKAGERFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAG 187

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ- 235
            V+ AA  LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F      
Sbjct: 188 DVVAAAEALGRPHRVEGVVVRGDGRGRGLGFPTANVAPPMYSAIPADGVYAAWFTVLGHG 247

Query: 236 ---------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT        +E+F+ D + ++YGQ   V F   +R + 
Sbjct: 248 PVMGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVAVDFVARIRGQE 306

Query: 287 KFKDIEKLKIYMGEDEKKARKILESS 312
           KF  ++ L   MG D ++AR IL +S
Sbjct: 307 KFDSVDDLIATMGTDTERARTILRNS 332


>gi|39937439|ref|NP_949715.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           CGA009]
 gi|192293222|ref|YP_001993827.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           TIE-1]
 gi|39651298|emb|CAE29820.1| putative riboflavin kinase ribF [Rhodopseudomonas palustris CGA009]
 gi|192286971|gb|ACF03352.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           TIE-1]
          Length = 322

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 109/303 (35%), Positives = 155/303 (51%), Gaps = 5/303 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  F  I  +       KG VVA+GNFDG+H GH  ++   +       +P   ++F PH
Sbjct: 1   MTGFAVIRDDTPTAAIPKGAVVAMGNFDGVHRGHRAVIGACLDMARTKKAPALAVTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR       P F L+  + + ++L   G    +   F    A+ +A  FIQ  L+  L V
Sbjct: 61  PRKFFSPDVPQFRLTDETAKLRLLAGTGLDGAVILSFDARRASTTAHDFIQHELIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK R G   +L       G     +    +     VSSS IR  L +GH
Sbjct: 121 QGIAIGYDFHFGKGRGGSPSMLVAEAPSLGIEVD-VQPHVDFGDHPVSSSAIRKCLEEGH 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + +  +VIHG+K GR LG+PTAN++L P   LK G+YA+R   +    Y
Sbjct: 180 IAAATEMLGGPWFVTGEVIHGDKRGRDLGYPTANIRLDPQCSLKHGIYAVR-VGRGGRHY 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VANFGR PT   NG  LLE F+FDF++ +YG+   V+F  ++R E KF+ IE L   M
Sbjct: 239 DAVANFGRRPTF-DNGAPLLEVFVFDFNEPLYGETLDVAFIAFIRDEEKFESIEALIRQM 297

Query: 299 GED 301
            +D
Sbjct: 298 DDD 300


>gi|172061471|ref|YP_001809123.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia ambifaria MC40-6]
 gi|171993988|gb|ACB64907.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           MC40-6]
          Length = 330

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 155/333 (46%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFVERARAPGSRATGFSTSATDRI 329


>gi|282898908|ref|ZP_06306892.1| hypothetical protein CRC_00198 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196219|gb|EFA71132.1| hypothetical protein CRC_00198 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 336

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 24/329 (7%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--------ITVLSFNP 57
           +I +  S    L    VA+G FDG+HLGH  ++E                   TV++F+P
Sbjct: 10  SIWVAASTDQILTPTAVALGKFDGVHLGHQRVIEPVRNSHTQDNIDNIKSIHSTVVTFDP 69

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP     S  P   L+P   + + L+ +G   L+   F  E +  S   F++K+LV+ L+
Sbjct: 70  HPEEFF-SGQPRSLLTPLVEKIECLQGLGIDQLVLLPFDRELSALSPRDFVEKILVQQLQ 128

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------------DELRNNKSQIV 165
            + +  G  F FG+ R G    LQ     Y      +            D+  + +   +
Sbjct: 129 CRKISVGEDFCFGQKRLGTARDLQILAGLYNIPVNIVPIQMDMINLPANDDTIDGQENRI 188

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEG 224
           S+S IR +L+ G V  A  LLG  +T+   V+ G+K+GRT+GFPTAN+QL  D  L ++G
Sbjct: 189 STSLIRESLSLGDVPRANRLLGRPYTLSGIVVTGKKLGRTIGFPTANLQLPQDKFLPRQG 248

Query: 225 VYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLR 283
           VYA+R           GV N G  PT+     L +E  +FD+  ++YG++  +   ++LR
Sbjct: 249 VYAVRALIDTSPQVILGVMNIGNRPTVN-GYSLSVEVHLFDWEGDLYGRQLVLELVEFLR 307

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESS 312
           PE KF ++E LK  +  D   A+ +  +S
Sbjct: 308 PEQKFPNLEALKQQIELDCVTAKHVFAAS 336


>gi|332519197|ref|ZP_08395664.1| riboflavin biosynthesis protein RibF [Lacinutrix algicola 5H-3-7-4]
 gi|332045045|gb|EGI81238.1| riboflavin biosynthesis protein RibF [Lacinutrix algicola 5H-3-7-4]
          Length = 305

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 170/304 (55%), Gaps = 9/304 (2%)

Query: 14  PNHLKG--GVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPI 69
           PN L+    ++ IG FDG+H+GH  I+++ I +    +   T+L+F PHPR ++Q  + I
Sbjct: 3   PNALENEQTIITIGTFDGVHIGHQKIIKRLIAVGSKKHLKPTILTFFPHPRMVLQKDANI 62

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++    +  +LE +G   +I  KFT E +  +AE F++K+LV+ L  K +I G    F
Sbjct: 63  KLINTMDEKASLLESLGIKNMIVEKFTQEFSRLTAEDFVEKLLVKKLNAKYIIIGYDHHF 122

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++R+ +   L   G+ Y F    I   ++     VSS+ IR AL +G +  A   LGY 
Sbjct: 123 GRNRSANIDNLIDFGKTYNFEVEEITA-QDINDVAVSSTKIRNALNEGDIKTANTYLGYN 181

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           F +   V+ G+ IG+T+ +PTAN++++    ++ K+GVY I+   + +T + G+ N G N
Sbjct: 182 FMLTGTVVKGKGIGKTINYPTANLEITETYKLIPKQGVYVIKSIIEGKTVF-GMMNIGTN 240

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+       +E+  F++   +Y +   +   D LR E KF+ IE LK  + +D+ KA  
Sbjct: 241 PTV-DGTSQTIETHFFNWDVSLYNKTLKIELLDRLRDEQKFESIEVLKTQLKKDQNKALL 299

Query: 308 ILES 311
           I+++
Sbjct: 300 IIKN 303


>gi|86742238|ref|YP_482638.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia sp.
           CcI3]
 gi|86569100|gb|ABD12909.1| FMN adenylyltransferase / riboflavin kinase [Frankia sp. CcI3]
          Length = 309

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +   E   + P   +GGVV IG FDG+HLGH  I+ +A+++A        VL+F+PH
Sbjct: 1   MQTWRGAE---NTPVQWRGGVVTIGFFDGVHLGHRQIIGRAVRLARERGERSLVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++L   G  AL    FTLE +  S   F+  +LVE L  
Sbjct: 58  PGEVLRPGSHPALLTTLRFKAELLAGTGVDALCVEPFTLEFSRVSPADFVHGILVERLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F +G   AG    L + G + GF    +  +R+ + Q++SS+ IR  + +G 
Sbjct: 118 SVVVVGENFTYGHRAAGTLATLSEAGAREGFEVDGVRLVRSGE-QVLSSTAIRARVAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  L     +E  V+HG+  GRT+G+PTAN+Q++P   +  +GVYA          
Sbjct: 177 VAAAAAALDRPHRVEGVVVHGDARGRTIGYPTANIQVTPWAAVPADGVYAGFACWSG-RR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
                + G NPT        +E+F+ DF +++YG+     F   LRP ++F  + +L   
Sbjct: 236 QPAAISIGTNPTF-EGRDRRVEAFLLDFDEDLYGEYMAYEFTHRLRPTLRFDSVAELVTQ 294

Query: 298 MGEDEKKARK 307
           M  D +  R 
Sbjct: 295 MAADVEATRA 304


>gi|16800434|ref|NP_470702.1| hypothetical protein lin1366 [Listeria innocua Clip11262]
 gi|16413839|emb|CAC96597.1| ribC [Listeria innocua Clip11262]
          Length = 314

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 166/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S   F+   LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMANLGVDIMYVVRFTTQFSELSPRAFVDNYLV-ALNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TELENYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTRAYFAN 311


>gi|169827172|ref|YP_001697330.1| riboflavin biosynthesis protein ribC [Lysinibacillus sphaericus
           C3-41]
 gi|168991660|gb|ACA39200.1| Riboflavin biosynthesis protein ribC [Lysinibacillus sphaericus
           C3-41]
          Length = 316

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 1   MHVFHNIEINQSLP--NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M V H ++    L     ++   +A+G FDG+H GH  +++ A +       P  V++F+
Sbjct: 1   MEVIH-LKYPHQLQQRESMQPYSLALGFFDGVHRGHQAVIKAAKEEGEKRQIPSAVMTFD 59

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP  ++   +  +F ++    + ++ E+ G   +    FT + A  S   FI    +  
Sbjct: 60  PHPSLVLGGRNEKVFYITLLQQKLQLFEEQGVDTVFVVHFTSDFAKLSPAAFIDT-FIRG 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L ++ V  G  + FG    G    ++      G + V I E + +  + +SS+ IR  L 
Sbjct: 119 LNIQHVTAGFDYSFGAFGKGTMDDMRALS--NGDYGVTIVEKKTDDVEKISSTRIRQLLQ 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
           +G +  A  LLG  F I   V+HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+
Sbjct: 177 EGDMEAARTLLGRPFEINGMVVHGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN 236

Query: 235 QTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              Y GV N G  PT     +  L +E  I +F + IYG+   V+++  +R E KF  I+
Sbjct: 237 -AWYDGVCNVGYKPTFKDPNDKQLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGID 295

Query: 293 KLKIYMGEDEKKARKIL 309
            LK  + +D+++A +  
Sbjct: 296 ALKTQIEKDKQEAIQYF 312


>gi|171319740|ref|ZP_02908828.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria MEX-5]
 gi|171095012|gb|EDT40035.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria MEX-5]
          Length = 330

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 155/333 (46%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLQKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFVERARAPGSRATGFSTSATDRI 329


>gi|126652564|ref|ZP_01724729.1| hypothetical protein BB14905_03230 [Bacillus sp. B14905]
 gi|126590692|gb|EAZ84808.1| hypothetical protein BB14905_03230 [Bacillus sp. B14905]
          Length = 316

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 158/317 (49%), Gaps = 13/317 (4%)

Query: 1   MHVFHNIEINQSLP--NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M V H ++    L     ++   +A+G FDG+H GH  +++ A +       P  V++F+
Sbjct: 1   MEVIH-LKYPHQLQQRESMQPYSLALGFFDGVHRGHQAVIKAAKEEGEKRQIPSAVMTFD 59

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP  ++   +  +F ++    + ++ E+ G   +    FT + A  S   FI    +  
Sbjct: 60  PHPSLVLGGRNEKVFYITLLQQKLQLFEEQGVDTVFVVHFTSDFAKLSPAAFIDT-FIRG 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L ++ V  G  + FG    G    ++      G + V I E R +  + +SS+ IR  L 
Sbjct: 119 LNIQHVTAGFDYSFGAFGKGTMEDMRALS--NGDYGVTIVEKRTDDVEKISSTRIRQLLQ 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
           +G +  A  LLG  F I   V+HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+
Sbjct: 177 EGDMEAARTLLGRPFEINGMVVHGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN 236

Query: 235 QTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              Y GV N G  PT     +  L +E  I +F + IYG+   V+++  +R E KF  I+
Sbjct: 237 -AWYDGVCNVGYKPTFKDPNDKQLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGID 295

Query: 293 KLKIYMGEDEKKARKIL 309
            LK  + +D+++A +  
Sbjct: 296 ALKTQIEKDKQEAIQYF 312


>gi|319649516|ref|ZP_08003672.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398678|gb|EFV79360.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 316

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 10/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V H    ++     L    +A+G FDG+HLGH  ++ +A  I         V++F+PH
Sbjct: 1   MEVIHINHPHRMDRTVLPEMAIALGYFDGVHLGHQKVIREAKSIAEQKGLKSAVMTFDPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++  S   +  ++P   +  I+  +G   L    FT E AN   ++F+ + L+  L 
Sbjct: 61  PSVVLGKSVQHVEYITPLEDKIAIMADLGIDYLFIINFTWEFANLLPQEFVDQYLI-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K V+ G  + +G+   G    L        F    + +L   + + +SS+ IR  + +G
Sbjct: 120 AKHVVAGFDYSYGRMGRGTMETLLFHSRDQ-FDYSVVAKL-AKEDEKISSTLIRKYIREG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
                  LLG  +     VIHG+K GRT+GFPTAN+ +S D I+   GVYA+RF   D +
Sbjct: 178 KTAELPDLLGRYYKTSGTVIHGDKRGRTIGFPTANVDVSDDCIIPPPGVYAVRFLV-DGS 236

Query: 237 SYSGVANFGRNPTMVPNG--PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT          +E  IFDFS +IYG++ TV +  +LR E KF  +++L
Sbjct: 237 WYEGVCNVGYKPTFNKEKGDRPSVEVHIFDFSSDIYGRKVTVEWHKHLRNERKFAGVQEL 296

Query: 295 KIYMGEDEKKARKILESSY 313
              + +D+++  +  E + 
Sbjct: 297 IAQIAKDKQQTEQYFEKNR 315


>gi|84498580|ref|ZP_00997343.1| riboflavin kinase/ FMN adenyltransferase [Janibacter sp. HTCC2649]
 gi|84381113|gb|EAP96998.1| riboflavin kinase/ FMN adenyltransferase [Janibacter sp. HTCC2649]
          Length = 323

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M   H        P+ L   VV +GNFDG+H GH  +L + ++I      P   ++F+PH
Sbjct: 1   MSTVHRFTDPAETPDELAPCVVTLGNFDGVHRGHKAVLSRLVEIGRERGLPSVAVTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++P S+++ +LE  G   L+   FT E A  S E+F++   V+ L+ 
Sbjct: 61  PLAVLHPDRAPEIITPSSVRDDLLEATGLDGLLVLGFTKEFAQQSPEEFVKGTFVDGLQA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G   RFG   +GD   L++ GE YGF  + ++++     +  SS+++R ALT+G 
Sbjct: 121 KVVVVGVDTRFGYKNSGDVATLRELGETYGFEVIALEDV--GDGERWSSTSVRNALTEGD 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD--- 234
           V  AA +LG    +   V+HG   GR LGFPTAN+      ++  EGVYA      D   
Sbjct: 179 VAAAARVLGRPHRVVGTVVHGHHRGRELGFPTANLSPDSAGLVPAEGVYAGWLTRLDLDA 238

Query: 235 ---QTSYSGVANFGRNPTMVPNGPLLLESFI-FDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
                +     + G NPT        +E+++      ++Y +R  V F +++RP ++F  
Sbjct: 239 GEPDRTMPAAISIGTNPTFDTKDRRTVEAYVLDRDDLDLYDERVVVEFVEHIRPTLRFDS 298

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I+ L + M +D ++ R +L
Sbjct: 299 IDDLLVAMAKDVEQCRAVL 317


>gi|68166034|gb|AAY87951.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVRYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F    +D+ +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYANGR-FDVTIVDK-QTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T Y G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGET-YLGMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|309810439|ref|ZP_07704266.1| riboflavin biosynthesis protein RibF [Dermacoccus sp. Ellin185]
 gi|308435591|gb|EFP59396.1| riboflavin biosynthesis protein RibF [Dermacoccus sp. Ellin185]
          Length = 316

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 13/315 (4%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTII 63
            +     LP      VV +GNFDG+H GH  ++++  + A         ++F PHP  ++
Sbjct: 3   RLTDPHDLPADFGPTVVTLGNFDGVHRGHAAVMQRVAQEAHARALKSVAVTFEPHPLAVL 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                   L+    +  +LE++G  A++   FT E A  +  +F++   V+ L    V+ 
Sbjct: 63  APDKAPEMLTGMKDRLFLLEQLGLDAVVVMPFTRELAAQTPREFVETTFVDALHAGCVVV 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G   RFG   +GD   L + G ++GF  + +D++        SSS +R  +  G V  AA
Sbjct: 123 GKDTRFGVKNSGDIRTLSELGGEFGFDVIALDDV--GPGVRWSSSQVRELIAGGKVDEAA 180

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT----QDQTSY 238
            +LG    +  +V+ G + GR LGFPTAN+    + ++  +GVYA         QD   Y
Sbjct: 181 EVLGRNHCVVGEVVKGFQRGRELGFPTANLARDAEGVVPADGVYAGWLVRRSLAQDDPEY 240

Query: 239 --SGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                 + G NPT        +E+++ D    ++YG+   V F  +LR  +KF  IE L 
Sbjct: 241 RLPAAISVGTNPTF-DIPERTVEAYVLDRTDLDLYGEIVAVEFVQHLRGNVKFDSIEALI 299

Query: 296 IYMGEDEKKARKILE 310
             M  D + AR +L 
Sbjct: 300 EQMTRDVEAARDLLA 314


>gi|290893560|ref|ZP_06556543.1| ribC protein [Listeria monocytogenes FSL J2-071]
 gi|290556905|gb|EFD90436.1| ribC protein [Listeria monocytogenes FSL J2-071]
          Length = 314

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAYFAD 311


>gi|302346932|ref|YP_003815230.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           ATCC 25845]
 gi|302150673|gb|ADK96934.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           ATCC 25845]
          Length = 323

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 159/318 (50%), Gaps = 7/318 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           + I I +   + L   V  IG FDG+H GH  ++ + I  A        V++F+ HPR +
Sbjct: 2   NTIYIKRDEAHELVEQVATIGFFDGVHRGHQFLISRVIDEAERSGMASAVITFDRHPRQV 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +Q+      LS    +  +L K          F    A  SA  F+Q+VL + L VK +I
Sbjct: 62  LQADYQPELLSTLDEKLLLLSKTHIDNSFVLHFDASLAALSAHDFMQEVLCKQLNVKKLI 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G   RFG +R+       + G++ G   +  D    N  + VSSS IR  L  G++  A
Sbjct: 122 IGYDNRFGHNRSETFEDYVQYGKEMGIEVIRADAFLPND-EKVSSSVIRNDLRAGNIEAA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYS- 239
             LLGY +TIES ++ G + GR +GFPTAN+ ++    +L   GVYA+  R +D   +  
Sbjct: 181 NRLLGYPYTIESRIVSGYQNGRKMGFPTANLDVNGCQQLLPASGVYAVMVRLKDSVEWKR 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+ N G  PT        +E  +F+F+  +YGQ   VSF   +R E KF  +E L   + 
Sbjct: 241 GMMNIGHRPTFN-GTTTSIEVNLFNFTGNLYGQELLVSFISKIRDEHKFDSLEALAQQLK 299

Query: 300 EDEKKARKILESSYPLSE 317
           +D+++  ++ + +Y + E
Sbjct: 300 QDKEQINRLFDETYHIQE 317


>gi|254428562|ref|ZP_05042269.1| riboflavin biosynthesis protein RibF [Alcanivorax sp. DG881]
 gi|196194731|gb|EDX89690.1| riboflavin biosynthesis protein RibF [Alcanivorax sp. DG881]
          Length = 327

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/328 (31%), Positives = 149/328 (45%), Gaps = 23/328 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L +  +G V  IGNFDG+H GH  IL+Q I          TV+ F P 
Sbjct: 1   MRLIRGI---HNLRDTHRGCVATIGNFDGVHQGHQRILDQVIAEARRRGLKSTVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+      +    L     +   L + G   ++  +F     + +AE F++ +LV+ L V
Sbjct: 58  PQEFFSPQTAPPRLMSLRDKLIALREAGVDQVLCVRFDERFRSLTAEAFVKALLVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R GD   LQ+ G+++GF             + VSS+ +R AL  G 
Sbjct: 118 EYLVVGDDFRFGCGRDGDFAYLQQAGQQFGFAVTDTAT-CEVDGERVSSTRVRAALCDGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V HG+KIGRTLG PT N+ L        GV+A+          
Sbjct: 177 FALAERLLGRPFAISGRVRHGDKIGRTLGLPTVNLALKRLQSPLHGVFAVTVTGAGLVDQ 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDF----------------SQEIYGQRCTVSFFDYL 282
            G AN G  PT+       LE ++ D+                   +YG   TV+F  Y+
Sbjct: 237 PGAANMGTRPTVN-GTENRLEVYLLDYSDSAGGSGSGDTQRTHQDSLYGAHLTVAFRHYV 295

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           RPE KF D+++LK  + +D    R   +
Sbjct: 296 RPEEKFADLDQLKTAIRQDVDAVRAFFD 323


>gi|84515120|ref|ZP_01002483.1| riboflavin biosynthesis protein RibF [Loktanella vestfoldensis
           SKA53]
 gi|84511279|gb|EAQ07733.1| riboflavin biosynthesis protein RibF [Loktanella vestfoldensis
           SKA53]
          Length = 313

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/314 (35%), Positives = 164/314 (52%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +  +   +  +    +G   AIGNFDG+H+GH  +++  +A   A  +P+ +++F PH
Sbjct: 1   MRIIRD---SVFIDPADRGAAAAIGNFDGVHIGHRAVIDIARAAADAAKAPLGIMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+     +  F L     +   L K+G   L    F    AN +   F QK++ + L +
Sbjct: 58  PRSYFARDTGPFRLMNAEARANRLAKLGIEKLYEVPFNTALANLTPRDFAQKIIRDQLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FGKDR G    LQ  G + GF       +       +SS+ IR ALT G 
Sbjct: 118 VHVVVGADFCFGKDRKGTVADLQAFGAEMGFGVTI-APIIAIAGANISSTAIRAALTDGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
             +AA +LG+   IE  VI G++ GR LG+PTANM +S     K GVYA++    +   +
Sbjct: 177 PRDAAAMLGHWHRIEGAVIRGDQRGRELGYPTANMSISGLHPPKFGVYAVKIDVLEGAFK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +YSG A+ G  P    N P   E+FIFDF  ++YG   +V+  D+LRPE+KF  ++ L 
Sbjct: 237 GTYSGAASIGVRPMFGENVP-NCETFIFDFKGDLYGTHLSVALVDFLRPELKFDSLDALI 295

Query: 296 IYMGEDEKKARKIL 309
             MG D  +AR IL
Sbjct: 296 TQMGADCAQARDIL 309


>gi|75914664|gb|ABA29749.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I +F +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILNFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|322420007|ref|YP_004199230.1| riboflavin biosynthesis protein RibF [Geobacter sp. M18]
 gi|320126394|gb|ADW13954.1| riboflavin biosynthesis protein RibF [Geobacter sp. M18]
          Length = 331

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 171/319 (53%), Gaps = 8/319 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++ +I     +   L+   V IGNFDG+HLGH  I  +  ++A  +     V++F PH
Sbjct: 1   MVIYRSI---SEIREKLRHPAVTIGNFDGVHLGHREIFRRVRELARETGGVSVVVTFVPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ +   +  ++    +E ++E  G   L+   F    A   A +F+++VLV+ + V
Sbjct: 58  PLKVVSAHREVRLITTSREKEALIEGSGIDYLLEIPFDRAFAAVPAAEFVERVLVDAIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  + FG+ R GD G+L+  G+++G+    +  + +  +   SS+ +R  ++ G 
Sbjct: 118 ERLVIGYDYAFGRGREGDVGLLRDLGKRFGYTVEELQPISDGSTVY-SSTAVRRMVSAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A+ +LG  F I   V+HG + GR LGFPTAN++   D++   GVYA++     +   
Sbjct: 177 VAGASLVLGRHFAITGKVVHGHERGRGLGFPTANIETDKDLIPSAGVYAVK-VCLGEQLL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT   N  L +E F+ DF  ++YG+  T+ F + LR E +F  + +LK  +
Sbjct: 236 DGACNIGANPTF-GNARLSIEVFLLDFDADLYGREITLFFIERLRGEKRFAGLGELKDAI 294

Query: 299 GEDEKKARKILESSYPLSE 317
             D  + R+IL+ + P+  
Sbjct: 295 AADVVRCREILKDARPVES 313


>gi|284030884|ref|YP_003380815.1| riboflavin biosynthesis protein RibF [Kribbella flavida DSM 17836]
 gi|283810177|gb|ADB32016.1| riboflavin biosynthesis protein RibF [Kribbella flavida DSM 17836]
          Length = 323

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/328 (32%), Positives = 155/328 (47%), Gaps = 20/328 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFNP 57
           M V+H ++    +       VV IGNFDG+H GH  +L  A   A      P+  L+F+P
Sbjct: 1   MRVWHGLD---EVGPDYGPSVVTIGNFDGVHRGHQEVLAHARARAEQLGGLPVVALTFDP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  +++      T+S P+ + ++L   G  A++   F  ET+N+S ++FI +VLV  L+
Sbjct: 58  HPIAVLRPDRAPATISEPAERARLLGDAGADAVLILPFDKETSNWSPQEFIDRVLVGTLQ 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K V+ G  FRFG   AG    L + G   GF    +        Q  SS+ IR  +  G
Sbjct: 118 AKAVVVGENFRFGHRAAGHVDTLVEAGAVAGFQVEGLA--LKGDGQPWSSTAIRELVAAG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ- 235
            V  AA  LG    +   V+ G+K GR LG+PTAN+   P   +  +GVYA      D  
Sbjct: 176 DVEGAATALGRPLRVTGRVVEGDKRGRELGYPTANIPAEPGAAVPLDGVYAGWLTVLDPA 235

Query: 236 -------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRP-EI 286
                    +    + G NPT        +ES++ D    E+YG R  V F   LR  +I
Sbjct: 236 PGAPAYGDPFPAAISVGSNPTF-DGVDRRVESYVLDRDDLELYGSRIAVDFVARLRGSQI 294

Query: 287 KFKDIEKLKIYMGEDEKKARKILESSYP 314
           +F  I+ L + M  D   AR++L    P
Sbjct: 295 RFDSIDDLLVQMKADVDAARRLLTGDTP 322


>gi|170697698|ref|ZP_02888786.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           IOP40-10]
 gi|170137446|gb|EDT05686.1| riboflavin biosynthesis protein RibF [Burkholderia ambifaria
           IOP40-10]
          Length = 330

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFVERARAPGSRATGFSTSATDRI 329


>gi|218246896|ref|YP_002372267.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8801]
 gi|218167374|gb|ACK66111.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 8801]
          Length = 322

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 108/323 (33%), Positives = 177/323 (54%), Gaps = 19/323 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTII 63
           + +  S  N L    +A+GNFDGIHLGH  +L+  +++ +++P    TV++F PHP+   
Sbjct: 1   MWVTSSTSNLLTPTAIALGNFDGIHLGHKQVLQPILRLTSDNPALYPTVVTFTPHPQEFF 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              +    L+P S + + LE +G   L+R  F  E A  S + F+  +L++ L+VK +  
Sbjct: 61  TGETR-QLLTPVSEKIQRLEPLGIQQLVRLPFDRELAALSPQAFVSDILIKQLQVKQISV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-------------NKSQIVSSSNI 170
           G  FRFG  R+G    L+K    YG        + +               S  +SSS I
Sbjct: 120 GEDFRFGHKRSGTAEDLRKIAANYGVSVHVTALVEDKRGRGGEGERGGTLSSLRISSSLI 179

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIR 229
           R  L  G++  A  +LGY +++   VI G+++GRT+GFPTAN+++SPD +L + GVY ++
Sbjct: 180 RQCLADGNIKQANQMLGYCYSLIGKVIQGQQLGRTIGFPTANLEISPDKLLPRFGVYCVQ 239

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            + +      GV N G  PT+    P  +E  +FD+S+++Y Q  TV   ++LRPE KF 
Sbjct: 240 IKRETGEIRQGVMNIGYRPTVEGQTP-TVEVHLFDWSEDLYQQTLTVELVEFLRPEQKFS 298

Query: 290 DIEKLKIYMGEDEKKARKILESS 312
            ++ LK  + +D + A++I + S
Sbjct: 299 SLDALKDQISQDCQLAKEIFDQS 321


>gi|190573351|ref|YP_001971196.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Stenotrophomonas maltophilia K279a]
 gi|190011273|emb|CAQ44886.1| putative riboflavin biosynthesis protein RibF [Stenotrophomonas
           maltophilia K279a]
          Length = 315

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHP 59
            +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+  A    +  ++  F P P
Sbjct: 3   RLFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+    + +IL ++G  A+   +F    A   AE F++++LV+ L  +
Sbjct: 60  REFFAQGTPPPRLTLARSKVEILRELGVDAVGLLRFDAAMAAMPAETFVRQLLVKRLSAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L +G  
Sbjct: 120 EVWIGPEFCFGNRRRGDLALLQKMGAELGFTAGEIEAV-DLHGERISSTRIRQLLQQGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          + 
Sbjct: 179 ARANDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M 
Sbjct: 238 SVSSFGTRPTVEGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR IL  
Sbjct: 297 RDAEQARAILSE 308


>gi|228992537|ref|ZP_04152464.1| FMN adenylyltransferase [Bacillus pseudomycoides DSM 12442]
 gi|228767171|gb|EEM15807.1| FMN adenylyltransferase [Bacillus pseudomycoides DSM 12442]
          Length = 335

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 165/320 (51%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           +H+ H  E N+     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 16  IHLTHPHEQNKI---ELPPTVMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPH 72

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  I+EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 73  PSVVLGKKEAHVEYITPLRIKEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLN 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 132 VKHVVAGFDYSYGRLGKGTMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 190 EMEQIPSILGRAYTVEGMVVHGDKRGRQIGFPTANVALSEEYLLPPVGVYAVRLKVHG-E 248

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   +   L +E  +F F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 249 WHDGVCNIGYKPTFKDDERNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDELV 308

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   ++  +
Sbjct: 309 AQIAKDKKTAQEYFSTTKNI 328


>gi|119476950|ref|ZP_01617231.1| hypothetical protein GP2143_10367 [marine gamma proteobacterium
           HTCC2143]
 gi|119449757|gb|EAW30994.1| hypothetical protein GP2143_10367 [marine gamma proteobacterium
           HTCC2143]
          Length = 310

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/313 (32%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +L    +G V  IG FDG+H GH  +L++ I        P TV+ F P 
Sbjct: 1   MELIRGL---HNLRPRHRGCVTTIGAFDGVHHGHRAVLQRLIDKGGEMGLPTTVVVFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           L     + K L+ +G   ++R +F          +F++KV VE L  
Sbjct: 58  PKEFFAPQQAPARLMSFREKFKALKALGIDRILRIRFNESLREMDGGEFVRKVFVEGLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFG+DR G+  +L+K G + GF     + L  +  + VSS+ IR AL    
Sbjct: 118 KHIIIGDDLRFGRDRGGNFELLRKFGLEKGFTVEATETLTMDDER-VSSTRIRKALEDID 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F+I   VI G+++GR LG PTANM+L        GV+A+     D  + 
Sbjct: 177 FDLANTLLGRPFSISGKVIVGKQLGRQLGAPTANMELHRLRSPLSGVFAV-DAIIDAETV 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G  PT+      +LE  + DF ++IYG+   V F   +R E KF  I+ LK  +
Sbjct: 236 HGIANVGTRPTVGDGLKAILEVHLLDFDRDIYGKNIEVIFRTKIRDEKKFDSIDNLKQQI 295

Query: 299 GEDEKKARKILES 311
            ED +  R+   S
Sbjct: 296 HEDFETGRRYFAS 308


>gi|21230612|ref|NP_636529.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66769392|ref|YP_244154.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|21112193|gb|AAM40453.1| riboflavin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574724|gb|AAY50134.1| riboflavin biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 362

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/312 (32%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P+   G VV IG FDG+HLGH  ++  A++ A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFPH---GSVVCIGAFDGLHLGHQALVRHAVERARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R    + +P   L+    + + L   G  ++   +F    +  SA+ F++  LV  L  +
Sbjct: 60  REFFANDTPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSAMSAQDFVRLALVGRLCAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD  +L+  GE++GF    I  +   + + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRGGDIALLRALGEQHGFAAGEIAPVH-LRGERISATRIRELLVAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++ S       G+YA          + 
Sbjct: 179 AHAGELLGRPYAIGGRVVRGKQLGRTLGYPTANLRFSR-TPALSGIYATWVHGVAAQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGIEP-LLEAHLFDFQGDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR +L +
Sbjct: 297 RDAEQARAVLAT 308


>gi|229019003|ref|ZP_04175845.1| FMN adenylyltransferase [Bacillus cereus AH1273]
 gi|229025248|ref|ZP_04181670.1| FMN adenylyltransferase [Bacillus cereus AH1272]
 gi|228736076|gb|EEL86649.1| FMN adenylyltransferase [Bacillus cereus AH1272]
 gi|228742331|gb|EEL92489.1| FMN adenylyltransferase [Bacillus cereus AH1273]
          Length = 323

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   +++ L 
Sbjct: 61  PSVVLGKKEAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYIID-LN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+++R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEYQEEKVSSTSLRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVEGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WHDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S+  +
Sbjct: 297 AQIAKDKKIAQEYFSSAKNI 316


>gi|217964524|ref|YP_002350202.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes HCC23]
 gi|217333794|gb|ACK39588.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes HCC23]
 gi|307570910|emb|CAR84089.1| riboflavin biosynthesis protein [Listeria monocytogenes L99]
          Length = 314

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAYFAD 311


>gi|170747319|ref|YP_001753579.1| riboflavin biosynthesis protein RibF [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653841|gb|ACB22896.1| riboflavin biosynthesis protein RibF [Methylobacterium
           radiotolerans JCM 2831]
          Length = 328

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 117/310 (37%), Positives = 157/310 (50%), Gaps = 5/310 (1%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRT 61
           F     +  +P  L G V AIGNFDG+HLGH  +++     A     P  +L+F PHPR 
Sbjct: 12  FTICRADAPVPPALAGAVAAIGNFDGVHLGHRTLVDSVRAAARAAGRPSAILTFEPHPRA 71

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                +P+F L+ P+ +E +   +G   LI  +F    A   A  F+   L   L +  V
Sbjct: 72  YFMPDAPMFRLTGPAAKEIVFAHLGLDGLIVRRFDGALAETGARAFVLDFLKGSLGLSGV 131

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVL 180
           + G  F FG+ R G   IL     + G     +  +        VSSS IR AL  G V 
Sbjct: 132 VVGHDFHFGRGREGTPAILADLCREAGMSCRIVAPVALGGETAPVSSSAIRAALAAGDVA 191

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLGYR+ +   V HG+K GR LGFPTAN+ L PD  L  G+YA+R R        G
Sbjct: 192 RANALLGYRWFVLGAVRHGDKRGRQLGFPTANVML-PDCGLAHGIYAVRVRLASGAFRDG 250

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA++GR PT   +G  LLE+++FDFS ++YGQ   V F  Y+R E +F   E L   M  
Sbjct: 251 VASYGRRPTF-DDGAPLLETYLFDFSGDLYGQDVAVEFVGYIRGEERFASAEALVERMHV 309

Query: 301 DEKKARKILE 310
           D   AR +L 
Sbjct: 310 DAATARAMLA 319


>gi|170733872|ref|YP_001765819.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia MC0-3]
 gi|169817114|gb|ACA91697.1| riboflavin biosynthesis protein RibF [Burkholderia cenocepacia
           MC0-3]
          Length = 330

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R +L  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVSGSDGTRISSSGVRASLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D   AR         +ERDR
Sbjct: 297 ALDVANARAYF------TERDR 312


>gi|78067312|ref|YP_370081.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia sp. 383]
 gi|77968057|gb|ABB09437.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia sp. 383]
          Length = 330

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/322 (30%), Positives = 151/322 (46%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    LQ  G +YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLQAAGAQYGFEVEQMGTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D   AR          ERDR
Sbjct: 297 ALDVANARAYF------IERDR 312


>gi|15605718|ref|NP_213095.1| riboflavin kinase [Aquifex aeolicus VF5]
 gi|2982868|gb|AAC06488.1| riboflavin kinase [Aquifex aeolicus VF5]
          Length = 314

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 16/316 (5%)

Query: 1   MHVFHNIEINQSLPNH--------LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPI 50
           M VF     +++ PN          +   + +GNFDG+HLGH  ++E   K A   N   
Sbjct: 1   MEVFLLKLDSKNCPNKRLKTLEEVPENTAITVGNFDGVHLGHRYLIENLKKKAKSENLKT 60

Query: 51  TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
            VL+F PHP  ++        L+  + + +I  ++G   L   +F  E A   A +F++K
Sbjct: 61  LVLTFCPHPLKVLAPQLLPCELTDINEKIEIFRELGVDYLCFIRFDKEFAKIRAREFLEK 120

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           ++ E L+ + ++ G  +R+G  R G+  + ++ G + GF        +  K  IVSS+ I
Sbjct: 121 IIYEKLKCRYLLVGYDWRYGYRREGEIELAKEVGSELGFEVEEAKPFKI-KGHIVSSTLI 179

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           R  L +G V      LG+ + ++  V+ G++ G  +GFPTAN+Q + ++ LKEGVYA++ 
Sbjct: 180 RRLLREGRVEEVREYLGHNYWVKRKVVKGDQRGSKIGFPTANLQNTENLCLKEGVYAVKV 239

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
                  Y GVAN+G  PT       +LE  I DF   + G+R  V F  ++R E KF  
Sbjct: 240 E----DKYLGVANYGYRPTF-GKKKRVLEVHILDFEGNLRGKRIKVEFLKFIREEKKFSS 294

Query: 291 IEKLKIYMGEDEKKAR 306
           +E+L   + +D +  +
Sbjct: 295 VEELIQQIKKDVEAVK 310


>gi|254251625|ref|ZP_04944943.1| Riboflavin kinase / FAD synthetase [Burkholderia dolosa AUO158]
 gi|124894234|gb|EAY68114.1| Riboflavin kinase / FAD synthetase [Burkholderia dolosa AUO158]
          Length = 330

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LAAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLQKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
            +D   AR          ERDR
Sbjct: 297 AQDVANARAYF------IERDR 312


>gi|68166026|gb|AAY87947.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|27382591|ref|NP_774120.1| riboflavin biosynthesis bifunctional protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355763|dbj|BAC52745.1| riboflavin biosynthesis bifunctional protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 380

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 110/301 (36%), Positives = 160/301 (53%), Gaps = 8/301 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           V  +   + ++P   +G VVA+GNFDG+HLGH  ++  A+++      P   L+F PHPR
Sbjct: 64  VIRDTTPDSAIP---RGAVVAMGNFDGVHLGHRAVIAAALEMGRAHGRPALALTFEPHPR 120

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++P F L+    + ++L   G S  +   F    A  SA+ FI   L+  L V  
Sbjct: 121 RFFSPNTPQFRLTDERAKLRLLAGTGLSGAVVMTFDKARAGTSAQDFIHHDLIGRLGVSA 180

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  F FGK R G   +L     + G     +    +   + VSSS IR AL +G + 
Sbjct: 181 IAVGYDFHFGKGRVGSPSLLVNEAPRLGIEVD-VQPHVDFDERPVSSSAIRIALAEGQLD 239

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  +LG  + I  +VIHGEK GR LG+PTAN++L  +  LK G+YA+R   +      G
Sbjct: 240 EATTMLGAPWFITGEVIHGEKRGRDLGYPTANIRLDANCGLKHGIYAVR-VGRGAERLDG 298

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VA+FGR PT   NG  LLE F+FDF  ++YGQ    +F  ++R E+KF  +E L   M +
Sbjct: 299 VASFGRRPTF-DNGAPLLEIFLFDFKGDLYGQALDCAFVGFIREELKFDSLEALIRQMDD 357

Query: 301 D 301
           D
Sbjct: 358 D 358


>gi|254827590|ref|ZP_05232277.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N3-165]
 gi|258599967|gb|EEW13292.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N3-165]
          Length = 314

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 170/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L +  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAQYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAN 311


>gi|68166028|gb|AAY87948.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTELGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|313619125|gb|EFR90917.1| riboflavin biosynthesis protein RibF [Listeria innocua FSL S4-378]
          Length = 314

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TELENYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTRAYFAN 311


>gi|228902312|ref|ZP_04066469.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 4222]
 gi|228909633|ref|ZP_04073456.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 200]
 gi|228940897|ref|ZP_04103456.1| FMN adenylyltransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228966754|ref|ZP_04127798.1| FMN adenylyltransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228973826|ref|ZP_04134402.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980415|ref|ZP_04140725.1| FMN adenylyltransferase [Bacillus thuringiensis Bt407]
 gi|228779235|gb|EEM27492.1| FMN adenylyltransferase [Bacillus thuringiensis Bt407]
 gi|228785851|gb|EEM33854.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792853|gb|EEM40411.1| FMN adenylyltransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228818733|gb|EEM64799.1| FMN adenylyltransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228849922|gb|EEM94753.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 200]
 gi|228857281|gb|EEN01784.1| FMN adenylyltransferase [Bacillus thuringiensis IBL 4222]
          Length = 335

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFASEKNI 328


>gi|84623168|ref|YP_450540.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|84367108|dbj|BAE68266.1| riboflavin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 338

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 8/321 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            +F ++E     P    G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +  SAE F+   LV  L  +
Sbjct: 60  REFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMSAEDFVHLALVGRLCAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD G+L   GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRGGDIGLLHTLGEQHGFVAGEIAPVHLH-GERISATRIRELLVAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +T + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAETPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILESSYPLSERDR 320
            D ++AR +L +S      D 
Sbjct: 297 RDAEQARAVLAASPSQEPEDN 317


>gi|323489594|ref|ZP_08094821.1| riboflavin biosynthesis protein ribC [Planococcus donghaensis
           MPA1U2]
 gi|323396725|gb|EGA89544.1| riboflavin biosynthesis protein ribC [Planococcus donghaensis
           MPA1U2]
          Length = 316

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 159/320 (49%), Gaps = 13/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNP 57
           M + H    NQ  P+   G   +A+G FDG+H GH  ++ +AIK          V++F+P
Sbjct: 1   MEIIHLTYPNQVKPDSETGPLSLALGFFDGVHKGHQRVIGEAIKQAEQKGIKSAVMTFDP 60

Query: 58  HPRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HP  ++      +F ++P   +  ILE M        +FT E A  + E+FI    +  L
Sbjct: 61  HPSLVLGGRKEEVFYITPMQQKMDILEDMNVDYCFIIRFTSEFAKLTPEEFI-NFFITGL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             K V  G  F FG    GD  ++++  E +YG   V I E      + +SS+ IR  L 
Sbjct: 120 NAKHVTAGFDFSFGCKGKGDMELMKQMSEDRYG---VTIAEKLEEGDEKISSTRIRELLK 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD 234
           +G       LLG  F +   V++G+K GRT+GFPTAN++     ++   GVYA++ R Q 
Sbjct: 177 QGETGKVCQLLGRPFRVLGTVVNGDKRGRTIGFPTANIEPELGAVVPSRGVYAVKIRVQG 236

Query: 235 QTSYSGVANFGRNPTMV--PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              Y+GV N G  PT         ++E  + +F + IYG+   V + D +R E KF  IE
Sbjct: 237 NV-YNGVCNIGYKPTFNNPDVKKHVIEVHVLEFDKSIYGEMVEVEWHDRIRDEQKFSGIE 295

Query: 293 KLKIYMGEDEKKARKILESS 312
           +LK  +  D+K A +I   +
Sbjct: 296 ELKAQIQRDKKTAEQIFSRT 315


>gi|254829914|ref|ZP_05234569.1| hypothetical protein Lmon1_01095 [Listeria monocytogenes 10403S]
 gi|284801714|ref|YP_003413579.1| hypothetical protein LM5578_1468 [Listeria monocytogenes 08-5578]
 gi|284994856|ref|YP_003416624.1| hypothetical protein LM5923_1421 [Listeria monocytogenes 08-5923]
 gi|284057276|gb|ADB68217.1| hypothetical protein LM5578_1468 [Listeria monocytogenes 08-5578]
 gi|284060323|gb|ADB71262.1| hypothetical protein LM5923_1421 [Listeria monocytogenes 08-5923]
          Length = 314

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +I         VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYLV-ALHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAN 311


>gi|148657855|ref|YP_001278060.1| riboflavin biosynthesis protein RibF [Roseiflexus sp. RS-1]
 gi|148569965|gb|ABQ92110.1| riboflavin kinase / FMN adenylyltransferase [Roseiflexus sp. RS-1]
          Length = 310

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M++ + +      P + +  V+ IG FDG+H GH  ++   ++ A        VL+F+PH
Sbjct: 1   MNIVYGL----PQPINERPTVLTIGAFDGVHRGHAHLISTTVQRARALGRQAAVLTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++      TL+    + +++  +G   ++   FT E    +A +F+ ++    L +
Sbjct: 57  PDVVVRPGKERPTLTTVVERAELIAALGVDLMVIIPFTRELMALTAHEFMARLC-GALAI 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F  G+ R G+   L   G+ +G+    ++    +  + VSS+ IR AL  G 
Sbjct: 116 RELCIGWDFALGRGREGNAERLATIGQTFGYTVHRVEPFLLD-GETVSSTRIRAALGDGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +  A  LLGY +++   ++ G++ GRT+GFPTAN+ + P  +L   GVY  R      T 
Sbjct: 175 IAAANRLLGYPYSLRGPIVEGDRRGRTIGFPTANIHVDPRRMLPAHGVYVCRALLGGVT- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  V N G  PT        +E+++ DFS E+YG+   + F   LR E KF  I  L   
Sbjct: 234 YGAVTNVGVRPTF-DGSRRTVEAYLLDFSDEVYGEELRLMFLHRLRGEQKFDGIAALVAQ 292

Query: 298 MGEDEKKARKILE 310
           +  D   AR  L+
Sbjct: 293 ISRDVAAARDWLQ 305


>gi|68166020|gb|AAY87944.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|68166022|gb|AAY87945.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|68166024|gb|AAY87946.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
 gi|75914666|gb|ABA29750.1| riboflavin kinase and FAD synthase-like protein [Listeria
           seeligeri]
          Length = 314

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 106/295 (35%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA KIA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKKIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + +MG   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAQKMTEMGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLESYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|254508943|ref|ZP_05121050.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus 16]
 gi|219548118|gb|EED25136.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus 16]
          Length = 288

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 95/284 (33%), Positives = 144/284 (50%), Gaps = 4/284 (1%)

Query: 30  IHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +HLGH  +L Q  + A     P TV++F+P P  +    +    L+    +   L K+  
Sbjct: 1   MHLGHQAVLRQVSEKARELGLPATVMTFDPQPLELFAKENAPARLTRLRDKFVQLSKLDI 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
           + L+   F  + AN +A++FI  +LV  L VK ++ G  F FG+ R G+  +L++ G+K+
Sbjct: 61  ARLLCVNFNHQFANQTADEFISDLLVTRLGVKFLVVGDDFCFGRGREGNFAMLKEAGKKF 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           GF  V        K + VSS+ IR AL +  +  AA +LG  ++I   V HG K+GRT+G
Sbjct: 121 GFEVVSTHSFCLQKLR-VSSTAIREALAQDKLDAAARMLGRDYSISGRVSHGRKLGRTIG 179

Query: 208 FPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ 267
           FPTAN+ L   +    GVY ++          GVAN G  PT+       LE  +FDF  
Sbjct: 180 FPTANIPLKRSVSPVSGVYVVQALGLGDRPVGGVANIGNRPTVNGV-RQQLEVHLFDFHA 238

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +YG++  +     LR E KF   + LK  +  D + AR  L  
Sbjct: 239 NLYGKQLEIVLLHKLRDEHKFDSFDALKQQIELDAEAARVWLRQ 282


>gi|237747480|ref|ZP_04577960.1| riboflavin biosynthesis protein RibF [Oxalobacter formigenes
           HOxBLS]
 gi|229378831|gb|EEO28922.1| riboflavin biosynthesis protein RibF [Oxalobacter formigenes
           HOxBLS]
          Length = 318

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 158/319 (49%), Gaps = 12/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF     +           + IGNFDG+H GH ++L +  + A+  + P  VL+FNPH
Sbjct: 1   MKVFRGFLYD----PPHGPCALTIGNFDGVHKGHMVLLAKLREAADRLHLPAAVLTFNPH 56

Query: 59  PRTIIQSS-----SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR           S   T++P   + + L +     +   +F    ++ S E+FI+++LV
Sbjct: 57  PRQYFALKTGTLSSAPATITPLREKVQALAQCCVDQVTIARFNNTVSSLSPEEFIEEILV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L V+ +I G KFRFGK R G    L++ G+++GFH   +  + +   + +SSS IR A
Sbjct: 117 KALNVRWLIIGEKFRFGKGRTGTTDELKEAGKRFGFHVEVLPAVMDENGR-ISSSCIRQA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +      + LLG  + I   ++HG+KIGR LGFPTAN+ +     +  GV+  R    
Sbjct: 176 LEQSDFEKVSGLLGKPYAISGHIVHGDKIGRDLGFPTANLPIRHYNPILSGVFITRVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           ++     V+  G  PT+  +  ++LE+ I DF +  YG    V F   LR   KF D+  
Sbjct: 236 EEKPLPSVSMIGTRPTIESDRHIMLETHILDFGRTCYGSLVQVEFLKKLRDNQKFPDLNA 295

Query: 294 LKIYMGEDEKKARKILESS 312
           LK  +  D   AR      
Sbjct: 296 LKKAIQNDVDTARSFFAKQ 314


>gi|166713093|ref|ZP_02244300.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 338

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 8/321 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P    G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFPC---GSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +  SAE F+   LV  L  +
Sbjct: 60  REFFAPAAPPPRLTLARAKIEGLHGFGADSVGMLRFDGRLSKMSAEDFVHLALVGRLCAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD G+L   GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRGGDIGLLHALGEQHGFVAGEIAPVHLH-GERISATRIRELLVAGQF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +T + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PCTPALSGIYATWVHGVAETPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+++FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAYLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILESSYPLSERDR 320
            D ++AR +L +S      D 
Sbjct: 297 HDAEQARAVLAASPSQEPEDN 317


>gi|325954507|ref|YP_004238167.1| riboflavin biosynthesis protein RibF [Weeksella virosa DSM 16922]
 gi|323437125|gb|ADX67589.1| riboflavin biosynthesis protein RibF [Weeksella virosa DSM 16922]
          Length = 308

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/308 (34%), Positives = 171/308 (55%), Gaps = 9/308 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF +IE  Q++ N     V+ +G +DG+H GH  I++Q   IA   N    ++SF+PH
Sbjct: 1   MKVFSSIEACQNIQNP----VLTLGMYDGVHKGHQKIIQQLNTIAKEVNGESVLMSFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q    +  +S  S +++IL +      +   FT E +  SA  F+   L+  + V
Sbjct: 57  PRLVLQPDFDLELISTLSEKKEILAQNDLHNFVIQSFTREFSQVSARDFVVDYLIGKINV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G    FGK+R G+   L +  ++YGF+ V I+E+   +   +SS+ IR AL  G 
Sbjct: 117 HTLVIGYDHHFGKNREGNFEQLTELSKEYGFNVVRINEICEGE-TPISSTKIRKALKTGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           +  A + LGY FT+  +VIHG+K+GRTLGFPTAN++L    L  K GVY +  + +    
Sbjct: 176 IEYANNALGYNFTLTGEVIHGDKLGRTLGFPTANLKLPAYKLVPKTGVYVVHVQIEG-KL 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + G+ + G   T+  N  L +E  I DF  ++YG+  +V    ++R E KF  +E+L   
Sbjct: 235 HLGLLSIGYRETVTDNSELRVEVNILDFEGDLYGKILSVEIMGFIRNEKKFNSLEELTEA 294

Query: 298 MGEDEKKA 305
           M  D++ A
Sbjct: 295 MNHDKEYA 302


>gi|319786582|ref|YP_004146057.1| riboflavin biosynthesis protein RibF [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465094|gb|ADV26826.1| riboflavin biosynthesis protein RibF [Pseudoxanthomonas suwonensis
           11-1]
          Length = 316

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 110/316 (34%), Positives = 158/316 (50%), Gaps = 8/316 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHP 59
            +F +++     P   +G VV IG FDG+HLGH  ++  A+  A     P   LSF   P
Sbjct: 3   RLFRDVDGGSLCP---RGSVVCIGAFDGLHLGHRALVRHAVARARALDVPAVGLSFECLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+ P  + ++L   G   L   +F    A   AE F+++VL   L  +
Sbjct: 60  REFFARGNPPPRLTLPRDRIRLLLDQGLDHLGLLRFNAALAAMPAEDFVRRVLAGRLGAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD  +LQ  G + GF    I+ ++  + + VSS+ IR AL  G  
Sbjct: 120 EVWIGPEFRFGNRRGGDLALLQAMGAELGFQAAEIEPVQV-QGERVSSTRIREALVAGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
                LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          + 
Sbjct: 179 ARVGLLLGRPYAIGGRVVRGRQLGRTLGFPTANLRF-PKAPALSGIYATWVHGVAAQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF+ ++YG+   V F   LR E KF D+  L + M 
Sbjct: 238 SVSSFGTRPTVEGVEP-LLEAHLFDFAGDLYGRHIEVEFVAKLRDEEKFPDLPALTVQMQ 296

Query: 300 EDEKKARKILESSYPL 315
            D  +AR IL  S  L
Sbjct: 297 RDAGQARAILSESERL 312


>gi|161344765|ref|NP_441016.2| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Synechocystis sp. PCC 6803]
          Length = 313

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 109/315 (34%), Positives = 164/315 (52%), Gaps = 15/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGH----HLILEQAIKIANNSPITVLSFN 56
           M +     + Q+         +A+GNFDG+H GH      +++ A  + +     V+SFN
Sbjct: 1   MRILSTTNVLQT------PTAIALGNFDGVHRGHGVVLRQVMDFAQAVEHLLHPAVVSFN 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHPR+     +    L+P   +   L  +G   L+   FT + AN S +QF+Q +LVE L
Sbjct: 55  PHPRSFFSGRTQP-LLTPLPEKAAQLTAIGIEQLVLLPFTEKLANLSPKQFVQSILVEQL 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K +  G  F FG  R G+   LQ  G+++G  TV I +L    ++ +SSS IR AL +
Sbjct: 114 QAKFISVGQDFCFGHQRRGNVQDLQNLGQEFGI-TVAIAQLEQTDTERISSSRIRRALKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQD- 234
           G +  A HLLG  + +   V+ G+++GR LGFPTAN+ L  D L  K GVYA        
Sbjct: 173 GKLAMANHLLGRPYALRGTVVQGQQLGRKLGFPTANLCLPADKLWPKYGVYAGWVNLNAL 232

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 V N G  PT+    P   E  +  +S ++YGQ   V+   YLRPE KF  +++L
Sbjct: 233 DVPIPAVINLGDRPTVNGQEPSA-EVHLLQWSGDLYGQGLEVALTHYLRPETKFAGLDQL 291

Query: 295 KIYMGEDEKKARKIL 309
           K  + +D ++A K+L
Sbjct: 292 KNQIAQDCQQAEKLL 306


>gi|116872760|ref|YP_849541.1| riboflavin biosynthesis protein RibF [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116741638|emb|CAK20762.1| riboflavin biosynthesis protein RibF [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 314

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 167/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F    +D+ +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYANGR-FDVTIVDK-QTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF  EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHWEIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|228998585|ref|ZP_04158172.1| FMN adenylyltransferase [Bacillus mycoides Rock3-17]
 gi|228761053|gb|EEM10012.1| FMN adenylyltransferase [Bacillus mycoides Rock3-17]
          Length = 335

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           +H+ H  E N+     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 16  IHLTHPHEQNKI---ELPPTVMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPH 72

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  I+EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 73  PSVVLGKKEAHVEYITPLRIKEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLN 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 132 VKHVVAGFDYSYGRLGKGTMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 190 EMEQIPSILGRAYTVEGMVVHGDKRGRQIGFPTANIALSEEYLLPPVGVYAVRLKVHG-E 248

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   +   L +E  +F F+++IY Q  TV +   +R E KF  I+KL 
Sbjct: 249 WHDGVCNIGYKPTFKDDERNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDKLV 308

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   ++  +
Sbjct: 309 AQIAKDKKTAQEYFSTTKNI 328


>gi|68166038|gb|AAY87953.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
 gi|68166040|gb|AAY87954.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
 gi|68166042|gb|AAY87955.1| riboflavin kinase and FAD synthase-like protein [Listeria
           welshimeri]
          Length = 314

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F    +D+ +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 140 ADLERYANGR-FDVTIVDK-QTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|54066453|gb|AAV28537.1| riboflavin kinase and FAD synthase-like [Listeria welshimeri]
          Length = 313

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 20  VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 79

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+ K LV  L V  V+ G  + +GK   G  
Sbjct: 80  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDKYLVS-LNVSHVVAGFDYSYGKKGEGKM 138

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++      F    +D+ +   S  +SS+NIR A+++G +  A  LLGY +T +  VI
Sbjct: 139 ADLERYANGR-FDVTIVDK-QTAASDKISSTNIRRAISEGELEEANQLLGYPYTTKGTVI 196

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 197 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 255

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 256 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 310


>gi|146281349|ref|YP_001171502.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           stutzeri A1501]
 gi|145569554|gb|ABP78660.1| riboflavin kinase/FAD synthase [Pseudomonas stutzeri A1501]
          Length = 316

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/321 (32%), Positives = 153/321 (47%), Gaps = 7/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPRHRGCVATIGNFDGVHRGHQAILARLRERAAELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR           L+    + ++L++ G   ++   F       SA +F+   LVE L V
Sbjct: 58  PREYFSPDRAPARLTRLREKLQLLDEQGVDLVLCLAFNRRLRELSAAEFVHATLVEGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DRAGD   L K G   GF       +  +  + VSS+ +R  L  G 
Sbjct: 118 QHLEVGDDFRFGCDRAGDFDFLLKAGAAEGFTVEAATTIEVD-GERVSSTRLRQVLADGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F I   V+HG+K+GR LG PTAN+QL        GV+ +    +    +
Sbjct: 177 LGCAEALLGRPFAITGRVMHGQKLGRQLGAPTANVQLKRRNTPLSGVFVVTLEVEGNV-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GV N G  PT+  +G   LE  + D+  ++YG+   V+F   LR E +F  +E LK  +
Sbjct: 236 AGVVNIGMRPTVESDGQPHLEVHLLDYQGDLYGRLVQVTFHRKLRDEQRFASLEALKTAI 295

Query: 299 GEDEKKARKILESSYPLSERD 319
             D   AR    +S  ++ +D
Sbjct: 296 DADIAAARDYWRASSLMTSQD 316


>gi|269837290|ref|YP_003319518.1| riboflavin biosynthesis protein RibF [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786553|gb|ACZ38696.1| riboflavin biosynthesis protein RibF [Sphaerobacter thermophilus
           DSM 20745]
          Length = 331

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 13/319 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPR 60
            + H +    S P+     VV IGNFDG+H GH  +L+Q + +  + +    L+F+P P 
Sbjct: 4   QIVHGLSAIPSGPH-----VVTIGNFDGVHRGHQYLLKQVVDRATDGARSLALTFDPLPA 58

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++       L+    +   + + G   +    FT + A   A +F++++ V+      
Sbjct: 59  EVLRPDRAPKRLTTTDDRLTFMAETGLDVIAVVPFTRDFAALEAREFVEQL-VDAAHPVH 117

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            + G  FRFG DR G   +L++ G +YGF    ++ +     + +SS+ IR  L +G V 
Sbjct: 118 FVVGADFRFGHDRTGSADLLRELGPEYGFAVTVVERI---GGEEISSTRIRQLLAEGDVK 174

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ-DQTSY 238
            AA LLG   T+   V  G   GR LGFPTAN+ + P + +  +G+YA     +      
Sbjct: 175 AAAELLGRWHTLTGRVESGAGRGRNLGFPTANLAIPPALAIPADGIYAAHAALERGGDWL 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             +   G  PT       ++E F+ DF+ ++YG   TV F + +R ++ F+  E L   M
Sbjct: 235 PALVYIGTRPTFSEVD-RVVEVFLLDFTGDLYGSEVTVRFIERIRGDMTFESPEALTEQM 293

Query: 299 GEDEKKARKILESSYPLSE 317
             DE  AR+IL    P+S 
Sbjct: 294 HADEVAARRILAEFEPMSN 312


>gi|313207188|ref|YP_004046365.1| riboflavin biosynthesis protein ribf [Riemerella anatipestifer DSM
           15868]
 gi|312446504|gb|ADQ82859.1| riboflavin biosynthesis protein RibF [Riemerella anatipestifer DSM
           15868]
 gi|315022410|gb|EFT35437.1| FMN adenylyltransferase [Riemerella anatipestifer RA-YM]
 gi|325335372|gb|ADZ11646.1| FAD synthase [Riemerella anatipestifer RA-GD]
          Length = 306

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 109/306 (35%), Positives = 175/306 (57%), Gaps = 10/306 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V  +I   ++         ++IG FDG+HLGH  I++   KI++   ++  +L+F PH
Sbjct: 1   MKVISSISEYKN----TSPTALSIGMFDGVHLGHQSIIKNLKKISDEKKLSSGLLTFWPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRTI   +  +  L+  + +  ++E +G   L    F  +  N SA+ F++K+LV+ L V
Sbjct: 57  PRTIFNPNENLKLLNTLAEKTSLIENLGVDFLFLQNFDEDFRNLSADDFVKKILVDKLNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFGKD+ GD  +LQK   ++ F    +D ++  ++Q +SS+ IR A+T G 
Sbjct: 117 KHLIIGYDHRFGKDKKGDFNLLQKMATEFDFEVQQLDAIQ-LENQNISSTKIRNAITSGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
             +A  +LGY + +   VIHG+KIGRT+G+PTAN+ +    +L K+G Y +     D   
Sbjct: 176 FKSANDMLGYHYPLSGKVIHGKKIGRTIGYPTANISIDNIKLLPKKGAYIVEVWI-DNLF 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+ + G NPT+     L +E +I DF+++IY Q  T+ F D+L  EIKF  +E L   
Sbjct: 235 YKGMLSVGTNPTV-SGTELSIEVYILDFNKDIYDQDITIKFRDFLHEEIKFDGLEALIKK 293

Query: 298 MGEDEK 303
           + ED+ 
Sbjct: 294 LDEDKA 299


>gi|156741115|ref|YP_001431244.1| riboflavin biosynthesis protein RibF [Roseiflexus castenholzii DSM
           13941]
 gi|156232443|gb|ABU57226.1| riboflavin biosynthesis protein RibF [Roseiflexus castenholzii DSM
           13941]
          Length = 311

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + H +      P +    V+ IG FDG+H GH  ++   ++ A        VL+F+PH
Sbjct: 1   MKIVHGL----PQPINELPTVLTIGAFDGVHRGHAHLIGATVQRARAFGRQAAVLTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +   TL+    + +++  +G   +I   FT E    +A +F+ ++    + +
Sbjct: 57  PDVVVRPGNERPTLTTLVERAELIAALGVDLMIVIPFTTEIMALTAHEFMARLC-GAVAL 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F  G+ R GD   L   G+ +G+    ++    +  + VSS+ IR AL+ G 
Sbjct: 116 RELCIGWDFALGRGREGDASRLAAIGQTFGYAVHRVEPFLLD-GETVSSTRIRAALSVGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +  A  LLGY + +   ++ G++ GRT+GFPTAN+ + P  +L   GVY  R      T 
Sbjct: 175 IEAANRLLGYPYGLRGPIVEGDRRGRTIGFPTANINVDPRRMLPAHGVYVCRAVLNGVT- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  VAN G  PT        +E+++ DFS ++YG+   + F   LR E KF  +  L   
Sbjct: 234 YGAVANVGVRPTF-DGSRRTVEAYLLDFSGDVYGEELRLMFLHRLRGEHKFDGVAALVAQ 292

Query: 298 MGEDEKKARKILES 311
           +  D   AR  LE 
Sbjct: 293 ITRDVAAARAWLEE 306


>gi|325928649|ref|ZP_08189828.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas perforans
           91-118]
 gi|325540977|gb|EGD12540.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas perforans
           91-118]
          Length = 350

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 8/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +   AE F++  LV  L  +
Sbjct: 60  REFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMRAEDFVRLALVGRLRAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLH-GERISATRIRELLGAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +  + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAERPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILESSYPLSER 318
            D ++AR++L +     ++
Sbjct: 297 RDAEQAREVLAAQMHAEQQ 315


>gi|46907555|ref|YP_013944.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47094122|ref|ZP_00231845.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           4b H7858]
 gi|226223930|ref|YP_002758037.1| riboflavin kinase and FAD synthase [Listeria monocytogenes
           Clip81459]
 gi|254824612|ref|ZP_05229613.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           J1-194]
 gi|254852621|ref|ZP_05241969.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           R2-503]
 gi|254932356|ref|ZP_05265715.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           HPB2262]
 gi|255520237|ref|ZP_05387474.1| riboflavin kinase and FAD synthase [Listeria monocytogenes FSL
           J1-175]
 gi|300765431|ref|ZP_07075413.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N1-017]
 gi|46880823|gb|AAT04121.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47017507|gb|EAL08317.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           4b H7858]
 gi|225876392|emb|CAS05101.1| Putative riboflavin kinase and FAD synthase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605936|gb|EEW18544.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           R2-503]
 gi|293583912|gb|EFF95944.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes
           HPB2262]
 gi|293593850|gb|EFG01611.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           J1-194]
 gi|300513868|gb|EFK40933.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes FSL
           N1-017]
 gi|328468612|gb|EGF39612.1| riboflavin kinase and FAD synthase [Listeria monocytogenes 1816]
 gi|328475049|gb|EGF45837.1| riboflavin kinase and FAD synthase [Listeria monocytogenes 220]
 gi|332311772|gb|EGJ24867.1| Riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           Scott A]
          Length = 314

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 169/295 (57%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQAFVDNYLV-ALHVQHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +   F    +D+ +   S  +SS+NIR A+ +G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYADGR-FEVTIVDK-QTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAN 311


>gi|83814555|ref|YP_445892.1| riboflavin biosynthesis protein RibF [Salinibacter ruber DSM 13855]
 gi|83755949|gb|ABC44062.1| riboflavin biosynthesis protein RibF [Salinibacter ruber DSM 13855]
          Length = 311

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 8/310 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQS 65
           EI     +     VV +G FDG+H GH  I+E       A N P T++SF+PHPR ++  
Sbjct: 4   EIGWDAISRDPQSVVTVGTFDGVHRGHQAIIEYLQDRAEAQNGPSTLVSFDPHPRAVVH- 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
              +  L+  + +  +LE++G    +   F+ + A  S   ++++VLV+ + V+ +  G 
Sbjct: 63  DEEVPLLTTVAERADLLERLGLDRFVVVPFSDDFAQLSPTAYVEEVLVDRIGVQEITVGY 122

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TKGHVLNAAH 184
             RFGKDRAGD   L++ G +YGF    I     +    VSS  IR+ L  +G V  A  
Sbjct: 123 DHRFGKDRAGDVEALRELGGEYGFSVDVIPPQEVDHDV-VSSRTIRSLLVEEGRVEQATD 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVA 242
            LG  + ++  V  G+  GR LG+PTAN+ L  +  ++ K+GVYA      +     G+ 
Sbjct: 182 RLGRPYQLQGVVSRGQGRGRKLGYPTANLALGDARKLVPKQGVYATAVTLPNGDRRGGMM 241

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      + +E  + D+  ++YG   +V F   LR E KF+  E L   + EDE
Sbjct: 242 NIGSRPTF-DEMDVTVEVHLLDYEGDLYGASLSVEFLQRLRAEQKFESAEALAAQLSEDE 300

Query: 303 KKARKILESS 312
           ++ R ++ + 
Sbjct: 301 ERCRTVIRTQ 310


>gi|163839424|ref|YP_001623829.1| FMN adenylyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162952900|gb|ABY22415.1| riboflavin kinase [Renibacterium salmoninarum ATCC 33209]
          Length = 321

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 15/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  F+ I     +P      VV +GNFDG+H GH  +L   +       +    ++F+PH
Sbjct: 1   MQYFNGI---SDVPTGFGPSVVTLGNFDGVHRGHQEVLRNLVSDARKRGAKAVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  S    +   + +   +   G  A++   +TL+ A  SAE+F+Q   V+ L+ 
Sbjct: 58  PAKVHRPDSAPGQIMSLADRVATMAATGLDAVLVLHYTLDFAQQSAEEFVQSTFVDALKA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +V+ G   RFG+  +GD   +Q+ G K+GF    I E      +  SS+ +R AL  G 
Sbjct: 118 TSVVVGHDVRFGRGNSGDLATMQQLGTKFGFDVEVIGEF--GTERRCSSTWVREALDHGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  AA +LG    +   V+HG   GR LGFPTAN+       +  +G+YA     +  T 
Sbjct: 176 VRTAAEVLGRAHHMRGTVVHGAARGRELGFPTANLAPDSSGYIPADGIYAGWLLDEAATR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDI 291
           +    + G NPT        +E+ + D  +       +YGQ  TV F ++LR  + +   
Sbjct: 236 WPAAISVGSNPTFEGVS-RQVEAHVIDRPEEAVEDFNLYGQSVTVEFVEHLRGMVAYTGP 294

Query: 292 EKLKIYMGEDEKKARKILESSYPL 315
           E L   M +D  +AR++L++   L
Sbjct: 295 EALIEQMCKDVVQAREVLQADEAL 318


>gi|309389236|gb|ADO77116.1| riboflavin biosynthesis protein RibF [Halanaerobium praevalens DSM
           2228]
          Length = 307

 Score =  315 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 116/312 (37%), Positives = 172/312 (55%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  + + N    +      +AIG FDG+H GH LI+++AIKIA   N P  VLSF+PH
Sbjct: 1   MQVITSKDYNSFKSD---NTCLAIGAFDGLHKGHQLIIKRAIKIARKNNYPAAVLSFHPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  II   +P   +     +  +LE+MG       +F  E A+  AE FI  +L++ ++V
Sbjct: 58  PLKIIAGKNPPPAVVSRHQKISLLEEMGVDYYFEQEFNQEFAHLRAEDFINNILIDKIKV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G  FRF     G+  IL++ G+ + F    I +L  +  + +SS+ IR  L  G 
Sbjct: 118 NTIVVGDDFRFAYKNEGNVDILREMGKIHNFKAEIISQLHASDDR-ISSTRIRNLLKAGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  + I  +VIHG+K GR +GFPTAN++L     L  EGVYA++    DQ  
Sbjct: 177 LKQAKKLLGRPYQICGEVIHGKKRGRKMGFPTANLKLETNYALPPEGVYAVKVNI-DQQE 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G AN G NPT   N  +  E ++ DF ++IYG+R  V   +++R E +FK  E+L   
Sbjct: 236 YIGAANLGYNPTFN-NQEISFEVYLLDFKKDIYGKRLCVDLIEFIRGERQFKSKEELIEQ 294

Query: 298 MGEDEKKARKIL 309
           M +D    R++L
Sbjct: 295 MQQDILYTRQLL 306


>gi|172057843|ref|YP_001814303.1| riboflavin biosynthesis protein RibF [Exiguobacterium sibiricum
           255-15]
 gi|171990364|gb|ACB61286.1| riboflavin biosynthesis protein RibF [Exiguobacterium sibiricum
           255-15]
          Length = 309

 Score =  315 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + H   +           V+A+G FDG+HLGH  +L+ AI+ +   N P+ V++F+PH
Sbjct: 1   MDIIH---LTYPEQPTEDPAVIALGFFDGVHLGHQRVLQTAIEKSRELNLPVAVMTFDPH 57

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P+ ++   +  I  ++P   + + + ++G   +   +FT+  +  S + F+   L+    
Sbjct: 58  PKQVLGNGTEQILYITPLDRKLEKMAQLGIDRVYVIEFTVAFSELSPQDFVDHYLIAA-G 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  + +G+  AG    L         HT   +   +++   VSS+ IR  L  G
Sbjct: 117 ARHIVAGFDYSYGRFGAGKMATLDFHSRGRFDHTTVSEHQADDE--KVSSTRIRRLLADG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
            V  AA LLG  +  +  VIHG+  GR +GFPTAN++     ++ K GVYA     +D  
Sbjct: 175 AVAEAALLLGEPYQTKGIVIHGDARGRQIGFPTANIRPEFAYVIPKLGVYATFVHLEDGR 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + N GR PT    G + +E+ +  F +++YGQ   + +  YLR E  F  IE LK 
Sbjct: 235 KFPAMTNIGRRPTFYETGEVSIETHLLAFDEDLYGQELKLEWMAYLRDERAFDGIESLKT 294

Query: 297 YMGEDEKKARKIL 309
            + +D+  A + L
Sbjct: 295 QLAQDKIHAMQAL 307


>gi|296269049|ref|YP_003651681.1| riboflavin biosynthesis protein RibF [Thermobispora bispora DSM
           43833]
 gi|296091836|gb|ADG87788.1| riboflavin biosynthesis protein RibF [Thermobispora bispora DSM
           43833]
          Length = 315

 Score =  315 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/320 (30%), Positives = 158/320 (49%), Gaps = 17/320 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H ++    +P      VV IG FDG+HLGH  ++ +A+ +A     P   ++F+PH
Sbjct: 1   MQSWHGLD---EVPGDWGRSVVTIGVFDGVHLGHQRLVGRAVGLARELGLPAVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++L  +G  A+   +FTLE +  S ++F+Q  LV+ L  
Sbjct: 58  PDEVVRPGSHPPLLTGLRRRIELLASLGVDAVCVLRFTLELSRMSPDEFVQTALVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD   L+  GEKY F    +  + N     +SS+ IR  +  G 
Sbjct: 118 AHVVVGENFRFGHKAAGDVETLRTLGEKYDFAAEGVPLVSN--GVAISSTLIRERVAAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRT---- 232
           V  AA  LG    +E  V+ G + GR  LGFPTAN++  P   +  +GVYA         
Sbjct: 176 VAGAAAALGRPHRVEGVVVRGHQRGRALLGFPTANVESPPHTAIPADGVYAGWLECTQRP 235

Query: 233 --QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
              +   +    + G NPT        +E++  D    ++YG    V F + LR  ++F+
Sbjct: 236 SPYEGERWPAAISIGTNPTF-EGRERTVEAYALDRDDLDLYGAHVAVDFAERLRDTLRFE 294

Query: 290 DIEKLKIYMGEDEKKARKIL 309
            IE L   M ED ++ R+++
Sbjct: 295 SIEALIAQMREDVEQVRRLI 314


>gi|254497734|ref|ZP_05110507.1| riboflavin biosynthesis RibF [Legionella drancourtii LLAP12]
 gi|254353027|gb|EET11789.1| riboflavin biosynthesis RibF [Legionella drancourtii LLAP12]
          Length = 325

 Score =  315 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+         KG V  IGNFDG+HLGH  +++     A+    P+ ++ F P 
Sbjct: 1   MKLLRGIQHFSVFD---KGVVATIGNFDGVHLGHQNLIKVLRNKADALKLPLVLILFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q       LS    +  +L +     +   KF    A  +A  F    L   L V
Sbjct: 58  PREYFQKDKAPARLSSLREKLAVLRECQIDYIYCIKFDDLVAQTTATDFAHHYLFSMLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFGK+R GD  +L+    +Y        +   +  + +SS+ IRTAL +G+
Sbjct: 118 KHLVVGEDFRFGKNREGDVNLLKSLRSEYACEVQVYSDFCISDER-ISSTKIRTALQEGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG  ++I   V+HG+K GR  G PTAN+ L    +  +GV+ I+     Q   
Sbjct: 177 LKTAAKYLGRPYSICGRVMHGDKRGRQWGIPTANLGLHRLSVPLQGVFVIKALIASQQLV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G+ PT+  +  + LE  +FDF Q IYG+   V F   LR E+KF  ++ L   +
Sbjct: 237 YGVANIGKRPTVDGSKNI-LEVHLFDFDQSIYGELVQVFFLHKLRDEVKFTAVDALIAQI 295

Query: 299 GEDEKKARKILES 311
            +D   A+  + +
Sbjct: 296 YDDIAVAKAFVNN 308


>gi|30021898|ref|NP_833529.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus ATCC 14579]
 gi|218231861|ref|YP_002368610.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus B4264]
 gi|296504304|ref|YP_003666004.1| bifunctional riboflavin kinase/FMN [Bacillus thuringiensis BMB171]
 gi|29897454|gb|AAP10730.1| Riboflavin kinase [Bacillus cereus ATCC 14579]
 gi|218159818|gb|ACK59810.1| riboflavin biosynthesis protein RibF [Bacillus cereus B4264]
 gi|296325356|gb|ADH08284.1| bifunctional riboflavin kinase/FMN [Bacillus thuringiensis BMB171]
          Length = 323

 Score =  315 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 162/320 (50%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S   +
Sbjct: 297 EQIAKDKKTAQEYFMSEKNI 316


>gi|291302564|ref|YP_003513842.1| riboflavin biosynthesis protein RibF [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571784|gb|ADD44749.1| riboflavin biosynthesis protein RibF [Stackebrandtia nassauensis
           DSM 44728]
          Length = 314

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 89/314 (28%), Positives = 145/314 (46%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +  I+     P      VV IG FDG+H GH  ++ +A+  A  +     V++F+PH
Sbjct: 4   MQRWRGIDAT---PGSWGRSVVTIGVFDGVHRGHQHVIGRAVATAREAGVSSVVVTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L+    +  ++ ++G   L    FT E +  S   F + +L   L  
Sbjct: 61  PSEVVRPGTHPAVLTELDRRGDLIAELGADGLCVLPFTRELSQLSPRDFARDMLAGGLGA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AGD G L + G ++GF    +  +  + +   SS+ +R+ LT G 
Sbjct: 121 QHVVVGENFRFGHKAAGDTGTLAELGTEFGFTVEAVKPVGESATVF-SSTFVRSRLTDGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD-ILLKEGVYAIRFRTQD-Q 235
           V  AA  LG    +   V+ G   G T LGFPTAN++ +    +  + VYA         
Sbjct: 180 VEAAAEALGRPHRLSGMVVRGANRGGTQLGFPTANLRHAEHAAIPADAVYAGWLTWAGSP 239

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              +   + G NPT    G   +E+ I DF  +IYG+  ++ F   LR +  +  +  L 
Sbjct: 240 EPLAAAISVGTNPTFHGTG-RTVEAHILDFDTDIYGEPVSLDFVARLREQRTYDALPALI 298

Query: 296 IYMGEDEKKARKIL 309
             +  D    RK+L
Sbjct: 299 AQIDADVIDTRKVL 312


>gi|134296684|ref|YP_001120419.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia vietnamiensis G4]
 gi|134139841|gb|ABO55584.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia
           vietnamiensis G4]
          Length = 330

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE +GF    +D +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMDTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E K+ D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKYDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFVERARAPGSRATGFSTSATDRI 329


>gi|317121861|ref|YP_004101864.1| FMN adenylyltransferase; riboflavin kinase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591841|gb|ADU51137.1| FMN adenylyltransferase; riboflavin kinase [Thermaerobacter
           marianensis DSM 12885]
          Length = 327

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 153/312 (49%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V + IE  +      +   VA+G FDG+H GH  +L    A   A  +    L+F+PH
Sbjct: 1   MEVIYGIENWRG----SQPACVAVGTFDGVHRGHQALLRGAVAAAHAQQAVAVALTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        L     +  +    G    +  +F    A  SAE F + VL E L+ 
Sbjct: 57  PLAVLAPDRVPLLLGTLEDRLALFAAAGIDRALVMRFDRHLAQTSAEDFARGVLAERLQA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  FRFG+  AG    L++ G ++GF T  +  +R   +Q+VSSS +R  L  G 
Sbjct: 117 RAVFVGYNFRFGRGGAGTPEDLERWGSRWGFWTHVVPPVRV-GNQVVSSSRVRALLEAGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG  +++   V+ GE  G  LGFPTAN++L+ + +L   GVYA+  R  D   
Sbjct: 176 VEAAAEALGRLYSVAGRVVRGEGRGAGLGFPTANLELAANLVLPAPGVYAVWVRHGDALR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN GR PT    G L LE  + D + ++YGQ   V F   LR E +F   E+L   
Sbjct: 236 -PGVANLGRRPTF-GGGELRLEVHLLDGAADLYGQVLRVGFARRLREERRFAGPEELVSQ 293

Query: 298 MGEDEKKARKIL 309
           +  D + AR  L
Sbjct: 294 IRRDVEAARDAL 305


>gi|322382342|ref|ZP_08056249.1| riboflavin kinase/FMN adenylyltransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153695|gb|EFX46070.1| riboflavin kinase/FMN adenylyltransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 312

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFH-NIEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFN 56
           M + H N  I++S+ + L +  V+AIG FDG+HLGH  ++ +A+        P  V++F 
Sbjct: 2   MEMIHLNYPIDKSVISKLPEKQVMAIGQFDGVHLGHQEVIGRALSMASEKKIPSAVMTFY 61

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP+ ++        ++P   +   LEK+G        F       SAE F+++VL+  L
Sbjct: 62  PHPKEVLGQQIYTDVITPLDHKMDCLEKLGIDYAYVLHFDESLMKLSAETFVEEVLIP-L 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V  ++ G  F FG    G    L +      +    +     N     SS+ IR+AL  
Sbjct: 121 NVADLVIGFDFTFGYKGLGTPDKLIEWSNGR-YGVEVVSPFTQN-GIKTSSTEIRSALKD 178

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G V+ A  LLG  ++I   VI G++ GRT+GFPTANM +  P +    GVYA+    +  
Sbjct: 179 GDVMYANELLGRYYSIRGKVIGGDRRGRTIGFPTANMDIKEPYVTPAIGVYAVYTWVKG- 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y GV + G  PT   +  + LE  I DF + IYG+     F  +LRPE KF  +E L 
Sbjct: 238 KRYKGVMSIGTKPTFSSDKRITLEVHILDFHETIYGEDIQADFVCFLRPEKKFSSVEALV 297

Query: 296 IYMGEDEKKARKILE 310
             + +D K A   L 
Sbjct: 298 AQIQQDVKAAETKLA 312


>gi|294815436|ref|ZP_06774079.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
 gi|294328035|gb|EFG09678.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces clavuligerus ATCC 27064]
          Length = 351

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 12/312 (3%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRT 61
           +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  
Sbjct: 41  WRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELSVPSVVVTFDPHPSE 97

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +++  S    L+P   + +++ ++G  A++   FT   +  S   FI KVLV+ L    V
Sbjct: 98  VVRPGSHPPLLAPHHRRAELMAELGVDAVLILPFTAGFSQLSPADFIVKVLVDKLHACLV 157

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALTKGH 178
           + G  FRFG   AG    L + G  Y +    +D   +      Q  SS+  R  + +G 
Sbjct: 158 VEGPNFRFGHRAAGTVDFLAELGTSYDYAVEVVDLYVSGAAGGGQPFSSTLTRRLVAQGD 217

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA    T D   
Sbjct: 218 VAGAAEILGRPHRVEGIVVRGAQRGRELGYPTANVETLPHTAIPADGVYAGWL-TADGER 276

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                + G NP         +E++  D    ++YG    V F  Y+R + KF  +++L +
Sbjct: 277 MPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGQQKFASVDELLV 335

Query: 297 YMGEDEKKARKI 308
            M +D K+ R++
Sbjct: 336 AMADDVKQCREL 347


>gi|229918672|ref|YP_002887318.1| riboflavin biosynthesis protein RibF [Exiguobacterium sp. AT1b]
 gi|229470101|gb|ACQ71873.1| riboflavin biosynthesis protein RibF [Exiguobacterium sp. AT1b]
          Length = 308

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 7/300 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSS-SPIFT 71
             +   V+ +G FDG+H GH  ++  A  +   +N P+TV++F+PHP+ ++ +    +  
Sbjct: 12  PDVYPSVMVLGFFDGVHKGHQAVIHHAKRVAAEHNLPVTVVTFDPHPKQVLSNKPDAVRY 71

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++P S + K +E +G    +   FT E A  S +QF+   L+       V  G  + +GK
Sbjct: 72  ITPLSRKLKRIEALGVERCLVLTFTKELAGLSPQQFVDDYLIGA-GAVHVTAGFDYSYGK 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              G    L          +V  ++      + VSS+ IR  L +G V  A  LLG  + 
Sbjct: 131 FGEGTMETLPYHARDQFTTSVVTEQTMT--GEKVSSTRIRKLLAEGSVDEAHELLGSPYV 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           I  +VIHG+  GRT+GFPTAN+ +    ++ + GVYA R    D  ++  + N GR PT 
Sbjct: 189 ICGEVIHGDARGRTIGFPTANVLMDASYVMPRLGVYATRVTLPDGRTFRAMTNVGRRPTF 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G + +ES +FDFS+++YGQ   + +  Y+R E  F  ++ L   + EDE  AR IL 
Sbjct: 249 YETGSVSVESHLFDFSEDLYGQVIEIEWIQYIRNERAFDGLDALVAQLKEDEVAARSILS 308


>gi|206561061|ref|YP_002231826.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia J2315]
 gi|198037103|emb|CAR53024.1| putative riboflavin biosynthesis protein [Burkholderia cenocepacia
           J2315]
          Length = 330

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE++GF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQHGFEVEQMGTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFIERDRAPGSRATGFATSATDRI 329


>gi|329114392|ref|ZP_08243154.1| Riboflavin biosynthesis protein RibF [Acetobacter pomorum DM001]
 gi|326696468|gb|EGE48147.1| Riboflavin biosynthesis protein RibF [Acetobacter pomorum DM001]
          Length = 315

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 97/285 (34%), Positives = 146/285 (51%), Gaps = 1/285 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P    G   A+GNFDG+HLGH  ++        + P+ V++F PHPR + +   P F
Sbjct: 11  RDIPPEAHGCAAALGNFDGVHLGHAHLVHSTHAARPDLPLAVVTFEPHPRELFRPQDPPF 70

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS P  +   L+ +G   + +  F    +  +AE+F++ VL + L ++ V  G  F FG
Sbjct: 71  RLSLPDERFAALQALGVQHVFQIGFDEAFSRMTAERFVEDVLHDALCLRHVACGPDFAFG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   L +R  + G     +  L +      SS+ IR  L +G+   A   LG  +
Sbjct: 131 YRRGGDVTFLAERTGELGMGFTSVPALADAAGPY-SSTRIRRLLQEGYPERATEELGRPW 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V HG+K GR LGFPTAN+ L   +    GVYA+  R     +  GVAN GR PT+
Sbjct: 190 FIRGQVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVTVRLPGGYTRPGVANIGRRPTI 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                  +E  +FDF  ++YGQ  +V+    LRPE +F  +++LK
Sbjct: 250 NDGQESRVEVNLFDFDGDLYGQTLSVALHKMLRPEQRFAGLDELK 294


>gi|311747029|ref|ZP_07720814.1| riboflavin biosynthesis protein RibF [Algoriphagus sp. PR1]
 gi|126578730|gb|EAZ82894.1| riboflavin biosynthesis protein RibF [Algoriphagus sp. PR1]
          Length = 307

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 171/314 (54%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++  +     +PN     VV  G FDG+H+GH  IL++  +IA        +++F PH
Sbjct: 1   MKIYEGLSDIPQIPNP----VVTSGTFDGVHMGHQKILKRIREIARKIQGETVLITFWPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++      +  LS    + K+L   G   L+   FT + +  S+++FIQ+VLV+ ++
Sbjct: 57  PRLVLYPEEHNLRLLSTFEEKTKLLRSFGIDHLVTIPFTKDFSQLSSKEFIQRVLVDKIK 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G   RFGK+R G    LQ+   ++GF    I   ++ +   VSS+ IR AL  G
Sbjct: 117 TKKLVIGYDHRFGKNREGSFEYLQQHYHEFGFDLEEISR-QDVEEIGVSSTKIRHALENG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQ 235
            +  A+  LG  + +   VI G++IGR++GFPTAN+ +  D  ++ ++GVYA+       
Sbjct: 176 MIETASKYLGRPYELNGLVIKGQQIGRSIGFPTANIHIPNDYKLIPRDGVYAVEAVVNG- 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + N G  PT+       +E+ +FDF  ++Y ++ TV    +LR E KF+++++LK
Sbjct: 235 ALYKAMLNIGNRPTV-GGTKKTVEAHLFDFQGDLYDKQITVFLKGFLREEQKFENLDELK 293

Query: 296 IYMGEDEKKARKIL 309
             +  D+K A+ +L
Sbjct: 294 HQLAIDQKMAKSLL 307


>gi|145224605|ref|YP_001135283.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium gilvum PYR-GCK]
 gi|145217091|gb|ABP46495.1| FMN adenylyltransferase / riboflavin kinase [Mycobacterium gilvum
           PYR-GCK]
          Length = 307

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 17/307 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  ++ +A+K   +   P  +++F+PHP  ++   S    L+  + + 
Sbjct: 2   VTIGVFDGVHRGHQELIGRAVKAGRSRGVPTVLMTFDPHPMEVVFPGSHPAQLTTLTRRA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E+MG    +   FT +    + E+++ ++LVE L V  V+ G  F FGK  AG+  +
Sbjct: 62  ELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVERLHVVEVVVGDNFTFGKKAAGNVEL 121

Query: 140 LQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           L+K G+++GF       + E   +++   SS+ IR+ +  G ++ A   LG    +E  V
Sbjct: 122 LRKAGDRFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAGDMVAAEEALGRPHRVEGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ----------TSYSGVANFG 245
           + G+  GR LGFPTAN+       +  +GVYA  F                 Y    + G
Sbjct: 182 VRGDGRGRDLGFPTANVAPPMYAAIPADGVYAAWFTVLGHGPVVGTVTPGERYQAAVSVG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT        +E+F+ D   ++YGQ   V F   LR + KF  +  L   M  D ++A
Sbjct: 242 TNPTF-SGRTRTVEAFVLDTEADLYGQHVAVDFVARLRGQEKFGSVADLITAMEGDTERA 300

Query: 306 RKILESS 312
           R IL + 
Sbjct: 301 RTILSAQ 307


>gi|34499025|ref|NP_903240.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|34104875|gb|AAQ61232.1| riboflavin kinase [Chromobacterium violaceum ATCC 12472]
          Length = 311

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 107/314 (34%), Positives = 155/314 (49%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VF        LP    G  + IGNFDG+H GH  +LE+      A   P  +L+F PH
Sbjct: 1   MQVFLGDPRRFGLP----GCALTIGNFDGVHQGHRRMLERLRAEARARELPTALLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR     ++P   LS    +  +LE++G    +  Y+F    +N  A  F+ +VLV  L 
Sbjct: 57  PREFFVRANPPARLSTLRDKFSLLEELGLVDYVFVYRFNHSFSNMPARDFVDQVLVTELN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F+FG  R GD  +L        F T  +  +   K +  SS+ +R  L  G
Sbjct: 117 TRYLLIGDDFQFGSGRKGDFELLASCPR---FATEAMPSVLV-KGERASSTLVRERLGAG 172

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A  LLG  + I   V+HG+K+GRT+GFPTAN+ L       +GV+ +   T     
Sbjct: 173 DLDSANALLGGVYRISGKVMHGKKLGRTIGFPTANIHLPHLKPALQGVFVVEVDTPG-GR 231

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G NPT+       LE  +FDFS ++YGQR TV F   LR E ++ D+  L   
Sbjct: 232 LGGVASLGLNPTVSDTPDYKLEVHLFDFSGDLYGQRLTVRFLKKLRDEARYDDLATLVAQ 291

Query: 298 MGEDEKKARKILES 311
           +  D   A+  L S
Sbjct: 292 IERDAASAKTYLTS 305


>gi|89890031|ref|ZP_01201542.1| FAD synthase and riboflavin biosynthesis protein [Flavobacteria
           bacterium BBFL7]
 gi|89518304|gb|EAS20960.1| FAD synthase and riboflavin biosynthesis protein [Flavobacteria
           bacterium BBFL7]
          Length = 311

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 98/315 (31%), Positives = 169/315 (53%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +F NI   ++     KG VV IG FDG+H GH  IL++  +IA    +   +L+F PH
Sbjct: 1   MKIFENIASYKA----EKGAVVTIGTFDGVHQGHQKILKRVTEIAKQKSLTSVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S +  ++    ++ ++   G   ++ + F+LE A  SA  +++ +LV+ L  
Sbjct: 57  PRMVLQPDSDLKLINTIEERQLLIAANGIENIVTHPFSLEFARTSAHDYVKNILVDQLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G   RFG++RA     L++ G+++ F  V I + ++ +   VSS+ IR A+  G 
Sbjct: 117 AVVVIGYDHRFGRNRAASINELEEYGKEFNFKVVQISK-KDIEEVTVSSTKIRNAIESGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           +    + L   +++  D++ G+ IGRT+ +PTAN+++S    +L K GVY          
Sbjct: 176 METTRNYLNRPYSVTGDIVQGKAIGRTINYPTANLKVSKNYKLLPKNGVYITSSIIDGIV 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N G NPT+  +    +E++  DF+ ++Y  +  + F   LR E+KF  +E L  
Sbjct: 236 VY-GMTNIGVNPTISNDLKKTIETYYIDFTGDLYHTQMELFFHKRLRNELKFNSMEDLTA 294

Query: 297 YMGEDEKKARKILES 311
            M EDE   R  ++ 
Sbjct: 295 AMKEDELNTRTYVQQ 309


>gi|107023449|ref|YP_621776.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116690531|ref|YP_836154.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|105893638|gb|ABF76803.1| FMN adenylyltransferase [Burkholderia cenocepacia AU 1054]
 gi|116648620|gb|ABK09261.1| FMN adenylyltransferase [Burkholderia cenocepacia HI2424]
          Length = 330

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 97/322 (30%), Positives = 151/322 (46%), Gaps = 12/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D   AR         +ERDR
Sbjct: 297 ALDVANARAYF------TERDR 312


>gi|260220491|emb|CBA28081.1| Riboflavin biosynthesis protein ribF [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 344

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 108/337 (32%), Positives = 153/337 (45%), Gaps = 21/337 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF   +     P   +   V IGNFDG+H GH  +L            P  VL+F PH
Sbjct: 13  MKVFRGFK----HPGVAEACAVTIGNFDGVHRGHQAMLALLKSEAQQRGVPSCVLTFEPH 68

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L K G    I   F    AN S + FIQ+VL 
Sbjct: 69  PRDYFAKLHQKPELAPARVGTLRDKLDDLAKAGVDQTIVLPFDARLANQSPQDFIQQVLQ 128

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFGK RAGD  +L   GE  GF    ++    +    VSSS +R A
Sbjct: 129 DGLGARYVLVGDDFRFGKARAGDYALLDAAGEALGFDVARMNSYEVH-GLRVSSSAVREA 187

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +G + +AA LLG  + I   V+HG K+GRTLGF T N++ +       G++ +     
Sbjct: 188 LGQGRMQDAARLLGRPYCISGHVVHGRKLGRTLGFKTLNLRFAHWKPAASGIFVVLVHGL 247

Query: 234 DQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRP 284
                 GVAN G  P++ PN    G +LLE+   D+ +E+     YG+   V     L  
Sbjct: 248 AAKPLQGVANLGVRPSLDPNDVNRGRVLLETHCLDWPEELGTEGAYGKIIRVELLHKLHD 307

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
           E+K+  ++ L   + +D   AR  L +   L    RI
Sbjct: 308 ELKYDGLDALTQGIQKDRDDARAWLAAHISLPGGTRI 344


>gi|86751293|ref|YP_487789.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           HaA2]
 gi|86574321|gb|ABD08878.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 109/303 (35%), Positives = 155/303 (51%), Gaps = 5/303 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  F  I  +       +G VVA+GNFDG+HLGH  ++   +       +P   ++F PH
Sbjct: 1   MTGFAVIRDDTPASAIPRGAVVAMGNFDGVHLGHRAVIGACLDMARVRRAPALAVTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L+    + ++L   G    +  +F    A  +A  FI   L+  L V
Sbjct: 61  PRKFFSPDTPQFRLTDEPAKLRLLAGAGLDGAVVLRFDAARAATTAHDFIHHELIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK R G   +L       G     +    +     VSSS IR AL   H
Sbjct: 121 QGIAVGYDFHFGKGRGGSPAMLVGEAPALGIEVD-VQPHIDFGDHPVSSSAIRKALEDSH 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + +  +VIHGEK GR LG+PTAN++L P   LK G+YA+R   +    Y
Sbjct: 180 IAAATQMLGAPWFVTGEVIHGEKRGRDLGYPTANIRLDPQCGLKHGIYAVR-VGRGGKHY 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VANFGR PT   NG  LLE F+FDF++++YG+   V+F  ++R E KF+ IE L   M
Sbjct: 239 DAVANFGRRPTF-DNGAPLLEIFLFDFNEQLYGETLDVAFIAFIRDEEKFESIEALVRQM 297

Query: 299 GED 301
            +D
Sbjct: 298 DDD 300


>gi|75676725|ref|YP_319146.1| riboflavin kinase / FAD synthetase [Nitrobacter winogradskyi
           Nb-255]
 gi|74421595|gb|ABA05794.1| FMN adenylyltransferase [Nitrobacter winogradskyi Nb-255]
          Length = 327

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 165/314 (52%), Gaps = 7/314 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRT 61
           F  I          +GGVVA+GNFDG+HLGH  ++  A++       P   ++F PHPR 
Sbjct: 5   FTIIRDTAPADVIPRGGVVAMGNFDGVHLGHRAVIAAALRMARLRAKPALAMTFEPHPRK 64

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
               ++P F L+  + + ++L   G +  +   F    A  +A+ FI   L+E L V  V
Sbjct: 65  FFSPNTPQFRLTDETGKLRLLAGTGLAGAVVMTFDATRAGTTAQDFIHHDLIERLGVSAV 124

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  F FGK R G   +L     + G     +    + + + VSSS IR AL +  + N
Sbjct: 125 AVGYDFHFGKGRVGSPSLLVSEAPRLGIEVD-VQPHVDFEERPVSSSAIRMALAEAQIAN 183

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSY 238
           A  +LG  + +  +VIHGEK GR LG+PTAN+ L  D  L+ G+YA+R    + +D   +
Sbjct: 184 ATAMLGGPWFVTGEVIHGEKRGRGLGYPTANIHLDRDCGLRHGIYAVRVGHGKGKDHRRF 243

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT   NG  LLE F+FDF  ++YG    V+F  ++R E+KF   E L   M
Sbjct: 244 DGVASFGRRPTF-DNGAPLLEVFLFDFQGDLYGAILDVAFIGFIRDELKFDGAEALVRQM 302

Query: 299 GEDEKKARKILESS 312
            +D   AR  L ++
Sbjct: 303 DDDAACARIQLAAA 316


>gi|254482788|ref|ZP_05096025.1| riboflavin biosynthesis protein RibF [marine gamma proteobacterium
           HTCC2148]
 gi|214036869|gb|EEB77539.1| riboflavin biosynthesis protein RibF [marine gamma proteobacterium
           HTCC2148]
          Length = 295

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 3/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             IG FDG+HLGH  ++    + A     P  V+ F P PR           +     + 
Sbjct: 2   ATIGAFDGVHLGHQAVIHHLKEKAAELDLPSVVIVFEPLPREYFSPVEAPARIMSFREKF 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + +  +G   ++R +F       SA+QF+  V    L  K ++ G  FRFG DR GD   
Sbjct: 62  QAMADLGVDRVLRIRFNEALRAMSAQQFVDDVFAAGLGAKYLVLGDDFRFGNDRQGDVQF 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           +Q++GE +G+        +  + + +SS+ IR AL +     A  +LG  ++I   VI+G
Sbjct: 122 IQQQGESHGYDAGPTPT-QEWEGKRISSTRIRHALEQADFDRAETMLGRPYSISGKVIYG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            ++G+T+G PTAN++L        GVY +       T   GVAN G  PT+  +    LE
Sbjct: 181 RQLGQTIGTPTANLELCRLRAPLAGVYVVEVSGAGMTGARGVANVGVRPTVNDSIKANLE 240

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + D   E+YGQ   V+F   LR E+KF  +++LK  +  D +  R   +
Sbjct: 241 VHLLDREIELYGQHIEVTFRHKLRDEMKFDSVDELKTNIATDIENTRAWFQ 291


>gi|229006084|ref|ZP_04163772.1| FMN adenylyltransferase [Bacillus mycoides Rock1-4]
 gi|228755160|gb|EEM04517.1| FMN adenylyltransferase [Bacillus mycoides Rock1-4]
          Length = 335

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 165/320 (51%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           +H+ H  E N+     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 16  IHLTHPHEQNKI---ELPPTVMALGFFDGIHLGHQRVIRTAKKIADERGCKSAVITFHPH 72

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  I+EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 73  PSVVLGKKEAHVEYITPLRIKEKVIASLGIDMLYVVKFDESFAGLLPQQFVDEYII-GLN 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 132 VKHVVAGFDYSYGRLGKGTMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 190 EMEQIPSILGRAYTVEGMVVHGDKRGRQIGFPTANVALSEEYLLPPVGVYAVRLKVHG-E 248

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   +   L +E  +F F+++IY Q  TV +   +R E KF  I+KL 
Sbjct: 249 WHDGVCNIGYKPTFKDDERNLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDKLV 308

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   ++  +
Sbjct: 309 AQIAKDKKTAQEYFSTTKNI 328


>gi|110833319|ref|YP_692178.1| FAD pyrophosphorylase [Alcanivorax borkumensis SK2]
 gi|110646430|emb|CAL15906.1| FAD pyrophosphorylase [Alcanivorax borkumensis SK2]
          Length = 325

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 103/326 (31%), Positives = 153/326 (46%), Gaps = 21/326 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +   I    +L +  +G V  IGNFDG+H GH  IL+Q I  A    +  TV+ F P 
Sbjct: 1   MRLIRGI---HNLRDTHRGCVATIGNFDGVHQGHQRILDQVIAEARGRGLKATVMLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+      +    L     +   L + G   ++  +F     + +A+ F++ +LV+ L V
Sbjct: 58  PQEFFSPQTAPPRLMSLRDKLIALREAGVDQVLCLRFDERFRSLTAQAFVKGLLVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R GD   LQ+ G+++ F           +   VSS+ +R AL +G 
Sbjct: 118 EYLVVGDDFRFGCGRDGDFSYLQQAGKQFDFAVTDTAT-CEIEGDRVSSTRVRAALREGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V HG+KIGRTLG PT N+ L        GV+A+       T  
Sbjct: 177 FALAERLLGRPFAISGRVRHGDKIGRTLGLPTVNLALKRLQSPLHGVFAVAVTGAGLTDQ 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDF------SQE--------IYGQRCTVSFFDYLRP 284
            G AN G  PT+       LE ++ D+      S +        +YG   TV+F  Y+RP
Sbjct: 237 PGAANMGTRPTVN-GTENRLEVYLLDYGDPAGSSGDAQCSHQDSLYGAHLTVAFRHYVRP 295

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILE 310
           E KF D++ LK  + +D    R   +
Sbjct: 296 EEKFADLDLLKTAIRQDINAVRAFFD 321


>gi|120437823|ref|YP_863509.1| riboflavin kinase / FAD synthetase [Gramella forsetii KT0803]
 gi|117579973|emb|CAL68442.1| riboflavin kinase / FAD synthetase [Gramella forsetii KT0803]
          Length = 311

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 98/301 (32%), Positives = 170/301 (56%), Gaps = 7/301 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  VV IG FDG+H GH  I+E+ +    ANN    VL+F PHPR ++Q  S I  ++  
Sbjct: 14  RQTVVTIGTFDGVHAGHRKIIERLVNSANANNLDSVVLTFFPHPRMVLQKESGIQLINTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++ +L + G   L+ + FT + +  +A +F++ +LV  L+ K +I G   RFG++R  
Sbjct: 74  EERKNLLRETGIDHLVIHPFTHQFSRLTALEFVRDILVNKLKAKKIIIGYDHRFGRNRTA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++ G+ +GF    I + ++ +   VSS+ IR AL  G V  A   L + FT++  
Sbjct: 134 DINDLKQFGKDFGFEVEEISQ-QDVEQVAVSSTKIRNALLDGRVERANMYLQHPFTLKGT 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           ++ G  IG+ LGFPTAN++++ D  ++ K GVY +     D  + +G+ N G NPT+   
Sbjct: 193 IVRGRGIGKDLGFPTANLEVAEDYKLIPKNGVYVV-STIIDGKAVNGMMNIGTNPTV-GG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
               +ES+ FD  +++YG++  +     +R E KF  +  LK+ M +D+  +++ L+ ++
Sbjct: 251 KEKTIESYFFDLDKDLYGKQLEIELLVRIRDEKKFTSVNDLKVAMKQDQAFSKQYLKDNH 310

Query: 314 P 314
            
Sbjct: 311 A 311


>gi|255035040|ref|YP_003085661.1| riboflavin biosynthesis protein RibF [Dyadobacter fermentans DSM
           18053]
 gi|254947796|gb|ACT92496.1| riboflavin biosynthesis protein RibF [Dyadobacter fermentans DSM
           18053]
          Length = 308

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 166/314 (52%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M+++H+++  + L    + GVV  G FDG+HLGH  IL +  +I   S     VL+F PH
Sbjct: 1   MNIYHSLDSFEKL----EYGVVTSGTFDGVHLGHQKILARLKEITEQSGGESVVLTFWPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PRT++   S  +  LS    + ++  K+G   L    FT   +  ++E+FI+++LV+ + 
Sbjct: 57  PRTVVSEDSQDLQLLSTIEEKIELFSKLGIHHLAIVPFTRSFSELTSEEFIKEILVQKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G   RFG++R G    LQK   +YGF    I    + +   +SSS IR AL  G
Sbjct: 117 TKKLVIGYDHRFGRNREGSFEFLQKNCSEYGFEVEEIPR-EDIEHTAISSSRIRKALITG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
           H+  A  LLG  + +   V+ G+++GRT+GFPTAN+ +     ++   GVY +       
Sbjct: 176 HIHEANELLGRNYALSGTVVKGKQLGRTIGFPTANLYVHEAYKLIPMNGVY-VINAIHQG 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G+ N G  PT+       +E+ +FDF +EIYG+   +    YLRPE KF  ++ L 
Sbjct: 235 QRFKGMLNIGVRPTV-DGTVRTIEAHLFDFDKEIYGEDLQLELLHYLRPEQKFDGLDMLV 293

Query: 296 IYMGEDEKKARKIL 309
             +  D++ A    
Sbjct: 294 RQIKIDQENALAYF 307


>gi|77919745|ref|YP_357560.1| riboflavin biosynthesis protein RibF [Pelobacter carbinolicus DSM
           2380]
 gi|77545828|gb|ABA89390.1| FMN adenylyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 330

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +  ++   Q L   +   VV IGNFDGIHLGH  I  + +  +        V +F PH
Sbjct: 1   MKIIRDL---QDLETPIDKAVVTIGNFDGIHLGHREIFRRIVTRSREIGGTSVVYTFVPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++    +E ++E      LI   F+ + A   A +F+++VLVE + V
Sbjct: 58  PLKVLAPERAPELINTYPEKEVLIEASCIDVLICAPFSRDLAELPAHRFVREVLVEKIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  + FGKDR+GD  +L++ GE  GF    +D +    +   SS+ +R  + +G 
Sbjct: 118 SHLVVGYDYLFGKDRSGDIELLRRMGEHLGFSVEVLDPIATGDTVY-SSTRVRELVRRGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +   +LG  +T E  V+HG   G  LGFPTAN++   +++   GVYA++ +       
Sbjct: 177 MRDVVQVLGRHYTFEGRVVHGFGRGSKLGFPTANLKTDKELMPCPGVYAVKVKRGG-VLI 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G+NPT    G   +E  + DF  ++YG++  V F + LR E  F   E L   +
Sbjct: 236 DGVLNLGQNPTFCAAGSF-IEVHLLDFEGDLYGEKLRVYFVERLRDEKCFDGPESLMDAI 294

Query: 299 GEDEKKARKIL 309
            ED ++AR +L
Sbjct: 295 REDIRRARALL 305


>gi|167585707|ref|ZP_02378095.1| riboflavin biosynthesis protein RibF [Burkholderia ubonensis Bu]
          Length = 330

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G+
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVAGSDGARISSSGVRAALAAGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++      T  
Sbjct: 177 LAAAAQALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALMGIFVVQVHGLADTPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+V +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVVDSGRVLLEVHLLDWHGDAYGKLVRVEFLQKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKILES 311
            +D   AR    +
Sbjct: 297 AQDVANARAYFAA 309


>gi|145220361|ref|YP_001131070.1| FMN adenylyltransferase / riboflavin kinase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206525|gb|ABP37568.1| FMN adenylyltransferase / riboflavin kinase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 308

 Score =  314 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 93/292 (31%), Positives = 153/292 (52%), Gaps = 8/292 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS--SPIFTLS 73
           +   V +G+FDG+H GH  I+ + + IA    +   V++F PHPR +++     P+  L+
Sbjct: 15  EPSAVTVGSFDGVHRGHRKIISRMVSIARQRGLRSVVVTFEPHPRRVLKGGVSGPLGLLT 74

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + ++L+      L   +FT E A  S++ FI+ +LV  +  + V+ G    FG++R
Sbjct: 75  TLDEKVELLQAELVDMLCVVRFTPEFAVRSSDNFIRSLLVGEIGAECVVVGYDHGFGRNR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G    L++ G + GF  V +DE+R    +  SS+ IR+ L +G +  A   LG  + I 
Sbjct: 135 SGGGDELRRLGNELGFDVVEVDEVRIEH-EHFSSTRIRSLLAEGRMEEANSFLGAPYMIS 193

Query: 194 SDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ GE  GRT+GFPTAN+       +L K GVYA      D  +Y  + N G  PT+ 
Sbjct: 194 GTVVEGEGNGRTIGFPTANILPPDPHKLLPKAGVYAA-TTVIDGNAYRAIMNVGVRPTVS 252

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
             G   +E+ I  +S  +YG+    S   +LR E KF  ++ L+  + +D+K
Sbjct: 253 SLGVTTVEAHILGWSGSLYGRELRFSLLRFLRDEKKFDSLDALREQIEKDKK 304


>gi|294507802|ref|YP_003571860.1| Riboflavin biosynthesis protein [Salinibacter ruber M8]
 gi|294344130|emb|CBH24908.1| Riboflavin biosynthesis protein [Salinibacter ruber M8]
          Length = 311

 Score =  314 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 8/310 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQS 65
           EI     +     VV +G FDG+H GH  I+E       A N P T++SF+PHPR ++  
Sbjct: 4   EIGWDAISRDPQSVVTVGTFDGVHRGHQAIIEYLQDRAEAQNGPSTLVSFDPHPRAVVH- 62

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
              +  L+  + +  +LE++G    +   F+ + A  S   ++++VLV+ + V+ +  G 
Sbjct: 63  DEVVPLLTTVAERADLLERLGLDRFVVVPFSDDFAQLSPTAYVEEVLVDRIGVQEITVGY 122

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TKGHVLNAAH 184
             RFGKDRAGD   L++ G +YGF    I     +    VSS  IR+ L  +G V  A  
Sbjct: 123 DHRFGKDRAGDVEALREFGGEYGFSVDVIPPQEVDHDV-VSSRTIRSLLVEEGRVEQATD 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVA 242
            LG  + ++  V  G+  GR LG+PTAN+ L  +  ++ K+GVYA      +     G+ 
Sbjct: 182 RLGRPYQLQGVVSRGQGRGRKLGYPTANLALGDARKLVPKQGVYATAVTLPNGDRRGGMM 241

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      + +E  + D+  ++YG   +V F   LR E KF+  E L   + EDE
Sbjct: 242 NIGSRPTF-DEMDVTVEVHLLDYEGDLYGASLSVEFLQRLRAEQKFESAEALAAQLSEDE 300

Query: 303 KKARKILESS 312
           ++ R ++ + 
Sbjct: 301 ERCRTVIRTQ 310


>gi|330501954|ref|YP_004378823.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina NK-01]
 gi|328916240|gb|AEB57071.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           mendocina NK-01]
          Length = 299

 Score =  314 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 100/276 (36%), Positives = 141/276 (51%), Gaps = 4/276 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+H GH  IL +  + A     P  V+ F P PR      +    L+    + 
Sbjct: 2   VTIGNFDGVHRGHQAILARLRERAAELAVPSCVVIFEPQPREYFGPDTAPARLTRLRDKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L   G   ++   F       SA +F+Q+VLV+ L VK +  G  FRFG DRAGD   
Sbjct: 62  ALLAAEGVDMVLCLAFNRRLRELSAAEFVQRVLVDGLGVKDLEIGDDFRFGCDRAGDFEF 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+  G+++GF       +     + VSS+ +R AL  G    A  LLG  F I   V+HG
Sbjct: 122 LKAAGQRHGFSVEASTTVEVLGGR-VSSTRVRQALVDGDFELAEALLGRPFRIAGRVLHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +K+GR L  PTAN+QL    +   GVY +     D     GVAN G  P++  +G   LE
Sbjct: 181 QKLGRQLDAPTANIQLKRRKVPLTGVYLVSCEI-DGVIQPGVANIGVRPSVAGDGRAHLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + DF+ ++YG+R +V+F   LR E +F  +E LK
Sbjct: 240 VHLLDFAGDLYGRRLSVAFHHKLRDEQRFASLEALK 275


>gi|163794896|ref|ZP_02188865.1| Riboflavin kinase / FAD synthetase [alpha proteobacterium BAL199]
 gi|159179715|gb|EDP64242.1| Riboflavin kinase / FAD synthetase [alpha proteobacterium BAL199]
          Length = 313

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 10/301 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +  +++  +      +G V AIGNFDG+HLGH  ++ +A +IA +   P+ VL+F PH
Sbjct: 1   MKIVRSLDAVEP---QHRGAVAAIGNFDGVHLGHRAVIGEAARIAGDLHAPLAVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q  +  F L+    +   LE++G   L    F    A+ +AE F+  +L + L +
Sbjct: 58  PRRFFQPDAAAFRLTTSQGRASRLEELGVDVLFELPFDDAFAHVAAESFVDDILYDTLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FG  R G   +L +R    GF    +  +  +   + SSS IR  L +G 
Sbjct: 118 RHVVVGYDFNFGHRRRGTPDMLIERAGHLGFGATRVSAVHESDGAVYSSSRIRQCLAEGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---- 234
              AA LLG  + I+  V  G++ GRT+GFPTAN++L   I  K GVYA+R    D    
Sbjct: 178 PRGAASLLGSPWEIDGIVEEGDRRGRTIGFPTANLRLGSLICPKLGVYAVRAVLADGEGA 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T  +GVAN G  PT+   G +LLE+ +FD S E+YG+R  V   D++RPE KF  +++L
Sbjct: 238 GTWMTGVANLGVRPTVNDRG-VLLETHLFDRSIELYGRRLRVRLVDFIRPERKFGGLDEL 296

Query: 295 K 295
           K
Sbjct: 297 K 297


>gi|163941546|ref|YP_001646430.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           weihenstephanensis KBAB4]
 gi|163863743|gb|ABY44802.1| riboflavin biosynthesis protein RibF [Bacillus weihenstephanensis
           KBAB4]
          Length = 323

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 1   MKLIHLTHPHEQNKIELPPTVMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  ++E+I+  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 61  PSVVLGKKEAHVEYITPMRLKEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+++R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEYQEEKVSSTSLRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVEGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WHDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S   +
Sbjct: 297 AQIAQDKKVAQEYFASVKNI 316


>gi|254382102|ref|ZP_04997464.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Mg1]
 gi|194341009|gb|EDX21975.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Mg1]
          Length = 315

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 156/315 (49%), Gaps = 10/315 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PHP  +++  S 
Sbjct: 2   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVARARELGVPSVVVTFDPHPSEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + +++  +G  AL+   FT E +  S   FI KVLV+ L  + VI G  FR
Sbjct: 62  PPILAPYDRRAELMAGLGVDALLILPFTAEFSQLSPADFIVKVLVDKLHARAVIEGPNFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+   L++ G  Y +    +D +           SS+  R  + +G +  AA +
Sbjct: 122 FGHKAAGNVDFLRELGGTYDYEVDVVDLVERGEAGGGVPFSSTLARRLVAEGDMDGAAEI 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA    T D        + 
Sbjct: 182 LGRPHRVEGVVVRGAQRGRELGYPTANVETRPHTAIPADGVYAGWL-TADGERMPAAISV 240

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G N          +E++  D    ++YG+  TV F  Y+R   KF+ ++ L   + +D K
Sbjct: 241 GTNIQF-DATDRTVEAYAIDRIGLDLYGKHVTVDFLAYVRGMAKFESLDGLLEAIADDVK 299

Query: 304 KARKILESSYPLSER 318
           +AR +L  +Y    R
Sbjct: 300 RAR-VLTETYDAPRR 313


>gi|313623915|gb|EFR94025.1| riboflavin biosynthesis protein RibF [Listeria innocua FSL J1-023]
          Length = 314

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 166/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S + F+ K LV  L VK V+ G  + +GK   G  
Sbjct: 81  KAEKMADLGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVKHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LL   +T +  VI
Sbjct: 140 TELENYANGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLXXXYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEEDTRAYFAN 311


>gi|282898077|ref|ZP_06306072.1| hypothetical protein CRD_02645 [Raphidiopsis brookii D9]
 gi|281197221|gb|EFA72122.1| hypothetical protein CRD_02645 [Raphidiopsis brookii D9]
          Length = 333

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 21/325 (6%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-----ITVLSFNPHPR 60
           +I +  S    L    VA+G FDG+HLGH  ++E                TV++F+PHP 
Sbjct: 10  SIWVAASTDQILTPTAVALGKFDGVHLGHQRVIEPVRNSHTQDNIKSIYSTVVTFDPHPE 69

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S  P   L+P   + + L+ +G   L+   F  E +  S   F++K+LV+ L+ + 
Sbjct: 70  EFF-SGQPRTLLTPLVEKIECLQGLGIDQLVLLPFDRELSALSPRDFVEKILVQQLQCQK 128

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR------------NNKSQIVSSS 168
           +  G  F FG+ R G    LQ     Y      +                + +   +S+S
Sbjct: 129 ISVGEDFCFGQKRLGTARDLQILAGFYNIPVNIVPIQMDMINLPANDGALDGQDNRISTS 188

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYA 227
            IR +L+ G +  A  LLG  +T+   V+ G+K+GRT+GFPTAN+QLS D  L  +GVYA
Sbjct: 189 LIRESLSLGDIPRANRLLGRPYTLSGIVVTGKKLGRTIGFPTANLQLSQDKFLPLQGVYA 248

Query: 228 IRFRTQ-DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
           +R  T        GV N G  PT+     L +E  +FD+  ++YG++  V    +LRPE 
Sbjct: 249 VRVLTDTSPQVILGVMNIGNRPTVN-GYSLSVEVHLFDWEGDLYGKQLVVELVKFLRPEQ 307

Query: 287 KFKDIEKLKIYMGEDEKKARKILES 311
            F ++E LK  +  D   A+ +  +
Sbjct: 308 NFPNLEALKRQIQTDCVSAKNLFAA 332


>gi|188992579|ref|YP_001904589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167734339|emb|CAP52549.1| Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Xanthomonas campestris pv.
           campestris]
          Length = 362

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P+   G VV IG FDG+HLGH  ++  A++ A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFPH---GSVVCIGAFDGLHLGHQALVRHAVERARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R    + +P   L+    + + L   G  ++   +F    +  SA+ F++  LV  L  +
Sbjct: 60  REFFANDTPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSAMSAQDFVRLALVGRLCAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R GD  +L+  GE++GF    I  +   + + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRGGDIALLRALGEQHGFAAGEIAPVH-LRGERISATRIRELLVAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++ +       G+YA          + 
Sbjct: 179 AHAGELLGRPYAIGGRVVRGKQLGRTLGYPTANLRFAR-TPALSGIYATWVHGVAAHPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF   +YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGIEP-LLEAHLFDFQGNLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR +L +
Sbjct: 297 RDAEQARAVLAA 308


>gi|78046845|ref|YP_363020.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78035275|emb|CAJ22920.1| riboflavin biosynthesis protein RibF (riboflavin kinase/FMN
           adenylyltransferase) [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 350

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +   AE F++  LV  L  +
Sbjct: 60  REFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMRAEDFVRLALVGRLRAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLH-GERISATRIRELLGAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +  + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAERPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR++L +
Sbjct: 297 RDAEQAREVLAA 308


>gi|298207391|ref|YP_003715570.1| Riboflavin kinase / FAD synthetase [Croceibacter atlanticus
           HTCC2559]
 gi|83850027|gb|EAP87895.1| Riboflavin kinase / FAD synthetase [Croceibacter atlanticus
           HTCC2559]
          Length = 307

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/296 (33%), Positives = 164/296 (55%), Gaps = 6/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  VV IG FDG+H+GH  I+ + +  A      +L+F PHPR ++Q  + I  L     
Sbjct: 14  KNTVVTIGTFDGVHIGHQKIVNRLVNQA-ELDSVILTFFPHPRMVLQQDNTIKLLHTIEE 72

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +LE++G   L+ + FT E +  +A+QF++ +LV  L+ K +I G   RFG++R  D 
Sbjct: 73  KTTVLEQLGLDHLVIHPFTKEFSRLTAQQFVENILVNQLKAKKIIIGYDHRFGRNRTADI 132

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              +  GE+YGF    I + ++     VSS+ IRTAL KG +  A   LG  + +   ++
Sbjct: 133 STFKDFGEQYGFVVEEITK-QDVDDVAVSSTKIRTALQKGQIEKANAFLGQPYMLTGTIV 191

Query: 198 HGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            G+ IG+TLG+PTAN+Q+     ++ K GVY ++   +  T Y G+ N G NPT+     
Sbjct: 192 KGKGIGKTLGYPTANIQIEEAYKLIPKNGVYIVKTNFKGIT-YFGMMNIGTNPTV-GGKS 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +E++ F+   ++YG + T+     +R E KF  +++L   M  DEK +   +E+
Sbjct: 250 QTIETYFFNMDTDLYGSKMTIQMLKRIRDEKKFASVDQLIEAMQNDEKISINYIET 305


>gi|315282185|ref|ZP_07870648.1| riboflavin biosynthesis protein RibF [Listeria marthii FSL S4-120]
 gi|313614171|gb|EFR87852.1| riboflavin biosynthesis protein RibF [Listeria marthii FSL S4-120]
          Length = 314

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA ++A    +   VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQSVIKQAKQLAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + ++G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAELGVDIMYVVRFTTQFSELSPQDFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L    +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 NDLADYAKGR-FEVTVVDK-QTAASDKISSTNIRRAITEGELEVANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAK 311


>gi|300858691|ref|YP_003783674.1| riboflavin kinase/FMN adenylyltransferase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686145|gb|ADK29067.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206401|gb|ADL10743.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis C231]
 gi|302330957|gb|ADL21151.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276644|gb|ADO26543.1| Putative Riboflavin biosynthesis protein ribF [Corynebacterium
           pseudotuberculosis I19]
          Length = 332

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 19/327 (5%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            ++H+IE    +P  L   V+ IG FDG+H GH  ++  A + A     P  +++FNPHP
Sbjct: 8   DIWHHIE---DIPADLDASVITIGVFDGVHRGHRTLISAATQRARVLGVPSILVTFNPHP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++       L   + +  +++ +G   ++   FT   +  S E F   ++ + L+ K
Sbjct: 65  LAVLRPEKMPPLLGTVAQRANLVKNLGVDHMLAMNFTANLSQLSPEDFFVSIIKDKLKAK 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FG   AG+   L+K GE YG   + + EL      IVSSS IR AL +G V
Sbjct: 125 VVVVGENFTFGYKAAGNTETLKKLGEDYGIE-IRVLELLAEDQTIVSSSVIRKALAEGDV 183

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRT----- 232
             A   LG  F++  DV+ G   G   LG+PTAN+     I L ++GVYA   +      
Sbjct: 184 RRAKWGLGREFSVSGDVVRGAGRGGKELGYPTANLYFPDSIALPEDGVYAGWLQITSAAP 243

Query: 233 -----QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT   +    +ESF+ D   ++YG   TV F D +R  +K
Sbjct: 244 IDGDMVAGVRYPAAISVGHNPTF-GDQRRSVESFVLDRQADLYGHSVTVEFVDRIRGMVK 302

Query: 288 FKDIEKLKIYMGEDEKKARKILESSYP 314
           F  +E+L   + +D +  R+IL    P
Sbjct: 303 FSGMEELLEAIAKDVEATREILRVDEP 329


>gi|71908660|ref|YP_286247.1| FMN adenylyltransferase / riboflavin kinase [Dechloromonas
           aromatica RCB]
 gi|71848281|gb|AAZ47777.1| FMN adenylyltransferase / riboflavin kinase [Dechloromonas
           aromatica RCB]
          Length = 306

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 109/297 (36%), Positives = 162/297 (54%), Gaps = 9/297 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M VF         P      V+AIGNFDG+HLGH  ++ +  ++A N  +   VL+F PH
Sbjct: 1   MRVFRGHSRPVVAPV-----VLAIGNFDGVHLGHAALIRRLAEVAENCQLAPMVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      S    LS    + ++L   G S ++   F    +  SAE+FI++VLV   +V
Sbjct: 56  PREFFAPESAPARLSTLREKLELLGDSGVSQVMICPFNGAFSALSAEEFIEQVLVRGCQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  FRFG+ R GD  +LQ+ G+++GF    +  +     + VSSS +R AL  G 
Sbjct: 116 RHLIIGDDFRFGRGRTGDFALLQEAGQRFGFTVEAMGSV-TVAGERVSSSAVRKALAIGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA LLG  + I+  V HG+K+GR LGF TAN+++  + L   GV+A+      + + 
Sbjct: 175 MEHAALLLGRPYIIDGQVSHGQKLGRQLGFATANLRIKHNPLPMSGVFAVEVSGLGEQAL 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            GVAN G  PT+      LLE  +FDF ++IYG   +V F   LR E +F + + LK
Sbjct: 235 PGVANLGIRPTV-GGTRPLLEVHLFDFDRDIYGAHISVRFVHKLRNEQRFPNFDALK 290


>gi|229104371|ref|ZP_04235040.1| FMN adenylyltransferase [Bacillus cereus Rock3-28]
 gi|229117295|ref|ZP_04246673.1| FMN adenylyltransferase [Bacillus cereus Rock1-3]
 gi|228666195|gb|EEL21659.1| FMN adenylyltransferase [Bacillus cereus Rock1-3]
 gi|228679069|gb|EEL33277.1| FMN adenylyltransferase [Bacillus cereus Rock3-28]
          Length = 335

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHVEYITPMRDKEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFASEKNI 328


>gi|169831093|ref|YP_001717075.1| riboflavin biosynthesis protein RibF [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637937|gb|ACA59443.1| riboflavin biosynthesis protein RibF [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 308

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/303 (33%), Positives = 159/303 (52%), Gaps = 6/303 (1%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSS 67
            ++L       V+ +GNFDG+HLGH  ++ + ++ A        + +F+PHP ++++   
Sbjct: 7   FKNLRQDYPRLVLGLGNFDGVHLGHQELIRRMVERARRLGGVPGIFTFHPHPVSVLRPEH 66

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L     +E+I+  +G   L+R  FTLE A  S E+FI+ VL   L V +V  G  +
Sbjct: 67  APPLLLTQETKEEIIAGLGVRLLLRIPFTLEFARLSPEEFIRDVLYTQLGVVSVFVGYNY 126

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG    G    L +  + YGF T  ++ +     ++VSS+ IR  L++G V  A   LG
Sbjct: 127 TFGHRGRGTPATLAQLSQIYGFETNVVEPV-EVAGEVVSSTRIRELLSRGRVEEARRFLG 185

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGR 246
           +   ++  V+ G+  GR LGFPTAN++ SPDIL    GVYA++     Q  +SGVAN G 
Sbjct: 186 FAPFVDGMVVSGDGRGRRLGFPTANLETSPDILIPANGVYAVKAEISGQ-RHSGVANIGY 244

Query: 247 NPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT    +    LE  +FD +  +YG+   V F  Y+R E KF    +L   +  D ++A
Sbjct: 245 RPTFTGADSGRNLEVHLFDVADNLYGKSMRVFFSRYIRGERKFGSPAELIRQIEADIRQA 304

Query: 306 RKI 308
           R +
Sbjct: 305 RAV 307


>gi|145593927|ref|YP_001158224.1| riboflavin biosynthesis protein RibF [Salinispora tropica CNB-440]
 gi|145303264|gb|ABP53846.1| riboflavin kinase / FMN adenylyltransferase [Salinispora tropica
           CNB-440]
          Length = 309

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +   +   + P      VV IG FDG+H GH  I+  A+  A        V++F+PH
Sbjct: 1   MQRWRGYD---AAPGGWGRSVVTIGVFDGVHRGHQAIIGHAVARARELGVKSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+ P+ + +++E +G   L    FT + +  SAE F+  VLVE L  
Sbjct: 58  PAEVVRPGSHPAVLTEPTRKAELIEALGVDVLCVLPFTPDFSRLSAEAFVHDVLVEHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G  +G+       L      I SS+ IR+ +  G 
Sbjct: 118 ALVVVGENFRFGHRAAGDVALLEQLGRTFGYAVEG-APLVAEAGTIFSSTYIRSCVAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-T 236
           V+ AA  LG    +E  V+ G++ GR LGFPTAN+       +  +GVYA R   + Q  
Sbjct: 177 VVAAASALGRPHRLEGVVVRGDRRGRELGFPTANLLCHRYAAVPADGVYAARLVRRGQRE 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                 + G NP+        +E+++ DF  ++YG+R  + F  +LR ++++  IE L  
Sbjct: 237 PLMSAVSIGTNPSF-SGRERRVEAYVLDFDADLYGERLALDFVAHLRGQVRYDSIEPLVA 295

Query: 297 YMGEDEKKARKIL 309
            + ED ++ R+ L
Sbjct: 296 QIAEDVERTRQAL 308


>gi|229086361|ref|ZP_04218538.1| FMN adenylyltransferase [Bacillus cereus Rock3-44]
 gi|228696973|gb|EEL49781.1| FMN adenylyltransferase [Bacillus cereus Rock3-44]
          Length = 323

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 1   MKLIHLTHPHKQNKIELPPTVMALGFFDGIHLGHQRVIRTAKKIADERGYKSAVITFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P S++EK++  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 61  PSVVLGKKEAHVEYITPLSMKEKVIADLGIDVLYVVKFDESFAGLLPQQFVDEYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ L    +L   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVEGTVVHGDKRGRQIGFPTANVALREEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   +   L +E  +F F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WHDGVCNIGYKPTFKEDERKLSIEVHLFHFNEDIYDQVVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D++ A++   ++  +
Sbjct: 297 AQIAKDKQTAQEYFSTAKNI 316


>gi|194014476|ref|ZP_03053093.1| riboflavin biosynthesis protein RibF [Bacillus pumilus ATCC 7061]
 gi|194013502|gb|EDW23067.1| riboflavin biosynthesis protein RibF [Bacillus pumilus ATCC 7061]
          Length = 321

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  +++ A  IA      + V++F+PH
Sbjct: 1   MKTIHISHPHTLNQKDQDPSVMALGYFDGVHLGHQKVIDAAKSIARKEGLALAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++Q +      ++P   +   +E++G   L   +F+   A  S ++F+ +  ++ L 
Sbjct: 61  PSHVLQKAREPKDLITPLEDKIDFIEQLGADYLYIVQFSESFAALSPQEFVDQY-LDELN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK  + G  F FG+  AG      + G+     T+      +N+ + VSS+ IR+AL  G
Sbjct: 120 VKHAVAGFDFTFGRFGAGTMETFDEYGKGRIMATIV--PKLSNQDRKVSSTLIRSALKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
            V   + LLG  + +   VIHG+K GRT+GFPTAN+ LS   I+   GVYA+R   +   
Sbjct: 178 DVEYVSELLGKPYQLRGIVIHGDKRGRTIGFPTANVGLSAEYIIPPTGVYAVRAEVKG-K 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT     P    +E  +FDF++EIYG+   + +F  +R E KF  I++L
Sbjct: 237 VYDGVCNVGYKPTFYEKRPDQPAIEVNLFDFNEEIYGEPIKLQWFKRIRSEQKFNGIQEL 296

Query: 295 KIYMGEDEKKARKILE 310
              + +D+++A +  +
Sbjct: 297 TAQISQDKEEAIQFFQ 312


>gi|115352609|ref|YP_774448.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia ambifaria AMMD]
 gi|115282597|gb|ABI88114.1| FMN adenylyltransferase / riboflavin kinase [Burkholderia ambifaria
           AMMD]
          Length = 345

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 14/329 (4%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +     ++    + + L + G   ++   F    A+ S + F+++ LV  L  + ++
Sbjct: 76  FNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHTRWMM 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G +  A
Sbjct: 136 VGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISSSGVRAALAAGDLDAA 195

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++          GVA
Sbjct: 196 AQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPLPGVA 255

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +  D 
Sbjct: 256 SLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAIALDV 315

Query: 303 KKARKIL----------ESSYPLSERDRI 321
             AR              + +  S  DRI
Sbjct: 316 ANARAYFVERERAPGSRATGFSTSATDRI 344


>gi|91978501|ref|YP_571160.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisB5]
 gi|91684957|gb|ABE41259.1| FMN adenylyltransferase / riboflavin kinase [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 111/303 (36%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  F  I  +       KG VVA+GNFDG+H GH  ++   ++      +P   ++F PH
Sbjct: 1   MTGFAVIRDDTPASAIPKGAVVAMGNFDGVHRGHRAVIGACLEMARVRRAPAFAVTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L+    + ++L   G    +  +F    A  +A  FI   LV  L V
Sbjct: 61  PRKFFSPDTPQFRLTDEPAKLRLLAGAGLDGAVVLRFDAARAATTAHDFINHELVGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK R G   +L       G     +    +     VSSS IR AL +GH
Sbjct: 121 QGIAVGYDFHFGKGRGGSPSLLVAEAPALGIEVD-VQPHIDFGDHPVSSSAIRRALEEGH 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + I  +VIHGEK GR LG+PTAN++L P   LK G+YA+R   +    Y
Sbjct: 180 IAAATEMLGSPWFITGEVIHGEKRGRELGYPTANIRLDPHCGLKHGIYAVR-VGRGGKHY 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VANFGR PT   NG  LLE+F+FDF+  +YG+R  ++F  ++R E KF+  E L   M
Sbjct: 239 DAVANFGRRPTF-DNGAPLLETFLFDFNGSLYGERLDIAFIAFIRDEEKFESAEALVRQM 297

Query: 299 GED 301
            +D
Sbjct: 298 DDD 300


>gi|108804253|ref|YP_644190.1| riboflavin kinase/FMN adenylyltransferase [Rubrobacter xylanophilus
           DSM 9941]
 gi|108765496|gb|ABG04378.1| riboflavin kinase / FMN adenylyltransferase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 299

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 4/299 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSP 74
           ++G VVAIGNFDG+HLGH  +L +A++      + V+  +F+PHPR +++       L+P
Sbjct: 1   MRGVVVAIGNFDGVHLGHRAVLGRALEEGRARGMRVVAATFHPHPRAVLRPGEAPPLLTP 60

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             ++ +I+  +G   +   +F  + +  S E+F+++VLV  L     + G  FRFG   A
Sbjct: 61  LPVRRRIILGLGVDEVRIIRFDGKLSRKSPEEFVREVLVGELGAAVAVVGENFRFGHRAA 120

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD   L++    +G   V +     +  + VSSS IR  + +G V  AA LLG    +  
Sbjct: 121 GDFRELERLMRSFGGEAVAVPVRGLDGGEEVSSSRIRRLVLEGRVEEAARLLGRPHAVCG 180

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+ GE  G  +G+PTAN++    + +   GVYA   R   +  Y+   N G  PT    
Sbjct: 181 RVVEGEGRGSRIGYPTANVRPEEGVAVPGRGVYACTVRV-GEGRYAACTNVGVAPTFGGR 239

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              L+E+ + DF  ++YG +  V F   +R E KF  +E+L+  +  D  +AR+I  ++
Sbjct: 240 AESLVEAHLLDFEGDLYGLQIEVEFLRRIRGEKKFGGVEELREQIARDLLEARRITNAT 298


>gi|47095914|ref|ZP_00233517.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           1/2a F6854]
 gi|254898506|ref|ZP_05258430.1| hypothetical protein LmonJ_01785 [Listeria monocytogenes J0161]
 gi|254912003|ref|ZP_05262015.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes J2818]
 gi|254936330|ref|ZP_05268027.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes F6900]
 gi|47015660|gb|EAL06590.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes str.
           1/2a F6854]
 gi|258608920|gb|EEW21528.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes F6900]
 gi|293589967|gb|EFF98301.1| riboflavin biosynthesis protein RibF [Listeria monocytogenes J2818]
          Length = 314

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +I         VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   +V  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYVV-ALHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R    +
Sbjct: 257 SIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAN 311


>gi|150024343|ref|YP_001295169.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Flavobacterium psychrophilum JIP02/86]
 gi|149770884|emb|CAL42349.1| Bifunctional riboflavin biosynthesis protein RibF : Riboflavin
           kinase and FMN adenylyltransferase [Flavobacterium
           psychrophilum JIP02/86]
          Length = 310

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VF++I   +      K  V  +G FDG+HLGH  I+ + +      +    VL+F+ H
Sbjct: 1   MKVFYSISDFKC----EKKTVATLGTFDGVHLGHQKIISRLLNNTQNKHLESVVLTFSQH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+++Q  S I  L+  + +  +LEK G   LI + F    +  + E F++ +LV+ L +
Sbjct: 57  PRSVLQVESNIKLLNTNAEKIALLEKKGIDNLIIHPFDASFSELTGEDFVKNILVDQLNI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFGK+RA D   L   G+KY F    I   +      +SS+ IR A+  G+
Sbjct: 117 KKIIIGYDHRFGKNRASDIHDLIYFGKKYHFDVEQISA-KEIDEISISSTKIRKAIQDGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           +  A   LGY +    +VI G+++GRT+GFPTAN+ +     I+ K GVY +    Q + 
Sbjct: 176 IKLANQYLGYNYLFAGNVIRGQQLGRTIGFPTANISIENTQKIIPKNGVYIVEGSWQGKN 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + G+ N G  PT+       +E   F+ ++++Y    T+S  +++R E+KF  IE+LK 
Sbjct: 236 -HQGMMNIGTKPTV-DGKNTTIEVHFFNLNEDLYNLEITISVCEFIRAEVKFNSIEELKR 293

Query: 297 YMGEDEKKARKIL 309
            + +D+  +    
Sbjct: 294 QLQQDKIISLDYF 306


>gi|283852347|ref|ZP_06369618.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. FW1012B]
 gi|283572304|gb|EFC20293.1| riboflavin biosynthesis protein RibF [Desulfovibrio sp. FW1012B]
          Length = 312

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/303 (33%), Positives = 161/303 (53%), Gaps = 5/303 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSP 68
           + +   L G  + IGNFDG+H+GH  +L++    A  + +     +F+PHPR ++  ++ 
Sbjct: 8   EDIHEALNGVCLTIGNFDGVHMGHVKLLQRVRDRAAAASLVSAALTFDPHPRRVLLGNAA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              ++    + + +E +G    +   FT E A    E F++++LVE L ++ ++ G  + 
Sbjct: 68  PPAITSTEHKLECIEAVGIQVAVVLPFTRELAAREPEDFVREILVEGLSLRQLVIGYDYA 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G+  +L   G+KYGF    +D +  N +  VSS+ IR  +  G V +A  LLG 
Sbjct: 128 FGKGRKGNFELLSALGQKYGFGVERLDPVIINGAV-VSSTRIRDMVQAGQVWDARPLLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
              +   V HG+K GR LGFPTAN+ L  +++   GVYA+    +      GVAN GRNP
Sbjct: 187 FHQVRGTVAHGQKRGRKLGFPTANLALRDELVPLSGVYAVWVEVEGSIR-PGVANIGRNP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T      + +E+ I D+  +IYG+   V F   +R E KF   ++L   + ED   AR I
Sbjct: 246 TFGE-FEMAVEAHILDYKGKIYGEPIRVHFVQRIRSEKKFSGPDELITRIREDVGLARMI 304

Query: 309 LES 311
           L +
Sbjct: 305 LAA 307


>gi|288817664|ref|YP_003432011.1| riboflavin kinase [Hydrogenobacter thermophilus TK-6]
 gi|288787063|dbj|BAI68810.1| riboflavin kinase [Hydrogenobacter thermophilus TK-6]
 gi|308751262|gb|ADO44745.1| riboflavin biosynthesis protein RibF [Hydrogenobacter thermophilus
           TK-6]
          Length = 313

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHP 59
               ++E  +++        V +GNFDGIHLGH  ++E+  +     N    VLSF+PHP
Sbjct: 11  QCVKSLECVENIQES---TAVTVGNFDGIHLGHRFLIEKLKEEAKKRNLKTLVLSFHPHP 67

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             ++        L+    +  +LE +     +  +F  + +   A+ FI+++L + L  K
Sbjct: 68  LKVLSPKQSPCELTNLEEKLNLLEALSIDYAVFIRFDEKFSLMKADDFIREILYKRLSAK 127

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  +RFG  R G+  + ++ GEK GF  + ++  + N   IVSS+ IR  L  G +
Sbjct: 128 FLLVGYDWRFGYRREGEIELAKELGEKLGFEVMSVEPFKIN-GHIVSSTLIRRLLHSGRL 186

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A   LG  + ++  V+ G+  G ++G PTAN++ + ++ LKEGVYA+        S  
Sbjct: 187 EEAQVYLGRHYWVKRKVVKGDGRGSSIGVPTANLEGTENLCLKEGVYAVLVE----ESLL 242

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           GVAN+G  PT       +LE  I DF++ +  ++  V F  +LR E KF  +E+LK  + 
Sbjct: 243 GVANYGYRPTF-GGRRKVLEVHILDFNENLRSKKIKVEFVKFLREEKKFNSLEELKKQIK 301

Query: 300 EDEKKARKIL 309
           +D +  R +L
Sbjct: 302 QDIELTRSLL 311


>gi|88707062|ref|ZP_01104758.1| Riboflavin biosynthesis protein ribF [Congregibacter litoralis
           KT71]
 gi|88698712|gb|EAQ95835.1| Riboflavin biosynthesis protein ribF [Congregibacter litoralis
           KT71]
          Length = 317

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 6/312 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +        SL   ++  V  IG FDG+HLGH  ++ Q  +       P TV++F P 
Sbjct: 1   MELLRG---RSSLRAKIRPSVATIGAFDGVHLGHQTVISQLAEQGRKFDLPTTVVTFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  + + S    L     + + L  +G   L+  +F       SAE+F + + VE L V
Sbjct: 58  PREYLAADSAPARLQSFRERFESLAALGVDRLLCLRFNETLRQMSAEEFAENIFVEGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG DR G   +++  G++ GF T+  + +   + + VSS+ +RTAL  G 
Sbjct: 118 RALVLGDDFRFGHDREGGFSLMESIGKREGFDTLATETI-EVEGERVSSTRLRTALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A   LG  + I   V++G ++GR +G PTAN+ L    +   GV+A+          
Sbjct: 177 FATARACLGRDYEISGRVVYGRQLGRQIGSPTANIALRRRSVPLSGVFAVTVSGGGLDDA 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             +A+ G  PT+       LE  I D    +YGQR +V F    R E +++ +E LK  +
Sbjct: 237 PAIASVGVRPTVEEGLKPNLEVHILDGDHTLYGQRISVRFLHKFREEERYESVEILKAKI 296

Query: 299 GEDEKKARKILE 310
            ED + AR    
Sbjct: 297 HEDIEGARAWFA 308


>gi|228960025|ref|ZP_04121689.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799541|gb|EEM46494.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 335

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRSEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFMSEKNI 328


>gi|52080274|ref|YP_079065.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52785651|ref|YP_091480.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52003485|gb|AAU23427.1| riboflavin kinase and FAD synthase [Bacillus licheniformis ATCC
           14580]
 gi|52348153|gb|AAU40787.1| RibC [Bacillus licheniformis ATCC 14580]
          Length = 319

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 10/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  ++  A           +V++F+PH
Sbjct: 1   MKTIHISHPHDLKREDFPTSVMALGYFDGVHLGHQQVILTAKNTAAREGVKTSVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++        ++P   +  I+E +G   L    FT E A+ S E+FI + ++ +  
Sbjct: 61  PSAVLKKGREPKDLITPLQDKISIIEDLGVDFLYVVTFTPEFASLSPEEFIDQYILGF-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V  V+ G  F FGK   G     Q+  +     T       +N+ Q VSS+ IR+ L  G
Sbjct: 120 VTHVVAGFDFTFGKFGKGTMENFQEYAKGRVKSTSV--AKYSNQDQKVSSTRIRSVLGAG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  AA LLG  + ++  VIHG+K GRT+GFPTAN+ L    I+   GVYA++       
Sbjct: 178 DVEYAAELLGRPYHVKGFVIHGDKRGRTIGFPTANIGLKDTYIVPPTGVYAVKAEIGG-A 236

Query: 237 SYSGVANFGRNPTMVPN--GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT      G   +E  +FDF ++IYG    V ++  LR E KF  +++L
Sbjct: 237 VYNGVCNVGYKPTFYEKRPGQPSIEVNLFDFDRDIYGSEIKVEWYKRLRSEKKFGSVDEL 296

Query: 295 KIYMGEDEKKARKILESSYP 314
              +  D+++A +      P
Sbjct: 297 VEQISRDKEEAIRFFRERKP 316


>gi|42782897|ref|NP_980144.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus ATCC 10987]
 gi|42738824|gb|AAS42752.1| riboflavin biosynthesis protein RibC [Bacillus cereus ATCC 10987]
          Length = 323

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/320 (30%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   +   +
Sbjct: 297 EQIAKDKKTAQEYFANEKNI 316


>gi|300806902|emb|CBV36797.1| riboflavin biosynthesis protein RibF [Flavobacterium psychrophilum]
          Length = 310

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M VF++I   +      K  V  +G FDG+HLGH  I+ + +      +    VL+F+ H
Sbjct: 1   MKVFYSISDFKC----EKKTVATLGTFDGVHLGHQKIISRLLNNTQNKHLESVVLTFSQH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+++Q  S I  L+  + +  +LEK G   LI + F    +  + E F++ +LV+ L +
Sbjct: 57  PRSVLQVESNIKLLNTNAEKIALLEKKGIDNLIIHPFDASFSELTGEDFVKNILVDQLNI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFGK+RA D   L   G+KY F    I   +      +SS+ IR A+   +
Sbjct: 117 KKIIIGYDHRFGKNRASDIHDLIYFGKKYHFDVEQISA-KEIDEISISSTKIRKAIQDAN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           +  A   LGY +    +VI G+++GRT+GFPTAN+ +     I+ K GVY +    Q + 
Sbjct: 176 IKLANQYLGYNYLFAGNVIRGQQLGRTIGFPTANISIENTQKIIPKNGVYIVEGSWQGKN 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + G+ N G  PT+       +E   F+ ++++Y    T+S  +++R E+KF  IE+LK 
Sbjct: 236 -HQGMMNIGTKPTV-DGKNTTIEVHFFNLNEDLYNLEITISVCEFIRAEVKFNSIEELKR 293

Query: 297 YMGEDEKKARKIL 309
            + +D+  +    
Sbjct: 294 QLQQDKIISLDYF 306


>gi|299534736|ref|ZP_07048066.1| riboflavin biosynthesis protein ribC [Lysinibacillus fusiformis
           ZC1]
 gi|298729824|gb|EFI70369.1| riboflavin biosynthesis protein ribC [Lysinibacillus fusiformis
           ZC1]
          Length = 315

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 13/317 (4%)

Query: 1   MHVFHNIEINQSLP--NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M V H ++    L     ++   +A+G FDG+H GH  +++ A +  N    P  V++F+
Sbjct: 1   MEVIH-LKYPHQLQQRESMQPYSLALGFFDGVHRGHQAVIKAAKEEGNKRQIPTAVMTFD 59

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP  ++   +  +F ++    + ++ E+ G   +    FT + A  S   FI    +  
Sbjct: 60  PHPSLVLGGRNEKVFYITLLQQKLQLFEEQGVDTVFVVHFTSDFAKLSPAAFIDT-FIRG 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L ++ V  G  + FG    G    ++      G + V I E + +  + +SS+ IR  L 
Sbjct: 119 LNIQHVTAGFDYSFGAFGKGTMEDMRLLS--NGDYGVTIVEKKTDDVEKISSTRIRKLLQ 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD 234
           +G +  A  LLG  F I   V+HG+K GRT+GFPTAN+Q L    +   GVYA+R   Q+
Sbjct: 177 EGDMEEATVLLGRPFEINGIVVHGDKRGRTIGFPTANVQALEGTFIPASGVYAVRLLVQN 236

Query: 235 QTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              Y GV N G  PT     +  L +E  I +F + IYG+   V+++  +R E KF  IE
Sbjct: 237 N-WYDGVCNVGYKPTFKDPNDKQLSIEVHILNFDKNIYGEEVHVAWYKRIRSERKFDGIE 295

Query: 293 KLKIYMGEDEKKARKIL 309
            LK  + +D+++A +  
Sbjct: 296 ALKTQIEKDKQEAIRYF 312


>gi|194364902|ref|YP_002027512.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Stenotrophomonas maltophilia R551-3]
 gi|194347706|gb|ACF50829.1| riboflavin biosynthesis protein RibF [Stenotrophomonas maltophilia
           R551-3]
          Length = 315

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 159/312 (50%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHP 59
            +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+  A    +  ++  F P P
Sbjct: 3   RLFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+    + +IL ++G  A+   +F    A   AE F++++LV  L  +
Sbjct: 60  REFFAQGTPPPRLTLARSKVEILRELGVDAIGLLRFDAAMAAMPAETFVRQLLVNRLSAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L  G  
Sbjct: 120 EVWIGPEFCFGNRRRGDLALLQKLGAELGFSAGEIEAV-DLHGERISSTRIRQLLQDGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          + 
Sbjct: 179 ARAGDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M 
Sbjct: 238 SVSSFGTRPTVDGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR IL  
Sbjct: 297 RDAEQARAILSE 308


>gi|118467591|ref|YP_886990.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium smegmatis str. MC2 155]
 gi|118168878|gb|ABK69774.1| riboflavin biosynthesis protein RibF [Mycobacterium smegmatis str.
           MC2 155]
          Length = 325

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 20/328 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A   P+ +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELINHAVKAGRARGVPVVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    L+  + + +++E++G    +   FT +    + E++I ++LVE L V
Sbjct: 58  PMEVVFPGNHPAQLTTLTRRAELVEELGIDVFLVMPFTSDFMKLTPERYIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+  +L+K GE++GF       + E   N++   SS+ IR  + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVDMLRKAGERFGFAVEAMSLVAEHHRNETVTFSSTYIRACVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ AA  LG    +E  V+ G+  GR LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAAEALGRPHRVEGVVVRGDGRGRVLGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
           Q            Y    + G NPT        +E+F+ D   ++YGQ   V F   +R 
Sbjct: 238 QGPQVGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTFADLYGQHVAVDFVSRIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESS 312
           + KF  ++ L + M  D ++AR IL  S
Sbjct: 297 QEKFDSVDDLVVAMERDVERARTILRDS 324


>gi|206978183|ref|ZP_03239064.1| riboflavin biosynthesis protein RibF [Bacillus cereus H3081.97]
 gi|217961229|ref|YP_002339797.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus AH187]
 gi|222097253|ref|YP_002531310.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Bacillus
           cereus Q1]
 gi|206743600|gb|EDZ55026.1| riboflavin biosynthesis protein RibF [Bacillus cereus H3081.97]
 gi|217063304|gb|ACJ77554.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH187]
 gi|221241311|gb|ACM14021.1| riboflavin biosynthesis protein RibC [Bacillus cereus Q1]
          Length = 323

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 15/329 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPLSERDRIICF 324
             + +D+K A++   +       + I+ F
Sbjct: 297 EQIAKDKKTAQEYFANE------NNILAF 319


>gi|126662584|ref|ZP_01733583.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteria bacterium BAL38]
 gi|126625963|gb|EAZ96652.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteria bacterium BAL38]
          Length = 310

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 108/315 (34%), Positives = 165/315 (52%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +H+I   ++     K  ++ +G FDG+HLGH  IL++  K          VL+F PH
Sbjct: 1   MKTYHSIFDFKT----SKKTILTLGTFDGVHLGHKSILDKLKKGTEKGHYESVVLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++   S I  L+    +  +LE  G   LI + F    +N +AE F++ +LV+ L +
Sbjct: 57  PRMVLNQDSSIKLLNTIDEKTILLENFGIDTLIIHPFDAAFSNLTAEDFVKDILVDQLNI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G   RFGK+R  D   L   GEKYGF    I   +      +SS+ IR AL  G 
Sbjct: 117 QKIIIGYDHRFGKNRTADINDLIAFGEKYGFEVAQIGA-KEIDEIAISSTKIRKALLGGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           +      LGY + I   V+ G+KIGRT+GFPTAN++LS    +L K GVY +  +  D  
Sbjct: 176 IKLTNQYLGYSYFISGKVVEGKKIGRTIGFPTANIELSETYKLLPKNGVYIVSSKINDTL 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N G NPT+  N    +E   F+ +Q+IY     +S   ++R E KF  I++LK 
Sbjct: 236 FY-GMMNIGNNPTIGDN-EQSIEVHFFELNQDIYNHNLQISILKHIREEQKFNSIDELKS 293

Query: 297 YMGEDEKKARKILES 311
            +  D+  +   +++
Sbjct: 294 QLENDKALSIAFIKT 308


>gi|254282210|ref|ZP_04957178.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           NOR51-B]
 gi|219678413|gb|EED34762.1| riboflavin biosynthesis protein RibF [gamma proteobacterium
           NOR51-B]
          Length = 318

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 6/315 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +   +    +L    +G    +G FDG+HLGH  +LE     A       TV+ F P 
Sbjct: 1   MEIIRGL---HNLRPRHRGCAATVGAFDGVHLGHRAVLEHLKSEAARLGVASTVIFFEPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q       L     +   L  +G    +  +F     N SA+ FI+ V    LE 
Sbjct: 58  PREYFQPLEAPARLMNFREKCVALRDVGIDQALCLRFDERVRNMSADGFIEAVFSRGLEA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFGK R GD   + +R ++YG+       L     + VSS+ IR AL +G 
Sbjct: 118 QYIAIGDDFRFGKSREGDLRYMAERAQEYGYEVRSTSTL-ARSGERVSSTRIRAALAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG RF +   V+HG+++GR LGFPTAN+ L       +GV+ +    +   S 
Sbjct: 177 FQLAAELLGRRFVMGGRVLHGKQLGRQLGFPTANIALHRLRAPVQGVFVVSVTGEGLDSV 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             +AN G  PT+  +    LE  + D  +++YG+R TV+F   LR E KF+ IE L+  +
Sbjct: 237 PALANVGVRPTVEDSIRANLEVHLIDVDEDLYGRRLTVNFLHKLRDENKFEGIEALRAAI 296

Query: 299 GEDEKKARKILESSY 313
             D ++AR+ L + +
Sbjct: 297 SNDLEQARQWLATYH 311


>gi|21242007|ref|NP_641589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21107405|gb|AAM36125.1| riboflavin biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 340

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++P   L+    + + L   G  ++   +F    +   AE F++  LV  L  +
Sbjct: 60  REFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMRAEDFVRLALVARLRAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  R+GD G+L+  GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRSGDIGLLRTLGEQHGFVAGEIAPVHLH-GERISATRIRELLGAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +  + 
Sbjct: 179 ARAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAERPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR++L +
Sbjct: 297 RDAEQAREVLAA 308


>gi|152965432|ref|YP_001361216.1| riboflavin biosynthesis protein RibF [Kineococcus radiotolerans
           SRS30216]
 gi|151359949|gb|ABS02952.1| riboflavin biosynthesis protein RibF [Kineococcus radiotolerans
           SRS30216]
          Length = 325

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 18/323 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +  +     +       VV IGNFDG+H GH  +L + + +A    +    ++F+PH
Sbjct: 1   MQRWDGL---SDVGPGFGPSVVTIGNFDGVHRGHAAVLGEVVGLARGRGLRSVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        L+    +  ++   G  A++   FT E A +S E+F++ V V  L  
Sbjct: 58  PLQVLDPERAPGLLTGLDRRLDLVAATGLDAVLVLPFTRELAGWSPERFVEDVFVGALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ----IVSSSNIRTAL 174
             V+ G   RFG   +GD   +Q  GE++GF  V +++L +  ++      SS+ +R AL
Sbjct: 118 AVVVVGHDVRFGAGNSGDLTTMQGLGERFGFEVVVLEDLGDPGNRAGSPRWSSTAVRAAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRT 232
            +G V  AA +LG+   I S V+HG+  GR LG+PTAN+       ++  +GVYA     
Sbjct: 178 AEGDVARAAAVLGHPHRITSTVVHGDHRGRELGYPTANLDTDRADGLVPADGVYAGWLTR 237

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIF------DFSQEIYGQRCTVSFFDYLRPEI 286
                 +   + G NPT        +E++            ++YG+R  +     LRP +
Sbjct: 238 PSGQRLAAAVSIGTNPTF-DGLHRQVEAYCLPQPGLEQRGLDLYGERVDLDLVARLRPTL 296

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
           +F  +E L   M  D    R+IL
Sbjct: 297 RFDGVEALVEQMERDVAACRRIL 319


>gi|300780972|ref|ZP_07090826.1| riboflavin biosynthesis protein RibF [Corynebacterium genitalium
           ATCC 33030]
 gi|300532679|gb|EFK53740.1| riboflavin biosynthesis protein RibF [Corynebacterium genitalium
           ATCC 33030]
          Length = 330

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 151/314 (48%), Gaps = 16/314 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           + +P  LK  VV IG FDG+H GH +++ +A++ A     P  V++F+PHP  +      
Sbjct: 19  EDIPADLKDPVVTIGVFDGVHRGHQMLINRAVEHAQAAGVPSVVMTFDPHPVAVFAPDQT 78

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L P + + +++  +G   ++   FT E A  S E++ + V+V  L    V+ G  F 
Sbjct: 79  PPVLLPLAERARLIADLGVDYMLVIDFTRELAGESPEEYFESVIVNKLHASRVVVGENFT 138

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    +   GEKY      +  L +  ++ + S++IR+AL  G V  AA  LG 
Sbjct: 139 FGAGASGTAQTMLALGEKYRVDVDVVSLLFDGSAR-ICSTSIRSALRDGDVAGAAEFLGR 197

Query: 189 RFTIESDVIHGEKI-GRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ----------T 236
            F+I + V  G    GR LG+PTAN  ++    +  +GVYA  F   D            
Sbjct: 198 EFSITAPVERGAGRGGRELGYPTANQYVADTGAVPGDGVYAGWFTVLDSSPLDGDMEPGI 257

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+   + G NPT   +    +ESF+ D   ++Y +   V F   +R  +KF  +++L  
Sbjct: 258 RYAAAISVGTNPTFGDD-RRSVESFVLDRDADLYDRLARVEFIAKVRDMVKFDSVDELLE 316

Query: 297 YMGEDEKKARKILE 310
            M  D  + R IL 
Sbjct: 317 NMARDVARVRDILS 330


>gi|16803369|ref|NP_464854.1| hypothetical protein lmo1329 [Listeria monocytogenes EGD-e]
 gi|224501728|ref|ZP_03670035.1| hypothetical protein LmonFR_04297 [Listeria monocytogenes FSL
           R2-561]
 gi|255026685|ref|ZP_05298671.1| hypothetical protein LmonocytFSL_10695 [Listeria monocytogenes FSL
           J2-003]
 gi|16410745|emb|CAC99407.1| ribC [Listeria monocytogenes EGD-e]
          Length = 314

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/295 (34%), Positives = 167/295 (56%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +I         VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + + K+G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMAKLGVDIMYVVRFTTQFSELSPQAFVDNYLV-ALHVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L K  +   F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TDLAKYADGR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAK 311


>gi|86134827|ref|ZP_01053409.1| riboflavin biosynthesis protein RibF [Polaribacter sp. MED152]
 gi|85821690|gb|EAQ42837.1| riboflavin biosynthesis protein RibF [Polaribacter sp. MED152]
          Length = 310

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F       S     +   V IG FDG+H GH  I+E+ +           +L+F PH
Sbjct: 1   MKIFQKTSSFSS----EEKTFVTIGTFDGVHFGHQKIIEKLVSEAKKEQKKSVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  + I  ++  + +  +LEK G   LI + F+   +  +A +F++ +LV  L +
Sbjct: 57  PRMVLQKDASIELINTINERANLLEKTGLDYLIIHPFSRAFSRTTALEFVRNILVNQLNI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G    FGK+R G+   L +    Y F    I   ++     VSS+ IR AL +G+
Sbjct: 117 SKLIIGYDHHFGKNREGNITQLTEYSHLYDFKVEEIPA-QDIDDVSVSSTKIRRALHEGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQT 236
           +  A H LGY F +  +V++G+K+G  +G+PTAN+ +  D  ++ K GVY ++    D+ 
Sbjct: 176 LKTANHYLGYNFMLNGNVVNGKKLGGKIGYPTANIDIKEDYKLIPKTGVYVVKSTI-DKE 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G+ N G  PT+  N    +E   FDF++++Y Q  T+    +LR E KF+ ++ L  
Sbjct: 235 EVFGMMNIGNRPTVNGNHQ-TIEVHFFDFNKDLYHQNLTIELLYFLRDEQKFESLDLLIH 293

Query: 297 YMGEDEKKARKILESS 312
            + +DE  AR  ++++
Sbjct: 294 QLKKDEHIARDYIKNN 309


>gi|311693402|gb|ADP96275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [marine
           bacterium HP15]
          Length = 323

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 153/326 (46%), Gaps = 10/326 (3%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVL 53
           M +   +   + L          G V  IGNFDG+HLGH  I++Q    A     P  V+
Sbjct: 1   MRLIRGLTNLKMLSRREDSPLANGCVATIGNFDGVHLGHKTIIDQVKSKAKALGVPSVVM 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            F P PR   Q       L     + + L   G   ++  +F     +YSA  FI  VL+
Sbjct: 61  IFEPQPREFFQGREAPPRLMGFRQKFEALLAEGIDIVLCLRFNQAFRSYSAMGFIDDVLI 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L V+ ++ G  FRFG DRAGD  +L+K G   GF       +  +  + VSS+ +R  
Sbjct: 121 HGLAVRHLVVGDDFRFGCDRAGDFALLEKVGYDAGFSVENTLTVTVD-GERVSSTRVRDL 179

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           LT   +  A  LLG+ + I   V++G ++GR +G PTAN+ L     L+ GVY +     
Sbjct: 180 LTVNGLEKAESLLGHPYRIRGRVVYGRQLGRQIGAPTANILLHRTPALR-GVYVVAATLD 238

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D   + GVAN G  PT+       LE  +FDF+  +YGQ   V F   LR E KF  +++
Sbjct: 239 DGARFDGVANIGVRPTV-DGKRPSLEVHLFDFAGTLYGQHLEVVFRHGLRDEEKFGSVDE 297

Query: 294 LKIYMGEDEKKARKILESSYPLSERD 319
           LK  +  D   AR  +  +  +   D
Sbjct: 298 LKDQIARDFDHARAWIAENGSVKSAD 323


>gi|312111631|ref|YP_003989947.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y4.1MC1]
 gi|311216732|gb|ADP75336.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y4.1MC1]
          Length = 327

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M        +Q     L   V+A+G FDGIHLGH  ++  A++I         V++F+PH
Sbjct: 1   MKTLFISHPHQMKKEELPPTVMALGYFDGIHLGHQKVIRTAVQIAAEKGYKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +    +  ++P   +E+++ ++G   L   +FT   A    ++F+ + ++  L 
Sbjct: 61  PSVVLGKKDKHVHLITPLKKKEQLIGELGIDYLYIVEFTSSFAQLFPQEFVDQYII-GLH 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F +G+   G    L     +    TV      +   + +SS+ +R  L  G
Sbjct: 120 VKHVVAGFDFTYGRLGKGTMETLPFHSREQFTQTVI--PKLSIDGEKISSTYVRQLLKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            V     LLG  + +E  V+ GE+ GRT+GFPTAN+ L  D +L   GVYA++ +     
Sbjct: 178 DVDQLPRLLGRFYEVEGTVVGGERRGRTIGFPTANIALKDDYLLPALGVYAVKVKI-GSD 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            + GV N G  PT          +E  IFDF+++IYG+  T+ +   LR E KF  +++L
Sbjct: 237 IFEGVCNVGYKPTFYSTREGLPSIEVHIFDFAKDIYGETMTIEWHMRLRSEQKFAGVDEL 296

Query: 295 KIYMGEDEKKARKILES 311
              +  D++KA+    +
Sbjct: 297 IAQIQRDKEKAQAYFRN 313


>gi|118465455|ref|YP_882855.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium avium 104]
 gi|118166742|gb|ABK67639.1| riboflavin biosynthesis protein RibF [Mycobacterium avium 104]
          Length = 307

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 17/306 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FDG+H GH  ++  A+K   A N P  +++F+PHP  ++   S    L+  + + 
Sbjct: 2   LTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPHPMEVVYPGSHPAQLTTLTRRA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++E++G    +   FT +    + ++++ ++LVE L V  V+ G  F FGK   G+   
Sbjct: 62  ELVEELGIDVFLVMPFTTDFMKLTPDRYVHELLVENLHVVEVVVGENFTFGKKATGNVET 121

Query: 140 LQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           L++ GE++GF    +    E  +N++   SS+ IR+ +  G V+ A   LG    +E  V
Sbjct: 122 LRRAGERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVDAGDVVAAMEALGRPHRVEGVV 181

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ----------TSYSGVANFG 245
           + GE  G  LGFPTAN+       +  +GVYA  F                 Y    + G
Sbjct: 182 VRGEGRGIQLGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVTGTVIPGERYQAAVSVG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            NPT        +E+F+ D   ++YGQ   + F   +R + KF  ++ L + MG+D ++A
Sbjct: 242 TNPTF-SGRTRTVEAFVLDTQADLYGQHVALDFVARIRGQHKFDSVDDLVVAMGQDTERA 300

Query: 306 RKILES 311
           R++L +
Sbjct: 301 RQLLSA 306


>gi|325286674|ref|YP_004262464.1| riboflavin biosynthesis protein RibF [Cellulophaga lytica DSM 7489]
 gi|324322128|gb|ADY29593.1| riboflavin biosynthesis protein RibF [Cellulophaga lytica DSM 7489]
          Length = 309

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/301 (33%), Positives = 161/301 (53%), Gaps = 7/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTL 72
           +     V+ IG FDG+H+GH  ILE+ I  A       TVL+F PHPR ++Q  S I  L
Sbjct: 11  DKAHATVITIGTFDGVHIGHKKILERLINSAKLLEIESTVLTFFPHPRMVLQQDSNIKLL 70

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +E IL  +G   LI + F+ E +  SA +F++ +LV  L  K +I G   RFG++
Sbjct: 71  NTIEEKEMILSNLGLDFLIIHPFSKEFSRLSAIEFVRDILVNKLNTKKIIIGYDHRFGRN 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R  D   L+  G  + F+   I     +    VSS+ IR AL +G V  A   LGY + +
Sbjct: 131 RNADINDLKNYGTTFDFNVEEITAQEIDD-VSVSSTKIRKALAEGDVSKANSYLGYNYML 189

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
              V  G+ +GR L FPTAN+ +  +  ++ K GVY ++ +  + T + G+ N G NPT+
Sbjct: 190 TGIVTKGKGLGRQLNFPTANIYIKEEYKLIPKNGVYVVKAKLNNSTVF-GMMNIGYNPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E   F+F+ ++YG++  V   + +R E+KF  I  LK+ + +D++ A  ++ 
Sbjct: 249 N-GTEKTIEVNFFNFNDDLYGKKIQVDILERIRDEVKFDSINDLKVQLTKDQETATSLIA 307

Query: 311 S 311
            
Sbjct: 308 K 308


>gi|254247427|ref|ZP_04940748.1| FAD synthase [Burkholderia cenocepacia PC184]
 gi|124872203|gb|EAY63919.1| FAD synthase [Burkholderia cenocepacia PC184]
          Length = 330

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/333 (29%), Positives = 152/333 (45%), Gaps = 16/333 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ S + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQSPQAFVERTLVNGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE +GF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGELHGFEVEQMGTVAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ +        G++ ++         
Sbjct: 177 LDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIQHKRPALAGIFVVQVHGLGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAI 296

Query: 299 GEDEKKARKIL----------ESSYPLSERDRI 321
             D   AR              + +  S  DRI
Sbjct: 297 ALDVANARAYFTERDHAPGSRATGFATSATDRI 329


>gi|258541832|ref|YP_003187265.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01]
 gi|256632910|dbj|BAH98885.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01]
 gi|256635967|dbj|BAI01936.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-03]
 gi|256639022|dbj|BAI04984.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-07]
 gi|256642076|dbj|BAI08031.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-22]
 gi|256645131|dbj|BAI11079.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-26]
 gi|256648186|dbj|BAI14127.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-32]
 gi|256651239|dbj|BAI17173.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654230|dbj|BAI20157.1| riboflavin kinase RibF [Acetobacter pasteurianus IFO 3283-12]
          Length = 315

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/285 (34%), Positives = 146/285 (51%), Gaps = 1/285 (0%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + +P    G   A+GNFDG+HLGH  ++        + P+ V++F PHPR + +   P F
Sbjct: 11  RDIPPEAHGCAAALGNFDGVHLGHAHLVHSTHAARPDLPLAVVTFEPHPRELFRPQDPPF 70

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS P  +   L+ +G   + +  F  E +  +AE+F++ VL + L ++ V  G  F FG
Sbjct: 71  RLSLPDERFAALQALGVQHVFQIGFDEEFSRMTAERFVEDVLHDALCLRHVACGPDFAFG 130

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R GD   L +R  + G     +  L +      SS+ IR  L +G+   A   LG  +
Sbjct: 131 YRRGGDVTFLAERTGELGMGFTSVPALADAAGPY-SSTRIRRLLQEGYPERATEELGRPW 189

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V HG+K GR LGFPTAN+ L   +    GVYA+  R     +  GVAN GR PT+
Sbjct: 190 FIRGQVQHGDKRGRLLGFPTANIPLGRHLEPARGVYAVTVRLPGGYTRPGVANIGRRPTI 249

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                  +E  +FDF  ++YGQ  +V+    LR E +F  +++LK
Sbjct: 250 NDGQESRVEVNLFDFDGDLYGQTLSVALHKMLRAEQRFAGLDELK 294


>gi|324327703|gb|ADY22963.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 323

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 15/329 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 178 EMEQIPSILGRAYTVAGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHD-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPLSERDRIICF 324
             + +D+K A++   +       + I+ F
Sbjct: 297 EQIAKDKKTAQEYFANE------NNILAF 319


>gi|257094114|ref|YP_003167755.1| riboflavin biosynthesis protein RibF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046638|gb|ACV35826.1| riboflavin biosynthesis protein RibF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 307

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V+                V+ IGNFDG+HLGH  +L +    A  + +   VL+F PH
Sbjct: 1   MLVYRGFAQTAP-----SATVLTIGNFDGVHLGHRALLARLTAAAAKAGLPAAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      SP   LS    + +++   G        F    A ++ E+FI++VLV  L V
Sbjct: 56  PREFFAPHSPPSRLSTLREKLELIADDGVDLAYVCHFNARFAAFAPEEFIERVLVGALRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  FRFG  RAG+  +L++ G   GF    ++ +  N  +  SSS +R AL +G 
Sbjct: 116 RHLIVGDDFRFGARRAGNFALLREAGAHLGFQVEAMESVTLNGERA-SSSAVRDALQEGR 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA LLG  ++I+  V+HG+KIGR LGF TAN+++  +    +GV+A+  +      +
Sbjct: 175 LEHAARLLGRPYSIDGRVVHGDKIGRQLGFATANIRIKHERPPLQGVFAVEVKGLPGGPH 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G AN G  P+       LLE  +FDFS +IYG    V F   LR E+KF D   LK  +
Sbjct: 235 RGAANLGYRPSANQVVRPLLEVHLFDFSADIYGAHLNVRFLHKLRDEVKFPDFNALKAQI 294

Query: 299 GEDEKKARKILE 310
             D + A+   +
Sbjct: 295 ASDVEAAKAYFQ 306


>gi|229098278|ref|ZP_04229225.1| FMN adenylyltransferase [Bacillus cereus Rock3-29]
 gi|228685176|gb|EEL39107.1| FMN adenylyltransferase [Bacillus cereus Rock3-29]
          Length = 335

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             I+ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVILGKKEAHVEYITPMRDKEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFASEKNI 328


>gi|85709709|ref|ZP_01040774.1| riboflavin biosynthesis protein [Erythrobacter sp. NAP1]
 gi|85688419|gb|EAQ28423.1| riboflavin biosynthesis protein [Erythrobacter sp. NAP1]
          Length = 308

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 5/308 (1%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
             ++  + +   L+G V+A+GNFDG H GH  +  +AI+ A+    P  + +F+PHP   
Sbjct: 2   RWLDHREQVTQALRGAVIALGNFDGFHRGHQAVAGEAIRWAHEEGRPSIIATFDPHPVRF 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +   P F L+    ++++    G +A++ + F  E A   AE FI  +L+E      V+
Sbjct: 62  FRPDVPPFRLTTLEQRQELYLAAGATAMLVFHFDGELAGTPAEDFITDILIERFGAYGVV 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
           TG  F FGK   G+  +L+  G + G  +  ++ +      +VSSS +R AL +G    A
Sbjct: 122 TGGDFTFGKGAKGNVDLLRDFGSQKGLKSRVVEAV-EGHGDVVSSSRVREALREGKPELA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGV 241
           A LL   F I   V HG+K GR LG+PTAN+ +   +  K GVYA+  +         G 
Sbjct: 181 AELLTRPFAIRGIVEHGDKNGRKLGYPTANLAIDTYLRPKYGVYAVTGKILATGQELKGA 240

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           AN G  P   P    LLE + FDFS ++YGQ   V+F  +LR E +F  ++ L + M  D
Sbjct: 241 ANIGIRPQFEPPKE-LLEPYFFDFSGDLYGQEIEVAFHHFLRGEARFDSLDDLMVQMERD 299

Query: 302 EKKARKIL 309
             +AR++L
Sbjct: 300 CDRARELL 307


>gi|298491900|ref|YP_003722077.1| riboflavin biosynthesis protein RibF ['Nostoc azollae' 0708]
 gi|298233818|gb|ADI64954.1| riboflavin biosynthesis protein RibF ['Nostoc azollae' 0708]
          Length = 356

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/357 (28%), Positives = 152/357 (42%), Gaps = 54/357 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI------------------------ 42
           + +  S    L    VA+G FDG+H+GH  +++  +                        
Sbjct: 1   MLVTSSTEGILTPTAVALGKFDGVHIGHQRVIQPILPSAQDQERRGNGENLAEKSTLPTG 60

Query: 43  ------KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFT 96
                         TV++F+PHP        P   L+P   + + L  +G   L+   F 
Sbjct: 61  NLTPLESQKKRIHSTVVTFDPHPHEFFTG-QPRTLLTPLDEKVEQLRSLGVEQLVLLPFD 119

Query: 97  LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156
            E +  S + F+ K+LV+ L+ + +  G  F FGK R G    LQ    K+      +  
Sbjct: 120 KELSALSPQDFVAKILVQQLQCQQISVGEDFCFGKKRTGTAKDLQTLAAKFNIPVTIVPI 179

Query: 157 LRNNKS---------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
             +                    +S+S IR +L  G +  A  LLG  +T+   VI G+K
Sbjct: 180 QTDIDELSTKSSDINTTLTENNRISTSLIRQSLEAGDIEKANRLLGRPYTLTGVVIPGQK 239

Query: 202 IGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS------YSGVANFGRNPTMVPNG 254
           +GRT+GFPTAN+QL  D  L  +GVYA+R     Q          GV N G  PT+    
Sbjct: 240 LGRTIGFPTANLQLPKDKFLPHQGVYAVRVVIHSQNPEVSANENLGVMNIGNRPTVN-GT 298

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E  +FD+  ++Y +   V    +LRPE KF  +E LK  +  D   AR+IL S
Sbjct: 299 HFAVEVHLFDWPDDLYSKELVVQLVKFLRPEQKFPSLEALKTQIQLDCTVAREILAS 355


>gi|116620958|ref|YP_823114.1| FMN adenylyltransferase/riboflavin kinase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224120|gb|ABJ82829.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 322

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 7/326 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPH 58
           M V+ ++     +P       V IGNFDG+H GH  IL +  AI   +    TVL+F+PH
Sbjct: 1   MQVYRSL---AEIPRDFGPSAVTIGNFDGVHFGHRQILRRVKAIADEHGWKATVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        L+ P  +  ++ + G   ++   FT E A    E+F++++LVE +  
Sbjct: 58  PTRIVAPDRTPPLLTSPEARATLMAEEGIENVLILPFTPELALLMPEEFVRRLLVEAMGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AG+  +L   G++ GF T  +  +   + ++VSSS IR  +  G+
Sbjct: 118 RAVLVGDNFRFGHKAAGNVAVLADLGKRMGFTTEVVPAISC-RGRMVSSSGIREMIRAGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
           V  AA  L + + +E  V+ G  +G     PT N+    +++   GVY    R  D    
Sbjct: 177 VSLAARFLLHPYGMEGQVVSGRGVGSKQTVPTLNLATPAEVIPASGVYITYTRDLDAARE 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + N G  PT   +  L +E+F+ D  +     R  V F   +R E KF   E L+  
Sbjct: 237 WRSITNVGYRPTFGASDQLTIETFLLDALEGETPARIRVEFLRRVREERKFDTPESLRAQ 296

Query: 298 MGEDEKKARKILESSYPLSERDRIIC 323
           + +D + A+         + R+ I C
Sbjct: 297 ILKDVRTAQNYFRRVKAWTGRECISC 322


>gi|289643640|ref|ZP_06475753.1| riboflavin biosynthesis protein RibF [Frankia symbiont of Datisca
           glomerata]
 gi|289506531|gb|EFD27517.1| riboflavin biosynthesis protein RibF [Frankia symbiont of Datisca
           glomerata]
          Length = 308

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/307 (31%), Positives = 158/307 (51%), Gaps = 6/307 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSP 68
           ++ P+   GGVV IG FDG+H GH  I+ +A++    +  P+ VL+F+PHP  +I   S 
Sbjct: 2   RNTPDDWPGGVVTIGFFDGVHRGHQQIITRAVERGRQAGEPVLVLTFDPHPAEVISPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+ P  + ++L ++G  A+  + FT E +  SA  F+  +L   L    V+ G  F 
Sbjct: 62  PPLLTTPDFKIELLGRLGVDAVCVHSFTPEFSLVSAADFVHDMLRPRLRPSVVVVGENFT 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G    G+   L++ GE  GF    +  +R +   ++SS++IR  + +G V  AA  LG 
Sbjct: 122 YGHRAEGNLESLRRAGETEGFAVEGVRLVREDD-HVLSSTHIRARIAEGDVATAARALGR 180

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              IE  V+HG+  GRT+G+PTAN+  +    +  +GVYA  +  +         + G N
Sbjct: 181 DHRIEGIVVHGDARGRTIGYPTANLLTTRYAAIPADGVYAG-YVLRAAERCPAAISIGTN 239

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT        +E+++ DF  ++YG +    F + LRP ++F  +  L   M  D    RK
Sbjct: 240 PTF-DGADRRVEAYLLDFEGDLYGAQLAFEFTERLRPTLRFDSVGDLITQMAADVTATRK 298

Query: 308 ILESSYP 314
           I  ++ P
Sbjct: 299 ITAAAGP 305


>gi|30263813|ref|NP_846190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Ames]
 gi|47529236|ref|YP_020585.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49186659|ref|YP_029911.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Sterne]
 gi|49478388|ref|YP_037870.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|52141680|ref|YP_085150.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           cereus E33L]
 gi|165872636|ref|ZP_02217267.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0488]
 gi|167635826|ref|ZP_02394135.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0442]
 gi|167639764|ref|ZP_02398033.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0193]
 gi|170687835|ref|ZP_02879049.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0465]
 gi|170706835|ref|ZP_02897293.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0389]
 gi|177652134|ref|ZP_02934680.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0174]
 gi|190568428|ref|ZP_03021335.1| riboflavin biosynthesis protein RibF [Bacillus anthracis
           Tsiankovskii-I]
 gi|196044435|ref|ZP_03111670.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB108]
 gi|218904936|ref|YP_002452770.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH820]
 gi|227813283|ref|YP_002813292.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. CDC
           684]
 gi|229604157|ref|YP_002868047.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0248]
 gi|254683484|ref|ZP_05147344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722005|ref|ZP_05183794.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. A1055]
 gi|254735847|ref|ZP_05193553.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Western North America USA6153]
 gi|254739627|ref|ZP_05197321.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Kruger B]
 gi|254756000|ref|ZP_05208031.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Vollum]
 gi|254759339|ref|ZP_05211364.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           anthracis str. Australia 94]
 gi|30258457|gb|AAP27676.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. Ames]
 gi|47504384|gb|AAT33060.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180586|gb|AAT55962.1| riboflavin biosynthesis protein RibC [Bacillus anthracis str.
           Sterne]
 gi|49329944|gb|AAT60590.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975149|gb|AAU16699.1| riboflavin biosynthesis protein C [Bacillus cereus E33L]
 gi|164711668|gb|EDR17214.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0488]
 gi|167512165|gb|EDR87542.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0193]
 gi|167528783|gb|EDR91541.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0442]
 gi|170128253|gb|EDS97122.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0389]
 gi|170668151|gb|EDT18900.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0465]
 gi|172082503|gb|EDT67568.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0174]
 gi|190560432|gb|EDV14410.1| riboflavin biosynthesis protein RibF [Bacillus anthracis
           Tsiankovskii-I]
 gi|196024470|gb|EDX63142.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB108]
 gi|218539990|gb|ACK92388.1| riboflavin biosynthesis protein RibF [Bacillus cereus AH820]
 gi|227002763|gb|ACP12506.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str. CDC
           684]
 gi|229268565|gb|ACQ50202.1| riboflavin biosynthesis protein RibF [Bacillus anthracis str.
           A0248]
          Length = 323

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 158/320 (49%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 178 EMEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   +   +
Sbjct: 297 EQIAKDKKTAQEYFANEKNI 316


>gi|53718548|ref|YP_107534.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei K96243]
 gi|53726230|ref|YP_103805.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei ATCC 23344]
 gi|121601307|ref|YP_993954.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei SAVP1]
 gi|124383434|ref|YP_001027019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei NCTC 10229]
 gi|126449156|ref|YP_001081642.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia mallei NCTC 10247]
 gi|126452288|ref|YP_001065253.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|167718455|ref|ZP_02401691.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei DM98]
 gi|167737505|ref|ZP_02410279.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 14]
 gi|167814623|ref|ZP_02446303.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 91]
 gi|167823093|ref|ZP_02454564.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 9]
 gi|167844654|ref|ZP_02470162.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei B7210]
 gi|167893186|ref|ZP_02480588.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 7894]
 gi|167909888|ref|ZP_02496979.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 112]
 gi|167917911|ref|ZP_02505002.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei BCC215]
 gi|242316168|ref|ZP_04815184.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106b]
 gi|52208962|emb|CAH34901.1| putative riboflavin biosynthesis protein [Burkholderia pseudomallei
           K96243]
 gi|52429653|gb|AAU50246.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           23344]
 gi|121230117|gb|ABM52635.1| riboflavin biosynthesis protein RibF [Burkholderia mallei SAVP1]
 gi|124291454|gb|ABN00723.1| riboflavin biosynthesis protein RibF [Burkholderia mallei NCTC
           10229]
 gi|126225930|gb|ABN89470.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106a]
 gi|126242026|gb|ABO05119.1| riboflavin biosynthesis protein RibF [Burkholderia mallei NCTC
           10247]
 gi|242139407|gb|EES25809.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1106b]
          Length = 330

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAI 296

Query: 299 GEDEKKARKILES 311
            +D    R     
Sbjct: 297 AQDVVDTRAYFAE 309


>gi|295399857|ref|ZP_06809838.1| riboflavin biosynthesis protein RibF [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978260|gb|EFG53857.1| riboflavin biosynthesis protein RibF [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 327

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M        +Q     L   V+A+G FDGIHLGH  ++  A++I         V++F+PH
Sbjct: 1   MKTLFISHPHQMKKEELPPTVMALGYFDGIHLGHQKVIRTAVQIAAEKGYKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +    +  ++P   +E+++ ++G   L   +FT   A    ++F+ + ++  L 
Sbjct: 61  PSVVLGKKDKHVHLITPLKKKEQLIGELGIDYLYIVEFTSSFAQLFPQEFVDQYII-GLH 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F +G+   G    L     +    TV      +   + +SS+ +R  L  G
Sbjct: 120 VKHVVAGFDFTYGRLGKGTMETLPFHSREQFTQTVI--PKLSIDGEKISSTYVRQLLKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            V     LLG  + +E  V+ GE+ GRT+GFPTAN+ L  D +L   GVYA++ +     
Sbjct: 178 DVDQLPRLLGRFYEVEGTVVGGERRGRTIGFPTANIALKDDYLLPALGVYAVKVKI-GSD 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            + GV N G  PT          +E  IFDF+++IYG+  T+ +   LR E KF  +++L
Sbjct: 237 IFEGVCNVGYKPTFHSTREGLPSIEVHIFDFAKDIYGETMTIEWHMRLRSEQKFAGVDEL 296

Query: 295 KIYMGEDEKKARKILES 311
              +  D++KA+    +
Sbjct: 297 IAQIQRDKEKAQAYFRN 313


>gi|116073394|ref|ZP_01470656.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9916]
 gi|116068699|gb|EAU74451.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9916]
          Length = 305

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 5/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P   +    +A+G+FDG+H GH  +++   +  +    TV+SF PHPR ++   + +  L
Sbjct: 7   PQQARTPSALALGSFDGLHAGHRRVIDAVCQEPHGGVPTVVSFWPHPREVLHGEARL-RL 65

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  +L+ +G   L+   F  + A  SAE+F++ +L+E L+ + +  G  FRFG+ 
Sbjct: 66  DLPEEKLSLLQPLGIEQLVLVPFDQDLARLSAEEFVRTMLLETLQARHIAVGANFRFGRG 125

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G    LQ    + G     +  L +    + SSS IR AL++G +  A  LLG  +  
Sbjct: 126 RLGTTETLQTLCRQSGAQVTVLPILEDASGAM-SSSRIRAALSEGDLAMAQQLLGRPYRF 184

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTM 250
              V+ G  +G T+G+PTAN+Q+     L   GVYA   +  D+  +   V N G  PT+
Sbjct: 185 SGTVVQGRGLGHTIGWPTANLQVDGRKFLPGLGVYAAWAQVGDEDVHLPAVMNLGPQPTV 244

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            PN P  +E  + D ++E+ GQR TV     LR + +F  +E+L   +G D + AR  L 
Sbjct: 245 DPNSPSAVEVHLLDTNRELVGQRLTVEPVQRLRGQQRFSGLEELSAQIGRDAQMARTTLR 304

Query: 311 S 311
           +
Sbjct: 305 A 305


>gi|117925438|ref|YP_866055.1| riboflavin kinase / FMN adenylyltransferase [Magnetococcus sp.
           MC-1]
 gi|117609194|gb|ABK44649.1| FMN adenylyltransferase [Magnetococcus sp. MC-1]
          Length = 307

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 8/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M++   +    +LP+  +G V+ IGNFDG+H GH  +  Q   +   + +P   ++F PH
Sbjct: 1   MYIIRGL---INLPDRFRGAVLTIGNFDGVHRGHQRLFAQLHALGQLHQAPTMAMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +++   P+  ++    + + +++ G  A+   +FT +     AE F++ +L   L +
Sbjct: 58  PRRVLRPEQPLDRITGVRGKARWMDQYGLDAMFICRFTRQLQTMPAEDFVRDLLAHGLGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG    GD   L   G++YGF      EL       VSS+ +R A+ +  
Sbjct: 118 REVVIGENFRFGSHGRGDFNTLANLGQRYGFGAHK-AELLLEGGVNVSSTGVRQAIRQAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F IE  VI G + GR LGFPTAN+ L   +    GVY +    +     
Sbjct: 177 FKAAEALLGRPFEIEGRVIAGMRRGRGLGFPTANVALYHLLYPPVGVYLVEAMVEGLWC- 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             +AN G NPT    G L +E  +     ++Y +   V F  ++R E KF D+E LK  +
Sbjct: 236 PAIANIGSNPTFGDEG-LHMEVHMLVPCSDLYHRNLRVKFHAFVRGEHKFPDVEALKAQI 294

Query: 299 GEDEKKARKIL 309
           G D   A+   
Sbjct: 295 GADVAAAKTYF 305


>gi|217976868|ref|YP_002361015.1| riboflavin biosynthesis protein RibF [Methylocella silvestris BL2]
 gi|217502244|gb|ACK49653.1| riboflavin biosynthesis protein RibF [Methylocella silvestris BL2]
          Length = 329

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 114/295 (38%), Positives = 163/295 (55%), Gaps = 12/295 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
           QS P  L+  VVAIGNFDG+HLGH  ++ +A  +A   + P  VL+F PHP    Q    
Sbjct: 17  QSPPEGLESAVVAIGNFDGVHLGHLAVIRRAEALAARLDRPCAVLTFEPHPSDFFQRGRA 76

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +F LSP   + + L+++G   +I   F    A   A  FI++VL+  L V  V+ G  F 
Sbjct: 77  VFRLSPMQAKARSLKRLGVDGMIVVPFNEALAALPAGHFIEEVLLRRLGVSAVVAGYDFH 136

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS--------QIVSSSNIRTALTKGHVL 180
           FG  R+G    L++ G + GF    +  +    +           SS+ IR AL  G   
Sbjct: 137 FGAGRSGTPAFLREAGARLGFSVEIVGRVNAEGAGSAGGDAPTPASSTAIRAALEVGDAA 196

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA LLG  ++I  +V+ G+K+GR LGFPTAN++  P   L+ G+YA+R        + G
Sbjct: 197 EAARLLGRPYSIVGEVLAGQKLGRELGFPTANIRPDPTCRLRHGIYAVRVDIGG-VLHDG 255

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           VA+FGR PT+  NG  LLE+ +FDFS ++YGQ   V F  ++RPE KF  ++ LK
Sbjct: 256 VASFGRRPTV-DNGEALLEAHVFDFSGDLYGQTLEVFFVGWIRPEEKFASLDALK 309


>gi|77461074|ref|YP_350581.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens Pf0-1]
 gi|77385077|gb|ABA76590.1| riboflavin biosynthesis protein [Pseudomonas fluorescens Pf0-1]
          Length = 318

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 98/301 (32%), Positives = 145/301 (48%), Gaps = 7/301 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  + A     P  V+ F P 
Sbjct: 7   MQLVRGL---HNLRPQHRGCVATIGNFDGVHRGHQAILARLRERALELGVPSCVVIFEPQ 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F    +  SA +F+  +LV+ L V
Sbjct: 64  PREFFAPETAPARLARLRDKLQLLAAEGVDRVLCLAFNQRLSKLSASEFVDTILVDGLGV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   L + G+ +GF       +       VSS+ +R AL    
Sbjct: 124 QHLEVGDDFRFGCDRLGDFDFLLQAGQVHGFTVEAAQTV-ELDGIRVSSTQVRNALAAAD 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  + I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  ++
Sbjct: 183 FALAERLLGRPYRIAGRVLHGQKLARQLGTPTANIQLKRRRVPFTGVYLVDVDI-DGKTW 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 242 PGVANIGVRPTVQGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEALKTAI 301

Query: 299 G 299
            
Sbjct: 302 S 302


>gi|85704413|ref|ZP_01035515.1| riboflavin biosynthesis protein RibF [Roseovarius sp. 217]
 gi|85670821|gb|EAQ25680.1| riboflavin biosynthesis protein RibF [Roseovarius sp. 217]
          Length = 312

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/307 (34%), Positives = 154/307 (50%), Gaps = 10/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +      + +  +G   AIGNFDG+H+GH  ++E A        +P+ +L+F PH
Sbjct: 1   MRIIRDYTY---VTDADRGASAAIGNFDGVHIGHRSVIELARTAGERIGAPLGILTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P F L     +   LEK+G   L    F    A  S   F + V+ + L +
Sbjct: 58  PREYFAPDAPPFRLMGREARAHRLEKLGVERLYEINFNAGLAALSPRAFAETVIRDGLGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FGK RAG+  +LQ+ G+  GF    I  L   +   VSS+ IR AL++G 
Sbjct: 118 RHVVVGADFCFGKGRAGNATMLQEFGDDMGFDVT-IATLLEGEIGQVSSTAIRAALSEGA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---Q 235
              AA +LG+   I+  VI GE+ GRTLG+PTANM +      K G+YA+     D   +
Sbjct: 177 PRAAAAMLGHWHRIDGPVIGGEQRGRTLGYPTANMSIKGLHPPKFGIYAVLVDVLDGPHK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G A+ G  P         +E+FIFDF+ ++YG   +V   +YLRPE  F  +E   
Sbjct: 237 GQYHGAASLGVRPMFQ-GEEANIETFIFDFTGDLYGANLSVGLIEYLRPEATFDSLEAFI 295

Query: 296 IYMGEDE 302
             M  D 
Sbjct: 296 AQMDADC 302


>gi|300743973|ref|ZP_07072993.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa M567]
 gi|311113223|ref|YP_003984445.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa ATCC
           17931]
 gi|300380334|gb|EFJ76897.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa M567]
 gi|310944717|gb|ADP41011.1| riboflavin biosynthesis protein RibF [Rothia dentocariosa ATCC
           17931]
          Length = 321

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 9/310 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSP 68
             +P      VV IGNFDG+H+GH  ++ + +++AN   +    +SF+PHP  +      
Sbjct: 8   SDIPADFGPSVVTIGNFDGVHIGHARVISRVVEVANEHGLVSVAVSFDPHPMQVHHPELK 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              +     +   + ++G    +   + LE A  S E+F++ V V+ L  + V+ G   R
Sbjct: 68  HQEIMGQGSRRYFMCQLGLQNYLLLHYDLEFAKQSPEEFVKSVFVDTLRARYVVIGDDVR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +GD   +++ G+KYGF  + +D+L  ++    SS+ IR  L  G +  AA LLG 
Sbjct: 128 FGHKNSGDLNTMRELGKKYGFEVIVVDDLMADEKTRCSSTRIREYLNAGDMEGAARLLGR 187

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              +  +V+HG   GR LGFPTAN++L +   +  +GVYA     +    +    + G N
Sbjct: 188 PHLMYGEVVHGLARGRELGFPTANLELEARGFIPVDGVYAGWLTDESGEKHPAAISVGTN 247

Query: 248 PTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           PT        +E+ + +  Q      ++YGQ   V F  +LRP + +  I+ L   + +D
Sbjct: 248 PTFDGIENRQVEAHVINRPQERVEDFDLYGQHVVVEFVKHLRPMVAYHGIDALIEQINQD 307

Query: 302 EKKARKILES 311
             +AR +L +
Sbjct: 308 VAQARDVLAA 317


>gi|228922563|ref|ZP_04085863.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229047495|ref|ZP_04193085.1| FMN adenylyltransferase [Bacillus cereus AH676]
 gi|229111280|ref|ZP_04240833.1| FMN adenylyltransferase [Bacillus cereus Rock1-15]
 gi|229129085|ref|ZP_04258058.1| FMN adenylyltransferase [Bacillus cereus BDRD-Cer4]
 gi|229146380|ref|ZP_04274751.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST24]
 gi|228637013|gb|EEK93472.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST24]
 gi|228654322|gb|EEL10187.1| FMN adenylyltransferase [Bacillus cereus BDRD-Cer4]
 gi|228672056|gb|EEL27347.1| FMN adenylyltransferase [Bacillus cereus Rock1-15]
 gi|228723742|gb|EEL75097.1| FMN adenylyltransferase [Bacillus cereus AH676]
 gi|228836992|gb|EEM82333.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 335

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFMSEKNI 328


>gi|38234051|ref|NP_939818.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium diphtheriae NCTC 13129]
 gi|38200313|emb|CAE49998.1| riboflavin biosynthesis protein [Corynebacterium diphtheriae]
          Length = 323

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 153/322 (47%), Gaps = 19/322 (5%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            ++H +E    +P  LK  V+ IG FDG+H GH  ++  A   A     P  +++FNPHP
Sbjct: 5   DIWHRLE---DIPADLKASVITIGVFDGVHRGHRTLVAAATDRAQALGVPSVLVTFNPHP 61

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++++       L   + +  + E +G   +    FT E ++ S E+F   V+ + L  +
Sbjct: 62  LSVLRPDKMPPLLGTVNQRADLAESLGVDHMFAMNFTAELSHLSPEEFFCSVIKDKLNAQ 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  F FG   AG    L+  GEKYG     +D L  N    VSS+ IR+ L +G +
Sbjct: 122 AIVVGKNFTFGYKAAGTTDTLKALGEKYGVEIYVLDLLTENGDV-VSSTAIRSDLLEGDI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-- 235
             A   LG  F++  DV+ G   G   LGFPTAN+     I L ++GVYA          
Sbjct: 181 RRANWGLGREFSVHGDVVRGAGRGGKELGFPTANLYFPDSIALPEDGVYAGWLTVTSSAP 240

Query: 236 --------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y    + G NPT   +    +ESF+ D   ++YG    V F D +RP +K
Sbjct: 241 IDGDMVRGVRYPAAISVGHNPTF-GDKRRSVESFVLDRHADLYGHSIVVEFVDRIRPMVK 299

Query: 288 FKDIEKLKIYMGEDEKKARKIL 309
           F  I++L + +  D  + R IL
Sbjct: 300 FDGIDELLVAIENDVTQTRAIL 321


>gi|45656624|ref|YP_000710.1| riboflavin biosynthesis protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599859|gb|AAS69347.1| riboflavin biosynthesis protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 318

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  FH IE  Q+        VV +GNFDGIHLGH  +L+Q +K++        V++++P+
Sbjct: 1   MITFHTIE--QAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   + +  L     +E+ + + G   L+   F  E A  +AE F++++L++ L+ 
Sbjct: 59  PAIVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK R G+  +L++  EK  +    +D +  N    +SSS +R  +T+G+
Sbjct: 119 KNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLND-TKLSSSYVRRLITEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS 237
           V  A H L   ++I   V+ G K GR +GFPTAN++ + DILL   GVYA   + +    
Sbjct: 178 VKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIE- 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N GRNPT   N  L LES IFDF ++IY Q   + F + +R EIKF  +E L   
Sbjct: 237 YPSMINIGRNPTFGINS-LTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQ 295

Query: 298 MGEDEKKARKILESS 312
           + +DE   R IL+S+
Sbjct: 296 LKQDEILTRNILKST 310


>gi|196042163|ref|ZP_03109446.1| riboflavin biosynthesis protein RibF [Bacillus cereus NVH0597-99]
 gi|196027015|gb|EDX65639.1| riboflavin biosynthesis protein RibF [Bacillus cereus NVH0597-99]
          Length = 323

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 158/320 (49%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKIEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 178 EMEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   +   +
Sbjct: 297 EQIAKDKKTAQEYFANEKNI 316


>gi|89055856|ref|YP_511307.1| FMN adenylyltransferase / riboflavin kinase [Jannaschia sp. CCS1]
 gi|88865405|gb|ABD56282.1| FMN adenylyltransferase [Jannaschia sp. CCS1]
          Length = 307

 Score =  312 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 106/301 (35%), Positives = 155/301 (51%), Gaps = 10/301 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V  + +         KG  VAIGNFDG+H GH  +L  A ++  ++P+ V++F PHPR
Sbjct: 1   MKVLRDHQYTAP---ADKGASVAIGNFDGVHRGHQHVLNLAKRL--DAPLGVVTFEPHPR 55

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +    +P F L     +   L K+G + L+   F    +  +   F++ VLV+ L +  
Sbjct: 56  EVFAPDAPPFRLMNAEARANRLRKLGVNLLVELPFDARLSGLTDAAFVRDVLVDSLGISH 115

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            + G  F +GK R G+   L+  G    F     D L       VSS+ IR AL+ G   
Sbjct: 116 AVVGADFCYGKGRTGNASTLRDMGAALDFDVTIAD-LLEGDGGAVSSTAIRAALSDGRPG 174

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTS 237
           +AA +LG+   IE  V+HGEK GR LG+PTANM L    + + GVYA+    +D     +
Sbjct: 175 DAAEMLGHWHRIEGPVLHGEKRGRELGYPTANMGLEGLHVPQPGVYAVTVEVRDGPHAGT 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  P      P  LE+++FDFS ++YG   +V    YLR E +F  ++ L + 
Sbjct: 235 YGGVANLGVRPMFELERP-NLETYLFDFSGDLYGTHLSVGLVAYLRGEARFDSLDALIVQ 293

Query: 298 M 298
           M
Sbjct: 294 M 294


>gi|316935897|ref|YP_004110879.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           DX-1]
 gi|315603611|gb|ADU46146.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           DX-1]
          Length = 322

 Score =  312 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 109/303 (35%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  F  I          KG VVA+GNFDG+H GH  ++   +       +P   ++F PH
Sbjct: 1   MTGFAVIRDETPTAAIPKGAVVAMGNFDGVHRGHRAVIGACLDMARIKKAPALAVTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR       P F L+  + + ++L   G    +   F    A+ +A  FIQ  L+  L V
Sbjct: 61  PRKFFSPDVPQFRLTDETAKLRLLAGTGLDGAVILSFDARRASTTAHDFIQHELIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK R G   +L       G     +    +     VSSS IR  L +GH
Sbjct: 121 QGIAIGYDFHFGKGRGGSPSMLVGEAPALGIEVD-VQPHVDFGDHPVSSSAIRKCLEQGH 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + +  +VIHG+K GR LG+PTAN++L P+  LK G+YA+R   ++   Y
Sbjct: 180 IAAATEMLGGPWFVTGEVIHGDKRGRDLGYPTANIRLDPECSLKHGIYAVR-VGRNGRHY 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VANFGR PT   NG  LLE F+FDF++ +YG+   V+F  ++R E KF+ IE L   M
Sbjct: 239 DAVANFGRRPTF-DNGAALLEVFVFDFNEPLYGETLDVAFIAFIRAEEKFESIEALIRQM 297

Query: 299 GED 301
            +D
Sbjct: 298 DDD 300


>gi|260435782|ref|ZP_05789752.1| riboflavin biosynthesis protein RibF [Synechococcus sp. WH 8109]
 gi|260413656|gb|EEX06952.1| riboflavin biosynthesis protein RibF [Synechococcus sp. WH 8109]
          Length = 329

 Score =  312 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 100/297 (33%), Positives = 160/297 (53%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   +A+G+FDG+H GH  ++ +AI+   +N+  +V+SF PHPR ++   + +  L  PS
Sbjct: 28  RPTALALGSFDGLHAGHRRVIAEAIQDSPDNAVASVVSFWPHPREVLFGEARL-RLDLPS 86

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +LE +G   L+   FT E A  SAE F+  VL+  L+ + +  GT FRFG  R GD
Sbjct: 87  EKLALLEPLGIHQLVLVPFTRELAQLSAEDFVTSVLLNTLQARRIAVGTNFRFGHQRRGD 146

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++   + G     +  + + + ++ SSS IR AL +  +  A  LLG  +  +  V
Sbjct: 147 AEMLERLAARSGVEVKVVPIVEDQEGRM-SSSRIRAALDQADLTTAKSLLGRAYRFQGRV 205

Query: 197 IHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNG 254
           + G  +GR LG+PTAN+Q+     L   GVYA   +   D      V N G  PT+ P  
Sbjct: 206 VRGRGLGRELGWPTANLQVDGRKALPGLGVYAAWAQLDGDDNRLPAVMNLGPQPTIDPTS 265

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E  + D S E+ G++  V     LR + KF  +E+L   +G D  +AR+IL++
Sbjct: 266 PSAVEVHLLDQSLELEGRQLGVEPVQRLRGQTKFSGLEELSSQIGRDAAQAREILQA 322


>gi|149182495|ref|ZP_01860969.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. SG-1]
 gi|148849826|gb|EDL64002.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. SG-1]
          Length = 315

 Score =  312 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 10/305 (3%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTII-QSSSPIFT 71
                  +A+G FDG+H GH  ++  A+      N    V++F+PHP  ++ +    +  
Sbjct: 14  ADFPPLSMALGYFDGVHKGHQKVINTAVMEAEKRNLNSAVMTFDPHPSVVLGRKHKHVHY 73

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++P   + K++E +G   L   +FT + AN   ++++ + ++  + VK V  G  F +GK
Sbjct: 74  ITPLQDKIKLMETLGVDYLFIVRFTSDFANLHPQEYVDQYIIN-MNVKHVSAGFDFTYGK 132

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              G+   LQ      G  T        +  + +SS+ IR AL+ G     ++LLG  +T
Sbjct: 133 LGKGNMETLQFHSR--GEFTYTTVHKLTDHDEKISSTAIRKALSDGETAKVSNLLGRYYT 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
               VIHG+K GR +GFPTAN++LS D +  K GVYA+R   Q+Q  ++GVAN G  PT 
Sbjct: 191 TSGTVIHGDKRGRKIGFPTANIELSDDYITPKIGVYAVRLYVQNQ-WHNGVANLGYKPTF 249

Query: 251 V--PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
               +  L +E  IFD+S  IYG+  TV + +Y+R E KF  IE+L   + +D+++A   
Sbjct: 250 NNPEDKALSIEVHIFDYSSSIYGEEVTVEWHNYIRSEKKFDGIEQLIAQIEKDKQQAVAY 309

Query: 309 LESSY 313
            +  +
Sbjct: 310 FQKLF 314


>gi|296132892|ref|YP_003640139.1| riboflavin biosynthesis protein RibF [Thermincola sp. JR]
 gi|296031470|gb|ADG82238.1| riboflavin biosynthesis protein RibF [Thermincola potens JR]
          Length = 313

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 106/312 (33%), Positives = 163/312 (52%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M V+++I   ++ PN     VVA+GNFDG+HLGH  ++ +  K+A+       V +F+PH
Sbjct: 1   MEVYYDIRDVKNYPNP----VVALGNFDGVHLGHRELVRRTRKMADEISGTPVVFTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L P   + K++ ++G + ++   F+   AN     F++K+LVE +  
Sbjct: 57  PLKVLLPDSYPPLLLPKEEKIKMMAELGIAVMVIAGFSRRMANLEPADFMKKILVEGVGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F FGK   G   +L++   +  +               VSS+ IR  L +G 
Sbjct: 117 KGIIVGYNFSFGKGGKGTPELLREYAPEGNYRVDV-VPPVTVDGVEVSSTLIRQLLLRGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           V  A   LGY   +   V++G ++GR +GFPTAN+ L+ +IL   +GVYA+R        
Sbjct: 176 VTEARKYLGYFPYVRGKVVYGVQLGRKIGFPTANLDLNHEILVPAKGVYAVRVSCLG-EK 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GVAN G  PT+    P+ LE  IFDF   +YG    V F   LR E  F+D+E+L   
Sbjct: 235 HCGVANIGNKPTLKKENPVNLEVHIFDFDGNLYGHEIKVEFVARLRAEKSFQDLEELTRQ 294

Query: 298 MGEDEKKARKIL 309
           +  D   AR+IL
Sbjct: 295 ICIDAGLARRIL 306


>gi|327399687|ref|YP_004340556.1| riboflavin biosynthesis protein RibF [Hippea maritima DSM 10411]
 gi|327182316|gb|AEA34497.1| riboflavin biosynthesis protein RibF [Hippea maritima DSM 10411]
          Length = 304

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 9/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V  +I     +    +   +A+GNFDGIH GH  ++ + +K++    +   V +F+PH
Sbjct: 1   MRVIRDIYAECDI----EATAIALGNFDGIHRGHQALINETVKLSKKLNLTPAVFTFHPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +I+     F +     + KI+E  G   ++   FT   A      F++ +L++ +  
Sbjct: 57  PKKVIEHIDEPFLIQRFKEKTKIIESFGIDIVVCAHFTQAFAEMEPYNFVKDILIDRMHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  + FGK   G    L++     GF  + I   + N   IVSS+ IR  L  G 
Sbjct: 117 RAICVGHDYTFGKKALGTTKTLRELSNSLGFELIVIPPFKIN-GTIVSSTRIREFLRTGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG  +TI   V  GE  G +LGFPTAN+  + +ILL  GVYA      D   Y
Sbjct: 176 IGLANEFLGRNYTISGIVKEGEGRGSSLGFPTANIYPTNEILLTNGVYAAYVYI-DSKKY 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +   N G NPT        +E+FIFDF+ ++Y +R T+ F D++RPE KFK I+ L   +
Sbjct: 235 AAAVNVGVNPTF-KGTQKHIEAFIFDFNGDLYRKRITIEFIDFIRPERKFKRIDDLISQI 293

Query: 299 GEDEKKARKIL 309
            +D K+ + IL
Sbjct: 294 KQDIKQIKTIL 304


>gi|307293213|ref|ZP_07573059.1| riboflavin biosynthesis protein RibF [Sphingobium chlorophenolicum
           L-1]
 gi|306881279|gb|EFN12495.1| riboflavin biosynthesis protein RibF [Sphingobium chlorophenolicum
           L-1]
          Length = 312

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 165/318 (51%), Gaps = 8/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M   H+   +  +P HL+G ++A+GNFDG H GH  +  +AI +A     P  + +F+PH
Sbjct: 1   MERLHS---SAPMPAHLRGSIMALGNFDGFHAGHQAVARRAIALARAQGRPAIIATFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + + ++P F L+    +E++  + G  A++ + FT E A    + F+  +      V
Sbjct: 58  PMRLFRPNTPWFRLTTLDQRERLFARAGADAMLVFDFTRELAALDPQAFVDLLA--QWGV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+TG  F FGKDRAG    L++ G   G     +  +     +I+SS+ IR AL  G 
Sbjct: 116 AGVVTGEDFTFGKDRAGSIDTLKQLGAPLGLTAQAVAPITGQDGEIISSTRIREALKSGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LL   FTIE  V HG+K+GRT+GFPTAN+ +   +    G+YA+R    D    
Sbjct: 176 CATATRLLTRPFTIEGIVQHGDKLGRTIGFPTANVDMGHYLRPAYGIYAVRALLPDGRVL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G AN G  P+  P    LLE   FDF++ +Y QR  V    +LRPE K   ++ L   +
Sbjct: 236 DGAANLGIRPSFDPPKE-LLEPHFFDFAESLYDQRIEVQLIHFLRPEAKLDGLDALMAAI 294

Query: 299 GEDEKKARKILESSYPLS 316
             D   AR+IL  +  L+
Sbjct: 295 ARDCDDARQILAGTPHLA 312


>gi|229152008|ref|ZP_04280203.1| FMN adenylyltransferase [Bacillus cereus m1550]
 gi|228631357|gb|EEK87991.1| FMN adenylyltransferase [Bacillus cereus m1550]
          Length = 335

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADERGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRSGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   S   +
Sbjct: 310 QIAKDKKTAQEYFMSEKNI 328


>gi|313901839|ref|ZP_07835260.1| riboflavin biosynthesis protein RibF [Thermaerobacter subterraneus
           DSM 13965]
 gi|313467882|gb|EFR63375.1| riboflavin biosynthesis protein RibF [Thermaerobacter subterraneus
           DSM 13965]
          Length = 334

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 105/314 (33%), Positives = 155/314 (49%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V H I   +      +   VAIG FDG+H GH  +L    A   A  +    L+F+PH
Sbjct: 1   MEVIHGIAGWRD----GQPTCVAIGTFDGVHRGHQALLRGAVAAARAQQAVAVALTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        L     +  +   +G    +  +F    +  +AE F ++VL   L+ 
Sbjct: 57  PLAVLAPDRLPPLLGTLDDRLALFASLGIDRTLVARFDHALSQTTAEDFAREVLAGKLQA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  FRFG+   G    L++ G ++GF T  +  +R   +Q+VSSS +R+ L  G 
Sbjct: 117 RAVFVGYNFRFGRGGQGTPADLERWGSQWGFWTHTVPPVRV-GAQLVSSSWVRSLLEMGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V  AA  LG  +++   V+ GE  G  LGFPTAN++L+P + L   GVYA+  RT     
Sbjct: 176 VEIAATALGRLYSVAGRVVRGEGRGAGLGFPTANLELAPGLALPAAGVYAVWVRTPGGLE 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVAN GR PT    G L LE  + D ++++YGQ   V F   LR E +F   E+L   
Sbjct: 236 -PGVANLGRRPTF-GGGALRLEVHLLDGARDLYGQVLRVGFARRLREERRFSGPEELARQ 293

Query: 298 MGEDEKKARKILES 311
           +  D   AR+ L +
Sbjct: 294 IARDVAAAREALGT 307


>gi|86130924|ref|ZP_01049523.1| riboflavin biosynthesis protein RibF [Dokdonia donghaensis MED134]
 gi|85818335|gb|EAQ39495.1| riboflavin biosynthesis protein RibF [Dokdonia donghaensis MED134]
          Length = 317

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 98/298 (32%), Positives = 167/298 (56%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VV IG FDG+HLGH  I+ +  +   AN     VL+F PHPR ++Q  + +  ++  
Sbjct: 14  KGTVVTIGTFDGLHLGHRKIINRINESARANGWESCVLTFFPHPRMVLQKDTSLKLINTI 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +E++LE +    L+ + FTL+ + Y AE F++++LV  L  K VI G   RFG++R  
Sbjct: 74  AEREQLLESLDLDHLVIHPFTLDFSRYHAETFVEEILVNSLNAKKVIIGYDHRFGRNRNA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L++ G+  GF    I + +  +   +SS+ +R AL  G+V  A   L   F +   
Sbjct: 134 NIEDLKRFGKTLGFEVEEISK-QELEDVAISSTKVRKALVSGNVALANSYLSAPFMLNGV 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+ G+ +GRT+G+PTAN++++ D  ++  +GVY  +     +  + G+ N G NPT+   
Sbjct: 193 VVKGKSLGRTIGYPTANLEIAEDYKLIPAQGVYVAKAIINGKPVF-GMMNIGTNPTV-GG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +E++ FDF +++YGQ+  +   + +R E  F  I++L   M  DE  +R  + S
Sbjct: 251 EKQTIETYFFDFDEDLYGQQLEIQLLERIREEKTFDTIDELVAAMKTDEAFSRNYIAS 308


>gi|315302986|ref|ZP_07873704.1| riboflavin biosynthesis protein RibF [Listeria ivanovii FSL F6-596]
 gi|313628636|gb|EFR97051.1| riboflavin biosynthesis protein RibF [Listeria ivanovii FSL F6-596]
          Length = 314

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 165/295 (55%), Gaps = 8/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           V+A+G FDG+HLGH  +++QA +I         VL+F+PHP  ++ +    +  L+P   
Sbjct: 21  VMALGFFDGVHLGHQAVIKQAKQIATQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLED 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + +  +G   +   +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G  
Sbjct: 81  KAEKMTDLGVDIMYVVRFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKM 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+       F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VI
Sbjct: 140 TNLEGYANGR-FEVTIVDK-QTASSDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVI 197

Query: 198 HGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+K GRT+GFPTAN+ ++ D L  K GVYA++FR   +T   G+A+ G N T   +  L
Sbjct: 198 HGDKRGRTIGFPTANILVNEDYLIPKLGVYAVKFRVNGKTHL-GMASIGYNITFKDDQAL 256

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E +I DF +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 257 SIEVYILDFHREIYGEEAEIEWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAD 311


>gi|229012992|ref|ZP_04170157.1| FMN adenylyltransferase [Bacillus mycoides DSM 2048]
 gi|229134616|ref|ZP_04263426.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST196]
 gi|229168548|ref|ZP_04296271.1| FMN adenylyltransferase [Bacillus cereus AH621]
 gi|228614954|gb|EEK72056.1| FMN adenylyltransferase [Bacillus cereus AH621]
 gi|228648877|gb|EEL04902.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST196]
 gi|228748246|gb|EEL98106.1| FMN adenylyltransferase [Bacillus mycoides DSM 2048]
          Length = 335

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 167/320 (52%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           +H+ H  E N+     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 16  IHLTHPHEQNKI---ELPPTVMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPH 72

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  ++E+I+  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 73  PSVVLGKKEAHVEYITPMRLKEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLN 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+++R  +  G
Sbjct: 132 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEYQEEKVSSTSLRKLIRNG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D  
Sbjct: 190 EMEQIPSILGRAYTVEGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-E 248

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 249 WHDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELV 308

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S   +
Sbjct: 309 AQIAQDKKVAQEYFASVKNI 328


>gi|229180085|ref|ZP_04307429.1| FMN adenylyltransferase [Bacillus cereus 172560W]
 gi|229191978|ref|ZP_04318948.1| FMN adenylyltransferase [Bacillus cereus ATCC 10876]
 gi|228591529|gb|EEK49378.1| FMN adenylyltransferase [Bacillus cereus ATCC 10876]
 gi|228603294|gb|EEK60771.1| FMN adenylyltransferase [Bacillus cereus 172560W]
          Length = 335

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 9/313 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKIL 309
            + +D+K A++  
Sbjct: 310 QIAKDKKTAQEYF 322


>gi|167580111|ref|ZP_02372985.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis TXDOH]
 gi|167618176|ref|ZP_02386807.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis Bt4]
 gi|257139999|ref|ZP_05588261.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis E264]
          Length = 330

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 151/313 (48%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVERTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAGD   L+  GE++GF    ++ L +      SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGAKRAGDFASLKAAGERFGFEVEQMETLADADGARFSSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAAARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGIGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAI 296

Query: 299 GEDEKKARKILES 311
            +D    R     
Sbjct: 297 AQDVVDTRAYFAE 309


>gi|296284865|ref|ZP_06862863.1| riboflavin biosynthesis protein [Citromicrobium bathyomarinum
           JL354]
          Length = 291

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 106/293 (36%), Positives = 154/293 (52%), Gaps = 5/293 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+GNFDG H GH  +  +AI+ A     P+ V +F+PHP    +  +P F L+    + 
Sbjct: 1   MALGNFDGFHKGHQAVAGEAIRWAREEERPVIVATFDPHPVQFFRPDTPPFRLTSLEQRH 60

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++    G +A++ + F  E A  SAE FI+ +LVE      V+TG  F FGK   G+  +
Sbjct: 61  ELYLAFGATAMLVFHFDAELAGTSAEDFIEHILVERFGAHGVLTGEDFTFGKGAKGNAAL 120

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G K+G     +  + +  +  VSSS IR  L  G    AA LL   F I   V HG
Sbjct: 121 LKEHGTKHGLEARTVSAVSDGDAV-VSSSRIRDLLKAGEPQAAAQLLTRPFAIRGIVEHG 179

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTMVPNGPLLL 258
           +K GRT+G+PTAN+ L   +  K G+YA+  R         G AN G  P   P    LL
Sbjct: 180 DKRGRTIGYPTANLALEDYLRPKYGIYAVTGRILSSGEELQGAANVGIRPQFEPAKE-LL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E + FDFS ++YGQ   V+   ++RPE KF  ++ L   M  D  +AR++L  
Sbjct: 239 EPYFFDFSGDLYGQEIEVALHHFIRPEAKFDGLDALIAQMDRDCAEARRLLAD 291


>gi|223936323|ref|ZP_03628235.1| riboflavin biosynthesis protein RibF [bacterium Ellin514]
 gi|223894841|gb|EEF61290.1| riboflavin biosynthesis protein RibF [bacterium Ellin514]
          Length = 307

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 92/312 (29%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +  +      L  + +   +AIG FDG+HLGH  I+ Q I   I + +   V++F+ H
Sbjct: 1   MKIIRS---ASELKANGRKVCLAIGFFDGVHLGHQQIIRQTIADSIKHEAVSLVVTFDQH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++        + P   + K +  +G  AL    F    +  S E FI+ +  +   +
Sbjct: 58  PSTVVAPDRIPPLIYPLPHKLKTIGSLGSEALFLIHFDKAFSELSGEAFIRNLANDLGHI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +++  G+ F FG  R+G+  +L+  GE+  F    +  + +   + VSS+ IR A+  G 
Sbjct: 118 ESLCVGSNFTFGYKRSGNVALLKTLGEELKFTVHGMAAV-SLDGKTVSSTRIREAIRTGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ +LG  +++   VI G+++G  LGFPTAN++L   +L   GVYA+    +   SY
Sbjct: 177 LDAASQMLGRTYSLCGPVIKGDQLGHKLGFPTANLKLDGLVLPPTGVYAVHAFVEG-ESY 235

Query: 239 SGVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             V N G  PT+  P     +E  I +F+ ++YG+   ++F + LR E KF  ++ LK+ 
Sbjct: 236 RAVVNIGLRPTLRNPAPERRIEVHILNFTGDLYGKAMEIAFVEKLRDEQKFPSLDALKLQ 295

Query: 298 MGEDEKKARKIL 309
           + +D + A K  
Sbjct: 296 IAKDIEDAAKCF 307


>gi|294828319|ref|NP_713629.2| riboflavin biosynthesis protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293386171|gb|AAN50647.2| riboflavin biosynthesis protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 318

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  FH IE  Q+        VV +GNFDGIHLGH  +L+Q +K++        V++++P+
Sbjct: 1   MITFHTIE--QAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   + +  L     +E+ + + G   L+   F  E A  +AE F++++L++ L+ 
Sbjct: 59  PAIVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK R G+  +L++  EK  +    +D +  N    +SSS +R  +T+G+
Sbjct: 119 KNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLND-TKLSSSYVRRLITEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS 237
           V  A H L   ++I   V+ G K GR +GFPTAN++ + DILL   GVYA   + +    
Sbjct: 178 VKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNMDILLPGIGVYAGLTQVEGIE- 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N GRNPT   N  L LES IFDF ++IY Q   + F + +R EIKF  +E L   
Sbjct: 237 YPSMINIGRNPTFGINS-LTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQ 295

Query: 298 MGEDEKKARKILESS 312
           + +DE   R IL+S+
Sbjct: 296 LKQDEILTRNILKST 310


>gi|330722376|gb|EGH00227.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC2047]
          Length = 321

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 7/302 (2%)

Query: 1   MHVFHNIEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFN 56
           M +   +    +       +  V+ IGNFDG+H GH +IL Q  + A+  N P TV+ F 
Sbjct: 1   MELIRGLHNLDAYRRKFPAQQCVLTIGNFDGVHCGHQMILRQLREKADELNLPATVMVFE 60

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P P            L+P   + ++L + G   +I   FT E    SA +F++ +LV  L
Sbjct: 61  PQPLEFFAGQGAPARLTPFREKVRLLSEAGVDTVICLHFTDELRRQSASEFVKDILVGSL 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            VK +I G  FRFG+ ++GD  +L++ GE++GF       L  N  Q VSS+ +R AL  
Sbjct: 121 GVKYLIVGDDFRFGRKQSGDFQMLKQAGEQFGFGVTNTHTLVMN-GQRVSSTAVRDALNS 179

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
                A  LL   ++I   V++G+++GRT+G PTAN+ L        GV+A+     ++ 
Sbjct: 180 SDFYLAEQLLARPYSISGRVMYGQQLGRTIGVPTANLALKGKKAPLVGVFAVEVAGLEEN 239

Query: 237 SY-SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVAN G  PT+      +LE  +F+F++ IYG+   V F   +R E KF  +E LK
Sbjct: 240 KLVQGVANVGVRPTV-GGKVPVLEVHLFNFNRSIYGEHIRVVFRKKIRDEQKFDGLEALK 298

Query: 296 IY 297
             
Sbjct: 299 KA 300


>gi|327404079|ref|YP_004344917.1| riboflavin biosynthesis protein RibF [Fluviicola taffensis DSM
           16823]
 gi|327319587|gb|AEA44079.1| riboflavin biosynthesis protein RibF [Fluviicola taffensis DSM
           16823]
          Length = 312

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   +   +         ++ +G +DG+HLGH  I+   ++ A   N    + +F+PH
Sbjct: 1   MRVVRQLNSEEKFNRP----ILTLGTYDGVHLGHQEIIRSLVEKARTENKESVLFTFDPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++   S  +  +     + + L+++G   +I + FT E +  SA +F++ VLV  + 
Sbjct: 57  PRKVLYPESYSVKLIDTVDEKLEKLKELGLDTVILFPFTKEFSRLSAMEFVRDVLVNQIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V  +  G    FGK+R G    LQ+ GE Y F    +  +   +   +SS+ IR A+  G
Sbjct: 117 VSEMHIGHDHHFGKNREGSFQELQELGELYDFSVFQLPAIFLEE-TAISSTKIRNAILDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
           +V  A  LLG  F ++  V+ G++IGRT+GFPTAN+ L     I+ K GVYA +      
Sbjct: 176 NVEYANQLLGSSFVLQGKVVKGQQIGRTIGFPTANIDLDNTEKIVPKNGVYAAQVHI-GS 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            SY  V N G  PT+  NG + +E ++FDF+++IY Q   V     +R E +F++IE LK
Sbjct: 235 KSYHAVMNIGTRPTIANNGSVTIEVYLFDFNEDIYDQFIKVEVKQRIRDEQRFENIEDLK 294

Query: 296 IYMGEDEKKARKILES 311
             +  DE  AR    S
Sbjct: 295 NQIQLDEISARNYFSS 310


>gi|302865978|ref|YP_003834615.1| riboflavin biosynthesis protein RibF [Micromonospora aurantiaca
           ATCC 27029]
 gi|315502538|ref|YP_004081425.1| riboflavin biosynthesis protein ribf [Micromonospora sp. L5]
 gi|302568837|gb|ADL45039.1| riboflavin biosynthesis protein RibF [Micromonospora aurantiaca
           ATCC 27029]
 gi|315409157|gb|ADU07274.1| riboflavin biosynthesis protein RibF [Micromonospora sp. L5]
          Length = 308

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 96/310 (30%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +   E   + P      VV IG FDG+H GH   +  A+  A        V++F+PH
Sbjct: 1   MQRWRGYE---AAPGGWGRSVVTIGVFDGVHRGHQATIGHAVARARELGVKSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+ P+ + +++E +G   L    FT+E +    E F+  VLV  L  
Sbjct: 58  PAEVVRPGSHPAVLTEPARKAELIEALGVDVLCVVPFTVEFSRLPPEAFVHDVLVAHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G  +GF       L      + SS+ IR+ +  G 
Sbjct: 118 ALVVVGDNFRFGHRAAGDVPLLERLGRTFGFAVEG-APLVAEAGTVFSSTYIRSCVDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA  LG    +E  V+ G++ GR LG+PTAN+       +  +GVYA R   +D   
Sbjct: 177 VGAAAAALGRPHRVEGVVVRGDQRGRELGYPTANLLTHRYAAVPADGVYAARLVRRDGEP 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +   + G NPT        +E++  DFS ++YG+R  + F  +LR +  +  IE L   
Sbjct: 237 LAAAVSIGTNPTF-SGRERRVEAYALDFSGDLYGERLALDFVAHLREQRTYDAIEPLVAQ 295

Query: 298 MGEDEKKARK 307
           + ED ++ R+
Sbjct: 296 IAEDVERTRR 305


>gi|186681422|ref|YP_001864618.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nostoc
           punctiforme PCC 73102]
 gi|186463874|gb|ACC79675.1| riboflavin biosynthesis protein RibF [Nostoc punctiforme PCC 73102]
          Length = 349

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 165/349 (47%), Gaps = 44/349 (12%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP----------------- 49
           + +  S    L    VA+G FDG+HLGH  +++  +   +                    
Sbjct: 1   MWVASSSEGLLTPTAVALGKFDGVHLGHQRVIQPVLHPCDRLSVASSPQSKENQQQTNQE 60

Query: 50  ---ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
               TV++F+PHP+       P   L+P   + + L  +G   L+   F  E +  + E+
Sbjct: 61  YIYSTVVTFDPHPQEFFTG-QPRTLLTPLDEKVQQLRSLGVEQLVLLPFDKELSALTPEE 119

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK----- 161
           F+QK+LV+ L+ + +  G  F FG+ R+G    LQ    K+      +            
Sbjct: 120 FVQKILVQQLQCQRISIGQDFCFGEKRSGTAKDLQLIAAKHNIPVTIVPLQTYTGDSPTQ 179

Query: 162 ----------SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
                        +S+S IR  L +G + NA  LLG  +T+   V+ G+++GRT+GFPTA
Sbjct: 180 SSCVSTNPTQDARISTSLIRQTLEQGDIENANLLLGRPYTLFGVVVQGQQLGRTIGFPTA 239

Query: 212 NMQLSPDI-LLKEGVYAIRFRTQDQTSYS------GVANFGRNPTMVPNGPLLLESFIFD 264
           N++L  +  L ++GVYA+R  T  +TS +      GV N G  PT+        E  +FD
Sbjct: 240 NLELPKEKFLPRQGVYAVRVFTLSETSNAASSESLGVMNIGNRPTVN-GTYSSAEVHLFD 298

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           +S ++YG++  +    +LRPE KF  +E LK  +  D   A+++L + +
Sbjct: 299 WSGDLYGKKLAIELVKFLRPEQKFPSLEALKTQIQLDCVVAKEVLSAEW 347


>gi|229174475|ref|ZP_04302007.1| FMN adenylyltransferase [Bacillus cereus MM3]
 gi|228609035|gb|EEK66325.1| FMN adenylyltransferase [Bacillus cereus MM3]
          Length = 335

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANIGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|326771724|ref|ZP_08231009.1| riboflavin biosynthesis protein RibF [Actinomyces viscosus C505]
 gi|326637857|gb|EGE38758.1| riboflavin biosynthesis protein RibF [Actinomyces viscosus C505]
          Length = 341

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 22/333 (6%)

Query: 1   MHVFHNIEINQSLPNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANN------SP 49
           M V++  E    +P  L      G VV +G FDG+H GH  +L + +++++        P
Sbjct: 1   MEVWYGAE---QVPASLSAPGGPGAVVTMGIFDGVHRGHQAVLGRVVELSHELAHGDLRP 57

Query: 50  ITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           + V ++F+PHPR++ Q  + +  ++  + +   L  +G  A++   +TL+ A  S + F+
Sbjct: 58  LAVAVTFDPHPRSVHQPEADLPLIASLTDRLASLGDLGLDAVLVITYTLDFAAQSPQDFV 117

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +  L E L  + V+ G   RFG   +GD   L++ G + GF    +  + +++ +  SS+
Sbjct: 118 RTWLEELLGARAVVVGDDVRFGWRNSGDAATLEQIGRQDGFEVEIVSTICSDEGRRWSST 177

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYA 227
            IR  L  G++   + +LG    +   V+ G + GR LGFPTAN++ +   ++  +GVYA
Sbjct: 178 WIRQCLKDGNMRQVSRVLGRPHRLRGVVVRGLRRGRELGFPTANLEAATAGVVPPDGVYA 237

Query: 228 IRFRT-----QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDY 281
                      D        + G NPT        +E+ +       +YG+   V   + 
Sbjct: 238 GWLIRGCADEGDVQRLPAAISIGTNPTFDDVPQRTVEAHVLGRADLNLYGEEVGVELVER 297

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           LRP + F  ++ L + M  D +   +IL    P
Sbjct: 298 LRPMLAFDGLDALLVQMRADIEDTARILGVPVP 330


>gi|300777876|ref|ZP_07087734.1| possible FAD synthetase [Chryseobacterium gleum ATCC 35910]
 gi|300503386|gb|EFK34526.1| possible FAD synthetase [Chryseobacterium gleum ATCC 35910]
          Length = 306

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 180/311 (57%), Gaps = 10/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M VF N     S     K   +++G FDG+HLGH  I+++  +I   NN    +L+F PH
Sbjct: 1   MKVFKNFTDYSS----QKPLALSLGMFDGVHLGHKSIIDELTQIGTENNLETAILTFWPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +   +  +  L+    +++++EK G   L   +F  E  N + E+F++++LV+ L V
Sbjct: 57  PRFVFNPNEDLKLLNTLEEKKQLVEKYGIDNLFLKEFDEEFRNLTGEEFVRQILVDKLNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK+++G+  +LQK  ++ GF    ++ +  +++  +SS+ +R AL  G+
Sbjct: 117 KYLIIGYDHSFGKNKSGNFELLQKLSKELGFEVEQMEAINIHEN-NISSTKVRNALLAGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A  +LGY +++   V+HG+KIGRT+G+PTAN+      +L K+G Y +    +    
Sbjct: 176 IQEANEMLGYSYSVSGTVVHGKKIGRTIGYPTANIDTESIKLLPKKGAYIVEVFVKGN-Q 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+ + G NPT+     L +E +I DF ++IY ++ TVSF D+L  EIKF+ ++KL   
Sbjct: 235 YKGMLSIGTNPTVN-GEKLTVEVYILDFDEDIYDEKITVSFRDFLHDEIKFEGLDKLIER 293

Query: 298 MGEDEKKARKI 308
           + ED+K   + 
Sbjct: 294 LDEDKKITEEF 304


>gi|209886344|ref|YP_002290201.1| riboflavin biosynthesis protein RibF [Oligotropha carboxidovorans
           OM5]
 gi|209874540|gb|ACI94336.1| riboflavin biosynthesis protein RibF [Oligotropha carboxidovorans
           OM5]
          Length = 327

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 170/314 (54%), Gaps = 8/314 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHP 59
            +  +   N  +P   +G  +A+GNFDG+HLGH  ++E A+    + + P   L+F PHP
Sbjct: 7   QIIRDTTPNADIP---RGATIALGNFDGVHLGHRTVIEAALTMAKSAHQPAFALTFEPHP 63

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R+  +  +P F L+  + + ++L   G    I   F    A   A++FI   L+E L V 
Sbjct: 64  RSFFKPDAPPFRLTDETTKLRLLAGTGLDGAIVLTFDAARAATPAQEFINHELIERLGVS 123

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G  F FGK R G    L + G + G     +          +SSS IR AL +G V
Sbjct: 124 GISIGDDFHFGKGRGGTPATLVEWGRQRGIPV-HVQTHVGLADMPISSSAIRAALAEGRV 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-FRTQDQTSY 238
            +A  +LG  + +   VIHG K GR LG+PTAN++L+P + L+ G+YA+R  R   +   
Sbjct: 183 RDATAMLGSPWFVNGTVIHGAKRGRDLGYPTANIRLAPHVDLQHGIYAVRVGRGGGRELL 242

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA++GR PT   NG  LLE F+FDF+  +Y +   V+F +YLRPE KF D+  L   M
Sbjct: 243 GGVASYGRRPTF-DNGDALLEVFLFDFAGSLYDEVLDVAFIEYLRPERKFDDLAALVRQM 301

Query: 299 GEDEKKARKILESS 312
            +D  +AR +L ++
Sbjct: 302 DDDSIRARAVLRAA 315


>gi|21672433|ref|NP_660500.1| riboflavin biosynthesis protein RibF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091145|sp|Q8K9Z1|RIBF_BUCAP RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|21623044|gb|AAM67711.1| riboflavin biosynthesis protein RibF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 312

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 6/312 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +   I    +L        V+IGNFDG+HLGH  +L    KI   + I   ++ F P 
Sbjct: 1   MKLIRGI---HNLKKINSNSAVSIGNFDGVHLGHQKLLSNLYKIGKKNNILTVLILFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   + + +    L+    + K ++      ++  KF    ++ SAE+FI+ +L+  L +
Sbjct: 58  PLEFLNNKNSPKRLTTIQNKIKYIQSWKIDIILCIKFNESFSSLSAEKFIKNILITKLNI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  FRFG  R G+  +L++ G +Y F  + I  L       +SS+NIR  L +  
Sbjct: 118 KFIIIGDDFRFGSKRNGNISLLKEIGYQYNFKVIEISSLLYKNKIKISSTNIRKCLLENK 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F+I   VIHG KIGR LG+PTAN+ L  +I L  GVYA++        +
Sbjct: 178 IELARKLLGRPFSISGRVIHGNKIGRKLGYPTANISLRKNIPLNNGVYAVKISCFFNKKF 237

Query: 239 SGVANFGRNPT-MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G+ N G  P+        LLE  +F+F+  +Y ++  V  +  +R E  F    KLK  
Sbjct: 238 VGICNIGIKPSYFSSKKHRLLEVHLFNFNLNLYEEKIEVFLYKKIRNECFFSSKNKLKEQ 297

Query: 298 MGEDEKKARKIL 309
           + +D +  +K  
Sbjct: 298 ISKDIEIVKKYF 309


>gi|167465517|ref|ZP_02330606.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 292

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 97/293 (33%), Positives = 142/293 (48%), Gaps = 7/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDG+HLGH  ++ +A+        P  V++F PHP+ ++        ++P   +
Sbjct: 4   VMAIGQFDGVHLGHQEVIGRALSMASEKKIPSAVMTFYPHPKEVLGQQIYTDVITPLDHK 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LEK+G        F       SAE F+++VL+  L V  ++ G  F FG    G   
Sbjct: 64  MDCLEKLGIDYAYVLHFDESLMKLSAETFVEEVLIP-LNVADLVIGFDFTFGYKGLGTPD 122

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +      +    +     N     SS+ IR+AL  G V+ A  LLG  ++I   VI 
Sbjct: 123 KLIEWSNGR-YGVEVVSPFTQN-GIKTSSTEIRSALKDGDVMYANELLGRYYSIRGKVIG 180

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GRT+GFPTANM +  P +    GVYA+    +    Y GV + G  PT   +  + 
Sbjct: 181 GDRRGRTIGFPTANMDIKEPYVTPAIGVYAVYTWVKG-KRYKGVMSIGTKPTFSSDKRIT 239

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           LE  I DF + IYG+     F  +LRPE KF  +E L   + +D K A   L 
Sbjct: 240 LEVHILDFHETIYGEDIQADFVCFLRPEKKFSSVEALVAQIQQDVKAAETKLA 292


>gi|146342886|ref|YP_001207934.1| riboflavin biosynthesis protein ribF/bifunctional flavokinase/FAD
           synthetase [Bradyrhizobium sp. ORS278]
 gi|146195692|emb|CAL79719.1| riboflavin biosynthesis protein ribF; bifunctional : flavokinase;
           FAD synthetase [Bradyrhizobium sp. ORS278]
          Length = 326

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 125/323 (38%), Positives = 175/323 (54%), Gaps = 7/323 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  F  I       + LKG VVA+GNFDG+HLGH  ++E AI+   A   P   L+F PH
Sbjct: 1   MPAFQIIRDATPPQHILKGAVVAMGNFDGVHLGHRAVIEAAIEMGRAKGRPALALTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     ++P F L+  + + ++L   G +  +   F    A  SA+ FI   L+  L V
Sbjct: 61  PRRFFSPNTPQFRLTDEAAKLRLLAGAGLAGAVVMTFDKGRAQTSAQDFIHHDLIGRLGV 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  F FGK R G   +L     K G  TV +    +   + VSS+ IR AL +G 
Sbjct: 121 SGIAVGYDFHFGKGRVGSPSLLASEAPKLGI-TVEVQPHVDIDERPVSSTAIREALAEGQ 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQ 235
           V  A  +LG  + + ++VIHGEK GR LG+PTANM+L  D  L+ G+YA+R    R  ++
Sbjct: 180 VAEATAMLGGPWFVTAEVIHGEKRGRDLGYPTANMRLDRDCGLRHGIYAVRVGRGRGANR 239

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GVANFGR PT   NG  LLE+F+FDF   +YG+   V+F  ++R E +F  IE L 
Sbjct: 240 VLIDGVANFGRRPTF-DNGAPLLETFLFDFKDSLYGEVLDVAFIGFIREEARFTSIEALI 298

Query: 296 IYMGEDEKKARKILESSYPLSER 318
             M +D  +AR +L ++  L  R
Sbjct: 299 RQMDDDSARARAVLAANAGLFPR 321


>gi|30249137|ref|NP_841207.1| cytidylyltransferase:riboflavin kinase / FAD synthetase
           [Nitrosomonas europaea ATCC 19718]
 gi|30180456|emb|CAD85061.1| Cytidylyltransferase:Riboflavin kinase / FAD synthetase
           [Nitrosomonas europaea ATCC 19718]
          Length = 323

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +     I +  P       + IGNFDG+HLGH  ++ +  ++A        V++F PH
Sbjct: 1   MRITRRSVIYRGEPV-----ALTIGNFDGVHLGHQAMIARLKRVAGRLGIASCVMTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  +        L+    + ++L   G S     +F  E A  SAE FI ++L++ + V
Sbjct: 56  PRERLMPEQAPARLTDLREKLELLAGYGVSRTQICRFDHEFAGISAESFITRILLQEMNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFG  R+GD  +L+K   +       +  +  ++ + VSS+ +R AL  G+
Sbjct: 116 RWLLIGEDFRFGARRSGDLTLLRKFFSEPD-ELEVMSPVTVDELR-VSSTAVRDALASGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG  ++I   V+ G K+G+ LGFPTAN+ L    L   G++ +     + + +
Sbjct: 174 LDLAADFLGRPYSISGRVVDGIKLGKKLGFPTANIWLKHHHLPLSGIFVVEANWCNDSGH 233

Query: 239 ----SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GVA+ G  PT+  +   LLE  +FDF ++IYGQ   V F   LR E KF D+E L
Sbjct: 234 TRRIRGVASVGVRPTVFEHAQPLLEVHLFDFDEQIYGQHLRVDFLQKLRDEEKFPDMETL 293

Query: 295 KIYMGEDEKKARKILESS 312
              + +D  +A+     +
Sbjct: 294 VKQIEQDVDRAKAYFSRT 311


>gi|327441007|dbj|BAK17372.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 316

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFN 56
           M+V H ++    L   ++     +AIG FDG+H GH  ++E A + A   NS   V++F+
Sbjct: 1   MNVIH-LKYPHQLAQEIEKEAYSLAIGFFDGVHKGHQAVIEVAKQKAEQLNSKSAVMTFD 59

Query: 57  PHPRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP  ++ + +  +F ++P S +    +K+    +    FT + A  + E+FI+  +V+ 
Sbjct: 60  PHPSIVLGRRNEKVFYITPLSQKIDTFKKLNIDTVFVVNFTSDFAKLTPEEFIKYFIVD- 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L V+ V  G  F FG    G+  ++ +    KYG   V + E + ++ + +SS+ IR AL
Sbjct: 119 LNVQHVTAGFDFSFGAYGKGNMELMDQLSNGKYG---VTVIEKQQDEVEKISSTRIRKAL 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
             G +  A +LLG  F +   V+HG+K GRT+GFPTAN+Q +    +   GVYA++   Q
Sbjct: 176 QDGDMEQARNLLGRAFEVPGIVVHGDKRGRTMGFPTANVQAMEGCYIPATGVYAVKISVQ 235

Query: 234 DQTSYSGVANFGRNPTMV--PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +   Y GV N G  PT        L +E  I +F++ IYG+   V ++  +R E KF  I
Sbjct: 236 N-KWYDGVCNVGYKPTFNNPDEKQLSIEVHILNFNKNIYGEEVVVGWYKRIRSERKFNGI 294

Query: 292 EKLKIYMGEDEKKARKILES 311
           E L   +  D+++A    E 
Sbjct: 295 EALIEQIELDKQQAIAYFEQ 314


>gi|225865788|ref|YP_002751166.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB102]
 gi|225786991|gb|ACO27208.1| riboflavin biosynthesis protein RibF [Bacillus cereus 03BB102]
          Length = 323

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 158/320 (49%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PH
Sbjct: 1   MKLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L 
Sbjct: 61  PSVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDGSFAGLLPQQFVDDYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G
Sbjct: 120 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +     
Sbjct: 178 EMEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L 
Sbjct: 237 WYDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELV 296

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   +   +
Sbjct: 297 EQIAKDKKTAQEYFANEKNI 316


>gi|47569086|ref|ZP_00239775.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9241]
 gi|47554248|gb|EAL12610.1| riboflavin biosynthesis protein RibF [Bacillus cereus G9241]
          Length = 335

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVVGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|289209716|ref|YP_003461782.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp. K90mix]
 gi|288945347|gb|ADC73046.1| riboflavin biosynthesis protein RibF [Thioalkalivibrio sp. K90mix]
          Length = 320

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 94/320 (29%), Positives = 155/320 (48%), Gaps = 11/320 (3%)

Query: 1   MHVFHNI---EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSF 55
           M +   +   +   S    + G VV IGNFDG+H GH  +L + ++      +P  +++F
Sbjct: 1   MRLIRGLGPSDSRASTAAAVHGAVVTIGNFDGLHRGHQAVLGRLLEAAQDRQAPSVLMTF 60

Query: 56  NPHPRTIIQSS----SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
            P PR    S      P   L     +   L   G  A+   +F  + A  SA  FI++V
Sbjct: 61  EPLPREYFGSRPEAPDPPGRLQRLRDRLITLGDTGLEAVWILRFDAQLAGLSATAFIEEV 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           L + L  + V+ G  FRFG+ R GD+ ++++ GE+ GF       + + + + +SS+ +R
Sbjct: 121 LHQRLGAQHVLVGDDFRFGRGREGDQALMRREGERLGFSVEGTPTVADAEGR-ISSTRVR 179

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            A   G     A LLG  + +   V HG+K GRT+GFPTAN+++ P  L   GVY+   R
Sbjct: 180 AAALAGDFTRMAELLGRPYRLHGRVAHGDKRGRTIGFPTANLRMGPWPLALRGVYSGWLR 239

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                +   VAN G  PT+       LE+ + + S ++YG+         +R E +F+ +
Sbjct: 240 RASGDALPAVANIGWRPTVA-GTEQRLEAHVLEGSPDLYGEAVCFEPIARVRGEQRFEGL 298

Query: 292 EKLKIYMGEDEKKARKILES 311
           + L   +  D + AR+ +  
Sbjct: 299 DALCAQIARDVETAREQIRQ 318


>gi|261492879|ref|ZP_05989425.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496771|ref|ZP_05993146.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307610|gb|EEY08938.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311420|gb|EEY12577.1| riboflavin kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 320

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 114/323 (35%), Positives = 169/323 (52%), Gaps = 18/323 (5%)

Query: 1   MHV---FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSF 55
           M +   FHN++ + +L    +G V++IGNFDG+HLGH  IL +     +    P  V+ F
Sbjct: 1   MQLIRGFHNLDKHIALN---QGCVLSIGNFDGVHLGHQNILARLCDRALDLGLPSVVMLF 57

Query: 56  NPHPRTIIQSSS-------PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
            P PR      S       P   L     + K LE+ G   ++  +F+ + A  SA+ FI
Sbjct: 58  EPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCVRFSEKFAQISADDFI 117

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
             +L + L+V+ +  G  FRFG  RAG    L+  G KY F         +   + +SSS
Sbjct: 118 SDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAVEE-SHTHSLNEERISSS 176

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            +R AL    +  A  LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   + V+ +
Sbjct: 177 LVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPTANIMLNRLVTPIQEVFVV 236

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
           + +T+ Q S++G+AN G  PT+    P LLE  IFDF+  IYG+   V F   LR EIKF
Sbjct: 237 KVKTK-QGSFNGIANVGNRPTINGTKP-LLEVHIFDFNASIYGEAIEVIFLKKLRNEIKF 294

Query: 289 KDIEKLKIYMGEDEKKARKILES 311
            D E LK  + +D  +A +  + 
Sbjct: 295 PDFEALKAQIEKDRLQAVEFFKE 317


>gi|73662802|ref|YP_301583.1| riboflavin kinase; FAD synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495317|dbj|BAE18638.1| riboflavin kinase; FAD synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 323

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 118/323 (36%), Positives = 178/323 (55%), Gaps = 18/323 (5%)

Query: 1   MHVF---HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSF 55
           M V    H I+ NQ +   +    +A G FDG+H GH  + E   A   + N    V++F
Sbjct: 1   MKVIEVAHPIQDNQYITEAV---AMAFGFFDGMHKGHAKVFETLDAKAKSQNLKKAVMTF 57

Query: 56  NPHPRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           +PHP  ++         L+P   + +ILE  G    I   F+ + A  +AE+FIQ  +++
Sbjct: 58  DPHPSVVLNPKLKRTDYLTPIQDKVEILESYGIDYCIVINFSSKFAEVTAEEFIQDYIIK 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              VK VI G  F FGK   G+  IL +  E   F+T  + + +  +S+ +S+++IR +L
Sbjct: 118 N-NVKEVIAGFDFTFGKFGKGNMMILDEMSE---FNTTVVSK-QEIESEKISTTDIRKSL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ 233
             G +  A   LGYR+ I+  V+ GEK GRT+GFPTAN+Q S   +L K GVYA+     
Sbjct: 173 KTGDLQKANEELGYRYRIKGTVVQGEKRGRTIGFPTANVQPSGDYVLPKNGVYAVSMEIG 232

Query: 234 -DQTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            ++ +Y GVAN G  PT        +++E  +FDFS+ IYG+R TV +  YLRPEIKF  
Sbjct: 233 VNKETYRGVANVGVKPTFHDPSKAQVVIEVNLFDFSENIYGERVTVYWHHYLRPEIKFDG 292

Query: 291 IEKLKIYMGEDEKKARKILESSY 313
           I+ L   M +D++KA+ +L   +
Sbjct: 293 IDPLVEQMNKDKEKAKYLLSVDF 315


>gi|228954085|ref|ZP_04116114.1| FMN adenylyltransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229071307|ref|ZP_04204530.1| FMN adenylyltransferase [Bacillus cereus F65185]
 gi|229081064|ref|ZP_04213574.1| FMN adenylyltransferase [Bacillus cereus Rock4-2]
 gi|228702108|gb|EEL54584.1| FMN adenylyltransferase [Bacillus cereus Rock4-2]
 gi|228711761|gb|EEL63713.1| FMN adenylyltransferase [Bacillus cereus F65185]
 gi|228805651|gb|EEM52241.1| FMN adenylyltransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 335

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 9/313 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A KI         V++F+PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKKIADDRGYKSAVMTFHPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R +      
Sbjct: 191 MEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHG-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIRAEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKIL 309
            + +D+K A++  
Sbjct: 310 QIAKDKKTAQEYF 322


>gi|159028394|emb|CAO89836.1| ribF [Microcystis aeruginosa PCC 7806]
          Length = 319

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 6/301 (1%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L    +A+GNFDG+HLGH  +L+   +     P TV+SF PHPR           L+P  
Sbjct: 24  LAPSAIALGNFDGLHLGHQTVLQPIFQDEPAYP-TVVSFTPHPREFFTGEK-WQLLTPLG 81

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE +G   L+   F+ + A+ +   FI+++LVE L+ K++  G  FRFG  R G 
Sbjct: 82  EKVEVLENLGVKQLVLLPFSAQLASLTPLAFIKQILVEKLQAKSISIGQDFRFGYRRQGT 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L +   ++      +  L+N  +  +SSS IR AL  G+V  A  +LG  +++   V
Sbjct: 142 AEDLLQIASQFNIKVEIVA-LKNCGTGRISSSLIRQALAAGNVEQAGQMLGRPYSLTGRV 200

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + G+++GRTLGF TAN+Q+ PD LL   GVY       D +    V N G  PT+     
Sbjct: 201 VIGQQLGRTLGFHTANLQVPPDKLLPRLGVYCGWVH-LDGSRLPAVMNIGYRPTI-EGKT 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           + +E  + D+S  +Y +  T+    +LRPE KF  +++LK  +  D  ++R IL S    
Sbjct: 259 ISVEIHLLDWSGNVYDRILTMDLVQFLRPEQKFNSLDRLKNQIEIDCDRSRLILTSVTDN 318

Query: 316 S 316
           S
Sbjct: 319 S 319


>gi|260583748|ref|ZP_05851496.1| riboflavin biosynthesis protein RibF [Granulicatella elegans ATCC
           700633]
 gi|260158374|gb|EEW93442.1| riboflavin biosynthesis protein RibF [Granulicatella elegans ATCC
           700633]
          Length = 313

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 105/317 (33%), Positives = 162/317 (51%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +       +      +  V+A+G FDGIHLGH  +++QA + A      + ++SF+ H
Sbjct: 1   MQIIKITHPYEPSQIVQEPIVLALGFFDGIHLGHQEVIQQAKEKAQELGVKLALMSFDHH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  I Q + P  +  LSP   + ++LE+ G        FT E A+ S ++F+ + +V  L
Sbjct: 61  PSIIFQGADPDELQYLSPFERKIELLEEFGVDIFYVIDFTKEFASLSPQEFVDQYMV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              TV+ G  + +GK    +  +L    ++  F  V I E +  K Q + S+ IR  L  
Sbjct: 120 NAVTVVAGFDYTYGKKEIANMELLPTYAKER-FSIVTISEQQTEK-QKIGSTAIRNYLET 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
           G +  A  LLGY +T+   V+HG   G  L GFPTAN+ +S D  LLK+GVY +  + +D
Sbjct: 178 GQIEEANALLGYEYTMIGKVVHGFGRGSALLGFPTANIDVSTDTYLLKKGVYIVEIQVED 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y  +A+ G NPT      + +E +I DF ++IY     V +  YLR E+KF  +E L
Sbjct: 238 -KWYPAMASIGVNPTFNDVTKITIEVYILDFQRDIYELPVRVKWLHYLRDELKFDGVEAL 296

Query: 295 KIYMGEDEKKARKILES 311
              + EDE   +K  E 
Sbjct: 297 IAQLKEDEVNTKKYFEK 313


>gi|318062239|ref|ZP_07980960.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. SA3_actG]
 gi|318077164|ref|ZP_07984496.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. SA3_actF]
          Length = 320

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++  +G  AL+   FT E +  S   F + VL E L  
Sbjct: 58  PSEVVRPGSHPPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+  +L + G +  F    +D   +      Q  SS+  R  + 
Sbjct: 118 KVVVEGPNFRFGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVAD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R   KF  I++
Sbjct: 238 -EAMPAAISVGTNPQF-DAKHRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDE 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M +D K++R ++  
Sbjct: 296 LLTAMADDVKRSRALIAE 313


>gi|118580929|ref|YP_902179.1| riboflavin biosynthesis protein RibF [Pelobacter propionicus DSM
           2379]
 gi|118503639|gb|ABL00122.1| FMN adenylyltransferase [Pelobacter propionicus DSM 2379]
          Length = 325

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 155/313 (49%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +    EI      +    VV IGNFDG+H GH  +L    + +     P  V++F PH
Sbjct: 1   MRILTGTEI---FNKNFVDSVVTIGNFDGVHRGHVALLRHLKQQSARLALPSVVVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++    +  ++ + G   L+   FT   +  SAE F++ VL   L +
Sbjct: 58  PLALLTPEISPTLITTFEQKCALIGEQGVDCLVVIGFTQAFSMLSAEAFVRDVLCHSLGM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  + FG+DR G+   L +   +  F    +D +  +   + SSS +R  +T+G 
Sbjct: 118 RHIIIGHDYAFGRDRQGNYETLARMMGECRFTLEELDPVGTD-GLVFSSSLVRRLVTEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AA +LG    +   V+HG ++GR LGFPTAN+    +++  +GVYA+    +    Y
Sbjct: 177 VSAAARILGRYHVVAGHVVHGRQVGRELGFPTANVAPQNELIPHDGVYAVMVAVEG-ELY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT+   G   +E F+ DFS ++Y +  ++ F   LR E KF D + L   +
Sbjct: 236 QGACNIGTNPTL-GQGERSIEVFLLDFSGQLYDRELSICFVQRLRGERKFPDAQTLIRAI 294

Query: 299 GEDEKKARKILES 311
            +D +  R +L +
Sbjct: 295 RQDVQTTRDVLAA 307


>gi|319943231|ref|ZP_08017514.1| riboflavin biosynthesis protein RibF [Lautropia mirabilis ATCC
           51599]
 gi|319743773|gb|EFV96177.1| riboflavin biosynthesis protein RibF [Lautropia mirabilis ATCC
           51599]
          Length = 329

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 21/327 (6%)

Query: 1   MHVFHNIEINQSLPNHL-KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +  ++      P HL +   + IGNFDG+HLGH  ++   +  A     P  VL+F P
Sbjct: 1   MKILRSLP-----PAHLDQPCALTIGNFDGVHLGHQALVRTLVADAREAGLPAAVLTFEP 55

Query: 58  HPRTIIQSSSP---------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           HPR    + +             +S    + ++L  +G   +    F    A + AE F+
Sbjct: 56  HPREYFHALARQRGRDVGPEPVRISTLRDRLEMLASLGVDRVHLAPFDQRVAQWPAEDFV 115

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +  L + L+ + +  GT F FG  R GD G+L+  G++ G   + +  +  +    +SSS
Sbjct: 116 RNCLAQGLQARHIRIGTDFCFGAQRQGDFGMLKSVGQQCGIRVLAMPTV-EDAGVRISSS 174

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
            IR AL +     AA +LG  + I   V HG ++G  LGFPT N++        +G++ +
Sbjct: 175 LIREALLQADFPWAAQMLGRPYAISGRVSHGRRLGTRLGFPTLNLRFPWGRPALQGIFVV 234

Query: 229 RFRTQDQTS---YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           +             GVA+FG  P +  +G  LLE  + D+S + YG+   V F + LR E
Sbjct: 235 QVYGLSDDPAQAVPGVASFGTRPAVEADGAWLLEVHLLDWSGDAYGRLVRVEFLEKLRDE 294

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESS 312
           + F D++ L   + +D +KAR   + +
Sbjct: 295 LPFPDLDSLGRQIADDVRKARAHFQKT 321


>gi|76811383|ref|YP_332536.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 1710b]
 gi|126440536|ref|YP_001058019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei 668]
 gi|134281261|ref|ZP_01767970.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           305]
 gi|217419434|ref|ZP_03450940.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           576]
 gi|226194374|ref|ZP_03789972.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811170|ref|YP_002895621.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           MSHR346]
 gi|238562664|ref|ZP_00440046.2| riboflavin biosynthesis protein RibF [Burkholderia mallei GB8 horse
           4]
 gi|251766705|ref|ZP_04819769.1| riboflavin biosynthesis protein RibF [Burkholderia mallei PRL-20]
 gi|254175788|ref|ZP_04882448.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           10399]
 gi|254190883|ref|ZP_04897390.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196365|ref|ZP_04902789.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           S13]
 gi|254202508|ref|ZP_04908871.1| riboflavin biosynthesis protein RibF [Burkholderia mallei FMH]
 gi|254207843|ref|ZP_04914193.1| riboflavin biosynthesis protein RibF [Burkholderia mallei JHU]
 gi|254260432|ref|ZP_04951486.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710a]
 gi|254356262|ref|ZP_04972538.1| riboflavin biosynthesis protein RibF [Burkholderia mallei
           2002721280]
 gi|76580836|gb|ABA50311.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710b]
 gi|126220029|gb|ABN83535.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           668]
 gi|134247567|gb|EBA47652.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           305]
 gi|147746755|gb|EDK53832.1| riboflavin biosynthesis protein RibF [Burkholderia mallei FMH]
 gi|147751737|gb|EDK58804.1| riboflavin biosynthesis protein RibF [Burkholderia mallei JHU]
 gi|148025259|gb|EDK83413.1| riboflavin biosynthesis protein RibF [Burkholderia mallei
           2002721280]
 gi|157938558|gb|EDO94228.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696832|gb|EDP86802.1| riboflavin biosynthesis protein RibF [Burkholderia mallei ATCC
           10399]
 gi|169653108|gb|EDS85801.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           S13]
 gi|217396738|gb|EEC36754.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           576]
 gi|225933459|gb|EEH29448.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505679|gb|ACQ97997.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           MSHR346]
 gi|238522163|gb|EEP85609.1| riboflavin biosynthesis protein RibF [Burkholderia mallei GB8 horse
           4]
 gi|243064981|gb|EES47167.1| riboflavin biosynthesis protein RibF [Burkholderia mallei PRL-20]
 gi|254219121|gb|EET08505.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1710a]
          Length = 345

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 4/309 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  + ++
Sbjct: 76  FNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIM 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G +  A
Sbjct: 136 VGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAGDLDAA 195

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R          GVA
Sbjct: 196 ARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA 255

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   + +D 
Sbjct: 256 SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDV 315

Query: 303 KKARKILES 311
              R     
Sbjct: 316 VDTRAYFAE 324


>gi|325914856|ref|ZP_08177191.1| FMN adenylyltransferase ;riboflavin kinase [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538947|gb|EGD10608.1| FMN adenylyltransferase ;riboflavin kinase [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 343

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/293 (35%), Positives = 157/293 (53%), Gaps = 5/293 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+HLGH  +++ AI  A     P   LSF P PR     ++P   L+    + 
Sbjct: 2   VCIGAFDGLHLGHRTLVQHAIARARALGVPAVALSFEPLPREFFAPAAPPPRLTLARAKI 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L   G  ++   +F    +  SAE F++  LV  L  K V  G +FRFG  R GD  +
Sbjct: 62  EGLYDFGADSVGLIRFDGRLSKMSAEDFVRLALVGRLCAKEVWIGPEFRFGHRRGGDIAL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+  GE+YGF    I  +  +  + +S++ IR  L  G  ++AA LLG  + I   V+ G
Sbjct: 122 LRALGEQYGFVAGEITPVHLH-GERISATRIRELLGAGEFVHAADLLGRPYAIGGRVVRG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRTLG+PTAN++  P      G+YA       +  +  V++FG  PT+    P LLE
Sbjct: 181 KQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVSEQPWPSVSSFGTRPTVAGVEP-LLE 238

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + +FDF  ++YG+   V F   LR E KF  ++ L + M  D ++AR +L++S
Sbjct: 239 AHLFDFQGDLYGRHLEVEFVAKLRDEEKFDGLDALTVQMHRDAEQARAVLKAS 291


>gi|229157385|ref|ZP_04285463.1| FMN adenylyltransferase [Bacillus cereus ATCC 4342]
 gi|228626112|gb|EEK82861.1| FMN adenylyltransferase [Bacillus cereus ATCC 4342]
          Length = 335

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|229162745|ref|ZP_04290702.1| FMN adenylyltransferase [Bacillus cereus R309803]
 gi|228620627|gb|EEK77496.1| FMN adenylyltransferase [Bacillus cereus R309803]
          Length = 335

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   +++ L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVENLGIDILYVVKFDESFAGLLPQQFVDDYIID-LNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|183222424|ref|YP_001840420.1| riboflavin biosynthesis protein RibF [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912464|ref|YP_001964019.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167777140|gb|ABZ95441.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167780846|gb|ABZ99144.1| Riboflavin biosynthesis protein RibF [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 309

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNP 57
           M +  ++E   S+ N  + G  + +GNFDGIH+GH  +L + ++ A     P  V+++ P
Sbjct: 1   MKIIRSLE---SIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P  ++        LS    +E+++   G   L+   FTLE +  +AE F++ ++++ L 
Sbjct: 58  NPSVVLGKKPNFKYLSSEREKEELIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLN 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G    FG +R GD  +L     KYG+     + +    S+ +SSS IR  L KG
Sbjct: 118 AKHIVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKKDSK-ISSSLIRGFLDKG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +  A  LLG  + I   VI G K GRT+GFPTAN+Q+  D LL   GVYA   +  D  
Sbjct: 177 EMEEAKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVK-LDGK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + G+ N G NPT    G L +E  +FDF   +YG+   +     +R E KF  IE LK 
Sbjct: 236 DHQGMVNIGFNPTFDGLG-LHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKA 294

Query: 297 YMGEDEKKARKILE 310
            +  D++ + +IL+
Sbjct: 295 QLTIDKETSLQILQ 308


>gi|17232340|ref|NP_488888.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nostoc sp.
           PCC 7120]
 gi|17133985|dbj|BAB76547.1| riboflavin kinase/FAD synthase [Nostoc sp. PCC 7120]
          Length = 362

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 49/352 (13%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP---------------- 49
           ++ +  S    L    VA+G FDG+HLGH  +++  ++   ++                 
Sbjct: 10  SVWVASSTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPP 69

Query: 50  --------ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
                    TV++F PHP+           L+P   + + L  +G   L+   F  E   
Sbjct: 70  AAPQERIYSTVVTFRPHPQEFFTG-QARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTA 128

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID------ 155
            S E+F++K+LV+ L  + +  G  F FGK R G    LQ    KY      +       
Sbjct: 129 LSPEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTAKDLQLIAAKYHIPVSIVPLQTSDG 188

Query: 156 ---------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                       + +   +S+S IR AL  G +  A   LG  + +   V+ GE++GRT+
Sbjct: 189 QFLEDGNCGSFESLEDAPISTSLIRQALETGDIKTANRFLGRPYILIGVVVEGEQLGRTI 248

Query: 207 GFPTANMQLSPDI-LLKEGVYAIRFRTQDQT-------SYSGVANFGRNPTMVPNGPLLL 258
           GFPTAN++L  D  + ++GVYA+R +   ++          GV N G  PT+       +
Sbjct: 249 GFPTANLELPKDKFVPRQGVYAVRVKILGESADANIPLEILGVMNIGNRPTVN-GTYSSV 307

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E ++ D+S ++YG+   V   D+LRPE KF  +E LK  + +D   AR+IL 
Sbjct: 308 EVYLLDWSGDLYGKELAVQLVDFLRPEQKFPSLEALKAQIQQDCTVARQILS 359


>gi|294666945|ref|ZP_06732175.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603317|gb|EFF46738.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 340

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/313 (32%), Positives = 163/313 (52%), Gaps = 8/313 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++    L+    + + L   G  ++   +F    +   AE F++  LV  L  +
Sbjct: 60  REFFAPAALPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMCAEDFVRLALVGRLCAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  RAGD G+L+  GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRAGDIGLLRTLGEQHGFVAGEIAPVHLH-GERISATRIRELLGAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +  + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAERPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILESS 312
            D ++AR++L + 
Sbjct: 297 RDAEQAREVLAAD 309


>gi|229140450|ref|ZP_04269005.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST26]
 gi|229197919|ref|ZP_04324635.1| FMN adenylyltransferase [Bacillus cereus m1293]
 gi|228585637|gb|EEK43739.1| FMN adenylyltransferase [Bacillus cereus m1293]
 gi|228643011|gb|EEK99287.1| FMN adenylyltransferase [Bacillus cereus BDRD-ST26]
          Length = 335

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 162/328 (49%), Gaps = 15/328 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPLSERDRIICF 324
            + +D+K A++   +       + I+ F
Sbjct: 310 QIAKDKKTAQEYFANE------NNILAF 331


>gi|199597093|ref|ZP_03210525.1| FAD synthase [Lactobacillus rhamnosus HN001]
 gi|258508603|ref|YP_003171354.1| riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus GG]
 gi|199591897|gb|EDY99971.1| FAD synthase [Lactobacillus rhamnosus HN001]
 gi|257148530|emb|CAR87503.1| Riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus GG]
 gi|259649910|dbj|BAI42072.1| FAD synthase [Lactobacillus rhamnosus GG]
          Length = 315

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V       Q+     +  V+ +G FDG+H GH  +++  + + +    P+ V++F+ H
Sbjct: 1   MKVIDIQPPLQASAAPPQPIVLTLGFFDGVHRGHQAVIQAGKQVALEKKLPLAVMTFDMH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +    + I  LS    +  ++++ G   L    FT   A  S + F+   LV  L
Sbjct: 61  PAIVYRGVAKTAIRYLSTREEKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   V+ G  + +GK    +  +L +      F  V + +L  +  + +SS+ IR AL +
Sbjct: 120 KAAAVVAGFDYTYGKRAVANMALLPEYARGR-FEVVSVPKLAED-GKKISSTRIRDALDR 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HGE  GR LGFPT N+  L    L   G+YA+  +  D 
Sbjct: 178 GDIDTANELLGYVYLTTGKVVHGEARGRLLGFPTINLATLGQQRLPGIGIYAVTVKVDD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y G+A+ GRN T   +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L 
Sbjct: 237 TWYLGMASIGRNVTFGDDRAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALI 296

Query: 296 IYMGEDEKKARKILE 310
             +  DE+  R+   
Sbjct: 297 AQLKTDEQTVRQYFR 311


>gi|159036976|ref|YP_001536229.1| riboflavin biosynthesis protein RibF [Salinispora arenicola
           CNS-205]
 gi|157915811|gb|ABV97238.1| riboflavin biosynthesis protein RibF [Salinispora arenicola
           CNS-205]
          Length = 309

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +   +   + P      VV IG FDG+H GH   +  A+  A        V++F+PH
Sbjct: 1   MQRWRGYD---AAPGGWGRSVVTIGVFDGVHKGHQATIGHAVARAREIGVKSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+ P+ + +++E +G   L    FT E +   AE F+  VLVE L  
Sbjct: 58  PAEVVRPGSHPAVLTEPTRKAELIEALGVDVLCVLPFTPEFSRLPAEAFVHDVLVEHLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G  +G+       L      + SS+ IR+ +  G 
Sbjct: 118 ALVVVGENFRFGHRAAGDVALLERLGRTFGYAVEG-APLVAEAGTVFSSTYIRSCVAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-T 236
           V+ AA  LG    +E  V+ G++ GR LGFPTAN+       +  +GVYA R   + Q  
Sbjct: 177 VVAAARALGRPHRLEGVVVRGDQRGRELGFPTANLLCHRYAAVPADGVYAARLVRRGQRE 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                 + G NP+        +E+++ DF  ++YG+R  + F  +LR ++++  +E L  
Sbjct: 237 PLMAAVSIGTNPSF-SGRERRVEAYVLDFDADLYGERLALDFVAHLRGQVRYDSVEPLVA 295

Query: 297 YMGEDEKKARKIL 309
            + ED ++ R+ L
Sbjct: 296 QIAEDVERTRQAL 308


>gi|302522230|ref|ZP_07274572.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB78]
 gi|302431125|gb|EFL02941.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB78]
          Length = 320

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++  +G  AL+   FT E +  S   F + VL E L  
Sbjct: 58  PSEVVRPGSHPPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+  +L + G +  F    +D   +      Q  SS+  R  + 
Sbjct: 118 KVVVEGPNFRFGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA       
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVAG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R   KF  I++
Sbjct: 238 -EAMPAAISVGTNPQF-DAKHRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDE 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M +D K++R ++  
Sbjct: 296 LLTAMADDVKRSRALIAE 313


>gi|226313015|ref|YP_002772909.1| riboflavin biosynthesis protein RibC [Brevibacillus brevis NBRC
           100599]
 gi|226095963|dbj|BAH44405.1| riboflavin biosynthesis protein RibC [Brevibacillus brevis NBRC
           100599]
          Length = 313

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 162/313 (51%), Gaps = 10/313 (3%)

Query: 5   HNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPR 60
             I +    P+ L+     +A+G FDG+H+GH  ++++AI    AN    TV++F+PHPR
Sbjct: 2   KTIYLTYPFPSDLQANPCAIALGYFDGVHIGHRRVIQKAIDTAKANGWQSTVVTFDPHPR 61

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++  S     L+P + + +  EKMG       KF +  A    E FI + L+  LE + 
Sbjct: 62  EVLGQSGYTRYLTPLADKLEQFEKMGVDTTYVMKFDISFAAIYPEDFITECLLP-LECRH 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  + FG    G    LQ+  +   +    +  + N   + VSS+ IR  L  G V 
Sbjct: 121 IVVGFDYTFGYRGMGTAHTLQEMSKGR-YGLDIVGPV-NRLGEKVSSTIIREYLHHGDVE 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS 239
              HLLG  + +   V+HG+K GRT+GFPTAN+Q++ P ++ K GVY +RF   D+ SY 
Sbjct: 179 QVRHLLGRSYKVRGTVVHGDKRGRTIGFPTANVQVNQPYLIGKNGVYGVRFTV-DEQSYY 237

Query: 240 GVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           GV N G  PT         LE  IF+FS EIY +   V F  Y+R E KF  ++ L   +
Sbjct: 238 GVMNVGIKPTFELEKKEKSLEVHIFEFSGEIYDKEVEVEFLFYIREEQKFAGVDALIAQI 297

Query: 299 GEDEKKARKILES 311
           G D + A++    
Sbjct: 298 GRDVQTAKQKFAE 310


>gi|229092849|ref|ZP_04223983.1| FMN adenylyltransferase [Bacillus cereus Rock3-42]
 gi|228690471|gb|EEL44254.1| FMN adenylyltransferase [Bacillus cereus Rock3-42]
          Length = 335

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTYPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +      
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|299531571|ref|ZP_07044977.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Comamonas
           testosteroni S44]
 gi|298720534|gb|EFI61485.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Comamonas
           testosteroni S44]
          Length = 353

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 151/342 (44%), Gaps = 30/342 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +F  I    + P       V IGNFDG+H GH  +L   +A       P   ++F PH
Sbjct: 1   MKIFRGI----NHPGVAPACAVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE  G   ++   F    A+ S E FIQ VL+
Sbjct: 57  PRDYFAQKLGKPELAPARVGTLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLI 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  K V+ G  FRFG  RAGD  +L   G+  GF    ++    +    VSS+ +R A
Sbjct: 117 SGLGAKYVLVGDDFRFGSKRAGDYAMLDNAGQALGFDVARMNSYEVH-GLRVSSTAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L  G +  AA LLG+ + I   V+HG K+GR L         GF T N++         G
Sbjct: 176 LAAGDMQQAAKLLGHPYRISGHVVHGRKLGRKLAESMSGAEDGFRTLNLRFDHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++ PN    G +LLE+  FD+  ++     YG+   
Sbjct: 236 IFAVLVHGLTDKPLQGVANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           V     L  E+K+  ++ L + + +D   AR    S++  S 
Sbjct: 296 VELLHKLHDELKYDSLDALTVGIAKDCDDARAFFASAHIPSH 337


>gi|312958881|ref|ZP_07773400.1| riboflavin kinase/FAD synthetase [Pseudomonas fluorescens WH6]
 gi|311286651|gb|EFQ65213.1| riboflavin kinase/FAD synthetase [Pseudomonas fluorescens WH6]
          Length = 318

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 144/301 (47%), Gaps = 7/301 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 7   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L + G   ++   F     + SA +F+ ++LV+ L V
Sbjct: 64  PREYFAPETAPARLARLRDKLQLLAEEGVDRVLCLAFNQRLQSLSAAEFVDRILVDGLGV 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ  G   GF       +       VSS+ +R AL    
Sbjct: 124 QHLEVGDDFRFGCDRVGDFEFLQHAGIAQGFTVEAAQTV-ELDGLRVSSTQVRNALAAAD 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  S+
Sbjct: 183 FALAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI-DGQSW 241

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 242 PGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEALKTAI 301

Query: 299 G 299
            
Sbjct: 302 N 302


>gi|264676998|ref|YP_003276904.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni CNB-2]
 gi|262207510|gb|ACY31608.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni CNB-2]
          Length = 353

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 151/342 (44%), Gaps = 30/342 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +F  I    + P       V IGNFDG+H GH  +L   +A       P   ++F PH
Sbjct: 1   MKIFRGI----NHPGLAPACAVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE  G   ++   F    A+ S E FIQ VL+
Sbjct: 57  PRDYFAQKLGKPELAPARVGTLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLI 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  K V+ G  FRFG  RAGD  +L   G+  GF    ++    +    VSS+ +R A
Sbjct: 117 SGLGAKYVLVGDDFRFGSKRAGDYAMLDNAGQALGFDVARMNSYEVH-GLRVSSTAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L  G +  AA LLG+ + I   V+HG K+GR L         GF T N++         G
Sbjct: 176 LAAGDMQQAAKLLGHPYRISGHVVHGRKLGRKLAESMSGAEDGFRTLNLRFDHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++ PN    G +LLE+  FD+  ++     YG+   
Sbjct: 236 IFAVLVHGLTDKPLQGVANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           V     L  E+K+  ++ L + + +D   AR    S++  S 
Sbjct: 296 VELLHKLHDELKYDSLDALTVGIAKDCDDARAFFASAHIPSH 337


>gi|92118627|ref|YP_578356.1| riboflavin biosynthesis protein RibF [Nitrobacter hamburgensis X14]
 gi|91801521|gb|ABE63896.1| FMN adenylyltransferase [Nitrobacter hamburgensis X14]
          Length = 327

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 168/314 (53%), Gaps = 7/314 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRT 61
           F  I          KG VVA+GNFDG+HLGH  ++E A+    +   P   ++F PHPR 
Sbjct: 5   FTIIRDTTPAAAIPKGSVVAMGNFDGVHLGHRAVIEAALAMSRSRGKPAFAVTFEPHPRK 64

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
               ++P F L+  + + ++L   G +  +   F    A  +A+ FI   L+  L+V  +
Sbjct: 65  FFSPNTPQFRLTDETSKLRLLAGAGLAGAVVMTFDTARAGTTAQDFIHHDLIARLDVSGI 124

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  F FGK R G   +L     + G        + +   + VSSS IR AL +G + +
Sbjct: 125 AVGYDFHFGKGRVGSPSLLLSEATRLGIEVDVRPPV-DIDERPVSSSAIRMALAEGQIAD 183

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSY 238
           A  +LG  + +  +VIHGEK GR LG+PTAN++L  D  LK G+YA+R    + +D   +
Sbjct: 184 ATAMLGGPWFVTGEVIHGEKRGRHLGYPTANIRLDKDCGLKHGIYAVRVGLGQGKDHRRF 243

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+FGR PT   NG  LLE F+FDF  ++YG    V+F  ++R E+KF  I+ L   M
Sbjct: 244 DGVASFGRRPTF-DNGAPLLEVFLFDFKGDLYGTVLDVAFIGFIRDELKFDSIDALIRQM 302

Query: 299 GEDEKKARKILESS 312
            +D  +AR  L ++
Sbjct: 303 DDDSARARTQLAAA 316


>gi|254181496|ref|ZP_04888093.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1655]
 gi|184212034|gb|EDU09077.1| riboflavin biosynthesis protein RibF [Burkholderia pseudomallei
           1655]
          Length = 330

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAGD   L+  GE++ F    ++ L +     +SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGARRAGDFASLKAAGERFRFEVEQMETLADADGARISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAI 296

Query: 299 GEDEKKARKILES 311
            +D    R     
Sbjct: 297 AQDVVDTRAYFAE 309


>gi|294627039|ref|ZP_06705629.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598701|gb|EFF42848.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 340

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +F ++E     P   +G VV IG FDG+HLGH  +++ A+  A     P   +SF P P
Sbjct: 3   RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R     ++    L+    + + L   G  ++   +F    +   AE F++  LV  L  +
Sbjct: 60  REFFAPAALPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMCAEDFVRLALVGRLRAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +FRFG  RAGD G+L+  GE++GF    I  +  +  + +S++ IR  L  G  
Sbjct: 120 EVWIGPEFRFGHRRAGDIGLLRTLGEQHGFVAGEIAPVHLH-GERISATRIRELLGAGEF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +A  LLG  + I   V+ G+++GRTLG+PTAN++  P      G+YA       +  + 
Sbjct: 179 AHAGDLLGRPYAIGGRVVRGKQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAERPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M 
Sbjct: 238 SVSSFGTRPTVAGVEP-LLEAHLFDFQCDLYGRHIAVEFVAKLRDEEKFDGLEALTVQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR++L +
Sbjct: 297 RDAEQAREVLAA 308


>gi|301055299|ref|YP_003793510.1| riboflavin biosynthesis protein C, C-terminal part [Bacillus
           anthracis CI]
 gi|300377468|gb|ADK06372.1| riboflavin biosynthesis protein C, C-terminal part [Bacillus cereus
           biovar anthracis str. CI]
          Length = 335

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   +++ L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYIID-LNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +      
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|157692350|ref|YP_001486812.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pumilus SAFR-032]
 gi|157681108|gb|ABV62252.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pumilus SAFR-032]
          Length = 321

 Score =  310 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  +++ A  IA      + V++F+PH
Sbjct: 1   MKTIHISHPHTLNQKDQDPSVMALGYFDGVHLGHQKVIDAAKSIARKEGLALAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++Q +      ++P   +   +E++G   +   +F+   A  S ++F+ +  ++ L 
Sbjct: 61  PSHVLQKAREPKDLITPLEDKIDFIEQLGADYVYIVQFSESFAALSPQEFVDQY-LDELN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK  + G  F FG+  AG      + G+  G  T  I    +N+ + VSS+ IR+AL  G
Sbjct: 120 VKHAVAGFDFTFGRFGAGTMETFDEYGK--GRMTATIVPKLSNQDRKVSSTLIRSALKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
            V   + LLG  + +   VIHG+K GRT+GFPTAN+ LS   I+   GVYA+R   +   
Sbjct: 178 DVEYVSELLGKPYQLRGIVIHGDKRGRTIGFPTANVGLSAEYIIPPTGVYAVRAEVKG-K 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT     P    +E  +F F++EIYG+   + +F  +R E KF  I++L
Sbjct: 237 MYDGVCNVGYKPTFYEKRPDQPAIEVNLFGFNEEIYGEPIKLQWFKRIRSEQKFNGIQEL 296

Query: 295 KIYMGEDEKKARKILE 310
              +  D+++A +  +
Sbjct: 297 TAQISLDKEEAIQFFQ 312


>gi|332668406|ref|YP_004451194.1| riboflavin biosynthesis protein RibF [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332337220|gb|AEE54321.1| riboflavin biosynthesis protein RibF [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 664

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 169/314 (53%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V  ++     LP   K  VV IG+FDG+H GH  I+EQ  +I         V++F+PH
Sbjct: 1   MRVHRDLN---DLP-DFKNAVVTIGSFDGVHQGHQSIIEQVRQIALRYGGESVVITFHPH 56

Query: 59  PRT-IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR+ +    + +  ++    + ++ E+     L+   FT+E +  SA+++I+K LVE   
Sbjct: 57  PRSIVFPKDTSLRLITTTEEKIELFERYHIDHLVIVPFTVEFSQMSADEYIEKFLVEKFH 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G   RFG  R GD   L+   E++G+  V I+  R      VSS+ IR AL   
Sbjct: 117 PKCIVIGYDHRFGLSRQGDIHYLRWHCERFGYEVVEIEP-RQVDDMTVSSTKIRRALENC 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            V  AA L+G+ F +   V+ G++IGRTLGFPTAN++L+    ++  +G+YA++    + 
Sbjct: 176 EVKAAAQLMGHYFPLSGVVVKGQQIGRTLGFPTANIELNERFKLIPPDGIYAVKVSI-NA 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+   G  PT+       +E  IFDF+Q+IY Q+ T+   D++R + K+  +  L 
Sbjct: 235 QQYRGMLYMGTRPTLKQYHNRTIEVNIFDFNQDIYEQKITLELVDFIRHDQKYAQLSDLA 294

Query: 296 IYMGEDEKKARKIL 309
             + +D+    K+L
Sbjct: 295 KQLEQDKIAVEKVL 308


>gi|237713940|ref|ZP_04544421.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409152|ref|ZP_06085696.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_22]
 gi|294647477|ref|ZP_06725060.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CC 2a]
 gi|294806516|ref|ZP_06765356.1| riboflavin biosynthesis protein RibF [Bacteroides xylanisolvens SD
           CC 1b]
 gi|229446096|gb|EEO51887.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262352899|gb|EEZ01995.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_22]
 gi|292637187|gb|EFF55622.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CC 2a]
 gi|294446274|gb|EFG14901.1| riboflavin biosynthesis protein RibF [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 326

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 16/327 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +       P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDTSAINPKP-----SVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ ++     L+ P  + ++L  +G    +   FT E +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNTNYRPELLTTPEEKIRLLANIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +         E+ N  +  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAKAYTSNIEIENVPNVPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  L Y + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHQGEVDLAADCLKYEYFLDGIVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D+ +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+KF  
Sbjct: 235 VTFDKKTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILESSYPLSE 317
           I++L + + +D ++   IL +S   S 
Sbjct: 295 IDELIVQLHKDAEETEAILLASKANSN 321


>gi|163791143|ref|ZP_02185562.1| riboflavin biosynthesis protein RibF [Carnobacterium sp. AT7]
 gi|159873615|gb|EDP67700.1| riboflavin biosynthesis protein RibF [Carnobacterium sp. AT7]
          Length = 323

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 110/329 (33%), Positives = 170/329 (51%), Gaps = 15/329 (4%)

Query: 1   MHVF---HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSF 55
           M +    H  + N+ +P      V+A+G FDG+H GH  ++ +A  I   NN  + V++F
Sbjct: 1   MKIIKLRHPYQANE-IPED--EVVLALGFFDGVHRGHQEVIGRAKNIADKNNLKLAVMTF 57

Query: 56  NPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           N HP  + +   P     LS  S +E++++K+G   L    FT   A+ S + F+++ ++
Sbjct: 58  NQHPSIVFKKLDPDQHKYLSTVSRKEELMDKIGVDYLYEVDFTSAFASLSPQDFVEQYII 117

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  KTV+ G  + FGK        L        F  V +++ +  K + +SS+ IR A
Sbjct: 118 N-LHAKTVVAGFDYTFGKKEVASMEHLPMY-ANNRFDIVVVEK-QTLKEKKISSTRIRLA 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT 232
           L  G +  A  LLGY +     V+HG+  GR LGFPTAN+++   + L + GVYA+    
Sbjct: 175 LEIGDMAVANKLLGYTYATPGRVVHGDARGRLLGFPTANIEVENFVKLPRIGVYAVEILV 234

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             Q  Y G+A+ G N T  PN PL +E +I DFS +IYG+  TV + DYLR E KF  I+
Sbjct: 235 GGQV-YKGMASIGHNVTFEPNRPLTVEVYILDFSDDIYGEEVTVFWHDYLRGEEKFDSID 293

Query: 293 KLKIYMGEDEKKARKILESSYPLSERDRI 321
            L   + +DE       E     ++ D +
Sbjct: 294 ALIAQLKQDELDTVHFFEKKDYSTQVDEL 322


>gi|65321136|ref|ZP_00394095.1| COG0196: FAD synthase [Bacillus anthracis str. A2012]
 gi|118479029|ref|YP_896180.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           thuringiensis str. Al Hakam]
 gi|228916446|ref|ZP_04080012.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928857|ref|ZP_04091889.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935123|ref|ZP_04097950.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228947528|ref|ZP_04109818.1| FMN adenylyltransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123322|ref|ZP_04252526.1| FMN adenylyltransferase [Bacillus cereus 95/8201]
 gi|229186046|ref|ZP_04313216.1| FMN adenylyltransferase [Bacillus cereus BGSC 6E1]
 gi|118418254|gb|ABK86673.1| FMN adenylyltransferase / riboflavin kinase [Bacillus thuringiensis
           str. Al Hakam]
 gi|228597465|gb|EEK55115.1| FMN adenylyltransferase [Bacillus cereus BGSC 6E1]
 gi|228660098|gb|EEL15734.1| FMN adenylyltransferase [Bacillus cereus 95/8201]
 gi|228812048|gb|EEM58379.1| FMN adenylyltransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824488|gb|EEM70293.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830664|gb|EEM76269.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843025|gb|EEM88107.1| FMN adenylyltransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 335

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADEKGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +      
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHG-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+ +IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNNDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|239917234|ref|YP_002956792.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
 gi|281414291|ref|ZP_06246033.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
 gi|239838441|gb|ACS30238.1| FMN adenylyltransferase /riboflavin kinase [Micrococcus luteus NCTC
           2665]
          Length = 325

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/325 (30%), Positives = 162/325 (49%), Gaps = 17/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+++++    +P  L   VV +GNFDG+H GH  +L + +++A         ++F PH
Sbjct: 1   MRVWNSLD---EVPTDLPRTVVTLGNFDGVHRGHREVLRRVVELARARGALAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q   P   +  P  +  +LE+ G  A++  ++TLE A+ S E+F++ +LV  L  
Sbjct: 58  PRAVHQPEVPHVDIISPEQRVVLLEEAGLDAVLLQRYTLEFADQSPEEFVRGMLVHGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS----QIVSSSNIRTAL 174
             V+ G   RFG+   GD   + + G  YGF    ++E          +  SS+ +R AL
Sbjct: 118 AVVVVGHDVRFGRGNTGDVAEMVRLGAHYGFEVEAVEEFPAEHGAEPERRCSSTWVREAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQ 233
             G V  AA +LG    +  +V+HG   GR LGFPTAN++     ++  +GVYA      
Sbjct: 178 DAGDVAQAAAVLGRHHVLTGEVVHGFARGRELGFPTANLETDVQGMIPADGVYAGWVHDA 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIK 287
               +    + G NPT       ++E+ + D         ++YGQ   V F   LR  + 
Sbjct: 238 HGGVWPAAISIGSNPTFEDVS-RVVEAHVIDRHDERVEDFDLYGQHIEVEFVARLRGMVA 296

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           ++ +EKL   + +D  +AR IL ++
Sbjct: 297 YEGVEKLVAQITQDVDEARAILATT 321


>gi|288929726|ref|ZP_06423569.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288328827|gb|EFC67415.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 304

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 7/301 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS 73
           +    V  IG FDG+HLGH  ++    ++A     P  V++F  HPR ++Q+S     LS
Sbjct: 5   NTPPCVATIGFFDGVHLGHRYLISHVRQLAQGQGMPSMVVTFGTHPRQVVQTSFVPKLLS 64

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  ++K+L + G    +   F    A  +A +F+Q+VL E L V  ++ G   +FG +R
Sbjct: 65  TPEEKQKLLCETGIDHTMVLNFDQNMATLTAREFMQRVLKERLNVGQLVIGYDNKFGHNR 124

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                   + GE  G   V   +   +    VSSS IRT L +G V  A  LLGY +++ 
Sbjct: 125 EEGFEDYCRYGEMLGIQVVEAPQFEPD-GVHVSSSAIRTHLLEGRVKQANALLGYAYSLG 183

Query: 194 SDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTM 250
             V+ G + GR +GFPTAN+ +     +L + GVYA     +       G+ N G  PT 
Sbjct: 184 GKVVPGFQEGRKMGFPTANLLVENPQKLLPQNGVYATWVEVEGHEHPLMGMTNIGNRPTF 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              G + +E+ I DFS +IYGQ   ++F D +R E+KF  I++LK  M EDE+ AR++++
Sbjct: 244 NGKG-VTIETNILDFSADIYGQNMRIAFVDRIRAEVKFDTIDQLKAKMKEDEEVARRLVQ 302

Query: 311 S 311
           +
Sbjct: 303 N 303


>gi|25028427|ref|NP_738481.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium efficiens YS-314]
 gi|259507485|ref|ZP_05750385.1| riboflavin biosynthesis protein RibF [Corynebacterium efficiens
           YS-314]
 gi|23493712|dbj|BAC18681.1| riboflavin kinase/FMN adenylyltransferase [Corynebacterium
           efficiens YS-314]
 gi|259164973|gb|EEW49527.1| riboflavin biosynthesis protein RibF [Corynebacterium efficiens
           YS-314]
          Length = 341

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/344 (28%), Positives = 164/344 (47%), Gaps = 34/344 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++  ++    +P  L+G VV IG FDG+H GH  ++ +A + A     P  +++F+PH
Sbjct: 1   MDIWRGLK---EVPADLEGSVVTIGVFDGVHRGHQTLMREASRQARELGVPCVMVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++         L+P   +  +  + G  A++   FT E A  S E++ + ++V+ L  
Sbjct: 58  PISVFLPGRQPTRLAPLDYRITLAAEQGVEAVLIIDFTRELAGLSPEEYFRVMIVDALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++V+ G  F FG D AG    +++ G ++    + I  L ++    + S+ +R  L +G 
Sbjct: 118 RSVVVGENFTFGTDGAGTEATMRELGAQHDVD-ITIMPLLHDDDLCICSTLVREFLVEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  A   LG R+++  +V+ G   G   LG+PTAN+ L   + L  +GVYA  F   D  
Sbjct: 177 VARANWALGRRYSVRGEVVRGAGRGGKELGYPTANLYLPESVALPADGVYAGWFTITDDR 236

Query: 237 ------------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
                              Y    + G NPT   +    +E+F+ D   ++YG    V F
Sbjct: 237 AIDREISRDIDGDMVPGVRYPTAVSVGTNPTF-GDERRSVEAFVLDREADLYGHHVMVEF 295

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRII 322
            D LRP +KF  +E+L   M  D  + R+IL        RDR +
Sbjct: 296 VDRLRPMVKFHGVEELLEAMANDVTQTREILA-------RDREL 332


>gi|241759892|ref|ZP_04757992.1| riboflavin biosynthesis protein RibF [Neisseria flavescens SK114]
 gi|241319900|gb|EER56296.1| riboflavin biosynthesis protein RibF [Neisseria flavescens SK114]
          Length = 335

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 18/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M+++      +  P   +G  V IGNFDG+HLGH  IL++  +       P+ V+ F P 
Sbjct: 28  MNIWLG---QRHAPKFPQGAAVTIGNFDGVHLGHKHILQKLKREADQRGLPVVVVVFEPQ 84

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P+            + +SP   + ++L + G   A+   +F    ++ SA+ FI ++L +
Sbjct: 85  PKEFFARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFNQAFSDMSAQAFIDQLLRQ 144

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRT 172
            L  + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R 
Sbjct: 145 TLNTRYLLIGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQ 198

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+ G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +    
Sbjct: 199 ALSDGRLEYAKKLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVEADG 258

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T   GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE
Sbjct: 259 TFGTR-RGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIE 317

Query: 293 KLKIYMGEDEKKARKI 308
            LK  + +D + AR  
Sbjct: 318 ALKTQILQDMEDARVW 333


>gi|83719780|ref|YP_441327.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis E264]
 gi|83653605|gb|ABC37668.1| riboflavin biosynthesis protein RibF [Burkholderia thailandensis
           E264]
          Length = 345

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 4/309 (1%)

Query: 7   IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           +++ + LPN        + IGNFDG+H GH  +L +    A+    P+ V++F PHPR  
Sbjct: 16  VKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF 75

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
              +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  + ++
Sbjct: 76  FNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVERTLVHGLHTRWIM 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F +G  RAGD   L+  GE++GF    ++ L +      SSS +R AL  G +  A
Sbjct: 136 VGDDFCYGAKRAGDFASLKAAGERFGFEVEQMETLADADGARFSSSGVRAALAAGDLDAA 195

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           A  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R          GVA
Sbjct: 196 ARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGIGPEPLPGVA 255

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           + G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   + +D 
Sbjct: 256 SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDV 315

Query: 303 KKARKILES 311
              R     
Sbjct: 316 VDTRAYFAE 324


>gi|226226965|ref|YP_002761071.1| riboflavin kinase/FMN adenylyltransferase [Gemmatimonas aurantiaca
           T-27]
 gi|226090156|dbj|BAH38601.1| riboflavin kinase/FMN adenylyltransferase [Gemmatimonas aurantiaca
           T-27]
          Length = 326

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 97/305 (31%), Positives = 161/305 (52%), Gaps = 6/305 (1%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSS 66
           +++ LP    G VV +G FDG+HLGHH +L + ++       P  V++F+PHP  ++  +
Sbjct: 5   LDRGLPLPAGGAVVTVGTFDGVHLGHHDVLARLVEHAKVRGLPSVVVTFDPHPLEVVNPA 64

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    L+    + ++    G S ++   FT   A + A  F+  VL +   V  ++ G  
Sbjct: 65  AAPPLLTLHHEKLELFALSGVSYVVVLPFTTTLAGFDAAYFVDHVLRDQFAVSELLVGHD 124

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             FG+ R GD G+L+  G++ GF    +  +       +SS+ IR A++ G +  AA  L
Sbjct: 125 HGFGRGRMGDIGMLRTLGQERGFDVTVLAPVHTADGMTISSTVIRQAISDGDLNRAAAGL 184

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           G R+++   V+ G++ GRTLGFPT N+       +L  +GVYA+R +   Q ++ G+ N 
Sbjct: 185 GRRYSVSGVVVRGDQRGRTLGFPTLNLGPVSERKLLPPDGVYAVRVQLP-QGTFGGMLNL 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT   +G   +E+ +FD S + YG    + F  YLR    F  IE L+  + +DE++
Sbjct: 244 GPRPTFGDHG-RRIETHVFDASHDWYGAPVRLDFVRYLRGTRPFPGIEALRAQLADDEQQ 302

Query: 305 ARKIL 309
           AR  L
Sbjct: 303 ARDAL 307


>gi|317125346|ref|YP_004099458.1| riboflavin kinase; FMN adenylyltransferase [Intrasporangium calvum
           DSM 43043]
 gi|315589434|gb|ADU48731.1| riboflavin kinase; FMN adenylyltransferase [Intrasporangium calvum
           DSM 43043]
          Length = 323

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 16/326 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  ++ +E    +P+ L   VV +GNFDG+H GH  +L + ++ A         ++F PH
Sbjct: 1   MQRWYALE---DIPSDLGPTVVTLGNFDGVHRGHREVLGRVVREARERGATPVAVTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++        +     +   LE +G  A++   FT E A  + E+F+++  V+ L  
Sbjct: 58  PVTVLHPERAPAMVMSVEQRLDALESVGLGAVLVLNFTREFAQQTPEEFVERTFVDGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN--NKSQIVSSSNIRTALTK 176
             V+ G   RFG   +GD G L + GEK+GF  + +D++    ++ +  SS+ +R  +  
Sbjct: 118 VAVVVGRDTRFGVRNSGDVGTLTELGEKHGFEVIALDDIGEASHEGRRWSSTQLRAEILD 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD- 234
           G V +A+ +LG    +   V+HG+  GR LGFPTAN+    + ++  +GVYA      D 
Sbjct: 178 GKVSHASEILGRPHRVTGTVVHGDHRGRELGFPTANLSQDHEGLVPSDGVYAGWLIRLDL 237

Query: 235 -----QTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKF 288
                  +     + G NPT        +E+++ D    ++YG+R  V F  +LRP ++F
Sbjct: 238 DTGAVDRTLPAAISVGTNPTF-DGHQRRVEAYVLDRTDLDLYGERVAVDFVSHLRPTLRF 296

Query: 289 KDIEKLKIYMGEDEKKARKILESSYP 314
             IE L   M ED  + R+IL +  P
Sbjct: 297 DSIEGLVTQMREDVARCREILSAIVP 322


>gi|229031439|ref|ZP_04187439.1| FMN adenylyltransferase [Bacillus cereus AH1271]
 gi|228729728|gb|EEL80708.1| FMN adenylyltransferase [Bacillus cereus AH1271]
          Length = 335

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A    +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVENLGIDILYVIKFDESFAGLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +      
Sbjct: 191 MEQIPSILGRAYTVGGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLKVHG-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVE 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKTAQEYFANEKNI 328


>gi|125973502|ref|YP_001037412.1| riboflavin kinase / FMN adenylyltransferase [Clostridium
           thermocellum ATCC 27405]
 gi|256003320|ref|ZP_05428311.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           2360]
 gi|281417705|ref|ZP_06248725.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum
           JW20]
 gi|125713727|gb|ABN52219.1| FMN adenylyltransferase [Clostridium thermocellum ATCC 27405]
 gi|255992610|gb|EEU02701.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           2360]
 gi|281409107|gb|EFB39365.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum
           JW20]
 gi|316940259|gb|ADU74293.1| riboflavin biosynthesis protein RibF [Clostridium thermocellum DSM
           1313]
          Length = 312

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 8/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V +  E N +     +   V +GNFDG+H+GH  ++++ IK +  N+    V +F+ H
Sbjct: 1   MRVIYGAESNYNF---TRSTGVGLGNFDGLHVGHMALIDKLIKESESNSLDSVVYTFSKH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  II+       ++    + ++LEK     L   KF    +    E F++ +LVE L +
Sbjct: 58  PENIIRKELFTPLITSTRKKVELLEKTRLDYLYFEKFDETFSRMRPEDFVKDILVERLNM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  + G  +RFG    GD  +L+K G KYGF  + I+ +       VSS+ IR  + +G 
Sbjct: 118 KLAVAGFNYRFGYRGMGDTELLRKLGRKYGFRVIVIEPVMLGDEV-VSSTKIRNYILEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS 237
           +      LG  +++   V  G ++G T+GFPTAN+     ++L   GVY  R    D   
Sbjct: 177 MERVFAFLGRHYSVAGKVEKGRRVGNTIGFPTANIYPEDYLVLPCHGVYITRTLV-DGKM 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N G NPT      + +E++IFDF ++IYG+   V F   +R E++F  +E+L   
Sbjct: 236 YHSITNVGNNPTFGGVDRISVETYIFDFEKDIYGKEIEVFFISKIREEMRFGSVEELIEQ 295

Query: 298 MGEDEKKARKILESS 312
           + +D + A+K+L   
Sbjct: 296 IHKDIEIAKKVLAED 310


>gi|325281018|ref|YP_004253560.1| riboflavin biosynthesis protein RibF [Odoribacter splanchnicus DSM
           20712]
 gi|324312827|gb|ADY33380.1| riboflavin biosynthesis protein RibF [Odoribacter splanchnicus DSM
           20712]
          Length = 309

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 166/316 (52%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M + +  E  Q +       VV IG+FDG+H GH  ++E   ++A N      ++SF PH
Sbjct: 1   MQIHYGTENLQIVNP-----VVTIGSFDGVHKGHVQVIESLKRVARNLKGETVIISFEPH 55

Query: 59  PRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++         L+    +  IL   G   L+  +FT   A      F++ +LV+ + 
Sbjct: 56  PREVLYPMEKRPGILTTLEEKAAILATYGVEHLVVLQFTRSLAELEYADFVRHILVDKIG 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K ++ G   RFGK+R G    L++  ++Y F+    +E+       +SS+ IR AL  G
Sbjct: 116 LKGLVVGYDHRFGKNREGTFEKLKELADRYHFYLEQ-EEVYEENQINISSTKIRNALQIG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQ 235
            +      LGY +++   V+ G+KIGR++GFPTAN++L+ D  +L   GVYA++ + + Q
Sbjct: 175 DIDRVNEFLGYTYSVSGKVVAGDKIGRSMGFPTANIRLNDDRKLLPAAGVYAVKVKVEGQ 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ N G  PT+  +G + +E  IFDF  +IYG+   +     +R E KF  I++L 
Sbjct: 235 E-YRGMLNIGVRPTVSCSGVVRIEVNIFDFDADIYGKEIRLLLIARIRGERKFNGIDELS 293

Query: 296 IYMGEDEKKARKILES 311
             + +D ++   +L+ 
Sbjct: 294 EQLKKDRQEVSVLLQQ 309


>gi|289662724|ref|ZP_06484305.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 333

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 8/318 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           +F ++E     P+   G VV IG FDG+HLGH  +++ A+  A     P   +SF P PR
Sbjct: 4   LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHRTLVQHAVARARALGVPAVAVSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                ++P   L+    + + L   G  ++   +F    +  SAE F++  LV  L  + 
Sbjct: 61  EFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMSAEDFVRLALVGRLCARE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G +FRFG  R GD  +L   GE++GF    I  +  +  + +S++ IR  L  G   
Sbjct: 121 VWIGPEFRFGHRRGGDIRLLHMLGEQHGFVAGEIAPVHLH-GERISATRIRELLVAGEFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LLG  + I   V+ G+++GR+LG+PTAN++  P      G+YA       +T +  
Sbjct: 180 HAGDLLGRPYAIGGRVVRGKQLGRSLGYPTANLRF-PRTPALSGIYATWVHGVAKTPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L + M  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMHR 297

Query: 301 DEKKARKILESSYPLSER 318
           D  +AR++L +     ++
Sbjct: 298 DAGQAREVLAAQANSQQQ 315


>gi|293374235|ref|ZP_06620563.1| riboflavin biosynthesis protein RibF [Turicibacter sanguinis PC909]
 gi|292647068|gb|EFF65050.1| riboflavin biosynthesis protein RibF [Turicibacter sanguinis PC909]
          Length = 305

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 176/313 (56%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V   + +NQ+  N  +G  VA+G FDG+H+GH L++++AI+    N     V++F+P+
Sbjct: 1   MKV---LNLNQTSFNSEEGLSVALGYFDGLHIGHQLVIKEAIEYAKKNGLKSAVMTFSPN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++  S    ++PP+ + ++L ++G   L+   F  E A+  A  FI++ LV  ++V
Sbjct: 58  PNVILKKLSSEHLITPPTEKVRLLTELGVDYLMILTFNEELASLRAIDFIERYLV-KMKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V TG  FRFGK   G   +L++  EK+  +     E+   + + + ++ I++ L  G+
Sbjct: 117 EHVSTGFDFRFGKKGEGSVELLRQYPEKFSLNVTDKKEI---EGEKIGATEIKSYLAVGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A  +LG  +T+   VI G++ GR +GFPTAN+  +   I+ K GVYA+R   + Q S
Sbjct: 174 IEKANEMLGRPYTLCGTVISGQQKGRQIGFPTANVATTEAYIIPKNGVYAVRVWVKGQ-S 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G+ N G NPT      + +E  I DF+Q+IYGQ   V F+  LR E +F  IE L   
Sbjct: 233 YAGMCNIGHNPTFNFIDNVSVEVHILDFNQDIYGQEMKVEFYHRLRDEERFSSIEALMTQ 292

Query: 298 MGEDEKKARKILE 310
           +  D K  R   +
Sbjct: 293 LNHDRKTVRGYFK 305


>gi|78212441|ref|YP_381220.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus sp.
           CC9605]
 gi|78196900|gb|ABB34665.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9605]
          Length = 313

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 5/297 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   +A+G+FDG+H GH  ++ +AI+    ++  +V+SF PHPR ++   + +  L  PS
Sbjct: 12  RPTALALGSFDGLHAGHRRVIAEAIQGSPEDAVASVVSFWPHPREVLFGEARL-RLDLPS 70

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +LE +G   L+   FT E A  SAE F+  VL+  L+ + +  GT FRFG  R GD
Sbjct: 71  EKLALLEPLGIQQLVLVPFTRELAQLSAEDFVTSVLLNTLQARRIAVGTNFRFGHQRRGD 130

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++   +       +  + + + ++ SSS IR AL +  +  A  LLG  +  +  V
Sbjct: 131 AEMLERLAARSCVEVKVVPIVEDGEGRM-SSSRIRAALDQADLATAKALLGRAYRFQGRV 189

Query: 197 IHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNG 254
           + G  +G  LG+PTAN+Q+     L   GVYA   +   D      V N G  PT+ P  
Sbjct: 190 VRGRGLGHELGWPTANLQVDGRKALPGLGVYAAWAQLDGDGDQLPAVMNLGPQPTIDPTS 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P  +E  + D S E+ G++  V     LR + KF  +E+L   +G D  +AR+IL++
Sbjct: 250 PSAVEVHLLDQSLELEGRQLGVEPVQRLRGQTKFSGLEELSSQIGRDAAQAREILQT 306


>gi|167901639|ref|ZP_02488844.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia pseudomallei NCTC 13177]
          Length = 330

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAGD   L+  GE++GF    ++ L +     +SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +R         
Sbjct: 177 LDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + Y +   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYSKLVRVEFLKKLRDEAKFVDLETLSRAI 296

Query: 299 GEDEKKARKILES 311
            +D    R     
Sbjct: 297 AQDVVDTRAYFAE 309


>gi|229552411|ref|ZP_04441136.1| FAD synthetase [Lactobacillus rhamnosus LMS2-1]
 gi|229314237|gb|EEN80210.1| FAD synthetase [Lactobacillus rhamnosus LMS2-1]
          Length = 315

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V       Q+     +  V+ +G FDG+H GH  +++  + + +A   P+ V++F+ H
Sbjct: 1   MKVIDIQPPLQASAAPPQPIVLTLGFFDGVHRGHQAVIQAGKRVALAKKLPLAVMTFDMH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +    + I  LS    +  ++++ G   L    FT   A  S + F+   LV  L
Sbjct: 61  PAIVYRGVAKTAIRYLSTREEKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   V+ G  + +GK    +  +L +      F  V + +L  +  + +SS+ IR AL +
Sbjct: 120 KAAAVVAGFDYTYGKRAVANMALLPEYARGR-FEVVSVPKLAED-GKKISSTRIRDALDR 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HGE  GR LGFPT N+  L    L   G+YA+  +  D 
Sbjct: 178 GDIDTANELLGYVYLTTGKVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKVDD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y G+A+ GRN T   +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L 
Sbjct: 237 TWYLGMASIGRNVTFGDDRAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALI 296

Query: 296 IYMGEDEKKARKILE 310
             +  DE+  R+   
Sbjct: 297 AQLKTDEQTVRQYFR 311


>gi|138894787|ref|YP_001125240.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266300|gb|ABO66495.1| Riboflavin kinase [Geobacillus thermodenitrificans NG80-2]
          Length = 326

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 12/327 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M        +      L   V+A+G FDGIHLGH  ++  A++IA        V++F+PH
Sbjct: 1   METIFISHPHHFERQALPPTVMALGYFDGIHLGHQKVIATAVEIAKQRGYESAVMTFHPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     +  ++P   +E+++  +G + L   +FT   A    EQF+ +  ++   V
Sbjct: 61  PSVVLGKQPELRLITPLGKKEQLIAALGVNRLYIVEFTPAFAGLLPEQFVDQY-LDEFHV 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F +G+   G    +     +  F    I +      + VSS+ +R  + +G 
Sbjct: 120 KHIVAGFDFTYGRFGKGTMETMP-LHARGRFEQTIIPK-MTVGGEKVSSTRVRKLIEEGA 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V     LLG  + IE  V+ GE+ GRT+GFPTAN+ L+   +L   GVYA++     Q  
Sbjct: 178 VEQLPRLLGRFYDIEGTVVTGERRGRTIGFPTANIALNGDYLLPAIGVYAVKATIGGQV- 236

Query: 238 YSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           Y GVAN G  PT          +E  +F+F+++IYG+  T+ +   LR E KF  + +L 
Sbjct: 237 YEGVANIGYKPTFHETREGLPSIEVHLFEFARDIYGETVTIEWHRRLRGEQKFASVAELT 296

Query: 296 IYMGEDEKKARKILESSYPLSERDRII 322
             +  D+++A+K     + L E+  I+
Sbjct: 297 AQIARDKEEAKKYF---HSLGEKTCIL 320


>gi|33151512|ref|NP_872865.1| riboflavin biosynthesis protein RibF [Haemophilus ducreyi 35000HP]
 gi|33147732|gb|AAP95254.1| riboflavin biosynthesis protein RibF [Haemophilus ducreyi 35000HP]
          Length = 326

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 105/322 (32%), Positives = 158/322 (49%), Gaps = 16/322 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +        +     KG V+ IGNFDG+H+GH  IL +    +     P  V+ F P 
Sbjct: 1   MQLIRGFHNLANYDALKKGCVLTIGNFDGVHIGHQNILARLCDQSLAIGLPSVVMLFEPQ 60

Query: 59  PRTIIQSSSP-----------IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQF 107
           PR     +S               L     + K L +MG   ++   F  + A YSAE F
Sbjct: 61  PREFFAKNSQNQTASALSNAVPARLMRLRDKLKYLAEMGVDFVLCVNFNQKFAKYSAEDF 120

Query: 108 IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSS 167
           I ++LV+ L+V+ +  G  FRFG +R G+  +L+  G  + F        R   +  +SS
Sbjct: 121 ITELLVKKLKVRYLSVGDDFRFGIERRGNFEMLRNAGLTHRFAVEESHTHR-FDTLRISS 179

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA 227
           S IR AL +  +    +LLG  ++I   V HG K+GRT+GFPTAN+ L+  +   +GV+ 
Sbjct: 180 SLIRQALQQNDLALVENLLGKPYSIRGRVAHGNKLGRTIGFPTANIMLNRLVTPIQGVFI 239

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           +  +T     ++G+AN G  PT+    P LLE  IFDF+  IY Q   V F   +R E+K
Sbjct: 240 VEVQTI-YGRFNGIANVGNRPTINGTKP-LLEVHIFDFNNAIYHQIIEVIFIKKIRDELK 297

Query: 288 FKDIEKLKIYMGEDEKKARKIL 309
           F     LK  + +D ++A +  
Sbjct: 298 FASFTLLKEQIEKDCQQAVEFF 319


>gi|329944615|ref|ZP_08292755.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328530168|gb|EGF57051.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 341

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 18/331 (5%)

Query: 1   MHVFHNIE---INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN------SPIT 51
           M V++  E    + S P+   G VV +G FDG+H GH  +L + +++A+        P+ 
Sbjct: 1   MEVWYGAEQVPASLSAPDG-PGAVVTMGIFDGVHRGHQAVLGRVVELADELARGGERPLA 59

Query: 52  V-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           V ++F+PHPR++ Q  + +  ++  + +   L+ +G  A++   +TLE A  S + F++ 
Sbjct: 60  VAVTFDPHPRSVHQPEADLPLITSLTDRLASLKDLGLDAVLVITYTLEFATQSPQDFVRT 119

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            L   L  + V+ G   RFG   +GD   L++ G   GF    + ++R+ + +  SS+ I
Sbjct: 120 WLEGLLGARAVVVGDDVRFGCRNSGDAATLEEIGRADGFAVEIVSKIRSEEGRRWSSTWI 179

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIR 229
           R  L +G++  A  +LG    +   V+ G + GR LGFPTAN++ +   ++  +GVYA  
Sbjct: 180 RQCLKEGNMGQARQVLGRPHRLRGVVVRGLRRGRELGFPTANLEAATAGVVPPDGVYAGW 239

Query: 230 FR-----TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLR 283
                             + G NPT        +E+ +       +YG+   +   + LR
Sbjct: 240 LVRGGGADGGGQRLPAAISIGTNPTFDDVPRRTVEAHVLGRADLNLYGEEIGIELVERLR 299

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           P + F  ++ L + M  D +   +ILE   P
Sbjct: 300 PMLAFDGLDPLLVQMRADIEDTARILEVPVP 330


>gi|196247589|ref|ZP_03146291.1| riboflavin biosynthesis protein RibF [Geobacillus sp. G11MC16]
 gi|196212373|gb|EDY07130.1| riboflavin biosynthesis protein RibF [Geobacillus sp. G11MC16]
          Length = 328

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 12/327 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M        +      L   V+A+G FDGIHLGH  ++  A++IA        V++F+PH
Sbjct: 3   METIFISHPHHFERQALPPTVMALGYFDGIHLGHQKVIATAVEIAKQRGYESAVMTFHPH 62

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     +  ++P   +E+++  +G + L   +FT   A    EQF+ +  ++   V
Sbjct: 63  PSVVLGKQPELRLITPLGKKEQLIAALGVNRLYIVEFTPAFAGLLPEQFVDQY-LDEFHV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F +G+   G    +     +  F    I ++  +  + VSS+ +R  + +G 
Sbjct: 122 KHIVAGFDFTYGRFGKGTMETMP-LHARGRFEQTIIPKMTVD-GEKVSSTRVRKLIEEGA 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V     LLG  + IE  V+ GE+ GRT+GFPTAN+ L+   +L   GVYA++     Q  
Sbjct: 180 VEQLPRLLGRFYDIEGTVVTGERRGRTIGFPTANIALNGDYLLPAIGVYAVKATIGGQV- 238

Query: 238 YSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           Y GVAN G  PT          +E  +F+F+++IYG+  T+ +   LR E KF  + +L 
Sbjct: 239 YEGVANIGYKPTFHETREGLPSIEVHLFEFARDIYGETVTIEWHRRLRGEQKFASVAELT 298

Query: 296 IYMGEDEKKARKILESSYPLSERDRII 322
             +  D+++A+K     + L E+  I+
Sbjct: 299 AQIARDKEEAKKYF---HSLGEKTCIL 322


>gi|167561856|ref|ZP_02354772.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia oklahomensis EO147]
          Length = 330

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S E F++  LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVEHTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGAKRAGNFASLKAAGERHGFEVEQMETLADADGARISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +          
Sbjct: 177 LDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARAI 296

Query: 299 GEDEKKARKILES 311
            +D    R    +
Sbjct: 297 AQDVVDTRAYFAA 309


>gi|159896778|ref|YP_001543025.1| riboflavin biosynthesis protein RibF [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159889817|gb|ABX02897.1| riboflavin biosynthesis protein RibF [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 314

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/298 (33%), Positives = 162/298 (54%), Gaps = 7/298 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             ++ IG FDG+H  H  +L + ++ A   N    VL+F+PHP  I++    I  L+  +
Sbjct: 20  PTLLTIGKFDGVHQAHQQLLRRLVERARQHNCHSAVLTFDPHPDEILRPEREIRYLTTIN 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +++++G   L    FT  T+  S + F+ ++L+  + V+ +  G  F+ G    G 
Sbjct: 80  ERAALMQELGIDLLAVLPFTHATSQLSPKAFL-QLLLNHVPVRELWVGPDFKLGHRGTGT 138

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ G++ GF    I        +IVSS+ IRT+L  G V  A H LG  F+++  V
Sbjct: 139 IPVLQEFGQELGFTVEPI-PYWTLDGEIVSSTAIRTSLAAGDVQTANHYLGRAFSLQGTV 197

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNG 254
           I G++ GR +GFPTAN+Q+ S   L  +GVY  + +  D    +  V N G  PT    G
Sbjct: 198 IPGDQRGRKIGFPTANVQIASNHTLPADGVYVCKVQLLDDRRSFGAVTNIGVRPTFGVLG 257

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              +E+ +FDF+++IYG+   VSF  ++R E KF  IE+L   +G D + AR+ L ++
Sbjct: 258 -RAVEAHLFDFNEDIYGRPLRVSFLQHIRGEQKFAGIEQLVAQIGRDAQFAREWLANA 314


>gi|75908339|ref|YP_322635.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Anabaena
           variabilis ATCC 29413]
 gi|75702064|gb|ABA21740.1| FMN adenylyltransferase / riboflavin kinase [Anabaena variabilis
           ATCC 29413]
          Length = 352

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 49/351 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP----------------- 49
           + +  +    L    VA+G FDG+HLGH  +++  ++   ++                  
Sbjct: 1   MWVASTTEMVLTPTAVALGKFDGVHLGHQRVIQPVLQSTRSAQTWGDALDSSAQSANPPA 60

Query: 50  -------ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY 102
                   TV++F PHP+           L+P   + + L  +G   L+   F  E    
Sbjct: 61  APQERIYSTVVTFRPHPQEFFTG-QARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTAL 119

Query: 103 SAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID------- 155
           S E+F++K+LV+ L  + +  G  F FGK R G    LQ    KY      +        
Sbjct: 120 SPEEFVEKILVQQLRCQRISVGQDFCFGKQRRGTARDLQLIAAKYHIPVSIVPLQTSDGQ 179

Query: 156 --------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
                      + +   +S+S IR AL  G +  A   LG  + +   V+ GE++GRT+G
Sbjct: 180 FLEDGNCGSFESLEYAPISTSLIRQALETGDIKTANQFLGRPYILMGVVVEGEQLGRTIG 239

Query: 208 FPTANMQLSPDI-LLKEGVYAIRFRTQD-------QTSYSGVANFGRNPTMVPNGPLLLE 259
           FPTAN++L  D  + ++GVYA+R +               GV N G  PT+       +E
Sbjct: 240 FPTANLELPKDKFIPRQGVYAVRVKILGESADANVPPEILGVMNIGNRPTVN-GTYSSVE 298

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             + D+S ++YG+   V   D+LRPE KF  +E LK  + +D   AR+IL 
Sbjct: 299 VHLLDWSGDLYGKEIVVQLVDFLRPEQKFPSLEALKAQIQQDSTVARQILS 349


>gi|167569078|ref|ZP_02361952.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia oklahomensis C6786]
          Length = 330

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L + G   ++   F    A+ S E F++  LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPETFVEHTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL  G 
Sbjct: 117 RWIMVGDDFCYGAKRAGNFASLKAAGERHGFEVEQMETLADADGARISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ +          
Sbjct: 177 LDAAARALGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIGPEPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   +
Sbjct: 237 PGVASLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARAI 296

Query: 299 GEDEKKARKILES 311
            +D    R    +
Sbjct: 297 AQDVVDTRAYFAA 309


>gi|326204070|ref|ZP_08193931.1| riboflavin biosynthesis protein RibF [Clostridium papyrosolvens DSM
           2782]
 gi|325985837|gb|EGD46672.1| riboflavin biosynthesis protein RibF [Clostridium papyrosolvens DSM
           2782]
          Length = 311

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 8/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V H+ + N     +     V +GNFDG+H+GH  ++   I+ +        V +F  H
Sbjct: 1   MQVIHSNDTNNIFSCYTG---VGLGNFDGLHIGHMALINTLIRESKLNGLSSVVYTFTKH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              I++       L   + + ++L +     L   +F    +  S E+F+  +L   L +
Sbjct: 58  TENILRKKLITPLLLTETKKIELLSETTLDNLYLDEFNEGFSRMSPEEFVVNILKNKLNI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  + G  +RFG    GD  +L++ G+KYGF  V I  +  +  +I+SS++IR A+  G+
Sbjct: 118 KLAVAGHDYRFGYKGGGDIPLLEEYGKKYGFKVVAIPPITCD-GEIISSTSIRQAIINGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  ++I ++V++G ++G T+GFPTAN+      +L   GVY  +    +   
Sbjct: 177 IETAYKLLGRNYSIIAEVVNGRRVGNTIGFPTANIHPEKYLVLPHNGVYITK-TLLNGRL 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+ + N G NPT        +E+ I DF ++IYG++  V F   +R E KF ++E+L   
Sbjct: 236 YNSMTNVGYNPTFEDVRQKTVETHIMDFDKDIYGEKIEVFFLKKIRDEKKFNNVEELVNQ 295

Query: 298 MGEDEKKARKILE 310
           + +D K +R  L 
Sbjct: 296 ISKDMKISRDYLS 308


>gi|88855375|ref|ZP_01130039.1| riboflavin kinase/ FMN adenyltransferase [marine actinobacterium
           PHSC20C1]
 gi|88815282|gb|EAR25140.1| riboflavin kinase/ FMN adenyltransferase [marine actinobacterium
           PHSC20C1]
          Length = 318

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +F ++E   ++P       V IG FDG+H GH  +L +  +IA+   +   V++F+ +
Sbjct: 1   MDLFESVE---AVPAGYGRAAVTIGKFDGVHGGHRAVLARLRQIADERGLRSVVVTFDRN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++++       L     + + L   G  A +   F    +  +AE F+  VL   L+ 
Sbjct: 58  PMSLLKPELCPLPLISKEQKLERLASTGIDATLMLTFDRALSEVNAEDFVATVLAGALDT 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   AGD  +L++ G ++ F  V + ++     + +SS+ +R  L +G 
Sbjct: 118 GVVLVGADFRFGARGAGDVELLRELGVRHNFEVVVVGDIELEAGRRISSTFVRELLAEGQ 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A+ +L    ++   V+ G++ GR LG+PTAN+Q  P+  +  +GVYA      D T 
Sbjct: 178 VAEASRILTAPHSVRGIVVLGQQRGRELGYPTANLQPVPEGFIPADGVYAAWLVI-DGTR 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++   + G NPT        +E+   D   +IYG+R  + F +++R  +KF  ++ L   
Sbjct: 237 FAAAVSIGNNPTFEGVAEKQVEAHALDQDFDIYGKRVEIEFVEFIRGMVKFSSVDSLVEQ 296

Query: 298 MGEDEKKARKIL 309
           M  DE+  R IL
Sbjct: 297 MCIDEETTRTIL 308


>gi|237785719|ref|YP_002906424.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758631|gb|ACR17881.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 321

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 97/322 (30%), Positives = 152/322 (47%), Gaps = 19/322 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++H ++   ++P  L   VV IG FDG+H GH  ++  A++ A     P  +++F PH
Sbjct: 1   MDIWHGLD---NIPQSLDASVVTIGVFDGVHRGHRRLIGTAVRRARELDVPCVLMTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L     ++ + E++G    +   FT   A  S  ++I++VLV  L  
Sbjct: 58  PVKVFAPERTPRLLGSLKDRQAMAEELGVDYFLTVDFTRSLAALSPTEYIEQVLVHQLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FG   AG    L+  G  YG     +  L +     +SS+ IR+ L +GH
Sbjct: 118 RAIVVGENFTFGHKAAGTSQTLETEGPLYGCDVDIV-PLLSEDGHTISSTFIRSQLDQGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  AA  LG  +++  +V HG    GR LG+PTAN+ +SP+  L  +GVYA  F      
Sbjct: 177 VDEAAWALGRPYSVYGEVEHGAGRGGRELGYPTANLYISPERALPADGVYAGWFTIDPGE 236

Query: 237 ----------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ESF+ D   ++YG   TV F DY+R   
Sbjct: 237 TVDGDMEPGVRYPTAISVGMNPTFNDD-RRSVESFVLDRHADLYGLYATVEFIDYVRGME 295

Query: 287 KFKDIEKLKIYMGEDEKKARKI 308
            F  +++L   M  D    R +
Sbjct: 296 TFSGVDELLAAMHRDVDAVRAM 317


>gi|224824630|ref|ZP_03697737.1| riboflavin biosynthesis protein RibF [Lutiella nitroferrum 2002]
 gi|224603123|gb|EEG09299.1| riboflavin biosynthesis protein RibF [Lutiella nitroferrum 2002]
          Length = 311

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M VF        LP       + IGNFDG+H+GH  +L +    A   + P  +L+F PH
Sbjct: 1   MQVFLGDPRRFGLPA----CALTIGNFDGVHMGHQNMLARLRAEADARDLPAALLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR     S P   LS    +   L ++G    L  Y+F    +  +A+ F+ +VLVE L+
Sbjct: 57  PREFFARSQPPARLSTLRDKVLFLRQLGLIDYLFVYRFNHGFSRMAAQDFVGQVLVEQLQ 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F+FG DR GD  +L       GF T  +  +   + +  SS+ +R  L  G
Sbjct: 117 ARYLLIGDDFQFGADRKGDFQLLSACP---GFVTEAMPSVLV-QGERASSTRVRECLAGG 172

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            +  A  LLG  + +   V+HG+K+GRT+GFPTAN+ L       +GV+ +   T D   
Sbjct: 173 DLAAAERLLGRPYQLSGRVMHGKKLGRTIGFPTANVHLPHRKPALQGVFVVEVDTPDGRK 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GVA+ G NPT+       LE  +FD++ ++YG+R +V F   LR E ++ ++ +L   
Sbjct: 233 -GGVASLGLNPTVSTTPDYKLEVHLFDYAGDLYGRRLSVRFLKKLRDEERYDNLTELVAQ 291

Query: 298 MGEDEKKARKILES 311
           +  D   A+  L S
Sbjct: 292 IEHDAASAKTYLTS 305


>gi|149928078|ref|ZP_01916325.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Limnobacter
           sp. MED105]
 gi|149823164|gb|EDM82401.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Limnobacter
           sp. MED105]
          Length = 318

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +      +       KG  + IGNFDG+H GH  +  + +  A    +   V++ +PH
Sbjct: 1   MKIIRRPRPH----TFAKGTALTIGNFDGVHSGHAELFRRVVFAARAQGLVPTVVTLHPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     +  +  +S    +   +++ G   +    F    A+ S E F+Q+VL+  L  
Sbjct: 57  PKEFFNPAFKLDRISTLRDRIIEMKRCGIEQVCILPFNKRMASLSPEAFVQEVLLNQLNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  FRFG  RAGD  +L+  GE +GF    + E++ + S+ VSSSNIR AL  G 
Sbjct: 117 KQVWVGDDFRFGAKRAGDFALLKGLGESHGFTVNDLAEVQTDGSR-VSSSNIREALKAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  AAH+LG+       ++HG+K+GRTLGFPT N++++       G+ A+      +   
Sbjct: 176 VAKAAHMLGHPLAYSGHIVHGKKLGRTLGFPTMNLRIAGRASALTGILAVWVHGLAEKPL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             VA+ G  PT+  +  +LLE+FI D+    YG+   +    ++RPE  F  ++ +   M
Sbjct: 236 PAVASMGVRPTVEQSDQILLETFIPDWQGNAYGKLLRIEVLAHIRPEQHFDSLDTMVEQM 295

Query: 299 GEDEKKARKILESSYP 314
            +D  KA  +L ++ P
Sbjct: 296 HKDTAKAMAMLAANQP 311


>gi|228986952|ref|ZP_04147078.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772730|gb|EEM21170.1| FMN adenylyltransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 335

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 9/319 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H    ++     L   V+A+G FDGIHLGH  ++  A +I         V++F PHP
Sbjct: 14  KLIHLTHPHEQNKLELPPTVMALGFFDGIHLGHQCVIRTAKQIADERGYKSAVMTFYPHP 73

Query: 60  RTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             ++ +  +    ++P   +EKI+E +G   L   KF    A+   +QF+   ++  L V
Sbjct: 74  SVVLGKKEAHAEYITPMCDKEKIVESLGIDILYVVKFDESFASLLPQQFVDDYII-GLNV 132

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L          TV   E    + + VSS+ +R  +  G 
Sbjct: 133 KHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKIEFQEEKVSSTALRKLIRNGE 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           +     +LG  +T+   V+HG+K GR +GFPTAN+ LS + LL   GVYA+R +  D   
Sbjct: 191 MEQIPSILGRAYTVAGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRLQVHD-EW 249

Query: 238 YSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF  I++L  
Sbjct: 250 YDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFNGIDELVD 309

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D+K A++   +   +
Sbjct: 310 QIAKDKKIAQEYFANEKNI 328


>gi|325845620|ref|ZP_08168904.1| riboflavin biosynthesis protein RibF [Turicibacter sp. HGF1]
 gi|325488318|gb|EGC90743.1| riboflavin biosynthesis protein RibF [Turicibacter sp. HGF1]
          Length = 305

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 176/313 (56%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V   + +NQ+  N  +G  VA+G FDG+H+GH L++++AI+    N     V++F+P+
Sbjct: 1   MKV---LNLNQTSFNSEEGLSVALGYFDGLHIGHQLVIKEAIEYAKKNGLKSAVMTFSPN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++  S    ++PP+ + ++L ++G   L+   F  E A+  A  FI++ LV+  +V
Sbjct: 58  PNVILKKLSSEHLITPPTEKVRLLTELGVDYLMILTFNEELASLRAIDFIERYLVKT-KV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V TG  FRFGK   G   +L++  EK+  +     E+   + + + ++ I++ L  G+
Sbjct: 117 EHVSTGFDFRFGKKGEGSVELLRQYPEKFSLNVTDKKEI---EGEKIGATEIKSYLAVGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A  +LG  +T+   VI G++ GR +GFPTAN+  +   I+ K GVYA+R   + Q S
Sbjct: 174 IEKANEMLGRPYTLCGTVISGQQKGRQIGFPTANVATTEAYIIPKNGVYAVRVWVKGQ-S 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G+ N G NPT      + +E  I DF+Q+IYGQ   V F+  LR E +F  IE L   
Sbjct: 233 YAGMCNIGHNPTFNFIDNVSVEVHILDFNQDIYGQEMKVEFYHRLRDEERFSSIEALMTQ 292

Query: 298 MGEDEKKARKILE 310
           +  D K  R   +
Sbjct: 293 LNHDRKTVRGYFK 305


>gi|229061412|ref|ZP_04198757.1| FMN adenylyltransferase [Bacillus cereus AH603]
 gi|228717835|gb|EEL69483.1| FMN adenylyltransferase [Bacillus cereus AH603]
          Length = 335

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 166/320 (51%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           +H+ H  E N+     L   V+A+G FDGIHLGH  ++  A KI         V++F+PH
Sbjct: 16  IHLTHPHEQNKI---ELPPTVMALGYFDGIHLGHQRVIRTAKKIADERGCKSAVMTFHPH 72

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  + +  ++P  ++E+I+  +G   L   KF    A    +QF+ + ++  L 
Sbjct: 73  PSVVLGKKEAHVEYITPMRLKEEIIASLGIDILYVVKFDEPFAGLLPQQFVDEYII-GLN 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +G+   G    L          TV   E    + + VSS+++R  +  G
Sbjct: 132 VKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEYQEEKVSSTSLRKLIRNG 189

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     +LG  +T+E  V+HG+K GR +GFPTAN+ LS + LL   GVY +R +  D  
Sbjct: 190 EMEQIPSILGRAYTVEGTVVHGDKRGRQIGFPTANVGLSDEYLLPPVGVYTVRLKVHD-E 248

Query: 237 SYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            + GV N G  PT   N   L +E  +F+F+++IY Q  TV +   +R E KF  I++L 
Sbjct: 249 WHDGVCNIGYKPTFKENERQLSIEVHLFEFNKDIYDQSVTVEWHMRIREEKKFNGIDELV 308

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+K A++   S   +
Sbjct: 309 AQIAQDKKVAQEYFASVKNI 328


>gi|111225114|ref|YP_715908.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Frankia
           alni ACN14a]
 gi|111152646|emb|CAJ64387.1| Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Frankia alni
           ACN14a]
          Length = 309

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 9/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +   E   + P   +GGVV IG FDG+HLGH  I+ QA+  A        VL+F+PH
Sbjct: 1   MQTWRGAE---NTPAEWRGGVVTIGFFDGVHLGHRQIIGQAVARARERGERAVVLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + ++L  +G  AL    FTL+ +     +F+  +LVE L  
Sbjct: 58  PGEVLRPGSHPALLTTLRHKAELLAAIGVDALCVQPFTLDFSRLPPPEFVHGMLVEQLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F +G   AG    L   G + GF    +  +R+   +++SS+ IR  + +G 
Sbjct: 118 RVVVVGENFTYGHRAAGTLATLAADGAREGFEVDGVRLVRSGD-RVLSSTEIRRRVAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V +AA  L  R  +E  V+HG+  GRT+G+PTAN++++P   +  +GVYA  F   D   
Sbjct: 177 VESAAAALARRHRVEGVVVHGDARGRTIGYPTANVEVTPWAAVPADGVYAG-FACWDGHR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
                + G NPT        +E+F+ DF  ++YG+     F   LRP ++F+ +++L   
Sbjct: 236 QPAAISIGTNPTFA-GRERRVEAFLLDFDGDLYGEYMAYEFTSRLRPTLRFESVDELVTQ 294

Query: 298 MGEDEKKARKI 308
           M  D +  R +
Sbjct: 295 MAADVEATRTV 305


>gi|298387807|ref|ZP_06997357.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 1_1_14]
 gi|298259412|gb|EFI02286.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 1_1_14]
          Length = 320

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M + +  + +  +P      V  IG FDG+H+GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIN--DTSAMIPE---PCVATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ ++     L+ P  +  +L   G    +   FT + +  +A++F+ ++L E  +V
Sbjct: 56  PRKVMNAAYHPELLTTPEEKTNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN------KSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G+  G   +      ++      +S  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFDDYVRYGQAIGIEVIRAQAYTDDIQIDTTQSAPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHQGDVDAAARCLGYEYFLDGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+K+  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDS 294

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I++L   + +D ++   IL
Sbjct: 295 IDELIAQLHKDAEETEAIL 313


>gi|221068809|ref|ZP_03544914.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni KF-1]
 gi|220713832|gb|EED69200.1| riboflavin biosynthesis protein RibF [Comamonas testosteroni KF-1]
          Length = 353

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 151/342 (44%), Gaps = 30/342 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +F  I    + P       V IGNFDG+H GH  +L   +A       P   ++F PH
Sbjct: 1   MKIFRGI----NHPGLAPACAVTIGNFDGVHRGHQAMLGLLKAEAAQRGIPSCAMTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE  G   ++   F    A+ S E FIQ VL+
Sbjct: 57  PRDYFAQKLGKPELAPARVGTLRDKLSQLEVCGVDQVVILPFNQALASQSPEDFIQDVLI 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  K V+ G  FRFG  RAGD  +L   G+  GF    ++    +    VSS+ +R A
Sbjct: 117 SGLGAKYVLVGDDFRFGARRAGDYAMLDNAGQALGFDVARMNSYEVH-GLRVSSTAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L  G +  AA LLG+ + I   V+HG K+GR L         GF T N++         G
Sbjct: 176 LAAGDMQQAAKLLGHPYRISGHVVHGRKLGRKLAESIDGSEDGFRTLNLRFDHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++ PN    G +LLE+  FD+  ++     YG+   
Sbjct: 236 IFAVLVHGLTDKPLQGVANLGVRPSLDPNDINGGRVLLETHCFDWPAQLGGEGAYGKIIR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           V     L  E+K+  ++ L + + +D   AR    S++  S 
Sbjct: 296 VELLHKLHDELKYDSLDALTVGIAKDCDDARAFFASAHIPSH 337


>gi|229588313|ref|YP_002870432.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           fluorescens SBW25]
 gi|229360179|emb|CAY47036.1| riboflavin biosynthesis protein [Pseudomonas fluorescens SBW25]
          Length = 312

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 144/301 (47%), Gaps = 7/301 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L + G   ++   F     + SA +F+ ++LV+ L V
Sbjct: 58  PREYFTPETAPARLARLRDKLQLLAEEGVDRVLCLAFNQRLQSLSAAEFVDRILVDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ  G   GF       +       VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGCDRVGDFDFLQHAGVNQGFTVEAAQTV-ELDGLRVSSTQVRNALAAAD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  S+
Sbjct: 177 FALAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI-DGQSW 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 236 PGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEALKTAI 295

Query: 299 G 299
            
Sbjct: 296 N 296


>gi|255011546|ref|ZP_05283672.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           3_1_12]
 gi|313149372|ref|ZP_07811565.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138139|gb|EFR55499.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 313

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 11/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M + HNI      P      V  IG FDG+H GH  +++Q  ++A        +++F  H
Sbjct: 1   MQIIHNIPAFTPEP-----CVATIGFFDGVHTGHRFLIKQVRELAAARGLRSALITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++++      L+ P  +  +LE+ G        FT E +  +A +F+  +L +   V
Sbjct: 56  PRKVMKADYRPELLTTPEEKRTLLEETGVDYCFMLDFTQEVSRLTAREFMSDLLRDRYRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG +R+       + G + G   +       +    VSSS IR  L +G 
Sbjct: 116 QTLVIGYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDD-LHVSSSVIRKMLHQGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  A+  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+   T D  
Sbjct: 175 VDMASRCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVH-VTFDGR 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           +Y+G+ N G  PT+       +E  I  F   IY +   +SF  YLRPE+KF  I+ L  
Sbjct: 234 TYNGMLNIGTRPTIGNGPERSIEVNILHFHSNIYDKFIRISFVKYLRPELKFDGIDGLIA 293

Query: 297 YMGEDEKKARKILESSYPL 315
            +  D      +L +   +
Sbjct: 294 QLHRDAADVEALLGNKQNV 312


>gi|328957416|ref|YP_004374802.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Carnobacterium sp. 17-4]
 gi|328673740|gb|AEB29786.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Carnobacterium sp. 17-4]
          Length = 325

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 107/326 (32%), Positives = 173/326 (53%), Gaps = 13/326 (3%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M +   H+      +P      V+A+G FDG+H GH  ++ +A KI   N   + V++FN
Sbjct: 1   MEIIKLHHPYKEGEIPKD--KVVLALGFFDGVHRGHQEVIGRAKKIAEKNQLKLAVMTFN 58

Query: 57  PHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
            HP  + +  +P     LS  S +E+++ K+G   L    FT   A  + ++F+++ ++ 
Sbjct: 59  QHPSIVFKKLNPDHHKYLSTISRKEELMGKIGVDFLYEVDFTSAFAGLTPQEFVEQYII- 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  +TV+ G  + FGK        L     K  F  V +++ + +K   +SS+ IR AL
Sbjct: 118 GLHAQTVVAGFDYSFGKKEVASMEHLP-LYAKDRFEIVVVEK-QLSKEDKISSTRIRLAL 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ 233
             G +  A +LLGY +     V+HG+  GR LGFPTAN+++   + L + GVYA+     
Sbjct: 176 EVGDMDAANNLLGYVYATPGRVVHGDARGRLLGFPTANIEVENFVKLPRIGVYAVEISVG 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Q  Y G+A+ G N T  PN PL +E +I DF+++IYG+  TV ++DYLR E KF  I+ 
Sbjct: 236 GQV-YKGMASIGHNVTFEPNRPLTVEVYILDFNEDIYGENVTVFWYDYLRNEEKFDSIDA 294

Query: 294 LKIYMGEDEKKARKILESSYPLSERD 319
           L   + +DE       E+   L+ ++
Sbjct: 295 LIAQLKQDELDTAHFFENYKGLTHKN 320


>gi|147677608|ref|YP_001211823.1| FAD synthase [Pelotomaculum thermopropionicum SI]
 gi|146273705|dbj|BAF59454.1| FAD synthase [Pelotomaculum thermopropionicum SI]
          Length = 312

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 157/310 (50%), Gaps = 8/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V H+ +  +    +    V+ +GNFDG+HLGH  ++ + + +         V +F+PH
Sbjct: 1   MIVHHHWKDLRE--EYYHRLVIGLGNFDGVHLGHQKLISELVSMGKELEGTTAVFTFHPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    L     ++K++ +MG   L +  F L+ AN S E FI+ VL E L V
Sbjct: 59  PLAVLDPENCPPLLLTQESKQKLIARMGVEVLFQVPFDLKLANISPEDFIRIVLYEELGV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  + FG    G   +L+K   +YG+    +  +   + Q+VSS+ IR  L KG 
Sbjct: 119 IGVVVGYNYTFGHKGKGTPDLLEKFSGRYGYRLKVVPPV-TVEGQVVSSTLIRGLLLKGE 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           V  A+  LGY   +E  V+ G++ G  LGFPTAN+ +  ++L    GVY+      D  S
Sbjct: 178 VAEASRYLGYYPFVEGTVVAGDRRGSKLGFPTANLDIDQNLLVPSNGVYSAMVNV-DGDS 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+AN G  PT        +E  + DF +++YG+   VSF   LR E KFK    L   
Sbjct: 237 YYGLANIGTKPTFQ-GKKRNIEVHLLDFYRDLYGKHIKVSFTRRLREEKKFKTPADLVKQ 295

Query: 298 MGEDEKKARK 307
           +  D ++AR 
Sbjct: 296 IERDIRQARN 305


>gi|46578866|ref|YP_009674.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603529|ref|YP_967929.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris DP4]
 gi|46448278|gb|AAS94933.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563758|gb|ABM29502.1| FMN adenylyltransferase [Desulfovibrio vulgaris DP4]
 gi|311232729|gb|ADP85583.1| riboflavin biosynthesis protein RibF [Desulfovibrio vulgaris RCH1]
          Length = 314

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 10/315 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + EI   L    +G  V IGNFDG+H GH  ++ +  + A     P  V++F P
Sbjct: 1   MEIARELQEITLDLS---RGTCVTIGNFDGVHQGHRKLIGRTRQKAALRGMPSVVVTFCP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++        ++    +  +LE +G    +  +FT E A    E F++ VLVE L 
Sbjct: 58  HPLRVLVGPHTPPLITDYDKKLDLLEGLGVDLALMLRFTRELAALEPEDFVRTVLVEGLN 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ ++ G  F  GK R G+  +L + G +YGF    +D +  N +  VSS+ IR  +  G
Sbjct: 118 VRELVVGYDFSLGKGRKGNAEVLAQLGARYGFEVEQLDPVIVNDAV-VSSTRIRDLIRAG 176

Query: 178 HVLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
            V     LL   + +   V+H   + GR LGFPTAN++   ++L   GVYA      D  
Sbjct: 177 EVWEVRPLLDRFYVVRGKVVHGMGRGGRLLGFPTANIEPRDELLPMPGVYATWVNV-DGA 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + GV + G NPT   +  L +E+ I DF ++IYG   +V+F   LR   +F   E+L  
Sbjct: 236 LHRGVTSIGHNPTF-GDERLSVETHILDFDRDIYGWDISVAFVQRLREPKRFSGPEELVA 294

Query: 297 YMGEDEKKARKILES 311
           ++  D   AR+IL++
Sbjct: 295 HIRHDVSLARQILDA 309


>gi|90422910|ref|YP_531280.1| riboflavin biosynthesis protein RibF [Rhodopseudomonas palustris
           BisB18]
 gi|90104924|gb|ABD86961.1| riboflavin kinase / FMN adenylyltransferase [Rhodopseudomonas
           palustris BisB18]
          Length = 323

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)

Query: 1   MHV-FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNP 57
           M + F  I          KG VVA+GNFDG+HLGH  ++   +++A     P   ++F P
Sbjct: 1   MTIGFAVIRDTTPAAAIPKGAVVAMGNFDGVHLGHRAVIGACLEMAKKHRKPALAVTFEP 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR+      P F L+  + + ++L   G    +   F    A  SA+ FI+  L   L 
Sbjct: 61  HPRSFFSPEKPQFPLTDVTAKLRLLAGAGLDGAVVLSFDAARAATSAQDFIRDELHGRLG 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +  +  G  F FGK R G   +L     K G     +    +     VSSS IR ALT+G
Sbjct: 121 ITGIAVGYNFHFGKGRGGSPSLLASEAPKLGIEVD-VQPHVDVGEHPVSSSAIRQALTEG 179

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            + +A  +LG  + +  +V+HG+K GR LG+PTAN++L P   LK+G+YA+R    +   
Sbjct: 180 RIFDATTMLGAPWFVTGEVVHGDKRGRLLGYPTANIRLDPHCGLKQGIYAVR-VGMNGRH 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VANFGR PT   NG  LLE F+FDF  ++YG +  V+F D++RPE KF   E L   
Sbjct: 239 LDAVANFGRRPTF-DNGAPLLEVFVFDFQGDLYGAKLDVAFIDFIRPEAKFDSAEALIRQ 297

Query: 298 MGED 301
           M +D
Sbjct: 298 MDDD 301


>gi|225011222|ref|ZP_03701681.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-3C]
 gi|225004636|gb|EEG42599.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-3C]
          Length = 318

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 10/301 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              V IG FDG+HLGH  I++Q ++ A     P  VLSF PHPR ++   S I  L    
Sbjct: 15  KTAVTIGTFDGVHLGHTQIIKQLVEKAKILKVPAVVLSFYPHPRIVLHQDSGIKLLDSLQ 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   LE +G    + Y F+   +   A  F+  +LV+ L  K+V+ G   RFG++R  +
Sbjct: 75  EKAAKLEALGVDYFVVYPFSKSFSRMKAATFVSDILVKGLHAKSVLIGYDHRFGRNRNAN 134

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G++Y F  + I   +  ++  +SS+ IR AL +G V  A   LG  F++   V
Sbjct: 135 IEDLRNYGKQYNFEVIEISA-QAIEAVAISSTKIRKALAQGQVKKANQFLGSAFSLSGKV 193

Query: 197 IHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           + G++IGRT+GFPTAN++   S  ++ KEGVY I+     Q  + G+ N G+NPT+    
Sbjct: 194 VSGKQIGRTMGFPTANIKPTYSYKLIPKEGVYVIKSHLGGQEVF-GMLNIGQNPTVTAQD 252

Query: 255 PLL----LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E+  F+F++++Y Q  TV   D LR EIKF+ +E L   + +D+  A  I+ 
Sbjct: 253 APSIFPKIEAHFFNFNKDLYEQEITVCLIDRLRDEIKFESLEALASQLKKDQSNALNIVT 312

Query: 311 S 311
           +
Sbjct: 313 A 313


>gi|297562518|ref|YP_003681492.1| riboflavin biosynthesis protein RibF [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846966|gb|ADH68986.1| riboflavin biosynthesis protein RibF [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 315

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 103/321 (32%), Positives = 171/321 (53%), Gaps = 17/321 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +  +E    +P+     VVA+G FDG+H GH  ILE A+        P+TV++F+PH
Sbjct: 1   MRRWDGLE---GVPSGWGRSVVAVGVFDGVHRGHQAILETAVGHGRELGLPVTVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+T+++ ++P   L+P   + ++L + G  A+    FT + ++ + E+F+Q+VLV+ L  
Sbjct: 58  PQTVLRGTTPP-VLTPLERRVELLTEYGADAVCVLPFTKDLSSLTPEEFVQRVLVDRLHA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG   +GD   L   G +YGF    +  + +  +  ++S+ +R  L +G 
Sbjct: 117 AAVVVGEDFRFGHRASGDVAALAALGAEYGFTADGVALVADGDT--ITSTRVRGLLAEGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ- 235
           V  AA LLG    +  +V+HG   GR  LGFPTANM L PD  +  +GVYA      +  
Sbjct: 175 VAGAAELLGRPHRVGGEVVHGAARGRELLGFPTANMDLLPDTAVPGDGVYAGWLHRSEPA 234

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKD 290
               + +    + G NPT        +E++  D    ++YG R TV F  ++R + +F  
Sbjct: 235 PGQESRWPAAISVGSNPTF-DGAERTVEAYALDRDDLDLYGLRMTVDFTVHIRGQERFDS 293

Query: 291 IEKLKIYMGEDEKKARKILES 311
           I++L + M  D  + R++L +
Sbjct: 294 IDELIVAMRRDVDRCREVLRA 314


>gi|261419467|ref|YP_003253149.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           sp. Y412MC61]
 gi|319766282|ref|YP_004131783.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC52]
 gi|261375924|gb|ACX78667.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC61]
 gi|317111148|gb|ADU93640.1| riboflavin biosynthesis protein RibF [Geobacillus sp. Y412MC52]
          Length = 328

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 9/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTL 72
             L   V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  ++   S + ++
Sbjct: 17  QALPPTVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVVLGKQSELRSI 76

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   +E+++  +G + L   +FT   A  S E F+ +  ++ L VK V+ G  F +G+ 
Sbjct: 77  TPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQY-LDGLHVKHVVAGFDFTYGRF 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    +     +  F    I +L  +  + VSSS +R  L  G V     LLG  + +
Sbjct: 136 GKGTMETMP-IHARGRFGQTVIPKLAID-GEKVSSSRVRKLLEDGAVEQLPRLLGRFYEL 193

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  V+ GE+ GR +GFPTAN+ L S  +L   GVYA++     Q  Y GVAN G  PT  
Sbjct: 194 EGTVVAGERRGRMIGFPTANIALNSDYVLPAVGVYAVKAVIGGQV-YEGVANVGYKPTFH 252

Query: 252 PNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   +E  +F+FS +IYGQ  T+ +   LR E KF  +++L   +  D+K+A +  
Sbjct: 253 KTREGLPNIEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFASVDELTAQIARDKKEAEQYF 312

Query: 310 E 310
            
Sbjct: 313 R 313


>gi|295836224|ref|ZP_06823157.1| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB74]
 gi|295825912|gb|EDY46191.2| riboflavin biosynthesis protein RibF [Streptomyces sp. SPB74]
          Length = 320

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++  +G  AL+   FT E +  S   F + VL E L  
Sbjct: 58  PSEVVRPGSHPPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+  +L + G +  F    +D   +      Q  SS+  R  + 
Sbjct: 118 KVVVEGPNFRFGHKAAGNVTLLAELGREDDFEVDLVDLYVSGDAGDGQPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVAGAAEILGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVAD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
             +     + G NP         +E++  D    ++YG    V F  Y+R   KF  I+ 
Sbjct: 238 -EAMPAAISVGTNPQF-DAKHRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDV 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M ED K++R ++  
Sbjct: 296 LLTAMAEDVKRSRALIAE 313


>gi|319638560|ref|ZP_07993322.1| riboflavin kinase/FMN adenylyltransferase [Neisseria mucosa C102]
 gi|317400309|gb|EFV80968.1| riboflavin kinase/FMN adenylyltransferase [Neisseria mucosa C102]
          Length = 308

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 18/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M+++      +  P   +G  V IGNFDG+HLGH  IL++  +       P+ V+ F P 
Sbjct: 1   MNIWLG---QRHPPQFPQGAAVTIGNFDGVHLGHKHILQKLKREADRRGLPVVVVIFEPQ 57

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P+            + +SP   + ++L + G   A+   +F    +  SA+ FI ++L +
Sbjct: 58  PKEFFARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFNQTFSEMSAQAFIDRLLRK 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRT 172
            L  + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R 
Sbjct: 118 TLNTRYLLIGDDFRFGAGREGCFELLAQQPDMQTECTPSVIVEDIRT------SSTAVRQ 171

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+ G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +    
Sbjct: 172 ALSDGKLEYAKKLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVEADG 231

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T   GVA+FG NPT+  N    LE  +FDFS ++YGQR  V F   LR E KF+ IE
Sbjct: 232 AFGTR-RGVASFGFNPTVSNNRSQKLEVHLFDFSGDLYGQRIFVRFLHKLRDEKKFESIE 290

Query: 293 KLKIYMGEDEKKARKI 308
            LK  + +D + A+  
Sbjct: 291 ALKTQILQDMEDAKVW 306


>gi|167037617|ref|YP_001665195.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116032|ref|YP_004186191.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856451|gb|ABY94859.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929123|gb|ADV79808.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 316

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/291 (34%), Positives = 161/291 (55%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++   N    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    +  +   +  +VSSS IR  +  G V  A  LLG  F+++  VIH
Sbjct: 137 TLKKYSKIYSYKVYVVPPV-IREGIVVSSSYIRELIKSGKVEEANSLLGRFFSLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R + +D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIED-KFYIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK  + +D   A+  
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALKEQVFKDINYAKNF 304


>gi|219669690|ref|YP_002460125.1| riboflavin biosynthesis protein RibF [Desulfitobacterium hafniense
           DCB-2]
 gi|219539950|gb|ACL21689.1| riboflavin biosynthesis protein RibF [Desulfitobacterium hafniense
           DCB-2]
          Length = 318

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 7/311 (2%)

Query: 7   IEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTII 63
           ++I Q LP+      V+A+GNFDG+HLGH  +L+  ++        + VL F PHP  ++
Sbjct: 1   MQIIQELPSDPGHQCVLALGNFDGVHLGHQRLLKSGLEQAAQKGVDLAVLLFEPHPLKLL 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                +  L+    Q ++  ++G   +    FT E A+ S E F++ +LV  L V  ++ 
Sbjct: 61  FPERVLGFLTTQKEQMRLFSEIGVDRVYLVPFTKEMADTSPEGFVRDILV-KLGVIHIVV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG    G    LQ  G+ YGF    +   +  + +++SS+ +R AL  G  + A 
Sbjct: 120 GFNYSFGALGKGTAEDLQCYGQDYGFGVSVLQP-QTFEGKVISSTAVRKALLNGDAVQAK 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + +   V+ GE+ G  LG+PTAN+++  + I+ K GVYA+    + +  + G+ 
Sbjct: 179 KLLGRTYKLVGTVVEGERRGHDLGYPTANLRIYEELIIPKRGVYAVWAEIEGRLVH-GMM 237

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      L +E   FDFS ++YG    +   + +R E KF   ++LK  +  D 
Sbjct: 238 NIGMKPTFHEEYALTVEIHFFDFSGDLYGMELAICCEEKIRDERKFNGFDELKGQLERDA 297

Query: 303 KKARKILESSY 313
            K +++LE  +
Sbjct: 298 LKTKQVLEEIF 308


>gi|189424708|ref|YP_001951885.1| riboflavin biosynthesis protein RibF [Geobacter lovleyi SZ]
 gi|189420967|gb|ACD95365.1| riboflavin biosynthesis protein RibF [Geobacter lovleyi SZ]
          Length = 315

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M      + +  L    +  VV IGNFDG+H GH  I  Q  + A        V++F+PH
Sbjct: 1   MRTIITNDFSHPL---AERSVVTIGNFDGVHRGHREIFRQVTERARALSATSVVVTFSPH 57

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++Q  +  F  ++    + +++ +     L+   FT E A  SA+ F++ VL   L 
Sbjct: 58  PLRVLQPDNRRFCLITTDEQKRELIAENDIDLLLVIPFTREFAAVSADDFVRSVLHACLG 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ ++ G  + FG+ R G+   L + G++  F    ++ +  +   + SSS +R  +  G
Sbjct: 118 VRFLVIGHDYAFGRGREGNEQFLVQMGQRLDFDVKVLEPV-GDGGVLFSSSVVRRLVADG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V++A  +LG    +   V+HG +IGR+LGFPTAN+    +++  +GVYA+         
Sbjct: 177 AVVDALQILGRCHRVCGQVVHGREIGRSLGFPTANIVTHNELIPGDGVYAVWVSVLG-EL 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G  + G NPT    G   +E F+FDF+ ++YGQ   V F + LR   +F D+  LK  
Sbjct: 236 LMGACSIGVNPTF-EGGQHTIEVFLFDFNDDLYGQDVVVHFVEKLRDVTRFADVAALKSQ 294

Query: 298 MGEDEKKARKILESSYPLSE 317
           +  D   AR IL +  P+ +
Sbjct: 295 IAADVVSARAILAAGLPVEQ 314


>gi|89895259|ref|YP_518746.1| FAD synthase [Desulfitobacterium hafniense Y51]
 gi|89334707|dbj|BAE84302.1| FAD synthase [Desulfitobacterium hafniense Y51]
          Length = 318

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 7/311 (2%)

Query: 7   IEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTII 63
           ++I Q LP+      V+A+GNFDG+HLGH  +L+  ++        + VL F PHP  ++
Sbjct: 1   MQIIQELPSDPGHQCVLALGNFDGVHLGHQRLLKSGLEQAAQKGVDLAVLLFEPHPLKLL 60

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                +  L+    Q ++  ++G   +    FT E A+ S E F++ +LV  L V  ++ 
Sbjct: 61  FPERVLGFLTTQKEQMRLFSEIGVDRVYLVPFTKEMADTSPEGFVRDILV-KLGVIHIVV 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  + FG    G    LQ+ G+ YGF    +   +  + +++SS+ +R AL  G  + A 
Sbjct: 120 GFNYSFGALGKGTAEDLQRYGQDYGFGVSVLQP-QTFEGKVISSTAVRKALLNGDAVQAK 178

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVA 242
            LLG  + +   V+ GE+ G  LG+PTAN+++  + I+ K GVYA+    + +  + G+ 
Sbjct: 179 KLLGRTYKLVGTVVEGERRGHDLGYPTANLRIYEELIIPKRGVYAVWAEIEGRLVH-GMM 237

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT      L +E   FDFS ++YG    +   + +R E KF   ++LK  +  D 
Sbjct: 238 NIGMKPTFHEEYALTVEIHFFDFSGDLYGMELAICCEEKIRDERKFNGFDELKGQLERDA 297

Query: 303 KKARKILESSY 313
            K +++LE  +
Sbjct: 298 LKTKQVLEEIF 308


>gi|307264919|ref|ZP_07546481.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306920177|gb|EFN50389.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 316

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++   N    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDRQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGYNYRFGYKALGNVN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    I  +   +  +VSSS IR  +  G +  A  LLG  F++   VIH
Sbjct: 137 TLKKYSKIYSYKVYVIPPV-IREGIVVSSSYIRELIKSGKIEEANSLLGRFFSLRGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R + +D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIED-KFYIAVTNVGSKPTF-GGKNIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK  + +D   A+  
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALKEQVFKDINYAKNF 304


>gi|297530558|ref|YP_003671833.1| riboflavin biosynthesis protein RibF [Geobacillus sp. C56-T3]
 gi|297253810|gb|ADI27256.1| riboflavin biosynthesis protein RibF [Geobacillus sp. C56-T3]
          Length = 328

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 9/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTL 72
             L   V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  ++   S + ++
Sbjct: 17  QALPPTVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVVLGKQSELRSI 76

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   +E+++  +G + L   +FT   A  S E F+ +  ++ L VK V+ G  F +G+ 
Sbjct: 77  TPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQY-LDGLHVKHVVAGFDFTYGRF 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    +     +  F    I +L  +  + VSSS +R  L  G V     LLG  + +
Sbjct: 136 GKGTMETMP-IHARGRFGQTVIPKLAVD-GEKVSSSRVRKLLEDGAVEQLPRLLGRFYEL 193

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  V+ GE+ GR +GFPTAN+ L S  +L   GVYA++     Q  Y GVAN G  PT  
Sbjct: 194 EGTVVAGERRGRMIGFPTANIALNSDYVLPAVGVYAVKAVIGGQV-YEGVANVGYKPTFH 252

Query: 252 PNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   +E  +F+FS +IYGQ  T+ +   LR E KF  +++L   +  D+K+A +  
Sbjct: 253 KTREGLPNIEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFASVDELTAQIARDKKEAEQYF 312

Query: 310 E 310
            
Sbjct: 313 R 313


>gi|261363879|ref|ZP_05976762.1| riboflavin biosynthesis protein RibF [Neisseria mucosa ATCC 25996]
 gi|288567874|gb|EFC89434.1| riboflavin biosynthesis protein RibF [Neisseria mucosa ATCC 25996]
          Length = 309

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 108/316 (34%), Positives = 163/316 (51%), Gaps = 18/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M ++         P+  +G  V IGNFDG+HLGH  IL++  + A     P+ V+ F P 
Sbjct: 1   MKIWLG---QHRTPDFPQGSAVTIGNFDGVHLGHKHILQKLKQEADARGLPVVVVIFEPQ 57

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P+            + +SP   +  +LE+ G   A+   +F    A+  A+ FI  +L +
Sbjct: 58  PKEFFARQTGKKQPYRISPLRTKLNLLEQTGCVDAVWVLRFNQTFADMDAQDFINLLLRK 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRT 172
            L  + ++ G  FRFG  R GD  +L  + +     T  V ++++R       SS+ +R 
Sbjct: 118 TLNTRYLLIGDDFRFGAGRRGDFELLATQPDIQTDRTPSVIVEDIRT------SSTAVRN 171

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL++G +  A  LLG+ +T+   V HG+K+GRT+  PTAN+QL P      GV+ +    
Sbjct: 172 ALSEGRLDYAKKLLGHDYTLSGKVKHGKKLGRTINAPTANIQLPPHHYALSGVFVVEVDG 231

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T   GVA+FG NPT+  N    LE  +FDF++ IYGQR  V F   LR E KF  I 
Sbjct: 232 TFGTK-RGVASFGFNPTVSNNRVQKLEVHLFDFNENIYGQRLNVRFLHKLRDEKKFDSIA 290

Query: 293 KLKIYMGEDEKKARKI 308
           +LK+ + +D K AR  
Sbjct: 291 ELKVQIEQDMKNARHW 306


>gi|160900815|ref|YP_001566397.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Delftia
           acidovorans SPH-1]
 gi|160366399|gb|ABX38012.1| riboflavin biosynthesis protein RibF [Delftia acidovorans SPH-1]
          Length = 349

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 105/354 (29%), Positives = 156/354 (44%), Gaps = 38/354 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +F       + P       V IGNFDG+H GH  +L    A       P  VL+F PH
Sbjct: 1   MKIFRGF----NHPGRESACAVTIGNFDGVHRGHQAMLALLSAEAAQRGVPTCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE+ G    +   F    A+ S + FI +VLV
Sbjct: 57  PRDYFAQTLGRPEIAPARIGTLRDKLSELERCGVDQTVVLPFNQTLASQSPQAFIDEVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  K V+ G  FRFG  RAGD  +L   G++ GF    ++    +    VSS+++R A
Sbjct: 117 AGLGAKYVLVGDDFRFGTQRAGDYAMLDAAGQRQGFDVARMNSYEVH-GLRVSSTHVRAA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G + +AA LLG+ +TI   V+HG K+GR+L         GF T N++ +       G
Sbjct: 176 LAEGRMQDAARLLGHPYTISGHVVHGRKLGRSLAESRQGAGDGFRTLNLRFNHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRN----PTMVPNGPLLLESFIFDFSQ-----EIYGQRCT 275
           ++A+     ++    GVAN G      PT V  G +LLE+   D+       E YG+   
Sbjct: 236 IFAVLVHGLNERPLRGVANLGVRPSLDPTDVNGGRVLLETHCLDWPGAPGGEEAYGKIIR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE--------SSYPLSERDRI 321
           V     L  E+K+  ++ L   + +D   AR             +   + RDRI
Sbjct: 296 VELLHKLHDELKYDSLDALTAGIAKDCDDARAFFATIHTPIYTETRRQTTRDRI 349


>gi|59802563|gb|AAX07518.1| riboflavin kinase [Gemmata sp. Wa1-1]
          Length = 317

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 93/307 (30%), Positives = 152/307 (49%), Gaps = 5/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
            + ++  P    G  V +GNFDG+H GH  ++  A + A     P+ V++F+P P  ++ 
Sbjct: 6   FDWSEYAPREFTGAAVTVGNFDGVHRGHQALVAAARRHAESVRGPVVVVTFDPPPHQVLH 65

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             S    L+  + + ++L  +G   ++  + +      S E F + V+V  L  K ++ G
Sbjct: 66  PGSERPPLTTIAQRSELLHAIGADHVVVLRTSPALLALSPEAFFEDVIVRQLGAKALVEG 125

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+ RAG    L+      G     I +      + VSSS +R AL  G V  AA 
Sbjct: 126 YDFRFGRGRAGTNETLKALCADAGLEFTAIPQY-AVGGEPVSSSRVRAALVNGDVSRAAE 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LL   + I   V+ G K GRT+GFPTAN+     +L   GV+A+R    D  ++   AN 
Sbjct: 185 LLNRPYRITGTVVTGAKRGRTIGFPTANLDNVLTVLPGNGVFAVRA-IVDGAAHQAAANI 243

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT   +    +E  + DF+ ++YG+  +V F   LR    FK + +L   + +D  +
Sbjct: 244 GPNPTFGEDA-RKIEVHLIDFAGDLYGKEMSVEFVARLRETKPFKGVSELIEQLKQDVIR 302

Query: 305 ARKILES 311
           A+++L +
Sbjct: 303 AQEVLST 309


>gi|305665466|ref|YP_003861753.1| Riboflavin kinase / FAD synthetase [Maribacter sp. HTCC2170]
 gi|88710222|gb|EAR02454.1| Riboflavin kinase / FAD synthetase [Maribacter sp. HTCC2170]
          Length = 308

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 100/296 (33%), Positives = 155/296 (52%), Gaps = 7/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
               + IG FDG+H+GH  IL++ I    +     TVL+F PHPR ++Q  S I  L+  
Sbjct: 14  HPTAITIGTFDGVHIGHQKILKKLIKKANSKKLKSTVLTFFPHPRMVLQKDSDIKLLNTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + KILE +G   LI + FT E +  SA +F++ +LV  L+ K +I G   RFG++R  
Sbjct: 74  DEKIKILEGLGLDILIIHPFTKEFSRLSATEFVRDILVNALQAKKIIIGYDHRFGRNREA 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L   G    F    I     ++   VSS+ IR +L +G +  A   LGY + +   
Sbjct: 134 NINDLIAFGSSLDFKVDEISAQEIDE-VSVSSTKIRKSLEEGKIETANKYLGYPYMLTGS 192

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V  G+ +GR + FPTAN+ +     ++ K GVY ++    D T+ SG+ N G NPT+   
Sbjct: 193 VKKGKGLGRQIQFPTANLHIEESYKLIPKNGVYVVQ-TVIDGTTVSGMMNIGYNPTV-SG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               +E   FD  +++YGQ+  +     +R E KF+ IE LK  + +D+  +  IL
Sbjct: 251 KKKSIEIHFFDIDKDLYGQKLQIDLITRIRDEYKFESIEALKNQLAKDKDTSLAIL 306


>gi|313674895|ref|YP_004052891.1| riboflavin biosynthesis protein ribf [Marivirga tractuosa DSM 4126]
 gi|312941593|gb|ADR20783.1| riboflavin biosynthesis protein RibF [Marivirga tractuosa DSM 4126]
          Length = 316

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 173/316 (54%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V    E  + +    K  VV IG FDGIHLGH  I+ + I++A        +++F PH
Sbjct: 1   MIVHDGYENLEGI----KNAVVTIGTFDGIHLGHQEIISRIIELAKSVEGETALVTFWPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++ ++   +  L+    +  IL+++G   ++R  FT E + +++EQFIQ++++  L 
Sbjct: 57  PRYVLGNNQDDLKLLTTFDEKAAILDQLGLDHIVRVHFTKEFSQWTSEQFIQRIIISALH 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G   RFGKDR G    L+K   +YGF    I +   +    +SS+ IR A+  G
Sbjct: 117 TKRLVIGYDHRFGKDREGGFEHLKKHSNRYGFEVEEIPKQTIDD-VGISSTKIRNAIEDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            V  A   LG  + I  +++ G+KIG+TLGF TAN+Q+     ++  +GVYA+    + Q
Sbjct: 176 KVELAHDFLGRYYEINGEIVGGDKIGKTLGFATANIQVEEPYKLVPADGVYAVTAELKGQ 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + N G  PT+       +E+ IFDF+ +IYG++  ++F   LR EIKF     L 
Sbjct: 236 -QYKAMLNIGYRPTV-DGKTKKIEANIFDFNDDIYGEKIKINFIKRLREEIKFDSKAALS 293

Query: 296 IYMGEDEKKARKILES 311
             + +D++KA +IL  
Sbjct: 294 KQLQKDKEKAIQILNQ 309


>gi|299823027|ref|ZP_07054913.1| FAD synthetase [Listeria grayi DSM 20601]
 gi|299816556|gb|EFI83794.1| FAD synthetase [Listeria grayi DSM 20601]
          Length = 312

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 172/316 (54%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   +  E N ++    +  V+A+G FDG+HLGH  ++  A  IA+       VL+F+PH
Sbjct: 1   METIYLHEPN-TIQVEQEPKVIALGFFDGVHLGHQAVIRSAKSIADAAGIKTAVLTFDPH 59

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +  +    L+P   + + +E MG       +FT + +    + F+QK L+  L 
Sbjct: 60  PSVVLSKKRNKAKYLTPIEEKARKVEAMGVDYFYVVRFTTKFSELEPKDFVQKYLLP-LG 118

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
              ++ G  + +G+  AG    ++    +       +D+ +   +Q +SS+ IR A+ +G
Sbjct: 119 AVHIVAGFDYTYGRLGAGKMADMETY-AENKLQVTIVDK-QEADNQKISSTAIRQAIEEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            +  A  LLG  +T +  VIHG+K GRT+GFPTAN+ +  D L  K GVYA++F+  ++T
Sbjct: 177 SMEEANKLLGEPYTTKGTVIHGDKRGRTIGFPTANILVEEDYLIPKLGVYAVKFKIGNET 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G+A+ G N T   +  L +E +I DF++EIYG+   + +F Y RPE+KF  +E L  
Sbjct: 237 HL-GMASIGYNITFKDDQSLSIEVYILDFNREIYGEEVEIEWFQYFRPELKFSGMEGLIK 295

Query: 297 YMGEDEKKARKILESS 312
            + +DE+  R+  + +
Sbjct: 296 QLEKDEQDTREYFQKN 311


>gi|303247308|ref|ZP_07333581.1| riboflavin biosynthesis protein RibF [Desulfovibrio fructosovorans
           JJ]
 gi|302491222|gb|EFL51111.1| riboflavin biosynthesis protein RibF [Desulfovibrio fructosovorans
           JJ]
          Length = 312

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 98/303 (32%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSP 68
             + + L G  + IGNFDG+H+GH  +L++    A  + +  +  +F+PHPR ++  S+ 
Sbjct: 8   ADIHDALNGVCLTIGNFDGVHMGHAKLLQRVCDRAAAASLVSVALTFDPHPRQVLLGSAA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              ++    + + +E  G    +   FT E A    E F+++ LVE L ++ ++ G  + 
Sbjct: 68  PPAITSTEQKLECIEAQGIQVAVVLPFTREVAAREPEDFVREALVEGLSLRHLVIGYDYA 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK R G+  +L   G+  GF    +D +  N +  VSS+ IR  +  G V +A  LLG 
Sbjct: 128 FGKGRRGNFDLLTALGQNLGFTVERLDPVIINGAV-VSSTRIRDMVQAGKVWDARPLLGR 186

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
              +   V HG+K GR LGFPTAN+    +++   GVYA+           GVAN G+NP
Sbjct: 187 FHQVRGLVAHGQKRGRKLGFPTANLSFKDELVPLTGVYAVWVEFGGVIR-PGVANIGKNP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T      + +E+ + DF  +IYG+   V F   +R E KF   ++L   + ED   AR I
Sbjct: 246 TFGE-FEMSVEAHVLDFKGKIYGEPIRVHFVQRIRSEKKFSGPDELAARIREDIGLARMI 304

Query: 309 LES 311
           L +
Sbjct: 305 LAA 307


>gi|29347953|ref|NP_811456.1| riboflavin biosynthesis protein RibF [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339855|gb|AAO77650.1| riboflavin biosynthesis protein ribF, putative riboflavin kinase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 320

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M + +  + +  +P      V  IG FDG+H+GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIN--DTSAMIPE---PCVATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ ++     L+ P  +  +L   G    +   FT + +  +A++F+ ++L E  +V
Sbjct: 56  PRKVMNAAYHPELLTTPEEKTNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERFQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN------KSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G+  G   +      ++      +S  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFDDYVRYGQAIGIEVIRAQAYTDDIQIDTIQSAPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHQGDVDAAARCLGYEYFLDGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+K+  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDS 294

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I++L   + +D ++   IL
Sbjct: 295 IDELIAQLHKDAEETEAIL 313


>gi|253572545|ref|ZP_04849947.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251837960|gb|EES66049.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 320

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M + +  + +  +P      V  IG FDG+H+GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIN--DTSAMIPE---PCVATIGFFDGVHMGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ ++     L+ P  +  +L   G    +   FT + +  +A++F+ ++L E  +V
Sbjct: 56  PRKVMNAAYHPELLTTPEEKTNLLAGTGVDYCLMLDFTPDISRLTAKEFMTQILKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN------KSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G+  G   +      ++      +S  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFDDYVRYGQAIGIEVIRAQAYTDDIQIDTTQSAPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHQGDVDVAARCLGYEYFLDGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+K+  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIGNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKYDS 294

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I++L   + +D ++   IL
Sbjct: 295 IDELIAQLHKDAEETEAIL 313


>gi|326389431|ref|ZP_08210998.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994436|gb|EGD52861.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 316

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++   N    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    +  +   +  +VSSS IR  +  G V  A  LLG  F ++  VIH
Sbjct: 137 TLKKYSKVYSYKVYVVPPV-IREGIVVSSSYIRELIKSGKVEEANSLLGRFFPLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R + +D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIED-KFYIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK  + +D   A+  
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALKEQVFKDINYAKNF 304


>gi|167040278|ref|YP_001663263.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter sp. X514]
 gi|300914362|ref|ZP_07131678.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X561]
 gi|307724402|ref|YP_003904153.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X513]
 gi|166854518|gb|ABY92927.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X514]
 gi|300889297|gb|EFK84443.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X561]
 gi|307581463|gb|ADN54862.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter sp. X513]
          Length = 316

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++   N    V +F  H   I+        ++    +
Sbjct: 17  VIALGNFDGVHIGHQELIKQAIALSKENNLASAVFTFKQHTSKILTPDKQPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI+K+LVE L +K  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTESFSKLTAEEFIKKILVELLNIKIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    +  +   +  +VSSS IR  +  G V  A  LLG  F ++  VIH
Sbjct: 137 TLKKYSKIYSYKVYVVPPV-IREGIVVSSSYIRELIKSGKVEEANSLLGRFFPLQGKVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R + +D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKAGVYVTRVKIED-KFYIAVTNVGSKPTF-GGKSIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES+I D+++ +Y +   V F   +R EIKF+++E LK  + +D   A+  
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFQNLEALKEQVFKDINYAKNF 304


>gi|296171643|ref|ZP_06852857.1| riboflavin biosynthesis protein RibF [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894004|gb|EFG73767.1| riboflavin biosynthesis protein RibF [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 325

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A N P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARNVPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E+MG    +   FT +    + E+++ ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEEMGIDVFLVMPFTSDFMKLTPERYVHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+   L++ GE++GF    +    E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVETLRRAGERFGFAVESMSLLSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVVAAMEALGRPHRVEGVVVRGEGRGMELGFPTANVAPPMYSAIPADGVYAAWFTLLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQYVALDFVARIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + +F  ++ L   MGED ++AR +L +
Sbjct: 297 QTRFDSVQDLIDAMGEDTERARAMLSA 323


>gi|308173630|ref|YP_003920335.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606494|emb|CBI42865.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553438|gb|AEB23930.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           amyloliquefaciens TA208]
          Length = 313

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   + ++G   L   KF    A  S +QF +  ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKISQIGRLGADVLYIVKFDEAFAALSPKQFAEDYIL-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +  + G  F +GK   G    L    +  G       E +  + + +SS+ IR+AL  G
Sbjct: 120 AQHAVGGFDFTYGKYGKGTMATLPD--DLNGKAECTTVEKQTEQDRKISSTYIRSALQDG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L+   I+   GVYA++   +   
Sbjct: 178 DVELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANIGLNNSYIVPPTGVYAVKAEIKG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT     P    +E  +FDF Q++YG+   + ++  +R E KF  I++L
Sbjct: 237 KYEGVCNIGYKPTFYEKRPDQPSIEVHLFDFQQDVYGEDVKIEWYKRIRSERKFNGIDEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +    
Sbjct: 297 TAQIEKDKQEAIRFFSK 313


>gi|310823685|ref|YP_003956043.1| Riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396757|gb|ADO74216.1| Riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
          Length = 307

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 13/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M VFH++   + L     GG +A+GNFDG+H+GH  +  +A     +   +  +F+PHP 
Sbjct: 1   MKVFHSVAEAREL----AGGALALGNFDGVHVGHQALFAEAR---RHGVASAFTFHPHPG 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++Q       ++    + ++ E  G SA +   F+ E A  SA  F + + ++ L +K+
Sbjct: 54  KVLQPDLAPKLITLLPRKLELFEACGLSAAVVQPFSREYARTSAAAFEEAL-LDELGIKS 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G+ F +G  R+G    L +   + G     +  +  +   + SSS +R  + +G V 
Sbjct: 113 LVVGSDFTYGAKRSGTVDTLAEAALRRGARVHKVAPVTVD-GVVASSSRVREYILEGRVG 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---S 237
            A  LLG  F ++  V+ G   GR +GFPTAN+    ++    GVYAIR R +++     
Sbjct: 172 AAHRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVRVKNEPSSPW 231

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G AN G  PT      + +E+ + DFS ++YGQ   V F + LRPE +F  + +L   
Sbjct: 232 RPGAANIGVKPTF-GGSEVTIEAHLMDFSGDLYGQELRVQFLERLRPEQRFGSVAELTGQ 290

Query: 298 MGEDEKKARKILESS 312
           +  D + AR ++  +
Sbjct: 291 IKRDVEAARTVIARA 305


>gi|213646631|ref|ZP_03376684.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
          Length = 286

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 4/277 (1%)

Query: 35  HLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +L+   +       P+ V+ F P P  +  +      L+    +   L + G   ++ 
Sbjct: 6   RALLQGLQEEGRRRGLPVVVMIFEPQPLELFATDKAPARLTRLREKLHYLAQCGVDYVLC 65

Query: 93  YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
            KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF   
Sbjct: 66  VKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVS 125

Query: 153 FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
                       +SS+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN
Sbjct: 126 STQTFCE-GGVRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTAN 184

Query: 213 MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
           + L   +   +GVYA+           GVAN G  PT+       LE  + D   ++YG+
Sbjct: 185 LPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGR 243

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              V     +R E +F  +++LK  +  DE  ARK  
Sbjct: 244 HIDVILRKKIRNEQRFASLDELKAQIARDELTARKFF 280


>gi|258516327|ref|YP_003192549.1| riboflavin biosynthesis protein RibF [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780032|gb|ACV63926.1| riboflavin biosynthesis protein RibF [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 311

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 8/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V+++ +    L        + +GNFDGIH+GH  ++   + +A        V++F PH
Sbjct: 1   MDVYYSRQG--LLKEKYNQIYLGLGNFDGIHIGHQKLISDLVDVARQRGGVPAVMTFYPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++Q +     L   + +++ +E +G   L+   F  + A  + + FI+ +L   L V
Sbjct: 59  PLAVLQPAEAPLMLLSQTNKQEFMEGLGVEVLLVMPFDRDFACLAPDTFIKDILYGELGV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  + FG    G   +L+  G  YGF    +  +   + Q+V+S+ IR  + KG 
Sbjct: 119 KGVFVGYNYTFGCRGLGTPDLLKSYGGTYGFDVHVVPPVCVGE-QVVNSTLIRGLIEKGE 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           V NAA  LGY   I+ +V++GE+ G TLGFPTAN++L  D+++ + GVYA+         
Sbjct: 178 VGNAAKFLGYVPFIQGEVVYGERRGNTLGFPTANLELDSDLVVPDNGVYAVHVELGGCK- 236

Query: 238 YSGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  VAN G  PT     G   LE  + DFS ++YGQ   VSF   LR E +F  + +L  
Sbjct: 237 YPAVANIGTKPTFHGFAGARCLEVHLLDFSADLYGQTIKVSFIRRLRGEKRFNSVGELVA 296

Query: 297 YMGEDEKKAR 306
            +  D  +AR
Sbjct: 297 QIKTDIGEAR 306


>gi|170782208|ref|YP_001710541.1| riboflavin kinase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156777|emb|CAQ01940.1| riboflavin kinase (FAD synthetase) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 310

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 7/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V H+      +P       V IG FDG+H GH  ++ +   I         V++F+ H
Sbjct: 1   MLVVHD---PADVPGGFGPSAVTIGKFDGVHAGHRAVIRRLLGIAEEEGLSSAVVTFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  ++   +L     + ++L ++G  A +   F       S E+F++ VLV+ L  
Sbjct: 58  PAALLAPAARPQSLVSNRQKIELLAELGVDATLMLPFDERLQRLSPEEFVRTVLVDALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AGD   L + GE +GF TV + ++  + S+ VSS+ IR  + +G 
Sbjct: 118 RVVLVGEDFRFGAQGAGDAATLTRLGEVHGFRTVVVGDVMPDGSRKVSSTWIRDLMDRGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA LLG    +   V+HGEK GR LGFPTAN+    + ++  +GVYA   R  D+T 
Sbjct: 178 VEAAAELLGRAPAVRGVVVHGEKRGRELGFPTANLSPEAEGLIPADGVYAGWLRDGDRT- 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT     P ++E+F+ D + ++Y     V F   +R  + ++  E L   
Sbjct: 237 YPSAISVGTNPTFAGVRPRVVEAFVLDQTLDLYDHEVEVVFVARIRGMVAYEGREPLIAQ 296

Query: 298 MGEDEKKARKILES 311
           M +D  + R +L +
Sbjct: 297 MTDDVVRTRALLGA 310


>gi|332185355|ref|ZP_08387103.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. S17]
 gi|332014333|gb|EGI56390.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. S17]
          Length = 312

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 111/311 (35%), Positives = 169/311 (54%), Gaps = 4/311 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII 63
            ++  + +P  L GG+VA+GNFDG HLGH  ++  A+  A     P  V +F+PHP  + 
Sbjct: 3   RLDGAKPVPASLAGGIVALGNFDGFHLGHQAVVGAAVARARAEWRPALVATFDPHPVRLF 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +  +  F L+    + ++    G  A++ ++F    A  +A  F+++ L+  L++  V+T
Sbjct: 63  KPDAEPFRLTSLEQRARLFAAAGVDAMMVFRFDAALAALTARAFVEERLLGDLKIGGVVT 122

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FG+ R+G    L+  G + GF +  +  +  ++ + VSS+ IR  L  G   +AA
Sbjct: 123 GEDFTFGRGRSGTVATLRDWGRELGFSSDAVAPVALDR-ETVSSTRIRQHLIAGEPRDAA 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   F IE  V HG+K+GRT+G+PTAN+ +   +    G+YA+R R  D     G AN
Sbjct: 182 RLLTRPFAIEGVVQHGDKLGRTIGYPTANLDMGDYLRPAYGIYAVRGRLDDGRVLDGAAN 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  P   P    LLE + FDF  ++YGQR +V   DYLRPE KF  ++ L   M  D  
Sbjct: 242 LGIRPQFDPPKE-LLEPYFFDFQGDLYGQRLSVELIDYLRPEAKFDSLDALVAQMDADCA 300

Query: 304 KARKILESSYP 314
           +AR IL S  P
Sbjct: 301 RARTILSSHNP 311


>gi|260910881|ref|ZP_05917524.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634989|gb|EEX53036.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 304

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 100/303 (33%), Positives = 164/303 (54%), Gaps = 7/303 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTL 72
            +    V  IG FDG+HLGH  +++   ++A    ++  V++F  HPR ++Q+S     L
Sbjct: 4   ANTPPCVATIGFFDGVHLGHRYLIDHVRQLAQAQGMSSKVVTFGTHPRQVVQTSFVPKLL 63

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S P  + K+L + G    +   F L  A  +A +F+Q++L E L V  ++ G   +FG +
Sbjct: 64  STPEEKLKLLHETGIDHTMVLNFDLNMAALTAREFMQRILKERLNVAQLVIGYDNKFGHN 123

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R       ++ G+  G H V   +   + +  +SSS IR  L +G V  A  LLGY +++
Sbjct: 124 REESFEDYRRHGQAMGIHVVEASQFAPDGAH-ISSSAIRNHLLEGRVKQANALLGYNYSL 182

Query: 193 ESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT-SYSGVANFGRNPT 249
              V+ G + GR +GFPTAN+ +     +L + GVYA     +       G+ N G  PT
Sbjct: 183 GGKVVPGFQEGRKMGFPTANLLVENPQKLLPQNGVYATLVEVEGYEHPLMGMTNIGNRPT 242

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               G + +E+ I DFS +IYGQ   V+F + +R E+KF  I++LK  M EDE+ AR+++
Sbjct: 243 FNGKG-VTIETNILDFSADIYGQNMRVAFVERIRAEVKFSTIDELKAKMKEDEEAARQLI 301

Query: 310 ESS 312
           +++
Sbjct: 302 QNT 304


>gi|91217232|ref|ZP_01254193.1| riboflavin biosynthesis protein RibF [Psychroflexus torquis ATCC
           700755]
 gi|91184575|gb|EAS70957.1| riboflavin biosynthesis protein RibF [Psychroflexus torquis ATCC
           700755]
          Length = 312

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 173/315 (54%), Gaps = 13/315 (4%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
           M +++N+ E + S+       VV IG FDG+H+GH  I+++ I  A N  +   +L+F P
Sbjct: 1   MKIYNNVSEFDSSIQ-----TVVTIGTFDGVHMGHRKIIKRLIDSAENGHLQTALLTFYP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR ++Q S  +  ++    ++ ILE+ G   LI + FT++ +  SA ++++++LV+ L 
Sbjct: 56  HPRMVLQQSEDLKLINTIEERKLILEETGLEHLIVHPFTMDFSRLSAREYVEEILVKSLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G    FG++R  +   L++ G+++ F  + I + ++ +   VSS+ IR +L  G
Sbjct: 116 AKKIVIGYDHHFGRNRTANIEDLKEFGKEFDFEVLEISK-QDIEDVAVSSTKIRRSLEDG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            + +A   L   F +  +++ G+ +G+ +G+PTANM +     ++ K+GVY         
Sbjct: 175 DLESANTYLSLPFFLSGEIVRGKGLGKNMGYPTANMDIKESYKLIPKQGVYVAASVINGD 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G+ N G NPT+       +E+F FD  +++YGQ   +     +R E+KF  ++ L 
Sbjct: 235 KHF-GMMNIGTNPTV-GGKDRSIETFFFDLDKDLYGQHLHIQLLKRIRSEVKFDGLDALI 292

Query: 296 IYMGEDEKKARKILE 310
             M  DE  A+  ++
Sbjct: 293 EAMNADEVFAKNYIK 307


>gi|255655326|ref|ZP_05400735.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63]
 gi|296451311|ref|ZP_06893051.1| possible FAD synthetase [Clostridium difficile NAP08]
 gi|296880337|ref|ZP_06904300.1| possible FAD synthetase [Clostridium difficile NAP07]
 gi|296259917|gb|EFH06772.1| possible FAD synthetase [Clostridium difficile NAP08]
 gi|296428578|gb|EFH14462.1| possible FAD synthetase [Clostridium difficile NAP07]
          Length = 309

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 93/304 (30%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +I+   ++    K  V+ IGNFDG+H GH +++ + ++ A   N    V +F  H
Sbjct: 1   MEIIKSIKEIANI----KESVITIGNFDGVHKGHQVLIGKTVEHAKKENIQSIVFTFANH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    + +S    +     + K+LE +G   ++   F        A+ F+ ++LV+ L+ 
Sbjct: 57  PVNYFRPNS-TKNIISNDDKIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F F + + G+  +L+    ++GF    I  ++ N    VSS+ IR+ +++G 
Sbjct: 116 KKIVIGHDFTFARAKEGNVNLLKSLEHEFGFEVEVIKPIKIND-VRVSSTYIRSLVSQGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           + +    LG  + +E  VIH + +GRT+GFPTAN+ L  ++L  K G+YA      D+T 
Sbjct: 175 MASVKEYLGRNYKLEGCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     L +E+ I +F ++IYG+   V F + +R E KF  I+ LK  
Sbjct: 234 YFGATNVGYNPTVN-GKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLKNQ 292

Query: 298 MGED 301
           +  D
Sbjct: 293 LYND 296


>gi|118617701|ref|YP_906033.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium ulcerans Agy99]
 gi|118569811|gb|ABL04562.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ +G FDG+H GH  ++  A+K   A   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRARGVPTVMMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + ++FI ++L E L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRFIHELLFEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG    L+  GE++GF       + E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGSVDTLRHAGERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ G   G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVMAATEALGRPHRVEGVVVRGYGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPVTGAVIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVALDFVARIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF  + +L   +G D ++ R +L +
Sbjct: 297 QKKFASVPELVAEIGADTERTRVLLST 323


>gi|153806062|ref|ZP_01958730.1| hypothetical protein BACCAC_00313 [Bacteroides caccae ATCC 43185]
 gi|149130739|gb|EDM21945.1| hypothetical protein BACCAC_00313 [Bacteroides caccae ATCC 43185]
          Length = 328

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 92/328 (28%), Positives = 161/328 (49%), Gaps = 16/328 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +I   +  P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDISAIKPEP-----CVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ ++     L+ P  +  +L  +G    +   FT + +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNAAYRPELLTTPKEKISLLADIGVDYCLMLDFTPDISQLTAREFMNRLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+         G++ G   +         E+   ++  VSSS IR 
Sbjct: 116 KCLVIGYDHRFGHNRSEGFEDYVCYGKEIGIEVIRAQAYTSDIEIGTTRNIPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  L Y + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHEGEVEIAARCLKYEYFLDGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F   IY +   ++F    RPE+KF  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSNIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILESSYPLSER 318
           I++L + + +D ++   IL +S   S +
Sbjct: 295 IDELIVQLHKDAEETEAILLASKARSNQ 322


>gi|163753731|ref|ZP_02160854.1| bifunctional protein: riboflavin kinase; FAD synthetase [Kordia
           algicida OT-1]
 gi|161325945|gb|EDP97271.1| bifunctional protein: riboflavin kinase; FAD synthetase [Kordia
           algicida OT-1]
          Length = 310

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 5/298 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              + IG FDG+H+GH  I+E  I  +      +L+F PHPR ++Q  + I  ++    +
Sbjct: 15  PSAITIGTFDGVHVGHKKIIENLIAKSEGLDTMLLTFFPHPRMVLQQDANIKLINTIDER 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++LE  G + LI Y F  + +   A  F++  L+  L +K +I G   RFG++R  +  
Sbjct: 75  IQLLEATGLNTLIIYPFNRKFSRLKASDFVRDFLIAHLNLKKIIIGYDHRFGRNRTANID 134

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++ GE + F    I   +      +SS+ IR AL +G +  A   LGY F +   VI 
Sbjct: 135 DLREFGEAFDFKVEEIQA-KEIDDVTISSTKIRKALNEGDIATANAYLGYEFMLTGTVIS 193

Query: 199 GEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G+ +G T+ FPTAN+ +  D  ++ K+GVY ++    ++T + G+ N G NPT+      
Sbjct: 194 GKGLGNTINFPTANIHIKEDYKLIPKQGVYFVKSMIDEKTVF-GMMNIGTNPTVA-GKKQ 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +E   FDF ++IY ++  V   + LR E KF  + +L+  + +D++ + +++++ + 
Sbjct: 252 TIEVHFFDFDRDIYNEKIQVRLIERLRDEQKFDSVTQLQAQLQKDKQTSLQLIQNYHA 309


>gi|115376302|ref|ZP_01463542.1| riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366727|gb|EAU65722.1| riboflavin biosynthesis protein RibF [Stigmatella aurantiaca
           DW4/3-1]
          Length = 307

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 13/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M VFH++   + L     GG +A+GNFDG+H+GH  +  +A     +   +  +F+PHP 
Sbjct: 1   MKVFHSVAEAREL----AGGALALGNFDGVHVGHQALFAEAR---RHGVASAFTFHPHPG 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++Q       ++    + ++ E  G SA +   F+ E A  SA  F + + ++ L +K+
Sbjct: 54  KVLQPDLAPKLITLLPRKLELFEACGLSAAVVQPFSREYAXTSAAAFEEAL-LDELGIKS 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G+ F +G  R+G    L +   + G     +  +  +   + SSS +R  + +G V 
Sbjct: 113 LVVGSDFTYGAKRSGTVDTLAEAALRRGARVHKVAPVTVD-GVVASSSRVREYILEGRVG 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---S 237
            A  LLG  F ++  V+ G   GR +GFPTAN+    ++    GVYAIR R +++     
Sbjct: 172 AAHRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVRVKNEPSSPW 231

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G AN G  PT      + +E+ + DFS ++YGQ   V F + LRPE +F  + +L   
Sbjct: 232 RPGAANIGVKPTF-GGSEVTIEAHLMDFSGDLYGQELRVQFLERLRPEQRFGSVAELTGQ 290

Query: 298 MGEDEKKARKILESS 312
           +  D + AR ++  +
Sbjct: 291 IKRDVEAARTVIARA 305


>gi|320159700|ref|YP_004172924.1| riboflavin kinase/FMN adenylyltransferase [Anaerolinea thermophila
           UNI-1]
 gi|319993553|dbj|BAJ62324.1| riboflavin kinase/FMN adenylyltransferase [Anaerolinea thermophila
           UNI-1]
          Length = 309

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 9/309 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
            +I      P       + +G+FDG+H GH  +L    + A+ +     V++F PHP  +
Sbjct: 2   KHIRSLDEFPR--GRTYLTVGSFDGVHRGHQGLLSALAQAAHQAGAQSAVVTFFPHPVAV 59

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           ++  S  + L+ P  + +++ + G   ++   FT E A  SA +F+  +  E   ++++ 
Sbjct: 60  LRGLSQPYYLTSPEERARLMGECGIDVVLTLPFTRELAALSAREFVTLLR-EKAGMESLW 118

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F  G++R G+   LQ+ GE+ GF    +  +       VSSS IR AL +G V++A
Sbjct: 119 VGYDFALGRNREGNVPALQRLGEELGFTVHVLPPVALED-IPVSSSLIRAALEQGDVVSA 177

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGV 241
           A +LG  +TIE  V+HG+  GRTL  PT N+   +   L   GVYA R   +       V
Sbjct: 178 ARMLGRPYTIEGAVVHGDARGRTLNIPTINISFWAEQRLPAFGVYACRVEVEGLV-LDAV 236

Query: 242 ANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           AN G  PT   PNG + LE+ + DFS ++Y +   + F  +LRPE +F+ +E L   + +
Sbjct: 237 ANIGIRPTFANPNGEVRLEAHLLDFSGDLYDRTVRLQFVAFLRPERRFESVEALVAQIQQ 296

Query: 301 DEKKARKIL 309
           D + AR++L
Sbjct: 297 DIQHAREVL 305


>gi|258539780|ref|YP_003174279.1| riboflavin biosynthesis protein ribF [Lactobacillus rhamnosus Lc
           705]
 gi|257151456|emb|CAR90428.1| Riboflavin biosynthesis protein RibF [Lactobacillus rhamnosus Lc
           705]
          Length = 315

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V       Q+     +  V+ +G FDG+H GH  +++  + + +A   P+ V++F+ H
Sbjct: 1   MKVIDIQPPLQASAAPPQPIVLTLGFFDGVHRGHQAVIQAGKRVALAKKLPLAVMTFDMH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +    + I  LS    +  ++++ G   L    FT   A  S + F+   LV  L
Sbjct: 61  PAIVYRGVAKTAIRYLSTREEKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   V+ G  + + K    +  +L +      F  V + +L  +  + +SS+ IR AL +
Sbjct: 120 KAAAVVAGFDYTYSKRAVANMALLPEYARGR-FEVVSVPKLAED-GKKISSTRIRDALDR 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HGE  GR LGFPT N+  L    L   G+YA+  +  D 
Sbjct: 178 GDIDTANELLGYVYLTTGKVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKVDD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y G+A+ GRN T   +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L 
Sbjct: 237 TWYLGMASIGRNVTFGDDRAVTLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFAGADALI 296

Query: 296 IYMGEDEKKARKILE 310
             +  DE+  R+   
Sbjct: 297 AQLKTDEQTVRQYFR 311


>gi|188575771|ref|YP_001912700.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188520223|gb|ACD58168.1| riboflavin biosynthesis protein RibF [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 320

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 5/301 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+HLGH  +++ A+  A     P   +SF P PR     ++P   L+    + 
Sbjct: 2   VCIGAFDGLHLGHRTLVQHAVARARALSVPAVAVSFEPLPREFFAPAAPPPRLTLARAKI 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L   G  ++   +F    +  SAE F+   LV  L  + V  G +FRFG  R GD G+
Sbjct: 62  EGLYGFGADSVGMIRFDGRLSKMSAEDFVHLALVGRLCAREVWIGPEFRFGHRRGGDIGL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L   GE++GF    I  +  +  + +S++ IR  L  G   +A  LLG  + I   V+ G
Sbjct: 122 LHTLGEQHGFVAGEIAPVHLH-GERISATRIRELLVAGEFAHAGDLLGRPYAIGGRVVRG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRTLG+PTAN++  P      G+YA       +T +  V++FG  PT+    P LLE
Sbjct: 181 KQLGRTLGYPTANLRF-PRTPALSGIYATWVHGVAETPWPSVSSFGTRPTVAGVEP-LLE 238

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
           + +FDF  ++YG+   V F   LR E KF  +E L + M  D ++AR +L +S      D
Sbjct: 239 AHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALTVQMHRDAEQARAVLAASPSQEPED 298

Query: 320 R 320
            
Sbjct: 299 N 299


>gi|312143660|ref|YP_003995106.1| riboflavin biosynthesis protein RibF [Halanaerobium sp.
           'sapolanicus']
 gi|311904311|gb|ADQ14752.1| riboflavin biosynthesis protein RibF [Halanaerobium sp.
           'sapolanicus']
          Length = 307

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 126/312 (40%), Positives = 173/312 (55%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  + E   +   +    V+AIG FDG+H GH LI+E+ I+ A     P  VLSFNPH
Sbjct: 1   MQIITS-ENYDNFREN--NSVIAIGAFDGLHKGHQLIIEKCIETAKLNQLPSAVLSFNPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I   +P   L     +  ILE MG       KF  E A  SA +F++ +L E L++
Sbjct: 58  PLEVIPDQTPPPALVSRKQKLSILENMGLDYYFEQKFDEEFAGLSAVEFVENILTEKLKL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G+ FRFGK+   +  IL K  + +GF T  I +L  N+ + +SS+ IR  L KG 
Sbjct: 118 DTVVVGSDFRFGKNNEANVEILNKLADIHGFKTKIISQLNANEDR-ISSTRIRNLLQKGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  F I   V+HG+KIGR LGFPTAN++L S  +L   GVYA+    + Q  
Sbjct: 177 LNKAEELLGRPFQICGRVVHGKKIGRKLGFPTANLKLESDYVLPPLGVYAVEVHYKGQ-R 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + G AN G NPT         E FI DF  ++Y +R  V   +Y+RPE +F D+E+LK  
Sbjct: 236 FCGAANIGDNPTFNGVNT-SFEIFILDFKDKLYQKRLCVDLVEYIRPEKEFADVEELKEQ 294

Query: 298 MGEDEKKARKIL 309
           M +D    RKIL
Sbjct: 295 MRKDVLYTRKIL 306


>gi|56419802|ref|YP_147120.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           kaustophilus HTA426]
 gi|56379644|dbj|BAD75552.1| riboflavin kinase (flavokinase); FAD synthetase (FAD
           pyrophosphorylase) [Geobacillus kaustophilus HTA426]
          Length = 328

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 9/301 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTL 72
             L   V+A+G FDGIHLGH  ++  A++IAN       V++F+PHP  ++   S + ++
Sbjct: 17  QALPPTVMALGYFDGIHLGHQKVIRTAVEIANERGYESAVMTFHPHPSVVLGKQSELRSI 76

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   +E+++  +G + L   +FT   A  S E F+ +  ++ L VK V+ G  F +G+ 
Sbjct: 77  TPLGKKEQLIASLGVNRLYIVEFTPTFAALSPEAFVDQY-LDGLHVKHVVAGFDFTYGRF 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    +     +  F    I +L  +  + VSSS +R  L  G V     LLG  + +
Sbjct: 136 GKGTMETMP-IHARGRFGQTVIPKLAVD-GEKVSSSRVRKLLEDGAVEQLPRLLGRFYEL 193

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  V+ GE+ GR +GFPTAN+ L+ D  L   GVYA++     Q  Y GVAN G  PT  
Sbjct: 194 EGTVVAGERRGRMIGFPTANIALNSDYALPAVGVYAVKAVIGGQV-YEGVANVGYKPTFH 252

Query: 252 PNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   +E  +F+FS +IYGQ  T+ +   LR E KF  +++L   +  D+K+A +  
Sbjct: 253 KTREGLPNIEVHLFEFSGDIYGQTMTIEWHRRLRSEQKFTSVDELTAQIARDKKEAEQYF 312

Query: 310 E 310
            
Sbjct: 313 R 313


>gi|225012232|ref|ZP_03702669.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-2A]
 gi|225003787|gb|EEG41760.1| riboflavin biosynthesis protein RibF [Flavobacteria bacterium
           MS024-2A]
          Length = 312

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 166/313 (53%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V ++I+  +S     K  ++ IG FDGIH+GH  IL+  +  A    +   VL+F PH
Sbjct: 1   MKVVNDIKNYRS----DKKSILTIGTFDGIHIGHQKILKSLVAQAKKENLLANVLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  S I  +     +E  L K+G   LI + F++  +  +A +FIQ +LV+ L++
Sbjct: 57  PRMVLQKESQIKLIDTLKEREDFLRKLGVDNLIIHPFSVAFSKLTALEFIQNILVKQLKI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            ++  G   RFG++R      L+  G++Y F    I   +   +  VSS+ IR A+  G 
Sbjct: 117 DSLYIGYDHRFGRNREATVEDLKSYGQQYDFKVNIISAQQI-ATIAVSSTKIREAIALGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFRTQDQT 236
            +   H LG  F +   V  GE IGR L FPTAN+   +   I+  +GVY +    +   
Sbjct: 176 FVKVHHFLGRPFQLRGTVTKGEGIGRKLAFPTANLNVNIPYKIIPPQGVYLVSILLEKGV 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N G  PT+       +E  IFDF++++YG+  TV  ++ +R E KF  +E LK 
Sbjct: 236 FY-GMMNIGTRPTLSGKNE-SIEIHIFDFNEDLYGKMITVCLYEKIRDERKFDSLEALKT 293

Query: 297 YMGEDEKKARKIL 309
            + +D+KK ++ L
Sbjct: 294 QLIKDKKKCKRTL 306


>gi|220920433|ref|YP_002495734.1| riboflavin biosynthesis protein RibF [Methylobacterium nodulans ORS
           2060]
 gi|219945039|gb|ACL55431.1| riboflavin biosynthesis protein RibF [Methylobacterium nodulans ORS
           2060]
          Length = 338

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 115/297 (38%), Positives = 160/297 (53%), Gaps = 5/297 (1%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
              + +P  L+G V AIGNFDG+H GH  ++    +IA     P  VL+F PHPR     
Sbjct: 26  RDGEPVPEGLRGAVAAIGNFDGLHRGHRALIAAVREIAAAAGRPSAVLTFEPHPREFFAP 85

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
              +F L+    +  +L ++G   +   +F    A  SA  F+ ++L + L +  V+ G 
Sbjct: 86  DVGMFRLTDEGAKLAVLARLGIDGVFVRRFDAALAGTSAAAFVGRLLKDELGLTGVVIGH 145

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKGHVLNAAH 184
            F FG+ R G   +LQ    ++G     I+ +     +  VSSS IR AL  G V  A  
Sbjct: 146 DFHFGRGREGTPAVLQALCAEHGLTCRVIEPVAAECGEVPVSSSAIRAALEAGDVAGANR 205

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG+R+ ++  V HG+K GRTLGFPTAN+ L P   L  G+YA+R R  D     GVA++
Sbjct: 206 LLGFRWFVQGVVRHGDKRGRTLGFPTANVAL-PACGLAHGIYAVRVRLADGALREGVASY 264

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           GR PT   NG  LLE+ +FDFS ++YGQR  V F  +LR E +F   E L   M ED
Sbjct: 265 GRRPTF-DNGAPLLETTLFDFSGDLYGQRIAVEFVGFLRGEARFDSAEALVAQMHED 320


>gi|319892290|ref|YP_004149165.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161986|gb|ADV05529.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464613|gb|ADX76766.1| riboflavin biosynthesis protein RibF [Staphylococcus
           pseudintermedius ED99]
          Length = 323

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 170/319 (53%), Gaps = 13/319 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+  Q +   +    +A+G FDG+H GH  + ++   +    +    V++F+PH
Sbjct: 4   IEITHPIQAEQYIQEDV---AMALGFFDGLHRGHQALFDELDRVAKEKDLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   + ++L +      +   F+   A  + ++F+Q  LV+   
Sbjct: 61  PSVVLNPKQKRTTYITPLDDKIELLGEQNIDYCLVVNFSSRFAEVTPDEFVQDYLVKN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + +I G  F FGK   G+  +LQ+   +  F ++ I + ++   + +S++ IR AL  G
Sbjct: 120 ARVIIAGFDFTFGKYGKGNMAMLQEYQAQ--FESITIGK-QDLNREKISTTAIREALKTG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
           H+  A   LGYR+ ++  V+ GEK GRT+GFPTAN++ S D +    GVYA+        
Sbjct: 177 HLAKANEQLGYRYRMKGTVVQGEKRGRTIGFPTANIEPSDDYVWPTLGVYAVSMTIGSSD 236

Query: 237 S-YSGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             Y GVAN G  PT   + P  ++E  IFDF++ IYG+R T+ +  Y+RPE+KF  I+ L
Sbjct: 237 QIYRGVANIGVKPTFHDDLPQAVIEVNIFDFTENIYGERVTIYWHHYIRPELKFDGIDPL 296

Query: 295 KIYMGEDEKKARKILESSY 313
              M +D+ +A+ +L   +
Sbjct: 297 VAQMNDDKARAKHLLAVDF 315


>gi|298369469|ref|ZP_06980786.1| riboflavin biosynthesis protein RibF [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282026|gb|EFI23514.1| riboflavin biosynthesis protein RibF [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 308

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++          P+ V+ F P P+        
Sbjct: 8   ANAPDFPQGAAVTIGNFDGVHLGHKHILQKLKHEADLRGLPVAVVIFEPQPKEFFARKAG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
               + +SP   + ++L + G   A+   +F    A+ +A+ FI ++L   L  + ++ G
Sbjct: 68  KKLPYRISPLRTKLRLLRETGCVDAVWVLRFDQSFADMTAQTFIDRLLRRTLNTRYLLIG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G +  A
Sbjct: 128 DDFRFGAGREGCFELLSQQPDIQTERTPSVIVEDIRT------SSTAVRQALSDGLLEYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGKVKHGQKLGRTINAPTANIQLPPYHYALSGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+  N    LE  +FDF  ++YGQR  V F   LR E KF  IE+LK  + +D 
Sbjct: 241 SFGFNPTVSNNRSQKLEVHLFDFDGDLYGQRIFVRFLHKLRDEQKFDSIEELKTQILQDM 300

Query: 303 KKARKI 308
             AR+ 
Sbjct: 301 DDARRW 306


>gi|171057922|ref|YP_001790271.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptothrix
           cholodnii SP-6]
 gi|170775367|gb|ACB33506.1| riboflavin biosynthesis protein RibF [Leptothrix cholodnii SP-6]
          Length = 345

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 157/350 (44%), Gaps = 34/350 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M VF         P       + IGNFDG+H GH  +L   Q        P  VLSF PH
Sbjct: 1   MQVFRG----YHHPGLAAACALTIGNFDGVHRGHQAMLALLQNEARHRGLPSCVLSFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       ++    +   LE+ G   ++  +F    A  S + FI +VLV
Sbjct: 57  PRDFFATVSGKPGLAPARIATLRDKLGELERCGVDQVVLMRFDARFAALSPQAFIDEVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  F FG  RAGD  +L   G   GF    +     + ++ VSSS +R A
Sbjct: 117 QGLGARYVLVGDDFCFGAKRAGDYAMLDAAGSAAGFDVARMMSYEVHGTR-VSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           LT G +   A LLG  ++I   V+HG K+GR+L         GF T N++ +       G
Sbjct: 176 LTGGDMARVAELLGRPYSISGHVVHGRKLGRSLGETTIGAADGFRTLNVRFTHGKPAANG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI-----YGQRCTVSFF 279
           +YA+R     +    GVA+ G  PT+   G +LLE+F FD+  ++     YG+   V   
Sbjct: 236 IYAVRVSGLTEQPLEGVASLGVRPTVEDAGRVLLETFCFDWPAQLGAEGGYGKIARVELL 295

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILE--------SSYPLSERDRI 321
             LR E ++  ++ L   +G+D   AR   E        +    + RDRI
Sbjct: 296 CKLRDEARYDGLDALTAAIGQDIANARAYFERIAAAGHAAERRQTTRDRI 345


>gi|167630363|ref|YP_001680862.1| riboflavin biosynthesis protein ribf [Heliobacterium modesticaldum
           Ice1]
 gi|167593103|gb|ABZ84851.1| riboflavin biosynthesis protein ribf [Heliobacterium modesticaldum
           Ice1]
          Length = 320

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 5/305 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDG+HLGH  ++ + +K A        V +F+PHP  +I+  +    ++P  ++ 
Sbjct: 15  VALGNFDGVHLGHQKLITEMVKKARASQGTAVVATFHPHPLRLIRPEAAPKLITPMDVKA 74

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L ++G   ++   F  + A  S E+F+Q+VL + L  + V+ G  + FG+   G   +
Sbjct: 75  GLLGRLGVDIVLILPFNPDLAKLSPEEFVQQVLHQDLRAELVLVGFNYSFGRGGKGTPEL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G + G     ID +     + VSS+ +R AL KG +  AA LLGY   +   V+ G
Sbjct: 135 LWELGHRLGVRVRVIDAVTI-AGEPVSSTAVRAALEKGDIERAADLLGYMPILRGPVVPG 193

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGPLL 257
           ++ GR +GF TAN++L P+  L   GVYA   R+         V N G  PT        
Sbjct: 194 DQRGRNIGFRTANIELPPEQYLPARGVYAAWVRSVSLSEGILAVVNIGVKPTFGTGLAET 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           +E+ + DF  ++YGQ  T+     +RPE++F+  E+L   +  D +  R    +      
Sbjct: 254 VEAHLIDFEGDLYGQTLTLHLLRRMRPEMRFQSPEQLVEQIHRDLQDTRHFFHAQQEHIF 313

Query: 318 RDRII 322
            +RII
Sbjct: 314 ANRII 318


>gi|91789692|ref|YP_550644.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Polaromonas
           sp. JS666]
 gi|91698917|gb|ABE45746.1| FMN adenylyltransferase [Polaromonas sp. JS666]
          Length = 341

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 157/346 (45%), Gaps = 30/346 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF      +  P    G  + IGNFDG+H GH  +L            P  V+SF PH
Sbjct: 1   MKVFRGYHHPELAP----GCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       ++    +   L + G    +   F    ++ + E FIQ VLV
Sbjct: 57  PRDYFAAVARKPELAPARIATLRDKLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  K V+ G  FRFG  RAGD  +L   GE+ GF    ++    + ++ VSSS +R A
Sbjct: 117 QGLGTKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSYEVHGTR-VSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +G +   A LLG  ++I   V+HG K+GR LGF T N++ S       G++A+     
Sbjct: 176 LGEGRMDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRP 284
                 GVAN G  P++ PN    G +LLE++  ++   +     YG+   V     L  
Sbjct: 236 ADQPLPGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHD 295

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPLS---------ERDRI 321
           E+K+  ++ L+  + +D   AR     ++  S          RDRI
Sbjct: 296 ELKYDSLDSLQAGIAKDCDDARAFFAQAFSASMHTETSRQTTRDRI 341


>gi|224476400|ref|YP_002634006.1| putative riboflavin kinase / FAD synthase RibC [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421007|emb|CAL27821.1| putative riboflavin kinase / FAD synthase RibC [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 324

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 14/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+  Q +   +    +A+G FDG+H GH  +      I    N    V++F+PH
Sbjct: 4   IEITHPIQPEQYIKEDV---AMALGFFDGLHKGHAQVFHALNEIAEKKNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +ILE      +I   FT + A+ S E+F+++ LVE   
Sbjct: 61  PSVVLNPKQKRTDYLTPLSDKIEILEAYDIDYVIIVNFTSKFADCSIEEFVEQYLVEN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +L++  E +    V   E+    S+ +S++ IR AL +G
Sbjct: 120 VKEVIAGFDFTFGKHGKGNMSVLKELKEHFNTTVVSKQEMY---SEKISTTEIRRALKEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
           ++  A   LGYR+ I+  V+ GEK GRT+GFPTAN++     +L K+GVYA+      + 
Sbjct: 177 NLKKANEELGYRYRIKGTVVQGEKRGRTIGFPTANIEPSDDYVLPKKGVYAVSLAIGAEQ 236

Query: 237 S-YSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GV N G  PT        +++E  IFDF ++IYG+R  V +  YLRPEIKF  I+ 
Sbjct: 237 RIYRGVCNVGVKPTFHDPKKSHVVIEVNIFDFDEDIYGERVVVFWHHYLRPEIKFDGIDP 296

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+++A+ +L   +
Sbjct: 297 LVEQMNKDKEQAKYLLSVDF 316


>gi|333024098|ref|ZP_08452162.1| putative bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Tu6071]
 gi|332743950|gb|EGJ74391.1| putative bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces sp. Tu6071]
          Length = 314

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 9/308 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP 68
           + +P      VV IG++DG+H GH LI+ +A+  A    +   V++F+PHP  +++  S 
Sbjct: 2   EDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVDRARELGLRSVVVTFDPHPSEVVRPGSH 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + +++  +G  AL+   FT E +  S   F + VL E L  K V+ G  FR
Sbjct: 62  PPLLAAHHRRAELMADLGVDALLILPFTTEFSRLSPADFARTVLTERLHAKVVVEGPNFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTALTKGHVLNAAHL 185
           FG   AG+  +L + G +  F    +D   +      Q  SS+  R  + +G V  AA +
Sbjct: 122 FGHKAAGNVTMLAELGREDDFEVDLVDLYVSGDAGAGQPFSSTLTRRLVAEGDVAGAAEI 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANF 244
           LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA      D  +     + 
Sbjct: 182 LGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAVPADGVYAGWLHVAD-EAMPAAISV 240

Query: 245 GRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP         +E++  D    ++YG    V F  Y+R   KF  I++L   M +D K
Sbjct: 241 GTNPQF-DAKHRTVEAYAIDRVGLDLYGLHVAVDFLAYVRGMEKFASIDELLTAMADDVK 299

Query: 304 KARKILES 311
           ++R ++  
Sbjct: 300 RSRALIAE 307


>gi|319645946|ref|ZP_08000176.1| RibC protein [Bacillus sp. BT1B_CT2]
 gi|317391696|gb|EFV72493.1| RibC protein [Bacillus sp. BT1B_CT2]
          Length = 298

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/299 (32%), Positives = 152/299 (50%), Gaps = 10/299 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF-TLSPPSIQ 78
           +A+G FDG+HLGH  ++  A           +V++F+PHP  +++        ++P   +
Sbjct: 1   MALGYFDGVHLGHQQVILTAKNTAAREGVKTSVMTFHPHPSAVLKKGREPKDLITPLQDK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I+E +G   L    FT E A+ S E+FI + ++ +  V  V+ G  F FGK   G   
Sbjct: 61  ISIIEDLGVDFLYVVTFTPEFASLSPEEFIDQYILGF-HVTHVVAGFDFTFGKFGKGTME 119

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             Q+  +     T       +N+ Q VSS+ IR+ L  G V  AA LLG  + ++  VIH
Sbjct: 120 NFQEYAKGRVKSTSV--AKYSNQDQKVSSTRIRSVLGAGDVEYAAELLGRPYHVKGFVIH 177

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN--GP 255
           G+K GRT+GFPTAN+ L    I+   GVYA++        Y+GV N G  PT      G 
Sbjct: 178 GDKRGRTIGFPTANIGLKDTYIVPPTGVYAVKAEIGG-AVYNGVCNVGYKPTFYEKRPGQ 236

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             +E  +FDF ++IYG    V ++  LR E KF  +++L   +  D+++A +      P
Sbjct: 237 PSIEVNLFDFDRDIYGSEIKVEWYKRLRSEKKFGSVDELVEQISRDKEEAIRFFRERKP 295


>gi|320352888|ref|YP_004194227.1| FMN adenylyltransferase [Desulfobulbus propionicus DSM 2032]
 gi|320121390|gb|ADW16936.1| FMN adenylyltransferase; riboflavin kinase [Desulfobulbus
           propionicus DSM 2032]
          Length = 323

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/315 (31%), Positives = 161/315 (51%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++ ++     +        V IGNFDG+HLGH  + +Q +  A         ++F+PH
Sbjct: 1   MEIYTDLN---DILQPFTRAHVTIGNFDGVHLGHQKLFDQVVARARQDKGTSVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     I  +S    + +++E+ G   L+   F  E A  +A +F+ +VL+  + +
Sbjct: 58  PLKVLSP-QGIRLISTTPQKIELIERAGIDVLVIIPFNREVAVTTAVEFVDQVLLGRVGM 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  +  GK R GD   LQ++G++ GF  + +      +  +VSSS IR  +  G 
Sbjct: 117 RDLVVGYDYAMGKGRQGDTAFLQRQGQEKGFSVMVMPA-HYEQGMLVSSSRIRELVAAGK 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           + +   LLG  + I  DV  G + G   LGFPTAN+ LS  D+  K GVY +     D  
Sbjct: 176 MRDVRRLLGRWYQIRGDVQWGRQRGGKLLGFPTANLNLSEEDLCPKRGVY-VTQVIYDGR 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV+N G NPT    G L+ E+ IFDF+ +IYG+   ++   +LR EI F   + L  
Sbjct: 235 QYGGVSNIGYNPTFGDTG-LVAETHIFDFNADIYGRPLKINLLRHLRGEIAFSGPDALAR 293

Query: 297 YMGEDEKKARKILES 311
            +  D + A+K+L  
Sbjct: 294 QIHRDIEVAQKVLAK 308


>gi|326333604|ref|ZP_08199843.1| riboflavin biosynthesis protein RibF [Nocardioidaceae bacterium
           Broad-1]
 gi|325948620|gb|EGD40721.1| riboflavin biosynthesis protein RibF [Nocardioidaceae bacterium
           Broad-1]
          Length = 306

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 154/307 (50%), Gaps = 7/307 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSP 68
             +P  L    V IGNFDG+HLGH  ++ +  ++A   +  +  ++F+PHP  +++    
Sbjct: 2   SEVPAGLGRTCVVIGNFDGVHLGHQHVISRGREVADAKDLTLVAVTFDPHPMAVLRPEHA 61

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++L   G  A++   F ++ AN+S + F Q+VLV+ L  +  + G  FR
Sbjct: 62  PGVLTTMEERSELLHAAGADAVLALPFDMDMANWSPDDFAQRVLVDALHAEACVVGANFR 121

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           +G   AGD   L   G+ + F    I    +   Q+ SS+ IRT L  G V  AA  LG 
Sbjct: 122 YGCKAAGDVADLIAYGKIHDFSAEGIP--LDGGPQVWSSTYIRTCLATGDVTGAAEALGR 179

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-TSYSGVANFGR 246
            +++   V+ G++ GR LGFPTAN+       +  +G+YA     +D    +    + G 
Sbjct: 180 PYSVRGVVVKGDQRGRELGFPTANVPTDSLTAVPPDGIYAGWLTRRDTGERFPAAISVGT 239

Query: 247 NPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NPT        +ES++ D    E+YG    V+F + LR  + F+ I  L   M  D ++A
Sbjct: 240 NPTFEGVVGRRVESYVLDRDDLELYGVEVEVAFVERLRGMVAFEGIGALVEQMHADVERA 299

Query: 306 RKILESS 312
           R+IL  S
Sbjct: 300 RQILTES 306


>gi|332799228|ref|YP_004460727.1| riboflavin biosynthesis protein RibF [Tepidanaerobacter sp. Re1]
 gi|332696963|gb|AEE91420.1| riboflavin biosynthesis protein RibF [Tepidanaerobacter sp. Re1]
          Length = 308

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/313 (34%), Positives = 168/313 (53%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M ++H +   Q            IGNFDGIH GH  ++++ ++     N    + +F PH
Sbjct: 1   MKIYHELSSLQIANC----TACGIGNFDGIHKGHQKLIKELLRSSQLRNIDSLIFTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ S + +  +  P+ +++I++  G    I   FTLE +  + + FI  +L+     
Sbjct: 57  PSKVLSSDNNVKFIMTPNQKQQIMKSYGIDHFILAPFTLEFSRINYKDFIYDILINKCNA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  +RFG    G    L++   K G  T+ I  ++  K QI+SS+ IR  + KG 
Sbjct: 117 KVIVVGYNYRFGYKSEGTAHTLKEICHKEGIDTIIIPPVKY-KGQIISSTFIRNLIEKGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           + +AA  LG  FT+E  V HG  IG+ LGFPTAN+    + IL   GVYA+  R +D   
Sbjct: 176 MKSAAEFLGRPFTVEGFVQHGNGIGKKLGFPTANILPEQELILPPRGVYAVLVRWKDNI- 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT   +  + LE+ +F+FS+++YG++  V F D LR EIKF   E L + 
Sbjct: 235 YKGVANLGIKPTFNGDS-IWLETHLFNFSKKLYGEKLEVMFIDNLRREIKFNTAEALAMQ 293

Query: 298 MGEDEKKARKILE 310
           +  D  +A +IL+
Sbjct: 294 IQNDFIRAMEILK 306


>gi|260175192|ref|ZP_05761604.1| riboflavin biosynthesis protein ribF, putative riboflavin kinase
           [Bacteroides sp. D2]
 gi|315923424|ref|ZP_07919664.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697299|gb|EFS34134.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 315

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +       P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDTSAITPEP-----CVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      L+ P  +  +L  +G    +   FT E +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNAEYRPELLTTPEEKISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +         ++ N  +  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAKAYTSNIKIGNEPNIPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AAH L Y + ++  V+ G ++GR +GFPTAN+++     ++  +GVYA+  
Sbjct: 176 LLHEGEVSLAAHCLKYEYFLDGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+KF  
Sbjct: 235 VTFDGETYMGMLNIGVRPTIDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILES 311
           I++L   + +D ++   IL+ 
Sbjct: 295 IDELITQLHKDAEETETILKK 315


>gi|212704223|ref|ZP_03312351.1| hypothetical protein DESPIG_02278 [Desulfovibrio piger ATCC 29098]
 gi|212672427|gb|EEB32910.1| hypothetical protein DESPIG_02278 [Desulfovibrio piger ATCC 29098]
          Length = 303

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 8/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   V IGNFDG+H GH +++ +A+  +    +   V++F PHPR +     P   L+  
Sbjct: 10  RATAVTIGNFDGVHQGHQVLIRRALTYSQQFGLDCVVITFWPHPRVLF--GKPHQPLTSR 67

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L+ +G   ++   FT E A  S E+F+++ L+  L +K ++ G  F  G+ R+G
Sbjct: 68  AARMRLLQGLGDLRVLELPFTHELAALSPEEFVRQHLLP-LRLKHLVIGHDFTLGRGRSG 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L+  GEKYGF    +  +      +VSS+ +R  + KG V  AA LLG+ +  E  
Sbjct: 127 QPDVLRSLGEKYGFDVDQLPPV-EVGGHVVSSTCLRELIGKGDVATAASLLGHAYGCEGL 185

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNG 254
           V+HGE  G  LGFPTAN+ +   +L   GVYA R            V N GR PT    G
Sbjct: 186 VVHGEGRGTGLGFPTANIAIPDTMLPAPGVYATRVVVPHLGRTLQAVTNIGRKPTFGDYG 245

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            L +ESF+ D    +YG    + F   LR E +F+  + L   +  D  +AR +L
Sbjct: 246 -LSIESFLLDTDLNLYGNELRLDFVARLRDEKRFESADALVAQIRTDVARARDLL 299


>gi|256832254|ref|YP_003160981.1| riboflavin biosynthesis protein RibF [Jonesia denitrificans DSM
           20603]
 gi|256685785|gb|ACV08678.1| riboflavin biosynthesis protein RibF [Jonesia denitrificans DSM
           20603]
          Length = 315

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 88/319 (27%), Positives = 157/319 (49%), Gaps = 13/319 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M+V+ ++E   +   H    VV IGNFDG+H GHH++++  I       +    ++F+PH
Sbjct: 1   MNVWWSLEEALA---HRAPSVVTIGNFDGVHRGHHMVIDAVIAEARRRQACAVAMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L+  + + ++L ++G  A+   +++LE A  S   F++  +V+ L  
Sbjct: 58  PAHVHRPEQAAPLLTGLTDRLELLAQLGLDAVCVVEYSLEFAQQSPRDFVKTWIVDALAA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
             V+ G   RFG+D +GD   L+  G+++GF  V +D+  +    +  SSS +R  +  G
Sbjct: 118 TAVVIGRDVRFGRDNSGDLSTLRDLGQEFGFDVVVVDDHGSPGGGERWSSSIVRQLVRGG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            +     LLG    +   V+HG+  GR LGFPTAN+    D ++  +GVYA         
Sbjct: 178 EMGAVTQLLGRPHRMRGVVVHGDARGRELGFPTANLSPDSDGMVPADGVYAGYVSVVGGQ 237

Query: 237 S----YSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDI 291
                     + G NPT        +E+++    + ++Y +   V F + LRP + F  +
Sbjct: 238 RALQGLPAAISVGTNPTF-DGQERRVEAYVIGHNNLDLYDKNIMVEFVERLRPTVTFSSL 296

Query: 292 EKLKIYMGEDEKKARKILE 310
           + L   M +D  +A+ +L 
Sbjct: 297 DALIDQMHDDVTRAKLLLR 315


>gi|306794276|ref|ZP_07432578.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu005]
 gi|308369856|ref|ZP_07419306.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu002]
 gi|308372390|ref|ZP_07428514.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu004]
 gi|308326222|gb|EFP15073.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu002]
 gi|308333385|gb|EFP22236.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu004]
 gi|308337409|gb|EFP26260.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu005]
          Length = 324

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+   L++ GE++GF       + E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYATWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF+ + +L   MG D ++AR +L +
Sbjct: 297 QKKFESVRQLVAAMGADTERARDLLST 323


>gi|261380480|ref|ZP_05985053.1| riboflavin biosynthesis protein RibF [Neisseria subflava NJ9703]
 gi|284796728|gb|EFC52075.1| riboflavin biosynthesis protein RibF [Neisseria subflava NJ9703]
          Length = 308

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 18/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M+++      +  P   +G  V IGNFDG+HLGH  IL++  +       P+ V+ F P 
Sbjct: 1   MNIWLG---QRHPPQFPQGAAVTIGNFDGVHLGHKHILQKLKREADRRGLPVVVVIFEPQ 57

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P+            + +SP   + ++L + G   A+   +F    +  SA+ FI ++L +
Sbjct: 58  PKEFFARKAGKKLPYRISPLRTKLRLLRETGCVDAIWVLRFNQTFSEMSAQTFIDRLLRK 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRT 172
            L  + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R 
Sbjct: 118 TLNTRYLLIGDDFRFGAGREGCFELLAQQPDMQTECTPSVIVEDIRT------SSTAVRQ 171

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+ G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +    
Sbjct: 172 ALSDGKLEYAKKLLGHDYVLSGKVKHGQKLGRTINSPTANVQLPPYHYALSGVFVVEADG 231

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T   GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE
Sbjct: 232 AFGTR-RGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIE 290

Query: 293 KLKIYMGEDEKKARKI 308
            LK  + +D + A+  
Sbjct: 291 ALKTQILQDMEDAKVW 306


>gi|237722878|ref|ZP_04553359.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293373422|ref|ZP_06619777.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CMC 3f]
 gi|299147553|ref|ZP_07040617.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_23]
 gi|229447400|gb|EEO53191.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631560|gb|EFF50183.1| riboflavin biosynthesis protein RibF [Bacteroides ovatus SD CMC 3f]
 gi|298514340|gb|EFI38225.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_23]
          Length = 315

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +       P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDTSAITPEP-----CVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+ P  +  +L  +G    +   FT E +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNVEYHPELLTTPEEKISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +         E+ N  +  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAKAYTSNIEIGNEPNIPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AAH L Y + ++  V+ G ++GR +GFPTAN+++     ++  +GVYA+  
Sbjct: 176 LLHEGEVSLAAHCLKYEYFLDGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+KF  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILES 311
           I++L   + +D ++   IL+ 
Sbjct: 295 IDELITQLHKDAEETETILKK 315


>gi|227504835|ref|ZP_03934884.1| FAD synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198526|gb|EEI78574.1| FAD synthetase [Corynebacterium striatum ATCC 6940]
          Length = 341

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 20/326 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHP 59
            +++ I+   S+P       V IG FDG+H GH  ++  A+    A      +++F+PHP
Sbjct: 5   DIWYGID---SIPGDFGPTAVTIGVFDGVHRGHQQLINNAVSYARAEELRTVMVTFDPHP 61

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +        ++     + ++ E+MG  A++   FT E    + + +++ ++V  L  +
Sbjct: 62  VAVFLPERAPLSVVTFERRLQLAEEMGIDAVLVIDFTKELVGTTPQHYVEDLIVGKLHAR 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FG   +G    + + G+ +GF    +  L ++    + S+NIR  L  G +
Sbjct: 122 HVVVGENFTFGAGASGTADAMVEFGKTHGFSVDVV-PLLDDAGVRICSTNIRANLAAGEI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRF------- 230
             A   LG  F++   V+ G   G   LGFPTAN      + +  +GVYA  F       
Sbjct: 181 AKANWALGRHFSVTGPVVRGAGRGGKELGFPTANQYFPDSVAIPADGVYAGWFILEPAEA 240

Query: 231 ----RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                     +Y+   + G NPT   +    +ESF+ D   ++YG   TV F D+LR  +
Sbjct: 241 PVEGNMDHGMAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGHVATVKFVDHLRDMV 299

Query: 287 KFKDIEKLKIYMGEDEKKARKILESS 312
           KF  +E+L   M  D  KAR++L   
Sbjct: 300 KFNSVEELLDAMAADVAKAREVLAED 325


>gi|225075659|ref|ZP_03718858.1| hypothetical protein NEIFLAOT_00675 [Neisseria flavescens
           NRL30031/H210]
 gi|224953081|gb|EEG34290.1| hypothetical protein NEIFLAOT_00675 [Neisseria flavescens
           NRL30031/H210]
          Length = 308

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 18/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M+++      +  P   +G  V IGNFDG+HLGH  IL++  +       P+ V+ F P 
Sbjct: 1   MNIWLG---QRHAPKFPQGAAVTIGNFDGVHLGHKHILQKLKREADQRGLPVVVVVFEPQ 57

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P+            + +SP   + ++L + G   A+    F    ++ SA+ FI ++L +
Sbjct: 58  PKEFFARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLCFNQAFSDMSAQAFIDQLLRQ 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRT 172
            L  + ++ G  FRFG  R G   +L ++ +     T  V ++++R       SS+ +R 
Sbjct: 118 TLNTRYLLIGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQ 171

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           AL+ G +  A  LLG+ + +   V HG+K+GRT+  PTAN+QL P      GV+ +    
Sbjct: 172 ALSDGKLEYAKRLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVEADG 231

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T   GVA+FG NPT+  N    LE  +FDF+ ++YGQR  V F   LR E KF+ IE
Sbjct: 232 TFGTR-RGVASFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIE 290

Query: 293 KLKIYMGEDEKKARKI 308
            LK  + +D + A+  
Sbjct: 291 ALKTQILQDMEDAKVW 306


>gi|15839010|ref|NP_299698.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa 9a5c]
 gi|9107607|gb|AAF85218.1|AE004051_2 riboflavin biosynthesis protein [Xylella fastidiosa 9a5c]
          Length = 315

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 109/311 (35%), Positives = 168/311 (54%), Gaps = 8/311 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  + +S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNER-ISATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIAL-SGIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F DI+ +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDIQSMTTQIHR 297

Query: 301 DEKKARKILES 311
           D ++AR IL  
Sbjct: 298 DAQQARHILSE 308


>gi|154686084|ref|YP_001421245.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           amyloliquefaciens FZB42]
 gi|154351935|gb|ABS74014.1| RibC [Bacillus amyloliquefaciens FZB42]
          Length = 313

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 156/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   + ++G   L   KF    A+ S +QF ++ ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKISQIGRLGADVLYVVKFDEAFASLSPKQFAEEYIL-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQK-RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  + G  F +GK   G    L      K G  TV   E +  + + +SS+ IR+AL  
Sbjct: 120 ARHAVGGFDFTYGKYGKGTMETLPDDLNGKAGCTTV---EKQTEQDRKISSTYIRSALQD 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ 235
           G V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L    I+   GVYA++   +  
Sbjct: 177 GDVELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANVGLHNSYIVPPTGVYAVKAEIKG- 235

Query: 236 TSYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GV N G  PT     P    +E  +F+F Q++YG+   + ++  +R E KF  I++
Sbjct: 236 EVYEGVCNIGYKPTFYEKRPDQPSIEVHLFNFQQDVYGEDVKIEWYKRIRSERKFNGIDE 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   +G+D+++  +    
Sbjct: 296 LTAQIGKDKQETIRFFSK 313


>gi|95928776|ref|ZP_01311522.1| riboflavin biosynthesis protein RibF [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135121|gb|EAT16774.1| riboflavin biosynthesis protein RibF [Desulfuromonas acetoxidans
           DSM 684]
          Length = 324

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 9/326 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V  N+     + +     VV +GNFDG+HLGH  I    ++ A N      V +F PH
Sbjct: 1   MKVIRNL---SEIDHPFDHAVVTLGNFDGVHLGHREIFRSVVESARNEGGTSIVCTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ +      ++ P  +E+++       L+   FT E A    EQF+ ++L+E + +
Sbjct: 58  PLKLLAADRAPRLINTPQERERLIGASCVDVLLVLPFTPELAALDPEQFVDQILIERIGL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + FGK R+G    L+++G++ GF       ++  + Q++SS+ +R  +  G 
Sbjct: 118 KHLVVGYDYAFGKGRSGSIEFLREQGQRKGFIVDVFGPVQ-KQGQVISSTRVRQHVLSGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     LLG  F  E  V+HG+  G  LGF TAN+    +++   GVYA          Y
Sbjct: 177 VEGVVALLGRHFNFEGQVVHGDGRGHNLGFATANLATEKELIPASGVYACIAMVHG-KEY 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V + G   T   + PL +E+ +FDF +++Y Q   + F   LR +  F D + L   +
Sbjct: 236 KSVVSIGCKTTFGDH-PLTIEAHLFDFKEDVYDQTMRLYFVKKLRNQKTFSDKDALIGAI 294

Query: 299 GEDEKKARKILESSYPLSERDRIICF 324
            +D  +A   LE +  +  R+  + F
Sbjct: 295 EQDVTEAHHCLERTRIIEYRE-YLTF 319


>gi|328911771|gb|AEB63367.1| bifunctional riboflavin kinase FAD synthase [Bacillus
           amyloliquefaciens LL3]
          Length = 313

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHISHPHHLQKEEQPASVMALGYFDGVHLGHRKVIGTARQIAEEKGLSLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   + ++G   L   KF    A  S +QF +  ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKISQIGRLGADVLYIVKFDEAFAALSPKQFAEDYIL-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +  + G  F +GK   G    L    +  G       E +  + + +SS+ IR+AL  G
Sbjct: 120 AQHAVGGFDFTYGKYGKGTMATLPD--DLNGKAECTTVEKQTEQDRKISSTYIRSALQDG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I   VIHG+K GRT+GFPTAN+ L+   I+   GVYA++   +   
Sbjct: 178 DVELAHTLLGQPYFIRGTVIHGDKRGRTIGFPTANIGLNNSYIVPPTGVYAVKAEIKG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT     P    +E  +FDF Q++YG+   + ++  +R E KF  I++L
Sbjct: 237 KYEGVCNIGYKPTFYEKRPDQPSIEIHLFDFQQDVYGEDVKIEWYKRIRSERKFNGIDEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +    
Sbjct: 297 TAQIEKDKQEAIRFFSK 313


>gi|160883656|ref|ZP_02064659.1| hypothetical protein BACOVA_01628 [Bacteroides ovatus ATCC 8483]
 gi|156111069|gb|EDO12814.1| hypothetical protein BACOVA_01628 [Bacteroides ovatus ATCC 8483]
          Length = 315

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 16/321 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +       P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDTSAITPEP-----CVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+ P  +  +L  +G    +   FT E +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNVEYRPELLTTPEEKISLLADIGVDYCLMLDFTPEISRLTAREFMTQLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +         E+ N  +  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAKAYTSNIEIGNEPNIPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AAH L Y + ++  V+ G ++GR +GFPTAN+++     ++  +GVYA+  
Sbjct: 176 LLHEGEVSLAAHCLKYEYFLDGIVVGGYQVGRKIGFPTANLRVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+KF  
Sbjct: 235 VTFDGKTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILES 311
           I++L   + +D ++   IL+ 
Sbjct: 295 IDELITQLHKDAEETETILKK 315


>gi|329667125|gb|AEB93073.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           DPC 6026]
          Length = 312

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   K  ++ +G FDG+H+GH  +++  + I    N P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKNLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT E +  S + F+ +V V  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETEQEKERKMEKLGVDYLVIIKFTQEFSQLSPQDFVDQV-VMKLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G  + +G     +   L K  +      + ++  +      V S+ IR A+  G+
Sbjct: 119 DTIVVGFDYTYGPKDIANVENLPKFAKDRFK--IVVEPKQAIDKIKVGSTYIRKAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAAELLGQPYETSGIIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKVNG-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFDFDEEAYGKPLTLAWYKFIRKNKKFSGIEELSHQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRDIKQYF 307


>gi|325299239|ref|YP_004259156.1| riboflavin biosynthesis protein RibF [Bacteroides salanitronis DSM
           18170]
 gi|324318792|gb|ADY36683.1| riboflavin biosynthesis protein RibF [Bacteroides salanitronis DSM
           18170]
          Length = 306

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +     I+   P         IG FDG+H GH  +++Q  +  +A      +++F  H
Sbjct: 1   MEI-----ISAESPFAFPPCAATIGCFDGVHRGHRYLIDQVRREALARGLHSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++QS      L+    ++++L++      I   FT E +  SA +F++ +L     V
Sbjct: 56  PRQVMQSGYCPQWLTCLPQKKELLQQEDADYCILLPFTHELSLLSARRFME-LLHTRFNV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+         G++ G   +    L  +    +SSS IR  L +G 
Sbjct: 115 QALVIGYDHRFGHNRSEGFEDYCCYGKELGMEVIHAQALEED-GLSISSSLIRNLLKEGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  A   LGYR+ ++  V+ G ++GR LGFPTAN+Q      ++ KEGVYA+    +   
Sbjct: 174 VARANRYLGYRYYLDGQVVSGYQVGRKLGFPTANLQPSCPDKLVPKEGVYAVYAYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+G+ N G  PT+       +E  +  F   +Y     V F  Y+R E KF+ IE L  
Sbjct: 233 RYAGMLNIGSRPTIGNGTERSIEVHLIGFEGNLYQHALRVEFMQYIREEQKFEGIEALIA 292

Query: 297 YMGEDEKKARKILE 310
            + +D+    ++L 
Sbjct: 293 QLQQDKATIIRLLS 306


>gi|312888475|ref|ZP_07748048.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM
           18603]
 gi|311299052|gb|EFQ76148.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM
           18603]
          Length = 307

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 170/314 (54%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++++I+  + + N     VV IG FDG+H GH  I+ +  ++A        +L+F PH
Sbjct: 1   MKIYNSIDEFKLITN----AVVTIGTFDGVHTGHRKIIAKLQELAQECGGETVILTFFPH 56

Query: 59  PRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR I+      +  ++  + + ++LE +G   LI   F+ + +N SA ++I  +LV  + 
Sbjct: 57  PRMILNPEDQSLKMITTINEKAELLEGLGVDHLIVTPFSRDFSNLSALEYIHDILVAKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K ++ G   RFGKDR G    LQ+  + Y F  + I E ++     VSS+ IRTAL   
Sbjct: 117 IKKIVIGYDHRFGKDRKGGLEDLQRLSKIYDFEVIEIPE-QDINDVAVSSTKIRTALLSD 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            +  A   L Y F I   VI G++IGR +G+PTAN+ +     ++  +G++A+    +  
Sbjct: 176 DISLANQFLSYPFFITGKVIRGDQIGRQIGYPTANILIEETYKLIPADGIFAVTVEVEGA 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y G+A  G  PT+       +E  IFDF ++IY Q   ++F  ++R +IKF  +++LK
Sbjct: 236 T-YKGMAYIGHRPTIN-GMTRNIEVNIFDFDRDIYNQSIRMNFHYFVRSDIKFNSLDELK 293

Query: 296 IYMGEDEKKARKIL 309
           + + +D +    +L
Sbjct: 294 LQLAKDRESVLALL 307


>gi|254974860|ref|ZP_05271332.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26]
 gi|255092247|ref|ZP_05321725.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932]
 gi|255313987|ref|ZP_05355570.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55]
 gi|255516667|ref|ZP_05384343.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34]
 gi|255649766|ref|ZP_05396668.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79]
 gi|260682922|ref|YP_003214207.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260686520|ref|YP_003217653.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
 gi|306519871|ref|ZP_07406218.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58]
 gi|260209085|emb|CBA62236.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260212536|emb|CBE03493.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
          Length = 309

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/304 (30%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +I+   ++    K  V+ IGNFDG+H GH +++ + ++ A   N    V +F  H
Sbjct: 1   MVIIKSIKEIANI----KESVITIGNFDGVHKGHQVLIGKTVEYAKKENIQSIVFTFANH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    + +S    +     + K+LE +G   ++   F        A+ F+ ++LV+ L+ 
Sbjct: 57  PVNYFRPNS-TKNIISNDDKIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F F + + G+  +L+    ++GF    I  ++ N    VSS+ IR+ +++G 
Sbjct: 116 KKIVIGHDFTFARAKEGNVNLLKSLEHEFGFEVEVIKPIKIND-VRVSSTYIRSLVSQGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           + N    LG  + +E  VIH + +GRT+GFPTAN+ L  ++L  K G+YA      D+T 
Sbjct: 175 MANVKEYLGRNYKLEGCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     L +E+ I +F ++IYG+   V F + +R E KF  I+ LK  
Sbjct: 234 YFGATNVGYNPTVN-GKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLKNQ 292

Query: 298 MGED 301
           +  D
Sbjct: 293 LYND 296


>gi|68536213|ref|YP_250918.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium jeikeium K411]
 gi|68263812|emb|CAI37300.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           jeikeium K411]
          Length = 326

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 157/330 (47%), Gaps = 26/330 (7%)

Query: 1   MHVFHNIEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M +++ ++    +P HL   G VV IG FDG+H GH  +L++A+++A     P  + +F+
Sbjct: 1   MSIWYGLD---RIPEHLAAGGTVVTIGVFDGVHRGHQQLLQRAVELARERGVPSVMFTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP  + +  +    LS    + ++  + G   ++   FT + A++S E+++ +VLV+ L
Sbjct: 58  PHPTVVFKPDAVPPLLSSVRRRAELAHEYGIDHVVVVSFTKQIASWSPEEYVDQVLVKML 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  F FG   AG    L++ G   G     + EL  +   +V S+ IR AL +
Sbjct: 118 NAKAVVVGDNFTFGHKAAGTPETLRELGAARGMRVDVL-ELLEDGDHVVCSTWIRQALAE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           G+V  A   LG  F +  +V H   + GR LGFPTAN+  +    L  +GVYA       
Sbjct: 177 GNVDGANEALGRHFRVAGEVTHGAGRGGRALGFPTANLYFAEKFALPADGVYAGYVTILP 236

Query: 235 ---------------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
                                  + G NPT   + P  +ESFI D   ++YG    V F 
Sbjct: 237 GHGISTGATIGTMPVGERLPAAISVGTNPTF-GHEPRSVESFILDHDADLYGLDIAVEFV 295

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +LR    +  +++L   +G D    RK L
Sbjct: 296 HHLRGMETYNSLDELIEAIGRDVTDTRKAL 325


>gi|218290092|ref|ZP_03494254.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239801|gb|EED06990.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 325

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 151/315 (47%), Gaps = 13/315 (4%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFT- 71
           P      V+AIG FDG+HLGH  IL  A  +      + V+SF PHP   +  +      
Sbjct: 11  PASPAPQVLAIGKFDGVHLGHRAILNAARGLLAPEERLAVMSFEPHPTYALTGNPEYARW 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   + ++  ++G  A    +F           F+   LV  L V+ V+ G  FRFG+
Sbjct: 71  LTPRRERVRLFTELGVDAFYVARFDRAFQQLEPAAFVDGYLVP-LRVRHVVVGPDFRFGR 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              G   +L+  G + GF    +  +  +    +SSS IR  L +G V  A  LLG  + 
Sbjct: 130 GGQGTVDVLRDLGRERGFDVQVVQPVEEH-GHKISSSRIREHLREGRVEAAQALLGRPYV 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSY-----SGVANFG 245
           I  +V+HG+K GRT+GFPTAN+  +   +L K GVYA     ++          GV N G
Sbjct: 189 ISGEVVHGDKRGRTIGFPTANLGGIDAYVLPKTGVYAAFVEVEEADHACSAHAFGVLNAG 248

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+       LE  + DF  ++YG+   VSF   +R E+KF+ +E LK  +  D + A
Sbjct: 249 YRPTV-DGRAFQLEVHLLDFDGDLYGKTLRVSFLRRIRDEMKFESLEALKAQIARDCEVA 307

Query: 306 RKI--LESSYPLSER 318
           R +  L S  P   R
Sbjct: 308 RALVGLSSGAPAERR 322


>gi|220912205|ref|YP_002487514.1| riboflavin biosynthesis protein RibF [Arthrobacter chlorophenolicus
           A6]
 gi|219859083|gb|ACL39425.1| riboflavin biosynthesis protein RibF [Arthrobacter chlorophenolicus
           A6]
          Length = 327

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 22/326 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           ++H+      +P      VV  GNFDG+H GH  +L Q I+ A   +S    ++F+PHP 
Sbjct: 4   IWHD---PSEVPADFGPSVVTFGNFDGVHRGHQQVLSQLIRSARLTHSKAVAVTFDPHPA 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            I +  S    +     + + L ++G  A++  K++L+ A+ +AE+F+++ LV+ L    
Sbjct: 61  VIHRPESAPRLIMGLEDKLEALGELGLDAILVVKYSLDLASLTAEEFVEQYLVDCLHASH 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---------SQIVSSSNIR 171
           V+ G   RFG+  +GD   ++  G K+GF    I E  +            +  SS+ +R
Sbjct: 121 VVIGHDARFGRGNSGDLETMKALGGKFGFEVQVISEFGSEGYPLHDDDGTDRRCSSTWVR 180

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRF 230
            AL +G V  AA +LG    +  +V+HG   GR LGFPTAN+      ++  +G+YA   
Sbjct: 181 EALQEGDVATAAEVLGRAHRMRGEVVHGAARGRALGFPTANLASDSTGLIPADGIYAGWL 240

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRP 284
             +    +    + G NPT        +E+ + D  +      ++YGQ   V F   LR 
Sbjct: 241 VDEAGKRWPAAISVGSNPTFDGVS-RQVEAHVIDRPREAVEDFDLYGQTVIVEFVARLRG 299

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILE 310
            + ++  E L   M  D  +A ++L 
Sbjct: 300 MVAYRGPEALVDQMKLDVVQAHQLLA 325


>gi|333029620|ref|ZP_08457681.1| riboflavin biosynthesis protein RibF [Bacteroides coprosuis DSM
           18011]
 gi|332740217|gb|EGJ70699.1| riboflavin biosynthesis protein RibF [Bacteroides coprosuis DSM
           18011]
          Length = 309

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +     I++         V +IG FDG+H GH+ +++Q +      +    +L+F  H
Sbjct: 1   MQI-----IDKKSNTIPSPCVASIGFFDGVHKGHYYLIKQVLAEANRRDLKSALLTFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  + +  L+    + ++L K          FT E +  +A +F+Q +L +   V
Sbjct: 56  PAKVMRPDTVMEHLTIRDEKLELLAKTSVDYCFLIDFTKELSQLTAREFMQFILKDKYNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G   RFG +R        + G++ G   +      ++ S  VSSS IR A+  G 
Sbjct: 116 KVLVIGYDHRFGHNREEGFEDYCRYGKELGIEVIQAKAFYDD-SVDVSSSYIRKAIDAGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQD-Q 235
           VL A   LGY + +E  VI G+++GRT+GFPTAN+ +     ++ K+GVYA++   +D Q
Sbjct: 175 VLLAEQYLGYPYFLEGKVIQGKQLGRTIGFPTANVNVSSPDKLIPKDGVYAVKVLVEDNQ 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ N G  PT+       +E  I DF+++IY +   + F   LR E+KF  I+KL 
Sbjct: 235 EEYWGMLNIGHRPTVDDGPNRSIEVNILDFNKDIYNKSIRLLFKHRLRDEVKFSSIDKLV 294

Query: 296 IYMGEDEKKARKILE 310
             +  DE+  RK+++
Sbjct: 295 EQLHRDEESVRKLIK 309


>gi|89101189|ref|ZP_01174020.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. NRRL B-14911]
 gi|89084098|gb|EAR63268.1| bifunctional flavokinase/FAD synthetase [Bacillus sp. NRRL B-14911]
          Length = 318

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 10/322 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V      +Q       G  +A+G FDG+HLGH  ++ +A K          V++F+PH
Sbjct: 1   MEVIAIKHPHQFARTDFPGLSMALGYFDGVHLGHQKVILEAKKAAEQKGLKSAVMTFDPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++  S   I  ++P   + K + K+G   L   +F+   A+   ++F  + L+  L 
Sbjct: 61  PSVVLGKSVQHIEYITPLEDKIKEISKLGADYLFVVEFSSSFASLLPQEFADQYLI-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  + +G+   G    L     +  F    +D+L  + ++ +SS+ IR  + +G
Sbjct: 120 ARHIVAGFDYSYGRMGKGTMETLPFHSREE-FTYTVVDKL-TDGTEKISSTLIRQKIREG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
           H      LLG  +T    VIHG+K GRT+GFPTAN+ + +  I    GVYA R R  D +
Sbjct: 178 HTEELPGLLGRYYTTRGTVIHGDKRGRTIGFPTANIDIGTSYIYPPTGVYAARMRV-DGS 236

Query: 237 SYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              GV N G  PT          +E  +FDFS+EIYG    + +  YLR E KF  +++L
Sbjct: 237 WVEGVCNVGYKPTFNKPAADRPSIEVHLFDFSREIYGSEVEIEWHRYLRSERKFSGVDEL 296

Query: 295 KIYMGEDEKKARKILESSYPLS 316
              +  D+  A    E++  L+
Sbjct: 297 VAQISRDKDAAVGYFENNEGLT 318


>gi|193213429|ref|YP_001999382.1| riboflavin biosynthesis protein RibF [Chlorobaculum parvum NCIB
           8327]
 gi|193086906|gb|ACF12182.1| riboflavin biosynthesis protein RibF [Chlorobaculum parvum NCIB
           8327]
          Length = 321

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 8/312 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           H+ E  Q +    +   V +G+FDG+H+GH  I+   I  A    +   V++F+PHPR +
Sbjct: 12  HDAETGQVVSLKPEPSAVTVGSFDGLHVGHRKIIGTMIDKARQDGLRSVVVTFDPHPRLV 71

Query: 63  IQSSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           ++SSS   +  L+    +      M    L   +F  E +  S+  FI+ VLV+ L  + 
Sbjct: 72  LESSSDCQVQLLTTFDEKVAHFRTMQVDLLFVIRFDREFSRKSSADFIRDVLVKMLGARQ 131

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G    FG DR+G    L++ GE++GF    + E+  + S  VSS+ IR  L +G + 
Sbjct: 132 VTVGYDHGFGSDRSGSGKTLRQLGEEHGFRVEVVGEIIVDGS-PVSSTRIRHLLAEGRIR 190

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQTSY 238
            A   LG  +TI  +V++G+K+GR +GFPTAN++LS     L   GVYA R    D   +
Sbjct: 191 EANVCLGTPYTISGEVVNGKKLGRQIGFPTANLELSDRCKHLPAHGVYAARVTI-DGRDW 249

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             + N GR PT+  +G + +E+ I  FS E+YG    +   D++RPE  F  I++LK  +
Sbjct: 250 PVMMNIGRRPTVEEHGAVTVEAHIVGFSGELYGAVLVLQLLDFIRPEQCFDSIDELKAQL 309

Query: 299 GEDEKKARKILE 310
             D+KKA   L+
Sbjct: 310 LADQKKAELYLK 321


>gi|114799780|ref|YP_759571.1| riboflavin biosynthesis protein RibF [Hyphomonas neptunium ATCC
           15444]
 gi|114739954|gb|ABI78079.1| riboflavin biosynthesis protein RibF [Hyphomonas neptunium ATCC
           15444]
          Length = 308

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 113/302 (37%), Positives = 158/302 (52%), Gaps = 4/302 (1%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + LP   +G  +A+GNFDG+H GH  +++ A    +       +F P PR   +   P F
Sbjct: 8   RGLPQAARGASIALGNFDGLHAGHRAVMDAARTAGHGKFSVA-TFEPPPRAYFRPGDPPF 66

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +  P  +  ++ K G   +    F  E A  + EQF+++VLV+ L V  +  G  FRFG
Sbjct: 67  RILRPERRNALILKAGADTVFELPFNGEMAAMTDEQFVRQVLVDGLGVSHISVGFDFRFG 126

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           + R G    L   G   GF    ++E+ +      SS+ IR AL  G    AA LLG  +
Sbjct: 127 RGRMGHAQRLASLGRALGFGVTIVEEV-SGHGAKASSTAIRQALMAGEPDVAAELLGSPW 185

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPT 249
             +  +  GE+ GRT GFPTANM L   I  K GVYA+R R + +  +  GVANFGR PT
Sbjct: 186 IADGIIEPGEQNGRTFGFPTANMALGDLIHPKMGVYAVRLRIEGEDVWRDGVANFGRTPT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  LLE+FIFDF +EIYG+R  V    Y RPE+KF  ++ +   M  D  KA+ IL
Sbjct: 246 -TGLRDPLLETFIFDFDREIYGERVEVQLIAYQRPELKFPSLDAMIEQMHRDAAKAKDIL 304

Query: 310 ES 311
            +
Sbjct: 305 AA 306


>gi|81428852|ref|YP_395852.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610494|emb|CAI55545.1| Bifunctional enzyme, riboflavin kinase and FMN adenylyltransferase
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 317

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V   I          +  V+A+G FDG+H  H  +++ A ++    N P+ V++F+ H
Sbjct: 1   MRVIELIHPYSKEQVPAEEIVLALGFFDGVHRAHQAVIKTAKELAVQQNRPLAVMTFDIH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + ++   +    LS    +++++  +G   L    F    A  + + F+ + LV  L
Sbjct: 61  PAIVYRNVNQADFRYLSTVERKQELMADLGVDILYVVHFNDGFAKLAPQDFVDQYLV-AL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             KTV+ G  + +GK    +   L    +   F  V + E  + +   + S+ IR  L +
Sbjct: 120 HAKTVVAGFDYTYGKKDIANMQTLSTYAKDR-FEIVTVAE-HDYQGHKIGSTLIRENLDQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LL Y +    +V+HGE  GR LGFPTAN++   P+ L   G+YA+R   + Q
Sbjct: 178 GQVAAANELLSYVYQTTGEVVHGEARGRELGFPTANIESQKPERLPGIGIYAVRLLVRGQ 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ GRN T   N P+ +E  + DFS +IYG++  V ++ YLR E+KF   E L 
Sbjct: 238 -WYWGMASIGRNVTFHANNPVTVEINLLDFSADIYGEQVKVEWYQYLRGEVKFDSAEALI 296

Query: 296 IYMGEDEKKARKILES 311
             + +DE   R   E 
Sbjct: 297 DQLHQDEADTRTYFEK 312


>gi|163786664|ref|ZP_02181112.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteriales bacterium ALC-1]
 gi|159878524|gb|EDP72580.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [Flavobacteriales bacterium ALC-1]
          Length = 298

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/294 (34%), Positives = 161/294 (54%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDGIH+GH  IL++ + +A    +   VL+  PHPR ++Q    I  L+  + +
Sbjct: 8   VTTIGTFDGIHIGHQKILKRVVTLAKKQDLEPVVLTLFPHPRMVLQKDDSIKLLNTINER 67

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L+  G   +I  +FT E AN SA+ +++++LV+ L  K ++ G    FGK+R  +  
Sbjct: 68  VVLLKSFGIKDVIVKEFTKEFANLSAKDYVKQILVDELNTKQIVIGYDHHFGKNRNANIT 127

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++  + Y F    I   ++ +   VSS+ IR AL KG V  A   LGY + I   V+ 
Sbjct: 128 DLKEFAQLYNFRVEEISA-QDIEDVTVSSTKIRNALDKGQVALANSFLGYTYFITGTVVK 186

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G+ IGRT+ FPTAN+ +     ++  EGVY ++ +  D   + G+ N G NPT+      
Sbjct: 187 GKGIGRTIDFPTANIHIKETYKLIPNEGVYVVKSKIDDNIIF-GMMNIGTNPTV-GGETR 244

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +E   F+F+ +IY     + F   LR E KF++IE LK  + +D+K A + ++
Sbjct: 245 SIEVHFFNFNTDIYESELKIEFLKRLRSEQKFENIEALKNQLAKDKKAALEFIK 298


>gi|226939542|ref|YP_002794615.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Laribacter
           hongkongensis HLHK9]
 gi|226714468|gb|ACO73606.1| Riboflavin kinase [Laribacter hongkongensis HLHK9]
          Length = 353

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 99/315 (31%), Positives = 151/315 (47%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQS--LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V    +   +  +        + IGNFDG+HLGH  IL    +     + P  +L+F 
Sbjct: 43  MQVLFGEQAGTAGRIAEAQLPCALTIGNFDGVHLGHQAILRDLREEADRRDLPTALLTFE 102

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHPR +   ++P   L     +   L   G    +   +F    A+ + E FI ++L   
Sbjct: 103 PHPRELFARNNPPARLMTLRDKLDFLASTGLVDRVHVLRFNHGLASLAPEVFIDRILRRL 162

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  + ++ G  FRFG  RAGD   L    +        +  +  +  +  SSS +R AL 
Sbjct: 163 LHARFLLIGDDFRFGARRAGDFSTLAALPD---IEVRAMSTVEID-GRRASSSLLRDALG 218

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G +  AA LLG  + I   V+HG ++GR LGFPTAN+ L       +GV+A+   T   
Sbjct: 219 AGQLDTAARLLGRPYQISGRVVHGRQLGRQLGFPTANICLPFKRPALQGVFAVECDTP-A 277

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            ++ G A+ GRNPT+   G   LE ++ DF+ ++YGQR TV F   LR E K+  ++ L 
Sbjct: 278 GTFMGAASLGRNPTVETGGRYKLEVYLLDFTGDLYGQRVTVRFMAKLRDEAKYDSLDALV 337

Query: 296 IYMGEDEKKARKILE 310
             +  D    R++L 
Sbjct: 338 SQIHADVAATRRLLA 352


>gi|297617192|ref|YP_003702351.1| riboflavin biosynthesis protein RibF [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145029|gb|ADI01786.1| riboflavin biosynthesis protein RibF [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 314

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 161/316 (50%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +   +E         +   +A+GNFDG+HLGH  +++  I+ A         L F PH
Sbjct: 1   MRIIKGLENYHK----GRPLSLALGNFDGVHLGHQKLIKLNIRDAKERGTIAAALIFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        L   S + ++   +G   +I+  FTLE A    E F + VL E L V
Sbjct: 57  PLRVLYPERTPRMLISTSRKIELFTLLGLEMVIQTPFTLEIARLIPEYFARHVLHETLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +V  G  + FG   AG    L+  GE+ GF    +  +   + Q+VSS+ +R AL  G 
Sbjct: 117 ASVSVGFNYTFGHKGAGTPETLKHLGEEIGFAVNVVPPVMVGE-QVVSSTLVRQALEAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           +  A  LLGY   +E +VI GE+ G  +GFPTAN+++  D++   EGVYA +   +    
Sbjct: 176 IDWAYKLLGYWPMLEGEVIEGERRGGKIGFPTANLKIDEDLIVPGEGVYAAKALVRG-EV 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++ V N G+ PT     P+ +E++I DF + IYG+   + F   +R E+KF   E+L   
Sbjct: 235 HNAVVNIGKKPTFHNTYPVTVEAYILDFHRIIYGETIRLYFLKRIRGEMKFSGAEQLVAQ 294

Query: 298 MGEDEKKARKILESSY 313
           + +D  +A+++L  + 
Sbjct: 295 IHQDVTQAQRVLADTR 310


>gi|268319267|ref|YP_003292923.1| riboflavin kinase / FAD synthetase [Lactobacillus johnsonii FI9785]
 gi|262397642|emb|CAX66656.1| riboflavin kinase / FAD synthetase [Lactobacillus johnsonii FI9785]
          Length = 312

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   K  ++ +G FDG+H+GH  +++  + I    N P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKNLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT E +  + + F+ +V++  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLTPQDFVDQVVI-KLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L +  +      + ++  +      V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGPKDIANVENLPQFAKDRFK--IVVEPKQAIDKIKVGSTYIRKAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAAELLGQPYETSGVIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKING-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFDFDEEAYGETLTLAWYKFIRKNKKFSGIEELSHQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRDIKQYF 307


>gi|306785597|ref|ZP_07423919.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu003]
 gi|306798694|ref|ZP_07436996.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu006]
 gi|306807411|ref|ZP_07444079.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu007]
 gi|308232241|ref|ZP_07415404.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu001]
 gi|308377125|ref|ZP_07441217.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu008]
 gi|308378099|ref|ZP_07481509.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu009]
 gi|308379316|ref|ZP_07485843.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu010]
 gi|308380470|ref|ZP_07490061.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu011]
 gi|308405967|ref|ZP_07494595.2| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu012]
 gi|308214576|gb|EFO73975.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu001]
 gi|308329780|gb|EFP18631.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu003]
 gi|308341074|gb|EFP29925.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu006]
 gi|308346142|gb|EFP34993.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu007]
 gi|308348879|gb|EFP37730.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu008]
 gi|308353599|gb|EFP42450.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu009]
 gi|308357445|gb|EFP46296.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu010]
 gi|308361394|gb|EFP50245.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu011]
 gi|308365006|gb|EFP53857.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis SUMu012]
 gi|323718632|gb|EGB27796.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CDC1551A]
          Length = 324

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+   L++ GE++GF       + E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF+ + +L   MG D ++AR +L +
Sbjct: 297 QKKFESVRQLVAAMGADTERARDLLST 323


>gi|71276194|ref|ZP_00652473.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Dixon]
 gi|71900453|ref|ZP_00682584.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|170730686|ref|YP_001776119.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa M12]
 gi|71162955|gb|EAO12678.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Dixon]
 gi|71729759|gb|EAO31859.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|167965479|gb|ACA12489.1| riboflavin kinase / FAD synthetase [Xylella fastidiosa M12]
          Length = 315

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 108/311 (34%), Positives = 167/311 (53%), Gaps = 8/311 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASATPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  + +S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNER-ISATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIAL-SGIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTAQIHR 297

Query: 301 DEKKARKILES 311
           D ++AR IL  
Sbjct: 298 DAQQARHILSE 308


>gi|298482244|ref|ZP_07000431.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D22]
 gi|298271531|gb|EFI13105.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D22]
          Length = 326

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 159/327 (48%), Gaps = 16/327 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +       P      V  IG FDG+H GH  +++Q  +IA        +++F  H
Sbjct: 1   MQIIRDTSAINPEP-----SVATIGFFDGVHAGHRYLIQQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+ P  +  +L  +G    +   FT E +  +A +F+ ++L E  +V
Sbjct: 56  PRKVMNVDYRPELLTTPEEKISLLADIGVDYCLMLDFTPEVSRLTAREFMTQLLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI------DELRNNKSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +         E+ N  +  VSSS IR 
Sbjct: 116 KYLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAKAYTSNIEIENVPNVPVSSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  L Y + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHQGEVDLAADCLKYEYFLDGIVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D+ +Y G+ N G  PT+       +E  I  F  +IY +   ++F    RPE+KF  
Sbjct: 235 VTFDKKTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSDIYDKFIRLTFVKRTRPELKFSS 294

Query: 291 IEKLKIYMGEDEKKARKILESSYPLSE 317
           I++L + + +D ++   IL +S   S 
Sbjct: 295 IDELIVQLHKDAEETEAILLASKAGSN 321


>gi|257869199|ref|ZP_05648852.1| riboflavin kinase/FAD synthetase [Enterococcus gallinarum EG2]
 gi|257803363|gb|EEV32185.1| riboflavin kinase/FAD synthetase [Enterococcus gallinarum EG2]
          Length = 312

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 15/319 (4%)

Query: 1   MHVFHNIEINQSLPNHL---KGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSF 55
           M +   IE+       +   +  V+ +G FDG+HLGH  ++E  +A        + +++F
Sbjct: 1   MEI---IELRHPYNKDVIPSEPVVLVLGFFDGVHLGHQKVIETGKAAAKEKGLKLALMTF 57

Query: 56  NPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           N HP  + Q   P  +  L+  S +E  +  +G   L    FT   AN + + F+ + +V
Sbjct: 58  NQHPSIVFQKVDPEAMQYLTSLSQKEAHMADLGVDYLYEVDFTSAFANLAPQVFVDQYMV 117

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V+ G  + +GK    +  +L    +   F  + + +      + VSS+ IR A
Sbjct: 118 -GLHAEVVVAGFDYTYGKKETANMALLPSYAQGR-FEVITVPK-ETLAGEKVSSTRIRAA 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT 232
           L  G +  A  LLGY +  E  V+HG+  GR LGFPTAN+++   + L KEGVY    + 
Sbjct: 175 LQNGEMAEANRLLGYPYEFEGTVVHGDARGRELGFPTANIKVKSTVRLPKEGVYVTELKV 234

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D   Y  + + G N T      L +E +I DF Q+IYG+   + +  +LR ++ F   E
Sbjct: 235 GD-RWYPSMGSIGHNDTFGQGRQLTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFSGAE 293

Query: 293 KLKIYMGEDEKKARKILES 311
            L   + +DE   RK  + 
Sbjct: 294 ALIEQLQQDEIDTRKYFDK 312


>gi|325962818|ref|YP_004240724.1| FMN adenylyltransferase; riboflavin kinase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323468905|gb|ADX72590.1| FMN adenylyltransferase; riboflavin kinase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 327

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 90/318 (28%), Positives = 153/318 (48%), Gaps = 19/318 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
             +P      VV IGNFDG+H GH  +L + ++ A    S   V++F+PHP  + +  S 
Sbjct: 9   SEVPADFGPSVVTIGNFDGVHRGHQQVLSELVRTARITRSKAVVVTFDPHPALVHRPESA 68

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              +     + + L ++G  A++  K++L+ A+ + E+F+++ LV+ L    V+ G   R
Sbjct: 69  PELIMGLPDKLEALGELGLDAILVMKYSLDLASLTPEEFVEQYLVDCLHAGHVVIGHDVR 128

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDEL---------RNNKSQIVSSSNIRTALTKGHV 179
           FG+  +GD   +++ G K+GF    I E           +   +  SS+ +R  L +G V
Sbjct: 129 FGRGNSGDLETMRELGRKFGFEVQVISEFGSEGYPLHDDDGTDRRCSSTWVREVLQEGDV 188

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSY 238
             AA +LG    +  +V+HG   GR LGFPTAN+   +  ++  +G+YA     Q    +
Sbjct: 189 ATAAAVLGRPHRMRGEVVHGAARGRALGFPTANLASNASGLIPADGIYAGWLVDQAGKRW 248

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDIE 292
               + G NPT        +E+ + D  +      ++YGQ   V F   LR  + ++  E
Sbjct: 249 PAAISVGSNPTFDGVS-RQVEAHVIDRPKEAVEDFDLYGQTVVVEFVARLRGMVAYRGPE 307

Query: 293 KLKIYMGEDEKKARKILE 310
            L   M  D  +A  +L 
Sbjct: 308 ALVEQMRLDVIQAHDLLA 325


>gi|256851253|ref|ZP_05556642.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           27-2-CHN]
 gi|260660677|ref|ZP_05861592.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           115-3-CHN]
 gi|282934721|ref|ZP_06339964.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|297206120|ref|ZP_06923515.1| FAD synthetase [Lactobacillus jensenii JV-V16]
 gi|256616315|gb|EEU21503.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           27-2-CHN]
 gi|260548399|gb|EEX24374.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           115-3-CHN]
 gi|281301296|gb|EFA93597.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|297149246|gb|EFH29544.1| FAD synthetase [Lactobacillus jensenii JV-V16]
          Length = 312

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 90/316 (28%), Positives = 161/316 (50%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFN 56
           M + H   ++  +   L     V+A+G FDG+H+GH  ++++A ++A     P+ VL+F+
Sbjct: 1   MEIIH---LSYPIKKELTRTHVVLALGFFDGVHIGHQKLIKRAQEVAKKKSLPLMVLTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ I    +    L     + + +EK+G   L    FT   +  S ++F+ +V++  L
Sbjct: 58  RHPKEIYLGRTDFEYLDNLPEKAEKMEKLGVDYLAVAPFTEGFSKLSPQEFVDQVII-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   V+ G  + +G     +   L     K  F  V + E + +    + S+ IR A+  
Sbjct: 117 KADAVVAGFDYTYGPKDIANMENLP-YFAKNRFEIVILPE-QTSGGCKIGSTAIRQAIRN 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQ 235
           G++  A +LLG  + +   V HG + G  LGFPT N+ L    ++ K GVYA R      
Sbjct: 175 GNLELATNLLGSHYIMSGIVGHGLRNGHKLGFPTVNLVLNDRKVIPKIGVYATRTLVHG- 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T+     + +ES +FDF ++IY +  ++ ++ Y R EIKF  +++LK
Sbjct: 234 KWYDSMTSVGYNVTIQTGKKIYIESHLFDFDEDIYDEEISIEWYHYTRGEIKFSSLDELK 293

Query: 296 IYMGEDEKKARKILES 311
             + +DEK+ RK  ++
Sbjct: 294 EQLIKDEKEIRKYFKN 309


>gi|189345847|ref|YP_001942376.1| riboflavin biosynthesis protein RibF [Chlorobium limicola DSM 245]
 gi|189339994|gb|ACD89397.1| riboflavin biosynthesis protein RibF [Chlorobium limicola DSM 245]
          Length = 321

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 8/294 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII--QSSSPIFTLS 73
           +   V IG+FDG+H GH  I+   + IA        V++F PHPR ++   +   I  L+
Sbjct: 25  EESAVTIGSFDGVHRGHRKIISGMLDIARFRKLRSVVVTFEPHPRRVLTAHADESIEILT 84

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + + +  +G   L   +FT E A +S+E FI++VLV  L  + V+ G    FG++R
Sbjct: 85  TLDEKIEQMAGLGVDLLFVVRFTPELAAWSSELFIEQVLVRMLHARNVVVGYDHGFGRNR 144

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G    L + GE YGF    I+E R   S+  SS+ IR  L  G + +A   LG  + + 
Sbjct: 145 SGSGKTLSQLGELYGFQVDVIEEFRI-GSEHFSSTKIRALLKNGSIRDANAFLGVPYVVS 203

Query: 194 SDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V  G+++GR LGFPTAN+ L     +L + GVY       D  SY  + N G  PT+ 
Sbjct: 204 GRVTSGKQLGRLLGFPTANLMLPDPQKLLPRSGVYMA-TTVIDGESYRAMMNIGCRPTVS 262

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
               + +E+ I  +S  +YG++   S   ++R E KF  ++ L+  + +D+K  
Sbjct: 263 DECDIRVEAHILGYSGHLYGRQIRFSILGFIREEKKFDSLDLLREQLEKDKKTV 316


>gi|332981618|ref|YP_004463059.1| riboflavin biosynthesis protein RibF [Mahella australiensis 50-1
           BON]
 gi|332699296|gb|AEE96237.1| riboflavin biosynthesis protein RibF [Mahella australiensis 50-1
           BON]
          Length = 323

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 6/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+AIG FDGIHLGH  +++     A+       + +F+ HP  ++        L     +
Sbjct: 16  VMAIGTFDGIHLGHQQLIKTLKDKASLYKCASAIYTFDRHPLNVLCPDKTPALLMNNKQK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L + G   +I  +F    A+  A++F+  +L    +VK+VI G  F FG    G+  
Sbjct: 76  LSVLRQYGIDYVILNEFNKAFADTPADKFVNNILFGLYDVKSVIVGFDFTFGYKGQGNAQ 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+  G K G   V +  ++ N    VSSS IR  ++ G V  AA  LG  F +  +V  
Sbjct: 136 LLKDEGRKRGIDVVIVPPVKVN-GITVSSSLIRRLVSDGCVEEAACYLGRPFALLGEVHT 194

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMVPNGPL 256
           G KIG  LGFPTAN+   P+ ++ + GVYA           +  V N G  PT   +  +
Sbjct: 195 GHKIGHKLGFPTANLTPDPEVVVPRRGVYATEVVISGMEGIWKAVTNIGTRPTFN-DTHI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E+ I D+   +YG+   + F   LR E+ F   ++L   + ED  +AR++LE+
Sbjct: 254 SVETHILDYGGWLYGRELEIRFISRLRDEMSFSSPKQLVRQIREDIDRAREVLEN 308


>gi|220903644|ref|YP_002478956.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867943|gb|ACL48278.1| riboflavin biosynthesis protein RibF [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 313

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 13/317 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M++ H+IE      +  +   + IGNFDG+HLGH  ++   + + +   +   V++F PH
Sbjct: 1   MNIAHSIEEL----DFSENSGLTIGNFDGVHLGHQALIRHTLDVCSGEGLTPVVMTFWPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    +   LE +G   ++   FT E A   A  F++   +E L +
Sbjct: 57  PRQVVMPHLGHMPLTTREERFARLEALGVRHVLELPFTHELAALDAAGFVRA-FLEPLRL 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F  G+DR G   +L++ G   GF    +  +  + +  VSS+ +R  + +G 
Sbjct: 116 RHLVVGYDFSLGRDRGGHVDVLRRLGADAGFCVEQLPPVVVDGTV-VSSTTLRKLIDEGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----QD 234
           V  AA LLG        V+HG+  G  LGFPTAN+      + + GVYA           
Sbjct: 175 VREAARLLGRFHGFSGQVVHGDGRGAGLGFPTANLARPEVAIPRAGVYATLATLATPAGS 234

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           + +   V   G  PT   N  L +E+F+ +   ++YG+   + F + LR E +F  ++ L
Sbjct: 235 EKARPAVTCIGCKPTFGEN-ELSVETFLLEGGGDLYGRTLRLDFVERLRGEKRFDSVDAL 293

Query: 295 KIYMGEDEKKARKILES 311
           K+ +  D ++AR+IL +
Sbjct: 294 KLQIAADVEQARRILAA 310


>gi|153801864|ref|ZP_01956450.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-3]
 gi|124122575|gb|EAY41318.1| riboflavin kinase/FMN adenylyltransferase [Vibrio cholerae MZO-3]
          Length = 284

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 128/275 (46%), Gaps = 2/275 (0%)

Query: 42  IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
                  P  V++F P P  +         L+    +   L K+G   L+   F    A 
Sbjct: 3   RAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQ 62

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK 161
             A  FI+ +LV  L VK ++ G  F FGK+R G+  +LQ+ G+  GF  V        +
Sbjct: 63  LDAHTFIRDLLVTRLGVKFLVVGDDFCFGKERQGNFVLLQQAGQALGFEVVSTQSFCLQQ 122

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
            + VSS+ IR AL    + +A+ +LG  ++I   V HG+K+GRT+GFPTAN+ L   +  
Sbjct: 123 LR-VSSTAIREALAADQLSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSP 181

Query: 222 KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
             GVY +       T   GVAN G  PT+       LE   FDF   +YG++  V+    
Sbjct: 182 VSGVYVVEAYGLGPTPVGGVANIGNRPTV-DGVRQQLEVHFFDFQGNLYGKQLEVALLHK 240

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           LR E KF   E LK  +  D + AR  L      S
Sbjct: 241 LRDERKFASFEALKQQIELDAEAARVWLRQLKGCS 275


>gi|124268229|ref|YP_001022233.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Methylibium
           petroleiphilum PM1]
 gi|124261004|gb|ABM95998.1| FMN adenylyltransferase / riboflavin kinase [Methylibium
           petroleiphilum PM1]
          Length = 349

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 149/349 (42%), Gaps = 31/349 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF  +  +  L        V +GNFDG+H GH  +L          +   TVL+F PH
Sbjct: 1   MQVFRGL--HHILLADGGASAVTVGNFDGVHRGHQAMLALLKSEAEHRDLLSTVLTFEPH 58

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR          +     ++    +   L + G   ++  +F    A+ S + FI  VL+
Sbjct: 59  PRDFFAARAGTPAKAPARIATLRDKLGELARCGVQRVVVLRFDQTFADQSPQAFIDDVLL 118

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             ++ + V+ G  F FG  RAGD  +L   GE+ GF    +     +    VSSS +R A
Sbjct: 119 RGVKARYVLVGDDFCFGAKRAGDYAMLDAAGERQGFDVARMMSYEVH-GLRVSSSAVREA 177

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL--------GFPTANMQLSPDILLKEGV 225
           L  G +     LLG  ++I   V HG K+GR L        GF T N++         G+
Sbjct: 178 LGAGDMALVTRLLGRPYSISGHVTHGRKLGRELGAGPDGGDGFRTLNLRFPHPKPAAHGI 237

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI-----YGQRCTVSFFD 280
           Y +R          GVA+ G  PT+  +G +LLE    D+   +     YG+   V    
Sbjct: 238 YVVRTHGLTAEPLDGVASLGARPTVDDSGRVLLEVHCLDWPAHLGAEGGYGKLVRVELLH 297

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE--------RDRI 321
            LR E ++  +  L   + +D  +AR+ L SS   +         RDRI
Sbjct: 298 KLRDEARYDGLAALTAAIAQDVSQARQWLTSSPHAAHAAERRQTTRDRI 346


>gi|148273325|ref|YP_001222886.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831255|emb|CAN02211.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 310

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V H+      +P       V IG FDG+H GH  ++ +   I         V++F+ H
Sbjct: 1   MLVVHD---PAGVPGGFGPSAVTIGKFDGVHAGHRAVIRRLLGIAADEGLSSAVVTFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  ++   +L     + ++L ++G  A +   F       S E+F++ VLV+ L  
Sbjct: 58  PAALLAPAARPQSLVSNRQKIELLAELGVDATLMLPFDERLQRLSPEEFVRTVLVDALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG   AGD   L + GE +GF TV + ++  + S+ VSS+ IR  + +G 
Sbjct: 118 RVVLVGEDFRFGAQGAGDAATLTRLGEAHGFRTVVVGDVMPDGSRKVSSTWIRDLMDRGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  AA LLG    +  DV+HGEK GR LGFPTAN+    + ++  +GVYA   R  D+T 
Sbjct: 178 VEAAAELLGRAPAVRGDVVHGEKRGRELGFPTANLSPEAEGLIPADGVYAGWLRDGDRT- 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y    + G NPT     P ++E+F+ D + ++Y     V F   +R  + ++  E L   
Sbjct: 237 YPSAISVGTNPTFAGVRPRVVEAFVLDETLDLYDHEVEVVFVARIRGMVAYEGREPLIAQ 296

Query: 298 MGEDEKKARKIL 309
           M +D  + R +L
Sbjct: 297 MTDDVVRTRGVL 308


>gi|113475532|ref|YP_721593.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Trichodesmium erythraeum IMS101]
 gi|110166580|gb|ABG51120.1| FMN adenylyltransferase / riboflavin kinase [Trichodesmium
           erythraeum IMS101]
          Length = 368

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 171/368 (46%), Gaps = 64/368 (17%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---------------- 50
           + I  SL   L    VA+GNFDG+H GH  ++E  + +   S +                
Sbjct: 1   MWITSSLATALTPTAVALGNFDGLHQGHRQVIEPILNLKGRSKLLSVCPSELTRTTEVDE 60

Query: 51  -----------------------------------TVLSFNPHPRTIIQSSSPIFTLSPP 75
                                              TV++FNPHP+    S  P   L+P 
Sbjct: 61  DTKLKLWHQDSKLSSWHFENELGKNDDYLRQKIYSTVVTFNPHPQEFF-SGKPKKLLAPL 119

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  I + +G   ++   F    A+ +  +F++++LV+ L+V  +  G  F FG+ RAG
Sbjct: 120 EEKLAIFKHIGVEQVVLLPFDRNLADLTPNKFVEEILVKGLQVHQISVGCDFCFGQKRAG 179

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               LQ     Y      +    +   + +SSS IR AL KG +  +  LLG  +++  +
Sbjct: 180 KAKDLQAIAGYYDIDVTTVPLYHSENGERISSSIIRQALEKGDLDKSNRLLGRPYSLIGE 239

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----------TQDQTSYSGVANF 244
           V+HG+++GRTLGFPTAN+QL+    L + GVYA+                ++ Y GV N 
Sbjct: 240 VVHGQQLGRTLGFPTANLQLAAQKFLPRFGVYAVEVYLSRQKQPQEILHAESPYLGVMNV 299

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+    P  +E  + D SQ++YGQ  TV+  ++LRPE KF  ++ LK  + ED + 
Sbjct: 300 GCRPTLNSLDP-TVEVHLLDMSQDLYGQTLTVNLIEFLRPEQKFASLDLLKAQIYEDCRI 358

Query: 305 ARKILESS 312
           AR IL++ 
Sbjct: 359 ARSILKNQ 366


>gi|313672440|ref|YP_004050551.1| riboflavin biosynthesis protein ribf [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939196|gb|ADR18388.1| riboflavin biosynthesis protein RibF [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 307

 Score =  305 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 167/313 (53%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   IE   ++    +   + +GNFDG+H+GH  I+E+ + IA        V++F+PH
Sbjct: 1   MIIIKGIE---NIDIDFE-TSITLGNFDGVHIGHTRIIEKTVNIARGYGIKSVVVTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P         +  L+    + +ILE MG    +   F  E      E FI++++V+ L+ 
Sbjct: 57  PMAFF--GQRVDLLTNLEKKNQILETMGVDFHLVMSFNRELMMMDPEVFIREIIVKRLKA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  ++FG  R GD  +L+    +YG+     D++  +    VSSSNIR  L +G+
Sbjct: 115 KYVVVGYDYKFGSRRKGDFELLKIFSSRYGYEAYRYDKVVVDN-MTVSSSNIRNLLKEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  +++   V+ G+ IGR L +PTAN+ ++  ++ K GVYA      D   Y
Sbjct: 174 LSLANKMLGRYYSVLGQVVKGDGIGRLLSYPTANIVVADFLIPKYGVYATLIDI-DGKIY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V N G  PT+     L +ESFIFDF+ +IY +   + F  ++R E+KF++ + LK  +
Sbjct: 233 PCVTNVGVRPTIPGKNELRIESFIFDFNDDIYNKNVELFFVQFIRDEMKFENFDDLKNRI 292

Query: 299 GEDEKKARKILES 311
             D + A+ IL++
Sbjct: 293 AIDCEVAKNILDN 305


>gi|126698913|ref|YP_001087810.1| riboflavin biosynthesis protein [Clostridium difficile 630]
 gi|255100336|ref|ZP_05329313.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42]
 gi|255306273|ref|ZP_05350444.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255]
 gi|115250350|emb|CAJ68172.1| Riboflavin biosynthesis protein [Clostridium difficile]
          Length = 309

 Score =  305 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/304 (30%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +I+   ++    K  V+ IGNFDG+H GH +++ + ++ A   N    V +F  H
Sbjct: 1   MVIIKSIKEIANI----KESVITIGNFDGVHKGHQVLIGKTVEHAKKENIQSIVFTFANH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    + +S    +     + K+LE +G   ++   F        A+ F+ ++LV+ L+ 
Sbjct: 57  PVNYFRPNS-TKNIISNDDKIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F F + + G+  +L+    ++GF    I  ++ N    VSS+ IR+ +++G 
Sbjct: 116 KKIVIGHDFTFARAKEGNVNLLKSLEHEFGFEVEVIKPIKIND-VRVSSTYIRSLVSQGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           + N    LG  + +E  VIH + +GRT+GFPTAN+ L  ++L  K G+YA      D+T 
Sbjct: 175 MANVKEYLGRNYKLEGCVIHSKHLGRTIGFPTANIDLKNNMLVPKRGIYASIVHIGDET- 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     L +E+ I +F ++IYG+   V F + +R E KF  I+ LK  
Sbjct: 234 YFGATNVGYNPTVN-GKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLKNQ 292

Query: 298 MGED 301
           +  D
Sbjct: 293 LYND 296


>gi|302389791|ref|YP_003825612.1| riboflavin biosynthesis protein RibF [Thermosediminibacter oceani
           DSM 16646]
 gi|302200419|gb|ADL07989.1| riboflavin biosynthesis protein RibF [Thermosediminibacter oceani
           DSM 16646]
          Length = 325

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 164/317 (51%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M V+ +++      +        +GNFDG+HLGH  ++ + +           V++F PH
Sbjct: 1   MKVYKDLDTL----SVKTPAACGLGNFDGVHLGHQKLISELVTIADEKGLESFVVTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        ++    ++K++E  G   L+   FT   +  S E+FI  VL+E L+ 
Sbjct: 57  PSKILFPEKSSPLITSLGQKQKVIEAHGVKNLVVIPFTRTFSEMSYEEFIDCVLIEKLKA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  FRFG    G    L   G+K GF T+ I  +   +   VSS+ IR+ + +G 
Sbjct: 117 KLVVVGYNFRFGSGGRGTVEELIIMGKKKGFDTLIIPPVTLEEKV-VSSTLIRSMIERGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           ++ A  LLG  F+IE  V+ GE IGR LGFPTAN+  SP+I +   GVYA+    +    
Sbjct: 176 MVEARALLGRPFSIEGKVVTGEAIGRKLGFPTANVSFSPEIVVPAYGVYAVLVSLRG-KF 234

Query: 238 YSGVANFGRNPTM---VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           Y G+AN G  PT    V N    LE  IFDF+++IYG+   V F + +R E  F D + L
Sbjct: 235 YKGIANVGEKPTFKRKVANNQPTLEVHIFDFNEQIYGEEVEVYFIERIRDERLFPDAKSL 294

Query: 295 KIYMGEDEKKARKILES 311
              + +D  +AR IL+ 
Sbjct: 295 AQQVKQDFLRARSILDK 311


>gi|255325198|ref|ZP_05366304.1| riboflavin biosynthesis protein RibF [Corynebacterium
           tuberculostearicum SK141]
 gi|255297763|gb|EET77074.1| riboflavin biosynthesis protein RibF [Corynebacterium
           tuberculostearicum SK141]
          Length = 340

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 22/338 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
            +++ I+    +P  +    V IG FDG+H GH  ++   ++ A        +++F+PHP
Sbjct: 5   DIWYGID---DIPAEMGPTSVTIGVFDGLHRGHQQLIAACVEHARAHGERPVMVTFDPHP 61

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++         +     + ++ E+MG + ++   FT + A      +++ +LV  L  +
Sbjct: 62  VSVFLPERAPLAVLSFERRLELAEEMGIATVLVIDFTRDLAGVEPRPYVEDLLVGKLAAQ 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  F FG    G    +Q  G +YGF    +  L +++   + S++IR  L +G +
Sbjct: 122 HIVVGENFTFGAGATGTAQAMQDFGAEYGFSVDIV-PLLDDEGVRICSTHIRECLAQGDI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-- 235
            +A   LG  FT+   V+ G   G   LGFPTAN      + +  +GVYA  F       
Sbjct: 181 ESANWALGRHFTVTGPVVRGAGRGGKELGFPTANQYFPDTVAIPADGVYAGWFIVHSDSD 240

Query: 236 --------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                    +Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +K
Sbjct: 241 IEGDMRPGVAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGYEATVHFVGHLRDMVK 299

Query: 288 FKDIEKLKIYMGEDEKKARKILES---SYPLSERDRII 322
           F  +++L   M  D  KAR++L +   +   + +D  +
Sbjct: 300 FNSVDELLEAMANDVAKARQVLAADAKAQGWTAKDYFL 337


>gi|89900226|ref|YP_522697.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhodoferax
           ferrireducens T118]
 gi|89344963|gb|ABD69166.1| riboflavin kinase / FMN adenylyltransferase [Rhodoferax
           ferrireducens T118]
          Length = 322

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 95/327 (29%), Positives = 140/327 (42%), Gaps = 21/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF         P+  +   + IGNFDG+H GH  +L            P   ++F PH
Sbjct: 1   MKVFRGFH----HPDVAQACALTIGNFDGVHRGHQAMLALLKGEAQQRGVPSCAMTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        Q       +     +   L   G    +   F    A  S + FI +VLV
Sbjct: 57  PRDYFAAASHQPDLAPARIGTLRDKLADLALSGVDQTVILPFDARLAGLSPQAFIDEVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  K V+ G  FRFG  RAGD  +L   G   GF    ++    +    VSSS +R A
Sbjct: 117 KGLGAKYVLVGDDFRFGAKRAGDYALLDAAGVAQGFDVARMNSYEVH-GLRVSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L +G + +AA LLG  + I   V+HG K+GR LGF T N++ +       G++ +     
Sbjct: 176 LGQGRLQDAARLLGRPYRISGHVVHGRKLGRALGFRTLNLRFAHWKPAASGIFVVLVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLRP 284
                +GVAN G  P++ P     G +LLE+   D+   +     YG+   V     L  
Sbjct: 236 SPAPLAGVANMGIRPSLDPRDVNGGRVLLETHCLDWPDTLGPEGAYGKIIRVELLHKLHD 295

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           E+K+  ++ L   + +D   AR     
Sbjct: 296 ELKYDSLDALTAGIAQDCLDARAYFSK 322


>gi|317508350|ref|ZP_07966024.1| riboflavin biosynthesis protein RibF [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253348|gb|EFV12744.1| riboflavin biosynthesis protein RibF [Segniliparus rugosus ATCC
           BAA-974]
          Length = 314

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 11/315 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTI 62
            +    + +       V  IG FDG+H GH  ++ + +        P  +++F+PHP  +
Sbjct: 2   RHWRGTEDISPDWGRCVATIGTFDGVHRGHAELVRRTVNEARKRRLPSALVTFDPHPAQV 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           I++      L+  + + +++ ++G        FT E A  SAE+F+ + LV  L V  V+
Sbjct: 62  IRAGDHPAQLTTLTRRAELVGQLGIDVFCVIPFTRELAKQSAEEFVHEFLVSKLHVAKVL 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FG    G   +L   G ++GF    +  L    +  VSS+ IR+ +  G V  A
Sbjct: 122 VGENFTFGYKATGKIDMLVDLGRRFGFEAEAV-RLFTEHAVTVSSTYIRSVVAAGDVSAA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ------ 235
              LG    +E  V+HG+  GR LGFPTAN+       +  +GVYA  F           
Sbjct: 181 TEALGRPHRVEGVVVHGDGRGRELGFPTANVAPPMYSAIPADGVYAAWFSILSPGGRSAL 240

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                  + G NPT        +E+++ D + ++YGQ   V F   LR    FK  E+L 
Sbjct: 241 GRVPAAVSVGTNPTF-SGRERTVEAYVLDKNVDLYGQYVAVDFVRRLRDMRAFKSREELV 299

Query: 296 IYMGEDEKKARKILE 310
             + +D  + R++L 
Sbjct: 300 EAIAQDVAETREVLR 314


>gi|15609923|ref|NP_217302.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Rv]
 gi|15842324|ref|NP_337361.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis CDC1551]
 gi|31793962|ref|NP_856455.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium bovis AF2122/97]
 gi|121638666|ref|YP_978890.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662628|ref|YP_001284151.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Ra]
 gi|148823974|ref|YP_001288728.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis F11]
 gi|167968616|ref|ZP_02550893.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis H37Ra]
 gi|215404756|ref|ZP_03416937.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 02_1987]
 gi|215412599|ref|ZP_03421327.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428218|ref|ZP_03426137.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T92]
 gi|215431726|ref|ZP_03429645.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|215447038|ref|ZP_03433790.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T85]
 gi|218754527|ref|ZP_03533323.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis GM 1503]
 gi|224991158|ref|YP_002645847.1| riboflavin kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798130|ref|YP_003031131.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232884|ref|ZP_04926211.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis C]
 gi|254365437|ref|ZP_04981482.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551845|ref|ZP_05142292.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260187803|ref|ZP_05765277.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis CPHL_A]
 gi|260201914|ref|ZP_05769405.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T46]
 gi|260206098|ref|ZP_05773589.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis K85]
 gi|289444331|ref|ZP_06434075.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           T46]
 gi|289448444|ref|ZP_06438188.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553427|ref|ZP_06442637.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 605]
 gi|289575484|ref|ZP_06455711.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis K85]
 gi|289746589|ref|ZP_06505967.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           02_1987]
 gi|289751443|ref|ZP_06510821.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T92]
 gi|289754892|ref|ZP_06514270.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|289758913|ref|ZP_06518291.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis T85]
 gi|289762958|ref|ZP_06522336.1| riboflavin kinase/FMN adenylyltransferase [Mycobacterium
           tuberculosis GM 1503]
 gi|297635397|ref|ZP_06953177.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN 4207]
 gi|297732395|ref|ZP_06961513.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN R506]
 gi|298526252|ref|ZP_07013661.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|313659727|ref|ZP_07816607.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis KZN V2475]
 gi|2624308|emb|CAA15581.1| PROBABLE BIFUNCTIONAL FAD SYNTHETASE/RIBOFLAVIN BIOSYNTHESIS
           PROTEIN RIBF: RIBOFLAVIN KINASE (FLAVOKINASE) + FMN
           ADENYLYLTRANSFERASE (FAD PYROPHOSPHORYLASE) (FAD
           SYNTHETASE)(FAD DIPHOSPHORYLASE) (FLAVIN ADENINE
           DINUCLEOTUDE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|13882620|gb|AAK47175.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           CDC1551]
 gi|31619556|emb|CAD94994.1| PROBABLE BIFUNCTIONAL FAD SYNTHETASE/RIBOFLAVIN BIOSYNTHESIS
           PROTEIN RIBF: RIBOFLAVIN KINASE (FLAVOKINASE) + FMN
           ADENYLYLTRANSFERASE (FAD PYROPHOSPHORYLASE) (FAD
           SYNTHETASE)(FAD DIPHOSPHORYLASE) (FLAVIN ADENINE
           DINUCLEOTUDE SYNTHETASE) [Mycobacterium bovis AF2122/97]
 gi|121494314|emb|CAL72792.1| Probable bifunctional FAD synthetase/riboflavin Biosynthesis
           protein ribF: riboflavin kinase + FMN
           adenylyltransferase [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601943|gb|EAY60953.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis C]
 gi|134150950|gb|EBA42995.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF :
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506780|gb|ABQ74589.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           H37Ra]
 gi|148722501|gb|ABR07126.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF:
           riboflavin kinase + FMN adenylyltransferase
           [Mycobacterium tuberculosis F11]
 gi|224774273|dbj|BAH27079.1| riboflavin kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319633|gb|ACT24236.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417250|gb|EFD14490.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           T46]
 gi|289421402|gb|EFD18603.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438059|gb|EFD20552.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 605]
 gi|289539915|gb|EFD44493.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis K85]
 gi|289687117|gb|EFD54605.1| riboflavin biosynthesis protein RibF [Mycobacterium tuberculosis
           02_1987]
 gi|289692030|gb|EFD59459.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T92]
 gi|289695479|gb|EFD62908.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|289710464|gb|EFD74480.1| riboflavin kinase/FMN adenylyltransferase [Mycobacterium
           tuberculosis GM 1503]
 gi|289714477|gb|EFD78489.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis T85]
 gi|298496046|gb|EFI31340.1| riboflavin kinase + FMN adenylyltransferase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|326904401|gb|EGE51334.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis W-148]
 gi|328457903|gb|AEB03326.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis KZN 4207]
          Length = 331

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 17/325 (5%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +         +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP 
Sbjct: 7   IVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPM 66

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   S    L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  
Sbjct: 67  EVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVE 126

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALTKG 177
           V+ G  F FGK  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G
Sbjct: 127 VVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAG 186

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ- 235
            ++ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F      
Sbjct: 187 DMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHG 246

Query: 236 ---------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT        +E+F+ D + ++YGQ   + F   +R + 
Sbjct: 247 PVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQK 305

Query: 287 KFKDIEKLKIYMGEDEKKARKILES 311
           KF+ + +L   MG D ++AR +L +
Sbjct: 306 KFESVRQLVAAMGADTERARDLLST 330


>gi|119356211|ref|YP_910855.1| riboflavin kinase / FMN adenylyltransferase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353560|gb|ABL64431.1| FMN adenylyltransferase [Chlorobium phaeobacteroides DSM 266]
          Length = 321

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 8/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTII-QSSSP-IFTLSP 74
              V IG+FDG+H GH  I+ +  AI  +      V++F PHPR ++  S+SP    LS 
Sbjct: 26  PSAVTIGSFDGVHRGHRSIIARMNAIARSRQLRSVVVTFEPHPRRVLSASASPSPLVLST 85

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L  +    L   +FT   A  S+E FI  VLV+ L  K++I G    FG++R 
Sbjct: 86  LDEKVALLTSLDVDLLFVIRFTDAFAARSSEDFIVGVLVKLLCAKSIIVGYDHGFGRNRT 145

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L   G+++GF    I E++   ++  SS+ IR  L  G++ +A   LGY + +  
Sbjct: 146 GSSETLLHLGKEFGFDVEAITEVKI-GNEHFSSTRIRKLLESGNLSDANQFLGYSYIVSG 204

Query: 195 DVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+ G++ GRT+GFPT N++ S    +L   GVY       D  SY  + N G  PT+  
Sbjct: 205 TVVGGDQRGRTIGFPTVNIKPSDPQKLLPHSGVYLAMIE-LDGISYKAMMNIGVRPTVSQ 263

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                +E+ I  FS E+YG   +     Y+R E KF  I++LK  + +D+K     
Sbjct: 264 GNEKTVEAHIPGFSGELYGAFLSFRLLVYIREEKKFATIDELKEQLEKDKKTVELY 319


>gi|313205214|ref|YP_004043871.1| riboflavin biosynthesis protein ribf [Paludibacter propionicigenes
           WB4]
 gi|312444530|gb|ADQ80886.1| riboflavin biosynthesis protein RibF [Paludibacter propionicigenes
           WB4]
          Length = 313

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 10/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M + ++ +        L   +  +G FDG+H GH  ++ +  + A        V++F  H
Sbjct: 1   MDIIYSSDKIS-----LPPCIATVGFFDGVHAGHRFLINELKERASAEKLKSVVVTFATH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        LS  + + ++LE  G    I   FT E A  SA  F++ VL     V
Sbjct: 56  PHKVLNDDFTPELLSTLAEKLQLLESTGIDYCIVLNFTKEMAALSAFDFLKLVLSGQYNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G   RFG +R       +  GEK G           ++ Q +SSS IR AL +G 
Sbjct: 116 RSLLVGHDHRFGHNRQDGFPEYKAYGEKLGMKVTQAKRFSTSEIQHISSSQIRLALHRGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM--QLSPDILLKEGVYAIRFRTQDQT 236
           +  A  +L Y ++    V +G KIGR +GFPTAN+  + S  ++   GVYA+    Q+  
Sbjct: 176 IGAANDILTYNYSFTGKVTNGFKIGRKIGFPTANLVPENSEKLIPPFGVYAVLVYWQN-E 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N G  PT+       LE  I DF ++IY Q   + F   +R E KF  +++L  
Sbjct: 235 VYKGMMNIGTRPTLNNGYHTSLEVHIIDFDEDIYNQLIRIEFIQKIRDEKKFNGVDELIE 294

Query: 297 YMGEDEK 303
            +G+D++
Sbjct: 295 QLGKDKQ 301


>gi|110597603|ref|ZP_01385888.1| riboflavin biosynthesis protein RibF [Chlorobium ferrooxidans DSM
           13031]
 gi|110340723|gb|EAT59200.1| riboflavin biosynthesis protein RibF [Chlorobium ferrooxidans DSM
           13031]
          Length = 321

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSS--SPIFTLSP 74
           G  V IG+FDG+H GH +I+ +  A+  +      V++F PHPR +++ +   P+  L+ 
Sbjct: 26  GSAVTIGSFDGVHKGHRMIIARLVALARSRQLRSVVVTFEPHPRRVLKGAVTGPLGLLTT 85

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L + G   L   +FT + A  S+E FI+ VLV  +  K++I G    FG+DR+
Sbjct: 86  LEEKINLLSREGVDLLFVVRFTPDFARRSSEDFIRNVLVNLIGAKSIIIGYDHAFGRDRS 145

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+  G +  F    +DEL     +  SS+ IR  L  G +  A   LG  + I  
Sbjct: 146 GSGTTLEHLGGELDFDVEVLDELLIGD-EHFSSTRIRQLLASGLIAEANEFLGSPYMISG 204

Query: 195 DVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+ G+K GR +GFPT N+QL     +L + GVY  R    D  S+  + N G  PT+  
Sbjct: 205 VVVDGDKRGREIGFPTVNLQLSDPDKLLPRSGVYLARTE-LDGRSFKVMMNIGLRPTVSS 263

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            G   +E++I  +S  +YG+    S F ++R E KF  +++LK  + +D+K     
Sbjct: 264 EGITTVEAYILGYSGTLYGRTLKFSLFRFIREERKFTSLDELKNQLEKDKKTVELY 319


>gi|304404297|ref|ZP_07385959.1| riboflavin biosynthesis protein RibF [Paenibacillus curdlanolyticus
           YK9]
 gi|304347275|gb|EFM13107.1| riboflavin biosynthesis protein RibF [Paenibacillus curdlanolyticus
           YK9]
          Length = 317

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 8/293 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTII-QSSSPIFTLSPPSIQ 78
           +AIG+FDG+H GH  ++ +A++          VL+F+PHP+ ++      +  L+P   +
Sbjct: 13  IAIGHFDGVHKGHQDVIRRAVEAAGNQQRKSAVLTFHPHPKDVLSHGDQYVSCLTPLDAK 72

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +   ++G       KF  + AN S E+F+  VLV  L V+  + G  F FG   AGD G
Sbjct: 73  LERFAELGVDYTFVMKFDQDFANVSPERFVSDVLVP-LGVRHAVIGFDFHFGHRGAGDAG 131

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L   G +    T  ++ L  N  + VSS+ +R AL +G    A +LLG  + +   V+H
Sbjct: 132 MLTSLGSELNITTEVVEPLLLN-GKKVSSTYVREALGEGDAELAKYLLGRPYEVNGTVVH 190

Query: 199 GEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-L 256
           G   GRT+GFPTAN+ L +P +  + GVYA+       T Y  V N G  PT        
Sbjct: 191 GHARGRTIGFPTANIGLTAPYVTPRLGVYAVFAEVGGVT-YPAVMNHGMKPTFKDGETAP 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           ++E  +FDFS ++Y Q  TV F  +LR E KF  I++L   +G D  +AR  L
Sbjct: 250 VMEVHLFDFSGDLYDQTMTVRFHTFLRAERKFDSIDELIAQIGRDRDEARDRL 302


>gi|288870955|ref|ZP_06115906.2| riboflavin biosynthesis protein RibF [Clostridium hathewayi DSM
           13479]
 gi|288865264|gb|EFC97562.1| riboflavin biosynthesis protein RibF [Clostridium hathewayi DSM
           13479]
          Length = 319

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  VV IG FDG H GH  +L+Q   +K        V +F+  P +++        ++  
Sbjct: 15  EPSVVTIGKFDGRHRGHQKLLKQMLEVKAERGLKTAVFTFDMTPGSLVAGKQQ-TVITTN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   LEK+G   L+ Y FT ETA+ + E F++ +LV  +  + ++ GT   FG   AG
Sbjct: 74  LERRNNLEKIGIDYLVEYPFTEETAHMAPEDFVRDILVSRMHARVIVVGTDCSFGYKGAG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L+    KYG+  + I + R++  + +SS+ +R  L  G+++ A  LLG  + I   
Sbjct: 134 NADCLEAWKAKYGYELIVIRKERDDN-RDISSTYVREELDAGNIVKANELLGEPYAIHGT 192

Query: 196 VIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG  IG + LGFPTAN+   P+  L   GVY  +   +  T Y GV N GR PT+   
Sbjct: 193 VVHGNHIGGSVLGFPTANILPPPEKHLPAFGVYVSKVYVEG-TYYGGVTNIGRKPTVSGE 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            P+  E+F++   Q+IYG+   V    ++RPE KF  +E+LK  +G D   A   L++
Sbjct: 252 SPVGAETFLYGIDQDIYGKNIEVQLLSFIRPEKKFDGLEQLKAQIGRDRDYALAYLKN 309


>gi|321315434|ref|YP_004207721.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis BSn5]
 gi|320021708|gb|ADV96694.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis BSn5]
          Length = 316

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +  +       V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ S +QFI + ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMETMPD--DLDGKAGCTMVEKLTEQDKKISSSYIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELANVLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L
Sbjct: 237 VYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +   +
Sbjct: 297 TEQIEKDKQEAIRYFSN 313


>gi|121606118|ref|YP_983447.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Polaromonas
           naphthalenivorans CJ2]
 gi|120595087|gb|ABM38526.1| FMN adenylyltransferase [Polaromonas naphthalenivorans CJ2]
          Length = 341

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 156/346 (45%), Gaps = 30/346 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F   +  Q  P       + IGNFDG+H GH  +L            P   ++F PH
Sbjct: 1   MKIFRGYQHPQLAPE----CALTIGNFDGVHRGHQAMLALLKSEARHRGVPSCAVTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       ++    +   L+  G    +   F    A+ S + FIQ+VL+
Sbjct: 57  PRDYFAALARKPELAPARIATLRDKLGELDHCGIDQCVILPFNAHLASQSPDAFIQEVLL 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFG  RAGD  +L   G + GF    ++    + S+ VSSS +R A
Sbjct: 117 KGLGARYVLVGDDFRFGARRAGDYAMLDAAGVRLGFDVARMNSYEVSNSR-VSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L+ G +   A LLG  ++I   V+HG K+GR LGF T N++ S       G++A+     
Sbjct: 176 LSHGDMARVAALLGRHYSISGHVVHGRKLGRELGFRTLNLRFSHWKPAASGIFAVLVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFS-----QEIYGQRCTVSFFDYLRP 284
                 GVAN G  P++ P+    G +LLE+   D+      QE YG+   V     L  
Sbjct: 236 AGQPVQGVANLGIRPSIDPDDVNGGRVLLETHCLDWPASLGAQEAYGKIIRVELLHKLHD 295

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSYPLS---------ERDRI 321
           E+K+  +E LK  + +D   AR     S+  S          RDRI
Sbjct: 296 ELKYDGLESLKTGIAKDCGDARAFFTQSFSASMHTETSRQTTRDRI 341


>gi|71891904|ref|YP_277634.1| bifunctional: flavokinase; FAD synthetase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796010|gb|AAZ40761.1| bifunctional: flavokinase; FAD synthetase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 324

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 6/319 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M     +    ++ +  KG ++ IGNFDG H GH  +LE+  K  N    P+ V+ F P 
Sbjct: 1   MEFVRGL---HNIKSRHKGCILTIGNFDGFHRGHQALLEKLQKKRNILKLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+  + +   I  L+    +   L   G   ++   F  + A   A  FI+ +L+  L+V
Sbjct: 58  PKEYLSNIIAI-RLTRLRDKVNYLCTAGVDVILCITFNKKFAAIEAYNFIKNILISKLDV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  F+FG  R GD  +L+K G+  GF  + I    +  ++ +SS+ IR AL +  
Sbjct: 117 RFVYIGDDFKFGAFRKGDFVLLKKIGKNAGFKVIRIATYFDENNRRISSTAIRVALVENR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +L+A  LLG+ + I   V+HG+++GR +GFPTAN+ L    L   GVYA+          
Sbjct: 177 ILDAELLLGHSYCISGRVVHGDELGRRIGFPTANVSLQGKRLPIHGVYAVEVYGISNYPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G  PT+       LE  + + S  +Y     V F   +R E  F  ++KL+  +
Sbjct: 237 PGIANVGICPTVTGKNQQKLEVHLLNVSTNLYTYHIKVVFLAKIRDEQYFSSVKKLQRQI 296

Query: 299 GEDEKKARKILESSYPLSE 317
             D  K R     +  +++
Sbjct: 297 KRDIIKVRSYFNKTNNINK 315


>gi|296135804|ref|YP_003643046.1| riboflavin biosynthesis protein RibF [Thiomonas intermedia K12]
 gi|295795926|gb|ADG30716.1| riboflavin biosynthesis protein RibF [Thiomonas intermedia K12]
          Length = 323

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 150/328 (45%), Gaps = 12/328 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           MHVF  I              + IGNFDG+H GH  +L Q +++A +  +   VL+F PH
Sbjct: 1   MHVFRGIHHRSLA----SRTALTIGNFDGVHRGHLAMLHQLVQVARSRALVPTVLTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR           S    +S    +   L + G   ++  +F    A  S E+F+ +++ 
Sbjct: 57  PRDFFATLQGHPDSAPSHISTLRDKLCALREAGVQQVVVLRFDPRIAALSPEEFVAQIVW 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L+ + V+ G  FRFG  RAGD   L       G     +  +    +  +SSS +R A
Sbjct: 117 QGLKAQFVLVGDDFRFGARRAGDFAQLDTLMRNLGGEARQM-PVVTETALRISSSAVRQA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  A  LLG  + I   V+HG K+GR LGFPT N++         GV+  R    
Sbjct: 176 LQAGDMETAQVLLGRPYAISGHVLHGAKLGRKLGFPTLNLRFDRARPALGGVFVARVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +      VA+ G  P +  +G +LLE+ +FD+  E YG+   V     LR E  + D+ +
Sbjct: 236 ELAPLPAVASLGTRPAVETDGRVLLETHVFDWQAEAYGKLIRVELLHKLRDEAHYPDLTQ 295

Query: 294 LKIYMGEDEKKARKILESSYPLSERDRI 321
           L   +  D  +AR         + RDRI
Sbjct: 296 LIAAIQNDSDQARAWFAQLARQTTRDRI 323


>gi|227833347|ref|YP_002835054.1| putative riboflavin biosyntheis protein ribF [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454363|gb|ACP33116.1| putative riboflavin biosyntheis protein ribF [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 339

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 152/324 (46%), Gaps = 20/324 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
            +++ I+   S+P  L    V IG FDG+H GH  ++ +A++ A        +++F+PHP
Sbjct: 18  DIWYGID---SIPADLGPTSVTIGVFDGLHRGHQQLVTKAVEHARRHGQRAVMVTFDPHP 74

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            T+        ++     + ++ E+MG  A++   FT E       +++  +LV  L  +
Sbjct: 75  VTVFLPERAPLSVITFERRMQLAEEMGIEAVLVIDFTEELRGVEPREYVTDLLVGRLHTE 134

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FG   +G    L + G + GF    +  L ++  + + S+NIR AL KG +
Sbjct: 135 HVVVGENFTFGAGASGTAEALAEFGAELGFGVDIV-PLLDDDGERICSTNIRAALAKGDI 193

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT- 236
             A   LG  FT+   V+ G   G   LGFPTAN      + +  +GVYA  F  +    
Sbjct: 194 ARANWALGRHFTVTGPVVRGAGRGGKELGFPTANQYFPESVAIPADGVYAGWFVVEPTGA 253

Query: 237 ----------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ESF+ D   ++YG   TV F D++R   
Sbjct: 254 PLEGDMEPGVPYPAAISVGTNPTF-GDEERSVESFVLDRDADLYGHEATVHFVDHVRDME 312

Query: 287 KFKDIEKLKIYMGEDEKKARKILE 310
           KF  +E+L   M  D  + R+IL 
Sbjct: 313 KFNSVEELLTAMERDVARVREILA 336


>gi|240171313|ref|ZP_04749972.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium kansasii ATCC 12478]
          Length = 324

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 20/325 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ +G FDG+H GH  ++  A+K       P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRTRGVPTVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + +++I ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRYIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+   L++ GE++GF       + E  ++++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVHTLRRAGERFGFAVEAMSLVSEHHSHETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ G   G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVMAATEALGRPHRVEGVVVRGYGRGAELGFPTANIAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPATGAVIPGERYQAAVSIGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALDFVARIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKIL 309
           + KF+ +  L   +  D ++ R +L
Sbjct: 297 QKKFESVRDLVAEIAADTERTRALL 321


>gi|28199319|ref|NP_779633.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa Temecula1]
 gi|182682044|ref|YP_001830204.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa M23]
 gi|28057425|gb|AAO29282.1| riboflavin kinase / FAD synthetase [Xylella fastidiosa Temecula1]
 gi|182632154|gb|ACB92930.1| riboflavin biosynthesis protein RibF [Xylella fastidiosa M23]
 gi|307578312|gb|ADN62281.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 315

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 108/311 (34%), Positives = 167/311 (53%), Gaps = 8/311 (2%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           VF +IE     P   +G V  IG FDG+HLGH  ++  A++ A   + P   LSF P PR
Sbjct: 4   VFRHIEGGMLFP---QGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+  L V+ 
Sbjct: 61  EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  + +S++ IR  L  G   
Sbjct: 121 VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNER-ISATKIRALLAAGDFA 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       +  +  
Sbjct: 180 HAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIAL-SGIYATWVHGIFEQPWPS 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +   +  
Sbjct: 239 VSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHR 297

Query: 301 DEKKARKILES 311
           D ++AR IL  
Sbjct: 298 DAQQARHILSE 308


>gi|255693085|ref|ZP_05416760.1| riboflavin biosynthesis protein RibF [Bacteroides finegoldii DSM
           17565]
 gi|260621125|gb|EEX43996.1| riboflavin biosynthesis protein RibF [Bacteroides finegoldii DSM
           17565]
          Length = 322

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  +I   +  P      +  IG FDG+H GH  ++ Q  +IA        +++F  H
Sbjct: 1   MQIIRDISTLRPEP-----SIATIGFFDGVHTGHRYLIRQVKEIAAAKGLRSALVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      L+ P  + ++L+ +G    +   FT E +  +A +F+ +VL E  +V
Sbjct: 56  PRKVMNADYRPELLTTPEEKIRLLDDIGVDYCLMLNFTPEISRLTAREFMAQVLKERYQV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN------KSQIVSSSNIRT 172
           K ++ G   RFG +R+       + G++ G   +      NN      ++  +SSS IR 
Sbjct: 116 KCLVIGYDHRFGHNRSEGFEDYVRYGKEIGIEVIRAHAYTNNIKTGEHQNTPISSSLIRK 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRF 230
            L +G V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+  
Sbjct: 176 LLHEGEVEQAALCLGYEYFLDGTVVGGYQVGRKIGFPTANLSVDDPDKLIPADGVYAVW- 234

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
            T D  +Y G+ N G  PT+       +E  I  F   IY +   ++F    RPE+KF D
Sbjct: 235 VTFDGQTYMGMLNIGVRPTIDNGPNRTIEVNILHFHSNIYDKFIRLTFVKRTRPELKFAD 294

Query: 291 IEKLKIYMGEDEKKARKIL 309
           I++L + + +D ++   IL
Sbjct: 295 IDELIVQLHKDAEETETIL 313


>gi|326382954|ref|ZP_08204644.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198544|gb|EGD55728.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 303

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/303 (32%), Positives = 143/303 (47%), Gaps = 15/303 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDGIH GH  ++  A K       P  +++F+PHP ++++S +    LS    + 
Sbjct: 2   VTIGVFDGIHRGHAQLIAAATKAAAERGVPSVLMTFDPHPSSVVRSGAYPPQLSTLRRRA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++ E++G        F+   +  S E F+  VLVE L    V+ G  F FG    GD   
Sbjct: 62  ELAEELGIDVFCVIPFSPTLSAQSPEDFVHSVLVEELHAAEVVVGDNFTFGHKALGDVPR 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ GE++GF    I +L    +   SS+ IR+ +  G V  AA  LG    +E  V+HG
Sbjct: 122 LRELGERFGFEVTAI-KLFGEHAVTYSSTYIRSCVAAGDVELAAEALGRPHRVEGVVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ----------TSYSGVANFGRNP 248
           E+ GR LGFPTAN+       +  +GVYA  F   D             Y    + G NP
Sbjct: 181 ERRGRDLGFPTANVAPPEHTAIPGDGVYAAWFTVLDSATEPEGITIGARYPAAVSVGTNP 240

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T        +E+++ D S + YGQ   V F   LR    F  I+ L   M  D ++ R +
Sbjct: 241 TF-SGRVRTVEAYVLDVSADFYGQHVAVDFVSRLRGMEPFDSIDALIAEMNNDVERTRTL 299

Query: 309 LES 311
           L +
Sbjct: 300 LGA 302


>gi|116495051|ref|YP_806785.1| FAD synthase [Lactobacillus casei ATCC 334]
 gi|191638554|ref|YP_001987720.1| Bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus casei BL23]
 gi|227534938|ref|ZP_03964987.1| FAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|116105201|gb|ABJ70343.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus casei
           ATCC 334]
 gi|190712856|emb|CAQ66862.1| Bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           (EC 2.7.1.26) [Lactobacillus casei BL23]
 gi|227187395|gb|EEI67462.1| FAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 315

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 99/300 (33%), Positives = 152/300 (50%), Gaps = 9/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS--SSPIFTLS 73
           +  V+ +G FDG+H GH  +++   KIA     P+ V++FN HP  + +    + I  LS
Sbjct: 18  QPIVLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLS 77

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + KI++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK  
Sbjct: 78  TREEKIKIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLV-GLKADTVVAGFDYTYGKRD 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                +L K      F  + + EL  N  Q VSS+ IR AL    +  A   LGY +T  
Sbjct: 137 VASMALLPKYACGR-FDVISVPELAEN-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTA 194

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   
Sbjct: 195 GKVVHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGA 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R    + 
Sbjct: 254 DRDVTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVRDYFAAK 313


>gi|256750796|ref|ZP_05491681.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750379|gb|EEU63398.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 316

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 102/291 (35%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI     NN    V +F  H   I+    P   ++    +
Sbjct: 17  VIALGNFDGVHIGHQKLIKQAIFLSKENNLTSAVFTFKQHTSKILTPDKPPELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI K+LVE L ++  + G  +RFG    G+  
Sbjct: 77  VEILKQFNLDYGIFFDFTENFSKLAAEEFIIKILVELLNIRIAVVGHNYRFGYKALGNVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    +  +   +  +VSSS IR  +  G +  A  LLG  F+++ +VIH
Sbjct: 137 TLKKYSKIYSYKVYVVPPV-IREGVVVSSSYIRELIKSGKIEKANELLGRFFSLQGEVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R +  D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISGDLVLPKAGVYVTRVKIDD-KFYIAVTNVGSKPTF-GGKNIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES+I D+++ +Y +   V F   +R EIKFK++E LK  + +D   A+  
Sbjct: 254 VESYILDYNENLYDKYLEVEFITRIRDEIKFKNVEALKEQVFKDINYAKNF 304


>gi|189465323|ref|ZP_03014108.1| hypothetical protein BACINT_01671 [Bacteroides intestinalis DSM
           17393]
 gi|189437597|gb|EDV06582.1| hypothetical protein BACINT_01671 [Bacteroides intestinalis DSM
           17393]
          Length = 305

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  NI      P      V  IG FDG+H GH  ++EQ  + A        V++F  H
Sbjct: 1   MQLLRNIPEVLPQP-----CVATIGFFDGVHRGHRYLIEQVREAAVACGFASGVVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q       L+    +  +L + G    +   FT E A  SA +F+  +      +
Sbjct: 56  PRKVVQPEYRPELLTTYEEKVSLLAETGLDYCMMLDFTPEIAILSAREFMLFLR-NHYNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G++ G     +     NK   VSSS IR  L +G+
Sbjct: 115 RALVIGYDHRFGHNRSEGFDDYVRYGQELGIKV-ILARAYINKETTVSSSVIRQLLLEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + +   V+ G ++GR +GFPTAN+++     ++  +GVYA+R     QT
Sbjct: 174 VSEAADCLGYDYFLNGSVVSGYRVGRKIGFPTANLRVDDPDKLVPSDGVYAVRVIVAGQT 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ + G  PTM       +E  IF+F  +IY Q   + F  YLR E+KF  I++L  
Sbjct: 234 -YGGMLSIGYRPTMANGTDRSIEVNIFNFHSDIYEQHIRLFFVRYLRSELKFDSIDELIA 292

Query: 297 YMGEDEKKARKIL 309
            + +D + A + L
Sbjct: 293 QLHKDAENASRYL 305


>gi|195953646|ref|YP_002121936.1| riboflavin biosynthesis protein RibF [Hydrogenobaculum sp. Y04AAS1]
 gi|195933258|gb|ACG57958.1| riboflavin biosynthesis protein RibF [Hydrogenobaculum sp. Y04AAS1]
          Length = 296

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 8/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+GNFDG+HLGH  +L   +  A    +   VL F+PHP  +++  S    +   
Sbjct: 4   KPIALAVGNFDGVHLGHQHLLNTLVSKAKEKNLVPSVLMFDPHPLEVLEKESAPCIIYTI 63

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +++ + K+G   +    FT E +N SA  FI+  + E L  K +I G  +R+G  R G
Sbjct: 64  EERKEYIYKLGVENIFVINFTKEFSNISARDFIKDYVYEKLNTKLLIVGYDWRYGAKREG 123

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  + ++ GE +GF  +  +  + +   IVSS+ IR  L +    +    LG  +TI+  
Sbjct: 124 EFELAKEMGEMFGFEVIPSEPYKVD-GHIVSSTLIRRLLKEAKFEDVKKYLGREYTIKRR 182

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+ +G  +GFPTAN+  + ++ LKEGVY ++        Y GVAN+G+ PT+     
Sbjct: 183 VVRGKGLGSKIGFPTANISNTSNMCLKEGVYVVKVNG-----YLGVANYGKRPTVEYTNQ 237

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +LE  I DF   +     +++F  +LR E KF  IE LK+ +  D + A+ +  + 
Sbjct: 238 NILEVHIIDFKGNLTDNILSITFLGFLREEKKFNSIEDLKVQIKTDIETAKSLFSNK 294


>gi|1167773|emb|CAA64624.1| regulatory protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 316

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +  +       V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ S +QFI + ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMKTMPD--DLDGKAGCTMVEKLTEQDKKISSSYIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I+  VIH +K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELANVLLGQPYFIKGIVIHNDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT     P    +E  +FDF+QE+YG    + ++  +R E KF  I++L
Sbjct: 237 VYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFNQEVYGAAIKIEWYKRIRSERKFNGIKEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +   +
Sbjct: 297 TEQIEKDKQEAIRYFSN 313


>gi|291484222|dbj|BAI85297.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. natto BEST195]
          Length = 316

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +  +       V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGLTLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ S +QFI + ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMKTMPD--DLDGKAGCTMVEKLTEQDKKISSSYIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELANVLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L
Sbjct: 237 VYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +   +
Sbjct: 297 TEQIEKDKQEAIRYFSN 313


>gi|88801806|ref|ZP_01117334.1| riboflavin biosynthesis protein RibF [Polaribacter irgensii 23-P]
 gi|88782464|gb|EAR13641.1| riboflavin biosynthesis protein RibF [Polaribacter irgensii 23-P]
          Length = 344

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/299 (31%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   V IG FDG+H GH  ILE+ +           +L+F PHPR ++Q  + I  ++  
Sbjct: 48  EKTFVTIGTFDGVHFGHQKILEKLVFEAKQAGKKSVLLTFFPHPRMVLQKDAKIEMINTI 107

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +LEK G   LI + F+   +  +A +F++  LV  L +  +I G    FGK+R G
Sbjct: 108 HERSALLEKTGLDYLIIHPFSKAFSKTTALEFVRDTLVNKLNISKLIIGYDHHFGKNREG 167

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L +    Y F    I   ++     +SS+ IR AL  G +  A   LGY F +   
Sbjct: 168 NITQLTEHSLVYNFTVEEI-LAQDIDDVSISSTKIRQALISGSLKTANKYLGYPFMLNGI 226

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V++G+++G  +G+PTAN+ +     ++ K GVY ++   Q++  + G+ N G  PT+  N
Sbjct: 227 VVNGKQLGGKIGYPTANIDIKETYKLIPKAGVYVVKSNIQNKIIF-GMMNIGCRPTVDGN 285

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
               +E   FDF+Q++YG+  TV    +LR E KF  I  L   + +DE  AR  ++ +
Sbjct: 286 HQ-TIEVHFFDFNQDLYGKHLTVELLYFLRDEHKFDAIPLLIAQLKKDEDTARDYIKDN 343


>gi|42519356|ref|NP_965286.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           NCC 533]
 gi|41583644|gb|AAS09252.1| riboflavin kinase/FMN adenylyltransferase [Lactobacillus johnsonii
           NCC 533]
          Length = 312

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   K  ++ +G FDG+H+GH  +++  + I    + P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAEQKHLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT E +  S + F+ +V V  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLSPQDFVDQV-VMKLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L K  +      + ++  +      V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGPKDIANVENLPKFAKDRFK--IVVEPKQAIDKIKVGSTYIRKAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAAELLGQPYETSGIIVHGFRRGHKIGFPTANLEISGSKVLPAEGVYATRAKVNG-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IFDF +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFDFDEEAYGKPLTLAWYKFIRKNKKFSGIEELSHQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRDIKQYF 307


>gi|284044680|ref|YP_003395020.1| riboflavin biosynthesis protein RibF [Conexibacter woesei DSM
           14684]
 gi|283948901|gb|ADB51645.1| riboflavin biosynthesis protein RibF [Conexibacter woesei DSM
           14684]
          Length = 303

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 14/289 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA+G FDG+HLGH  ++  +         TVL+F PHP  +++  +    L+   ++ ++
Sbjct: 16  VAVGEFDGVHLGHRAVIAGSD--------TVLTFEPHPLAVVRPEAAPKLLTSLELKAEL 67

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +  +G   LI   F    A+ SA+ FI  VL+  L    V  G  FRFG    GD  +L+
Sbjct: 68  IAGLGVEELIVVPFDDAFAHQSAQAFIDDVLLAKLGATHVSVGENFRFGHGAKGDTALLR 127

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                  F    +  L   + +I+SSS++R  +  G V +A+  LG  F I   V HGEK
Sbjct: 128 A---DRRFEARVV-PLVEIEGEIISSSHVRGLVLAGEVEHASRFLGGSFRIRGTVAHGEK 183

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNGPLLLE 259
            GR LGFPTAN++  P+++    GVYA R        +Y G  N G  PT      +L+E
Sbjct: 184 RGRELGFPTANLEPDPELVCPGHGVYATRVTWEGGGKTYCGATNVGVRPTFETGLGVLIE 243

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +F+ DF  ++Y ++ TV F   LR E +F   E+L   M  D   AR +
Sbjct: 244 AFVVDFDGDLYDKQLTVEFLRRLRGEQRFDSAEQLIEQMHRDVAAARTV 292


>gi|229544440|ref|ZP_04433498.1| riboflavin biosynthesis protein RibF [Bacillus coagulans 36D1]
 gi|229324925|gb|EEN90602.1| riboflavin biosynthesis protein RibF [Bacillus coagulans 36D1]
          Length = 320

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 154/318 (48%), Gaps = 8/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M        +   P       +A+G FDGIHLGH  +++ A  I   N     V++F PH
Sbjct: 1   MKTITVHHPHSFKPGDFPPLAIALGYFDGIHLGHQKVIKTARGIAEKNGWKSAVMTFEPH 60

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++      I  ++P   + K++EK+G   L   +FT   A+   +QF+ +  +  L 
Sbjct: 61  PSIVLGKKKDGIELITPLEDKIKLIEKLGVDYLFVVRFTSRFASLLPQQFVDQY-LAALG 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  + +GK   G+   L +        TV       N  + VSS+ IR+ + +G
Sbjct: 120 VKHVVAGFDYTYGKFGKGNMENLPEYANGRFGITVIEKLALENTGEKVSSTLIRSKIREG 179

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
            V     LLG  + I+  V+HGEK GR LGFPTAN++L +  +L   GVY ++ +  D T
Sbjct: 180 KVGEVKPLLGRDYEIKGIVVHGEKRGRQLGFPTANLKLTASYMLPPNGVYIVQMKVAD-T 238

Query: 237 SYSGVANFGRNPTMV--PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            ++G+ + G NPT           E ++ DFS  IYG+   V +   +R E KF  +E L
Sbjct: 239 WHNGLCSIGYNPTFKNPEEYEKTTEVYLLDFSDTIYGEEAVVKWLARIREEKKFARVEDL 298

Query: 295 KIYMGEDEKKARKILESS 312
              M  DE  AR+  E  
Sbjct: 299 IEEMKRDETAARRYFEKQ 316


>gi|311739670|ref|ZP_07713505.1| riboflavin biosynthesis protein RibF [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311305486|gb|EFQ81554.1| riboflavin biosynthesis protein RibF [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 340

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 22/338 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
            +++ I+    +P  +    V IG FDG+H GH  ++   ++ A        +++F+PHP
Sbjct: 5   DIWYGID---DIPAEVGPTSVTIGVFDGLHRGHQQLISACVEHARAHGERPVMVTFDPHP 61

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++        ++     + ++ E+MG +A++   FT + A      +++ +LV  L  +
Sbjct: 62  VSVFLPERAPLSVLSFERRLELAEEMGIAAVLVIDFTRDLAGVEPRPYVEDLLVGKLAAQ 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  F FG    G    +Q  G ++GF    +  L ++K   + S++IR  L +G +
Sbjct: 122 HIVVGENFTFGAGATGTAQAMQDFGAEFGFSVDIV-PLLDDKGVRICSTHIRECLAQGDI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
            +A   LG  FT+   V+ G   G   LGFPTAN      + +  +GVYA  F     +S
Sbjct: 181 ESANWALGRHFTVTGPVVRGAGRGGKELGFPTANQYFPDTVAIPADGVYAGWFIVHSDSS 240

Query: 238 ----------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +K
Sbjct: 241 IEGDMRPGVAYAAAISVGTNPTF-GDEERSIESFVLDRDADLYGYEATVHFVGHLRDMVK 299

Query: 288 FKDIEKLKIYMGEDEKKARKILES---SYPLSERDRII 322
           F  +++L   M  D  KAR++L +   +   + +D  +
Sbjct: 300 FNSVDELLEAMVNDVAKARQVLAADAKAQGWTAKDYFL 337


>gi|227890221|ref|ZP_04008026.1| FAD synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849223|gb|EEJ59309.1| FAD synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 312

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   K  ++ +G FDG+H+GH  +++  + I    N P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITTKKVILTLGFFDGVHIGHQKLIKDAKLIAKQKNLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT E +  S + F+ +V V  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETEQEKERKMEKLGVDYLVIIKFTKEFSQLSPQDFVDQV-VMKLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L +  +      + ++  +      V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGSKDIANVENLPQFAKDRFK--IVVEPKQAIDKIKVGSTYIRKAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAVELLGQPYETSGVIVHGFRRGHKIGFPTANIEISGSKVLPAEGVYATRAKING-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGEPLTLAWYKFIRKNKKFSGIEELSHQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRDIKQYF 307


>gi|87125479|ref|ZP_01081324.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9917]
 gi|86166779|gb|EAQ68041.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. RS9917]
          Length = 308

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 5/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P   +    +A+G+FDG+H GH  +++           +V+SF PHPR ++    P   L
Sbjct: 7   PQQARTPSALALGSFDGLHAGHRRVIDAVCGDPCGGLPSVVSFWPHPREVLHGE-PRLRL 65

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             PS +  +LE +G   L+   F  + A   AE F+ +VL+  L+ + +  G  FRFG+D
Sbjct: 66  DLPSEKVDLLEPLGIEQLVLVPFDQQLAGLQAEDFVDQVLLTTLQARHIAVGANFRFGRD 125

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD   L++  E+ G     +  L ++  ++ SSS IR AL  G +  A+ LLG  +  
Sbjct: 126 RTGDTDTLRRLCERAGVRVSVLPILEDDGGRM-SSSRIRAALGAGDLARASALLGRAYRF 184

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTM 250
              V+ G  +GR LG+PTAN+Q+     L   GVYA     QD+      V N G  PT+
Sbjct: 185 SGRVVRGRGLGRELGWPTANLQVDGRKFLPGLGVYAAWAFLQDKGERLPAVMNLGPQPTV 244

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + D   E+ G+  TV   + LR + +F  +E+L   +G D ++AR  L+
Sbjct: 245 DPTSPSAVEVHLLDTRLELEGRELTVEPVERLRGQQRFSGLEELSAQIGLDAQRARLRLQ 304

Query: 311 S 311
           +
Sbjct: 305 A 305


>gi|325102997|ref|YP_004272651.1| riboflavin biosynthesis protein RibF [Pedobacter saltans DSM 12145]
 gi|324971845|gb|ADY50829.1| riboflavin biosynthesis protein RibF [Pedobacter saltans DSM 12145]
          Length = 330

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/336 (29%), Positives = 172/336 (51%), Gaps = 31/336 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++++I+    +    +   V IG FDG+H+GH  I+ Q  + A   N    +L+F PH
Sbjct: 1   MKIYNHIDEFIPI----ENATVTIGTFDGVHIGHQKIISQLKEEAKRINGETVILTFFPH 56

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR I+      +  ++    + ++L+++G   LI   FT + +N S E++I+ +LV+ + 
Sbjct: 57  PRMILHPEDHSLKLITTMPEKAELLKQLGVDHLIITPFTRDFSNLSPEEYIKNILVDKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K+++ G   RFGKDR+G    LQ   + YG+    I E ++     +SS+ IR AL  G
Sbjct: 117 TKSIVIGYDHRFGKDRSGGLPELQTYAKTYGYQVTEIPE-QDINEITISSTKIREALKNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQ-- 233
            V +A   LG+ F +   VI G++IGRTLG+PTAN+ +  +  ++  +G+YA+       
Sbjct: 176 DVHHANEFLGHAFQLNGKVIKGDQIGRTLGYPTANLFIEEEYKLIPSDGIYAVEVFVDSS 235

Query: 234 ------------------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCT 275
                                 + G+A  G  PT+       +E  IFDF+++IY  R  
Sbjct: 236 VKNKNQEIINPYGTENTSGNNKFLGMAYIGHRPTIN-GMSQNIEVNIFDFNEDIYHSRIK 294

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + F+ ++R +IKF  +++LK  +  D+    +   +
Sbjct: 295 LVFWHFIRHDIKFSSLDELKNQLANDKIAVLEKFST 330


>gi|16078730|ref|NP_389549.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309545|ref|ZP_03591392.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221313869|ref|ZP_03595674.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221318792|ref|ZP_03600086.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323064|ref|ZP_03604358.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|34395971|sp|P54575|RIBC_BACSU RecName: Full=Riboflavin biosynthesis protein ribC; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1592690|emb|CAB02559.1| FMN adenylyltransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634039|emb|CAB13540.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 316

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 160/317 (50%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H    +  +       V+A+G FDG+HLGH  ++  A +IA    +   V++F+PH
Sbjct: 1   MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLTLAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ S +QFI + ++  L 
Sbjct: 61  PSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNEVFASLSPKQFIDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMKTMPD--DLDGKAGCTMVEKLTEQDKKISSSYIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELANVLLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT     P    +E  +FDF+QE+YG    + ++  +R E KF  I++L
Sbjct: 237 VYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFNQEVYGAAIKIEWYKRIRSERKFNGIKEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +   +
Sbjct: 297 TEQIEKDKQEAIRYFSN 313


>gi|239631354|ref|ZP_04674385.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301066614|ref|YP_003788637.1| FAD synthase [Lactobacillus casei str. Zhang]
 gi|239525819|gb|EEQ64820.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300439021|gb|ADK18787.1| FAD synthase [Lactobacillus casei str. Zhang]
          Length = 315

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 9/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS--SSPIFTLS 73
           +  V+ +G FDG+H GH  +++   KIA     P+ V++FN HP  + +    + I  LS
Sbjct: 18  QPIVLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLS 77

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + +I++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK  
Sbjct: 78  TREEKIRIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLV-GLKADTVVAGFDYTYGKRD 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                +L K      F  + + EL  +  Q VSS+ IR AL    +  A   LGY +T  
Sbjct: 137 VASMALLPKYARGR-FDVISVPELAED-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTA 194

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   
Sbjct: 195 GKVVHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGA 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R    + 
Sbjct: 254 DRDVTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVRDYFAAK 313


>gi|60683569|ref|YP_213713.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           NCTC 9343]
 gi|253566562|ref|ZP_04844015.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|60495003|emb|CAH09821.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           NCTC 9343]
 gi|251944734|gb|EES85209.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301165082|emb|CBW24650.1| putative riboflavin biosynthesis protein RibF [Bacteroides fragilis
           638R]
          Length = 313

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 11/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  NI      P      V  IG FDG+H+GH  ++EQ  ++A        +++F  H
Sbjct: 1   MQIIRNIPGVLPEP-----CVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      L+    +  +LE+ G        FT E ++ +A +F+  +L +   V
Sbjct: 56  PRKVMNADYRPELLTTSEEKLALLEETGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG +R+       + G + G   +       +    +SSS IR  L +G 
Sbjct: 116 QTLVIGYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDD-LHISSSVIRKMLHQGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+       T
Sbjct: 175 VDRAARCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLVPADGVYAVHVTFDGHT 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+G+ N G  PT+       +E  I  F  +IY +   +SF  YLRPE+KF  IE L  
Sbjct: 235 -YNGMLNIGTRPTIGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIA 293

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D      +L     +
Sbjct: 294 QLHQDAADVEALLGKIQNV 312


>gi|224537672|ref|ZP_03678211.1| hypothetical protein BACCELL_02554 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520731|gb|EEF89836.1| hypothetical protein BACCELL_02554 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 305

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  NI      P      V  IG FDG+H GH  ++EQ  ++A  +     V++F  H
Sbjct: 1   MQLLRNIPEVLPQP-----CVATIGFFDGVHRGHRYLIEQVREVAVAHGFASGVVTFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q       L+    +  +L + G    +   FT E A  SA++F+  +      +
Sbjct: 56  PRKVVQPEYHPELLTTYEEKVTLLAETGLDYCMMLDFTPEVAILSAKEFMLFLY-NHYNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G++ G     +     +K   VSSS IR  L++G+
Sbjct: 115 RALVIGYDHRFGHNRSEGFDDYVRYGQELGIKV-ILAHAYIDKDVAVSSSVIRQLLSEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + +   V+ G ++GR +GFPTAN+++     ++  +GVYA+R     Q 
Sbjct: 174 VSEAASCLGYDYFLNGIVVSGYRVGRKIGFPTANLRVDDPDKLVPSDGVYAVRVTVAGQ- 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           SY G+ + G  PTM       +E  IF+F  +IY Q   +SF  YLRPE+KF  I++L  
Sbjct: 233 SYGGMLSIGYRPTMANGTDRSIEVNIFNFHSDIYEQYICLSFVRYLRPELKFDSIDELIA 292

Query: 297 YMGEDEKKARKIL 309
            + +D++ A + L
Sbjct: 293 QLHKDKEIASRYL 305


>gi|56963989|ref|YP_175720.1| riboflavin biosynthesis protein RibC [Bacillus clausii KSM-K16]
 gi|56910232|dbj|BAD64759.1| riboflavin biosynthesis protein RibC [Bacillus clausii KSM-K16]
          Length = 317

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 9/298 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII-QSSSPIFTLSPP 75
              +A+G FDG+H GH  ++E A   A        V++F PHP+ ++ +   PI  L+P 
Sbjct: 19  PTAMALGYFDGVHKGHKAVIETAKAEAAKRGIQSAVMTFYPHPKEVLGKPDQPIDYLTPL 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L+ +G   +    FT   +  + + FI++ ++  L VK V+ G  F +G    G
Sbjct: 79  QAKVARLKALGVDVVYVVHFTKAFSKLTPQAFIERFVI-GLNVKHVVAGFDFTYGVKGEG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               + +       HT    E  +++ + +SS+ IR  L++G+V  AA LLGY +     
Sbjct: 138 KMDDIDRYANGRFTHTTV--EQVSDEQEKISSTRIRKQLSEGNVSEAASLLGYPYVFSGT 195

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN- 253
           V+HG+  GR +G+PTAN+      I+ K GVY +       T Y G+AN G  PT V + 
Sbjct: 196 VVHGDARGRLIGYPTANIVAKERFIVPKTGVYVVTLTHAGNT-YEGMANIGYKPTFVDDL 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              ++E  IFDF+QEIYG+   V+F++ +R E KF  I+++K  +G D   A +  + 
Sbjct: 255 AKPIVEVNIFDFNQEIYGETVEVAFYERIRSEQKFSGIDEIKAQLGRDRATALQFFKQ 312


>gi|227488663|ref|ZP_03918979.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091376|gb|EEI26688.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 336

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 24/340 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+++  ++     P+ +   VV IG FDG+H GH  ++ +A++ A+    P  +++F+PH
Sbjct: 1   MNIWPGLD---EFPHDIGKTVVTIGVFDGVHRGHQKLICRAVEKAHELGLPCVMITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I+  +    L     + +  +++G   ++  +F    ++   E F + VL + +  
Sbjct: 58  PLAVIRPQAMPPILGTVEQRARRADELGVDHIVALQFDRALSSLEPEDFFEHVLQDKIHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG   AG    LQK GEKYG     ++ L+++  + + S+ IR AL  G 
Sbjct: 118 AAVLVGENFTFGHKAAGTTETLQKLGEKYGVEVDVVELLKDH-GERICSTMIRKALLLGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ- 235
           +      LG  FT+ S V+ G    G  LG+PTANM   PD+ +  +GVYA  F   D+ 
Sbjct: 177 IRKVNWALGRPFTVRSLVVRGAGRGGAELGYPTANMYFGPDVAIPADGVYAGFFTVLDEA 236

Query: 236 -------------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
                          Y    + G NPT   +    +ESF+ D   ++YG+ C V F D++
Sbjct: 237 PSTAPIEGTMKPGVRYMTAVSVGSNPTF-GDERRSVESFVLDEHADLYGRYCRVEFIDFI 295

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKIL-ESSYPLSERDRI 321
           R   KF  +++L  +M  D  KAR+IL ++  P+     I
Sbjct: 296 RGMEKFSSVDELLTHMDRDVAKAREILADADTPVEHLKEI 335


>gi|260578911|ref|ZP_05846815.1| riboflavin biosynthesis protein RibF [Corynebacterium jeikeium ATCC
           43734]
 gi|258602963|gb|EEW16236.1| riboflavin biosynthesis protein RibF [Corynebacterium jeikeium ATCC
           43734]
          Length = 380

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/328 (29%), Positives = 156/328 (47%), Gaps = 26/328 (7%)

Query: 3   VFHNIEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           +++ ++    +P HL   G VV IG FDG+H GH  +L++A+++A     P  + +F+PH
Sbjct: 57  IWYGLD---RIPEHLAAGGTVVTIGVFDGVHRGHQQLLQRAVELARERGVPSVMFTFDPH 113

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  +    LS    + ++  + G   ++   FT + A++S E+++ +VLV+ L  
Sbjct: 114 PTVVFKPDAVPPLLSSVRRRAELAHEYGIDHVVVVSFTKQIASWSPEEYVDQVLVKMLNA 173

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FG   AG    L++ G   G     + EL  +   +V S+ IR AL +G+
Sbjct: 174 KAVVVGDNFTFGHKAAGTPETLRELGAARGMRVDVL-ELLEDGDHVVCSTWIRQALAEGN 232

Query: 179 VLNAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD-- 234
           V  A   LG  F +  +V H   + GR LGFPTAN+  +    L  +GVYA         
Sbjct: 233 VDGANEALGRHFRVAGEVTHGAGRGGRALGFPTANLYFAEKFALPADGVYAGYVTILPGH 292

Query: 235 -------------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
                                + G NPT   + P  +ESFI D   ++YG    V F  +
Sbjct: 293 GISTGATIGTMPVGERLPAAISVGTNPTF-GHEPRSVESFILDHDADLYGLDIAVEFVHH 351

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LR    +  +++L   +G D    RK L
Sbjct: 352 LRGMETYNSLDELIEAIGRDVTDTRKAL 379


>gi|258511419|ref|YP_003184853.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478145|gb|ACV58464.1| riboflavin biosynthesis protein RibF [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 325

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/303 (32%), Positives = 146/303 (48%), Gaps = 11/303 (3%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFT- 71
           P      V+AIG FDG+HLGH  IL  A  +      + V+SF PHP   +  +      
Sbjct: 11  PASTAPQVLAIGKFDGVHLGHRAILNAARGLLTPEEWLAVMSFEPHPTYALTGNPEYARW 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   + ++  ++G  A    +F           F+   LV  L V+ V+ G  FRFG+
Sbjct: 71  LTPRRERVRLFTELGVDAFYVARFDRAFQQLEPAAFVDGYLVP-LRVRHVVVGPDFRFGR 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              G   +L+  G + GF    +  +  +    +SSS IR  L +G V  A  LLG  + 
Sbjct: 130 GGQGTVDVLRDLGRERGFDVQVVQPVEEH-GHKISSSRIREHLREGRVEAAQALLGRPYV 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS-----YSGVANFG 245
           +  +V+HG+K GRT+GFPTAN+  +   +L K GVYA     ++          GV N G
Sbjct: 189 VSGEVVHGDKRGRTIGFPTANLGGIDAYVLPKAGVYAAFVEVEEAHHTCSAHAFGVLNAG 248

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+       LE  + DF  ++YG+   VSF   +R E KF+ +E LK  +  D + A
Sbjct: 249 YRPTV-DGRAFQLEVHLLDFDGDLYGKTLRVSFLRRIRDETKFESLEALKAQIARDCEVA 307

Query: 306 RKI 308
           R +
Sbjct: 308 RAL 310


>gi|189460635|ref|ZP_03009420.1| hypothetical protein BACCOP_01276 [Bacteroides coprocola DSM 17136]
 gi|189432594|gb|EDV01579.1| hypothetical protein BACCOP_01276 [Bacteroides coprocola DSM 17136]
          Length = 308

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +     I   +   L   V  IG FDG+H GH  +++Q  K A        +++F  H
Sbjct: 1   MKI-----ITDEIKQTLLPCVATIGCFDGLHRGHRFLIKQVCKEARQRNFHSALITFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++QSS     L+    +  ++++      I   FT E +  SA +F+Q +  E   V
Sbjct: 56  PRQVMQSSYRPQWLTCLPQKTALIQQTEADYCIMLPFTKELSLLSAREFMQLLR-ERFNV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R        + G++ G   +    L       +SSS IR  L  G 
Sbjct: 115 RVLVIGYDHRFGHNRCEGFDDYCQYGKELGIEVIRAQAL-IEDGVSISSSVIRKVLKDGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           + +A H LGY + ++  V+ G K+GR LGFPTAN+       ++ KEGVYA+     D+ 
Sbjct: 174 IQHANHYLGYHYYLDGTVVDGYKVGRKLGFPTANLLPSCPDKLIPKEGVYAVYAYI-DEV 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+G+ N G  PT+     L +E  I +FS +IY     + F +++R E KF  +EKL  
Sbjct: 233 RYAGMLNIGHRPTVDNGSNLSIEVHILNFSGDIYNHHMRIEFIEFIRQEQKFDSLEKLIT 292

Query: 297 YMGEDEKKARKIL 309
            +  D +   ++L
Sbjct: 293 QLNTDRETVSRLL 305


>gi|295698741|ref|YP_003603396.1| riboflavin biosynthesis protein RibF [Candidatus Riesia
           pediculicola USDA]
 gi|291157128|gb|ADD79573.1| riboflavin biosynthesis protein RibF [Candidatus Riesia
           pediculicola USDA]
          Length = 311

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHP 59
           M +   I    ++ N   G  + IGNFD +H+GH +IL++ I+     SP  V+ F P P
Sbjct: 1   MKLIRGI---HNIRNQHYGCSLTIGNFDSVHIGHQMILKKLIQYKYPGSPTVVMIFEPQP 57

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                       L+    + K + +     L+   F    ++ + + FI ++L++ L ++
Sbjct: 58  IEFFLGKLAPARLTGLRDKIKYISEYEIDYLLCVNFNRSFSSLTPDDFIDQLLIKKLGIQ 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  F+FGK+R G+   L + G++YGFH          +   VSS++IR AL K  +
Sbjct: 118 LLVIGDDFQFGKNRLGNFNHLFQAGKRYGFHVFKTKSFF-KRGIRVSSTSIRQALMKDDL 176

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A +L+G  + +   VIHG+++G T+GFPTAN+      +  +GVY    +   + S  
Sbjct: 177 SLARNLIGRPYQLSGRVIHGKRLGSTIGFPTANLLFKYFTIAIKGVYVAEVQGILENSIR 236

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V N G  PT++      +E  + DF   IYG    +     LR E +F  I +LK  + 
Sbjct: 237 SVVNVGFRPTVM-GKNRQIEVHLIDFQTNIYGSHINIIIHKKLREEKRFNSIFELKKQIY 295

Query: 300 EDEKKARKILE 310
           ED  +A+K  +
Sbjct: 296 EDISQAKKFFK 306


>gi|227543268|ref|ZP_03973317.1| FAD synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227180955|gb|EEI61927.1| FAD synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 336

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 24/340 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+++  ++     P+ +   VV IG FDG+H GH  ++ +A++ A+    P  +++F+PH
Sbjct: 1   MNIWPGLD---EFPHDIGKTVVTIGVFDGVHRGHQKLICRAVEKAHELGLPCVMITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I+  +    L     + +  +++G   ++  +F    ++   E F + VL + +  
Sbjct: 58  PLAVIRPQAMPPILGTVEQRARRADELGVDHIVALQFDRALSSLEPEDFFEHVLQDKIHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG   AG    LQK GEKYG     ++ L+++  + + S+ IR AL  G 
Sbjct: 118 AAVLVGENFTFGHKAAGTTETLQKLGEKYGVEVDVVELLKDH-GERICSTMIRKALLLGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ- 235
           +      LG  FT+ S V+ G    G  LG+PTANM   PD+ +  +GVYA  F   D+ 
Sbjct: 177 IRKVNWALGRPFTVRSLVVRGAGRGGAELGYPTANMYFGPDVAIPADGVYAGFFTVLDEA 236

Query: 236 -------------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
                          Y    + G NPT   +    +ESF+ D   ++YG+ C V F D++
Sbjct: 237 PSTAPIEGTMKLGVRYMTAVSVGSNPTF-GDERRSVESFVLDEHADLYGRYCRVEFIDFI 295

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKIL-ESSYPLSERDRI 321
           R   KF  +++L  +M  D  KAR+IL ++  P+     I
Sbjct: 296 RGMEKFSSVDELLTHMDRDVAKAREILADADTPVEHLKEI 335


>gi|327382592|gb|AEA54068.1| FAD synthase [Lactobacillus casei LC2W]
 gi|327385790|gb|AEA57264.1| FAD synthase [Lactobacillus casei BD-II]
          Length = 315

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/300 (32%), Positives = 151/300 (50%), Gaps = 9/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQS--SSPIFTLS 73
           +  V+ +G FDG+H GH  +++   KIA     P+ V++FN HP  + +    + I  L 
Sbjct: 18  QPIVLTLGFFDGVHRGHQAVIKTGKKIALAKKIPLAVMTFNIHPAVVYRGVSETDIRYLY 77

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + KI++ +G   L    FT + A  + + F+ + LV  L+  TV+ G  + +GK  
Sbjct: 78  TREEKIKIMQSLGVDYLYVVHFTPDFAALTPQAFVDQYLV-GLKADTVVAGFDYTYGKRD 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                +L K      F  + + EL  N  Q VSS+ IR AL    +  A   LGY +T  
Sbjct: 137 VASMALLPKYACGR-FDVISVPELAEN-GQKVSSTRIRHALDSSDIDTANDFLGYTYTTA 194

Query: 194 SDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HGE  GR LGFPT N++ L    L   G+YA++ +    T Y G+A+ GRN T   
Sbjct: 195 GKVVHGEARGRLLGFPTINLETLGQQRLPGIGIYAVKVKV-GTTWYLGMASIGRNVTFGA 253

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + L   + +DE   R    + 
Sbjct: 254 DRDVTLEINLLDFNQMIYGETVQVRWYHYLRGEVKFAGADALIDQLKKDETAVRDYFAAK 313


>gi|262184333|ref|ZP_06043754.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium aurimucosum ATCC 700975]
          Length = 326

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 152/324 (46%), Gaps = 20/324 (6%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHP 59
            +++ I+   S+P  L    V IG FDG+H GH  ++ +A++ A        +++F+PHP
Sbjct: 5   DIWYGID---SIPADLGPTSVTIGVFDGLHRGHQQLVTKAVEHARRHGQRAVMVTFDPHP 61

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            T+        ++     + ++ E+MG  A++   FT E       +++  +LV  L  +
Sbjct: 62  VTVFLPERAPLSVITFERRMQLAEEMGIEAVLVIDFTEELRGVEPREYVTDLLVGRLHTE 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F FG   +G    L + G + GF    +  L ++  + + S+NIR AL KG +
Sbjct: 122 HVVVGENFTFGAGASGTAEALAEFGAELGFGVDIV-PLLDDDGERICSTNIRAALAKGDI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT- 236
             A   LG  FT+   V+ G   G   LGFPTAN      + +  +GVYA  F  +    
Sbjct: 181 ARANWALGRHFTVTGPVVRGAGRGGKELGFPTANQYFPESVAIPADGVYAGWFVVEPTGA 240

Query: 237 ----------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ESF+ D   ++YG   TV F D++R   
Sbjct: 241 PLEGDMEPGVPYPAAISVGTNPTF-GDEERSVESFVLDRDADLYGHEATVHFVDHVRDME 299

Query: 287 KFKDIEKLKIYMGEDEKKARKILE 310
           KF  +E+L   M  D  + R+IL 
Sbjct: 300 KFNSVEELLTAMERDVARVREILA 323


>gi|239826661|ref|YP_002949285.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Geobacillus
           sp. WCH70]
 gi|239806954|gb|ACS24019.1| riboflavin biosynthesis protein RibF [Geobacillus sp. WCH70]
          Length = 327

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M        +      L   V+A+G FDGIHLGH  ++  A+           V++F+PH
Sbjct: 1   MKTLFISHPHHIKKEKLPPTVMALGYFDGIHLGHQEVIRTAVNIAAEKGYKSAVMTFHPH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++ +       ++P   +E+++ ++G   L   +FT   A    +QF+ + ++ +  
Sbjct: 61  PSVVLGKKEQHTHFITPLKKKEQLIAQLGVDFLYIVEFTPAFAQLFPQQFVDQYIIGF-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F +G+   G    L          TV      +   + +SS+ +R  L  G
Sbjct: 120 VKHVVAGFDFTYGRLGKGTMETLPFHSRDQFTQTVV--PKLSIAGEKISSTYVRKLLKNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
            V     LLG  + +E  V++GE+ GRT+GFPTAN+ L    +L   GVYA++ +     
Sbjct: 178 EVEQLPRLLGRFYEVEGTVVNGERRGRTIGFPTANIALNDDYLLPAVGVYAVKVKI-GTA 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            + GV N G  PT          +E  IFDF+++IYG+  T+ +   LR E KF  +++L
Sbjct: 237 VFEGVCNVGYKPTFHSTREGMPNIEVHIFDFAKDIYGETMTIEWHVRLRSEQKFASVDEL 296

Query: 295 KIYMGEDEKKARKILES 311
              +  D++KA+    +
Sbjct: 297 VAQIKRDKEKAQAYFRN 313


>gi|317969105|ref|ZP_07970495.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. CB0205]
          Length = 314

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 101/303 (33%), Positives = 152/303 (50%), Gaps = 7/303 (2%)

Query: 14  PNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIF 70
           P   KG   VA+G+FDG+H GH  ++    + A    +   V+SF PHPR ++ + + + 
Sbjct: 9   PGQAKGPTAVALGSFDGLHPGHRSVIAAVTERAAQRHLVPTVVSFWPHPREVLFAEARL- 67

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L  PS +  +LE +G   L+   FT + A  S E F+Q+VL E L+   V+ G  FRFG
Sbjct: 68  RLDLPSEKLALLEPLGIEQLVLVPFTRDLAALSPEAFVQQVLHEQLQAGLVVVGANFRFG 127

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R+G    LQ+ G + G     I  L     +  SSS IR AL  G +  A  LLG  +
Sbjct: 128 AGRSGTTTTLQQLGAERGIEV-QIQPLLAEGEEQFSSSRIRRALAAGDLQEATRLLGRPY 186

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
                V+ G  +GR LG+PTAN+Q+     L  EGVYA       +   + V N G  PT
Sbjct: 187 RFGGTVVSGRGLGRQLGWPTANLQVDGRKFLPLEGVYAAWA-WLGEERLAAVMNLGPQPT 245

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + P  P  +E  +   + ++ G+   V     LR + +F+++E L   +  D + A  +L
Sbjct: 246 VDPTAPSAVEVHLLGRTLDLNGRELLVEPVQLLRSQQRFENLEALVQQIQRDAESATALL 305

Query: 310 ESS 312
           ES+
Sbjct: 306 ESA 308


>gi|308068704|ref|YP_003870309.1| riboflavin biosynthesis protein ribC [Paenibacillus polymyxa E681]
 gi|305857983|gb|ADM69771.1| Riboflavin biosynthesis protein ribC [Paenibacillus polymyxa E681]
          Length = 312

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 8/304 (2%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           ++ L       V AIG FDG+HLGH  ++ +A+ +A     P++V++F+PHP+ +++   
Sbjct: 12  DELLQQWGHPQVTAIGQFDGLHLGHASVIRKAVALAREQQVPVSVMTFHPHPKEVMKKGD 71

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+P + ++ IL  MG   L    F  + +  S E F+  VL+  L+++T + G  F
Sbjct: 72  YEGYLTPLADKQTILADMGVDVLYILSFNEDFSKVSPEAFMSDVLLP-LQIRTAVVGFDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG   AG    L+K G +       +          VSSS IR AL  G + +A+  LG
Sbjct: 131 RFGHRGAGHEDTLRKLGGEL-MSVHTVSPF-ELDGDKVSSSRIRRALQNGDLAHASRWLG 188

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
             + I+  V+ GEK GRT+GFPTAN++L    ++  +GVYA+R    D    +GV N G 
Sbjct: 189 RPYRIQGTVMDGEKRGRTIGFPTANLKLDDTYVIPIKGVYAVRALVGD-RWINGVMNVGV 247

Query: 247 NPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT          E  +FDF+Q+IYG    V    Y+RPE KF  +++L   +G D + A
Sbjct: 248 KPTFHEGVLNPSFEVHLFDFNQQIYGDSVLVELHHYIRPERKFSSVDELISQIGNDAQTA 307

Query: 306 RKIL 309
           +K+L
Sbjct: 308 KKLL 311


>gi|15827378|ref|NP_301641.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium leprae TN]
 gi|221229855|ref|YP_002503271.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium leprae Br4923]
 gi|2342621|emb|CAB11394.1| riboflavin kinase [Mycobacterium leprae]
 gi|13092928|emb|CAC31233.1| putative riboflavin kinase [Mycobacterium leprae]
 gi|219932962|emb|CAR70947.1| putative riboflavin kinase [Mycobacterium leprae Br4923]
          Length = 331

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 17/325 (5%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +         +P      V+ IG FDG+H GH  ++   ++   A N P  +++F+PHP 
Sbjct: 8   IVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLMTFDPHPM 67

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   S    L+  + + +++E++G    +   FT +    + ++++ ++LVE L V  
Sbjct: 68  EVVYPGSHPAQLTTLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLVEHLHVVE 127

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHT---VFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ G  F FGK  AG+  +L++ G+++GF       + E R N++   SS+ IR+ +  G
Sbjct: 128 VVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGSMSLLSEHRGNETVAFSSTYIRSCVDAG 187

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            ++ A   LG    +E  V+ G+  G  LGFPTAN+          +GVYA  F      
Sbjct: 188 DMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAWFTVLGHG 247

Query: 237 S----------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT        +E+F+ D   ++YGQ   + F   +R + 
Sbjct: 248 PVTGTVVPGECYQAAVSVGTNPTF-SGRTRTVEAFVLDAVADLYGQHVALDFVGRIRGQR 306

Query: 287 KFKDIEKLKIYMGEDEKKARKILES 311
           KF  +  L   M +D  +AR +L  
Sbjct: 307 KFDSVADLVAEMEKDIDRARALLAD 331


>gi|310641600|ref|YP_003946358.1| riboflavin biosynthesis protein ribf [Paenibacillus polymyxa SC2]
 gi|309246550|gb|ADO56117.1| Riboflavin biosynthesis protein RibF [Paenibacillus polymyxa SC2]
          Length = 312

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 108/304 (35%), Positives = 163/304 (53%), Gaps = 8/304 (2%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSS 67
           ++ L    +  V AIG FDG+HLGH  ++ +A+ +A     P++V++F+PHP+ +++   
Sbjct: 12  DELLQQWGRPQVTAIGQFDGLHLGHASVIRKAVALAREQKVPVSVMTFHPHPKEVMKKGD 71

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L+P + ++ IL  MG   L    F  E +  S E FI  VL+  L++ T + G  F
Sbjct: 72  YEGYLTPLADKQTILSDMGVDVLYILSFNEEFSKVSPEAFITDVLLP-LQILTAVVGFDF 130

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           RFG   AG    L+K G +       +          VSSS IR AL  G + +A+  LG
Sbjct: 131 RFGHRGAGHEDTLRKLGGEL-MSVYTVPPF-ELDGDKVSSSGIRRALQTGDLAHASRWLG 188

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
             + I+  V+ GEK GRT+GFPTAN++L    ++  +GVYA+R    D    +GV N G 
Sbjct: 189 RPYRIQGTVMDGEKRGRTIGFPTANLKLDDSYVIPVKGVYAVRALIGDH-WINGVMNVGV 247

Query: 247 NPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            PT          E  +FDF+Q+IYG+   V    Y+RPE KF  +E+L   +G D + A
Sbjct: 248 KPTFHEGVLNPSFEVHLFDFNQQIYGESVLVELHHYIRPERKFSSVEELISQIGNDAQTA 307

Query: 306 RKIL 309
           +K+L
Sbjct: 308 KKLL 311


>gi|265767430|ref|ZP_06095096.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_16]
 gi|263252735|gb|EEZ24247.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_16]
          Length = 313

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 11/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  NI      P      V  IG FDG+H+GH  ++EQ  ++A        +++F  H
Sbjct: 1   MQIIRNIPGVLPEP-----CVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      L+    +  +LE  G        FT E ++ +A +F+  +L +   V
Sbjct: 56  PRKVMNADYRPELLTTSEEKLALLEGTGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG +R+       + G + G   +       +    +SSS IR  L +G 
Sbjct: 116 QTLVIGYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDD-LHISSSVIRKMLHQGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+       T
Sbjct: 175 VDRAARCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDPDKLVPADGVYAVHVTFDGHT 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+G+ N G  PT+       +E  I  F  +IY +   +SF  YLRPE+KF  IE L  
Sbjct: 235 -YNGMLNIGTRPTIGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIA 293

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D      +L     +
Sbjct: 294 QLHQDAADVEALLGKIQNV 312


>gi|62262314|gb|AAX78060.1| unknown protein [synthetic construct]
          Length = 341

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 114/321 (35%), Positives = 174/321 (54%), Gaps = 10/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  N+   +          +AIG+FDG+HLGH  I+++ + IA  + +   +L F P 
Sbjct: 27  MKIITNLNKTKDF----LPKAIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPL 82

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L  
Sbjct: 83  PKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNT 142

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT   
Sbjct: 143 KHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHD 201

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y
Sbjct: 202 LIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY 260

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ +
Sbjct: 261 -GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQI 318

Query: 299 GEDEKKARKILESSYPLSERD 319
            +D + A+K++ + YP    D
Sbjct: 319 SKDIQTAKKLISTLYPYDVPD 339


>gi|21673083|ref|NP_661148.1| riboflavin biosynthesis protein RibF [Chlorobium tepidum TLS]
 gi|21646154|gb|AAM71490.1| riboflavin biosynthesis protein RibF [Chlorobium tepidum TLS]
          Length = 321

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 10/307 (3%)

Query: 7   IEINQSLPNHL--KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTI 62
           ++    LP  L  +   V IG+FDG+H+GH  I+   I  A    +   V++F PHPR +
Sbjct: 12  LDSVNGLPVQLSPEPSAVTIGSFDGLHVGHRKIVGSMIGHARELGLRSVVVTFEPHPRIV 71

Query: 63  IQSSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           ++     P+  L+    +      M    L   +F  + A+ S+E FI++VLV+ L  + 
Sbjct: 72  LEGGDGCPVRLLTTFDEKISQFSSMPIDLLFVVRFDRQFASKSSEAFIREVLVKMLGARH 131

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G    FGK R+G    L   G + GF    + E+       VSS+ IR  L    + 
Sbjct: 132 VTVGYDHGFGKRRSGSEETLHMLGAECGFGVDVVGEV-IVAGSPVSSTRIRGLLEAARIR 190

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSY 238
           +A   LG  + I   V+ G+K+GRT+GFPT N+ L     ++   GVYA      D   Y
Sbjct: 191 DANECLGAPYAISGTVVEGDKLGRTIGFPTVNLALPDRCKMVPAHGVYAASIEI-DGREY 249

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           S + N GR PT+  +G + +E+ I  FS ++YG+   V   D++R E +F  I++L+  +
Sbjct: 250 SAMMNIGRRPTVSEDGEVRVEAHIIGFSGDLYGRFLIVRMLDFIREERRFASIDELRTQL 309

Query: 299 GEDEKKA 305
             D+K+A
Sbjct: 310 ELDKKEA 316


>gi|260905184|ref|ZP_05913506.1| FMN adenylyltransferase [Brevibacterium linens BL2]
          Length = 312

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 13/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPH 58
           M ++H +     +     G VV +GNFDG+H GH  +L+   A+    +     ++F+PH
Sbjct: 1   MELYHGLN---EVGTDDVGTVVTLGNFDGVHRGHQTVLQAVAALARERSLRSVAMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT+ +   P   ++    +   +   G  AL    + L+ A  SAE+F++   VE L  
Sbjct: 58  PRTVHRPDEPTLMITSTEQKADFIADTGIDALFVQHYDLDFAAQSAEEFVRTYFVEALGC 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G   RFGKD  G    L+  GEKYGF T  I+E+   +    SSS IR  +  G 
Sbjct: 118 EIVVVGDDVRFGKDNEGTIETLRHLGEKYGFRTETIEEV--GRGGRYSSSRIREQIVAGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-T 236
           V  AA  LG    +E  V+HG+  GR LGFPTAN+    + ++  +GVYA      D+  
Sbjct: 176 VAEAADQLGRYHRVEGTVVHGDARGRDLGFPTANLSEDAEGLIPADGVYAGWATFSDEAQ 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFD--FSQ-EIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Y    + G NPT        +E+ + D  F + ++Y +  ++ F   +R ++ F  +++
Sbjct: 236 PYPAAISIGTNPTF-EGSVRRVEAHVLDKEFGEFDVYSRHMSLEFVSRIRGQVTFTGMDE 294

Query: 294 LKIYMGEDEKKARKIL 309
           L + M ED    R++L
Sbjct: 295 LVVKMHEDIADVREVL 310


>gi|114566437|ref|YP_753591.1| riboflavin biosynthesis protein RibF [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337372|gb|ABI68220.1| riboflavin kinase / FMN adenylyltransferase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 319

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   I+   +  N      +A+GNFDG+H GH  ++   +K A   N       F PH
Sbjct: 1   MEVVREID---NFTNSEGSLFLALGNFDGVHRGHQRLIGDLVKKARANNGIAAAFIFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  S     L     + +++ K+G   LI   F L  +  S E+F++ +LVE L++
Sbjct: 58  PAMVLNPSRAPKLLVTAERKAELMNKLGLDKLIYNTFDLAISQCSPEEFVKSILVERLKI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +    G  + FG   +G   +L++ G+KY F    I  +   K Q+VSS+ IR AL  G 
Sbjct: 118 REAFVGFNYSFGHKGSGTPQLLKELGKKYDFQVNIIPPVEI-KGQVVSSTIIRQALDAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +  A  +LGY   IE  VI GEK G T+GFPTAN+ +  ++ +  +GVYA     + +  
Sbjct: 177 MELAREMLGYYPMIEGKVIEGEKRGATIGFPTANLGIGAELNIPVKGVYAALAVLEGEN- 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +    N G  PT     P+ +E+ + DF++++Y Q   + F   +R E +F  +++L   
Sbjct: 236 FGAAVNIGSKPTFHQEYPVSVEAHLIDFNRQVYDQDLRLFFLQKIRDEKRFSSVDELIKQ 295

Query: 298 MGEDEKKARKILES 311
           +G D K+A +I ES
Sbjct: 296 IGLDRKQAGEIYES 309


>gi|319761890|ref|YP_004125827.1| riboflavin biosynthesis protein ribf [Alicycliphilus denitrificans
           BC]
 gi|330826258|ref|YP_004389561.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           K601]
 gi|317116451|gb|ADU98939.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           BC]
 gi|329311630|gb|AEB86045.1| riboflavin biosynthesis protein RibF [Alicycliphilus denitrificans
           K601]
          Length = 348

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 145/353 (41%), Gaps = 37/353 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +F      Q  P       + IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGFHHPQVAPA----CALTIGNFDGVHRGHQAMLALLNNEAEHRGVQSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L + G    +   F    A  S + FI+ V+V
Sbjct: 57  PRDYFAGLHRRPELAPARIGTLRDKLSELARCGVQQTVVLPFNERLACQSPQAFIEDVVV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + ++ G  FRFG  RAGD  +L   G  +GF    ++    +    VSS+ +R A
Sbjct: 117 RGLGARYLLVGDDFRFGSQRAGDYAMLDAAGPAHGFEVARMNSYEVH-GLRVSSTAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILLK 222
           L  G +  AA LLG  + I   V+HG K+GR L           GF T N++ +      
Sbjct: 176 LAAGDMQEAARLLGRPYAISGHVVHGRKLGRQLGRSAASGAHQDGFRTLNLRFAHWKPAA 235

Query: 223 EGVYAIRFRTQDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQR 273
            G++A+           GVAN G  P++ P     G +LLE+   D+   +     YG+ 
Sbjct: 236 SGIFAVLVHGLHDQPLPGVANLGVRPSLDPRDVNGGRVLLETHCLDWPAHLGAEGAYGKI 295

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL-----SERDRI 321
             V     L  E+K+  +  L   + +D + AR    S+        + RDRI
Sbjct: 296 IRVELLHKLHDELKYDSLAALTAGIAKDCEDARAYFASTQHAETRRQTTRDRI 348


>gi|289423069|ref|ZP_06424884.1| riboflavin biosynthesis protein RibF [Peptostreptococcus anaerobius
           653-L]
 gi|289156400|gb|EFD05050.1| riboflavin biosynthesis protein RibF [Peptostreptococcus anaerobius
           653-L]
          Length = 308

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF  ++      N      + IGNFDG+H GH  ++ + +     N     V +F+ H
Sbjct: 1   MIVFSRLDEI----NITDKTCITIGNFDGVHRGHQTLISKTVDYARMNGLKSVVFTFSNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       S +  +     + +I+E MG    +  +F  +  + SAE +++K+L+  L +
Sbjct: 57  PVNYFIPGS-VKNIITIEEKLRIIESMGVDICVNIEFNSDMTSISAEDYVKKILLGKLNM 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  F F K+R G+   L+   +++GF    +  +  N ++ VSS++IR  + +G+
Sbjct: 116 RKLIVGHDFSFAKNREGNPAYLESVKDEFGFELEIVAPILLNGTR-VSSTDIRANIIEGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V + A +L   ++I+  VI G +IG  +G+PTAN+      ++  +GVYA      D   
Sbjct: 175 VTSVAFMLDRLYSIDGVVIKGRQIGSKIGYPTANIDYDRGLVIPADGVYATLVEI-DAKK 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  + G NPT+  +    +E++I DF Q+IYG+   V F + +RP IKF+ IE+L   
Sbjct: 234 YKGATSIGNNPTVNGDKT-TVETYILDFDQDIYGKDIRVEFVELMRPMIKFETIEELTDQ 292

Query: 298 MGEDEKKARK 307
           +  DE+  R 
Sbjct: 293 LKADEEYVRN 302


>gi|53715626|ref|YP_101618.1| putative riboflavin kinase [Bacteroides fragilis YCH46]
 gi|52218491|dbj|BAD51084.1| putative riboflavin kinase [Bacteroides fragilis YCH46]
          Length = 313

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 11/319 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +  NI      P      V  IG FDG+H+GH  ++EQ  ++A        +++F  H
Sbjct: 1   MQIIRNIPGVLPEP-----CVATIGFFDGVHMGHRFLIEQVRELAAARGLRSALITFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      L+    +  +LE  G        FT E ++ +A +F+  +L +   V
Sbjct: 56  PRKVMNADYRPELLTTSEEKLALLEGTGVDYCFMLDFTREVSHLTAHEFMSDILRDRYRV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG +R+       + G + G   +       +    +SSS IR  L +G 
Sbjct: 116 QTLVIGYDHRFGHNRSEGFEDYCRYGSEMGIEVIRARACVCDD-LHISSSVIRKMLHQGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G ++GR +GFPTAN+ +     ++  +GVYA+       T
Sbjct: 175 VDRAARCLGYDYFLDGTVVSGYQVGRKIGFPTANLSVDDSDKLVPADGVYAVHVTFDGHT 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+G+ N G  PT+       +E  I  F  +IY +   +SF  YLRPE+KF  IE L  
Sbjct: 235 -YNGMLNIGTRPTIGNGPERSIEVNILHFHSDIYDKFIRLSFVKYLRPELKFDGIEGLIA 293

Query: 297 YMGEDEKKARKILESSYPL 315
            + +D      +L     +
Sbjct: 294 QLHQDAADVEALLGKIQNV 312


>gi|308389937|gb|ADO32257.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis alpha710]
          Length = 318

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 20  HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAALAG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGTFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKARKI 308
           + A++ 
Sbjct: 313 EAAKRW 318


>gi|210622617|ref|ZP_03293277.1| hypothetical protein CLOHIR_01225 [Clostridium hiranonis DSM 13275]
 gi|210154118|gb|EEA85124.1| hypothetical protein CLOHIR_01225 [Clostridium hiranonis DSM 13275]
          Length = 312

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPH 58
           M V   I+      +     VV IGNFDG+H GH +++E+  A   A      V +F  H
Sbjct: 1   MKVIKAIKDI----DIEFDTVVTIGNFDGVHKGHQVLIEKTAAYAKARGIKSAVFTFLNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P         +  +     +E+++E  G   LI   F       SAEQFI K+L + +  
Sbjct: 57  PINYFVPEK-VKNIFDEKEKERLIESFGIDYLIDIPFDKAMTQISAEQFIVKILKDKIHA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F F +++ G+  +L+  G +YG     +  ++ N    VSS+ IR  +++G 
Sbjct: 116 KKIVVGHDFTFARNKEGNADVLRDMGHEYGIEVEIVQPIKIN-GIRVSSTFIRELISEGR 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           V      LG  + IE ++IHG+  GR +G+PTAN+ L   I+  K G+YA R    D   
Sbjct: 175 VDEIPQYLGTHYVIEGEIIHGKANGRKMGYPTANISLKDQIINPKNGIYASR-VIIDGKK 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     L +E+ I DF+++IYG+R  + F + +R E KF+ +++L+  
Sbjct: 234 YFGATNVGMNPTVN-GKYLSIETNILDFNEDIYGKRVRIEFLEKIRDEKKFESLDELRKQ 292

Query: 298 MGEDEKKARK 307
           +  D    R+
Sbjct: 293 LDLDTGFVRQ 302


>gi|33866137|ref|NP_897696.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 8102]
 gi|33639112|emb|CAE08118.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 8102]
          Length = 309

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 5/298 (1%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           +  +   +A+G+FDG+H GH  ++ QAI  +   P TV+SF PHPR ++   + +  L  
Sbjct: 9   DARRPTALALGSFDGLHAGHRRVIGQAIAGSTAVP-TVVSFWPHPREVLFGEARL-RLDL 66

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           PS + ++L+ +G   L+   FT E A  SAE F+  VL++ L+ + ++ G  FRFG  R+
Sbjct: 67  PSEKLELLQPLGIEQLVLVPFTPELAQLSAEAFVNTVLLDTLQAQRIVVGANFRFGNKRS 126

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L++     G   +  + + +   ++ SSS IR AL  G +  A  LLG  +    
Sbjct: 127 GDADLLRQVAAARGVEVLVTEIVEDGNGRM-SSSRIRAALDIGDLDTAKSLLGRPYRFRG 185

Query: 195 DVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVP 252
            V+ G  +GR LG+PTAN+Q+     L   GVYA            + V N G  PT+ P
Sbjct: 186 RVVRGRGLGRELGWPTANLQVDGRKFLPALGVYAAWAWVDGGDQPLAAVMNMGPQPTVDP 245

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             P  +E  + D + E+ G++ TV     LR + +F  +E+L   +G D  +AR +L 
Sbjct: 246 TSPSAVEVHLLDRTIELEGRQLTVEPVQRLRGQQRFSGLEELSAQIGRDADQARSLLS 303


>gi|332976848|gb|EGK13673.1| riboflavin biosynthesis protein RibF [Desmospora sp. 8437]
          Length = 316

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M   H +     +   +    +AIG FDG+HLGH  ++E+A +IA    +   V++F+PH
Sbjct: 1   METIH-LTYPLHIEREVPPVSLAIGYFDGVHLGHRSVIERARQIAGELGVSPAVMTFHPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++  +S    L+P   +    E++G   +   KF  E A+ + E+FI++VL+  L+V
Sbjct: 60  PREVLGKASVSRYLTPLREKLLRFEELGVQRVYVMKFDRELASRTREEFIEEVLIP-LKV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  F FG+  AG    L +  +   F    +  + ++    VSS+ +R  L +G 
Sbjct: 119 RGVTVGFNFTFGRGAAGKAEDLNRLSDGR-FQVEIVHPIASD-GDFVSSTRLRQTLDEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT-QDQT 236
           V  A  +LG  +++  +V+ G++ GRT+GFPTAN++L  P I+   GVY +R R   D  
Sbjct: 177 VEAAMKILGRPYSLRGEVVQGDQRGRTIGFPTANIRLEEPFIIPATGVYVVRVRREGDSK 236

Query: 237 SYSGVANFGRNPTMVPNGPL-LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              G+ N G  PT     P+  LE  +FD  + +YG R  V F   LR E  F  +  L 
Sbjct: 237 DLFGMMNIGYRPTFRDPDPVKTLEVHLFDLDENLYGDRLEVEFLHRLRGEQPFASVTALT 296

Query: 296 IYMGEDEKKARKIL 309
             +  DE+ +R  L
Sbjct: 297 EQLKSDERNSRAWL 310


>gi|311068190|ref|YP_003973113.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           atrophaeus 1942]
 gi|310868707|gb|ADP32182.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           atrophaeus 1942]
          Length = 318

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 153/318 (48%), Gaps = 10/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL--EQAIKIANNSPITVLSFNPH 58
           M   H    +          V+A+G FDG+HLGH  ++   +AI       + V++F+PH
Sbjct: 1   MKTIHITHPHNLKKEEQAKSVMALGYFDGVHLGHQKVIGTAKAIAEEKGLALAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ + EQF  + +V  L 
Sbjct: 61  PSHVLGREREPKDLITPLEDKISQIEQLGTDVLYVVKFNEAFASLTPEQFADQYIV-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G       E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMASMP--LDLNGQADCTTVEKLTEQDKKISSSFIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  LLG  + I+  +IHG+K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELAGVLLGQPYFIKGIIIHGDKRGRTIGFPTANVGLNNTYIVPPTGVYAVQAEINGNV 237

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y GV N G  PT     P    +E  +FDF QE+YG+   + ++  +R E KF  I +L
Sbjct: 238 -YQGVCNIGYKPTFYEKRPEQPSIEVHLFDFDQEVYGESIKIKWYKRIRSERKFSGIAEL 296

Query: 295 KIYMGEDEKKARKILESS 312
              + +D+++A +     
Sbjct: 297 TEQIEKDKQEAIRFFSKC 314


>gi|33862637|ref|NP_894197.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9313]
 gi|33634553|emb|CAE20539.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9313]
          Length = 310

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P   +    +A+G+FDG+H GH  ++E  +  A   P TV+SF PHPR ++    P   L
Sbjct: 12  PQQARTPTALALGSFDGLHAGHRRVIEAVVNNAPGVP-TVVSFWPHPREVLYGE-PRLRL 69

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             PS +  +L  +G   L+   F    A+ SAE F++++L+  L+ + +  G  FRFG++
Sbjct: 70  DLPSEKACLLAPLGVEQLVLVPFDRALASLSAETFVKQMLIHTLKAERIAVGANFRFGRN 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD   LQ+     G   + +  L + + ++ SSS IR+AL++G +  A  L+G  +  
Sbjct: 130 REGDTTTLQQLAAAAGVEVMVLPILEDTEGRM-SSSRIRSALSEGDLQAATTLMGRPYRF 188

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTM 250
              V+ G  +GR LG+PTAN+Q+     L   GVYA     +D+    + V N G  PT+
Sbjct: 189 RGRVVSGRGLGRKLGWPTANLQVDGRKFLPGLGVYAAWASVKDESKPLAAVMNLGPQPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + D   ++ G    V     LR + +F ++E+L   +G D   AR  L+
Sbjct: 249 DPTSPSAVEVHLLDQQMDLEGCEILVEPIQRLRGQQRFANLEELSTQIGRDADLARSKLK 308

Query: 311 S 311
           +
Sbjct: 309 A 309


>gi|184201245|ref|YP_001855452.1| riboflavin kinase/FMN adenylyltransferase [Kocuria rhizophila
           DC2201]
 gi|183581475|dbj|BAG29946.1| flavokinase/FAD synthetase [Kocuria rhizophila DC2201]
          Length = 341

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 32/339 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  + +++    +        V IGNFDG+H GH  +  + +  A        V++F+PH
Sbjct: 1   MIRWRSLD---EVTPGFGPSAVTIGNFDGVHRGHQEVFTRLLNAARERHARSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  S    +     +   LE+ G  A++   ++LE +  S E+F+   LV+ L  
Sbjct: 58  PALVHRPESHPGLIMGLEDKLDALERTGVDAVLVLPYSLEFSELSPERFVVDYLVDPLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN------------------ 160
             ++ G+  R G+D  GD   +++ G ++GF  V ++++                     
Sbjct: 118 VALVIGSDVRLGRDNTGDLSAIRELGRQHGFEVVVVEDVPGTPSSRGEDGHGDEPGTAGR 177

Query: 161 -KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-D 218
            + +  SS+ +R+ L  G +  AA LLG    +  +V+HG   GR LGFPTAN+      
Sbjct: 178 REDRRCSSTWVRSCLEAGDIAGAARLLGRPHRMRGEVVHGAARGRELGFPTANLAPEATG 237

Query: 219 ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQ 272
            +  +GVYA     QD T +    + G NPT        +E+ + D  +      ++YGQ
Sbjct: 238 FIPADGVYAGWLVDQDGTRWPTAISVGSNPTFEGVT-RQVEAHVIDRPEEAVEDFDLYGQ 296

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              V F + LR  + ++ I+ L   M +D  + R IL +
Sbjct: 297 TVVVEFVERLRGMVAYRGIDALVQQMRDDVNRTRDILRT 335


>gi|326318116|ref|YP_004235788.1| riboflavin biosynthesis protein RibF [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374952|gb|ADX47221.1| riboflavin biosynthesis protein RibF [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 349

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 99/354 (27%), Positives = 145/354 (40%), Gaps = 38/354 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F  +      P       V IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGLH----HPGIAPACAVTIGNFDGVHRGHQAMLALLASEAAHRGVESCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     + + L + G    +   F    A    + FI  VLV
Sbjct: 57  PRDYFASALQRPELAPARIGTLRDKLEELARCGVQQAVVLPFNERLARQPPQAFIDDVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V+ G  FRFG  RAGD  +L   G + GF    ++    +    VSSS +R A
Sbjct: 117 RGLGARYVLVGDDFRFGAQRAGDYAMLDAAGRERGFDVARMNSYEVH-GLRVSSSAVRDA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G +  AA LLG  + I   V+HG K+GR L         GF T N++ +       G
Sbjct: 176 LARGDMEAAAALLGRPYAISGHVVHGRKLGRALGASAEGAGDGFRTLNLRFAHWKPAAGG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+      +    GVAN G  P++ P     G +LLE+    +   +     YG+   
Sbjct: 236 IFAVLVHGLSEAPLPGVANLGVRPSLDPADVNGGRVLLETHCLQWPAHLGAEGAYGKIVR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS--------ERDRI 321
           V     L  E+K+  ++ L   +  D + AR    S+   S         RDRI
Sbjct: 296 VELLHKLHDELKYDSLDALTAGIARDCEDARAYFASTPAASYTETRRQTTRDRI 349


>gi|323144576|ref|ZP_08079165.1| riboflavin biosynthesis protein RibF [Succinatimonas hippei YIT
           12066]
 gi|322415652|gb|EFY06397.1| riboflavin biosynthesis protein RibF [Succinatimonas hippei YIT
           12066]
          Length = 318

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M ++ ++           G  +AIGNFDG H GH  ++    +          V+ F P 
Sbjct: 1   MKLYRHL---SDYKRPESGVALAIGNFDGFHKGHQAVIAAMREKAFKFGLKSAVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P       +    L     + K  ++ G   +    F       S  +F+  +LV+ L V
Sbjct: 58  PLEFFAK-AVPARLYSLRDKLKAFKEAGVDIVFCMPFKKSFCQMSDREFVLDLLVKKLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K++  G+ F FGK        L+   ++ G     I  +       VSS+ IR  +  G 
Sbjct: 117 KSITVGSLFTFGKGGVSGIEELKALAKEAGIEAGAISGV-APSGTRVSSTMIRALIQSGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A + +G  ++I   V+HG  +GRTLGFPTAN+ L+  +    GVYA++ +T     +
Sbjct: 176 FTTAKNEIGRPYSISGKVLHGNALGRTLGFPTANINLNRIVCPLVGVYAVKVKTL-YGMF 234

Query: 239 SGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G+AN G  PT+       LLE  +F+F+ ++YGQ   V F   +R E KF D+  LK  
Sbjct: 235 KGMANVGIRPTVEKGRLKNLLEVNLFNFNADLYGQEIEVFFVKKIRDEKKFDDLNSLKEQ 294

Query: 298 MGEDEKKARKILESS 312
           +  D K A  +LE+S
Sbjct: 295 LHADRKTAMTLLENS 309


>gi|213964537|ref|ZP_03392737.1| riboflavin biosynthesis protein RibF [Corynebacterium amycolatum
           SK46]
 gi|213952730|gb|EEB64112.1| riboflavin biosynthesis protein RibF [Corynebacterium amycolatum
           SK46]
          Length = 331

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 26/334 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +++ ++   + P  L   VV IG FDGIHLGH  ++  A+    A      +++F+P+
Sbjct: 1   MEIWYGLD---NAPEDLGDTVVTIGVFDGIHLGHKRLIAAAVSDARARGVKSLLMTFDPN 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         LS  S + ++ E  G   ++   F    ++  AE F++ V+ + L  
Sbjct: 58  PVALFAPDKVPPALSTVSRRAELAEAEGIDVMLVVPFDKTFSSIPAEDFVRTVVRDKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           + V  G  F +G+  +G    L + G K G     +D L     + ++ VSS+ IR  L 
Sbjct: 118 QAVFVGQNFTYGQKASGTAETLPEHGRKCGVDVTIVDLLDVTAADSTERVSSTRIRGLLA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFR-- 231
            G V  AA  LGY   ++ DVI G+   G  LGFPTAN+  +  + +  +GVYA  F   
Sbjct: 178 DGAVSAAASCLGYFHRVDGDVIPGQGRGGAQLGFPTANIDFAEGLAIPADGVYAAWFTAQ 237

Query: 232 -------------TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
                         +    Y    + G N T   +    +E+++ D   ++YG    V F
Sbjct: 238 PTAARPEPDPKGDIEFGVRYPAAVSVGTNVTF-GDTDRTVEAYVIDRHADLYGTAGQVEF 296

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            D +R   KF  +E+L   M +D      IL  +
Sbjct: 297 VDRIRGMEKFDSVEELIDRMNQDVADTEAILAKA 330


>gi|238854736|ref|ZP_04645066.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 269-3]
 gi|260663968|ref|ZP_05864821.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932873|ref|ZP_06338270.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
 gi|313472260|ref|ZP_07812752.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 1153]
 gi|238832526|gb|EEQ24833.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 269-3]
 gi|239529655|gb|EEQ68656.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 1153]
 gi|260561854|gb|EEX27823.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii
           SJ-7A-US]
 gi|281302908|gb|EFA95113.1| riboflavin biosynthesis protein RibF [Lactobacillus jensenii 208-1]
          Length = 312

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 91/316 (28%), Positives = 164/316 (51%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFN 56
           M + H   ++  +   L     V+A+G FDG+H+GH  ++++A  +      P+ VL+F+
Sbjct: 1   MEIIH---LSYPITKELTHTHVVLALGFFDGVHIGHQKLIKRAQEVAKKKQLPLMVLTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ I    +    L   S + K +EK+G   L    FT   +  S ++F+ +V++  L
Sbjct: 58  RHPKEIYLGRTDFEYLDNLSEKAKKMEKLGVDYLAVAPFTEGFSKLSPQEFVDQVII-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +  TV+ G  + +G     +   L     K  F  V + E + +    + S+ IR A+  
Sbjct: 117 KADTVVAGFDYTYGPKDIANMENLP-YFAKNRFEIVILPE-QTSGGSKIGSTAIRQAIRD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G++  A +LLG  + +   V HG + G  LGFPT N+ L+   ++ K GVYA R      
Sbjct: 175 GNLELATNLLGSHYIMSGIVGHGLRNGHKLGFPTINLILNGRKVIPKIGVYATRTLVHG- 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T+  +  + +ES++FDF+++IY +  ++ ++ Y R EIKF  +++LK
Sbjct: 234 KWYDSMTSVGYNVTIQASKKIYIESYLFDFNEDIYDEEISIEWYHYTRGEIKFASLDELK 293

Query: 296 IYMGEDEKKARKILES 311
             + +DEK+ R   ++
Sbjct: 294 KQLIKDEKEIRNYFDN 309


>gi|220927914|ref|YP_002504823.1| riboflavin biosynthesis protein RibF [Clostridium cellulolyticum
           H10]
 gi|219998242|gb|ACL74843.1| riboflavin biosynthesis protein RibF [Clostridium cellulolyticum
           H10]
          Length = 311

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 5/291 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V +GNFDG+H+GH  ++   I+ +        V +F  H   I++       L   S + 
Sbjct: 19  VGLGNFDGLHIGHMALINTLIRESKLNGLSSVVYTFTRHTENILRKKLITPLLLTESKKI 78

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L +     L   +F    +  S E+F+ K+L   L +K  + G  +RFG    GD  +
Sbjct: 79  ELLSETTLDYLYLDEFNEAFSRMSPEEFVIKILKSKLNIKLAVAGHDYRFGYKGEGDIPL 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G+KYGF  V I  +  +  +I+SS++IR ++  G++  A  LLG  ++I ++V++G
Sbjct: 139 LEQFGKKYGFKVVVIPPITCDN-EIISSTSIRQSIINGNLETAYKLLGRNYSIIAEVVNG 197

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            ++G T+GFPTAN+      +L   GVY  +        Y+ + N G NPT        +
Sbjct: 198 RRVGNTIGFPTANIHPEKYLVLPHNGVYITKTLLNGH-LYNSMTNVGYNPTFEDVQQKTI 256

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E+ I DF Q+IYG++  V F   +R E KF ++E+L I + +D + AR  L
Sbjct: 257 ETHIMDFHQDIYGEKIEVFFLKKIRDEKKFSNVEELIIQITKDMRVARDYL 307


>gi|78185068|ref|YP_377503.1| riboflavin kinase / FAD synthetase [Synechococcus sp. CC9902]
 gi|78169362|gb|ABB26459.1| FMN adenylyltransferase / riboflavin kinase [Synechococcus sp.
           CC9902]
          Length = 320

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 98/302 (32%), Positives = 159/302 (52%), Gaps = 7/302 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFNPHPRTIIQSSSPIFT 71
           +  +   +A+G+FDGIH GH  ++  A+   +    +  +V+SF PHPR ++   + +  
Sbjct: 19  DARRPTALALGSFDGIHAGHRAVIAAALDGLDPEIGAVPSVVSFWPHPREVLFGETRL-R 77

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L  P  +  +L  +G   L+   FT E A  SAE+F   VL+E L+ K +  GT FRFG 
Sbjct: 78  LDLPQEKLSLLGPLGIEQLVLVPFTKELAQLSAEEFADSVLLETLQAKRIAVGTNFRFGH 137

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            RAGD  +LQ+   + G     +D + +   ++ SSS IR+AL +G +  A  LLG  + 
Sbjct: 138 RRAGDAELLQRLARRRGVDVRIVDIVEDADGRM-SSSRIRSALEQGALAQAEALLGRPYR 196

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT-SYSGVANFGRNPT 249
            +  V+ G  +GR +G+PTAN+Q+     L   GVYA   +          V N G  PT
Sbjct: 197 FQGKVVRGRGLGREIGWPTANLQVDGRKFLPGLGVYAAWVQLDGAGDVMPAVMNLGPQPT 256

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + PN P  +E  + D + E+  +   V     LR + KF  +++L   +G+D + AR++L
Sbjct: 257 VDPNSPSAVEVHLLDRNLELDHRELVVEPVHRLRGQKKFNGLQELSAQIGDDAEAARQLL 316

Query: 310 ES 311
           ++
Sbjct: 317 KN 318


>gi|296330882|ref|ZP_06873357.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674400|ref|YP_003866072.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151887|gb|EFG92761.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412644|gb|ADM37763.1| bifunctional riboflavin kinase FAD synthase [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 316

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M   H    +  +       V+A+G FDG+HLGH  ++  A +I       + V++F+PH
Sbjct: 1   MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVIGTAKQIAEEKGLALAVMTFHPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         ++P   +   +E++G   L   KF    A+ S +QF  + ++  L 
Sbjct: 61  PSHVLGRDQEPKDLITPLEDKINQIEQLGTEILYVVKFNEVFASLSPKQFADQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  F +GK   G    +    +  G     + E    + + +SSS IRTAL  G
Sbjct: 120 VQHAVAGFDFTYGKYGKGTMETMP--HDLDGKAECTMVEKLTEQDKKISSSYIRTALQNG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A+ LLG  + I+  VIHG+K GRT+GFPTAN+ L+   I+   GVYA++       
Sbjct: 178 DVELASILLGQPYFIKGIVIHGDKRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEMNG-E 236

Query: 237 SYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            Y+GV N G  PT     P    +E  +FDF QE+YG    + ++  +R E KF  I++L
Sbjct: 237 VYNGVCNIGYKPTFYEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKEL 296

Query: 295 KIYMGEDEKKARKILES 311
              + +D+++A +   +
Sbjct: 297 TEQIEKDKQEAIRYFSN 313


>gi|311087046|gb|ADP67126.1| FMN adenylyltransferase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087606|gb|ADP67685.1| FMN adenylyltransferase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +   I    ++       VV IGNFDGIHLGH  +     +I     ++  V+ F P 
Sbjct: 1   MKIIRGI---HNIKEINSNSVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +
Sbjct: 58  PLEFLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R G+  +L+K G KY F+ + I  L  N    +SS+NIR AL++ +
Sbjct: 118 KFIVIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNN-IKISSTNIRKALSENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +       
Sbjct: 177 IKLASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYA 236

Query: 239 SGVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G++N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  
Sbjct: 237 IGISNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDEQFFPSKKELKNQ 296

Query: 298 MGEDEKKARKIL 309
           + +D    +K  
Sbjct: 297 ISQDILIVQKYF 308


>gi|317050558|ref|YP_004111674.1| riboflavin biosynthesis protein RibF [Desulfurispirillum indicum
           S5]
 gi|316945642|gb|ADU65118.1| riboflavin biosynthesis protein RibF [Desulfurispirillum indicum
           S5]
          Length = 312

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 94/316 (29%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V+ +I+  Q  P   +  V+ IGNFDG+HLGH  + E+ +  A+   SP   LSF+PH
Sbjct: 1   MEVYTSID--QVPPGRYQCPVLTIGNFDGVHLGHRRVFERLLASADETGSPALCLSFDPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     +  L     + +++  +G + LI + F ++ A    ++F+++VL+E L +
Sbjct: 59  PLKVL-GRRDLKLLISREEKIQVIRSLGVNGLILHPFDMDFAALEPQRFVEQVLLEKLGI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  + FG++RAGD    +   ++       ++ +  +   IVSSS IR  +  G 
Sbjct: 118 RKLVVGYDYAFGRNRAGDHHFFRHLRQQGLLDVEIVEPVSVD-GTIVSSSLIRQLVQDGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +   A  LG  + +   V+ G+  G+ +GFPTAN+    +IL   GVYA   R     S+
Sbjct: 177 MSAVARYLGRPYCLSGTVVEGDMRGKKIGFPTANLAYIQEILPPTGVYATVARV-GNKSF 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             + N G NPT V    + +E+ I DFS+ +YG    + F + +R E+KF   + L   +
Sbjct: 236 VALTNIGYNPTFVERRVVSVETHILDFSRNLYGFPLELLFLERIRGEVKFASAQDLIAQI 295

Query: 299 GEDEKKARKILESSYP 314
            +D +  R+ ++S   
Sbjct: 296 HKDIEHTRQRIDSHKH 311


>gi|328950616|ref|YP_004367951.1| riboflavin biosynthesis protein RibF [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450940|gb|AEB11841.1| riboflavin biosynthesis protein RibF [Marinithermus hydrothermalis
           DSM 14884]
          Length = 295

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 96/305 (31%), Positives = 150/305 (49%), Gaps = 15/305 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ 64
           I IN          +VAIG+FDG+HLGH  +L +A++       P+ V +F+P  +  ++
Sbjct: 2   ILINDPYDAPTGPKIVAIGSFDGVHLGHQYLLRRALREAKRRGLPLLVYTFDPPTKVFVK 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
               +  LS  S +  +L ++G    +   F    A  S ++F++ +    LE   +  G
Sbjct: 62  G---VGMLSSMSEKVDLLRELGVEIALVVPFNEAFARRSKDEFLEDL--RALEACAIYVG 116

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+ R+G    LQ               L       V S+ IR  L  G V  A H
Sbjct: 117 EDFGFGRGRSGTPQDLQA------VAPTVTVPLLELGGAPVKSTRIRALLEAGRVEEAKH 170

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  ++    V  G+++GRTLGFPTAN+++    +L  GVYA+R       ++ G+AN 
Sbjct: 171 LLGRPYSARGVVAGGDQLGRTLGFPTANLRVPSFKVLPPGVYAVRVTGP-HGTHGGMANV 229

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+     L LE  +F F+  +YG+   V+F   LR E +F+ +E LK  + +D + 
Sbjct: 230 GTRPTVN-GRALRLEVHLFGFTGNLYGEELEVAFLKKLRSEQRFESLEALKAQLAQDAEA 288

Query: 305 ARKIL 309
           AR+ L
Sbjct: 289 ARRYL 293


>gi|315500472|ref|YP_004089275.1| riboflavin biosynthesis protein ribf [Asticcacaulis excentricus CB
           48]
 gi|315418484|gb|ADU15124.1| riboflavin biosynthesis protein RibF [Asticcacaulis excentricus CB
           48]
          Length = 329

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 7/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII--QSSSP--IFTL 72
           G   AIG+FDG+H GH  ++E AI  A        V+ F+PHP+     ++  P   F L
Sbjct: 33  GACAAIGSFDGVHCGHQRVVENAIAAARRLGAASAVVCFDPHPQAFFLTRAGKPVTPFRL 92

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                Q +   ++G   +   +F    +  +AE F Q +L + L++  +  G  FR+G  
Sbjct: 93  MTLDQQVRAFSELGVEYVFVLRFDETLSALTAEAFTQNILHDHLKLSHISCGFDFRYGAK 152

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    L + G   GF T       +     +SSS +R AL  G    A H+LG     
Sbjct: 153 GVGSAQTLCEAGASMGFTTAVTPCQTDETGHKLSSSAVREALEAGDAQLAGHVLGRPQAF 212

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V  G++IGR +GFPTAN++L   +  K GVY  R R  +      V NFG+ PT+  
Sbjct: 213 AGVVTRGDQIGRQIGFPTANIELGDYLRPKYGVYVTRTRLSNGEVLGSVTNFGKRPTVGG 272

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 E+ IF    +IY Q   V    YLRPE KF   + LK  + +D + A+   
Sbjct: 273 LNERF-ETHIFGLDHDIYDQVIEVELLHYLRPEQKFPSFDALKGQITKDAEAAKAYF 328


>gi|242373564|ref|ZP_04819138.1| FAD synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348927|gb|EES40529.1| FAD synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 323

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 111/320 (34%), Positives = 174/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +   + A   N    V++F+PH
Sbjct: 4   IEVTHPIQKEQLINEDV---AMAFGFFDGMHRGHDKVFQTLDRKAKESNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++ +      I   F+   AN ++E FIQ+ ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAQHDIDYCIVINFSSRFANVTSEAFIQEYVINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+  E   F+T  + + +   S+ +S++ IR ALT+G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESEE---FNTTIVGK-QEMGSEKISTTAIREALTEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLRKANEALGYLYRIKGTVVQGEKRGRTIGFPTANVQPNDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R TV +  +LRPE+KF+ I+ 
Sbjct: 236 KLYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVTVYWHHFLRPEVKFEGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ KA+ +L   +
Sbjct: 296 LVEQMNEDKAKAKYLLSVDF 315


>gi|314933451|ref|ZP_07840816.1| riboflavin biosynthesis protein RibF [Staphylococcus caprae C87]
 gi|313653601|gb|EFS17358.1| riboflavin biosynthesis protein RibF [Staphylococcus caprae C87]
          Length = 323

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ +Q +  ++    +A G FDG+H GH  + +        NN    V++F+PH
Sbjct: 4   IEVTHPIQKDQLINENV---AMAFGFFDGMHRGHDKVFQALNQKAEENNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E+      I   F+   A+ ++E+FIQ+ ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIEQHDVDYCIVINFSSRFASVTSEEFIQEYVINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ   E   F T  + + +   S+ +S++ IR ALT+G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---ESNDFKTTIVGK-QELDSEKISTTAIREALTEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLRKANEELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVIVYWHYFLRPEVKFSGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ +A+ +L   +
Sbjct: 296 LVEQMNEDKARAKYLLSVDF 315


>gi|20807836|ref|NP_623007.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermoanaerobacter tengcongensis MB4]
 gi|254479110|ref|ZP_05092462.1| riboflavin biosynthesis protein RibF [Carboxydibrachium pacificum
           DSM 12653]
 gi|20516398|gb|AAM24611.1| FAD synthase [Thermoanaerobacter tengcongensis MB4]
 gi|214034959|gb|EEB75681.1| riboflavin biosynthesis protein RibF [Carboxydibrachium pacificum
           DSM 12653]
          Length = 316

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 92/305 (30%), Positives = 156/305 (51%), Gaps = 6/305 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ 64
           I    +   +L+  V+A+GNFDG+H+GH  ++E A+           V +F  H   I++
Sbjct: 3   ILDETNFSANLEEKVIALGNFDGVHIGHQKLIEDAVSIARDKKLKSAVFTFKQHTSKILE 62

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  ++  S + ++L+       I + FT E +  S E+FI+ +LV+ L++K  + G
Sbjct: 63  PDKAPELITTLSQKIEVLKSFSLDYGIFFDFTKELSLLSPERFIKDILVDSLKMKVAVVG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             +RFG    GD  +L+K      +    + ++       VSSS IR  + +G++  A  
Sbjct: 123 PNYRFGHKGLGDVEMLKKYSFICSYEVHVVPKVTY-GGITVSSSLIRELIKEGNIEKANV 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVAN 243
           LL   F+IE  ++ G+ +GR LGFPTAN+++  + +L K GVY  R + +    +  V N
Sbjct: 182 LLNRYFSIEGKIVKGKGMGRILGFPTANVEVPEEVVLPKRGVYVTRAKIKGNN-FISVTN 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT      L +E+ I DF   IYG+   + F   +R EIKF+ ++ LK  + +D +
Sbjct: 241 VGFKPTFGE-TRLSVETHILDFEGYIYGEGIEIEFIKRIRDEIKFESLQALKEQVLKDIE 299

Query: 304 KARKI 308
            A+  
Sbjct: 300 YAKSF 304


>gi|302387313|ref|YP_003823135.1| riboflavin biosynthesis protein RibF [Clostridium saccharolyticum
           WM1]
 gi|302197941|gb|ADL05512.1| riboflavin biosynthesis protein RibF [Clostridium saccharolyticum
           WM1]
          Length = 317

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 101/315 (32%), Positives = 167/315 (53%), Gaps = 11/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M         Q      K  +V +G FDG H GH  +L++  +I +       VL+F+  
Sbjct: 1   MEYITGTREFQ----IHKPAIVTLGKFDGRHRGHQKLLKKMREIKDEKGYQTAVLTFDMS 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++   P  T++    ++  LEK+G   LI Y FT ETA+   E+F+++VL   +  
Sbjct: 57  PNALMKGG-PQKTITTNLERKNNLEKIGIDYLIEYPFTEETAHMEPEEFVRQVLAGQMNA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ GT   FG   AG+   L +   +YG+  + I + +++  + +SS+ IR  L  G+
Sbjct: 116 RVIVVGTDCSFGYQGAGNADSLSRWKNRYGYELIVIPKEQDDH-RDISSTYIREQLDAGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           +  A  LLG  + I   V+HG  IG T LGFPTAN+   P+  L   GVY  +    D T
Sbjct: 175 MEKANELLGEPYAIHGTVVHGNHIGGTILGFPTANILPPPEKHLPVFGVYVSKVYV-DGT 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ N GR PT+    P+  E++I+  +++IYG+   V    ++RPE KF+ +E+LK 
Sbjct: 234 YYGGITNIGRKPTVEGISPVGAETYIYGINEDIYGKTIEVQLLHFVRPERKFEGLEQLKA 293

Query: 297 YMGEDEKKARKILES 311
            +G+D +   + L++
Sbjct: 294 QIGKDREYGMRYLKA 308


>gi|294500893|ref|YP_003564593.1| riboflavin biosynthesis protein RibC [Bacillus megaterium QM B1551]
 gi|295706239|ref|YP_003599314.1| riboflavin biosynthesis protein RibC [Bacillus megaterium DSM 319]
 gi|294350830|gb|ADE71159.1| riboflavin biosynthesis protein RibC [Bacillus megaterium QM B1551]
 gi|294803898|gb|ADF40964.1| riboflavin biosynthesis protein RibC [Bacillus megaterium DSM 319]
          Length = 318

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 96/315 (30%), Positives = 155/315 (49%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M        +      ++  V+A+G FDG+HLGH  ++  A ++A+       V++F PH
Sbjct: 1   METIEIRHPHHFQREAVQQSVLALGYFDGVHLGHQQVINSAKQLADEKGIASAVMTFTPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++  +   I  ++P   ++K++E+MG   L    F  + A    ++F+ + ++  L 
Sbjct: 61  PSVVLGRNVQHIDMITPLQEKKKLIEEMGIDFLYIVHFDKQFAALLPQEFVDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ V+ G  + +GK   G   IL        F    ID+L  N  + +SS+ IR  L  G
Sbjct: 120 VQHVVAGFDYTYGKLGKGTMEILPFHSRSK-FTQTTIDKL-TNGEEKISSTLIRENLANG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
            +     LLG  + +   V HGEK GR +GFPTAN+ L  + LL   GVYA+  +     
Sbjct: 178 DMHRVKELLGRYYEVSGTVTHGEKRGRQIGFPTANIALDDEYLLPRIGVYAVELQLHG-K 236

Query: 237 SYSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y+GV N G  PT   N     +E  +  F ++IY Q  TV +   +R E KF  IE+L 
Sbjct: 237 WYAGVCNVGYKPTFHDNLEKPTIEVHLLSFDEQIYDQHVTVKWHRMIRSEKKFSGIEELV 296

Query: 296 IYMGEDEKKARKILE 310
             + +D+++A    E
Sbjct: 297 GQISKDKEEALAYFE 311


>gi|223044233|ref|ZP_03614270.1| riboflavin biosynthesis protein RibF [Staphylococcus capitis SK14]
 gi|222442383|gb|EEE48491.1| riboflavin biosynthesis protein RibF [Staphylococcus capitis SK14]
          Length = 323

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ +Q +  ++    +A G FDG+H GH  + +        NN    V++F+PH
Sbjct: 4   IEVTHPIQKDQLINENV---AMAFGFFDGMHRGHDKVFQALNQKAEENNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E       I   F+   A+ ++E+FIQ+ ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIEHHDVDYCIVINFSSRFASVTSEEFIQEYVINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ   E   F T  + + +   S+ +S++ IR ALT+G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQ---ESNDFKTTIVGK-QELDSEKISTTAIREALTEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLRKANEELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVTVYWHYFLRPEVKFSGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ +A+ +L   +
Sbjct: 296 LVEQMNEDKDQAKYLLSVDF 315


>gi|94496307|ref|ZP_01302884.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. SKA58]
 gi|94424053|gb|EAT09077.1| riboflavin biosynthesis protein RibF [Sphingomonas sp. SKA58]
          Length = 308

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 9/309 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTII 63
            +  +  +P HL+G V+A+GNFDG H GH  ++ +AI  A     P  V +F+PHP  + 
Sbjct: 3   RLSSSAPVPPHLRGSVMALGNFDGFHAGHQAVVGRAIARAKAEGRPAIVATFDPHPMRLF 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +  +P F L+    QE +  + G  A++ + FT   A      +++ VL+E + V  V+T
Sbjct: 63  RPDTPSFRLTTLDQQEALFARAGADAMMVFDFTPALAALEPADYVR-VLIEDMGVAAVVT 121

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  F FG+ R+G            G     +  + + +  I+SS+ +R AL  G    A 
Sbjct: 122 GEDFTFGRARSGTVD----SFAALGLSAQAVGPVSDAQG-IISSTRVREALRAGDCETAC 176

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   F I   V HG+K+GRT+GFPTAN+ + P +    G+YA+R    D    +G AN
Sbjct: 177 RLLTRPFAIRGVVQHGDKLGRTIGFPTANIDMGPYLRPAYGIYAVRGILPDGRVLNGAAN 236

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  P+  P    LLE   FDF++ +Y Q   V    YL  E K+  ++ L   + +D  
Sbjct: 237 LGIRPSFDPPKE-LLEPHFFDFAESLYAQEVEVQLIRYLHGERKYDGLDALTAGIAQDCA 295

Query: 304 KARKILESS 312
            AR+IL  +
Sbjct: 296 DARQILAGT 304


>gi|160880901|ref|YP_001559869.1| riboflavin biosynthesis protein RibF [Clostridium phytofermentans
           ISDg]
 gi|160429567|gb|ABX43130.1| riboflavin biosynthesis protein RibF [Clostridium phytofermentans
           ISDg]
          Length = 317

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHP 59
           M   +     +          V +G FDG+H GH L+L +  K       +V+ +F+ HP
Sbjct: 1   MEYIYGSTDFK-----YHNTCVTLGKFDGLHRGHQLLLSELAKFEQQGLTSVMFTFDYHP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +  S   I  +     ++++L ++G   LI Y FT ETA+   E FI++VL+  L+ K
Sbjct: 56  GNLF-SEKEIDLIYTEEEKKELLSRLGPKVLISYPFTEETASMEPEDFIKEVLIGKLDAK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  +RFG+ R GD  +L+K    YG+  V  ++L  + +  +SS+ IR  L  G +
Sbjct: 115 AIVIGADYRFGRKRKGDAALLKKYSIMYGYELVICEKLTYHDNV-ISSTRIREELKNGQM 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSY 238
            +   +LG+ +TI   V+ G KIGRT+G PT N+  +   +L   GVYA   + Q+ T Y
Sbjct: 174 ESVNEMLGHPYTIMGTVVTGNKIGRTIGVPTVNLLPAEHKLLPPNGVYASIIKFQENTYY 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G  PT+     L +E+ IF F+ ++YG+   V  + Y RPE KF  IE+LK  +
Sbjct: 234 -GVTNIGYKPTVGAGQKLGVETHIFGFTGDLYGKIIEVELYRYERPETKFTSIEELKQRV 292

Query: 299 GEDEKKARKILE 310
             D +  ++   
Sbjct: 293 QLDIQNVKEFFA 304


>gi|219682081|ref|YP_002468465.1| FMN adenylyltransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219621814|gb|ACL29970.1| FMN adenylyltransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086465|gb|ADP66546.1| FMN adenylyltransferase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +   I    ++       VV IGNFDGIHLGH  +     +I     ++  V+ F P 
Sbjct: 1   MKIIRGI---HNIKEINSNSVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +
Sbjct: 58  PLEFLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R G+  +L+K G KY F+ + I  L  N    +SS+NIR AL++ +
Sbjct: 118 KFIVIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNN-IKISSTNIRKALSENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +       
Sbjct: 177 IKLASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYA 236

Query: 239 SGVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G++N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  
Sbjct: 237 IGISNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDERFFPSKKELKNQ 296

Query: 298 MGEDEKKARKIL 309
           + +D    +K  
Sbjct: 297 ISQDILIVQKYF 308


>gi|2500204|sp|Q59263|RIBF_CORAM RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|296863357|pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From
           Corynebacterium Ammoniagenes
 gi|296863358|pdb|2X0K|B Chain B, Crystal Structure Of Modular Fad Synthetase From
           Corynebacterium Ammoniagenes
 gi|840671|dbj|BAA07182.1| FAD synthetase [Corynebacterium ammoniagenes]
          Length = 338

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 21/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +++      ++P  L    V IG FDG+H GH  ++   ++ A    +   +++F+PH
Sbjct: 1   MDIWYG---TAAVPKDLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++         ++  + +  + E  G   ++   FT E +  S E++++ +L + L  
Sbjct: 58  PVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG++ AG    L++  +     TV + +L +++   +SS+ +R  L++G 
Sbjct: 118 SHVVVGANFTFGENAAGTADSLRQICQSR--LTVDVIDLLDDEGVRISSTTVREFLSEGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  A   LG  F +   V+ G   G   LGFPTAN      + L  +GVYA         
Sbjct: 176 VARANWALGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTE 235

Query: 237 -----------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
                      +Y+   + G NPT   +    +ESF+ D   ++YG    V F D++R  
Sbjct: 236 APVSGNMEPEVAYAAAISVGTNPTF-GDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAM 294

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESS 312
            KF  +E+L   M +D +K R +L   
Sbjct: 295 EKFDSVEQLLEVMAKDVQKTRTLLAQD 321


>gi|288556938|ref|YP_003428873.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pseudofirmus OF4]
 gi|288548098|gb|ADC51981.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           pseudofirmus OF4]
          Length = 315

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 161/315 (51%), Gaps = 12/315 (3%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPR 60
           + H IE N       +  V+A+G FDG+H+GH  ++E A + A    +   V++F+PHP+
Sbjct: 6   LHHPIEANTL---KKRPIVLALGYFDGVHIGHKKVIETACRQAAKLGVEAAVMTFHPHPK 62

Query: 61  TIIQSSSPI-FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            +++  +     L+P  ++EK + ++G   L    FT E A+ + +QF+   ++  L+  
Sbjct: 63  EVLRKEAHPMPYLTPLPLKEKKIAELGVDTLYVVNFTKEFASLTPQQFVDDYIIS-LDAV 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F +G    G    L     +  F    + ++       +SS+ IR  + +G V
Sbjct: 122 HVVAGFDFTYGSLGKGTMETLV-FHSRNKFDQTTVSKVEQGD-IKISSTKIRELIEEGSV 179

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSY 238
                 LG  + +   V+ G+K GRT+GFPTAN+  +    + K GVYA+RF+ +    Y
Sbjct: 180 EKIPAYLGEPYYVLGKVVDGDKRGRTIGFPTANVAAIDRMKIPKTGVYAVRFQVKGN-WY 238

Query: 239 SGVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +GV N G  PT         +E  IFDF+QEIYG++  V F   +R E KF +I +L   
Sbjct: 239 NGVCNIGYKPTFNQEKKEPTIEVNIFDFNQEIYGEQAVVVFERRIRAEKKFNEINELISQ 298

Query: 298 MGEDEKKARKILESS 312
           + +D+++A +     
Sbjct: 299 INKDKEEAIEYFAEK 313


>gi|255535431|ref|YP_003095802.1| FMN adenylyltransferase [Flavobacteriaceae bacterium 3519-10]
 gi|255341627|gb|ACU07740.1| Riboflavin kinase [Flavobacteriaceae bacterium 3519-10]
          Length = 306

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 171/312 (54%), Gaps = 12/312 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M +  N+ E +   P       ++IG FDG+H GH  I      I           +F P
Sbjct: 1   MKIITNLCEYSSKTPL-----ALSIGMFDGVHRGHQSIFSNLKSIAAQKGLKTAAFTFWP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR +   +  +  L+    +  ++ K G  +L   +F  +  N S E+F++++LVE L 
Sbjct: 56  HPRKVFNPADDLKLLNTIDEKTYLISKNGVESLFLKEFDEDFRNLSGEEFVRQILVEKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK +I G    FGK+++GD  +L+K   +  F    ++ + +   + +SS+ IR AL +G
Sbjct: 116 VKYLIIGYDHTFGKNKSGDFSLLKKLSSELNFEVEQVEAV-DFHDKHISSTQIRNALAEG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            V  A  +LGY +++   V+HG+KIGRT+G+PTAN+++    +L K+G Y +    ++ +
Sbjct: 175 DVKEANDMLGYVYSVAGKVVHGKKIGRTIGYPTANLEVDAIKLLPKKGAYIVDVFVKN-S 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ + G NPT+     + +E +I  FS++IYG+  +V+F ++L  EIKF+++EKL  
Sbjct: 234 RYKGMLSIGTNPTVNGET-ITVEVYILGFSEDIYGEDISVNFREFLHEEIKFENLEKLIE 292

Query: 297 YMGEDEKKARKI 308
            + ED++     
Sbjct: 293 RLDEDKRLTENF 304


>gi|329960348|ref|ZP_08298773.1| riboflavin biosynthesis protein RibF [Bacteroides fluxus YIT 12057]
 gi|328532786|gb|EGF59568.1| riboflavin biosynthesis protein RibF [Bacteroides fluxus YIT 12057]
          Length = 313

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 94/298 (31%), Positives = 152/298 (51%), Gaps = 6/298 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+  V  IG FDG+H GH  ++ Q   +  A     +V++F  HPR ++Q       L+ 
Sbjct: 17  LRPSVATIGFFDGVHRGHRYLIGQVAEVAAARGMASSVITFPVHPRKVMQPGYHPDLLTT 76

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L   G    +   FT E A  SA+QF+  +L E   ++ ++ G   RFG +R+
Sbjct: 77  CDEKVSLLAGTGMDYCMMLDFTPELARLSAQQFMA-ILKERYRIEVLVVGYDHRFGHNRS 135

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  + G + G   +       N+ + VSSS IR  L +G V  AA  LGY F ++ 
Sbjct: 136 EGFDDYVRYGGELGIEVMSARAYSYNEDRTVSSSMIRHCLREGQVSEAAEYLGYDFFLDG 195

Query: 195 DVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+ G ++GR +GFPTAN+++     ++  +GVYA+ +   D   Y G+ + G  PT+  
Sbjct: 196 TVVGGYRVGRKIGFPTANLRVNDPDKMIPADGVYAV-YVYLDGIRYGGMLSIGYRPTLAN 254

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                +E  IF F  +IYG+   +SF  Y+RPE+KF  +E+L   +  DE++ +  L 
Sbjct: 255 GTDRSIEVNIFHFKADIYGRPMRISFVRYMRPELKFNTVEELVARIRRDEEEVKAALS 312


>gi|164688514|ref|ZP_02212542.1| hypothetical protein CLOBAR_02159 [Clostridium bartlettii DSM
           16795]
 gi|164602927|gb|EDQ96392.1| hypothetical protein CLOBAR_02159 [Clostridium bartlettii DSM
           16795]
          Length = 309

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 11/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M V  ++E  + +        V IG FDG+H GH  ++E+ +     NN    V +F+ H
Sbjct: 1   MIVITSLEELEQIN----KSAVTIGKFDGLHKGHKALIEKTVDYAKKNNMKSVVFTFSNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    +S      ++    +   ++ +G   +I   F       SA  F++K+LV+ L  
Sbjct: 57  PANFFESEKVRKIITN-KDKINTMKDLGVDIVINLPFDEFMTKISAIDFVEKILVKKLNA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F F +++ GD  +L+  G +Y F    +  ++ N  + VSS+ IR  L +G 
Sbjct: 116 KKIYVGHDFTFARNKEGDAILLKALGGEYDFDVDIVKPIKINNIR-VSSTYIRNLLAQGK 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V +    LG  + +E  VI G++IGRT+GFPTAN++   + IL + G+YA +    D   
Sbjct: 175 VESVKEYLGSNYIVEGIVIEGKQIGRTMGFPTANLKFKENLILPRIGIYATKVYIGD-KV 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     L +E+ I  F+++IYG+   + F + +R E KF  +++LK  
Sbjct: 234 YIGATNIGFNPTVR-VEKLSIETHILQFNEDIYGKNIKIEFLERIRDEKKFNSLDELKQQ 292

Query: 298 MGEDEKK 304
           +  D KK
Sbjct: 293 LKNDTKK 299


>gi|183981934|ref|YP_001850225.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium marinum M]
 gi|183175260|gb|ACC40370.1| bifunctional fad synthetase/riboflavin biosynthesis protein RibF
           [Mycobacterium marinum M]
          Length = 324

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 20/327 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ +G FDG+H GH  ++  A+K   A   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAGRARGVPTVMMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + +++E++G    +   FT +    + ++FI ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVMPFTTDFMKLTPDRFIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG    L+  GE++GF       + E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGSVDTLRHAGERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G V+ A   LG    +E  V+ G   G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDVMAATEALGRPHRVEGVVVRGYGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                        Y    + G NPT        +E+F+ D + ++YGQ   + F   +R 
Sbjct: 238 HGPVTGAVIPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTAADLYGQHVALDFVARIRG 296

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
           + KF  + +L   +G D ++ R +L +
Sbjct: 297 QKKFASVPELVAEIGADTERTRVLLST 323


>gi|121535266|ref|ZP_01667080.1| riboflavin biosynthesis protein RibF [Thermosinus carboxydivorans
           Nor1]
 gi|121306151|gb|EAX47079.1| riboflavin biosynthesis protein RibF [Thermosinus carboxydivorans
           Nor1]
          Length = 311

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 10/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I     L        +A+G FDG+H+GH  I+ +A+++A        V +F+ H
Sbjct: 1   MKIVTQI---GDLGRIYSKTAIALGTFDGVHIGHQRIIRRAVELARVAGGSSVVFTFSNH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +I+        L     + +++E++G   L+   FT      S  +F+  +LVE L  
Sbjct: 58  PLSIVAPERCPPLLLTQEDKARLIEELGVDLLVSIPFTATFLRLSPYEFV-NLLVEHLSP 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  + FG   AG    L++ G K GF    I++      ++VSS+ IR+ +  G 
Sbjct: 117 VHIVVGPNYTFGYKSAGTPETLKEIGAKAGFSV-QIEQAVCIDDKLVSSTYIRSLIAAGK 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A   LG    +  +V+HGE  GR LG+PTAN++ +   +L  +GVY +R    D   
Sbjct: 176 VAEARKFLGRPPLLSGEVVHGEARGRILGYPTANIKTAEGMLLPADGVYVVRLLAGD-IH 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN GRNPT        +E F+F F   +YGQ  TV+F++ LR E+ F + ++LK  
Sbjct: 235 YDGVANVGRNPTFN-GQQRRVEVFLFGFEGSLYGQTVTVTFWERLRGEMVFANADELKRQ 293

Query: 298 MGEDEKKARKI 308
           + +D + AR  
Sbjct: 294 ISQDIQLARTY 304


>gi|318042135|ref|ZP_07974091.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. CB0101]
          Length = 364

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 9/305 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTL 72
              +   +A+G+FDG+H GH  ++   ++ A  + +   V+SF PHPR ++   + +  L
Sbjct: 40  QAARPTAIALGSFDGLHQGHRRVIASVVERAAAAQLVPTVVSFWPHPREVLYGEARL-RL 98

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P+ +  +LE +G   L+   FT E A  S EQF+++VLV+ L+ + V  G  FRFG  
Sbjct: 99  DLPAEKIHLLEPLGIEQLVLVPFTPELAALSPEQFVEQVLVQQLKAQLVAVGENFRFGAG 158

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   L+    + G     +  + ++ +  +SSS IR AL  G +  AAHLL   +  
Sbjct: 159 RSGDIHTLRALCAERGIEL-LVQPILSDSAGRLSSSRIRQALEGGQLQEAAHLLDRPYRF 217

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ----TSYSGVANFGRN 247
              V+ G  +GR LG+PTAN+Q+     L ++GVYA     Q +       + V N G  
Sbjct: 218 GGRVVRGRGLGRELGWPTANLQVDGRKFLPQQGVYAAWVWLQGERLPGERLAAVMNLGPQ 277

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           PT+ P  P  +E  +     E+ G    V     LR + +F+ +E L   +  D   A  
Sbjct: 278 PTVDPTAPSAVEVHLLGRRLELEGAELLVEPVALLRQQQRFESLEALVAQIARDAATAED 337

Query: 308 ILESS 312
           +L S+
Sbjct: 338 LLGSA 342


>gi|119962882|ref|YP_947335.1| riboflavin biosynthesis protein RibF [Arthrobacter aurescens TC1]
 gi|119949741|gb|ABM08652.1| riboflavin biosynthesis protein RibF [Arthrobacter aurescens TC1]
          Length = 327

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 19/323 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTI 62
           H       +P      VV IGNFDG+H GH  +L Q       +N P   ++F+PHP  +
Sbjct: 3   HIWNDPTEVPKDFGPTVVTIGNFDGVHRGHQHVLSQLTDTAKRHNIPSVAVTFDPHPAQV 62

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  S    +     + + L   G  A++  K+TLE A  +  +F+++VL+E L    ++
Sbjct: 63  HRPDSAPELIMGLQDKLEALGDTGVDAVLVMKYTLELAAMTPLEFVREVLLEGLHAAHLV 122

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---------SQIVSSSNIRTA 173
            G   RFG   AGD   +Q+ G++ GF    ++E               +  SS+ +R A
Sbjct: 123 VGHDLRFGAGNAGDVVTMQELGDQLGFGVQVVNEYGAGGFPVHHDGDTDRRCSSTWVREA 182

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT 232
           L++G V+ AA +LG    +  +V+HG   GR LGFPTAN+       +  +G+YA     
Sbjct: 183 LSEGDVVTAAAVLGRPHRMRGEVVHGAARGRDLGFPTANLSHDSTGYVPADGIYAGWLID 242

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEI 286
           Q  T +    + G NPT        +E+ + D  +       +YGQ   V F   LR  +
Sbjct: 243 QAGTRWPAAISVGSNPTFDGVS-RQVEAHVIDRPEENVEDFNLYGQTVAVEFTQRLRGMV 301

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
            ++  E L   M  D  +A ++L
Sbjct: 302 AYRGPEALVEQMCLDVAQAHELL 324


>gi|116669991|ref|YP_830924.1| FMN adenylyltransferase / riboflavin kinase [Arthrobacter sp. FB24]
 gi|116610100|gb|ABK02824.1| FMN adenylyltransferase / riboflavin kinase [Arthrobacter sp. FB24]
          Length = 327

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 150/323 (46%), Gaps = 19/323 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           H       +P      VV  GNFDG+H GH  +L Q I+ A    +    ++F+PHP  +
Sbjct: 3   HIWNDPSEVPADFGPTVVTFGNFDGVHRGHQQVLSQLIRTARLNGARAVAVTFDPHPAQV 62

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  S    +     +   L ++G  A++  K++LE A+ + E+F+  VLV  L+   V+
Sbjct: 63  HRPESAPELIMGLEDKLVALGELGLDAVLVMKYSLELASLTPEEFVAGVLVGSLKASHVV 122

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---------SQIVSSSNIRTA 173
            G   RFG+  +GD   +Q+ GEK+GF    I E  +            +  SS+ +R A
Sbjct: 123 IGHDARFGRGNSGDLSTMQELGEKFGFTVQVISEFGSEGFPIHDDGGKDRRCSSTWVREA 182

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRT 232
           L  G V  A  +LG    +  +V+HG   GR LGFPTAN+   +   +  +G+YA     
Sbjct: 183 LRDGDVATAGAVLGRPHRMRGEVVHGAARGRALGFPTANLASEASGYIPADGIYAGWLVD 242

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEI 286
           Q  T +    + G NPT        +E+ + D  +      ++YGQ   V F   LR  +
Sbjct: 243 QAGTRWPAAISVGSNPTFDGVS-RQVEAHVIDRPEEPVENFDLYGQTVVVEFVARLRGMV 301

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
            ++  E L   M  D  +A  IL
Sbjct: 302 AYRGPEALVEQMRLDVVQAHDIL 324


>gi|15616770|ref|NP_239982.1| FMN adenylyltransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681525|ref|YP_002467910.1| FMN adenylyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471206|ref|ZP_05635205.1| FMN adenylyltransferase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387019|sp|P57250|RIBF_BUCAI RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|25302141|pir||D84947 FMN adenylyltransferase (EC 2.7.7.2) [imported] - Buchnera sp.
           (strain APS)
 gi|10038833|dbj|BAB12868.1| riboflavin kinase / FMN adenylyltransferase [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
 gi|219624368|gb|ACL30523.1| FMN adenylyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 313

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +   I    ++       VV IGNFDGIHLGH  +     +I     ++  V+ F P 
Sbjct: 1   MKIIRGI---HNIKEINSNSVVTIGNFDGIHLGHQKLFSHIYQIGQKYKLSTIVVLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +
Sbjct: 58  PLEFLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R G+  +L+K G KY F+ + I  L  N    +SS+NIR AL++ +
Sbjct: 118 KFIVIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNN-IKISSTNIRKALSENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +       
Sbjct: 177 IKLASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYA 236

Query: 239 SGVANFGRNPTM-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G++N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  
Sbjct: 237 IGISNIGIKPSFSNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDEQFFPSKKELKNQ 296

Query: 298 MGEDEKKARKIL 309
           + +D    +K  
Sbjct: 297 ISQDILIVQKYF 308


>gi|303238105|ref|ZP_07324644.1| riboflavin biosynthesis protein RibF [Prevotella disiens
           FB035-09AN]
 gi|302481700|gb|EFL44756.1| riboflavin biosynthesis protein RibF [Prevotella disiens
           FB035-09AN]
          Length = 315

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V   ++  + L   +   +  IG FDG+HLGH  +L +   +A  S +  TV++F+ H
Sbjct: 1   MKV-RYLKHGEDL--DMNPSIATIGFFDGVHLGHQFLLNKLADMAQQSDLEATVITFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++QS      LS    +   L++     ++   F    A  SA  F++ VL   L V
Sbjct: 58  PRQVLQSDYQPKMLSTLDEKLTKLQQTRVDNVVVIHFDKNFAQLSARIFMETVLKNQLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFG +R+         G++ G   +    L       VSSS +R  + +G 
Sbjct: 118 KKLIMGYDNRFGHNRSETFEDYVAYGQEIGMEVLQNSAL-TLGDVNVSSSVVRRLVERGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQ-DQ 235
           +  A   LG  + I+  V++G + GR LGFPTAN+++     +L   GVYA++   +  +
Sbjct: 177 MEAAQKCLGTPYIIKGKVVNGFQNGRKLGFPTANIEVDSSEKLLPPTGVYAVKVVLENGK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T+Y G+ + G  PT        +E  IFDF  ++YG   +VSF   LR ++KF  IE L 
Sbjct: 237 TTYGGMLDIGTRPTFN-GKNQTIEVNIFDFEGDLYGSMLSVSFVKRLRDDVKFDSIEALI 295

Query: 296 IYMGEDEKKARKILES 311
             + ED+ +   IL +
Sbjct: 296 AQLHEDKTQVISILNA 311


>gi|254880906|ref|ZP_05253616.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254833699|gb|EET14008.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 306

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++   +     +++F  H
Sbjct: 1   MKIISDIN-HQTLP----PSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P+ + ++LE M         FT E + +SA +F+Q +      +
Sbjct: 56  PRQVIQTAYRPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+ +     + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGK-ISSSVIRQLLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +   
Sbjct: 174 VSQAAKFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ N G  PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L  
Sbjct: 233 KWAGMLNIGHRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIA 292

Query: 297 YMGEDEKKARKIL 309
            M +D +K  KIL
Sbjct: 293 QMHKDREKTAKIL 305


>gi|189220158|ref|YP_001940798.1| FAD synthase [Methylacidiphilum infernorum V4]
 gi|189187016|gb|ACD84201.1| FAD synthase [Methylacidiphilum infernorum V4]
          Length = 334

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 2/288 (0%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  ILE+ + +       VLSF+PHP  +I       +L   S ++ +
Sbjct: 44  IAIGVFDGLHLGHQKILERLLSLGTAENCLVLSFDPHPLAVISPEQAPPSLLSLSQKKNL 103

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L   G   ++  +F        AE F+  +   +  ++ V+ G  FRFG +  G+   L+
Sbjct: 104 LHLYGIKHILFVQFDQRLRQLRAELFLITLKKIFPRLRAVVVGEDFRFGLNAEGNVAFLK 163

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +RG      TV +  L     + +SS+ IR A+ + +   A+ LLG  + IE  V  G  
Sbjct: 164 ERGRNLRVQTVVVPPL-IRYGEPISSTRIRKAIVQRNFWLASELLGRSYKIEGYVAAGRG 222

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            G+ +GFPTAN++    +L   GVY  +   ++   + GVAN+GR PT+   G L+LE  
Sbjct: 223 AGKEIGFPTANLEGIAQLLPPPGVYGCQVEYKN-EFFFGVANYGRRPTVQDGGELVLEVH 281

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + +FS ++YG++ ++  F +LR E KF  + +LK  + +D +KA++  
Sbjct: 282 LLNFSGDLYGEKLSLFNFQFLREEKKFLSLPELKSQIEKDIQKAKEFF 329


>gi|294339968|emb|CAZ88331.1| putative bifunctional RibF: riboflavin kinase (Flavokinase); FMN
           adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase) [Thiomonas sp. 3As]
          Length = 323

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 154/328 (46%), Gaps = 12/328 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M+VF  I  ++SL +      + IGNFDG+H GH  +L Q +++A +  +   VL+F PH
Sbjct: 1   MYVFRGIH-HKSLASQ---TALTIGNFDGVHRGHLAMLHQLVQVARSRGLVPTVLTFEPH 56

Query: 59  PRTIIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR           S    +S    +   L + G   ++  +F    A  S E+F+ +++ 
Sbjct: 57  PRDFFATLQGHPDSAPSHISTLRDKLCALREAGVQQVVVLRFDPRIAALSPEEFVVQIVW 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L+ + V+ G  FRFG  RAGD   L       G     +  +    +  +SSS +R A
Sbjct: 117 QGLKAQFVLVGDDFRFGARRAGDFAQLDTLMRNLGGEARQM-PVVTETALRISSSAVRQA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +     LLG  + I   V+HG K+GR LGFPT N++         GV+  R    
Sbjct: 176 LQAGDMETTQVLLGRPYAISGHVLHGAKLGRKLGFPTLNLRFDRARPALGGVFVARVHGL 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +      VA+ G  P +  +G +LLE+ +FD+  E YG+   V     LR E  + D+ +
Sbjct: 236 ELAPLPAVASLGTRPAVETDGRVLLETHVFDWHGEAYGKLIRVELLHKLRDEAHYPDLTQ 295

Query: 294 LKIYMGEDEKKARKILESSYPLSERDRI 321
           L   +  D  +AR         + RDRI
Sbjct: 296 LIAAIQNDSDQARAWFAQLARQTTRDRI 323


>gi|160891486|ref|ZP_02072489.1| hypothetical protein BACUNI_03937 [Bacteroides uniformis ATCC 8492]
 gi|317478408|ref|ZP_07937571.1| riboflavin kinase [Bacteroides sp. 4_1_36]
 gi|156858893|gb|EDO52324.1| hypothetical protein BACUNI_03937 [Bacteroides uniformis ATCC 8492]
 gi|316905444|gb|EFV27235.1| riboflavin kinase [Bacteroides sp. 4_1_36]
          Length = 313

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 11/302 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V  IG FDG+H GH  ++EQ  A+        +V++F  HPR ++Q+      L+  
Sbjct: 13  RPSVATIGFFDGVHRGHRYLIEQVCAVAAGRGLASSVVTFPVHPRKVMQADYHPKLLTTC 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L K G    +   FT E A  SA +F+  +L +  +++ ++ G   RFG +R+ 
Sbjct: 73  DEKVSLLAKTGVDYCMMLDFTPEIARLSAREFM-SILKDRYQIQALVVGYDHRFGHNRSE 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                   G + G   +       +K        VSSS IR  L +G+V  AA  LGY F
Sbjct: 132 GFEDYVHYGRELGMEVLLARAYSYSKETSVTEVTVSSSAIRGLLLEGNVSEAAEYLGYDF 191

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++  V+ G ++GR +GFPTAN+++     ++  +GVYA+R   +    Y G+ + G  P
Sbjct: 192 FLDGTVVGGYQVGRKIGFPTANLRVSDPDKLIPCDGVYAVRVCVEG-KEYGGMLSIGYRP 250

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+       +E  IF F  +IY Q   +SF    RPE+KF  IE+L   +  DE + + I
Sbjct: 251 TLENGPDRSIEVHIFRFDADIYQQPMRLSFVRRTRPELKFDSIEELIAQLHRDEVEIKSI 310

Query: 309 LE 310
           L 
Sbjct: 311 LS 312


>gi|134302193|ref|YP_001122162.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254368675|ref|ZP_04984689.1| hypothetical protein FTAG_01696 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|134049970|gb|ABO47041.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|157121590|gb|EDO65767.1| hypothetical protein FTAG_01696 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 306

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 173/314 (55%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IA  + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|283797344|ref|ZP_06346497.1| riboflavin biosynthesis protein RibF [Clostridium sp. M62/1]
 gi|291075016|gb|EFE12380.1| riboflavin biosynthesis protein RibF [Clostridium sp. M62/1]
 gi|295115416|emb|CBL36263.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SM4/1]
          Length = 313

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHP 59
           M         Q      +   V +G FDG+H GH  +LE+  +         V +F   P
Sbjct: 1   MEYIRGTREFQ----IGEPTAVTLGKFDGLHRGHKKLLEELFRFRGKGYRTAVFTFETAP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            T+I+       ++    + + L   G   L+ Y F  + A+ + E F++KVLVE +  K
Sbjct: 57  GTLIRRKLQ-TMITTNEERCENLRAAGVDYLVEYPFNDQVASMTPEDFVRKVLVEQMNAK 115

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ GT F FG  R+GD   L+    + G+  V +++  +  S+ +SS+ IR  L  G +
Sbjct: 116 AIVAGTDFHFGCRRSGDVEFLRAHARELGYELVVVEKAMD-GSREISSTYIREELAAGQI 174

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSY 238
             A  LLGY ++++  V+HG+ +G  +GFPT N+       L   GVY       D   Y
Sbjct: 175 EKANELLGYTYSVQGRVVHGKHLGTGMGFPTVNLLPPSQKHLPAFGVYYSE-VVIDGKVY 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+ N GR PT+    P  +E++I+D+ ++IYG+   V    +LRPE KF+ +E+LK  +
Sbjct: 234 PGITNIGRKPTIKGEHPAGVETYIYDWKKDIYGKNIEVKLLSFLRPERKFESVEELKRQV 293

Query: 299 GEDEKKARKILES 311
             D+++ R+  E 
Sbjct: 294 LSDKEEGRRWHEE 306


>gi|298242768|ref|ZP_06966575.1| riboflavin biosynthesis protein RibF [Ktedonobacter racemifer DSM
           44963]
 gi|297555822|gb|EFH89686.1| riboflavin biosynthesis protein RibF [Ktedonobacter racemifer DSM
           44963]
          Length = 321

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 18/307 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  VV IGNFDGIH GH  +L++   +A        +++F PH   +++    +  L+  
Sbjct: 11  EPIVVTIGNFDGIHRGHRHLLQRLHSLAEQLHSKPVLVTFTPHVLMVLRPDIYVQYLTTL 70

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + +I  + G     I   FT E A  SAE F+ ++  +  +++ ++ G+ F  G +R 
Sbjct: 71  EEKLQIAHQTGYIQDTIVINFTPEVAALSAEDFMDQLC-QRFQIRGMVVGSNFSLGHNRT 129

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   LQ  G+++G     +  L     + +SS+ IRT +++G V  A  LLG+   +  
Sbjct: 130 GNVAFLQAYGQRHGIEVQSVA-LEEAGQERISSTRIRTLVSEGQVEEANRLLGHPVQVGG 188

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT-----------SYSGVA 242
            V+HG++ GR LGFPTAN++  P  +L   GVYA R     Q             Y+GV 
Sbjct: 189 IVVHGDQRGRVLGFPTANVRPDPHKLLPANGVYAARVFISKQEGPESDGQAISPVYNGVV 248

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G  PT       L+E+ + D   ++Y     + F   LR E +F  IE LK  +  D 
Sbjct: 249 NIGIRPTFN-GKERLVEAHLLDAKLDLYDAYIVIEFIARLRGEQRFPGIEALKAQIEADS 307

Query: 303 KKARKIL 309
           ++AR IL
Sbjct: 308 QQARHIL 314


>gi|270295414|ref|ZP_06201615.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D20]
 gi|270274661|gb|EFA20522.1| riboflavin biosynthesis protein RibF [Bacteroides sp. D20]
          Length = 313

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 11/302 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V  IG FDG+H GH  ++EQ  A+        +V++F  HPR ++Q+      L+  
Sbjct: 13  RPSVATIGFFDGVHRGHRYLIEQVCAVAAGRGLASSVVTFPVHPRKVMQADYHPKLLTTC 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L K G    +   FT E A  SA +F+  +L +  +++ ++ G   RFG +R+ 
Sbjct: 73  DEKVSLLAKTGVDYCMMLDFTPEIARLSAREFM-SILKDRYQIQALVVGYDHRFGHNRSE 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKS-----QIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                   G + G   +       +K        VSSS IR  L +G+V  AA  LGY F
Sbjct: 132 GFEDYVHYGRELGMEVLLARAYSYSKEASVTEVTVSSSAIRGLLQEGNVSEAAEYLGYDF 191

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            ++  V+ G ++GR +GFPTAN+++S    ++  +GVYA+R   +    Y G+ + G  P
Sbjct: 192 FLDGTVVGGYQVGRKIGFPTANLRVSDSDKLIPCDGVYAVRVCVEG-KEYGGMLSIGYRP 250

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+       +E  IF F  +IY Q   +SF    RPE+KF  IE+L   +  DE + + I
Sbjct: 251 TLENGPDRSIEVHIFRFDADIYQQPMRLSFVRRTRPELKFDSIEELIAQLHRDEVEIKSI 310

Query: 309 LE 310
           L 
Sbjct: 311 LA 312


>gi|313906207|ref|ZP_07839553.1| riboflavin biosynthesis protein RibF [Eubacterium cellulosolvens 6]
 gi|313468937|gb|EFR64293.1| riboflavin biosynthesis protein RibF [Eubacterium cellulosolvens 6]
          Length = 309

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 164/313 (52%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M   H+I   +S     +  V+ +G FDG+H GH  ++ +A  +A  +     V +F   
Sbjct: 1   MEYIHDIMKYES----DRPCVITLGKFDGVHKGHRKLIRKARALAAKAGGRSAVFTFTVS 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     +  ++    +++IL ++G   L+   FT E  + SAE F++++LV  L  
Sbjct: 57  P-QVMMGERQMKMITTNRERDEILRELGIDLLVECPFTEELRSMSAEDFVKELLVGRLHA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ GT  RFGKDRAGD  +L   G KYGF   F++E   +  + +SSS +R  + +G 
Sbjct: 116 SAVVVGTDARFGKDRAGDADLLVSLGAKYGFDV-FVEEKEKDGDREISSSYVRERIAEGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
           +    +LL Y + +  +V+HG  +G TLGFPT N +  S  +L   GVY  R        
Sbjct: 175 MQRVQNLLSYPYFMAGEVVHGRHLGHTLGFPTINTVPPSEKMLPPRGVYFTRTLVGG-KW 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + LE+++FD S ++YGQ   V F  + R E KF  IE+LK  
Sbjct: 234 YQGISNLGVKPTV-DGSAVGLETYLFDCSLDLYGQEARVEFLQFRRSEKKFGSIEELKNQ 292

Query: 298 MGEDEKKARKILE 310
           M ED + A    +
Sbjct: 293 MDEDIQAADNFFQ 305


>gi|311085892|gb|ADP65974.1| FMN adenylyltransferase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 313

 Score =  300 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 7/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +   I    ++       VV IGNFDGIHLGH  +     +I     ++  V+ F P 
Sbjct: 1   MKIIRGI---HNIKEINSNSVVTIGNFDGIHLGHQKLFSHICQIGQKYKLSTIVVLFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++ ++    ++    + + +    F +++  KF     + SA+ FI  +L+  L +
Sbjct: 58  PLEFLRKNNAPVRITKFREKIRRISSYNFDSILCVKFNKSFQSLSAKDFIINILINKLHL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  R G+  +L+K G KY F+ + I  L  N    +SS+NIR AL++ +
Sbjct: 118 KFIVIGNDFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNN-IKISSTNIRKALSENN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  F+I   VIHG KIGRT+ +PTAN+ LS + LL  GVYA++ +       
Sbjct: 177 IKLASLLLGRVFSISGRVIHGNKIGRTMNYPTANILLSKNFLLTNGVYAVKIKYCPNKYA 236

Query: 239 SGVANFGRNPT-MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G++N G  P+        LLE ++FD   ++YG+   +  +  +R E  F   ++LK  
Sbjct: 237 IGISNIGIKPSFFNTQKNKLLEVYLFDIKIDLYGKYIEIFIYKKIRDERFFPSKKELKNQ 296

Query: 298 MGEDEKKARKIL 309
           + +D    +K  
Sbjct: 297 ISQDILIVQKYF 308


>gi|325957043|ref|YP_004292455.1| riboflavin kinase [Lactobacillus acidophilus 30SC]
 gi|325333608|gb|ADZ07516.1| riboflavin kinase [Lactobacillus acidophilus 30SC]
 gi|327183766|gb|AEA32213.1| riboflavin kinase [Lactobacillus amylovorus GRL 1118]
          Length = 309

 Score =  300 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 79/316 (25%), Positives = 156/316 (49%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M + H   +   +  ++     V+A+G FDG+HLGH  ++++A +I    N P+ V++F+
Sbjct: 1   MKIVH---LTYPVKENILSSKVVLALGFFDGVHLGHQKLIKRAKEIADQKNLPLVVMTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ + +       L     +   + ++G   L    FT E +   A+ F+  V+V  L
Sbjct: 58  RHPKEVYEDKKNFKYLETLEEKADKMSELGVDYLAVMPFTKEFSQIGAQDFVDNVIV-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              T++ G  + +G     +   L    +  G   + +   +    + + S+ IR A+  
Sbjct: 117 NADTIVAGFDYTYGPKEIANMDRLPDYAK--GRFDIVVMPKQIFAGKKIGSTEIRQAIKD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQ 235
           G +  A  L+G+ + +   + HG++ G  LGFPTAN+      ++ K GVYA +    D 
Sbjct: 175 GDMELAYELMGHHYVMSGIIGHGKRNGHKLGFPTANLIWADHKVIPKIGVYATKTEI-DG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T+     + +ES +F+F +++YG+   + ++ Y R EIKF ++++LK
Sbjct: 234 KWYDSMTSVGYNVTIGQEKKIYIESNLFNFDEDVYGKPMKIKWYKYTRGEIKFANLDELK 293

Query: 296 IYMGEDEKKARKILES 311
             + +D+++ +     
Sbjct: 294 KQLEKDQEEIKAYFAE 309


>gi|116629474|ref|YP_814646.1| FAD synthase [Lactobacillus gasseri ATCC 33323]
 gi|311110881|ref|ZP_07712278.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri MV-22]
 gi|116095056|gb|ABJ60208.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus gasseri
           ATCC 33323]
 gi|311066035|gb|EFQ46375.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri MV-22]
          Length = 312

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 87/312 (27%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   +  ++ +G FDG+H+GH  +++  + I      P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITKQKVILTLGFFDGVHIGHQKLIKDAKLIAKEKKLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT + +    + F+ +V++  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETAREKEQKMEKLGVDYLVIIKFTKKFSQLKPQDFVDQVIM-KLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L K     G   + ++  ++     V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGPKDIANVENLPKF--AQGRFQIMVEPKQSIDKIKVGSTYIRKAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAAALLGQPYETSGIIVHGFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKING-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IF+F +E YG+  T+S++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGKPLTLSWYKFIRSNKKFSGIEELSRQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRNIKQYF 307


>gi|222111904|ref|YP_002554168.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Acidovorax
           ebreus TPSY]
 gi|221731348|gb|ACM34168.1| riboflavin biosynthesis protein RibF [Acidovorax ebreus TPSY]
          Length = 347

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 146/352 (41%), Gaps = 36/352 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +F       + P+      + IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGF----NHPDVASACALTIGNFDGVHRGHQAMLALLNSEAQHRGVQSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L + G    I   F  + A  + + FI  V+V
Sbjct: 57  PRDYFAGVHKRPDLAPARIGTLRDKLSELARCGVQQTIVLPFNEKLARQAPQAFIDDVVV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + ++ G  FRFG  RAGD  +L   G + GF    ++    +    VSSS +R A
Sbjct: 117 GGLGARYLLVGDDFRFGAQRAGDYAMLDTAGRERGFEVARMNSYEVH-GLRVSSSAVRDA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILLK 222
           L  G +  A  LLG  + I   V+HG K+GR+L           GF T N++ +      
Sbjct: 176 LGAGDMEEATRLLGRPYAISGHVVHGRKLGRSLGRSAASGPHQDGFRTLNLRFAHWKPAA 235

Query: 223 EGVYAIRFRTQDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQR 273
            G++A+     D     GVAN G  P++ P     G +LLE+    +   +     YG+ 
Sbjct: 236 SGIFAVLVHGLDAEPLPGVANLGVRPSLDPSDVNGGRVLLETHCLQWPAHLGAEGAYGKI 295

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP----LSERDRI 321
             V     L  E+K+  +  L   + +D   AR    SS+      + RDRI
Sbjct: 296 VRVELLHKLHDELKYDSLGALTTGIAKDCDDARAYFASSHAETRRQTTRDRI 347


>gi|212692669|ref|ZP_03300797.1| hypothetical protein BACDOR_02166 [Bacteroides dorei DSM 17855]
 gi|237725050|ref|ZP_04555531.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|212664747|gb|EEB25319.1| hypothetical protein BACDOR_02166 [Bacteroides dorei DSM 17855]
 gi|229436788|gb|EEO46865.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 306

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  H
Sbjct: 1   MEIISDIN-HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P  + ++LE       +   FT E +  SA +F+Q +      +
Sbjct: 56  PRQVIQTTYHPQLLSSPKEKLELLETTQVDYCLLLPFTQELSLLSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+       + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSESFEDYCRYGEELNIYMVRARAYTDGEDK-ISSSVIRQLLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +   
Sbjct: 174 VSQAAQFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ N G  PT+     + +E  I +FS++IY +   + F  YLRPE K+  I++L  
Sbjct: 233 KWAGMLNIGHRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKYLRPEEKYGTIDELIA 292

Query: 297 YMGEDEKKARKIL 309
            M +D +K  KIL
Sbjct: 293 QMHKDREKTAKIL 305


>gi|167763722|ref|ZP_02435849.1| hypothetical protein BACSTE_02100 [Bacteroides stercoris ATCC
           43183]
 gi|167697838|gb|EDS14417.1| hypothetical protein BACSTE_02100 [Bacteroides stercoris ATCC
           43183]
          Length = 306

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +      N+ LPN     V  IG FDG+H GH  ++EQ  K+A    +   V++F  H
Sbjct: 1   MQLCTGTSGNELLPN-----VATIGFFDGVHRGHRFLIEQVCKVAAERGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q       L+    +  +L   G    I   FTL+ A  SA+QF+  +  +   V
Sbjct: 56  PRKVMQPDFRPELLTTCDEKVSLLAGTGIDYCIMLDFTLDLACLSAKQFMAILKQD-YRV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G++ G   +       + +  VSSS IR  L +G+
Sbjct: 115 QVLMIGYDHRFGHNRSEGFEDYVRYGQELGIEVLLAQAYYTD-AMTVSSSAIRRLLLQGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY+F ++  V++G ++GR +GFPTAN+++     ++  +GVYA+ +      
Sbjct: 174 VSEAANCLGYQFFLDGTVVNGYRVGRKIGFPTANLRIGDCEKLVPADGVYAV-YVFLGGE 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF+F  +IY Q   +SF    RPE+KF  I++L  
Sbjct: 233 KHAGMLSIGYRPTLNNGIDRSIEVHIFNFDADIYNQPMRLSFVCRTRPELKFDSIDELIA 292

Query: 297 YMGEDEKKARKILE 310
            + +DE +   IL 
Sbjct: 293 QLHKDEAEITAILS 306


>gi|150003868|ref|YP_001298612.1| putative riboflavin kinase [Bacteroides vulgatus ATCC 8482]
 gi|149932292|gb|ABR38990.1| putative riboflavin kinase [Bacteroides vulgatus ATCC 8482]
          Length = 306

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++   +     +++F  H
Sbjct: 1   MKIISDIN-HQTLP----PSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P+ + ++LE M         FT E + +SA +F+Q +      +
Sbjct: 56  PRQVIQTAYRPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+ +     + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGK-ISSSVIRQLLKEGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +   
Sbjct: 174 VSQAAKFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ N G  PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L  
Sbjct: 233 KWAGMLNIGHRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIA 292

Query: 297 YMGEDEKKARKIL 309
            M +D +K  +IL
Sbjct: 293 QMHKDREKTARIL 305


>gi|289578382|ref|YP_003477009.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter italicus
           Ab9]
 gi|297544658|ref|YP_003676960.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528095|gb|ADD02447.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter italicus
           Ab9]
 gi|296842433|gb|ADH60949.1| riboflavin biosynthesis protein RibF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 316

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 97/291 (33%), Positives = 160/291 (54%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDG+H+GH  +++QAI ++   N    V +F  H   I+    P   ++    +
Sbjct: 17  VIALGNFDGVHIGHQKLIKQAISLSKKNNLTSAVFTFKQHTSKILTPDKPSELITTYQKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL++      I + FT   +  +AE+FI K+LVE L ++  + G  +RFG    G   
Sbjct: 77  VEILKQFNLDYGIFFDFTENFSKLTAEEFIIKILVELLNIRIAVAGYNYRFGYKALGSVD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+K  + Y +    +  +   +  +VSSS IR  +  G +  A  LLG  F+++  VIH
Sbjct: 137 TLKKYSKIYSYKVYVVPPV-IREGVVVSSSYIRELIKSGKIEKANELLGRFFSLQGQVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++IGR LGFPTAN+Q+S D +L K GVY  R + +D   Y  V N G  PT      + 
Sbjct: 196 GQEIGRKLGFPTANLQISEDLVLPKTGVYVTRVKIED-KFYIAVTNVGSKPTF-GGTNIS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +ES++ D+++ +Y +   + F   +R EIKF+++E L+  + +D   A+  
Sbjct: 254 VESYVLDYNENLYDKYLEIEFITRIRDEIKFQNVEALQQQVFKDINYAKNF 304


>gi|148240051|ref|YP_001225438.1| riboflavin biosynthesis protein ribF (riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. WH 7803]
 gi|147848590|emb|CAK24141.1| Riboflavin biosynthesis protein ribF (Riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. WH 7803]
          Length = 308

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/302 (32%), Positives = 147/302 (48%), Gaps = 5/302 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P   +    +A+G+FDG+H GH  ++E           TV+SF PHPR ++    P   L
Sbjct: 7   PQQARTPTALALGSFDGLHAGHRRVIEAITANPAGGHPTVVSFWPHPREVLHGE-PRLRL 65

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  +LE +G   L+   FT + A  SA  F+ +VL+  L+ + +  G  FRFG+ 
Sbjct: 66  DLPDEKLHLLEPLGVEQLVLVPFTKQLAQLSAADFVDQVLLSTLQARHIAVGANFRFGRG 125

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD   L +     G     +  L +   ++ SSS IR AL+ G +  AA LLG  ++ 
Sbjct: 126 REGDTDTLARLASAAGVTVSVVPILEDGDGRM-SSSRIRAALSAGELQQAATLLGRAYSF 184

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTM 250
           +  V+ G  +GR LG+PTAN+Q+     L   GVYA       Q T    V N G  PT+
Sbjct: 185 QGKVVRGRGLGRGLGWPTANLQVDGRKFLPGLGVYAAWAWVDGQGTRLPAVMNLGPQPTI 244

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + D  +E+ G+   V     LR + +F  +E+L   +G D   AR  L 
Sbjct: 245 DPGSPSAVEVHLLDVERELVGRSIQVEPVRRLRGQQRFAGLEELSNQIGRDADAARDTLR 304

Query: 311 SS 312
           + 
Sbjct: 305 AQ 306


>gi|303240811|ref|ZP_07327324.1| riboflavin biosynthesis protein RibF [Acetivibrio cellulolyticus
           CD2]
 gi|302591699|gb|EFL61434.1| riboflavin biosynthesis protein RibF [Acetivibrio cellulolyticus
           CD2]
          Length = 312

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 156/314 (49%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +    NQ +    +   + +GNFDG+H+ H  ++   I  +        + +F  H
Sbjct: 1   MEVIYG--KNQQI-EFTRPTGIGLGNFDGLHVAHMALINTLISESKQGSLESILYTFTKH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  II+       ++  + + ++LE          +F    +  S E F++ +LV+ L++
Sbjct: 58  PENIIRKKLFTPLITSVNKKMRLLEVTQLDYTYFEEFDESFSRMSPEAFVRDILVDKLKM 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  +TG  +RFG    GD   L+  G KY +  V I  ++ +   IVSS+ IR  + KG 
Sbjct: 118 KLAVTGVDYRFGYKGQGDVEYLKVLGRKYNYKVVTIPPIKIDDD-IVSSTLIRKHVKKGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           + +A  LLG  ++I   V  G++IG TLGFPTAN+     +L   +GVY  R    +   
Sbjct: 177 MDSAFKLLGRHYSITGIVEKGKRIGNTLGFPTANIYPEEYLLIPLDGVYVTR-TLLNGRM 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+ + N G NPT      L +E++I D++++IYG+   V F   +R E KF  +++L   
Sbjct: 236 YNSITNIGNNPTFEGQKVLSIETYILDYNEDIYGEGIEVFFLQKIRGEKKFNGVDELVDQ 295

Query: 298 MGEDEKKARKILES 311
           +  D K AR+    
Sbjct: 296 IKRDIKSAREYFSD 309


>gi|124003204|ref|ZP_01688054.1| riboflavin biosynthesis protein RibF [Microscilla marina ATCC
           23134]
 gi|123991302|gb|EAY30733.1| riboflavin biosynthesis protein RibF [Microscilla marina ATCC
           23134]
          Length = 310

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 165/314 (52%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +   +          +  +V  G FDG+H+GH  IL +  +I++ S     +++F PH
Sbjct: 1   MKIHRGLASFTP----GEYTIVTSGTFDGVHVGHQKILARIREISSKSKGETVLITFWPH 56

Query: 59  PRTIIQ-SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR ++   ++ +  LS  + + ++LEK G   L+   FT E +  S + FI++V V+ + 
Sbjct: 57  PRIVLSDGNTDLKLLSTINEKARLLEKHGIDHLVVLPFTKEFSQLSPDAFIKQVYVQGVG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G   RFGK+R G    L++    YGF    I    +    ++SS+ IR AL +G
Sbjct: 117 TQKLVIGYDHRFGKNREGGFDYLKEHASSYGFEIEEISR-HDIDDVVISSTKIRNALLEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
           ++  A   LGY ++IE  V+HG+KIGRT+GFPTAN+ +     ++  +G+YA+       
Sbjct: 176 NIEIANQYLGYAYSIEGKVMHGDKIGRTMGFPTANLNIPETFKLIPADGIYAVEA-ILGD 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               G+   G  PT+       +E  +FDF ++IY +   +     +R + K   +E LK
Sbjct: 235 EQLRGMLYIGNRPTLSGATQRRIEVNLFDFDRDIYEESLNLCLVAKIRGDEKLDSLEALK 294

Query: 296 IYMGEDEKKARKIL 309
           + + +DE+K+R I 
Sbjct: 295 LKLKDDERKSRAIF 308


>gi|302383346|ref|YP_003819169.1| riboflavin biosynthesis protein RibF [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193974|gb|ADL01546.1| riboflavin biosynthesis protein RibF [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 315

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 3/288 (1%)

Query: 24  IGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+H GH  ++  A + A+    P+ V+SF+PHPR   Q  +  F L  P    + 
Sbjct: 23  LGAFDGVHRGHQAVIASARQAADRLQCPLAVVSFDPHPRRWFQPDAAPFRLMTPGQMARA 82

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +G + L    F  E A  +   F ++VL E L +K    G  F +GK R G    L 
Sbjct: 83  LEPLGVARLHLLPFDAEMAAMTDTAFARRVLCEGLGLKHAAVGFDFTYGKGRTGSPDALA 142

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K G   GF     + + +     +SSS +R AL  G +  AA +LG  F IE +V+HGEK
Sbjct: 143 KAGADLGFSVSVTNRIDDIGGLKLSSSAVREALHAGDMARAAAILGRPFAIEGEVVHGEK 202

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
            GRT+G PTAN++L   +    GVYA R R  D     GVAN G  P      P LLE +
Sbjct: 203 RGRTIGVPTANVRLGDYMRPAYGVYATRTRLPDGRVIDGVANLGVRPMFEIVEP-LLEVW 261

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +FDF++E+YGQ         LR E+ F  ++ LK  +  D   AR +L
Sbjct: 262 LFDFAEELYGQVVETELVALLRGEMNFDGLDALKTQIDSDAGMARIVL 309


>gi|118497049|ref|YP_898099.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida U112]
 gi|194324284|ref|ZP_03058058.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida FTE]
 gi|208780506|ref|ZP_03247846.1| riboflavin biosynthesis protein RibF [Francisella novicida FTG]
 gi|118422955|gb|ABK89345.1| riboflavin kinase/FMN adenylyltransferase [Francisella novicida
           U112]
 gi|194321731|gb|EDX19215.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           novicida FTE]
 gi|208743652|gb|EDZ89956.1| riboflavin biosynthesis protein RibF [Francisella novicida FTG]
          Length = 306

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IA  + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+           +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPLRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|238916830|ref|YP_002930347.1| riboflavin kinase [Eubacterium eligens ATCC 27750]
 gi|238872190|gb|ACR71900.1| riboflavin kinase [Eubacterium eligens ATCC 27750]
          Length = 308

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/312 (33%), Positives = 161/312 (51%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M   H  +  Q      K   V +G FDGIH GH  ++E   +     N    + +F+  
Sbjct: 1   MEYIHGTDDFQL----NKESAVTLGKFDGIHTGHQKLIEIVRQKADEENLLAVLFTFDSL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +I       F +S  S + ++ E  G    I Y FT E  N   E FI ++L++ L  
Sbjct: 57  PLSICPQKYQHF-ISTSSERRRLCENFGIDVEIEYPFTEEFMNMEPEDFICRILIDKLHA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ GT +RFGKDRAGD  +L + GE+ GF T+ +++ +    + +SS+ IR  L  GH
Sbjct: 116 KYVVVGTDYRFGKDRAGDAAMLVEAGEELGFTTIIVEKEKYQDKE-ISSTYIREELKVGH 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +     LL   F +   V  G ++GR L FPT N+  +   +L   GVYA +     +  
Sbjct: 175 METVNVLLNRPFNVTGVVSIGNQLGRKLDFPTINIYPTEYKLLPPNGVYATQTTIDGEKF 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G  PT+     + +E+F+FDF +++YG++  V F  ++RPE+KF+D+E LK  
Sbjct: 235 Y-GVTNLGTKPTVSDAPEISVETFLFDFDKDVYGKKVDVEFIHFIRPEMKFEDVEGLKRQ 293

Query: 298 MGEDEKKARKIL 309
           +  D   AR + 
Sbjct: 294 IAADSDFARNMF 305


>gi|295090494|emb|CBK76601.1| riboflavin kinase/FMN adenylyltransferase [Clostridium cf.
           saccharolyticum K10]
          Length = 313

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 157/313 (50%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHP 59
           M         Q      +   V +G FDG+H GH  +LE+  +         V +F   P
Sbjct: 1   MEYIRGTREFQ----IGEPTAVTLGKFDGLHRGHKKLLEELFRFRGKGYRTAVFTFETAP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            T+I+       ++    + + L   G   L+ Y F  + A+ + E F+++VLVE +  K
Sbjct: 57  GTLIRRKLQ-TMITTNEERCENLRAAGVDYLVEYPFNDQVASMTPEDFVRRVLVEQMNAK 115

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ GT F FG  R+GD   L+    + G+  V +++  +  S+ +SS+ IR  L  G +
Sbjct: 116 AIVAGTDFHFGCRRSGDVEFLRAHARELGYELVVVEKAMD-GSREISSTYIREELAAGQI 174

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSY 238
             A  LLGY ++++  V+HG+ +G  +GFPT N+       L   GVY       D   Y
Sbjct: 175 EKANELLGYTYSVQGRVVHGKHLGTGMGFPTVNLLPPSQKHLPAFGVYYSE-VVIDGKVY 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+ N GR PT+    P  +E++I+D+ ++IYG+   V    +LRPE KF+ +E+LK  +
Sbjct: 234 PGITNIGRKPTIKGEHPAGVETYIYDWKKDIYGKNIEVKLLSFLRPERKFESVEELKRQV 293

Query: 299 GEDEKKARKILES 311
             D+++ R+  E 
Sbjct: 294 LSDKEEGRRWHEE 306


>gi|254372409|ref|ZP_04987899.1| riboflavin kinase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373880|ref|ZP_04989362.1| hypothetical protein FTDG_00034 [Francisella novicida GA99-3548]
 gi|151570137|gb|EDN35791.1| riboflavin kinase [Francisella novicida GA99-3549]
 gi|151571600|gb|EDN37254.1| hypothetical protein FTDG_00034 [Francisella novicida GA99-3548]
          Length = 306

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 173/314 (55%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IAN + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIANENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+           +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPLRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|124023637|ref|YP_001017944.1| riboflavin kinase/FAD synthase [Prochlorococcus marinus str. MIT
           9303]
 gi|123963923|gb|ABM78679.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9303]
          Length = 310

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 96/300 (32%), Positives = 155/300 (51%), Gaps = 6/300 (2%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P   +    +A+G+FDG+H GH  ++E  +  A   P TV+SF PHPR ++    P   L
Sbjct: 12  PQQARTPTALALGSFDGLHAGHRRVIEAVVNNAPGVP-TVVSFWPHPREVLYGE-PRLRL 69

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P+ +  +L  +G   L+   F    A+ SAE F++++L+  L+ + +  G  FRFG++
Sbjct: 70  DLPTEKTCLLAPLGVEQLVLVPFDRALASLSAETFVKQMLIHTLKAQRIAVGANFRFGRN 129

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD   LQK     G   + +  L + + ++ SSS IR+AL++G +  A  L+G  +  
Sbjct: 130 REGDTTTLQKLAAAAGVEVMVLPILEDTEGRM-SSSRIRSALSEGDLQAATTLMGRPYRF 188

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTM 250
              V+ G  +GR LG+PTAN+Q+     L   GVYA     +D+    + V N G  PT+
Sbjct: 189 RGRVVSGRGLGRKLGWPTANLQVDGRKFLPGLGVYAAWASVKDESEPLAAVMNLGPQPTV 248

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + D   ++ G    V     LR + +F ++E+L   +G D   AR  L+
Sbjct: 249 DPTSPSAVEVHLLDQQMDLEGCELLVEPLQRLRGQQRFANLEELSTQIGRDADLARSKLK 308


>gi|307244375|ref|ZP_07526488.1| riboflavin biosynthesis protein RibF [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492276|gb|EFM64316.1| riboflavin biosynthesis protein RibF [Peptostreptococcus stomatis
           DSM 17678]
          Length = 323

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M VF++IE             V IGNFDG+H+GH  ++ + +K A        V +F+ H
Sbjct: 1   MIVFNSIEDIVL----DTDTCVTIGNFDGVHMGHQELISKTVKYAKKKRLKSVVFTFSNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    +    +  +     ++ ++EK+G    +   F +     SA  +++K+LV+ L +
Sbjct: 57  PVNFFKPGY-VKNIISQEQKQALIEKLGVDVYVNIPFDITMTQISARDYVKKILVDKLRI 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G  F F + + G+   L   G++Y F    +  +  +  + VSS++IRT ++ G 
Sbjct: 116 KKVIVGHDFSFARKKEGNPEKLIDFGKEYNFEVEIVTPVLLD-GKRVSSTDIRTLISNGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A  LLG  + IE  V+ G +IGRT+GFPTAN+      ++ + G+YA      D   
Sbjct: 175 VAGAKKLLGQYYCIEGIVVEGRQIGRTIGFPTANIDYDKSMVIPRMGIYASLATV-DGNV 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G  N G NPT+     + +E++I DF Q IYG+   V F +++R E+KFK  E L   
Sbjct: 234 YCGATNIGTNPTVH-GKKVTIETYILDFDQMIYGKELKVEFVEHMRDEVKFKSKEDLMNQ 292

Query: 298 MGEDEKKARK 307
           + ED    R+
Sbjct: 293 LKEDVAYVRE 302


>gi|299143059|ref|ZP_07036178.1| riboflavin biosynthesis protein RibF [Prevotella oris C735]
 gi|298575474|gb|EFI47361.1| riboflavin biosynthesis protein RibF [Prevotella oris C735]
          Length = 313

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 144/303 (47%), Gaps = 7/303 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
            N +   V  IG FDG+H GH  +++  I  A       TV++F+ HPR ++ S      
Sbjct: 10  NNAIAPCVATIGFFDGVHRGHQYLIKHVIDKAKACGLASTVITFDRHPRQVLHSDYVPQL 69

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +  +L K G        F   TA  SA  F+++VL + L VK +I G   RFG 
Sbjct: 70  LTTLENKLLLLSKTGIDNAAVLPFDEATARLSAFDFMRQVLHDRLNVKQLIIGYDNRFGH 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R  D     + G + G   +       N    VSSS IR+ L  G +  A   LGY +T
Sbjct: 130 NREEDFEDYVRYGNELGIEVIHNQAYVLN-GVNVSSSVIRSFLQAGEIEMATLCLGYSYT 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNP 248
           +   V+HG   GR +GFPTAN+    S  ++   GVYA++ + ++  T   G+ N G  P
Sbjct: 189 LVGKVVHGFAQGRKMGFPTANIDTTESGQLVPAPGVYAVKVKIENTVTLLHGMMNIGMRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T      L LE  IF+F  ++YG++  V F   +R E KF +   L   + +D  +  + 
Sbjct: 249 TF-DGSKLTLEVNIFNFQGDLYGKQLQVVFIHRIREERKFTNALGLAEQLQKDRLQIEEQ 307

Query: 309 LES 311
            + 
Sbjct: 308 FKK 310


>gi|87308060|ref|ZP_01090202.1| probable riboflavin kinase (FAD synthetase) [Blastopirellula marina
           DSM 3645]
 gi|87289142|gb|EAQ81034.1| probable riboflavin kinase (FAD synthetase) [Blastopirellula marina
           DSM 3645]
          Length = 316

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 90/309 (29%), Positives = 160/309 (51%), Gaps = 8/309 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + H++E    +P  + GG + IGNFDG+HLGH  I+E   + A   + P  V +F+PH
Sbjct: 1   MRLLHDLE---HVPPEVLGGALTIGNFDGVHLGHARIVESIRRQARAVHGPTVVFTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L+    + ++L ++G  A+I Y         SAE F Q+++V+ L+ 
Sbjct: 58  PVRLLRPDQTPPPLTWTRRKAQLLAQLGVDAMIAYPTNRALLELSAEAFFQQIVVDQLQA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTKG 177
           K ++ G  F FG++R G+  +L +   ++      ++ ++     +I+SSS +R A+  G
Sbjct: 118 KAMVEGPNFYFGRNRQGNTALLGQLCRQHQMALEIVEPMQLAGHDEIISSSRVRQAIAGG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            V  A  +L   + +   V HG   G +LGF TAN++    I+   GVYA     Q+ T 
Sbjct: 178 DVEAARRMLTEPYRLRGMVTHGAGRGGSLGFATANLEAIDTIIPAHGVYAGYVVRQELT- 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++   + G NPT    G   +E+ + DF+  +YG+   ++F   LR    F D+++L   
Sbjct: 237 HAAAIHIGPNPTFGE-GQAKVEAHLIDFAGSLYGEPLELAFLARLRDVHTFNDVQQLTSQ 295

Query: 298 MGEDEKKAR 306
           + +D +  +
Sbjct: 296 IHQDVEAVK 304


>gi|238852624|ref|ZP_04643034.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri 202-4]
 gi|238834770|gb|EEQ26997.1| riboflavin biosynthesis protein RibF [Lactobacillus gasseri 202-4]
          Length = 312

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 86/312 (27%), Positives = 161/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   +  ++ +G FDG+H+GH  +++  + I      P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITKQKVILTLGFFDGVHIGHQKLIKDAKLIAKEKKLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT + +    + F+ +V++  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETAREKEQKMEKLGVDYLVIIKFTKKFSQLKPQDFVDQVIM-KLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L K     G   + ++  ++     V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGPKDIANVENLPKF--AQGRFQIMVEPKQSIDKIKVGSTYIREAIQHGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +      
Sbjct: 177 VELAAALLGQPYETSGIIVHGFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKING-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGKPLTLAWYKFIRSNKKFSGIEELSRQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRNIKQYF 307


>gi|149280010|ref|ZP_01886135.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter
           sp. BAL39]
 gi|149229207|gb|EDM34601.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter
           sp. BAL39]
          Length = 311

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 176/314 (56%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  ++N+   + L +     VV IG FDG+H GH  I+++  ++A   N    +L+F PH
Sbjct: 1   MKTYYNLSDFKKLDH----AVVTIGTFDGVHFGHQKIIKRLCELAKASNGESVILTFFPH 56

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR II      +  ++  + +  ILE +G   LI   FT + +N S  ++I+ +LV+ + 
Sbjct: 57  PRMIIDPENQDLKLINTIAEKASILEGLGVDHLIITPFTRDFSNLSPAEYIKNILVDTIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK +I G   RFGKDR G    L++  + +G+    I E ++     VSS+ IR +L  G
Sbjct: 117 VKELIVGYDHRFGKDRKGGMPELEEFSDPFGYSIEVIPE-QDIDDVAVSSTKIRQSLLNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            V  A+H LGY F++   VI G+KIGRT+G+PTAN+ +     ++  +G+YA+    ++ 
Sbjct: 176 AVGQASHYLGYDFSMYGRVIKGDKIGRTIGYPTANIFIEETYKLIPSDGIYAVTVEMEE- 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A  G+ PT+       +E  IFDF +EIYGQ  T+ F ++LR ++KF  +E LK
Sbjct: 235 GIYKGMAYIGQRPTIN-GMTRNIEVNIFDFDKEIYGQYITMHFLEFLRHDVKFSGLEALK 293

Query: 296 IYMGEDEKKARKIL 309
           I + +D++      
Sbjct: 294 IQLKKDKEDTLAYF 307


>gi|78187630|ref|YP_375673.1| riboflavin kinase / FAD synthetase [Chlorobium luteolum DSM 273]
 gi|78167532|gb|ABB24630.1| FMN adenylyltransferase / riboflavin kinase [Chlorobium luteolum
           DSM 273]
          Length = 320

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 89/295 (30%), Positives = 145/295 (49%), Gaps = 8/295 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS--SPIFTLSPP 75
             V +G FDG+H GH  I+ + + IA    +   V++F+PHPR ++      P+  L+  
Sbjct: 27  SAVTVGAFDGVHRGHRKIISRMVSIARQRALRSVVVTFDPHPRRVLGGEVTGPLGLLTTL 86

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L       L   +FT E A  S+E+FI+ VLV  L  K+++ G    FG++R+G
Sbjct: 87  EEKITLLRSADVDLLFVVRFTPEFAMQSSEEFIKNVLVGLLGAKSIVIGYDHGFGRNRSG 146

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L++ G + GF      E+R    +  SS+ IR  L  G +  A   LG  +TI   
Sbjct: 147 SGDDLRRLGLELGFTVDVESEVRIAD-EHFSSTRIRQLLGLGRIEEANAFLGSFYTISGT 205

Query: 196 VIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+ G+  GR LGFPT N+ +     +L + GVY       D  S+  + N G  PT+   
Sbjct: 206 VVEGDGRGRGLGFPTVNIHIPDPHKLLPQSGVYVAESNI-DGLSWMAMMNVGVRPTVEDG 264

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           G   +E+ I  +   +YG+  + +   ++R E KF  +E L+  + +D+K     
Sbjct: 265 GRTSVEAHILGWEGSLYGRELSFNLLHFIRRERKFPTLEALRQQLEKDKKTVELY 319


>gi|154509091|ref|ZP_02044733.1| hypothetical protein ACTODO_01608 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192219|ref|ZP_06609388.1| riboflavin biosynthesis protein RibF [Actinomyces odontolyticus
           F0309]
 gi|153798725|gb|EDN81145.1| hypothetical protein ACTODO_01608 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820335|gb|EFF79328.1| riboflavin biosynthesis protein RibF [Actinomyces odontolyticus
           F0309]
          Length = 329

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M+V++++     +P + +  VV IGNFDG+H GH  ++   I+ A+   +    ++F+PH
Sbjct: 1   MNVWYSL---SDIPGN-EASVVTIGNFDGMHNGHKKVISTCIERAHKLGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +    +  +SP   +   +   G  A +   +     +  A++F+ + LVE    
Sbjct: 57  PIQVHKPEVGLQLISPLRDRLDAMAAAGLDATLVAHYDASVYSLEADEFVYEYLVERCGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG+  AG    L++ G +YGF+ + + ++   + +  SSS +R  L  G 
Sbjct: 117 REVVVGEDFRFGRGNAGTIDTLRELGRRYGFNVITVTDIEAPEGRRWSSSWVRELLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR-----T 232
           V  AA +LG+   I   V HG K GRTLGFPTAN+      ++  +GVYA         T
Sbjct: 177 VSGAARVLGHLHRIRGTVCHGFKRGRTLGFPTANLSEDVEGVIPADGVYAGWVVRAVPGT 236

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDI 291
           Q         + G NP         +E+ +       +YG+R  V+F   +RP + F  +
Sbjct: 237 QSAEFLPAAISVGTNPQFNGV-ERTVEAHVLGRSDLNLYGERIAVTFVSRIRPMLSFDSL 295

Query: 292 EKLKIYMGEDEKKARKIL 309
           ++L   M +D ++   +L
Sbjct: 296 DELLTQMDDDLRQTASVL 313


>gi|317476415|ref|ZP_07935664.1| riboflavin biosynthesis protein RibF [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907441|gb|EFV29146.1| riboflavin biosynthesis protein RibF [Bacteroides eggerthii
           1_2_48FAA]
          Length = 308

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 156/314 (49%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +   I   + LPN     V  IG FDG+H GH  ++EQ  + A       +V++F  H
Sbjct: 1   MQLHTEISGKELLPN-----VATIGFFDGVHRGHRFLIEQVCEAAAVRGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    +  +L   G    I   FT + A  SA+QF+  +  +  +V
Sbjct: 56  PRKVMHPDFHSELLTTCDEKTALLADTGIDYCIMLDFTPDLARLSAKQFMAVLKGD-YQV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+ D     + G++ G   +      NN+   VSSS IR  L +G 
Sbjct: 115 QALVIGYDHRFGHNRSEDFDDYVRYGQELGMEVILAQAYSNNE-MTVSSSAIRHLLLEGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ +  S  ++  +GVYA+      + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDSEKLVPADGVYAV-NVFLGEA 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF F  +IY Q   +SF    RPE+KF  IE+L  
Sbjct: 233 KHTGMLSIGYRPTLNNGLDRSIEVHIFHFDADIYDQPMRISFIRRTRPELKFDSIEELIE 292

Query: 297 YMGEDEKKARKILE 310
            + +DE +   IL 
Sbjct: 293 QLHKDEAEITAILS 306


>gi|300361896|ref|ZP_07058073.1| FAD synthetase [Lactobacillus gasseri JV-V03]
 gi|300354515|gb|EFJ70386.1| FAD synthetase [Lactobacillus gasseri JV-V03]
          Length = 312

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 87/312 (27%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V   ++   S P   +  ++ +G FDG+H+GH  +++  + I      P+ V++F+ H
Sbjct: 1   MKVI-TLDYPISAPITNQKVILTLGFFDGVHIGHQKLIKDAKLIAEEKKLPLMVMTFDKH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ I ++      L     +E+ +EK+G   L+  KFT E +    + F+ +V++  L+ 
Sbjct: 60  PKEIYKNDHKFVYLETAHEKEQKMEKLGVDYLVIIKFTKEFSQLKPQDFVDQVIM-KLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            TV+ G  + +G     +   L K     G   + ++  ++     V S+ IR A+  G+
Sbjct: 119 DTVVVGFDYTYGPKDIANVENLPKF--ARGRFQIVVEPKQSIDKIKVGSTYIRKAIQGGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  AA LLG  +     ++HG + G  +GFPTAN+ +S   +L  EGVYA R +      
Sbjct: 177 VELAAALLGQPYETSGIIVHGFRRGHKIGFPTANLDISDAKVLPAEGVYATRAKING-KW 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + + G N T   N  L +E+ IF+F +E YG+  T++++ ++R   KF  IE+L   
Sbjct: 236 HDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGEPLTLAWYKFIRSNKKFSGIEELSRQ 295

Query: 298 MGEDEKKARKIL 309
           + +D++  ++  
Sbjct: 296 LDQDKRNIKQYF 307


>gi|85717166|ref|ZP_01048124.1| riboflavin kinase / FAD synthetase [Nitrobacter sp. Nb-311A]
 gi|85695999|gb|EAQ33899.1| riboflavin kinase / FAD synthetase [Nitrobacter sp. Nb-311A]
          Length = 303

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 102/283 (36%), Positives = 156/283 (55%), Gaps = 7/283 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +GNFDG+HLGH  ++  A ++  +   P   ++F PHPR     ++P F L+  + + ++
Sbjct: 1   MGNFDGVHLGHRAVIAAAFEMAHSRGKPAFAVTFEPHPRKFFSPNAPQFRLTDETNKLRL 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L   G    +   F    A  +A+ FI   L+E L V  +  G  FRFGK R G   +L 
Sbjct: 61  LAGAGLDGAVVMTFDAARAGTTAQDFIHHDLIERLGVSGIAVGYDFRFGKGRVGSPSLLV 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
               + G        + + + + VSSS +R AL +  + +A  +LG  + +  +VIHGEK
Sbjct: 121 SEAARLGIEVNVQPPV-DIEERPVSSSAVRKALVEARIADATAMLGGPWFVTGEVIHGEK 179

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRF---RTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            GR LG+PTAN++L PD  L+ G+YA+R    + +D   + GVA+FGR PT   NG  LL
Sbjct: 180 RGRGLGYPTANIRLDPDCGLRHGIYAVRVGCGKGKDHRRFDGVASFGRRPTF-DNGAPLL 238

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           E F+FDF  ++YG    V+F  ++R E+KF  I+ L   M +D
Sbjct: 239 EVFLFDFQGDLYGTMLDVAFIGFIRNELKFDGIKTLVRQMDDD 281


>gi|239814276|ref|YP_002943186.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Variovorax
           paradoxus S110]
 gi|239800853|gb|ACS17920.1| riboflavin biosynthesis protein RibF [Variovorax paradoxus S110]
          Length = 345

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 103/350 (29%), Positives = 153/350 (43%), Gaps = 34/350 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M VF         P       + IGNFDG+H GH  +L   Q        P  VL+F PH
Sbjct: 1   MQVFRGFR----HPGVAPACALTIGNFDGVHRGHQAMLALLQTEARHRGLPSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L   G +  +   F    A+ S E FIQ VL+
Sbjct: 57  PRDYFAAVTKKPDLAPARIGTLRDKLTELAACGVAQTVVLPFDGRLASQSPEAFIQNVLI 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFG  RAGD  +L   G+ +GF    ++    +    VSSS +R A
Sbjct: 117 DGLGARYVLVGDDFRFGARRAGDYAMLDAAGDAHGFDVARMNSYEVH-GLRVSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G + +A HLLG  +TI   V+HG K+GR L         GF T N++         G
Sbjct: 176 LAEGRMADAQHLLGRPYTISGHVVHGRKLGRALGASAPGKDDGFRTLNLRFKHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++  N    G +LLE+   ++   +     YG+   
Sbjct: 236 IFAVLVHGLADQPLPGVANLGVRPSLDANDVNAGRVLLETHCLEWPSHLGAEGAYGKIVR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE----RDRI 321
           V     L  E+++  +E L   + +D + AR    S++  +     RDRI
Sbjct: 296 VELLHKLHDELRYTSLEALTAGIAKDGRDARAFFASTHAETHRQTTRDRI 345


>gi|89255847|ref|YP_513209.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314334|ref|YP_763057.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156501827|ref|YP_001427892.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010069|ref|ZP_02275000.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367208|ref|ZP_04983238.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           holarctica 257]
 gi|290954401|ref|ZP_06559022.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312178|ref|ZP_06802983.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143678|emb|CAJ78877.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129233|gb|ABI82420.1| riboflavin kinase [Francisella tularensis subsp. holarctica OSU18]
 gi|134253028|gb|EBA52122.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           holarctica 257]
 gi|156252430|gb|ABU60936.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 306

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 173/314 (55%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IA  + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGNRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|88809113|ref|ZP_01124622.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805]
 gi|88787055|gb|EAR18213.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 7805]
          Length = 312

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/311 (30%), Positives = 149/311 (47%), Gaps = 5/311 (1%)

Query: 5   HNIEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           H   I    P   +    +A+G+FDG+H GH  +++           TV+SF PHPR ++
Sbjct: 2   HGPLIPLCSPQQARTPTALALGSFDGLHAGHRRVIKAITTDPEGGHPTVVSFWPHPREVL 61

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
               P   L  P  +  +L+ +G   L+   FT + +  SA  F+ +VL+  L+ + +  
Sbjct: 62  HGE-PRLRLDLPDEKLHLLDPLGIDQLVLVPFTKQLSQLSAADFVDQVLLTTLQARHIAV 120

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG+ R GD   L +     G     +  L + + ++ SSS IR AL+ G +  AA
Sbjct: 121 GANFRFGRGREGDTTTLARLASAAGVKVSVVPILEDGEGRM-SSSRIRAALSAGELNRAA 179

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-TSYSGV 241
            LLG  +  + +V+ G  +GR LG+PTAN+Q+     L   GVYA         T    V
Sbjct: 180 TLLGRAYHFQGEVVRGRGLGRGLGWPTANLQVDGRKFLPGLGVYAAWAWVDGNGTRLPAV 239

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PT+ P  P  +E  + D  +E+ G+   V     LR + +F  +E+L   +  D
Sbjct: 240 MNLGPQPTVDPGSPSAVEVHLLDVEKELVGRTIRVEPVRRLRGQKRFAGLEELSNQIKRD 299

Query: 302 EKKARKILESS 312
              AR+ L + 
Sbjct: 300 ADAARETLRAQ 310


>gi|168216969|ref|ZP_02642594.1| riboflavin biosynthesis protein RibF [Clostridium perfringens NCTC
           8239]
 gi|182380981|gb|EDT78460.1| riboflavin biosynthesis protein RibF [Clostridium perfringens NCTC
           8239]
          Length = 309

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFNKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|290969154|ref|ZP_06560679.1| riboflavin biosynthesis protein RibF [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780660|gb|EFD93263.1| riboflavin biosynthesis protein RibF [Megasphaera genomosp. type_1
           str. 28L]
          Length = 320

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 11/325 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M VFH+ +            VVA+G FDG+H+GH  ++  A+  A        V++F+ H
Sbjct: 1   MEVFHSFQEITGC----HAAVVALGTFDGVHMGHRAVMRAAMAEAKKLHRKAAVVTFSAH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +++        L+  + + + +  +G   L+    T E    +   F +++  E    
Sbjct: 57  PLSVLHPEKEPLRLATTAQKIQYIADVGVDVLVLLPMTKELMAETPTAFCRQLQ-ETFCP 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTALTKG 177
             ++ G  F +G    G+   L    +K+      +  + + +  + +SS+ IR  +  G
Sbjct: 116 AAIVVGENFTYGAGAGGNTETLAAYMKKHRTPVQVLPLVPDPQGLEPISSTKIRQLIACG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           +V  A  LLG  F +   V  G++ GRT+GFPTAN+ L+P + +  +GVY      Q Q 
Sbjct: 176 NVEEAGRLLGRPFAMTGTVADGDRRGRTIGFPTANLHLAPHMAVPADGVYITEVSRQGQ- 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
               + N G NPT        +E+ I D+ ++IYGQ  TVSF   +R E +F  +  L  
Sbjct: 235 WLPAMTNVGANPTF-TRQYRRVETHILDWHEDIYGQDITVSFLRRIREEKQFPTVAALIT 293

Query: 297 YMGEDEKKARKILESSYPLSERDRI 321
            M +D++  R+   +   L + + +
Sbjct: 294 QMQQDKEVVRQYFLTRQALQDLETV 318


>gi|265754568|ref|ZP_06089620.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_33FAA]
 gi|263234682|gb|EEZ20250.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_33FAA]
          Length = 306

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 165/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  H
Sbjct: 1   MEIISDIN-HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P  + ++LE       +   FT E +  SA +F+Q +      +
Sbjct: 56  PRQVIQTTYHPQLLSSPKEKLELLETTQVDYCLLLPFTQELSMLSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+       + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSESFEDYCRYGEELNIYIVRARAYTDGEDK-ISSSVIRQLLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +   
Sbjct: 174 VSQAAQFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ N G  PT+     + +E  I +FS++IY +   + F  +LRPE K+  I++L  
Sbjct: 233 KWAGMLNIGHRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKHLRPEEKYGTIDELIA 292

Query: 297 YMGEDEKKARKIL 309
            M +D ++  KIL
Sbjct: 293 QMHKDREETAKIL 305


>gi|329956640|ref|ZP_08297213.1| riboflavin biosynthesis protein RibF [Bacteroides clarus YIT 12056]
 gi|328524012|gb|EGF51088.1| riboflavin biosynthesis protein RibF [Bacteroides clarus YIT 12056]
          Length = 306

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +   I   + LP      V  IG FDG+H GH  ++EQ  K A       +V++F  H
Sbjct: 1   MQLCSRISGKELLP-----SVATIGFFDGVHRGHRFLIEQVCKAAAARGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q       L+    +  +L   G    +   FTL+ A  SA+QF+  +  +  +V
Sbjct: 56  PRKVMQPGFHPELLTTCDEKVALLAGTGVDYCVMLDFTLDLARLSAKQFMAALKQD-YQV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G + G   +       + +  VSSS +R  L +G+
Sbjct: 115 QALVIGYDHRFGHNRSEGFDDYVRYGRELGMEVILAQAYSTD-AMTVSSSAVRRLLLEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ +  S  ++  +GVYA+ +    + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDSEKLVPADGVYAV-YVFLGEK 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF+F  +IY Q   +SF    RPE+KF  I +L  
Sbjct: 233 KHTGMLSIGYRPTLNNGIDRSIEVHIFNFDADIYDQPMRLSFVRRTRPELKFDSIGELIA 292

Query: 297 YMGEDEKKARKILE 310
            + +DE +   IL 
Sbjct: 293 QLHKDEAEITAILS 306


>gi|292670910|ref|ZP_06604336.1| riboflavin biosynthesis protein RibF [Selenomonas noxia ATCC 43541]
 gi|292647531|gb|EFF65503.1| riboflavin biosynthesis protein RibF [Selenomonas noxia ATCC 43541]
          Length = 319

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 106/300 (35%), Positives = 159/300 (53%), Gaps = 7/300 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H+GH  ++  A+K A        V SF  HPR +I        +   S++
Sbjct: 18  VIALGMFDGLHIGHQEVIRTAVKKAQEIKGTALVFSFANHPRAVIVPEGAPHRIGCQSVR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +IL+ +G  AL+   FT   A  +A  FI  +  ++   K ++ G  + FG+   G+  
Sbjct: 78  LRILKNLGVDALVEIAFTSSFAETTANGFIHLLQ-QYFAPKYIVVGENYTFGRGGRGNPN 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+++  +YGFH +    +       VSS+ IR  L +G + +    LGY FT+   VIH
Sbjct: 137 LLKEQSGRYGFHLIVCPPVLY-GGVPVSSTRIRALLAQGDLSHVNAYLGYPFTVTGTVIH 195

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GRTLGFPTAN+ L         GVYA+      + SY GVAN G NPT        
Sbjct: 196 GQERGRTLGFPTANVSLHESYESPPNGVYAV-MVVHKKHSYHGVANIGNNPTF-GGYDRR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           LE  I DFS ++Y    TVSFF  +R E +F   ++L I + +D++ A K L+ S+ L E
Sbjct: 254 LEVHIIDFSGDLYDSEITVSFFFKIRDEQRFSTADELIIQIKKDKEAAIKGLKESFRLQE 313


>gi|22299099|ref|NP_682346.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Thermosynechococcus elongatus BP-1]
 gi|22295281|dbj|BAC09108.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
           BP-1]
          Length = 315

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 89/295 (30%), Positives = 146/295 (49%), Gaps = 6/295 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
              +A+GNFDG+H GH  ++   +K    +   +V++F+PHP+        +  L+P + 
Sbjct: 18  PTAIALGNFDGVHRGHQEVIRTLLKAAPPDCYPSVMTFSPHPQAFFTGEERL-LLTPEAE 76

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L + G + +I   FT   A  S  +F++++LV+ L+ K +  G  F FG+ R+G  
Sbjct: 77  KRALLHQCGIAQVIVLPFTQALAQLSPLEFVEQILVQQLQAKVLSVGFNFGFGRGRSGTA 136

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+     +G     +       S  VSSS +R AL  G V  A  LLG  +T+   V 
Sbjct: 137 EDLRSLCAPFGIVVHIVPPYC-RGSDRVSSSAVRAALAAGEVALARELLGRAYTLTGTVT 195

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
            GE++GR LGFPTAN+ L  + +L + GVYA R         + GV N G  PT+     
Sbjct: 196 QGEQLGRQLGFPTANLVLPREKLLPRYGVYACRVSGPALPREHLGVVNIGVRPTV-GGQE 254

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +  E  +  +   +Y Q  T+    ++RPE+    +  L+  +  D + A  +LE
Sbjct: 255 VRTEVHLLHWQGNLYNQEITLHLEAFIRPELTLPSLAALRAQIAADCQVAVDLLE 309


>gi|148242837|ref|YP_001227994.1| riboflavin biosynthesis protein ribF (riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. RCC307]
 gi|147851147|emb|CAK28641.1| Riboflavin biosynthesis protein ribF (Riboflavin kinase / FMN
           adenylyltransferase) [Synechococcus sp. RCC307]
          Length = 321

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 7/304 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI---TVLSFNPHPRTIIQSSSPIFT 71
              +   +A+G+FDG+H GH  ++ +A+ +A   P    TVLSF PHPR ++    P   
Sbjct: 17  QACRPTALALGSFDGVHAGHRHVIARAVAMAAGPPALVPTVLSFWPHPREVLAGE-PRLR 75

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L  P+ +  +L  +G   L+   F L+ A  + EQF+Q+VL + L+   V+ G  FRFG 
Sbjct: 76  LDLPNEKLSVLGPLGIEQLVLVPFDLQLAALTPEQFVQQVLRDQLQAGAVVIGENFRFGN 135

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
            R+G    LQ+ G   G     +  L +      SSS IR AL +  ++ A  LL   + 
Sbjct: 136 RRSGGPEDLQRLGGSCGMAVDVL-PLLDEGGSRYSSSRIRQALAEADLVEAERLLQRPYR 194

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIR-FRTQDQTSYSGVANFGRNPT 249
               V+ G  +GR LG+PTAN+Q+     L KEGVYA   +R   Q +   V N GR PT
Sbjct: 195 FSGQVVRGRGLGRGLGWPTANLQVDGRKCLPKEGVYAAWAWRGDSQQAMPAVMNLGRQPT 254

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + P  P  +E  + D   ++ G    V    +LR +  F  +++L   +  D  +AR +L
Sbjct: 255 IDPEAPSAVEVHLLDAEVDLAGDSLRVQPLQWLRGQQAFGSLDELTGQISRDADQARALL 314

Query: 310 ESSY 313
             + 
Sbjct: 315 AGAQ 318


>gi|315604468|ref|ZP_07879534.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315314174|gb|EFU62225.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 329

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+H++     +P + +  VV IGNFDG+H GH  ++   ++ A    +    ++F+PH
Sbjct: 1   MKVWHSL---AEIPGN-ESAVVTIGNFDGMHNGHKKVIATCVERARKLGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +    +  +SP   +   +   G  A +   +     +  A++F+ + LV     
Sbjct: 57  PIQVHRPEVGLQLISPLRDRLDAMAAAGLDATLVAHYDASVYSLDADEFVDEYLVGRCGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  FRFG+  AG    L+  G  YGF  + + ++   + +  SSS +R  L  G 
Sbjct: 117 REVVVGEDFRFGRANAGTIDTLRALGRSYGFDVITVTDIEAPEGRRWSSSWVRELLAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR-----T 232
           V  AA +LG+   I   V HG K GR LGFPTAN+      ++  +GVYA         T
Sbjct: 177 VSGAARVLGHLHRIRGSVCHGFKRGRALGFPTANLSEDVEGVIPADGVYAGWVVRAVPGT 236

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDI 291
           Q         + G NP         +E+ +       +YG+R  V+F   +RP   F  +
Sbjct: 237 QSAEFLPAAISVGTNPQF-SGETRTVEAHVLGRSDLNLYGERIAVTFVSRIRPMQSFASL 295

Query: 292 EKLKIYMGEDEKKARKIL 309
           + L   M +D ++   IL
Sbjct: 296 DDLLTQMDDDLRQTASIL 313


>gi|228475006|ref|ZP_04059734.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis SK119]
 gi|228270991|gb|EEK12379.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis SK119]
          Length = 323

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+  Q +   +    +A G FDG+H GH  + E         N    V +F+PH
Sbjct: 4   IEITHPIQNEQLIKEDV---AMAFGFFDGMHRGHSKVFEALDIRAKEKNLKKAVTTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E+      I   F+   AN +AE+FI+  ++    
Sbjct: 61  PSVVLNPERKRTDYLTPLSDKLEMIEQHDIDYCIVINFSSRFANVTAEEFIKDYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F FGK   G+  +L +  E   F+T  + +L +  S+ +S+++IR AL +G
Sbjct: 120 VKEVVAGFDFTFGKFGKGNMAVLNEIDE---FNTTIVGKL-DLDSEKISTTSIRQALHEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLQKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEH 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDA 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+++A+ +L   +
Sbjct: 296 LVSQMNDDKERAKYLLAVDF 315


>gi|58337531|ref|YP_194116.1| riboflavin kinase [Lactobacillus acidophilus NCFM]
 gi|227904172|ref|ZP_04021977.1| FAD synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|58254848|gb|AAV43085.1| riboflavin kinase [Lactobacillus acidophilus NCFM]
 gi|227868191|gb|EEJ75612.1| FAD synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 309

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 84/316 (26%), Positives = 157/316 (49%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M + H   +   +  ++     V+A+G FDG+HLGH  ++ +A +I    N P+ V++F+
Sbjct: 1   MKIIH---LTYPVKENILNSKVVLALGFFDGVHLGHQRLITRAREIANQKNLPVIVMTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ I         L     +   + K+G   L    FT + +  SA++F+  V+V  L
Sbjct: 58  RHPKEIYADKKNFKYLETLDEKADKMAKLGVDYLAVMPFTKDFSQISAQKFVDNVIV-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              TV+ G  + +G     +   L    +  G   + +   +    + + S+ IR A+  
Sbjct: 117 NADTVVAGFDYTYGPKNIANMDNLPNFAK--GRFNIVVMPKQVFDGKKIGSTEIRQAIKD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ 235
           G +  A  L+G+ + +   V HG++ G  LGFPTAN++ +   ++ K GVYA + +    
Sbjct: 175 GKMELAYELMGHHYVMSGIVGHGKRNGHKLGFPTANLEWANHKVIPKIGVYATKTKVNG- 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  + + G N T+  N  + +ES IFDF ++IYG+   + ++ Y R EIKF  +++L+
Sbjct: 234 KWHESMTSVGYNVTIGQNKRIYIESNIFDFDEDIYGKPIEIKWYKYTRGEIKFAGLDELR 293

Query: 296 IYMGEDEKKARKILES 311
             + +D+ + +     
Sbjct: 294 EQLEKDQDEIKAYFAK 309


>gi|294670525|ref|ZP_06735405.1| hypothetical protein NEIELOOT_02247 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307804|gb|EFE49047.1| hypothetical protein NEIELOOT_02247 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 308

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 105/314 (33%), Positives = 152/314 (48%), Gaps = 15/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +       Q+ P       V IGNFDG+HLGH  IL++      A     T + F P 
Sbjct: 1   MKILLGGTPVQNAP----PAAVTIGNFDGVHLGHRHILQRLKSEAAARGLQSTAVVFEPQ 56

Query: 59  PRTII---QSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P       + S P   L+P   + ++L + G    +   +F    +   AE FI+ +L  
Sbjct: 57  PAEFFARLRGSEPPPRLTPLRDKLRLLHESGCVDNVRVLRFNRAFSQMPAEDFIEHILQR 116

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+ + ++ G  FRFG+DRAG   +LQ  G   GF T     +        SS+ +R AL
Sbjct: 117 ELDTRYLLVGDDFRFGRDRAGSFDLLQNHG---GFVTERTPSILV-AGIRASSTAVRQAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  +LG+   +   V HG K+GRT+G PTAN+ L P      GV+ +      
Sbjct: 173 REGRLKEAEQILGHGCVLSGRVAHGRKLGRTIGSPTANIHLPPHRYALNGVFVVEASGT- 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GVA+FG NPT+  +G   LE  +FDFS  +YGQR  V F   LR E KF D+E+L
Sbjct: 232 FGKRRGVASFGLNPTVSDSGRQKLEVHLFDFSGNLYGQRLFVRFLHKLRDEEKFGDMEQL 291

Query: 295 KIYMGEDEKKARKI 308
           +  +  D + A+  
Sbjct: 292 RRQIATDIRAAKSW 305


>gi|281424888|ref|ZP_06255801.1| riboflavin biosynthesis protein RibF [Prevotella oris F0302]
 gi|281401006|gb|EFB31837.1| riboflavin biosynthesis protein RibF [Prevotella oris F0302]
          Length = 313

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 7/303 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
            N +   V  IG FDG+H GH  +++  I  A       TV++F+ HPR ++ S      
Sbjct: 10  NNAIAPCVATIGFFDGVHRGHQYLIKHVIDKAKACGLASTVITFDRHPRQVLHSDYVPQL 69

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +  +L K G        F   TA  SA  F+++VL + L VK +I G   RFG 
Sbjct: 70  LTTLENKLLLLSKTGIDNAAVLPFDEATARLSAFDFMRQVLHDRLNVKQLIIGYDNRFGH 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R  D     + G + G   +       N    VSSS IR+ L  G +  A   LGY +T
Sbjct: 130 NREEDFEDYVRYGNELGIEVIHNQAYVLN-GVNVSSSVIRSFLQAGEIEMATLCLGYSYT 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ-TSYSGVANFGRNP 248
           +   V+HG   GR +GFPTAN+    S  ++   GVYA++ + ++  T   G+ N G  P
Sbjct: 189 LVGKVVHGFAQGRKMGFPTANIDTTESGQLVPAPGVYAVKVKIENTVTLLHGMMNIGMRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T      L LE  IF+   ++YG++  V F   +R E KF +   L   + +D  +  + 
Sbjct: 249 TF-DGSKLTLEVNIFNLQGDLYGKQLQVVFIHRIREERKFNNALGLAEQLQKDRLQIEEQ 307

Query: 309 LES 311
            + 
Sbjct: 308 FKK 310


>gi|110798760|ref|YP_696369.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens ATCC 13124]
 gi|168211430|ref|ZP_02637055.1| riboflavin biosynthesis protein RibF [Clostridium perfringens B
           str. ATCC 3626]
 gi|182626386|ref|ZP_02954140.1| riboflavin biosynthesis protein RibF [Clostridium perfringens D
           str. JGS1721]
 gi|110673407|gb|ABG82394.1| riboflavin biosynthesis protein RibF [Clostridium perfringens ATCC
           13124]
 gi|170710563|gb|EDT22745.1| riboflavin biosynthesis protein RibF [Clostridium perfringens B
           str. ATCC 3626]
 gi|177908337|gb|EDT70885.1| riboflavin biosynthesis protein RibF [Clostridium perfringens D
           str. JGS1721]
          Length = 309

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|289550936|ref|YP_003471840.1| Riboflavin kinase/FMN adenylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658438|ref|ZP_07911310.1| riboflavin biosynthesis protein RibF [Staphylococcus lugdunensis
           M23590]
 gi|289180468|gb|ADC87713.1| Riboflavin kinase/FMN adenylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496767|gb|EFU85090.1| riboflavin biosynthesis protein RibF [Staphylococcus lugdunensis
           M23590]
          Length = 323

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 105/320 (32%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + E       A+N    V++F+PH
Sbjct: 4   IEVTHPIQPEQLINEDV---AMAFGFFDGMHKGHLKVFETLNERAEAHNLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P + + +++E+      I   F+   A+ +AE F+Q  ++    
Sbjct: 61  PSVVLNPKRKRTTYLTPLTDKLEMIEQQNIDYCIVINFSSRFADVTAEDFVQNYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F +GK   G+  +L++  +   F+T  + + +  +++ +S++ IR AL +G
Sbjct: 120 VKEVVAGFDFTYGKFGKGNMTVLKEMDD---FNTTIVGK-QEIEAEKISTTAIRQALQEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
           H+  A + LGY + ++  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 HLQKANNELGYLYRLKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMAIGAEK 235

Query: 237 S-YSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ 
Sbjct: 236 RLYRGVANVGVKPTFHDPSKAEIVIEVNIFDFDENIYGERVIVYWHHYLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ KA+ +L   +
Sbjct: 296 LVEQMNEDKAKAQYLLAVDF 315


>gi|194333214|ref|YP_002015074.1| riboflavin biosynthesis protein RibF [Prosthecochloris aestuarii
           DSM 271]
 gi|194311032|gb|ACF45427.1| riboflavin biosynthesis protein RibF [Prosthecochloris aestuarii
           DSM 271]
          Length = 321

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 15/316 (4%)

Query: 1   MHV--FHNIEIN-----QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPIT 51
           MHV  +HN  ++     Q  P  L    V +G++DG+H+GH  I+ + + I         
Sbjct: 1   MHVAEYHNGSVSYTTTGQDNPFPLMASAVTVGSYDGVHVGHRRIIGRMLDIASQERLRSV 60

Query: 52  VLSFNPHPRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
           V++F PHPR +I S   S I  L+ PS +  ++E +G   L   +F    A+ S+E FIQ
Sbjct: 61  VVTFEPHPRQVIASGRSSAIELLTLPSEKRLLMESLGIDVLFVVRFDALFASRSSEWFIQ 120

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +L++ +  + ++ G    FG+DR G R  L+K   + GF    +DE+R +  +  SS+ 
Sbjct: 121 HILLDLIGARHIVIGYDHGFGRDRTGGRRTLEKLAGERGFSVDVVDEVRLHD-EHFSSTR 179

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYA 227
           IRT L +G +  A   LG  + I   V+HG+ +GR +GFPT N++L     +L + GVY 
Sbjct: 180 IRTLLHEGRLREANAFLGAPYMISGQVVHGQGLGRKIGFPTVNIKLADPDKLLPRHGVYI 239

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                 D   Y  + N G  PT+      ++E+ I  +S  +YG+   +  F+ LR E K
Sbjct: 240 AETH-LDGQKYKVMMNIGIRPTVSDGSGAVIEAHILGYSSSLYGREVHLWLFERLRDEKK 298

Query: 288 FKDIEKLKIYMGEDEK 303
           F+ ++ L+  + +D+K
Sbjct: 299 FESLDALREQLQKDKK 314


>gi|319941943|ref|ZP_08016264.1| hypothetical protein HMPREF9464_01483 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804596|gb|EFW01466.1| hypothetical protein HMPREF9464_01483 [Sutterella wadsworthensis
           3_1_45B]
          Length = 332

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 102/300 (34%), Positives = 149/300 (49%), Gaps = 11/300 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           MHVF  +      P       VAIGNFDG+H GH  +L   +  A    +   VL+F PH
Sbjct: 16  MHVFRGL----PSPLQRIPSAVAIGNFDGVHTGHQALLAGLVDAARERGLVPSVLTFEPH 71

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR       P+  +S    + K L   G   +    F    A   AE F+  VLV  L+ 
Sbjct: 72  PREFFPHLDPVPRISTLCDKVKRLLDCGIERIYMMPFNEHIAREGAEAFVTNVLVNGLDA 131

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  FRFG  RA     L++ G+++ F T +I  L  + +  VSS+ +R AL++G 
Sbjct: 132 RWVTVGEDFRFGSGRAAGAHDLERLGKEHHFET-WISPLLFHGTAKVSSTRLRAALSEGD 190

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD----ILLKEGVYAIRFRTQD 234
              A  +LG+ +T+   VIHG+ +GRTLG+PT N+   P          GV+A++     
Sbjct: 191 FYEAEMMLGHPYTMSGRVIHGQALGRTLGYPTLNIAPIPPGSRARPALAGVFAVKVSGLG 250

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                GVA+ G  PT+      LLE+ +FD+  + YG+  TV F + +R E KF  +E+L
Sbjct: 251 PAEQCGVASLGLRPTVSSARRWLLETHVFDWKGDAYGRPVTVRFIERIRGEKKFSGLEEL 310


>gi|319401438|gb|EFV89648.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           FRI909]
          Length = 323

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +        +     V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++ + G    I   F+   A+ +++ FI+  ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFASVTSDDFIKNYIINN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESKA---FNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPARAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ KA+ +L   +
Sbjct: 296 LVKQMNEDKAKAKHLLSIDF 315


>gi|310778666|ref|YP_003966999.1| riboflavin biosynthesis protein RibF [Ilyobacter polytropus DSM
           2926]
 gi|309747989|gb|ADO82651.1| riboflavin biosynthesis protein RibF [Ilyobacter polytropus DSM
           2926]
          Length = 313

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 149/314 (47%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  NI   +          VAIG+FDGIH GH  ++  A+K     N    V +F  H
Sbjct: 1   MKIIENIFTTE---EKFPNTYVAIGSFDGIHSGHKEVICSAVKRAKEKNGKSVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++  +     ++    +  ILE MG   +I   F  E +  +   F+++VL E L  
Sbjct: 58  PMEVVDKNRAPKLINSKEEKIHILEDMGVDYIIFQPFDNEFSTMAPFDFVEEVLKEKLSA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FG+        L + G+        I  ++ +  +++SS+ IR  +TKG 
Sbjct: 118 KEIFVGFNFSFGEGGVAKTDDLIELGKAVNIKVNKIPPVKIDD-RVISSTLIRKLITKGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTS 237
           +      LGY   I  +VIHG+K GR +GFPTAN+ +   +    G+Y    +   D+  
Sbjct: 177 LDRVKEYLGYPVFIIGEVIHGKKYGRKMGFPTANLSILNKVYPPFGIYGASVKIEGDEKE 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  V N GRNPT+ P G   +E  I DF + IYG++  V    +LR E +F  +++LK  
Sbjct: 237 HDAVVNIGRNPTLKP-GEQSIEVHILDFDEYIYGKKLYVKLVKFLREEKRFSSMDELKKV 295

Query: 298 MGEDEKKARKILES 311
           +  D    +  LE 
Sbjct: 296 IRNDVMTWKNYLEE 309


>gi|56708017|ref|YP_169913.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670488|ref|YP_667045.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457098|ref|ZP_03665571.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370500|ref|ZP_04986505.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874816|ref|ZP_05247526.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604509|emb|CAG45549.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320821|emb|CAL08932.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568743|gb|EDN34397.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840815|gb|EET19251.1| riboflavin biosynthesis protein ribF [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159205|gb|ADA78596.1| riboflavin biosynthesis protein RibF [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 306

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 171/313 (54%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  N+   +          +AIG+FDG+HLGH  I+++ + IA  + +   +L F P 
Sbjct: 1   MKIITNLNKTKDF----LPKAIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L  
Sbjct: 57  PKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT   
Sbjct: 117 KHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y
Sbjct: 176 LIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ +
Sbjct: 235 -GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQI 292

Query: 299 GEDEKKARKILES 311
            +D + A+K++ +
Sbjct: 293 SKDIQTAKKLIST 305


>gi|220931632|ref|YP_002508540.1| FMN adenylyltransferase;riboflavin kinase [Halothermothrix orenii H
           168]
 gi|219992942|gb|ACL69545.1| FMN adenylyltransferase;riboflavin kinase [Halothermothrix orenii H
           168]
          Length = 307

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +  + +       + +  VVA+G+FDGIHLGH  ++    K+      P  V +F+ H
Sbjct: 1   MKIVQSSKFGLI---NKEPVVVALGSFDGIHLGHQKVITTVCKMGKQLGIPCGVYTFDKH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I       +L     +  +LE+MG        FT + +     +F++++L + L+ 
Sbjct: 58  PLKVINPDIAPQSLMSRDQKISLLEEMGVDYYFEQVFTTDFSKLPFNKFVREILAKKLKA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  FRFG   AG+   L+  G++ GF       ++    + +SS+ IR+ + +G 
Sbjct: 118 KHVVVGEDFRFGNRGAGNINSLKVLGKELGFGVTVC-SIKRAHGRKISSTTIRSLIREGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +      LG  + ++  VIHG+  G+TLG PTAN++L  D  L   GVYA+  R  D+  
Sbjct: 177 IKEIPDYLGRYYQLDGTVIHGDGRGKTLGIPTANLRLKADFALPPNGVYAVYVRY-DKQL 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+ANFG  PT        +E  + DF  ++YGQ   V   D++RPEI F+  ++L   
Sbjct: 236 YKGIANFGDRPTF-SGADYSIEVHLLDFDGKLYGQVILVDLVDFIRPEITFESPQELINQ 294

Query: 298 MGEDEKKARKIL 309
           + +D      +L
Sbjct: 295 IRKDILYTASLL 306


>gi|110803323|ref|YP_698969.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens SM101]
 gi|110683824|gb|ABG87194.1| riboflavin biosynthesis protein RibF [Clostridium perfringens
           SM101]
          Length = 309

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 91/293 (31%), Positives = 157/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I  +     L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKAGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFNKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|297566071|ref|YP_003685043.1| riboflavin biosynthesis protein RibF [Meiothermus silvanus DSM
           9946]
 gi|296850520|gb|ADH63535.1| riboflavin biosynthesis protein RibF [Meiothermus silvanus DSM
           9946]
          Length = 296

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 108/307 (35%), Positives = 154/307 (50%), Gaps = 15/307 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ 64
           + IN          VVAIG+FDG+HLGH  +L QA++ A     P+ V +F+P P  +  
Sbjct: 2   LLINDPADAPPGPKVVAIGSFDGLHLGHQHLLRQALREAKALHMPLLVYTFDP-PSKVFM 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L+  + + ++L ++G    +   F    A  S E F+Q +    LE K +  G
Sbjct: 61  KGEGF--LTDLTEKTELLRELGVEIALIVPFNETFAQRSKEDFLQDL--RGLEAKEIYVG 116

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFGK RAG    LQ            I  L       V SS IR  L +G V     
Sbjct: 117 EDFRFGKGRAGGLEDLQS------VAPTKILPLLELFESPVKSSRIRDLLREGKVEEVQP 170

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  +     V+ G+K GRTLG+PTAN++++P  +L  GV+A+R RT  Q +Y GVAN 
Sbjct: 171 LLGRPYAARGIVVEGDKRGRTLGYPTANLEVAPGKVLPLGVFAVRARTA-QGTYGGVANI 229

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+     L  E  +FDF  ++YG+   V F   +R E KF  +E+LK  +  D ++
Sbjct: 230 GHRPTV-DGHTLRFEVHLFDFRGDLYGEDMKVEFLKKIRDEKKFSTLEELKAQIERDAEE 288

Query: 305 ARKILES 311
           AR+ L  
Sbjct: 289 ARRYLSQ 295


>gi|332527598|ref|ZP_08403645.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rubrivivax
           benzoatilyticus JA2]
 gi|332112001|gb|EGJ11978.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rubrivivax
           benzoatilyticus JA2]
          Length = 320

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 91/322 (28%), Positives = 144/322 (44%), Gaps = 14/322 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF   +          G  + IGNFDG+H GH  +L   +           V++F PH
Sbjct: 1   MRVFRGFDHPGL---REAGCALTIGNFDGVHRGHQAMLAMLVNEARHRGLASCVMTFEPH 57

Query: 59  PRTIIQS-----SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR          S     ++    +   LE+ G   ++  +F    A+ + E F+++VL 
Sbjct: 58  PRDFFARRAGDASRAPARIATLRDKLAELERCGVDHVVVARFDERLASLAPEAFVEQVLQ 117

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFG  R G   +L + G + GF    +     +    VSSS +R A
Sbjct: 118 KNLNARYVLVGDDFRFGARREGTYAMLDEAGTRLGFDVARMLSYEVH-GLRVSSSAVRDA 176

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +  AA LLG  ++I    IHG K+GR LGF T N++         G++ +R    
Sbjct: 177 LAAGDMKRAAVLLGRPYSISGHAIHGRKLGRELGFRTLNLRFPHPRPAAGGIFVVRVYGL 236

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI---YGQRCTVSFFDYLRPEIKFKD 290
            + +  GVA+ G  PT+   G +LLE+   ++       YG+   V     L  E ++  
Sbjct: 237 AERALPGVASLGTRPTVENAGRVLLETHCLEWPLGPEAGYGRVLRVELLHKLHDERRYPS 296

Query: 291 IEKLKIYMGEDEKKARKILESS 312
           +E L+  + +DE  AR    + 
Sbjct: 297 LEALREGIAQDEADARAWFAAQ 318


>gi|282889771|ref|ZP_06298310.1| hypothetical protein pah_c004o144 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500345|gb|EFB42625.1| hypothetical protein pah_c004o144 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 307

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 102/312 (32%), Positives = 159/312 (50%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V H++      P+     V+ IGNFDG+HLGH  +L+   + A   N+   V +F  H
Sbjct: 1   MKVIHHL---HEFPSTNHPIVLTIGNFDGMHLGHQKVLQALKEFAKLQNAQTAVFTFVNH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++ S+     L     +  +LE+     +I   FTLE A  +AE F++K+    +  
Sbjct: 58  PSTVLNSAKSTCQLCTLDHKLFLLEQAKIDWVILLPFTLEFAGQTAEIFLEKLQAS-IPF 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G     GKDR GDR  L +  +++ F   ++ E   + ++ +SSS IR  +  G 
Sbjct: 117 SHLILGHDAFLGKDRKGDRSTLNQIAKEHAFELTYLPEYSID-TKKISSSAIRQLIADGK 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+ LLG  ++    V  G++ GR LGFPTAN  ++   L   GVYA++   Q    +
Sbjct: 176 LSEASQLLGRSYSFYGMVKPGQRKGRHLGFPTANFDVTGMCLPPYGVYAVKLWHQG-ICF 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             VAN G  PT+      +LE  + D  + ++Y   C V F  ++RPE KF  IE LK  
Sbjct: 235 PAVANLGIAPTIREENNPVLEVHLLDAQENDLYDSFCEVVFHSFIRPEQKFSSIEHLKAQ 294

Query: 298 MGEDEKKARKIL 309
           + +D  +AR+ L
Sbjct: 295 ISQDVLQARQCL 306


>gi|27467867|ref|NP_764504.1| FAD synthase RibC [Staphylococcus epidermidis ATCC 12228]
 gi|57866762|ref|YP_188421.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           RP62A]
 gi|251810703|ref|ZP_04825176.1| FAD synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876296|ref|ZP_06285163.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           SK135]
 gi|293366764|ref|ZP_06613440.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315412|gb|AAO04546.1|AE016747_43 riboflavin kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57637420|gb|AAW54208.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           RP62A]
 gi|251805863|gb|EES58520.1| FAD synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295321|gb|EFA87848.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           SK135]
 gi|291319065|gb|EFE59435.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329724337|gb|EGG60849.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU144]
 gi|329736363|gb|EGG72635.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU028]
 gi|329736643|gb|EGG72909.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU045]
          Length = 323

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +        +     V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++ + G    I   F+   AN +++ FI+  ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFANVTSDDFIKNYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESKA---FNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPTRAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ +A+ +L   +
Sbjct: 296 LVKQMNEDKAQAKHLLSIDF 315


>gi|319760261|ref|YP_004124199.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318038975|gb|ADV33525.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 315

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   +    ++  + KG ++A+GNFDG H GH L++    +   N   PI V+ F PH
Sbjct: 1   MELIRGL---HNIKPYHKGCILAMGNFDGFHRGHQLLINILCEKKKNYKLPIMVMIFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR        I  LS    + + L   G   ++   F  + A+  A  F++K+L+  L V
Sbjct: 58  PREFFSKIVRI-RLSKFRDKIQYLFTAGVDIILCIAFNKKFASTEAYNFVKKILIYKLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG  R GD   L+K G + GF    I+   +   Q +SS++I+ AL +  
Sbjct: 117 QFICIGNDFRFGACRKGDYKFLKKIGNQEGFQVACIETCVDKLGQKISSTSIKIALMEDR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +++A  L+G+ + +   VIHG K+GR +GFPTAN+ L    L   GVYA+          
Sbjct: 177 IMDAEFLMGHAYRVFGKVIHGNKLGRIIGFPTANVFLQGKQLPMNGVYAVTVYGVCDLPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G  PT+  +    LE  IF+ S ++Y +  TV F   +R E  F+ I  LK  +
Sbjct: 237 PGIANIGIRPTITGSSIQQLEVHIFNISIDLYLRYITVVFLKKIRNEQYFRSIRMLKNQI 296

Query: 299 GEDEKKARKILES 311
             D     +  + 
Sbjct: 297 KNDMLIVCEYFKK 309


>gi|315648090|ref|ZP_07901191.1| riboflavin biosynthesis protein RibF [Paenibacillus vortex V453]
 gi|315276736|gb|EFU40079.1| riboflavin biosynthesis protein RibF [Paenibacillus vortex V453]
          Length = 317

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 108/300 (36%), Positives = 162/300 (54%), Gaps = 8/300 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
              +  V AIG FDG+HLGH  +L  A+     N  P  +++F PHP+ +I   S    L
Sbjct: 17  EAAEPKVAAIGQFDGLHLGHASVLSTAVNIARDNGVPAALITFYPHPKDVIGKGSYEGYL 76

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +P   ++++LE+MG   L   +F  E +  S E F++++L+  L ++T + G  FRFG  
Sbjct: 77  TPQPDKQQLLEEMGIDILYIVEFNKEFSQVSPETFVEEMLLP-LNLQTAVVGFDFRFGHK 135

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            AGD   LQ+ GE      V +     +  + V SS+IR AL  G + +A    G  + I
Sbjct: 136 GAGDAVKLQELGEGR-MTVVTVPPFLVD-GEKVGSSSIRIALKTGQLSDANRWFGRNYRI 193

Query: 193 ESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTM 250
              VIHGEK GR +GFPTAN++L  P ++   GVYA+R RT    ++  GV N G  PT 
Sbjct: 194 RGSVIHGEKRGRKIGFPTANLELTDPYVVPALGVYAVRARTNKHDNWIPGVMNIGVKPTF 253

Query: 251 VPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +AR+IL
Sbjct: 254 HEGITEPIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARRIL 313


>gi|259046775|ref|ZP_05737176.1| riboflavin biosynthesis protein RibF [Granulicatella adiacens ATCC
           49175]
 gi|259036543|gb|EEW37798.1| riboflavin biosynthesis protein RibF [Granulicatella adiacens ATCC
           49175]
          Length = 316

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSP--IFTLS 73
           +  V+A+G FDGIHLGH  ++  A K        + V+SFN HP  I Q+  P  I  +S
Sbjct: 18  EPIVLALGFFDGIHLGHKEVITTAKKVAEERGYKVAVMSFNQHPSVIFQNVDPDSIQYVS 77

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           P   ++++L+++G        FT E    S ++F+ + +V  L  K V+ G  + +GK  
Sbjct: 78  PIERKKELLKELGVDIFYLVDFTKEFGALSPQEFVDQYIV-GLNAKVVVAGFDYTYGKRD 136

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             +  +L K      F  + I E +++  + +SS+ +R  L +G +  A  LLGY + ++
Sbjct: 137 VANMELLPKY-ASNRFEIISIPEQKSDNGK-ISSTAVRDLLLQGEIEKANELLGYDYIMD 194

Query: 194 SDVIHGEKIGRT-LGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+HG   G   LGFPTAN+++S D  LLK GVY +    +      G+A+ G NPT  
Sbjct: 195 GVVVHGFGRGSKMLGFPTANIEVSNDTFLLKNGVYIVEMFVEG-KWIPGMASIGINPTFD 253

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               + +E  + DF ++IY     V +  YLRPE+KF+ I+ L   + +DE+  R   ++
Sbjct: 254 DVHKVTIEVNLLDFDKDIYHLPVRVKWLKYLRPELKFEGIDALIAQLKKDEQDTRNYFKT 313

Query: 312 SY 313
             
Sbjct: 314 KR 315


>gi|221632776|ref|YP_002521998.1| riboflavin biosynthesis protein RibF [Thermomicrobium roseum DSM
           5159]
 gi|221156125|gb|ACM05252.1| riboflavin biosynthesis protein RibF [Thermomicrobium roseum DSM
           5159]
          Length = 334

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 13/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +  +       P+     VV IGNFDG+H GH  +L            P   ++F+P 
Sbjct: 1   MRIIRSWSDIPPEPH-----VVTIGNFDGVHRGHQYLLTTVHERAATRGLPSLAITFDPL 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        LS    + +++   G   ++  +F    A  S ++F+  +LV+   +
Sbjct: 56  PLEVLAPERAPQRLSLTDQRLRLILACGIDRVLLVQFDRSFAALSPKEFVD-LLVQSTHL 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G  F FG+ R GD  +L++ G  +GF  V +  L    S+ +SS+ IR  +  G 
Sbjct: 115 TTIVVGEDFHFGRGRTGDPALLRELGRSHGFEVVVLPRLSEL-SETISSTRIRQLIAAGA 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTS 237
           V  A  LLG  + +   V+ G   G  LGFPTAN+ ++  ++L  +G+YA        + 
Sbjct: 174 VREAGTLLGRPYALTGTVVAGTGRGSQLGFPTANIAVADRLMLPGDGIYAAIAHLSG-SW 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  +A  G  PT    G   +E ++ D +   + G+  TV F + +RP+  F D E L  
Sbjct: 233 YPALAYIGSRPTFPGAGH-AVEVYLIDQTYPTLRGETITVYFIERIRPDRAFPDAEALVE 291

Query: 297 YMGEDEKKARKILESS 312
            M +DE+  R +L+++
Sbjct: 292 QMRDDERNGRAVLQAA 307


>gi|121595698|ref|YP_987594.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Acidovorax
           sp. JS42]
 gi|120607778|gb|ABM43518.1| FMN adenylyltransferase [Acidovorax sp. JS42]
          Length = 347

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 145/352 (41%), Gaps = 36/352 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +F      +  P       + IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGFHHPEVAPA----CALTIGNFDGVHRGHQAMLALLNSEAQHRGVQSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L + G    I   F  + A  + + FI  V+V
Sbjct: 57  PRDYFAGVHKRPDLAPARIGTLRDKLSELARCGVQQTIVLPFNEKLARQAPQAFIDDVVV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + ++ G  FRFG  RAGD  +L   G + GF    ++    +    VSSS +R A
Sbjct: 117 GGLGARYLLVGDDFRFGAQRAGDYAMLDTAGRERGFEVARMNSYEVH-GLRVSSSAVRDA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL-----------GFPTANMQLSPDILLK 222
           L  G +  A  LLG  + I   V+HG K+GR+L           GF T N++ +      
Sbjct: 176 LGAGDMEEATRLLGRPYAISGHVVHGRKLGRSLGRSAASGPHQDGFRTLNLRFAHWKPAA 235

Query: 223 EGVYAIRFRTQDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQR 273
            G++A+     D     GVAN G  P++ P     G +LLE+    +   +     YG+ 
Sbjct: 236 SGIFAVLVHGLDAEPLPGVANLGVRPSLDPSDVNGGRVLLETHCLQWPAHLGAEGAYGKI 295

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP----LSERDRI 321
             V     L  E+K+  +  L   + +D   AR    SS+      + RDRI
Sbjct: 296 VRVELLHKLHDELKYDSLGALTTGIAKDCDDARAYFASSHAETRRQTTRDRI 347


>gi|242242555|ref|ZP_04797000.1| FAD synthetase [Staphylococcus epidermidis W23144]
 gi|242233982|gb|EES36294.1| FAD synthetase [Staphylococcus epidermidis W23144]
          Length = 323

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ NQ +  ++    +A G FDG+H GH  + +        +     V++F+PH
Sbjct: 4   IEVTHPIQSNQFITENV---AMAFGFFDGMHRGHDKVFQVLDEKAKEHQLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++ + G    I   F+   A+ +++ FI+K ++    
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKLEMIAEHGIDYCIVINFSSRFASVTSDDFIKKYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +   S+ +S++ IR ALT G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQESKA---FNTTIVGK-QEMDSEKISTTAIRQALTDG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           H+  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 HLQKANDELGYIYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMEIGPES 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             + GVAN G  PT        L++E  IFDF++ IYG+R TV +  +LRPE+KF  I+ 
Sbjct: 236 KLHRGVANVGVKPTFHDPARAELVIEVNIFDFNENIYGERVTVYWHHFLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M ED+ KA+ +L   +
Sbjct: 296 LVKQMNEDKAKAKHLLSIDF 315


>gi|325204796|gb|ADZ00250.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240355]
          Length = 306

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAALAG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGTFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|254521473|ref|ZP_05133528.1| riboflavin biosynthesis protein RibF [Stenotrophomonas sp. SKA14]
 gi|219719064|gb|EED37589.1| riboflavin biosynthesis protein RibF [Stenotrophomonas sp. SKA14]
          Length = 315

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 8/312 (2%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHP 59
            +F ++E  +  PN   G VV IG FDG+HLGH  ++  A+  A    +  ++  F P P
Sbjct: 3   RLFRSVEGGELFPN---GSVVCIGAFDGLHLGHRALVRHAVARARALGVAAVAVAFEPLP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R      +P   L+    + +IL ++G  A+   +F    A   AE+F++++LV  L  +
Sbjct: 60  REFFAQGTPPPRLTLARSKVEILRELGVDAIGLLRFDAAMAAMPAEEFVRRLLVHRLGAR 119

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G +F FG  R GD  +LQK G + GF    I+ + +   + +SS+ IR  L  G  
Sbjct: 120 EVWIGPEFCFGNRRRGDLALLQKMGAELGFSAGEIEAV-DLHGERISSTRIRQLLQDGDF 178

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  + I   V+ G ++GRTLGFPTAN++  P      G+YA          + 
Sbjct: 179 ARAGDLLGRPYAISGRVVRGRQLGRTLGFPTANLRF-PKTPALSGIYATWVHGVFDQPWP 237

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF D+  L   M 
Sbjct: 238 SVSSFGTRPTVDGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFNDLAALTDQMH 296

Query: 300 EDEKKARKILES 311
            D ++AR IL  
Sbjct: 297 RDAEQARAILSE 308


>gi|254519180|ref|ZP_05131236.1| riboflavin biosynthesis protein RibF [Clostridium sp. 7_2_43FAA]
 gi|226912929|gb|EEH98130.1| riboflavin biosynthesis protein RibF [Clostridium sp. 7_2_43FAA]
          Length = 307

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H GH  ++++ +      N    V ++  HP+T+++  S    +     + 
Sbjct: 18  VALGSFDGLHSGHLSLVKKTVQVAKEKNGKSMVFTYKNHPKTLVKPESAPKLIMDLETKL 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K LE+     ++   FT E  + SAE FI+ + V+   VK +I G  FRFG    GD  +
Sbjct: 78  KYLEEENVDIVVLRSFTKEFMSVSAEDFIKLLCVD-YNVKGIIVGFNFRFGYKNLGDVKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+    KYG+    ++    N    +SS+ IR ++ +G V  A+ +L   + I+  VIHG
Sbjct: 137 LEDLQGKYGYKLYVMEPYTYNGDV-ISSTRIRKSILEGDVKEASKMLSKPYLIKGKVIHG 195

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +K+GRT+GFPTAN++    I++ + GVY       ++T Y G+ + G NPT+     L +
Sbjct: 196 KKLGRTIGFPTANLEFDSKIIIPDKGVYYTNVEYNNKT-YKGITSVGYNPTVN-GQQLTI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E++I DF   IYGQ   V F + +R EIKF  +++L   + +DE  A+ 
Sbjct: 254 ETYILDFDDTIYGQELKVYFIERIREEIKFNSLDELVKQIKKDENFAKD 302


>gi|255029857|ref|ZP_05301808.1| hypothetical protein LmonL_13769 [Listeria monocytogenes LO28]
          Length = 288

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 98/287 (34%), Positives = 160/287 (55%), Gaps = 8/287 (2%)

Query: 29  GIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKM 85
           G+HLGH  +++QA +I         VL+F+PHP  ++ +    +  L+P   + + + K+
Sbjct: 3   GVHLGHQAVIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKL 62

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   +   +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +
Sbjct: 63  GVDIMYVVRFTTQFSELSPQAFVDNYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYAD 121

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
              F    +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT
Sbjct: 122 GR-FEVTIVDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRT 179

Query: 206 LGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +GFPTAN++++ D L  K GVYA++FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 180 IGFPTANIRVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 238

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F +EIYG+   + ++ + RPE+KF  +E L   + +DE+  R     
Sbjct: 239 FHREIYGEEAEIKWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAK 285


>gi|227495153|ref|ZP_03925469.1| possible FAD synthetase [Actinomyces coleocanis DSM 15436]
 gi|226831605|gb|EEH63988.1| possible FAD synthetase [Actinomyces coleocanis DSM 15436]
          Length = 326

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 146/315 (46%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++  +    +      G VV IGNFDG+H GH ++LE+  K+A         ++F+PH
Sbjct: 1   MQIWRGLSSVSA----GDGTVVTIGNFDGVHRGHQVVLEECRKMALELGVSSVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    +P+  ++  S +   LE  G       ++       +A +F+ ++LV+   V
Sbjct: 57  PLLVHCPQTPVELITSLSDRLIALENTGLDVTAVLEYVPSLYTLTASEFVTEILVKIFHV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G    FG  + G+  +L + G + GF    + +      +  SS+  R  L  G 
Sbjct: 117 KAVVLGQDAHFGAGKTGNVDLLNELGRELGFQVKVVADRLGESGRRWSSTWARELLATGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-T 236
           V  AA +LG   TI   V HG K GR LGFPTAN+  S   I+  +GVYA   +  D   
Sbjct: 177 VSGAAEILGAAHTIRGVVQHGFKRGRELGFPTANLDDSCSGIIPADGVYAGWLQLNDSAE 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                 + G NP         +E+ +      ++YG+   V F + LR    F  +++L 
Sbjct: 237 KLPAAISVGSNPQFA-GQKRTIETHVLGRSDLDLYGKTIVVHFVERLRGMQCFDSLDELL 295

Query: 296 IYMGEDEKKARKILE 310
           + M  D  KA +ILE
Sbjct: 296 LQMDADLLKASEILE 310


>gi|304436488|ref|ZP_07396462.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304370534|gb|EFM24185.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 323

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 105/321 (32%), Positives = 163/321 (50%), Gaps = 10/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H +       +  K  VVA+G FDG+H+GH  I+  A + A+  +    V SF  H
Sbjct: 5   MKTYHQL---VDFASKYKNIVVALGMFDGLHIGHQKIIRTASEQASRIHGTTFVFSFTNH 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRTI+ S      +S   +  +IL  +G   L+   FT + A+ S E+FI  +       
Sbjct: 62  PRTIVDSLGAPRRISSEQVSLRILRNLGVDVLVEIPFTHDFADTSPEEFIHLLY-RHFSP 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  + FGK  AG   +L   G++Y   T+    +  +  + +SS+ IRT + +G 
Sbjct: 121 RYIVVGENYTFGKKGAGTPQLLHDMGKRYTIETIVCSSVLYD-GEPISSTRIRTYIEQGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS 237
           + +   LLGY FT+   VIHG+  GR LGFPTAN+ L     +L  GVYA+         
Sbjct: 180 ITHVNELLGYPFTMIGTVIHGQARGRLLGFPTANIALRESYEILPNGVYAV-TVVYHHRI 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YS VAN G NPT        +E  I DF  ++YG++  VSF   +R E +F  +E L   
Sbjct: 239 YSAVANIGNNPTF-GLCDRRMEVHIMDFDGDLYGKKILVSFHKRIRSETRFDSVEALISQ 297

Query: 298 MGEDEKKARKILESSYPLSER 318
           +  D++ A  + + ++ L E+
Sbjct: 298 IKSDKECAECVFQETFHLQEK 318


>gi|260591392|ref|ZP_05856850.1| riboflavin biosynthesis protein RibF [Prevotella veroralis F0319]
 gi|260536758|gb|EEX19375.1| riboflavin biosynthesis protein RibF [Prevotella veroralis F0319]
          Length = 359

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 15/323 (4%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII 63
            I I Q     +   V  IG FDG+H GH  ++   I  A+       V++F+ HPR ++
Sbjct: 32  TIYIKQGEKVEMGELVATIGFFDGVHRGHQYLIRNVINEAHQVGMVSAVITFDEHPRQVL 91

Query: 64  QS--------SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           ++        +S    LS    +  +L K G   +I   F +  A+ SA +F++ VL   
Sbjct: 92  KASLGKEEDVNSRPELLSSLDEKLLLLSKTGIDKVIVLHFDVALADLSAREFMEDVLCNQ 151

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L V+ ++ G   RFG +R+      ++ GE+ G   +  +    +  + +SSS IRT + 
Sbjct: 152 LNVRKLLIGYDNRFGHNRSEGFDDYKRYGEQLGIEVIHNNAYLPD-GEKISSSRIRTYIK 210

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQ 233
           +G ++ A H LGY +TI S ++ G + G  LGFPTAN+ ++    +L   GVYA+  +  
Sbjct: 211 EGDIVRANHCLGYDYTISSKIVSGFQNGHKLGFPTANLDINACQQLLPMRGVYAVMVQLD 270

Query: 234 DQTSYS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               +  G+ N G+ PT        LE  IF+F   +YGQ  ++ F   +R E KF  +E
Sbjct: 271 HSLVWKRGMMNIGKRPTF-DGTKETLEVNIFNFEGNLYGQDISIRFISKIRDERKFDSLE 329

Query: 293 KLKIYMGEDEKKARKILESSYPL 315
            L   + +D+     + +  +P+
Sbjct: 330 ALSQQLEQDKHTINALFDRRHPM 352


>gi|153003538|ref|YP_001377863.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. Fw109-5]
 gi|152027111|gb|ABS24879.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. Fw109-5]
          Length = 322

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 16/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V  ++E  ++    L+G  VA+GNFDG+HLGH  ++   +A+     +   VL+F PH
Sbjct: 1   MDVHRSLEEARAA-GRLRGCAVAVGNFDGVHLGHQRLIALARALAHPRGAAAAVLTFEPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++ S     L+    + ++L   G  A++   F L  A   A  F+ + LV  L  
Sbjct: 60  PVRVLRPSLAPPLLATLPRKLELLAAAGADAVVLQPFDLPYAATPASAFVARDLVGGLGC 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F  G +RA     L+     +G     ++ +  +   +VSS+ +R  L +G+
Sbjct: 120 SDVVVGYDFTAGHERA-RVDALRPLLAAHGVRLHVVEPVTID-GLVVSSTKVREFLLEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--- 235
           V  AA LL     ++  V  G   GR  GF TAN+Q +  +L   GVYA+R     Q   
Sbjct: 178 VEAAALLLTRPHDVDGIVARGAGRGRGFGFATANVQTAA-LLPANGVYAVRAWLGGQPGP 236

Query: 236 ------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKF 288
                   + GV N G  PT+  N  L  E+ +FDF   ++YG+R  V+F   LR E +F
Sbjct: 237 QGLEGAALHEGVCNVGVKPTVEANAALTAEAHLFDFMGRDLYGERIRVAFVARLRDERRF 296

Query: 289 KDIEKLKIYMGEDEKKARKILESS 312
             ++ L+  + ED  +AR++L  +
Sbjct: 297 ASVDALRAQIAEDAARARELLAQA 320


>gi|328676513|gb|AEB27383.1| Riboflavin kinase / FMN adenylyltransferase [Francisella cf.
           novicida Fx1]
          Length = 306

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 173/314 (55%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IAN + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQTIIKKLLTIANENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+           +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPLRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|169342677|ref|ZP_02863718.1| riboflavin biosynthesis protein RibF [Clostridium perfringens C
           str. JGS1495]
 gi|169299183|gb|EDS81253.1| riboflavin biosynthesis protein RibF [Clostridium perfringens C
           str. JGS1495]
          Length = 309

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 90/293 (30%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I        L   
Sbjct: 14  KSTYIALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|319778237|ref|YP_004129150.1| Riboflavin kinase [Taylorella equigenitalis MCE9]
 gi|317108261|gb|ADU91007.1| Riboflavin kinase [Taylorella equigenitalis MCE9]
          Length = 321

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 102/317 (32%), Positives = 157/317 (49%), Gaps = 14/317 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHP 59
           H+  N+  N S         + +GNFDG+HLGH  IL+      I      +VL+F PHP
Sbjct: 9   HISRNLLSNSS-------TCLTVGNFDGVHLGHQSILKLVSQSAITKELVPSVLTFEPHP 61

Query: 60  RTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           R        +       +     +   L + G S +   +F   TA+   E FI  +LV+
Sbjct: 62  REYFGVTGNRPELIPTKIQGLRDKVLSLGRCGISEIYIQRFNKTTASMLPEDFITSILVK 121

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+VK++  G  FRFG  R GD  +L+   +K+GF   FID++ +      SSS +R AL
Sbjct: 122 GLKVKSLFVGADFRFGYKRKGDSEMLKSASKKFGFDVNFIDDILDTNQIRYSSSELRNAL 181

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G++  A+ ++G  +     VIHG+K+G  +G PT NM++     L+ G+Y +      
Sbjct: 182 AYGNISQASQIMGRNYHFTGRVIHGKKLGAKIGTPTMNMRVPQRFALRSGIYIVTVSGLS 241

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 VAN G  PT+  +G +LLE  I D     YG+   VSF D++R E KF  +E +
Sbjct: 242 AEPLQAVANLGIRPTVESSGEVLLEVHILDRIISAYGKIINVSFLDFIRDEEKFPSVEAM 301

Query: 295 KIYMGEDEKKARKILES 311
            I + +D +KA+   + 
Sbjct: 302 AIAIQKDIEKAKNYFKK 318


>gi|308176812|ref|YP_003916218.1| bifunctionnal riboflavin kinase/FAD synthetase [Arthrobacter
           arilaitensis Re117]
 gi|307744275|emb|CBT75247.1| bifunctionnal riboflavin kinase/FAD synthetase [Arthrobacter
           arilaitensis Re117]
          Length = 317

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 99/323 (30%), Positives = 167/323 (51%), Gaps = 15/323 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           MH +  ++   ++P  +   VV IGNFDG+HLGH  +L+ A+    A ++    ++F+PH
Sbjct: 1   MHYWKGLD---AVPADMAPTVVTIGNFDGVHLGHCEVLDAAVTQAKARSAQSVAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       +   + +   L  +G  A +   +TLE A+ SAE F++ ++VE L  
Sbjct: 58  PALVHRPDDAPELIMGIADRVDTLASVGLDATLMIHYTLEFADQSAEDFVRSIIVEKLNA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G   RFG   +GD   +Q+ G KYGF  + ++++     + +SS+ +R  L  G+
Sbjct: 118 VAVVVGHDVRFGHGNSGDFSYMQELGTKYGFDVIGVEDV--GDKRRLSSTWVREELAAGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  AA +LG    +  +V+HG   GR LGFPTAN+      I+  +GVYA     + +  
Sbjct: 176 VEAAAAILGRPHRMRGEVVHGHARGRELGFPTANLDPEATGIIPADGVYAGWVIDEAEVR 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDI 291
           +    + G NPT       ++E+ + D  +      ++YGQ+  V F  +LRP + ++ I
Sbjct: 236 WPAAISVGSNPTFEGV-KRVVEAHVIDRPEEGVEDFDLYGQQIVVEFISHLRPMVAYRGI 294

Query: 292 EKLKIYMGEDEKKARKILESSYP 314
           E L   M ED  +AR +L +   
Sbjct: 295 EALIEQMTEDVDQARAVLATERH 317


>gi|218131405|ref|ZP_03460209.1| hypothetical protein BACEGG_03021 [Bacteroides eggerthii DSM 20697]
 gi|217986337|gb|EEC52674.1| hypothetical protein BACEGG_03021 [Bacteroides eggerthii DSM 20697]
          Length = 308

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M +   I   + LPN     V  IG FDG+H GH  ++EQ  + A       +V++F  H
Sbjct: 1   MQLHTEISGKELLPN-----VATIGFFDGVHRGHRFLIEQVCEAAAVRGLASSVITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L+    +  +L   G    I   FT + A  SA+QF+  +  +  +V
Sbjct: 56  PRKVMHPDFHSELLTTCDEKTALLADTGIDYCIMLDFTPDLARLSAKQFMAVLKGD-YQV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+ D     + G++ G   +      NN+   VSSS IR  L +G 
Sbjct: 115 QALVIGYDHRFGHNRSEDFDDYVRYGQELGMEVILAQAYSNNE-MTVSSSAIRHLLLEGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AA+ LGY F +   V++G  +GR +GFPTAN+ +     ++  +GVYA+      + 
Sbjct: 174 VSEAANCLGYHFFLNGTVVNGYHVGRKIGFPTANLCVNDPEKLVPADGVYAV-NVFLGEA 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ + G  PT+       +E  IF F  +IY Q   +SF    R E+KF  IE+L  
Sbjct: 233 KHTGMLSIGYRPTLNNGLDRSIEVHIFHFDADIYDQPMRISFIRRTRSELKFDSIEELIE 292

Query: 297 YMGEDEKKARKILE 310
            + +DE +   IL 
Sbjct: 293 QLHKDEAEITAILS 306


>gi|121609068|ref|YP_996875.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Verminephrobacter eiseniae EF01-2]
 gi|121553708|gb|ABM57857.1| FMN adenylyltransferase / riboflavin kinase [Verminephrobacter
           eiseniae EF01-2]
          Length = 349

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 148/354 (41%), Gaps = 38/354 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +F         P       + IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGFH----HPGIAGACALTIGNFDGVHRGHQAMLALLNNEAAHRGVDSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE+ G    +   F    A  S E FI++VLV
Sbjct: 57  PRDYFAGVRHKPELAPARIGALRDKLTELERCGVQQTVVLPFDAALAAQSPEDFIEEVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L V+ V+ G  FRFG+ RAGD  +L   G+  GF    ++    +    VSSS +R A
Sbjct: 117 RGLGVRYVLVGDDFRFGRQRAGDYAMLDAAGQARGFDVARMNSYEVH-GLRVSSSAVRQA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G +  AA LLG  + I   V+HG K+GR L         GF T N++ S       G
Sbjct: 176 LAQGDMPAAARLLGRPYAISGHVVHGRKLGRELGAARAGAGNGFRTLNLRFSHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++ P     G +LLE+    +  ++     YG+   
Sbjct: 236 IFAVLVHGLGGAPLPGVANLGVRPSLDPQDVNGGRVLLETHCLQWPADLGLEGAYGKIVR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE--------RDRI 321
           V     L  E+K+  ++ L   + +D   AR    +    +         RDRI
Sbjct: 296 VELLHKLHDELKYDGLDALTAGIAKDCADARAWFAAGQAPAHTATRRPAARDRI 349


>gi|187931315|ref|YP_001891299.1| riboflavin kinase/FMN adenylyltransferase [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712224|gb|ACD30521.1| riboflavin kinase/FMN adenylyltransferase [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 306

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IA  + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + +  +   +  L N  +  +SSS+IR ALT  
Sbjct: 116 TKHIIVGDDFKFGKNRGGDYALLNQYSQTHDLNVDKVSTL-NLDNHRISSSDIRQALTNH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
            ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   
Sbjct: 175 DLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRTEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|319409843|emb|CBY90152.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase
           (flavokinase) and FMN adenylyltransferase (FAD
           pyrophosphorylase; FAD synthetase) [Neisseria
           meningitidis WUE 2594]
          Length = 318

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 20  HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAALAG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|150016090|ref|YP_001308344.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           beijerinckii NCIMB 8052]
 gi|149902555|gb|ABR33388.1| riboflavin biosynthesis protein RibF [Clostridium beijerinckii
           NCIMB 8052]
          Length = 311

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 96/289 (33%), Positives = 163/289 (56%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+H+GH  ++ + +++A  +     V +F  HPRT+I   + +  L     + 
Sbjct: 18  IALGSFDGLHIGHLSLINKVVEVAKKNKGRSMVFTFKNHPRTLINKENSVKLLMDNERKA 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           KILEK     +   +F LE    + ++FI+ ++V    +K  + G  ++FG    G+  +
Sbjct: 78  KILEKHKVDIVCFKEFDLEFMKMTPKEFIEFLIVN-YNIKGFVVGFNYKFGYKNLGNVEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   +YG+    +D  R   + +VSS+ IR A+  G V  A  +L   +T+  ++IHG
Sbjct: 137 LRELQNEYGYELYVMDP-RTYNNDVVSSTRIRKAIQDGEVSEANKMLSMPYTLSGEIIHG 195

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +KIGRT+GFPTAN++   + IL K GVY    +  +   Y G+ + G NPT+     L +
Sbjct: 196 KKIGRTIGFPTANLKYDENFILPKIGVYYTNVKVNNNI-YKGITSVGYNPTV-EGKNLTV 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E++I DF++EIYG +  VSF   +R E KF  +E+LK  +  D+  A+ 
Sbjct: 254 ETYILDFNKEIYGDKIDVSFIKKIRDEEKFNSLEELKDQLESDKAFAKN 302


>gi|329851140|ref|ZP_08265897.1| riboflavin biosynthesis protein RibF [Asticcacaulis biprosthecum
           C19]
 gi|328839986|gb|EGF89558.1| riboflavin biosynthesis protein RibF [Asticcacaulis biprosthecum
           C19]
          Length = 332

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 3/296 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G   AIG+FDG+H+GH  ++E AI       +  +V+ F+PHP++  +  S  F L   
Sbjct: 38  RGTAAAIGSFDGVHIGHQHVIESAIDAAARTGARSSVICFDPHPQSFFRPDSSPFRLMRV 97

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S Q +  E +G    +  +F    ++  A+ F + +L + L +     G  F+FGK   G
Sbjct: 98  SQQVRAFEALGVDYALIIRFDGNLSSLDADAFARVILRDHLALSHCSAGFDFQFGKRGGG 157

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L   GE++GF T  +    +   Q +SSS +R AL  G    A ++LG       +
Sbjct: 158 HAKDLVAFGEQFGFTTDILPLQTDQAGQKLSSSAVRDALLAGDARTAENILGRPQAYVGE 217

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           VIHG K GRT+ FPT N++L   +  + G+Y  + R  D    +GV+N G  PT+  N  
Sbjct: 218 VIHGAKQGRTIDFPTLNIRLGDYLRPRYGIYVTQTRLGDGRVVNGVSNIGVRPTVGGNIE 277

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+++FDF ++IYGQ       D++RPE KF   E++++ + +D   AR    +
Sbjct: 278 -LLETYLFDFKEDIYGQTVETLLRDFIRPEAKFDSFEEMRVQIQKDAGTARAWFSA 332


>gi|295693131|ref|YP_003601741.1| riboflavin kinase / fmn adenylyltransferase [Lactobacillus
           crispatus ST1]
 gi|295031237|emb|CBL50716.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           crispatus ST1]
          Length = 316

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 80/295 (27%), Positives = 150/295 (50%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ QA +I       + VL+F+ HP+ + +S      L     +
Sbjct: 25  VLALGFFDGVHLGHQRLINQAKEIALQKKLSLVVLTFDRHPKEVYESKRDFKYLETLEEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT   +  SA++F+  V+V  L   TV+ G  + +G     +  
Sbjct: 85  ANKMAELGVDYLAVLPFTKNFSQISAQEFVDNVIV-RLNADTVVAGFDYTYGPKNIANMA 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +  +  G   + +   +    + + S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 144 NLPQFSK--GRFNIVVMPKQTFNGRKIGSTEIRQAIKDGQMELATELMGHHYVMSGIIGH 201

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LG+PTAN+  +   ++ K GVYA + +      Y+ + + G N T+  +  + 
Sbjct: 202 GKRNGHKLGYPTANLIWAEHKVIPKIGVYATKTKVNG-KWYNSMTSVGYNVTINQDKKIY 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +ES IFDF++++YG+   + ++ Y R E KF  + +LK  +  DE++ R   +  
Sbjct: 261 IESNIFDFNEDVYGKPMKIKWYKYTRGEKKFAGLPELKEQLERDEQEIRAYFKQK 315


>gi|54112737|gb|AAV29002.1| NT02FT0623 [synthetic construct]
          Length = 306

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 171/313 (54%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  N+   +          +AIG+FDG+HLGH  I+++ + IA  + +   +L F P 
Sbjct: 1   MKIIPNLNKTKDF----LPKAIAIGSFDGVHLGHQAIIKKLLTIAKENNLVPYILFFEPL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+         F +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L  
Sbjct: 57  PKEFFLKDKAPFRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLNT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F+FGK+R GD  +L +  + + F+   +  L N  +  +SSS+IR ALT   
Sbjct: 117 KHIIVGDDFKFGKNRGGDYALLNQYSQTHDFNVDKVSTL-NLDNHRISSSDIRQALTNHD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           ++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    D   Y
Sbjct: 176 LIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDDVIFY 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ +
Sbjct: 235 -GVANAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRIEMKFNSFEELKLQI 292

Query: 299 GEDEKKARKILES 311
            +D + A+K++ +
Sbjct: 293 SKDIQTAKKLIST 305


>gi|325921002|ref|ZP_08182885.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas gardneri
           ATCC 19865]
 gi|325548509|gb|EGD19480.1| riboflavin kinase ;FMN adenylyltransferase [Xanthomonas gardneri
           ATCC 19865]
          Length = 334

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 5/285 (1%)

Query: 30  IHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +HLGH  +++ A++ A     P   +SF P PR     ++P   L+    + + L  +G 
Sbjct: 1   MHLGHRALMQHAVERARALGVPAVAVSFEPLPREFFAPAAPPPRLTLARAKIEGLYGLGA 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
            ++   +F    +  SAE F++  LV  L  K V  G +FRFG  R GD G+L+  GE+Y
Sbjct: 61  DSVGMIRFDGRLSAMSAEDFVRLALVGRLCAKEVWIGPEFRFGHRRGGDIGLLRALGEQY 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           GF    I  +   + + +S++ IR  L  G   +A  LLG  + I   V+ G+++GRTLG
Sbjct: 121 GFVAGEIAPVH-LRGERISATRIRELLGTGEFAHAGELLGRPYAIGGRVVRGKQLGRTLG 179

Query: 208 FPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ 267
           +PTAN++  P      G+YA       +  +  V++FG  PT+    P LLE+ +FDF  
Sbjct: 180 YPTANLRF-PRTPALSGIYATWVHGVAERPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQG 237

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           ++YG+   V F   LR E KF  ++ L + M  D ++AR +L++S
Sbjct: 238 DLYGRHIEVEFVAKLRDEEKFDGLDALTVQMHRDAEQARAVLKAS 282


>gi|323342020|ref|ZP_08082253.1| riboflavin biosynthesis protein RibF [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464445|gb|EFY09638.1| riboflavin biosynthesis protein RibF [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 312

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 108/295 (36%), Positives = 159/295 (53%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDG+H GH +++ +A KI    N    +++F+P P T+I + S +  L+P   +
Sbjct: 20  AACIGYFDGLHRGHQILINEAKKIGQEFNYETALITFDPDPWTVIHNKSHVKHLTPIKEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I E +G   LI  +FT + +  S  +FI+K+LV  L VKT+I G  ++FG    G   
Sbjct: 80  VRIAESLGIDYLITIEFTKDLSKLSPLEFIEKILVP-LNVKTLICGADYKFGYRGEGSVD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+  G  Y F T  +  L +   Q + ++ I  A+  G V  A  LLG  ++I   V+ 
Sbjct: 139 DLEALGHYY-FDTHVV-PLDHVNEQKIGTTAITQAILNGDVQQANDLLGRLYSISGFVVG 196

Query: 199 GEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+  GR +GFPTANM +    ++ K+GVYA     +  T Y  V N G NPT      L 
Sbjct: 197 GQHRGREIGFPTANMDVVDEYVIPKQGVYAGFVEVKG-TMYQSVINIGHNPTFNTTEHLS 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           LE++I DF ++IYG+    SF   LR E+KF  IE L   M  D K+AR IL+ +
Sbjct: 256 LETYILDFDEDIYGEVIKQSFVKRLRDELKFDSIETLVEQMHRDVKEARLILDET 310


>gi|326797984|ref|YP_004315803.1| riboflavin biosynthesis protein RibF [Sphingobacterium sp. 21]
 gi|326548748|gb|ADZ77133.1| riboflavin biosynthesis protein RibF [Sphingobacterium sp. 21]
          Length = 323

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 25/329 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ NIE    L N     VV IG FDG+H+GH  I+    + A   N    +L+F PH
Sbjct: 1   MKIYRNIEDFIPLDN----AVVTIGTFDGVHIGHQKIISSLREYAQKINGETVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR I+        L +    +   L + G   LI   FT + +N SAE++I+++LV  + 
Sbjct: 57  PRMILHPDDDSLRLINTIEEKADRLAESGIDHLIITPFTRDFSNQSAEEYIREILVSKIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G    FGKDR G    L K  E+Y +    I E ++     VSS+ IR AL  G
Sbjct: 117 TKRIIIGYDHHFGKDRKGSLVDLLKYAEQYHYSVQEIPE-QDINDVAVSSTKIREALIIG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            +  A   LGY F I   V+ G+++GRT+G+PTAN+++     ++   G+YA++    + 
Sbjct: 176 EIATANKYLGYPFHITGKVVKGQQLGRTIGYPTANIEVPESYKLIPAYGIYAVQATLIEH 235

Query: 236 T--------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
                          +  G+   G  PT+       +E   FD ++++YG+   + F  +
Sbjct: 236 AEMTTGEYIPAKKGPTLKGMGYIGTRPTVRGVN-RSIEINFFDLNEDLYGKTLQIQFLHF 294

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +R + KF  IE +   + EDEKK +++L 
Sbjct: 295 VRHDHKFDSIEAMTAQLAEDEKKIKELLA 323


>gi|254671608|emb|CBA09293.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha153]
          Length = 318

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+ V+ F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|304388368|ref|ZP_07370479.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis ATCC
           13091]
 gi|304337634|gb|EFM03792.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis ATCC
           13091]
          Length = 306

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAALAG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPDHRYALGGVFVVDADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 301 EAARRW 306


>gi|296394404|ref|YP_003659288.1| riboflavin biosynthesis protein RibF [Segniliparus rotundus DSM
           44985]
 gi|296181551|gb|ADG98457.1| riboflavin biosynthesis protein RibF [Segniliparus rotundus DSM
           44985]
          Length = 323

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 23/328 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  +  IE    +P      V+ IG FDG+H GH  ++ + +        P  +++F+PH
Sbjct: 1   MRHWRGIE---DIPPDWGRCVLTIGTFDGVHRGHVELVRRTVNEARKRRLPSALITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I++      L+  + + +++ ++G        FT E A  SAE+F+ ++LV  L V
Sbjct: 58  PAQVIRAGDHPAQLTTLARRAELVGQLGIDVFCVIPFTRELAKQSAEEFVHELLVSRLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG    G+  +L + G+++GF    +  L       VSS+ IR+ +  G 
Sbjct: 118 AKVLVGENFTFGHRATGNIDMLVELGKRFGFEAESV-RLFAEHDVTVSSTYIRSVVAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ-- 235
           V  AA  LG    +E  V+HG+  GR LGFPTAN+       +  +GVYA  F       
Sbjct: 177 VAAAAEALGRPHRVEGVVVHGDGRGRELGFPTANVAPPMYAAIPADGVYAAWFSISSPAR 236

Query: 236 -------------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
                           +   + G NPT        +E+++ D   ++YGQ   V F   L
Sbjct: 237 PSAPGSKQNRASLGRVAAAVSVGTNPTF-SGRERTVEAYVLDKDVDLYGQYVAVDFVRRL 295

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           R    F+  E+L   + +D +  RK L+
Sbjct: 296 RDMWAFQSREELIDAIAKDVEDTRKALQ 323


>gi|120612102|ref|YP_971780.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Acidovorax
           citrulli AAC00-1]
 gi|120590566|gb|ABM34006.1| FMN adenylyltransferase [Acidovorax citrulli AAC00-1]
          Length = 349

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 145/354 (40%), Gaps = 38/354 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F  +      P       V IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGLH----HPGIAPACAVTIGNFDGVHRGHQAMLALLASEAAHRGVESCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     + + L + G    +   F    A    + FI  VLV
Sbjct: 57  PRDYFAGALRRPELAPARIGTLRDKLEELARCGVQQAVVLPFNERLARQPPQAFIDDVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  + V+ G  FRFG  RAGD  +L   G + GF    ++    +    VSSS +R A
Sbjct: 117 RGLGARYVLVGDDFRFGAQRAGDYAMLDAAGRERGFDVARMNSYEVH-GLRVSSSAVRDA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G++  AA LLG  + I   V+HG K+GR L         GF T N++ +       G
Sbjct: 176 LARGNMGAAAALLGRPYAISGHVVHGRKLGRALGASAEGAGDGFRTLNLRFAHWKPAAGG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++ PN    G +LLE+    +   +     YG+   
Sbjct: 236 IFAVLVHGLCDAPLPGVANLGVRPSLDPNDVNGGRVLLETHCLQWPAHLGPEGAYGKIVR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS--------ERDRI 321
           V     L  E+K+   + L   +  D + AR    S+   S         RDRI
Sbjct: 296 VELLHKLHDELKYDSFDALTAGIARDCEDARAYFASTPAASYTETRRQTTRDRI 349


>gi|309378323|emb|CBX23069.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 306

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFASRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGVFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIAADM 300

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 301 EAARRW 306


>gi|172040536|ref|YP_001800251.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium urealyticum DSM 7109]
 gi|171851840|emb|CAQ04816.1| riboflavin kinase / FMN adenylyltransferase [Corynebacterium
           urealyticum DSM 7109]
          Length = 342

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 28/328 (8%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPR 60
           +++ ++    +P++L+G  V IG FDG+H GH  ++ +A+  A     P  + +F+PHP 
Sbjct: 16  IWYGLD---RVPHNLEGAAVTIGVFDGVHRGHQELINRAVAKAKELGVPAVMFTFDPHPT 72

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            + Q  S    L     + ++   +G   ++   FT E A++S E++I + L++ L  K 
Sbjct: 73  VVFQPESVPKLLGTVEERAQLAMDLGIDHVVVQAFTPEIASWSPEEYIDRALLDTLRAKH 132

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG   +G    L++  +   F    +  L +  +  V S+ IR  + +G + 
Sbjct: 133 VVVGENFTFGHKASGTPDTLREVSQNRDFTVDVV-PLLSEDNHTVCSTWIRQRIAEGDMT 191

Query: 181 NAAHLLGYRFTIESDVIH-GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT-- 236
            AA  LG  F++E  V H   + GR LGFPTAN+       L  +GVYA           
Sbjct: 192 AAAEALGRPFSVEGVVTHGAGRGGRALGFPTANLYFPDIYALPSDGVYAGYLEILPNQAE 251

Query: 237 -----------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
                                  + G NPT   + P  +ESF+ D   ++Y     VSF 
Sbjct: 252 LSHQRLSDKVGTMPVGAKLPAAISVGTNPTF-GHEPRSVESFVLDHEADLYDFEVRVSFV 310

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             +R + K+  +++L   +  D    RK
Sbjct: 311 SRIRGQEKYDSLDELIAAIDRDVAATRK 338


>gi|238926816|ref|ZP_04658576.1| possible FAD synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885348|gb|EEQ48986.1| possible FAD synthetase [Selenomonas flueggei ATCC 43531]
          Length = 323

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/321 (32%), Positives = 163/321 (50%), Gaps = 10/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M  +H +       +  K  VVA+G FDG+H+GH  I+  A + AN  +    V SF  H
Sbjct: 5   MKTYHQL---VDFASKYKNIVVALGMFDGLHIGHQKIIRTAAEQANRIHGTTFVFSFTNH 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR I+ S      +S   +  +IL  +G   L+   FT   A+ S E+FI  +   +   
Sbjct: 62  PRAIVDSLGAPRRISSEQVSRRILRNLGVDVLVEIPFTPAFADTSPEEFIHLLY-RYFSP 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  + FG+   G   +L+  G +Y   T+    +  +    +SS+ IRT + +G 
Sbjct: 121 QYVVVGENYTFGRKGVGTPQLLRGIGRRYTIETIVCASVLYDN-VPISSTRIRTYIEQGD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           + +   LLGY FT+   VIHG+  GR LGFPTAN+ L     +L  GVYA+     +   
Sbjct: 180 ITHVNELLGYPFTMIGTVIHGQARGRLLGFPTANIALFEFYEILPNGVYAVTVLYHNHI- 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YS VAN G NPT       + E  I DF  ++YG++  VSF   +R E +F  +++L   
Sbjct: 239 YSAVANIGNNPTFGSCDRRM-EVHIMDFDGDLYGKKILVSFHKRIRSERRFDSVDELISQ 297

Query: 298 MGEDEKKARKILESSYPLSER 318
           +  D++ A + L+ ++ L E+
Sbjct: 298 IKSDKECAERALQETFHLQEK 318


>gi|319792057|ref|YP_004153697.1| riboflavin biosynthesis protein ribf [Variovorax paradoxus EPS]
 gi|315594520|gb|ADU35586.1| riboflavin biosynthesis protein RibF [Variovorax paradoxus EPS]
          Length = 349

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/354 (29%), Positives = 151/354 (42%), Gaps = 38/354 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M VF         P       + IGNFDG+H GH  +L   Q        P  VL+F PH
Sbjct: 1   MQVFRGFR----HPGVAPACALTIGNFDGVHRGHQAMLALLQTEARQRGLPSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L   G +  I   F    A+ S E FIQ VLV
Sbjct: 57  PRDYFAALTKKPDLAPARIGTLRDKLSELAACGVAQTIVLPFDGRLASQSPEDFIQNVLV 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  + V+ G  FRFG  RAGD  +L   G+  GF    ++    +    VSSS +R A
Sbjct: 117 DGLRARYVLVGDDFRFGAKRAGDYAMLDAAGDARGFDVARMNSYEVH-GLRVSSSAVREA 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G + +A  LLG  +TI   V+HG K+GR L         GF T N++         G
Sbjct: 176 LAEGRMADAQTLLGRPYTISGHVVHGRKLGRALGASAPGQDDGFRTLNLRFKHWKPAASG 235

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVPN----GPLLLESFIFDFSQEI-----YGQRCT 275
           ++A+           GVAN G  P++  N    G +LLE+   ++   +     YG+   
Sbjct: 236 IFAVLVHGLADKPLPGVANLGVRPSLDANDVNAGRVLLETHCLEWPSHLGSEGAYGKIVR 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP--------LSERDRI 321
           V     L  E+++  +E L   + +D + AR    S++          + RDRI
Sbjct: 296 VELLHKLHDELRYTSLEALTAGIAKDGRDARAFFASTHAQHHAEVHRQTTRDRI 349


>gi|313669054|ref|YP_004049338.1| riboflavin kinase/FMN adenylyltransferase [Neisseria lactamica
           ST-640]
 gi|313006516|emb|CBN87980.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           lactamica 020-06]
          Length = 306

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFASRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTIDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 301 EAARRW 306


>gi|161869381|ref|YP_001598548.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis 053442]
 gi|161594934|gb|ABX72594.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           053442]
          Length = 318

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+ V+ F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|314936567|ref|ZP_07843914.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655186|gb|EFS18931.1| riboflavin biosynthesis protein RibF [Staphylococcus hominis subsp.
           hominis C80]
          Length = 323

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 170/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+  Q +   +    +A G FDG+H GH  + E         N    V +F+PH
Sbjct: 4   IEITHPIQNEQLIKEDV---AMAFGFFDGMHRGHSKVFEALDIRAKEKNLKKAVTTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E       I   F+   AN +AE+FI+  ++    
Sbjct: 61  PSVVLNPERKRTDYLTPLSDKLEMIEHHDIDYCIVINFSSRFANVTAEEFIKDYIINN-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F FGK   G+  +L +  E   F+T  + +L +  S+ +S+++IR AL +G
Sbjct: 120 VKEVVAGFDFTFGKFGKGNMAVLNEIDE---FNTTIVGKL-DLDSEKISTTSIRQALHEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLQKANDELGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSIEIGAEH 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  YLRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFEENIYGERVIVYWHHYLRPEVKFDGIDA 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+++A+ +L   +
Sbjct: 296 LVSQMNDDKERAKYLLAVDF 315


>gi|251797393|ref|YP_003012124.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. JDR-2]
 gi|247545019|gb|ACT02038.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. JDR-2]
          Length = 315

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 105/316 (33%), Positives = 166/316 (52%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFN 56
           M +          P  LK     VAIG+FDG+H GH  ++ QA++IA  +     V++F 
Sbjct: 1   MEIISLTYPLTEYPALLKNKKLAVAIGHFDGVHRGHRNVITQAVQIAKETGALSAVMTFL 60

Query: 57  PHPRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP+ ++ Q       L+PP  ++ +  ++G   ++  KF L  A  S +QF+++V +  
Sbjct: 61  PHPKEVLGQGDQYFSCLTPPEEKQALFAELGVDIMLVVKFDLTFAAISPQQFVEEV-LRP 119

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  + VI G  F FG    G+  +++            ++ L  N  + VSS+ IR AL 
Sbjct: 120 LHAEHVIVGFDFTFGAKGKGNPEMMRTLSSP-DITVDIVEPLYEN-GEKVSSTYIRAALE 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQD 234
           KG +  A  LLG  + ++  V+HG+  GRT+GFPTAN+ L  P +    GV+AI+     
Sbjct: 178 KGDIALATTLLGRPYEVDGIVVHGDARGRTIGFPTANVGLSKPYVTPCLGVFAIKAMVAG 237

Query: 235 QTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +T Y GV N G  PT        +LE+ +FDF QEIYG+  T+ F  ++R E +F  + +
Sbjct: 238 KTYY-GVLNHGMKPTFNKEEIRPVLEAHLFDFHQEIYGEPITLEFHSFIRAEKRFGSVHE 296

Query: 294 LKIYMGEDEKKARKIL 309
           L   +GED K+ ++  
Sbjct: 297 LIEQIGEDAKQTKQFF 312


>gi|70726642|ref|YP_253556.1| riboflavin kinase / FAD synthase ribC [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447366|dbj|BAE04950.1| riboflavin kinase / FAD synthase ribC [Staphylococcus haemolyticus
           JCSC1435]
          Length = 323

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 171/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+ +Q +   +    +A G FDG+H GHH + E       A N    V +F+PH
Sbjct: 4   IEVTHPIQEDQLIKEDV---AMAFGFFDGMHRGHHKVFEALDERAAAQNLKKAVTTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + +++E+      I   F+   A+ +AE+F+Q  ++    
Sbjct: 61  PSVVLNPERKRTDYLTPLSDKLEMIEQHDVDYCIVINFSSRFASVTAEEFVQDYIINN-R 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F +GK   G+  +L +  E   F T  + + +  +++ +S++ IR AL +G
Sbjct: 120 VKEVIAGFDFTYGKFGKGNMSVLNEMDE---FSTTIVGK-QEMETEKISTTAIREALKEG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
           ++  A   LGY + I+  V+ GEK GRT+GFPTAN+Q     +L K+GVYA+      + 
Sbjct: 176 NLKKANEQLGYLYRIKGTVVQGEKRGRTIGFPTANVQPSDDYVLPKKGVYAVSMAIGAEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF+  IYG+R  V +  YLRPE+KF  I+ 
Sbjct: 236 KIYRGVANVGVKPTFHDPSKAEVVIEVNIFDFNDNIYGERVIVYWHHYLRPEVKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M  D++KA+ +L   +
Sbjct: 296 LVEQMNNDKEKAKYLLSVDF 315


>gi|116329029|ref|YP_798749.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116330362|ref|YP_800080.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121773|gb|ABJ79816.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124051|gb|ABJ75322.1| Bifunctional riboflavin kinase/FMN adenylyltransferase [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 319

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 171/316 (54%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M     IE  QS        VV +GNFDGIHLGH  +L++ ++++        V++++P+
Sbjct: 1   MITISTIE--QSGKTIHSPCVVTLGNFDGIHLGHQALLDRVLQVSQKTGLASCVVTYDPN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++     +  L   + +E+ + + G   L+   F  E A  SAE F++++L++ L+ 
Sbjct: 59  PAVVLGKKPEMKNLMTFADKEEWIRQKGIDFLVVLSFNKELAEMSAESFLEEILLKQLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FGK+R G+  +L++  EK  +    +D +   K   +SSS +R  +++G+
Sbjct: 119 KNIIIGFNHCFGKERRGNYELLKEYSEKLKYSVEKMDPVF-LKEIKLSSSYVRRLISEGN 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V  AAH L   +++   V+ G K GR +GFPTAN+Q   +  +L   GVYA         
Sbjct: 178 VKEAAHCLNRFYSVSGTVVGGHKRGRKIGFPTANVQPTNADILLPGIGVYAGFTTVAGIE 237

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            YS + N G NPT   N  + LES IFDF + IY +   ++F + +R EI+F  +E L  
Sbjct: 238 -YSSMINIGHNPTFGENA-ITLESNIFDFQKNIYDEGIKIAFAEKIRNEIQFSSVENLIA 295

Query: 297 YMGEDEKKARKILESS 312
            + +DE  AR IL+++
Sbjct: 296 QLKQDEISARNILKTT 311


>gi|163783125|ref|ZP_02178120.1| riboflavin kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881805|gb|EDP75314.1| riboflavin kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 315

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 9/293 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   + +GNFDG+HLGH  ++    + A    +   V++F PHP  ++     +  LS  
Sbjct: 25  EETALIVGNFDGVHLGHRYLVSTLKERARERGLKTMVVTFCPHPLKVLAPRLFLCELSTA 84

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L       L   +F  E +  SA+ F+++++   L  + ++ G  +RFG  R G
Sbjct: 85  EEKMELLRG-DIDYLCFIRFDREFSQMSAKDFLEEIIHRRLGCRYLLVGYDWRFGYRREG 143

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  + ++ GEK GF        + N   IVSS+ +R  L +  +  A   LG R+ I   
Sbjct: 144 EIELAREIGEKLGFEVELATPFKKN-GHIVSSTLVRRLLGEARLREAEEFLGRRYWIRRR 202

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+  G  +GFPTAN++ + ++ LKEGVYA+            VAN G  PT      
Sbjct: 203 VVKGDGRGSRIGFPTANLKDTENLCLKEGVYAVLV----DDRLPAVANLGYRPTF-DGKK 257

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +LE  I  FS ++ G+   V F ++LR E KF  +E+LK  + +D + A  +
Sbjct: 258 KVLEVHIPGFSGDLKGKSIKVDFVEFLREERKFSGVEELKAQIEKDIQSALAV 310


>gi|237709386|ref|ZP_04539867.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456442|gb|EEO62163.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 306

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++A+   +   +++F  H
Sbjct: 1   MEIISDIN-HQALP----PSVATIGFFDGVHRGHRFLINQVKEVADKDGLYSALVTFPMH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P  + ++LE       +   FT + +  SA +F+Q +      +
Sbjct: 56  PRQVIQTTYHPQLLSSPKEKLELLETTQIDYCLLLPFTQKLSLLSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+       + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSESFEDYCRYGEELNIYIVRARAYTDGEDK-ISSSVIRQLLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +   
Sbjct: 174 VSQAAQFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-K 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            + G+ N G  PT+     + +E  I +FS++IY +   + F  YLRPE K+  I++L  
Sbjct: 233 KWVGMLNIGHRPTINNGNNVSIEVNILNFSEDIYHKEMRIEFVKYLRPEEKYGTIDELIA 292

Query: 297 YMGEDEKKARKIL 309
            M +D ++  KIL
Sbjct: 293 QMHKDREETAKIL 305


>gi|255533430|ref|YP_003093802.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
           2366]
 gi|255346414|gb|ACU05740.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
           2366]
          Length = 311

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 111/316 (35%), Positives = 174/316 (55%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+++H+    + L N     V  IG FDG+H GH  I+++  ++A        +L+F PH
Sbjct: 1   MNIYHHFSEFKRLNN----AVATIGTFDGVHYGHQKIIKRLCELARATGGESVILTFFPH 56

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR II      +  ++    + KIL  +G   LI   FT + +N SAE++I+ +LV+ + 
Sbjct: 57  PRLIIDPENQDLKMINTIDEKAKILAALGVDHLIITPFTRDFSNLSAEEYIKNILVDTIG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K +I G   RFGKDR G    L      Y +    I E ++     VSS+ +R AL  G
Sbjct: 117 IKNLIVGYDHRFGKDRKGGMPELLALARTYSYQIEVIPE-QDINDVAVSSTKVRNALLNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQ 235
            V  AA  LGY F++   VI G+KIGRT+GFPTAN+ +     ++  +G+YA+    ++Q
Sbjct: 176 QVALAAEYLGYNFSLHGRVIKGDKIGRTIGFPTANIFIEETYKLIPSDGIYAVTVDMEEQ 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            S+ G+A  G+ PT+       +E  IFDF +EIYGQ  T++F  +LR ++KF  +E LK
Sbjct: 236 -SFRGMAYIGQRPTIN-GMTRNIEVNIFDFDREIYGQDITMTFLQFLRHDVKFTGLEALK 293

Query: 296 IYMGEDEKKARKILES 311
           I + +D++       +
Sbjct: 294 IQLQKDKEDTLAYFAT 309


>gi|227878813|ref|ZP_03996720.1| FAD synthetase [Lactobacillus crispatus JV-V01]
 gi|256843335|ref|ZP_05548823.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           125-2-CHN]
 gi|256849846|ref|ZP_05555277.1| riboflavin kinase [Lactobacillus crispatus MV-1A-US]
 gi|262046908|ref|ZP_06019868.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           MV-3A-US]
 gi|293381220|ref|ZP_06627228.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           214-1]
 gi|312978237|ref|ZP_07789981.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           CTV-05]
 gi|227861561|gb|EEJ69173.1| FAD synthetase [Lactobacillus crispatus JV-V01]
 gi|256614755|gb|EEU19956.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           125-2-CHN]
 gi|256713335|gb|EEU28325.1| riboflavin kinase [Lactobacillus crispatus MV-1A-US]
 gi|260572890|gb|EEX29450.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           MV-3A-US]
 gi|290922260|gb|EFD99254.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           214-1]
 gi|310894955|gb|EFQ44025.1| riboflavin biosynthesis protein RibF [Lactobacillus crispatus
           CTV-05]
          Length = 316

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 80/295 (27%), Positives = 150/295 (50%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++ QA +I       + VL+F+ HP+ + +S      L     +
Sbjct: 25  VLALGFFDGVHLGHQRLINQAKEIALQKKLSLVVLTFDRHPKEVYESKRDFKYLETLEEK 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              + ++G   L    FT   +  SA++F+  V+V  L   TV+ G  + +G     +  
Sbjct: 85  ANKMAELGVDYLAVLPFTKNFSQISAQEFVDNVIV-RLNADTVVAGFDYTYGSKNIANMA 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +  +  G   + +   +    + + S+ IR A+  G +  A  L+G+ + +   + H
Sbjct: 144 NLPQFSK--GRFNIVVMPKQTFNGRKIGSTEIRQAIKDGQMKLATELMGHHYVMSGIIGH 201

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LG+PTAN+  +   ++ K GVYA + +      Y+ + + G N T+  +  + 
Sbjct: 202 GKRNGHKLGYPTANLIWAEHKVIPKIGVYATKTKVNG-KWYNSMTSVGYNVTINQDKKIY 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +ES IFDF++++YG+   + ++ Y R E KF  + +LK  +  DE++ R   +  
Sbjct: 261 IESNIFDFNEDVYGKPMKIKWYKYTRGEKKFAGLPELKEQLERDEQEIRAYFKQK 315


>gi|182417567|ref|ZP_02948892.1| riboflavin biosynthesis protein RibF [Clostridium butyricum 5521]
 gi|237667189|ref|ZP_04527173.1| riboflavin biosynthesis protein RibF [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378580|gb|EDT76108.1| riboflavin biosynthesis protein RibF [Clostridium butyricum 5521]
 gi|237655537|gb|EEP53093.1| riboflavin biosynthesis protein RibF [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 311

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 88/287 (30%), Positives = 157/287 (54%), Gaps = 7/287 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +A+G+FDG+HLGH  ++ +  + A  +     V +F  HPR ++        L   + + 
Sbjct: 18  IALGSFDGLHLGHLSLIHKVHEEAKKNGGRSIVYTFKNHPRALLNKDDAPKLLMDNNEKA 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + LEK G   L   +F  E    + ++FI+ + +    +K +I G  ++FG    GD  +
Sbjct: 78  EFLEKCGVDILYFQEFNKEFMEMTPKEFIEFL-INRFNIKGLIVGFNYKFGYKNMGDTEL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  ++Y F    ++  + +  +++SS+ IR ++  G +  A  +LG+ F +  +V+HG
Sbjct: 137 LKELQKEYNFKLFIMEPCKYD-GKVISSTRIRNSVEDGKIYEAYKMLGHPFRLSGEVMHG 195

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            KIGRT+GFPTAN++   + IL   GVY    +  +   Y G+ + G NPT+     L +
Sbjct: 196 RKIGRTIGFPTANLKYDKNFILPAVGVYYTNVKVNNSI-YKGITSVGNNPTV-EGKTLTI 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           E++I DF+++IYG+   V F   +R E KF  +E+LK  + +D+  A
Sbjct: 254 ETYILDFNKDIYGENIEVFFIKKIRNEKKFNGVEQLKNQLEKDKSFA 300


>gi|261878994|ref|ZP_06005421.1| riboflavin biosynthesis protein RibF [Prevotella bergensis DSM
           17361]
 gi|270334379|gb|EFA45165.1| riboflavin biosynthesis protein RibF [Prevotella bergensis DSM
           17361]
          Length = 316

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 7/310 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I  NQ    ++   V  IG FDG+HLGH  ++E     A        V++F+ HPR ++ 
Sbjct: 4   INFNQDHIANINPCVATIGFFDGVHLGHRFLIEHVRDEAQLMGLSSMVITFDHHPREVLN 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L+    + ++LE  G   ++   F  + +  SA++F+  VL + L V+ +I G
Sbjct: 64  QDYQPELLTTLDAKLQLLENTGVDHVVVLHFDEKMSQLSAQEFMNHVLHDRLHVRKLIIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG +RA       + GE+ G        L+ +  + +SSS +R  L  G +  A  
Sbjct: 124 YDNRFGHNRAETCEDYVRYGEELGIAVAHHSALKMDGLE-LSSSVVRAFLKGGEIELANR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTS-YSGV 241
            LGY ++I   V+HG K GR +G+PTAN+ L  S  ++  +GVYA+R +          +
Sbjct: 183 CLGYPYSIVGKVVHGFKKGRGIGYPTANLDLSDSHQLVPSDGVYAVRVQIGASGQSLPAM 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              G  PT        LE+ IF+F ++IYGQ+  ++F   +R E +F  + +L   + ED
Sbjct: 243 TGIGLRPTF-GGTERTLETHIFNFHEDIYGQQLRLTFVKRIRAEQRFDHVTQLVNQLKED 301

Query: 302 EKKARKILES 311
           EK   K+   
Sbjct: 302 EKMIEKLFNK 311


>gi|315038570|ref|YP_004032138.1| riboflavin kinase [Lactobacillus amylovorus GRL 1112]
 gi|312276703|gb|ADQ59343.1| riboflavin kinase [Lactobacillus amylovorus GRL 1112]
          Length = 309

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M + H   +   +  ++     V+A+G FDG+HLGH  ++++A +I    N P+ V++F+
Sbjct: 1   MKIVH---LTYPVKENILSSKVVLALGFFDGVHLGHQKLIKRAKEIADQKNLPLVVMTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ + +       L     +   + ++G   L    FT E +   A+ F+  V+V  L
Sbjct: 58  RHPKEVYEDKKNFKYLETLEEKADKMSELGVDYLAVMPFTKEFSQIGAQDFVDNVIV-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              T++ G  + +G     +   L    +  G   + +   +    + + S+ IR A+  
Sbjct: 117 NADTIVAGFDYTYGPKEIANMDRLSDYAK--GRFDIVVMPKQIFAGKKIGSTEIRQAIKD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQ 235
           G +  A  L+G+ + +   + HG++ G  LGFPTAN+      ++ K GVYA +    D 
Sbjct: 175 GDMELAYELMGHHYVMSGIIGHGKRNGHKLGFPTANLIWADHKVIPKIGVYATKTEI-DG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T+     + +ES +F+F +++YG+   + ++ Y R EIKF  +++LK
Sbjct: 234 KWYDSMTSVGYNVTIGQEKKIYIESNLFNFDEDVYGKPMKIKWYKYTRGEIKFAKLDELK 293

Query: 296 IYMGEDEKKARKILES 311
             + +D+++ +     
Sbjct: 294 KQLEKDQEEIKAYFAE 309


>gi|253700251|ref|YP_003021440.1| riboflavin biosynthesis protein RibF [Geobacter sp. M21]
 gi|251775101|gb|ACT17682.1| riboflavin biosynthesis protein RibF [Geobacter sp. M21]
          Length = 323

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 109/321 (33%), Positives = 172/321 (53%), Gaps = 8/321 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +F +I     +   L+   V IGNFDG+HLGH  I  +  + A        V++F PH
Sbjct: 1   MVIFRSI---SDITEKLRHPAVTIGNFDGVHLGHREIFRRVRERAAELGGVSVVVTFVPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++ S   I  ++    +E ++E  G   L+   F  E A   A  F+QKVLV+ + V
Sbjct: 58  PLKVVGSHKEIRLITTRREKEFLIESAGIDYLLEIPFDREFAAVPAADFVQKVLVDAIGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           ++++ G  + FG+ R G+  +L+  GE+YG+    +D + +N + + SS+ +R  +T G 
Sbjct: 118 ESLVIGYDYAFGRGREGNVQLLRGMGERYGYSVEVLDPI-SNGATVYSSTKVRDMVTTGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     +LG  + I   V+HG + GR LGFPTAN+ +  D+L   GVYA++         
Sbjct: 177 VEGVVGVLGRHYAITGTVVHGHQRGRGLGFPTANLAMEKDLLPAAGVYAVK-VCLGHELL 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G  N G NPT   NG L LE F+FD  +++YG+  TV F   LR E +F++++ LK  +
Sbjct: 236 DGACNIGTNPTF-GNGALSLEVFLFDLDRDLYGREVTVFFIARLREERRFEELQALKEQI 294

Query: 299 GEDEKKARKILESSYPLSERD 319
             D  + R IL+ + P+   D
Sbjct: 295 ALDVARCRGILQDAEPVGAGD 315


>gi|302874667|ref|YP_003843300.1| riboflavin biosynthesis protein RibF [Clostridium cellulovorans
           743B]
 gi|307690719|ref|ZP_07633165.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           cellulovorans 743B]
 gi|302577524|gb|ADL51536.1| riboflavin biosynthesis protein RibF [Clostridium cellulovorans
           743B]
          Length = 308

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 7/292 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
             + +G+FDG+H+GH  +++  +     NN    V +F+ HP +I+        L     
Sbjct: 16  TYITLGSFDGLHMGHQQLIKSTVSKARENNIKSMVYTFSNHPLSILAPDKEPKQLMVNEK 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +IL+K+    +    F  E        FI+ +LV+   +K ++ G   RFG    GD 
Sbjct: 76  KIEILKKLEVDIVNFAHFNEEYLKIQPVAFIE-LLVKKYNMKGIVVGYNNRFGYKNQGDV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+    +YG+  + ID ++ +   IVSS+ IR  +T+G V  A+ LLG  +++E  V+
Sbjct: 135 ELLKAYSNEYGYEVIVIDPVKEHD-TIVSSTKIRAFITEGEVEKASVLLGRPYSLEGKVV 193

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            G+ +G T+GFPTAN++++   +L K GVY    + ++   Y G+ N G NPT+  +  L
Sbjct: 194 SGKHLGNTIGFPTANIEINFKRLLPKGGVYYSNVKVEN-KIYKGITNIGYNPTVQGDS-L 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +E+ I DF+Q IY +   V F   +R E KFK I++L   + +D+  A K 
Sbjct: 252 SVETHILDFNQSIYDEFIEVYFVKRIRDEKKFKSIDELVKQLKQDKAYAEKF 303


>gi|326791494|ref|YP_004309315.1| riboflavin biosynthesis protein RibF [Clostridium lentocellum DSM
           5427]
 gi|326542258|gb|ADZ84117.1| riboflavin biosynthesis protein RibF [Clostridium lentocellum DSM
           5427]
          Length = 325

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 7/306 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  VV +GNFDG+H GH  + + A   A  + +   V SF PHP  +I   +    +   
Sbjct: 24  EDCVVVLGNFDGVHKGHQRLFQVAKDRAKANGLRTVVFSFYPHPTWVI-GDNRKALIMSR 82

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +++++ +MG   LI Y FT   A  S E F   +L++ L+ K ++ G+ + FGK + G
Sbjct: 83  RDKKQVIGEMGIDELIEYPFTRTFAAISPETFFVDILMKRLKAKILVVGSNYYFGKGKTG 142

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L++ GEKY      +D ++   S I S S+IR  + +G++  A  +LG+ + I  +
Sbjct: 143 NPKYLRQLGEKYNIEVCIVDAVKIGGSMISS-SSIRKLILEGNIEKANEMLGHPYMIVGN 201

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+++GRT+GFPT N+   PD +    GVYA   R   +T Y G+ N G NPT+    
Sbjct: 202 VVQGKQLGRTIGFPTINLIADPDRVYPPNGVYATVVRVYSKT-YRGMTNIGVNPTV-SGQ 259

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
             ++E+ IF++  +IYG+   V F+ Y+RPE KFKDI  LK  + +D+   ++   +   
Sbjct: 260 RKMIETHIFNYDADIYGEAVEVYFYHYVRPEQKFKDINALKAQIQQDKWHVQEFFANPIN 319

Query: 315 LSERDR 320
           L   D+
Sbjct: 320 LFANDK 325


>gi|269215224|ref|ZP_05987968.2| riboflavin biosynthesis protein RibF [Neisseria lactamica ATCC
           23970]
 gi|269208000|gb|EEZ74455.1| riboflavin biosynthesis protein RibF [Neisseria lactamica ATCC
           23970]
          Length = 319

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFASRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGVFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVGGGRFQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADM 313

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 314 EAARRW 319


>gi|219850608|ref|YP_002465041.1| riboflavin biosynthesis protein RibF [Chloroflexus aggregans DSM
           9485]
 gi|219544867|gb|ACL26605.1| riboflavin biosynthesis protein RibF [Chloroflexus aggregans DSM
           9485]
          Length = 311

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+ IG FDG+HLGH  ++   ++ A        VL++ P+PR ++Q   P+  L+  
Sbjct: 14  RATVLTIGRFDGVHLGHQQLIRTTVERARALDMLSAVLTWEPNPRAVLQPGQPLQLLTDL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + + ++    LI   FT E    SA +++ ++    + V+ +  G  F  G+ R G
Sbjct: 74  DEKIEQIRRLEPDLLIIAPFTNEIRQLSAAEYMARICA-AVPVREIWVGEDFAMGRGREG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L + G + GF    + +        VSSS IR  +  G+V  A  LLG  F +   
Sbjct: 133 DIPRLMEIGRELGFAVGALSKYMM-AGIPVSSSRIRELVLAGNVAGAGALLGRPFALRGL 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V  G+  GR +GFPTAN+Q++PD++    GVYA R           V N G  PT     
Sbjct: 192 VTRGDGRGRQIGFPTANLQVNPDVVVPAHGVYACRTYLATGEVVPTVTNIGVRPTF-DGT 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             ++E+ + D+  ++Y Q   +     LR E KF  I++L   +  D  +AR +L
Sbjct: 251 RQVVEAHLIDWQGDLYDQHLRIELLMRLRNERKFSGIDELVAQIRHDVAEARVVL 305


>gi|227503417|ref|ZP_03933466.1| FAD synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075920|gb|EEI13883.1| FAD synthetase [Corynebacterium accolens ATCC 49725]
          Length = 340

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 16/316 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
             +P  +    V IG FDG+H GH  ++   ++ A   N    +++F+PHP ++      
Sbjct: 11  DDIPADVGPTSVTIGVFDGLHRGHQQLVSACVEHARANNQVPVMVTFDPHPVSVFLPERA 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG   ++   FT E        +++ +LV  L  + V+ G  F 
Sbjct: 71  PLSVVSFERRLELAEEMGIEMVLVIDFTKELEGVEPRPYVRDLLVGKLHAQHVVVGENFT 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    +++ GE++GF    I  L +     + S+ IR +L++G + +A   LG 
Sbjct: 131 FGAGASGTAEAMRQLGEEFGFSVDII-PLLDEDGVQICSTYIRQSLSRGAIESANWALGR 189

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS--------- 237
            FT+   V+ G   G   LGFPTAN      + +  +GVYA  F    ++          
Sbjct: 190 HFTVTGPVVRGAGRGGKELGFPTANQYFPDTVAIPADGVYAGWFIVHSESPLDGDMQPEV 249

Query: 238 -YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++L  
Sbjct: 250 AYAAAISVGTNPTF-GDEERSVESFVLDRDADLYGYEATVKFVGHLRDMVKFHSVDELLE 308

Query: 297 YMGEDEKKARKILESS 312
            M +D   AR +L + 
Sbjct: 309 AMAQDVAAARTVLAAD 324


>gi|168207526|ref|ZP_02633531.1| riboflavin biosynthesis protein RibF [Clostridium perfringens E
           str. JGS1987]
 gi|170661138|gb|EDT13821.1| riboflavin biosynthesis protein RibF [Clostridium perfringens E
           str. JGS1987]
          Length = 309

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 90/293 (30%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I        L   
Sbjct: 14  KSTYIALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGSPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLKVDLSSFVEFNKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L++  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKELCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|325133569|gb|EGC56231.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M13399]
 gi|325143836|gb|EGC66152.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240013]
 gi|325206750|gb|ADZ02203.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M04-240196]
          Length = 306

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFASRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPDHRYALGGVFVVDADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|289705308|ref|ZP_06501706.1| riboflavin biosynthesis protein RibF [Micrococcus luteus SK58]
 gi|289557971|gb|EFD51264.1| riboflavin biosynthesis protein RibF [Micrococcus luteus SK58]
          Length = 325

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 17/325 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+++++    +P  L   VV +GNFDG+H GH  +L + +++A         ++F PH
Sbjct: 1   MRVWNSLD---EVPTDLPRTVVTLGNFDGVHRGHREVLRRVVELARARDALAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    +P   +  P  +  +L++ G  A++  ++TLE A+ S E+F++ +LV  L  
Sbjct: 58  PRAVHHPEAPHVDIISPEQRVVLLDEAGLDAVLLQRYTLEFADQSPEEFVRGMLVHGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS----QIVSSSNIRTAL 174
             V+ G   RFG+   GD   + + G +YGF    ++E          +  SS+ +R AL
Sbjct: 118 AVVVVGHDVRFGRGNTGDVAEMVRLGARYGFEVEAVEEFPAEHGAEPERRCSSTWVREAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQ 233
             G V  AA +LG    +  +V+HG   GR LGFPTAN++     ++  +GVYA      
Sbjct: 178 AAGDVAQAAAVLGRHHVLAGEVVHGFARGRELGFPTANLETDVQGMIPADGVYAGWVHDA 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIK 287
               +    + G NPT       ++E+ + D         ++YGQ   V F   LR  + 
Sbjct: 238 HGGVWPAAISIGSNPTFEDVS-RVVEAHVIDRHDERVEDFDLYGQHIEVEFVARLRGMVA 296

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           ++ +EKL   + +D  +AR IL ++
Sbjct: 297 YEGVEKLVAQITQDVDEARAILATT 321


>gi|88607389|ref|YP_505701.1| riboflavin biosynthesis protein RibF [Anaplasma phagocytophilum HZ]
 gi|88598452|gb|ABD43922.1| riboflavin biosynthesis protein RibF [Anaplasma phagocytophilum HZ]
          Length = 318

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 4/292 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V+  GNFDG+H GH  +  + +++   +N     L+F+PH    ++     F LS  
Sbjct: 26  REVVLTFGNFDGVHRGHMHVFSEVVRLAQEHNLASAALTFSPHTAVFLKKREN-FLLSDF 84

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +++E      L   +F    A    E FI+ +LV+  + + V+ G    FG    G
Sbjct: 85  ERKVQLIESCDIDYLHVVEFDELFAKMLPEAFIENILVQRCKARHVVVGEDCVFGYRCMG 144

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L+   + YG+  + +D L  +  +I SSS+IR  +  G +  A  LLG    I   
Sbjct: 145 NIDTLRSYSQSYGYKVMVVDHLSISGKKICSSSSIRKCVESGDIQAANLLLGRCHAISGK 204

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G   GRT+GFPT N+ L   I+   GVY  R     Q    G+AN G  PT      
Sbjct: 205 VMRGRARGRTIGFPTLNLSLEHTIMPCRGVYNARVLI-GQEWLLGIANIGVRPTFSEVEL 263

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            +LE  IFDF ++IYG++ TV   D++RPE KF+ IE+L   +  D    ++
Sbjct: 264 PILEMHIFDFDEDIYGRKVTVELLDFIRPEQKFQSIEQLVEQIKRDIAVVKR 315


>gi|149369575|ref|ZP_01889427.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [unidentified eubacterium SCB49]
 gi|149357002|gb|EDM45557.1| bifunctional protein: riboflavin kinase; FAD synthetase
           [unidentified eubacterium SCB49]
          Length = 310

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V       ++     +G VV IG FDG+H+GH  IL++  K A +  +   +L+F PH
Sbjct: 1   MKVHKGAAAYKN----DRGSVVTIGTFDGVHVGHATILKRLAKTAKDLDLDAVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q  + I  L     ++  +  +G   L+ + FT   +  +A ++++ +LV  L+ 
Sbjct: 57  PRMVLQKDTSIKMLHTLEEKKNHVAALGIQHLVIHPFTHGFSRLTATEYVRDILVNQLKA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G   RFG++RA D   L++ G+ Y F    I   +      VSS+ IR AL +G 
Sbjct: 117 KKIIIGYDHRFGRNRAADINDLKEFGKTYLFDVEEITA-QELDDVAVSSTKIRKALEQGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           +  A + LGY + I   +  G+ IGRTL +PTAN++      ++ K GVY  +    ++ 
Sbjct: 176 IETANNYLGYNYNITGTIEKGKAIGRTLDYPTANLKPDEAYKLIPKNGVYVTQATINEKA 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+ + G NPT+       +E++  DF   +Y  + T+SF  Y+R E  F  +  LK 
Sbjct: 236 VY-GITSIGTNPTV-GGKTTTIETYFLDFEGNLYDLQITLSFLKYIRDEATFDGLPALKK 293

Query: 297 YMGEDEKKARKILESS 312
            +  DE  A+  +++ 
Sbjct: 294 AIAGDELFAKNFIKTC 309


>gi|319900842|ref|YP_004160570.1| riboflavin kinase; FMN adenylyltransferase [Bacteroides helcogenes
           P 36-108]
 gi|319415873|gb|ADV42984.1| riboflavin kinase; FMN adenylyltransferase [Bacteroides helcogenes
           P 36-108]
          Length = 320

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 9/311 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+  +  IG FDG+H GH  ++EQ   +         V++F  HPR ++ S      L+ 
Sbjct: 12  LRPSIATIGFFDGVHRGHRYLIEQVCEVAAMRGLASAVITFPIHPRQVMCSDYHPALLTT 71

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L + G    +   FT E A  SA QF+  +   +L ++ ++ G   RFG +R+
Sbjct: 72  CDEKISLLAETGIDYCMMLDFTPEVARLSARQFMAVLKERYL-IEVLVIGYDHRFGHNRS 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
                  + G++ G   +       NK      VSSS IR  L KG+V  AA  LGY F 
Sbjct: 131 EGFDDYVRYGKELGIEVLLAHAYYYNKEKTGSTVSSSLIRHLLLKGNVSAAAEYLGYGFF 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           +   V+ G ++GR +GFPTAN+++     I+  +GVYA+ + + D   Y G+ + G  PT
Sbjct: 191 LGGTVVGGYQVGRKIGFPTANLRVDSPDKIIPSDGVYAV-YVSLDGMRYGGMLSIGYRPT 249

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +       +E  IF F  +IY +   VSF  Y+RPE KF  +E+L   +  DE++   +L
Sbjct: 250 LANGTDRSIEVNIFHFDADIYDRPMQVSFVRYMRPEQKFNTVEELIARIRRDEEEINSVL 309

Query: 310 ESSYPLSERDR 320
             S     ++R
Sbjct: 310 SMSTSSIRQER 320


>gi|315641137|ref|ZP_07896216.1| riboflavin biosynthesis protein RibF [Enterococcus italicus DSM
           15952]
 gi|315483145|gb|EFU73662.1| riboflavin biosynthesis protein RibF [Enterococcus italicus DSM
           15952]
          Length = 312

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 150/316 (47%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M+V              +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 1   MNVIEIRHPYHQDQLPDEPIVLVLGFFDGVHKGHQKVIETGRKIANQRGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q  +P  +  L+    +E+ + + G   L    FT   A    ++F+ + +V W 
Sbjct: 61  PSIVFQKINPDTMKYLTSLKQKEEKMAENGVDFLFFVDFTSAFAGLKPQEFVDQYIVGW- 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + V+ G  + +G     D   L +   K  F  V + +      + VSS+NIR AL+ 
Sbjct: 120 HAEVVVAGFDYTYGPKDIADMPHLAEY-AKNRFEIVTVPK-ETLAGEKVSSTNIREALSN 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     +LG  +  E  V+HG+  GRTLG+PTAN+Q    + L KEGVY       D 
Sbjct: 178 GEMEEVTAMLGTTYETEGIVVHGDARGRTLGYPTANIQTKASVRLPKEGVYVTEILVGD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T +  + + G N T   N P+ +E  I DF Q+IYG+   V +  YLR ++ F  +E L 
Sbjct: 237 TWFPSMGSIGTNNTFEQNRPVTVEINILDFHQDIYGEHVRVRWVHYLREQVAFPSMEALI 296

Query: 296 IYMGEDEKKARKILES 311
             + +DEK  R    +
Sbjct: 297 DQLQQDEKDTRTYFGN 312


>gi|257878518|ref|ZP_05658171.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,230,933]
 gi|257812746|gb|EEV41504.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,230,933]
          Length = 313

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       QS        V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKEKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+   +     
Sbjct: 297 EQLKKDEQATAEYFSQQ 313


>gi|33519592|ref|NP_878424.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia
           floridanus]
 gi|33517255|emb|CAD83638.1| riboflavin biosynthesis protein RibF [Candidatus Blochmannia
           floridanus]
          Length = 311

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 152/313 (48%), Gaps = 6/313 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +   +    ++ +H +G ++AIGNFDG H GH  ++ Q    KI    P+ V+ F P 
Sbjct: 1   MELIRGL---HNIKSHHRGCLLAIGNFDGFHRGHQALISQLNKKKINYKRPVMVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+        I  L+    + + L   G   ++   F  + A+  A  F++++L+  L V
Sbjct: 58  PKEYFSKIITI-RLTRFRDKVQYLFTAGVDIVLCVGFNKKLASIKAYNFVKEILIYKLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  FRFG  R GD   L+  G+  GF  +  D   ++  + +SS+ ++TAL +  
Sbjct: 117 RCVCVGNDFRFGAFRHGDYNFLKTLGKHKGFKVICADTCLDSYGKKISSTLVKTALIENR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +++A  L+G+ + I   VIHG ++GR +GFPTAN+ L    L   GVYA++         
Sbjct: 177 IVDAEFLMGHSYCISGKVIHGNELGRIIGFPTANISLKGKNLPVHGVYAVKVYGILHFPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G  PT+       LE  I + S  +Y    TV   D +R E  F  I KL+  +
Sbjct: 237 PGIANIGTRPTINGVTQHQLEVHILNISTNLYSYYITVVILDKIRNEQCFNSIHKLQRQI 296

Query: 299 GEDEKKARKILES 311
             D  +     + 
Sbjct: 297 KYDIDQVNNYFKK 309


>gi|300727497|ref|ZP_07060888.1| riboflavin biosynthesis protein RibF [Prevotella bryantii B14]
 gi|299775200|gb|EFI71801.1| riboflavin biosynthesis protein RibF [Prevotella bryantii B14]
          Length = 311

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 151/318 (47%), Gaps = 13/318 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M++ H +      LP      V  IG FDG+H GH  +L   +  A        V++F  
Sbjct: 1   MNIIHISARHVSDLP-----CVATIGFFDGVHRGHQFLLHHVVDEAKKCGLKSMVITFES 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR ++        LS    +  +L  +G       +F  +TA+ SA  F++KVL + L 
Sbjct: 56  HPRKVLHLDYQPEMLSTLDEKLNLLAGLGVDTCGLLRFDQQTASMSAFYFMEKVLRDQLH 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ +  G   RFG +R        K G++ G   +    +   +   VSS+ IR  L +G
Sbjct: 116 VRKLYIGYDNRFGHNREEGFNDYVKYGKQLGIEVINT-SVFQLQQVNVSSTVIRKMLYEG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRT-QD 234
            V  A   LGY +++  +V+ G + GR LGFPTAN+ LS    ++   G YA+      D
Sbjct: 175 KVEEAHACLGYPYSLTGEVVRGFQEGRRLGFPTANIDLSACEKLIPANGAYAVLVHIEGD 234

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y G+ + G  PT         E  IFDF+  IYG+R +VSF  ++R E KF+ I+ L
Sbjct: 235 SRVYRGMMDIGNRPTFC-GLKRSYEVNIFDFTGNIYGKRVSVSFMHFIRTEQKFESIDAL 293

Query: 295 KIYMGEDEKKARKILESS 312
           K  +  D++     L+ +
Sbjct: 294 KAQLENDKRVVNDKLDKN 311


>gi|163814219|ref|ZP_02205611.1| hypothetical protein COPEUT_00373 [Coprococcus eutactus ATCC 27759]
 gi|158450668|gb|EDP27663.1| hypothetical protein COPEUT_00373 [Coprococcus eutactus ATCC 27759]
          Length = 323

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 13/306 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLS 73
           N  +   VA+G FDGIH GH L++EQ +K+  +  +  V +F+     +    S + T+ 
Sbjct: 13  NSTERTAVALGKFDGIHQGHMLLIEQVLKLQKHGYMGVVFTFDMRENHVFD-VSNMKTIY 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + +++   G   L+ Y F    A    E FI+ +LV  +    V+ G+ +RFG+DR
Sbjct: 72  TSEEKAQVVSDTGVDVLVEYPFDDAFAATEPEAFIRDILVGMMRAGYVVVGSDYRFGRDR 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD   L+   E+YG+  + ID+L  +    VSS+ IR  +++G+V     +LG  +++ 
Sbjct: 132 KGDVETLKSHAEEYGYKVIVIDKLEQDDEV-VSSTVIRRNISEGNVRAVIPMLGRPYSMT 190

Query: 194 SDVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRT---------QDQTSYSGVAN 243
            +V+ G+++GRT+G PTAN +     +    GVYA R +               Y G+ N
Sbjct: 191 GEVVSGKQLGRTIGIPTANMLPQDHKLYPPAGVYASRIKIVKGEHAGHEDPFRMYMGITN 250

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT+  NG + +E+ IFDF ++IYG    V     +R E KF  IE+LK  M  D  
Sbjct: 251 IGDNPTVNDNGNITIETNIFDFDRDIYGNIIKVELIQKIRGEKKFAGIEELKKQMSNDID 310

Query: 304 KARKIL 309
            A+KI+
Sbjct: 311 AAKKII 316


>gi|325860476|ref|ZP_08173587.1| riboflavin biosynthesis protein RibF [Prevotella denticola CRIS
           18C-A]
 gi|325482003|gb|EGC85025.1| riboflavin biosynthesis protein RibF [Prevotella denticola CRIS
           18C-A]
          Length = 350

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 12/327 (3%)

Query: 2   HVFHNIEIN-----QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLS 54
            ++  +E+N     +     L      IG FDG+H GH  ++ + +  A        V++
Sbjct: 21  QIYRQLELNIIYIKEGERPELPALAATIGFFDGVHRGHRFLIGRVVDEARRSGMASAVIT 80

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F+ HPR ++Q+      L+    + ++L +      +   F    A   A +F+ +VL  
Sbjct: 81  FDRHPRQVLQADYQPELLTTLERKLQLLSETQVDNTLVLHFDRSLAALPARRFMDEVLRR 140

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ ++ G   RFG DRA       + G+  G   V  D       + VSSS IR  +
Sbjct: 141 QLNVRKLLIGYDNRFGHDRAEGFDDYVRYGQALGIEVVRADAFLP-GGEKVSSSVIRDRI 199

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRT 232
            +G + +A  LLGY +TIES ++ G   G  LGFPTAN+ ++    ++   GVYA+  R 
Sbjct: 200 RRGDIASANRLLGYAYTIESTIVRGYGNGHRLGFPTANLDMAACRQLIPAAGVYAVAVRQ 259

Query: 233 QDQTSY-SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +D + +  G+ N G  PT      + +E  IF F  +IY +   VSF   +R E +F  +
Sbjct: 260 KDSSEWRRGMMNIGTRPTFN-GKAMSMEVNIFRFDGDIYDKPLAVSFIAKIRDERRFGSL 318

Query: 292 EKLKIYMGEDEKKARKILESSYPLSER 318
           E L   + +D +    + ++     ++
Sbjct: 319 EALAHQLEQDREAINHLFDAGQIRQQQ 345


>gi|330901415|gb|EGH32834.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 288

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 89/275 (32%), Positives = 130/275 (47%), Gaps = 4/275 (1%)

Query: 35  HLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             IL +  +       P  V+ F P PR      +    L+    + ++L   G   ++ 
Sbjct: 12  QAILARLRERAVELGVPSCVVIFEPQPREFFAPETAPARLARLRDKLELLSAEGVDRVLC 71

Query: 93  YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
             F       SA  F++ VL++ L V+ +  G  FRFG DR GD   LQ+ G  YGF   
Sbjct: 72  LSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVE 131

Query: 153 FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
               +  +    VSS+ +R AL       A  +LG  F I   V+HG+K+ R LG PTAN
Sbjct: 132 AAQTVEID-GIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTAN 190

Query: 213 MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
           +QL    +   GVY +     D  ++ GVAN G  PT+  +G   LE  + DF+ ++Y +
Sbjct: 191 VQLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDR 249

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           R TV+F   LR E +F  +E LK  +  D   AR 
Sbjct: 250 RLTVAFHHKLRDEQRFASLEALKTAINADVAAARA 284


>gi|296120982|ref|YP_003628760.1| riboflavin biosynthesis protein RibF [Planctomyces limnophilus DSM
           3776]
 gi|296013322|gb|ADG66561.1| riboflavin biosynthesis protein RibF [Planctomyces limnophilus DSM
           3776]
          Length = 369

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 6/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPI 69
           S     + G VAIGNFDG+H GH  ++    + A         ++F+PHP  +++ S   
Sbjct: 66  SFTPECRRGFVAIGNFDGVHRGHQAMMALLAQRARELGGRALAMTFDPHPWELLRPSGAP 125

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            +L     + ++L++ G   ++  + T E    SA  F Q++++E L+ + +I G  F F
Sbjct: 126 PSLMTLEHRVELLKRYGADEVLVCRTTHELLKLSASDFFQQIIIETLDARGLIEGPNFFF 185

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G++R G+  +L++  EK G     +  +     Q+VSSS IR+ L  G +  A  LLG+ 
Sbjct: 186 GREREGNITLLKQLCEKAGLSLDIVPPILVAD-QLVSSSVIRSLLGAGQMKEAVDLLGHP 244

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           + I   V  G + GRT+GFPTAN+   P+++   GVY+ R R     SY    + G NPT
Sbjct: 245 YQISGVVGTGMQRGRTIGFPTANLTQCPNLIPAHGVYSGRVRLD--RSYPAAIHIGPNPT 302

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   +E  I DF+ ++YGQ  +V     +R   KF D E L   +  D ++AR   
Sbjct: 303 FGE-QESKIEVHILDFAGDLYGQMLSVDLQARIRGVTKFADKEALLAQLHRDCQEARAHF 361

Query: 310 ES 311
            S
Sbjct: 362 AS 363


>gi|300788167|ref|YP_003768458.1| riboflavin kinase [Amycolatopsis mediterranei U32]
 gi|299797681|gb|ADJ48056.1| riboflavin kinase [Amycolatopsis mediterranei U32]
          Length = 310

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 12/300 (4%)

Query: 22  VAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IG FDG+H GH  ++ +  A       P  +L+F+PHP  +++  S    L+    + 
Sbjct: 2   VTIGVFDGVHRGHQELISRTVAAAAERGLPSVMLTFDPHPSEVLRPGSHPAQLTTLRRKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I+E +G        FTLE +    E+F+ +VLV+ L    VI G  F FG   AGD  +
Sbjct: 62  EIVESLGVDVFCVLPFTLELSRLQPEEFVHEVLVDRLHAAAVIVGDNFTFGAKAAGDVEL 121

Query: 140 LQKRGEKYGFHTVFID------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           L+  G ++GF     +         +  +   SS+ +R+ +  G V+ AA  LG    +E
Sbjct: 122 LRTLGRRFGFAAFGAELQGKELSEEDQSAITFSSTYVRSCIDAGDVVAAAEALGRPHRLE 181

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT--QDQTSYSGVANFGRNPTM 250
             V+ G+  G  LG+PTAN+       +  +GVY+  F              + G NPT 
Sbjct: 182 GIVVRGDGRGHELGYPTANLSTPRFAAVPADGVYSAWFTRSADPARRLRAAVSVGTNPTF 241

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  +E+F+ D  ++ YGQ   + F   LR +++F D   L   + +D  + RK LE
Sbjct: 242 -SGRERTVEAFVLDVDEDFYGQHVAIDFVTRLRDQVRFADSAGLVAQIDDDVVETRKALE 300


>gi|257894723|ref|ZP_05674376.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,408]
 gi|294618713|ref|ZP_06698245.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1679]
 gi|257831102|gb|EEV57709.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,408]
 gi|291595026|gb|EFF26371.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1679]
          Length = 313

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       QS        V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+   +     
Sbjct: 297 EQLKKDEQATAEYFSQQ 313


>gi|227551748|ref|ZP_03981797.1| FAD synthetase [Enterococcus faecium TX1330]
 gi|257895656|ref|ZP_05675309.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com12]
 gi|293377734|ref|ZP_06623923.1| riboflavin biosynthesis protein RibF [Enterococcus faecium PC4.1]
 gi|227179053|gb|EEI60025.1| FAD synthetase [Enterococcus faecium TX1330]
 gi|257832221|gb|EEV58642.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com12]
 gi|292643734|gb|EFF61855.1| riboflavin biosynthesis protein RibF [Enterococcus faecium PC4.1]
          Length = 313

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       Q         V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQPEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   AN + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMADLGIDYLYEVDFTSSFANLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCIYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+   +     
Sbjct: 297 EQLKDDEQATAEYFSQQ 313


>gi|94987151|ref|YP_595084.1| FAD synthase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731400|emb|CAJ54763.1| FAD synthase [Lawsonia intracellularis PHE/MN1-00]
          Length = 347

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 162/309 (52%), Gaps = 18/309 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   + +GNFDG+HLGH  +L+          S  TV++F PHP+ ++   SP   L+  
Sbjct: 20  KKTTITLGNFDGVHLGHQALLKTIYLTAKKQQSISTVITFEPHPQAVLIGESP-SLLTTK 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K+++ MG   + +  FT   AN + EQF+Q +L+E L ++ ++ G  F  GK+R G
Sbjct: 79  KEKLKLIKSMGIDLIFQLNFTSTLANMTTEQFVQSILLERLHMEGIVLGHDFSMGKERLG 138

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
            + +L   G+  GF       +   K Q VSSS IR A+ +G +  A  LLG  ++I+  
Sbjct: 139 TQHVLSTLGKTMGFTVTH-QPVFTFKEQPVSSSLIREAIQEGAIEKANLLLGRCYSIDGT 197

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT---QDQTSY----------SGVA 242
           +IHG+K GR LGFPTAN+ LS +++   GVYA        QD T Y            V 
Sbjct: 198 IIHGKKRGRMLGFPTANLALSSNLIPSTGVYATLVTLESNQDNTFYIPVQHQKNTFLAVT 257

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N G NPT   + P  +E+ + +F  ++Y Q  T++F   LR E  F +I  L   + +D 
Sbjct: 258 NIGINPTFGDSIP-KIETHLLNFHNDLYEQHMTINFLKKLREEAIFSNISSLITQIKDDI 316

Query: 303 KKARKILES 311
            + + I ++
Sbjct: 317 SQTKTIFKN 325


>gi|260887256|ref|ZP_05898519.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|330838987|ref|YP_004413567.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|260863318|gb|EEX77818.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
 gi|329746751|gb|AEC00108.1| riboflavin biosynthesis protein RibF [Selenomonas sputigena ATCC
           35185]
          Length = 321

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 7/306 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIF 70
           L +  +G V+A+G FDG+H+GH  IL++A ++A +        +F  HP ++I       
Sbjct: 10  LSDSYQGIVIALGTFDGVHIGHQSILQRARELAADIHGVSMAFTFQEHPLSVIFPERAPK 69

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +     +E I+EK+G   L+   FT   A  SA  F++ +  E      V+ G  + FG
Sbjct: 70  MIRNTESKEAIIEKLGVDILMNVPFTKNFAAISATGFLKLLQ-ENFSPAYVVVGANYTFG 128

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
               GD   LQ+RGE++GF    I        ++VSS+ IR+ + +G++      L +  
Sbjct: 129 FQGTGDSAFLQQRGEEFGF-VSRIGNSVLRDGKMVSSTRIRSLIAEGNLDLVNQYLKWPL 187

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
                V +GE+ GR LGFPTAN+ L     LL  GVYA+R    D   Y GVAN G NPT
Sbjct: 188 DYTGIVTYGEQRGRKLGFPTANIALDDSYALLPNGVYAVRVHFND-AVYPGVANIGSNPT 246

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   LE  +  F+  +YGQ+  V F   LR E KF D++ L   +  D ++A+   
Sbjct: 247 FEEV-ERRLEVHLMQFNGNLYGQKICVDFLGKLRDEKKFPDVDALVAQIHRDIEQAQHFW 305

Query: 310 ESSYPL 315
           +    +
Sbjct: 306 DMPVHV 311


>gi|254431093|ref|ZP_05044796.1| riboflavin biosynthesis protein RibF [Cyanobium sp. PCC 7001]
 gi|197625546|gb|EDY38105.1| riboflavin biosynthesis protein RibF [Cyanobium sp. PCC 7001]
          Length = 329

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 8/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           +   +A+G+FDG+H GH  ++    +  +A+  P+   V+SF PHPR ++    P   L 
Sbjct: 12  RPTAIALGSFDGLHRGHRRVIAAVTEPAVADGVPLVPTVVSFWPHPREVLHGE-PRLRLD 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            PS + ++LE +G   L+   F  + A    E F+ +VLV  L+ + +  GT FRFG +R
Sbjct: 71  LPSEKLELLEPLGVRQLVLVPFDRQLAALDPEAFVDRVLVNQLDSRRIAVGTNFRFGVNR 130

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD G L       G     +  +  +  + +SSS IR AL  G +L A  LL   +   
Sbjct: 131 QGDTGTLVALAAARGIEVAVV-PMLTDGEERLSSSRIRRALAAGDLLEAERLLQRPYRFR 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMV 251
             V+ G  +GR LG+PTAN+Q+     L  EGVYA R +      +   V N G  PT+ 
Sbjct: 190 GAVVQGRGLGRQLGWPTANLQVDGRKFLPMEGVYAARAQVDAAGPWLPAVMNLGPQPTVD 249

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P  P  +E  + D + E++G++  V     LR + +F  +E L   +  D  +AR
Sbjct: 250 PLAPSAVEVHLLDRNLELHGRQLQVEPVALLRRQQRFDGVEALSAQIARDAARAR 304


>gi|296117683|ref|ZP_06836267.1| riboflavin biosynthesis protein RibF [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295969414|gb|EFG82655.1| riboflavin biosynthesis protein RibF [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 339

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 21/332 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +++      ++P  L    V IG FDG+H GH  ++   +  A    S   +++F+PH
Sbjct: 1   MDIWYG---TAAVPKDLDNSAVTIGVFDGVHRGHQKLINATVDKARQTGSKAVMVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++         ++    +  + E  G  A++   FT E +  + E++++ +L + L  
Sbjct: 58  PVSVFLPRRAPLGITTLHERFSLAETYGIDAVLVIDFTKELSGTTPEKYVEYLLEDTLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  F FG++ AG    L+         TV + +L ++    +SS+ +R  L++G+
Sbjct: 118 SHIVVGANFTFGENAAGTADTLKNICAAR--MTVDVIDLLDDDGVRISSTTVREYLSQGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  A   LG  F++   V+ G   G   LGFPTAN      + L  +GVYA         
Sbjct: 176 VARANWALGRHFSVSGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTE 235

Query: 237 -----------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
                      +Y+   + G NPT   +    +ESF+ D   ++YG    V F D++R  
Sbjct: 236 APVSGNMEPEIAYAAAISVGTNPTF-GDEQRSVESFVLDRDADLYGHDVKVEFVDHVRTM 294

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
            KF  +E+L   M +D  K RKIL       +
Sbjct: 295 EKFDSVEQLLDVMAKDVIKTRKILAEDVAAQQ 326


>gi|328675588|gb|AEB28263.1| Riboflavin kinase / FMN adenylyltransferase [Francisella cf.
           novicida 3523]
          Length = 306

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 170/314 (54%), Gaps = 12/314 (3%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M +  N+ +    LP       +AIG+FDG+HLGH  I+++ + IA  + +   +L F P
Sbjct: 1   MKIITNLNKTKDPLPK-----AIAIGSFDGVHLGHQAIIKKLLTIAKKNNLVPYILFFEP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P+           +     +   + K+G   +I  KF  + AN +A +FI++ LV+ L 
Sbjct: 56  LPKEFFLKDKAPLRIYDFRNKVINIHKLGIKHIICQKFNTKFANITANEFIEEFLVKKLN 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K +I G  F+FGK+R GD  +L +  + + F    +  L N  +  +SSS+IR AL   
Sbjct: 116 TKHIIIGDDFKFGKNRGGDYALLNQYSQTHDFSVDKVSTL-NLDNHRISSSDIRQALITH 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +++ A  LLG    I S VIHG+K GR +GF TAN +L  +  LK GVY  R    +   
Sbjct: 175 NLIEANKLLGESLKINSRVIHGQKNGRKIGFNTANQKLPKNSALK-GVYLTRVFIDNAIF 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G  PT+      LLE+ IF+F+QEIYG+  T     ++R E+KF   E+LK+ 
Sbjct: 234 Y-GVTNAGTRPTI-DGKNNLLETHIFNFNQEIYGKHITTEIVSFIRSEMKFNSFEELKLQ 291

Query: 298 MGEDEKKARKILES 311
           + +D + A+K++ +
Sbjct: 292 ISKDIQTAKKLIST 305


>gi|94969658|ref|YP_591706.1| riboflavin kinase / FMN adenylyltransferase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551708|gb|ABF41632.1| FMN adenylyltransferase [Candidatus Koribacter versatilis Ellin345]
          Length = 315

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF +++    +P      VVAIGNFDG+H  H  +L+  +  A+        ++F+PH
Sbjct: 1   MDVFRSLD---EIPAGYGPTVVAIGNFDGVHRAHQRVLKALVNRAHHIGGKAIAITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++  S    L+P +++ +++   G  A +   FT + +N S  +F+Q++LVE L  
Sbjct: 58  PTRILRPDSAPKLLTPLALKLRLMAATGVDATLVLPFTRDLSNLSPREFVQRILVEKLAT 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  F FG   +G+   L++ G + GF  V I      +   VSSS +R  +  G 
Sbjct: 118 KEVHEGYNFHFGHKASGNILTLEELGRELGF-VVKIYPEMKLRQHTVSSSEVRKLIAAGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  F++ S    G   G     PT N+    + +   GVY    R  ++T +
Sbjct: 177 MSRARTLLGRSFSVVSHPGRGRGFGHKYTVPTINLVEYNEQVPGNGVYITTTRVANET-F 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFS-QEIYGQ-RCTVSFFDYLRPEIKFKDIEKLKI 296
             V N G  PT   +G   +E+ + +F   E+  Q    ++F   +R EIKF   + LK 
Sbjct: 236 DSVTNVGVRPTFGDDG-FAIETHLLNFHPIELTAQTEVEITFLKRIRDEIKFPHTDALKA 294

Query: 297 YMGEDEKKARKILE 310
            +G D K A +  +
Sbjct: 295 QIGRDVKTALRYFK 308


>gi|260589523|ref|ZP_05855436.1| riboflavin biosynthesis protein RibF [Blautia hansenii DSM 20583]
 gi|260540091|gb|EEX20660.1| riboflavin biosynthesis protein RibF [Blautia hansenii DSM 20583]
          Length = 316

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
              V +G FDG H GH  ++E    K   N    + +F+  P    Q       L     
Sbjct: 15  RSAVTLGKFDGFHRGHQKLVECIKQKSGENCRTIIFTFD-LPYKAYQQKCMPKLLLTYEE 73

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++ E +    L    FT E  N   E F+++ LV+ L  + V  G+ F FG +R+G+ 
Sbjct: 74  KREVAEALHADILAECPFTEELMNMEPEVFVKEYLVDRLHAEYVAIGSDFHFGHNRSGNP 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L   GEKYGF    I++ R+ + + +SS+ IR  L +G +     LLGY + I+ +++
Sbjct: 134 EVLSALGEKYGFTVEIIEKERDGERE-ISSTYIREELEQGRMEKVQKLLGYPYFIKGEIV 192

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG ++GRT+G PTAN+   P   L   GVY  +        YSG+ N G  PT+  N  +
Sbjct: 193 HGRQLGRTIGVPTANLIPPPMKKLPPNGVYVTQSSVGG-KVYSGITNVGYKPTVKENF-I 250

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +E+++F  ++++YGQ   V F+ YLRPE KF  + +LK  +  D + AR   E  Y
Sbjct: 251 GVETYLFHCNEDLYGQEAEVRFYKYLRPEKKFDSLSELKTQLDIDVETARAFFEKEY 307


>gi|319950923|ref|ZP_08024800.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dietzia
           cinnamea P4]
 gi|319435416|gb|EFV90659.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Dietzia
           cinnamea P4]
          Length = 329

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 16/308 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
            G  VA+G FDG+H GH  ++++A+           +++F+PHP  +++  +    L+P 
Sbjct: 24  GGTSVALGVFDGLHRGHRALVDRAVGAGRELGASPVLVTFDPHPVEVVRPGTHPSVLTPL 83

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++    G  A+    F  E A++  ++F+ +VLV  L+ + V  G  F FG+  AG
Sbjct: 84  PRRAELAGGFGVEAVFALPFDREMASWEPDEFVDRVLVSGLDARAVTVGRNFTFGRRAAG 143

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               ++    + G     +D L  +  + VSSS IR  L++  V  AA +LG    +   
Sbjct: 144 TPQTMRALCAERGIACEVVD-LLESGGETVSSSRIRRLLSESDVAAAAEILGRPHRVSGV 202

Query: 196 VIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT----------SYSGVAN 243
           V+HG    GR LG+PTAN+ L     +  +GVYA  F   D             Y+   +
Sbjct: 203 VVHGAGRGGRDLGYPTANLDLPEHTAVPADGVYAGWFTVLDDGPVDGSIVPGRPYASAIS 262

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT   +    +E+F+ D S ++YG+   V F D++R   KF  +++L + M  D +
Sbjct: 263 VGTNPTF-GDAARSVEAFVLDESADLYGRTAAVDFVDHVRDMEKFSSVDELLVAMDRDVR 321

Query: 304 KARKILES 311
           + R +L +
Sbjct: 322 RTRTVLGA 329


>gi|317504295|ref|ZP_07962283.1| riboflavin biosynthesis protein RibF [Prevotella salivae DSM 15606]
 gi|315664589|gb|EFV04268.1| riboflavin biosynthesis protein RibF [Prevotella salivae DSM 15606]
          Length = 314

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 97/307 (31%), Positives = 146/307 (47%), Gaps = 7/307 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
            N +   V  IG FDG+H GH  +++Q   IA       TV++F+ HPR ++QS      
Sbjct: 10  NNAVAPCVATIGFFDGVHRGHKYLIQQVNSIAKACGLASTVITFDRHPRQVLQSDYVPQL 69

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+P   +  +L K G    +   F    A  SA  F+++VL   L VK ++ G   RFG 
Sbjct: 70  LNPLDRKLLLLSKTGIDNAVVLPFDASVAQLSAYDFMKEVLRNRLNVKKLVIGYDNRFGH 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R        + G + G   +       +    +SSS IR  L +G V  A   LGY +T
Sbjct: 130 NRTETFEDYVRYGHELGIEVIHHTAFELH-GVNISSSVIRGFLQEGEVEMATLCLGYPYT 188

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSY-SGVANFGRNP 248
           +   V+HG   GR +GFPTANM ++    ++   GVYA+  + ++Q     G+ N GR P
Sbjct: 189 LIGKVVHGFAQGRLMGFPTANMDVAESGQLIPATGVYAVNVKLKNQPHLLHGMMNIGRRP 248

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T      L LE  IF+F  ++YG+   VSF  ++R E KF    +L   + +D     + 
Sbjct: 249 TFN-GTALSLEVNIFNFRGDLYGELIEVSFIRHIRKERKFNSAAELAEQLQQDRTMIEEQ 307

Query: 309 LESSYPL 315
                 L
Sbjct: 308 FNKDRDL 314


>gi|325290356|ref|YP_004266537.1| riboflavin kinase; FMN adenylyltransferase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965757|gb|ADY56536.1| riboflavin kinase; FMN adenylyltransferase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 310

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++A+GNFDG+HLGH  +LE   + A      + VL F+PHP  I+     +  L+  
Sbjct: 13  KPSIIALGNFDGLHLGHRKLLEYGAEKAREMKVGLCVLLFDPHPFKILHPDKKLNLLTTT 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++  +MG   +   KFT E AN S ++F   + ++ L    ++ G  + FG    G
Sbjct: 73  REKLRLFSEMGVEKVFLLKFTAEVANTSPKEFTCGI-IKDLGAVHIVVGFNYSFGARGVG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+  G++ GF    I   +    +++SSS IR  L  G +++A  LLG    I   
Sbjct: 132 TPSDLESYGQECGFGVSVIQAEKIED-RVISSSEIRRFLLNGEIISAKKLLGRWPGISGK 190

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HGEK GR LGFPTAN+    D+L  K GVYA+      Q  + G+ N G  PT     
Sbjct: 191 VVHGEKRGRILGFPTANILPDEDLLIPKNGVYAVSSAIDGQKIW-GMMNIGYRPTFHSRP 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              +E    +F   +Y Q   +S  D LR E KF  +E++   + +D +    + ++S
Sbjct: 250 EKSIEIHFLNFEGNLYDQDLMISIHDRLRTEKKFSGVEEMIAQLNKDREAVITLYKTS 307


>gi|261749622|ref|YP_003257308.1| riboflavin biosynthesis protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497715|gb|ACX84165.1| riboflavin biosynthesis protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 319

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 111/325 (34%), Positives = 169/325 (52%), Gaps = 11/325 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI---KIANNSPITVLSFNP 57
           M ++  I+   S        V  +G FDG+H GH  +++  I   K        +L+FNP
Sbjct: 1   MKIYSFIDEFSSF----SPCVFTLGFFDGVHRGHQRVIQNLIFRAKKKEEYCSVLLTFNP 56

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP+ ++     I  L+  S +   L K G   LI + FT+  +  SA+ F+QK+L   L+
Sbjct: 57  HPKEVLNPGKKILYLNTLSERIYHLRKTGVEHLIIHPFTINFSKLSAKDFLQKILFSKLK 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K +ITG     GKDR G    L+K  + YGF    +   +  K +I+SS+ IR +L KG
Sbjct: 117 IKQIITGYDSHLGKDRDGSSHQLKKFSQIYGFKLYQVSPHK-LKKKIISSTYIRKSLLKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
           ++  A   LGY +T+   VI G  IGRTL FPTAN+Q+    L  K+GVYA++    +Q 
Sbjct: 176 NIEWANKALGYLYTLSGYVIKGRGIGRTLNFPTANVQVDKKKLIPKKGVYAVKINYLNQI 235

Query: 237 SYSGVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            Y G+ N G  PT+   N  + +E  IFDF Q IYG++  V      R E+KF+ +  LK
Sbjct: 236 -YQGMMNIGICPTIHLFNKEIKIEVHIFDFHQNIYGKKIDVLIVQIFRDEMKFQTLHDLK 294

Query: 296 IYMGEDEKKARKILESSYPLSERDR 320
             + +D+ K +          +++R
Sbjct: 295 RQISQDKMKIKNFFNQIIYCEKKNR 319


>gi|304384874|ref|ZP_07367220.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici DSM
           20284]
 gi|304329068|gb|EFL96288.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici DSM
           20284]
          Length = 315

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 15/320 (4%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFN 56
           M +   H+    + +P   +  V+A+G FDG+H GH  ++++A +IA      +  ++F+
Sbjct: 1   MQIIKIHHPYDKKMIPE--EKVVLALGFFDGMHRGHQAVIQKAREIANAKGLALAAMTFD 58

Query: 57  PHPRTII----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
            H   +        S +  L+  S + +++E  G   L    FT    + + ++F+ + +
Sbjct: 59  HHASVVFPKPQHRFSALSYLTSVSRKAELMEAAGVDILYVVNFTSAFGSLTPQEFVDQYM 118

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           V  L  + V+ G  + FG     +   L +   ++ F  V + ++   + Q + S+ IR 
Sbjct: 119 V-GLNAEVVVAGFDYTFGPVATANMDTLPEI-AQHRFEVVKVPKI-IAQGQKIGSTAIRN 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFR 231
           A+  G +  A   LGY F     V+HGE  GRTLGFPTAN+      I    G+Y +  +
Sbjct: 176 AVADGEIDEANRYLGYPFETNGLVVHGEARGRTLGFPTANIVSNPNQITPGIGIYVVEIK 235

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
             D T Y G+A+ GRN       P+  E  I DF+QEIYG+   V +   LR E+KF  +
Sbjct: 236 IAD-TWYQGMASVGRNVVFGDGRPVTTEINILDFNQEIYGETVRVKWHHRLRGEVKFASV 294

Query: 292 EKLKIYMGEDEKKARKILES 311
           + L   + +DE   R   + 
Sbjct: 295 DALIAQLHQDEADTRAFFKK 314


>gi|169350217|ref|ZP_02867155.1| hypothetical protein CLOSPI_00961 [Clostridium spiroforme DSM 1552]
 gi|169293000|gb|EDS75133.1| hypothetical protein CLOSPI_00961 [Clostridium spiroforme DSM 1552]
          Length = 310

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 10/309 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + +   +N+   + LK   VA+G FDG+HLGH  ++E+ I++    N    +L+F+ H
Sbjct: 3   MEIIY---LNKECNDDLKDSCVALGFFDGMHLGHQKLVEKVIEVANKKNLKKALLTFDQH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++ + + S    L     +   LE+ GF  L   KF  E A+  A  FI + +V+   +
Sbjct: 60  PKSYLANVS-FKELMSLDDKAMFLEEYGFDYLFVLKFDFELASMRALDFINEFIVKT-NI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F FGK+  G+   L +  EK  +    I +   N    +SSS ++ ALT G+
Sbjct: 118 KHIICGFDFHFGKNGEGNFETLIQ-NEKNNYEVSVIKKQEYNH-HKISSSYLKEALTNGN 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V     LLG  + +   V+HG K GR +GFPT N+  +   L K GVY +     D   Y
Sbjct: 176 VELVEKLLGRYYCVSGKVVHGLKNGRKIGFPTVNIDANNYFLPKNGVYGV-IIVIDGKRY 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G NPT      + LE  IFDF Q++YG+  TV F   +R E +F  I++L   +
Sbjct: 235 LGMANLGYNPTFNVLTKVSLEVNIFDFDQDVYGKYVTVFFIKKIRYEKRFNSIDELINQL 294

Query: 299 GEDEKKARK 307
            +D K+ + 
Sbjct: 295 NQDRKQIKN 303


>gi|297571206|ref|YP_003696980.1| riboflavin biosynthesis protein RibF [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931553|gb|ADH92361.1| riboflavin biosynthesis protein RibF [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 331

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 16/328 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V+H+   +  +P      V+ IG FDG+H GH  ++ + ++I    N P   L+F+PH
Sbjct: 1   MQVWHS---SSDVPADFGASVLTIGIFDGVHRGHQEVVRETVRIARERNLPAVALTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +    S +  ++  + + + LE  G  A+    +TL+ A  SAE F++  L+  L  
Sbjct: 58  PRLVHNPDSDVHLIASLADRLERLETAGMDAVFVQHYTLDYAQQSAEDFVEHQLIGMLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
             ++ G   RFGK+ AGD   L++ GE +G   V +D++ + +  +  SS+ +R  L  G
Sbjct: 118 VAIVGGEDIRFGKNNAGDADALRRLGEAHGTDIVILDDVCDEHGGRRWSSTWVRDLLRAG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIR-----FR 231
           +V   A +LG    I  +V HG K GR LGFPTAN+  +    +  +GVYA         
Sbjct: 178 NVRKTAEILGRPHRIRGNVQHGFKRGRQLGFPTANLPGVGVGEIPADGVYAGWLVRTIPE 237

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKD 290
           TQ         + G NP         +E+ +       +YG+   + F DY+RP + F  
Sbjct: 238 TQATEHLPAAISIGTNPQFEGV-ERTVEAHVLGRSDLNLYGEEVAIDFIDYVRPMMSFDA 296

Query: 291 IEKLKIYMGEDEKKARKILESSYPLSER 318
           +E+L   M  D + A  IL  S P++ R
Sbjct: 297 VEQLLSQMDNDLRTAADIL--SVPVATR 322


>gi|27262322|gb|AAN87442.1| Riboflavin kinase [Heliobacillus mobilis]
          Length = 335

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 5/309 (1%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTI 62
             I  +  L    K   VA+GNFDG+HLGH  ++ + +K   A      V +F+PHP  +
Sbjct: 13  RTIIYDGPLDKGYKAVHVALGNFDGVHLGHQKLISEMVKKARARQGTAVVATFHPHPLQV 72

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            +  S    ++PP ++  ++ ++G   ++   F  E A+ S E+F QK+L+E L  ++V 
Sbjct: 73  TRPQSAPKIITPPDVKAALMGRLGVDIVLMLPFDAELASLSPEEFTQKILIEDLRAQSVT 132

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  + FG+   G   +L + G++ GF    ID +     + VSS+ IR++L  G +  A
Sbjct: 133 VGFNYSFGRGGKGTPQLLWELGQQKGFRVKVIDAV-TVSGEPVSSTLIRSSLEAGRIERA 191

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT-SYSG 240
           A  LGYR  ++  V+ G++ GR++GFPTAN+Q+ +   L   GVYA   R   +      
Sbjct: 192 AEFLGYRPILQGIVVPGDQRGRSIGFPTANLQVAAEQFLPARGVYAAWARVGQKEAESMA 251

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PT        +E+ + DF  ++YGQ  ++S   +LRPE++F+  E+L   +  
Sbjct: 252 VLNIGVKPTFGSGLAETIEAHLIDFEGDLYGQPLSLSLLSHLRPEMRFQSAEQLVEQIHR 311

Query: 301 DEKKARKIL 309
           D +  R   
Sbjct: 312 DVQAVRHYF 320


>gi|240146069|ref|ZP_04744670.1| riboflavin biosynthesis protein RibF [Roseburia intestinalis L1-82]
 gi|257201814|gb|EEV00099.1| riboflavin biosynthesis protein RibF [Roseburia intestinalis L1-82]
          Length = 309

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/298 (34%), Positives = 156/298 (52%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +  V+++G FDGIH GH L++E  A K        + +FN  PR  ++       L+   
Sbjct: 14  EPTVLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEA-KVLTTNE 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD
Sbjct: 73  EKMHIFEQIGIDYLVECPFTKEIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGD 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+   +KYG+  + ID+++ +K + +SS+ +R  + KG++  A HLLGY + +  ++
Sbjct: 132 YHMLKDLSDKYGYEVLVIDKMQEDK-RDISSTFVREEIAKGNIEKANHLLGYHYFVTGEI 190

Query: 197 IHGEKI-GRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG  +    LG PT N     + LL E GVY    R  D  SY GV N G  PT+    
Sbjct: 191 LHGRHLGSTKLGIPTINQIPPEEKLLPESGVYVTEVRLGD-RSYRGVTNVGVKPTIEGKN 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           P+ +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 250 PVGVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|302528529|ref|ZP_07280871.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
 gi|302437424|gb|EFL09240.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
          Length = 324

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 91/324 (28%), Positives = 146/324 (45%), Gaps = 13/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPH 58
           M           LP      VV IG FDG+H GH  ++++  A       P  VL+F+PH
Sbjct: 1   MTTVQRWRGLGDLPGGWGRCVVTIGVFDGVHRGHQELIKRTVATAAERGVPSVVLTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+    + +++E +G        FTLE +  S  +F+ +VLV+ L  
Sbjct: 61  PSEVLRPGSHPAQLTTLRRKAELVEGLGVDVFCVLPFTLELSRLSPHEFVHEVLVDRLHA 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGF-------HTVFIDELRNNKSQIVSSSNIR 171
             V+ G  F FG   AG+  +L++ G ++GF           +D+ R       SS+ +R
Sbjct: 121 AAVLVGDNFTFGAKAAGNVALLRELGRRFGFVAYGAELQGRSLDDDRGANDITFSSTYVR 180

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRF 230
           + +  G V+ AA  LG    +E  V+ G+  G  LG+PTAN+  +    +  +GVY   F
Sbjct: 181 SCIDAGDVVAAADALGRPHRLEGIVVRGDGRGHDLGYPTANLSTARFAAVPADGVYTAWF 240

Query: 231 RTQDQ--TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                         + G NPT        +E+F+ D  ++ YGQ   + F   LR + +F
Sbjct: 241 SRLSDPARRLRAAVSVGTNPTF-SGRERTVEAFVLDVDEDFYGQHVALDFVTRLRDQARF 299

Query: 289 KDIEKLKIYMGEDEKKARKILESS 312
                L   + ED  + R+ L S 
Sbjct: 300 GAPADLVKKIDEDVARTRQALGSD 323


>gi|325139654|gb|EGC62193.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis CU385]
 gi|325200895|gb|ADY96350.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           H44/76]
          Length = 318

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++    A+   + V++  F P P+        
Sbjct: 20  HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVTVVFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 313 EAARRW 318


>gi|325127583|gb|EGC50506.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis N1568]
          Length = 306

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+ V+ F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRFEADTRGLPVVVVIFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|23099057|ref|NP_692523.1| FMN adenylylate transferase [Oceanobacillus iheyensis HTE831]
 gi|22777285|dbj|BAC13558.1| riboflavin kinase : FMN adenylylate transferase (riboflavin
           biosynthesis) [Oceanobacillus iheyensis HTE831]
          Length = 313

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/301 (29%), Positives = 155/301 (51%), Gaps = 11/301 (3%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSS-SPIFT 71
             L   V AIG FDGIH GH  ++  A++          V++F+PHP  +++     I  
Sbjct: 15  EELPKTVSAIGFFDGIHQGHQKVITTAVREAEEKEMDSAVITFHPHPSVVLKKDTQQIQY 74

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           ++    ++ +L+++G   L    F  + +  S ++FI   +V  L +K ++ G  + FG 
Sbjct: 75  ITTLKEKQDVLQELGVDRLYIITFNEQLSKLSPQEFINHFIV-GLHIKHLVAGFDYSFGY 133

Query: 132 DRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              G+   +      K+ +  V   E  +   + +SS+ IR  L  G+V     LL   +
Sbjct: 134 KGKGNMNNISDYSNGKFTWQKV---EQVSLDEEKISSTRIRKELKAGNVDKVYQLLNRPY 190

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
                VI G + GR LG+PTAN+ +  D +L ++G+YA+    ++Q  Y G+AN G NPT
Sbjct: 191 QSAGMVIKGAQRGRELGYPTANIDVPNDSLLPRQGIYAVYVWVKNQ-RYEGMANIGTNPT 249

Query: 250 MVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              +   + +E +IFD+S ++YG+   + + +Y+RPE +F  +E L   M EDE++ R  
Sbjct: 250 FTEDRQDVSVEVYIFDYSNDLYGEELIIEWLNYVRPEERFDTVEALINGMKEDEQEIRSY 309

Query: 309 L 309
           L
Sbjct: 310 L 310


>gi|291538571|emb|CBL11682.1| riboflavin kinase/FMN adenylyltransferase [Roseburia intestinalis
           XB6B4]
          Length = 309

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/298 (34%), Positives = 156/298 (52%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +  V+++G FDGIH GH L++E  A K        + +FN  PR  ++       L+   
Sbjct: 14  EPTVLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEA-KVLTTNE 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD
Sbjct: 73  EKMHIFEQIGIDYLVECPFTREIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGD 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+   +KYG+  + ID+++ +K + +SS+ +R  + KG++  A HLLGY + +  ++
Sbjct: 132 YHMLKDLSDKYGYEVLVIDKMQEDK-RDISSTFVREEIAKGNIEKANHLLGYHYFVTGEI 190

Query: 197 IHGEKI-GRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG  +    LG PT N     + LL E GVY    R  D  SY GV N G  PT+    
Sbjct: 191 LHGRHLGSTKLGIPTINQIPPEEKLLPESGVYVTEVRLGD-RSYRGVTNVGVKPTIEGKN 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           P+ +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 250 PVGVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|325569962|ref|ZP_08145921.1| riboflavin biosynthesis protein RibF [Enterococcus casseliflavus
           ATCC 12755]
 gi|325156929|gb|EGC69098.1| riboflavin biosynthesis protein RibF [Enterococcus casseliflavus
           ATCC 12755]
          Length = 319

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M +    +   + ++P   +  V+ +G FDG+HLGH  ++E   KI       + +++FN
Sbjct: 3   MEIIEMRHPYDHATIPE--EEIVLVLGFFDGVHLGHQKVIETGRKIAEEKGLKLALMTFN 60

Query: 57  PHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
            HP  + Q   P  +  L+  + +E  +EK+G   L   +FT   AN + + F+ + ++ 
Sbjct: 61  QHPSIVFQKVDPEKMQYLTSLAQKEAHMEKLGVDILYIIEFTSAFANLAPQVFVDEYMI- 119

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  K V+ G  + +GK    +  +L     +  F  V + +  +   + VSS+ IR+AL
Sbjct: 120 GLHAKVVVAGFDYTYGKKEIANMALLPTY-AENRFEVVTVAQ-ESFDEEKVSSTRIRSAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ 233
             G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L KEGVY    +  
Sbjct: 178 QNGDMAQVNRLLGYIYEFEGTVVHGDARGRELGFPTANIKVKSTVRLPKEGVYVTEIKVG 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D   Y  + + G N T      L +E +I DF Q+IYG+   + +  +LR ++ F   + 
Sbjct: 238 D-KWYPSMGSIGHNDTFGQGRQLTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFNGAQA 296

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +DE+      +
Sbjct: 297 LIEQLKQDERDTETYFD 313


>gi|288802063|ref|ZP_06407504.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           D18]
 gi|288335498|gb|EFC73932.1| riboflavin biosynthesis protein RibF [Prevotella melaninogenica
           D18]
          Length = 297

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/293 (31%), Positives = 147/293 (50%), Gaps = 7/293 (2%)

Query: 30  IHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +H GH  ++ + I  A        V++F+ HPR ++Q+      LS    +  +L K   
Sbjct: 1   MHRGHQFLISRVIDEAKRSGMASAVITFDRHPRQVLQADYQPELLSTLDEKLLLLSKTHI 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
                  F    A  SA  F+Q+VL + L VK +I G   RFG +R+       + G++ 
Sbjct: 61  DNSFVLHFDTSLAALSAHDFMQEVLCKQLNVKKLIIGYDNRFGHNRSETFEDYVQYGKEM 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           G   +  D    N  + VSSS IR  L  G++  A  LLGY +TIES ++ G + GR +G
Sbjct: 121 GIEVIRADAFLPND-EKVSSSIIRNDLRTGNIEAANRLLGYPYTIESRIVSGYQNGRKMG 179

Query: 208 FPTANMQLSP--DILLKEGVYAIRFRTQDQTSYS-GVANFGRNPTMVPNGPLLLESFIFD 264
           FPTAN+ ++    +L   GVYA+  R +D   +  G+ N G  PT        +E  +F+
Sbjct: 180 FPTANLDVNGCQQLLPASGVYAVMVRLKDSVGWKRGMMNIGHRPTFN-GTTTSIEVNLFN 238

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           F+  +YGQ   VSF   +R E KF  +E L   + +D+++  ++ + +Y + E
Sbjct: 239 FTGNLYGQELLVSFISKIRDEHKFDSLEALAQQLKQDKEQINRLFDETYHIQE 291


>gi|108761824|ref|YP_633926.1| riboflavin biosynthesis protein RibF [Myxococcus xanthus DK 1622]
 gi|108465704|gb|ABF90889.1| riboflavin biosynthesis protein RibF [Myxococcus xanthus DK 1622]
          Length = 308

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 148/313 (47%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V+            L G  +A+GNFDG+H+GH  +  +A +          +FNPHP 
Sbjct: 1   MKVY---PAVADAGRALAGQALALGNFDGVHVGHQALFAEARRHGR---AAAFTFNPHPG 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++Q       ++    + ++ E++G  A +   F+ E A      F   +  + L V  
Sbjct: 55  KVLQPELAPKLITLLPRKLELFEELGLDAAVVQPFSREYARTPPADFEAALF-DALGVAH 113

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G+ F +G  R G    L++   + G  TV +         + SSS +R  + +G V 
Sbjct: 114 VVVGSDFTYGSARRGTAETLREAAARRG-ATVHVVPPVTVDGVVASSSRVREYILEGRVS 172

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ---TS 237
            A  LLG  F ++  V+ G   GR +GFPTAN+    ++    GVYAIR +   +   T 
Sbjct: 173 AARRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELRPAPGVYAIRVQLPGESKGTW 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + G AN G  PT      + +E+ + DF+ ++YG+   V F D LRPE +F  + +L   
Sbjct: 233 HGGAANIGVKPTF-GGTEVTIEAHLLDFTGDLYGKELRVQFLDRLRPEQRFGSVVELTGQ 291

Query: 298 MGEDEKKARKILE 310
           +  D + AR ++ 
Sbjct: 292 IKRDVEAARAVIA 304


>gi|270290308|ref|ZP_06196533.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici 7_4]
 gi|270281089|gb|EFA26922.1| riboflavin biosynthesis protein RibF [Pediococcus acidilactici 7_4]
          Length = 315

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 15/320 (4%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFN 56
           M +   H+    + +P   +  V+A+G FDG+H GH  ++++A +IA      +  ++F+
Sbjct: 1   MQIIKIHHPYDKKMIPE--EKVVLALGFFDGMHRGHQAVIQKAREIANAKGLALAAMTFD 58

Query: 57  PHPRTII----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
            H   +        S +  L+  S + +++E  G   L    FT    + + ++F+ + +
Sbjct: 59  HHASVVFPKPQHRFSALSYLTSVSRKAELMEATGVDILYVVNFTSAFGSLTPQEFVDQYM 118

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           V  L  + V+ G  + FG     +   L +   ++ F  V + ++   + Q + S+ IR 
Sbjct: 119 V-GLNAEVVVAGFDYTFGPVATANMDTLPEI-AQHRFEVVKVPKI-IAQGQKIGSTAIRN 175

Query: 173 ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFR 231
           A+  G +  A   LGY F     V+HGE  GRTLGFPTAN+      I    G+Y +  +
Sbjct: 176 AVADGEIDEANRYLGYPFETNGLVVHGEARGRTLGFPTANIVSNPNQITPGIGIYVVEIK 235

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
             D   Y G+A+ GRN       P+  E  I DF+QEIYG+   V +   LR E+KF  +
Sbjct: 236 IAD-KWYQGMASVGRNVVFGDGRPVTTEINILDFNQEIYGETVRVKWHHRLRGEVKFASV 294

Query: 292 EKLKIYMGEDEKKARKILES 311
           + L   + +DE   R   + 
Sbjct: 295 DALIAQLHQDEADTRAFFKK 314


>gi|293570604|ref|ZP_06681655.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E980]
 gi|291609275|gb|EFF38546.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E980]
          Length = 313

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       Q         V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQPEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   AN + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMADLGIDYLYEVDFTSSFANLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVTHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCIYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+   +     
Sbjct: 297 EQLKDDEQATAEYFSQQ 313


>gi|255326380|ref|ZP_05367464.1| riboflavin biosynthesis protein RibF [Rothia mucilaginosa ATCC
           25296]
 gi|255296597|gb|EET75930.1| riboflavin biosynthesis protein RibF [Rothia mucilaginosa ATCC
           25296]
          Length = 338

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 87/311 (27%), Positives = 153/311 (49%), Gaps = 9/311 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSP 68
             +P      VV IGNFDG+H GH  ++ + +     +      +SF+PHP  + +  + 
Sbjct: 8   SEVPAGYGPSVVTIGNFDGVHRGHARVISRVVSLAEEHGLSSIAVSFDPHPMQVHRPEAA 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              +     +   +  +G +  +   + LE A  + E+F++   V+ L  + V+ G   R
Sbjct: 68  HHDIMGQGSRRYFMCLLGLNDYLLLNYNLEFAAQTPEEFVKSTFVDALNARFVVIGDDVR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+ +GD   +++ GEKYGF  V +++L  +++   SS+ IR  L +G +  A  LLG 
Sbjct: 128 FGKNNSGDLNTMRELGEKYGFEVVVVEDLMVDENTRCSSTRIRQLLLEGDMPAATELLGR 187

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              +  +V+HG   GR LGFPTAN++L +  ++  +GVYA     +    +    + G N
Sbjct: 188 HHMMAGEVVHGLARGRELGFPTANLELEARGLIPADGVYAGWLVDESGNRHPSAISVGTN 247

Query: 248 PTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           PT        +E+ + D  +       +YGQR  + F   LRP + +  +E L   + +D
Sbjct: 248 PTFDGIEHRQVEAHVIDRPEERVEDFNLYGQRVLIEFVKRLRPMVAYTGVEALIEQINDD 307

Query: 302 EKKARKILESS 312
             + R++L   
Sbjct: 308 VVQTREVLAED 318


>gi|69246871|ref|ZP_00604163.1| Riboflavin kinase / FAD synthetase [Enterococcus faecium DO]
 gi|257882935|ref|ZP_05662588.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,502]
 gi|257884349|ref|ZP_05664002.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,501]
 gi|257889286|ref|ZP_05668939.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,410]
 gi|260560103|ref|ZP_05832281.1| riboflavin kinase/FAD synthetase [Enterococcus faecium C68]
 gi|261207409|ref|ZP_05922095.1| riboflavin kinase/FAD synthetase [Enterococcus faecium TC 6]
 gi|289566669|ref|ZP_06447086.1| riboflavin biosynthesis protein RibF [Enterococcus faecium D344SRF]
 gi|293556657|ref|ZP_06675222.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1039]
 gi|293560189|ref|ZP_06676691.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1162]
 gi|294613927|ref|ZP_06693862.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1636]
 gi|294621547|ref|ZP_06700713.1| riboflavin biosynthesis protein RibF [Enterococcus faecium U0317]
 gi|314937515|ref|ZP_07844848.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a04]
 gi|314942175|ref|ZP_07849029.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133C]
 gi|314947486|ref|ZP_07850901.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0082]
 gi|314951473|ref|ZP_07854522.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133A]
 gi|314992562|ref|ZP_07857980.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133B]
 gi|314995503|ref|ZP_07860603.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a01]
 gi|68195052|gb|EAN09515.1| Riboflavin kinase / FAD synthetase [Enterococcus faecium DO]
 gi|257818593|gb|EEV45921.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,502]
 gi|257820187|gb|EEV47335.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,501]
 gi|257825646|gb|EEV52272.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,231,410]
 gi|260073938|gb|EEW62262.1| riboflavin kinase/FAD synthetase [Enterococcus faecium C68]
 gi|260078300|gb|EEW66005.1| riboflavin kinase/FAD synthetase [Enterococcus faecium TC 6]
 gi|289161528|gb|EFD09411.1| riboflavin biosynthesis protein RibF [Enterococcus faecium D344SRF]
 gi|291593202|gb|EFF24776.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1636]
 gi|291598852|gb|EFF29903.1| riboflavin biosynthesis protein RibF [Enterococcus faecium U0317]
 gi|291601192|gb|EFF31479.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1039]
 gi|291605861|gb|EFF35293.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1162]
 gi|313590337|gb|EFR69182.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a01]
 gi|313592854|gb|EFR71699.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133B]
 gi|313596313|gb|EFR75158.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133A]
 gi|313599098|gb|EFR77943.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0133C]
 gi|313643156|gb|EFS07736.1| riboflavin biosynthesis protein RibF [Enterococcus faecium
           TX0133a04]
 gi|313646036|gb|EFS10616.1| riboflavin biosynthesis protein RibF [Enterococcus faecium TX0082]
          Length = 313

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       QS        V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + EDE+   +     
Sbjct: 297 EQLKEDEQATAEYFSQQ 313


>gi|311030083|ref|ZP_07708173.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           sp. m3-13]
          Length = 323

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 11/321 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V +    +           VA+G FDGIHLGH  +++ A+  + +      V++ +PH
Sbjct: 1   MKVVYLEHPHSLSKEECIPATVALGFFDGIHLGHQKVIKSALSKSKDLGVASAVMTLDPH 60

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++ +   +  ++P S + ++L  +G   L   KF +  A+   + F+ + ++  L 
Sbjct: 61  PSVVLRKTVQHVRYITPLSEKIRLLASLGVDILYVVKFDMSFASLVPQDFVDQYII-GLN 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K V+ G  + +G    G    L     +  F    +++   N    VSS+ IR  L +G
Sbjct: 120 IKHVVAGFDYSYGSLGKGTMETLPFHSRQQ-FDQTVVEKYTTND-LKVSSTFIREQLKEG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
            V +  + LG  + I   V HGEK GRT+GFPTAN+ L    ++ K GVY +R    D  
Sbjct: 178 KVSDLPNTLGRFYQIRGKVGHGEKRGRTIGFPTANVVLADDYVIPKTGVYTVRMNVND-R 236

Query: 237 SYSGVANFGRNPTMVPNGP---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            ++GV N G  PT           +E  + DF Q+IYG    + + D +R E KF  I+ 
Sbjct: 237 WFNGVCNVGYKPTFHKQEKESLPSIEVHLLDFDQQIYGAEVIIEWHDCIREEKKFSGIDA 296

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L   + +D+  A    + +  
Sbjct: 297 LVAQIRKDKGIAEDYFQKNLH 317


>gi|282860215|ref|ZP_06269288.1| riboflavin biosynthesis protein RibF [Prevotella bivia JCVIHMP010]
 gi|282586998|gb|EFB92230.1| riboflavin biosynthesis protein RibF [Prevotella bivia JCVIHMP010]
          Length = 318

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 7/310 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ 64
           + +N+    HL   V  IG FDG+H GH  ++E   +IA  +     V++F+ HPR ++ 
Sbjct: 4   LYLNKREQKHLTALVATIGFFDGVHRGHQFLIENVKRIAKQAGMQSAVITFDLHPRQVLH 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  LS    +   +E  G    I   F    +  SA++F+Q +L E L V+ ++ G
Sbjct: 64  PDQSPSLLSSLDQKLAHIEATGIDNCIVLHFDKALSQLSAKEFMQTILKEQLNVQKLVIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              +FG +R       Q+ G+K G   V    L +   + +SSS +R  +  G +  A H
Sbjct: 124 YDNKFGHNRTEGFEDYQRYGKKLGIEVVENMAL-DTADEHISSSVVRKHIKNGEIKAANH 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRT-QDQTSYSGV 241
            LGY +T+E  ++ G + G  LG+PTANM       +L  +GVYA++ +T   +T   G+
Sbjct: 183 DLGYIYTLEGKIVTGFQNGHKLGYPTANMDPKTCLQLLPADGVYAVKVKTDLSETWLDGM 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
              G  PT   N  L +E+ IF+F +E+YG    ++  D +R + KF+ +E L + +GED
Sbjct: 243 LYIGVRPTYNGNA-LCIETNIFNFDKELYGHNIKLALIDRVRDDKKFESLEALSLQLGED 301

Query: 302 EKKARKILES 311
           + K  +IL+ 
Sbjct: 302 KLKCEEILKD 311


>gi|302392344|ref|YP_003828164.1| riboflavin biosynthesis protein RibF [Acetohalobium arabaticum DSM
           5501]
 gi|302204421|gb|ADL13099.1| riboflavin biosynthesis protein RibF [Acetohalobium arabaticum DSM
           5501]
          Length = 307

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + +     + + +  +  V A+G FDGIH GH  ++++ I  A+  N    + SF PH
Sbjct: 1   MEIING----EEIKSETESVVAALGAFDGIHYGHQQLIDEVITTADRLNCKAALFSFKPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +++  S     ++    + +ILE++G   +   +FT + A    + F++  LV  + V
Sbjct: 57  PLSVVAPSKAPPLITSWKQKYRILEELGLDKVYLVEFTADFAKLDFKGFVRDYLVAGINV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG    GD   L+K G ++GF    ID +  +    VSS+ IR  +  G 
Sbjct: 117 HKVVVGEDFRFGYQGLGDTIKLKKLGAEFGFEVKVIDSVTIDNKV-VSSTYIRELIEAGR 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS 237
           +      L   ++IE  VI G+K GR LGFPTAN++ ++  I+ K GVYA+    +  T 
Sbjct: 176 LQEVKTYLTRNYSIEGKVIDGDKRGRELGFPTANLKPVADYIIPKSGVYAVYVYLEG-TK 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +G A+ G  PT   +  L +E  IFDF  +IY ++  V F + LR E++F   + L   
Sbjct: 235 MAGAAHVGSCPTFNQD-ELSIEVNIFDFDDDIYQEKIEVEFVEGLRSEMEFNSRDGLIKQ 293

Query: 298 MGEDEKKARKILE 310
           + +D  +A+ ILE
Sbjct: 294 IMKDIAEAKDILE 306


>gi|331082951|ref|ZP_08332071.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399946|gb|EGG79604.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 316

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
              V +G FDG H GH  ++E    K   N    + +F+  P    Q       L     
Sbjct: 15  RSAVTLGKFDGFHRGHQKLVECIKQKSGENCRTIIFTFD-LPYKAYQQKCMPKLLLTYEE 73

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++ E +    L    FT E  N   E F+++ LV+ L  + V  G+ F FG +R+G+ 
Sbjct: 74  KREVAEALYADILAECPFTEELMNMEPEVFVKEYLVDRLHAEYVAIGSDFHFGHNRSGNP 133

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L   GEKYGF    I++ R+ + + +SS+ IR  L +G +     LLGY + I+ +++
Sbjct: 134 EVLSALGEKYGFTVEIIEKERDGERE-ISSTYIREELEQGRMEKVQKLLGYPYFIKGEIV 192

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG ++GRT+G PTAN+   P   L   GVY  +        YSG+ N G  PT+  N  +
Sbjct: 193 HGRQLGRTIGVPTANLIPPPMKKLPPNGVYVTQSSVGG-KVYSGITNVGYKPTVKENF-I 250

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +E+++F  ++++YGQ   V F+ YLRPE KF  + +LK  +  D + AR   E  Y
Sbjct: 251 GVETYLFHCNEDLYGQEAEVRFYKYLRPEKKFDSLSELKTQLDIDVETARAFFEKEY 307


>gi|261393181|emb|CAX50799.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase
           (flavokinase) and FMN adenylyltransferase (FAD
           pyrophosphorylase; FAD synthetase)] [Neisseria
           meningitidis 8013]
          Length = 306

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVIFEPQPKEFFAALAG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|294775025|ref|ZP_06740554.1| riboflavin biosynthesis protein RibF [Bacteroides vulgatus PC510]
 gi|294451069|gb|EFG19540.1| riboflavin biosynthesis protein RibF [Bacteroides vulgatus PC510]
          Length = 295

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 7/297 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           +   V  IG FDG+H GH  ++ Q  ++   +     +++F  HPR +IQ++     LS 
Sbjct: 1   MPPSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVHPRQVIQTAYRPQLLSS 60

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           P+ + ++LE M         FT E + +SA +F+Q +      + T++ G   RFG +R+
Sbjct: 61  PTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQLLR-NKFNIHTLVIGYDHRFGHNRS 119

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +     + GE+   + V      + + + +SSS IR  L +G V  AA  LGY + ++ 
Sbjct: 120 ENFEDYCRYGEELNIYIVRARAYTDKEGK-ISSSVIRQLLKEGEVSQAAKFLGYNYYLDG 178

Query: 195 DVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
            V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    +    ++G+ N G  PT+  
Sbjct: 179 TVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEG-KKWAGMLNIGHRPTINN 237

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              L +E  I +FS+ IY +   + F  YLRPE K+  I+ L   M +D +K  +IL
Sbjct: 238 GNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALIAQMHKDREKTARIL 294


>gi|255658260|ref|ZP_05403669.1| riboflavin biosynthesis protein RibF [Mitsuokella multacida DSM
           20544]
 gi|260849571|gb|EEX69578.1| riboflavin biosynthesis protein RibF [Mitsuokella multacida DSM
           20544]
          Length = 312

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M  +  +    +L +     V+A+G FDG+H GH  I+ +A+++A+       V +F+ H
Sbjct: 1   MQFYSRL---TTLRDDFPRLVIALGMFDGVHRGHRSIISRAVELAHEIGGTSMVFTFSNH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    +S  +++ +++E +G   L+   FT + A  + E F+  +  +    
Sbjct: 58  PLAVLAPQAVPPQISNNALRRQLIEALGVDVLMAIPFTKDLARRTPEDFLALLR-DSFAP 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++TG  + FG    G   +LQ+ G  YGF       ++    + VSS+ IR  +  G 
Sbjct: 117 RILVTGPNYTFGSRGKGTHRLLQRVGSDYGFRAEICPAVQ-LGGRPVSSTRIRALIAGGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A   LG  FT+   VIHG++ GRTLGFPTAN+ +    ++L  GVYA     + +  
Sbjct: 176 LAAAEACLGRPFTVLDRVIHGDRRGRTLGFPTANLAIPDAQVMLPNGVYAATAHYEGRD- 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+ +AN G NPT        +E  I DFS++IY +   V F   +R E KF  ++ L   
Sbjct: 235 YAALANIGNNPTF-EGCNRRIEVNIQDFSEDIYDRLLEVRFLQKIREEEKFASVDALIAQ 293

Query: 298 MGEDEKKARKILESSY 313
           M +D ++A++I  + +
Sbjct: 294 MHKDRERAKEIWRNCF 309


>gi|257887091|ref|ZP_05666744.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,141,733]
 gi|257823145|gb|EEV50077.1| riboflavin kinase/FAD synthetase [Enterococcus faecium 1,141,733]
          Length = 313

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 86/317 (27%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       Q         V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQPEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMADLGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCIYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+   +     
Sbjct: 297 EQLKDDEQATAEYFSQQ 313


>gi|255021602|ref|ZP_05293645.1| Riboflavin kinase / FMN adenylyltransferase [Acidithiobacillus
           caldus ATCC 51756]
 gi|254968990|gb|EET26509.1| Riboflavin kinase / FMN adenylyltransferase [Acidithiobacillus
           caldus ATCC 51756]
          Length = 323

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 91/306 (29%), Positives = 141/306 (46%), Gaps = 10/306 (3%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
            H +  +   P   +   + IGNFDG+H GH  ++            +VL+F P PR   
Sbjct: 12  LHRLRRHAPQP---RATALTIGNFDGVHRGHQALITAMDGPVR----SVLTFEPLPREYF 64

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                   LS    +   L + G   +   +F    A+ SAE F++++L   L  ++V  
Sbjct: 65  HREQAPARLSSLREKASALSRTGVDEIYVARFDGALASLSAEDFVREILHRRLGAQSVHV 124

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG  R GD  +L + G + GF          +  + VSS+ IR  L  G +  AA
Sbjct: 125 GHDFRFGAGRRGDFDLLARMGRQLGFRVQEQPPFCLD-GERVSSTGIRQFLHAGKMDAAA 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
             LG  + I   V+ G++IGR LGFPTAN+ L+       G++A    T  + S+    +
Sbjct: 184 RWLGRPYAICGRVVGGDRIGRELGFPTANIDLARRPPPLRGIFAGVLHTP-RQSWPAAIS 242

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+     LLLE+   D + ++YGQR  V      R E  +  +++L   +G+D  
Sbjct: 243 IGLRPTV-GGKRLLLEAHCLDVTVDLYGQRVEVQLLHKWRDEAHYAQLDELIAAIGQDVA 301

Query: 304 KARKIL 309
           K R+  
Sbjct: 302 KTRQYF 307


>gi|332531434|ref|ZP_08407338.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hylemonella
           gracilis ATCC 19624]
 gi|332039103|gb|EGI75525.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Hylemonella
           gracilis ATCC 19624]
          Length = 372

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 100/359 (27%), Positives = 151/359 (42%), Gaps = 48/359 (13%)

Query: 1   MHVFHNIE----INQSLPNHLKG----GVVAIGNFDGIHLGHHLILEQAIKIANNSP--I 50
           M +F             P    G      V IGNFDG+H GH  +L      A       
Sbjct: 1   MKIFRGFHHPGLAGAPAPEESGGRPIGTAVTIGNFDGVHRGHQAMLALLRSEAEQRGMRS 60

Query: 51  TVLSFNPHPRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
            VL+F PHPR        +       +S    +   L + G   ++   F    +  S +
Sbjct: 61  CVLTFEPHPRDYFAAQARKPELAPARISTLRDKLADLRRAGIDQVVVLPFDSRLSTLSPQ 120

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT-------VFID-EL 157
            FI  VL+  L  + ++ G  FRFG  RAGD  +L   G+  GF         V +    
Sbjct: 121 AFIDDVLLRGLNTRYLLVGDDFRFGARRAGDYALLDAAGQAQGFDVARMNSYEVHVPGPT 180

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL----------- 206
               SQ VSSS +R AL +G + +AA LLG  + I   V+HG K+GR L           
Sbjct: 181 PGGASQRVSSSLVRAALAEGRMDDAAKLLGRPYHISGHVLHGRKLGRELGKNLGPNAPGG 240

Query: 207 --GFPTANMQLSPDILLKEGVYAIRFRTQ---DQTSYSGVANFGRNPTMVP----NGPLL 257
             GF T N++ +       G++A++        +    GVAN G  P++ P     G +L
Sbjct: 241 GQGFRTLNLRFAHWKPAASGIFAVQVHGLTSSAEAPLRGVANLGVRPSLDPSDVNGGRVL 300

Query: 258 LESFIFDFSQEI-----YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LE+ +FD+  E+     YG+   V     L  E+K+  ++ L+  + +D + AR    +
Sbjct: 301 LETHVFDWPAELGLEGGYGKIIRVELLHKLHDELKYDSLDALQAGIAQDCEHARAWFAT 359


>gi|15806031|ref|NP_294732.1| riboflavin kinase/FMN adenylyltransferase [Deinococcus radiodurans
           R1]
 gi|6458736|gb|AAF10583.1|AE001952_11 riboflavin kinase/FMN adenylyltransferase [Deinococcus radiodurans
           R1]
          Length = 297

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 13/292 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V+AIG+FDG+HLGH  +L Q    A     P  V +F+P  R ++Q    +  LS    
Sbjct: 15  TVIAIGSFDGVHLGHQALLAQLKARAREYRVPSVVYTFDPPTRVLMQG---VEFLSTLPE 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L   G    I   FT E A    E F+  +    ++ + V+ G  F FGK RAG  
Sbjct: 72  KLDLLRLYGIDETIAVPFTPEFAARPKEAFLADL--RAMKPRAVVVGEDFYFGKGRAGST 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++         V +  +       + S+ IR  L +G V  A  LLG  +  +  V+
Sbjct: 130 ADLREVCA----DVVSL-PMHQLGGDDIKSTRIRALLKEGDVDGAQRLLGRPYDAQGVVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G++IGRTLG+PTAN+++S    L  GV+A++        + G+AN G  PT+       
Sbjct: 185 RGDQIGRTLGWPTANLRVSEGKALPLGVFAVQVVNDKGERWGGMANVGWRPTV-EGRERR 243

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            E  +FD+  ++YG+   V F   LR E KF  +++LK  +G D + AR  L
Sbjct: 244 FEVHLFDYQGDLYGEELQVKFLSRLRGEQKFSGLDELKAQLGRDAEAARAAL 295


>gi|58617579|ref|YP_196778.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Gardel]
 gi|58417191|emb|CAI28304.1| Riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Gardel]
          Length = 306

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + ++   ++S  +      +  GNFDG+HLGH  I++    I    N    V++F PH
Sbjct: 1   MKIIYDYLNHESKVD----TAITFGNFDGVHLGHKAIIDTIRDIATKENLASAVVTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   +++    F L     + K+LE +G   L    F    +  S E FI+ VLV    +
Sbjct: 57  PSVYLRNKRG-FLLLDFDQKIKLLESLGIDYLYVINFDKNFSQLSPEVFIKDVLVNNYGM 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G    FG + +G+  +L      Y +    +D L  +   + SSS IR +L+ G 
Sbjct: 116 KHVIVGHNCSFGCECSGNIDLLYYYSIIYDYKVKKLDPLFVDN-ILCSSSVIRESLSNGK 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTS 237
           +  A  +LG  + I   VI G   GR +GFPT N+ +   ++ K GVYA      +  T 
Sbjct: 175 IKLANKILGRPYQINGKVIKGFVRGRVIGFPTVNINIGHVLVPKFGVYAASIEINNSNTW 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G+ N G  PT       +LE  IFDF+ +IY Q   +   +++RPE KF  +++LK  
Sbjct: 235 LHGIVNIGLRPTFNDIVFPILEMHIFDFNNDIYDQYVAIRLLEFIRPECKFDSVDQLKQQ 294

Query: 298 MGEDEKKARKIL 309
           +  D    ++IL
Sbjct: 295 INIDIVTVKQIL 306


>gi|296532264|ref|ZP_06895005.1| riboflavin biosynthesis protein RibF [Roseomonas cervicalis ATCC
           49957]
 gi|296267400|gb|EFH13284.1| riboflavin biosynthesis protein RibF [Roseomonas cervicalis ATCC
           49957]
          Length = 321

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 102/284 (35%), Positives = 142/284 (50%), Gaps = 2/284 (0%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           NFDG+HLGH  +L  A        +  L+F PHPR   +   P F L+  S +   L   
Sbjct: 35  NFDGVHLGHRAVLRAAHAGRPELKLAALTFEPHPREHFRPDDPPFRLTLASAKAAALGAA 94

Query: 86  GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
           G   +I   F    A   AE+F+ +VL   L  K +  G  F FG  R GD G L  R E
Sbjct: 95  GADIVIALPFDATLAAMPAEEFVTEVLHRGLGAKHLACGADFAFGHRRGGDVGFLAARAE 154

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT 205
             G     +  + +     +SSS IR AL  G+   AA  LG  + I   V HG+K GRT
Sbjct: 155 ALGIGLTVVPPVADEAG-PISSSRIRRALQDGYPERAAAALGRPWAITGVVSHGDKRGRT 213

Query: 206 LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF 265
           +GFPTAN+ L   +    GVYA+  R     +  GVAN G  PT+       +E+ +FD+
Sbjct: 214 IGFPTANVPLGRHLEPARGVYAVAVRLAGGATVPGVANIGLRPTV-GGSESRVEAHLFDY 272

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + ++YGQ  +V+   +LRPE KF  + +L   +G D   AR++L
Sbjct: 273 AGDLYGQEVSVALRHFLRPERKFAGLPELVAQIGADAAAARRLL 316


>gi|257898246|ref|ZP_05677899.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com15]
 gi|257836158|gb|EEV61232.1| riboflavin kinase/FAD synthetase [Enterococcus faecium Com15]
          Length = 313

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       Q         V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQPEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCIYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF   E+L 
Sbjct: 237 TWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVKVRWNQFLRDQVKFSSAEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + EDE+   +     
Sbjct: 297 EQLKEDEQATAEYFSQQ 313


>gi|306836340|ref|ZP_07469319.1| riboflavin biosynthesis protein RibF [Corynebacterium accolens ATCC
           49726]
 gi|304567775|gb|EFM43361.1| riboflavin biosynthesis protein RibF [Corynebacterium accolens ATCC
           49726]
          Length = 340

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 16/316 (5%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP 68
             +P  +    V IG FDG+H GH  ++   ++ A   N    +++F+PHP ++      
Sbjct: 11  DDIPADVGPTSVTIGVFDGLHRGHQQLVSACVEHARANNQVPVMVTFDPHPVSVFLPERA 70

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             ++     + ++ E+MG   ++   FT E        +++ +LV  L  + V+ G  F 
Sbjct: 71  PVSVVSFERRLELAEEMGIEMVLVIDFTKELEGVEPRPYVRDLLVGKLHAQHVVVGENFT 130

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG   +G    +++ GE++GF    I  L +     + S+ IR +L++G + +A   LG 
Sbjct: 131 FGAGASGTAEAMRQLGEEFGFSVDII-PLLDEDGVQICSTYIRQSLSRGAIESANWALGR 189

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS--------- 237
            FT+   V+ G   G   LGFPTAN      + +  +GVYA  F    ++          
Sbjct: 190 HFTVTGPVVRGAGRGGKELGFPTANQYFPDTVAIPADGVYAGWFIVHSESPLDGDMQPEV 249

Query: 238 -YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y+   + G NPT   +    +ESF+ D   ++YG   TV F  +LR  +KF  +++L  
Sbjct: 250 AYAAAISVGTNPTF-GDEERSVESFVLDRDADLYGYEATVKFVGHLRDMVKFHSVDELLE 308

Query: 297 YMGEDEKKARKILESS 312
            M +D   AR +L + 
Sbjct: 309 AMAQDVAAARTVLAAD 324


>gi|300087846|ref|YP_003758368.1| riboflavin biosynthesis protein RibF [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527579|gb|ADJ26047.1| riboflavin biosynthesis protein RibF [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 310

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 7/304 (2%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPI 69
            L    +   + IG FDG+HLGH  +L + ++ A  S +    ++F  HPR ++   S +
Sbjct: 9   ELAGRNQPTALTIGVFDGVHLGHQALLTETVRQATRSGLTPAAVTFTGHPRLVLGRHSEL 68

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+  + +  +L + G + +    F+ E A  SA  FI  +L+E+L ++ +I G  F  
Sbjct: 69  PHLTSLNQRLCLLRECGINHVATLTFSPELAELSASDFI-SLLLEYLSLRHLIIGPDFAL 127

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G+DRAGD   L +      F    I  +  +  + VSS+ IR A+    +     LLG  
Sbjct: 128 GRDRAGDADYLHRLSRAKEFDLTIIPPVIID-GERVSSTLIRRAMADSDMPRVRKLLGRC 186

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           F +E  VIHGE  G  L  PTAN++L +   L  +GVYA R    + T Y+ + N G  P
Sbjct: 187 FALEGRVIHGEGRGARLDIPTANLELEADQALPADGVYASRTTIGNVT-YASITNIGTRP 245

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T    G   +E+ I +F+ ++Y +   V+  + +RPE+KF   + LK  +  D  +A  I
Sbjct: 246 TFGT-GRRTVETHIMNFNGDLYDRGLEVAIIEQIRPELKFDSPDALKKQIQSDITQAGHI 304

Query: 309 LESS 312
           L  +
Sbjct: 305 LAKA 308


>gi|261407932|ref|YP_003244173.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. Y412MC10]
 gi|261284395|gb|ACX66366.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. Y412MC10]
          Length = 317

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 109/302 (36%), Positives = 160/302 (52%), Gaps = 8/302 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    +  V AIG FDG+HLGH  +L  A+     N  P  +++F PHP+ +I   S   
Sbjct: 15  VREAAEPKVAAIGQFDGLHLGHASVLSTAVNIARENGVPAALITFYPHPKDVIGKGSYEG 74

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P   ++++LE+MG   L   +F  E +  S E F++++L   L ++T + G  FRFG
Sbjct: 75  YLTPQPDKQQLLEQMGIDILYVVEFNKEFSQVSPEAFVEEMLFP-LNLQTAVVGFDFRFG 133

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              AGD   LQ+ GE      V +     +  + V SS+IR AL  G + +A   LG  +
Sbjct: 134 HKGAGDAVKLQELGEGK-MSVVTVPPFLVD-GEKVGSSSIRIALKTGQLSDANRWLGRNY 191

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNP 248
            I   V+HGEK GR +GFPTAN++L  P +    GVYA+R RT        GV N G  P
Sbjct: 192 HIRGTVVHGEKRGRKIGFPTANLELTDPFVAPALGVYAVRARTDKHYDWIPGVMNVGVKP 251

Query: 249 TMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T        + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +ARK
Sbjct: 252 TFHEGITEPIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARK 311

Query: 308 IL 309
           IL
Sbjct: 312 IL 313


>gi|291558567|emb|CBL37367.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SSC/2]
          Length = 312

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M   HN E  Q         VVA+G FDG+H GH LI ++ I+         V SF+  P
Sbjct: 1   MEYIHNTEQFQ-----FHNTVVALGKFDGMHKGHQLIFDELIQYKQLGYQAAVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++    +  +   + + K+L + G    I + FT E ++ S E F+ KVL+E   +K
Sbjct: 56  LNMLK-HKHMRVIYTTNEKIKLLARRGIDIYIEHPFTDEFSHLSPEDFVIKVLLEKTGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L   + +IVSS+ IR  L++G V
Sbjct: 115 VLVVGDDCGFGYKRQGNVELLERMSKEYDFKLIVIPKL-ELEGEIVSSTRIRHLLSEGKV 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  L+   F I   V+HG  +G   L  PTAN + L   +L   GVY  R   +D+T 
Sbjct: 174 EEANRLMEDPFMICGSVVHGNHMGAEVLQMPTANQIPLEDKLLPPNGVYVSRIHYKDETY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I DF + IY +   V    + RPE+KF  +E L   
Sbjct: 234 Y-GISNVGVKPTIEGKKHMGVETYILDFHKNIYHKEIEVELLCFKRPEMKFDSLESLSQQ 292

Query: 298 MGEDEKKARKILESSY 313
           M ED + AR+  +  Y
Sbjct: 293 MHEDAEFARRYAKEHY 308


>gi|241667172|ref|ZP_04754750.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254875724|ref|ZP_05248434.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254841745|gb|EET20159.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 305

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 166/313 (53%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  N+       ++     VAIG+FDG+HLGH  I+++ I+ A  + +   ++ F P 
Sbjct: 1   MKIITNLNKT----DNSLAKAVAIGSFDGVHLGHQAIIQKLIRTAKENNLVPYIMFFEPL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           +     +   L K+G   +I +KF    AN  A++FI++ LV  L  
Sbjct: 57  PKEFFLKEIAPTRIYDFRNKVINLNKLGVEHIICHKFNQRFANIEAKEFIEEFLVRKLNT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F+FGK+RAG+  +L++    + F    I  L N  +  +SSS IR A+ +  
Sbjct: 117 KHIIVGDDFKFGKNRAGNYSLLEQYSLTHDFTVDRISTL-NLDNHRISSSQIRQAIAEHD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  L+G    I S V+HG+K GR +GFPT N +L  + +LK GVY  +    DQ  +
Sbjct: 176 IQQANKLIGSSLKINSRVLHGQKNGRKIGFPTVNQKLLKNSVLK-GVYLSKIYIDDQVFF 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G++N G  PT+      LLE+ IF+F++ IYG+  T     ++RPE KF   ++LK  +
Sbjct: 235 -GISNAGTRPTI-DGKNSLLETHIFNFNEFIYGKHITTEIIGFIRPEKKFNSFDELKTQI 292

Query: 299 GEDEKKARKILES 311
            ED + A+K   +
Sbjct: 293 YEDVEIAKKYFSN 305


>gi|94985909|ref|YP_605273.1| riboflavin biosynthesis protein RibF [Deinococcus geothermalis DSM
           11300]
 gi|94556190|gb|ABF46104.1| riboflavin biosynthesis protein RibF [Deinococcus geothermalis DSM
           11300]
          Length = 303

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 91/298 (30%), Positives = 147/298 (49%), Gaps = 17/298 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            VVAIG+FDG+HLGH  +L Q          P  V +F+P  R + Q    +  LS    
Sbjct: 15  TVVAIGSFDGVHLGHQALLAQLKAKGREHKVPTVVYTFDPPTRVLTQG---VEFLSTLPE 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ++L + G    +   FT E A    E F+  +    L  ++++ G  F FGK RAG  
Sbjct: 72  KLELLARYGIDETVAVPFTPEFAARPKEAFLDDL--RALHPRSIVVGEDFHFGKGRAGGV 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++   +     V    +     + + S+ IR  L  G V  AA LLG  ++ +  V+
Sbjct: 130 ADLREVTRE-----VVALPMHQLGGEDIKSTRIRAYLAAGDVEGAARLLGRHYSAQGVVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ----DQTSYSGVANFGRNPTMVPN 253
            G+++GRT+G+PTAN+++     L  GV+A+   T+    +   + G+AN G  PT+   
Sbjct: 185 SGDRLGRTIGWPTANLRVPEGKALPLGVFAVVALTERGPHNVQRWHGMANVGWRPTVN-G 243

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                E  +FDF  ++YG+   + FF  LR E KF  +++L+  +  D + AR +L  
Sbjct: 244 TERRFEVHLFDFGGDLYGEELDIKFFARLRGEQKFSGLDELRAQLARDAEAARAVLRD 301


>gi|73667466|ref|YP_303482.1| FMN adenylyltransferase / riboflavin kinase [Ehrlichia canis str.
           Jake]
 gi|72394607|gb|AAZ68884.1| FMN adenylyltransferase [Ehrlichia canis str. Jake]
          Length = 305

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 97/311 (31%), Positives = 151/311 (48%), Gaps = 9/311 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M + +     +S        V+A GNFDG+HLGH  I+     I I  +    +++F PH
Sbjct: 1   MKIIYGYPSEKS----DLSSVLAFGNFDGVHLGHKSIINTVKNISIKEDVASAIITFAPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   +      F L     + ++L+      L    F    +  S + FI+ VLV    V
Sbjct: 57  PAEYLHGRKN-FLLLNFEQKIELLQSYEIDYLYIIDFNQSFSQLSPDDFIKDVLVSSCNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++TG    FG    G+  +L    + Y +  V I+ +  N   + SSS IR  L++G 
Sbjct: 116 KYIVTGHNCFFGYKCLGNVDLLYAYADIYNYEVVQINPVFINDDILCSSSLIRECLSEGK 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG  + I   VI G   GR +GFPT N+ +   +L K GVY+   +  + T++
Sbjct: 176 LDLANKILGRPYQISGKVIRGLARGRIIGFPTINVAI-EHMLPKVGVYSACVKINNTTTW 234

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +G+ N G  PT       +LE  IFDFS +IY Q  T+   D++RPE KF  +++LK  
Sbjct: 235 LNGIVNIGLRPTFGDLNVPILEMHIFDFSDDIYDQYVTIQLLDFIRPERKFDTVDQLKRQ 294

Query: 298 MGEDEKKARKI 308
           +  D  + +KI
Sbjct: 295 INNDIVQVKKI 305


>gi|255013020|ref|ZP_05285146.1| putative riboflavin biosynthesis protein RibF [Bacteroides sp.
           2_1_7]
          Length = 306

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +      L+    +
Sbjct: 16  VATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSSEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   RFG DR     
Sbjct: 76  LQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                G + G   +      +  +  VSSS IR  L  G+V  AA+LL Y + +   ++ 
Sbjct: 136 QYVVYGTECGIEVLKASPY-DEGNTAVSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVS 194

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLGFPTAN+++     ++   GVYA+    +    Y G+   G  PT+     +
Sbjct: 195 GYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEG-ERYKGMLYIGDRPTLNNGKDI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D      +L
Sbjct: 254 SMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL 306


>gi|293568129|ref|ZP_06679466.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1071]
 gi|291589211|gb|EFF21022.1| riboflavin biosynthesis protein RibF [Enterococcus faecium E1071]
          Length = 313

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++       QS        V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1   MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   P  +  L+    +E+ +  +G   L    FT   A+ + ++F+ + +V  L
Sbjct: 61  PSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  ++G  + +G     D     +  +   F  V + +    + + +SS+ IR  L  
Sbjct: 120 HAKYAVSGFDYTYGPKDIADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  AA LLG  + +E  V+HG+  GR LGFPTAN+++   + L KEGVY    +   +
Sbjct: 178 GQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GE 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T      L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L 
Sbjct: 237 IWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELI 296

Query: 296 IYMGEDEKKARKILESS 312
             + EDE+   +     
Sbjct: 297 EQLKEDEQATAEYFSQQ 313


>gi|295395378|ref|ZP_06805577.1| riboflavin biosynthesis protein RibF [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971700|gb|EFG47576.1| riboflavin biosynthesis protein RibF [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 316

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M V  + +    L        + +GNFDG+H+GH  +L   +++A+   +T   ++F+PH
Sbjct: 1   MEVIRSADEAAHL------CALTLGNFDGVHIGHQAVLRTLVRVADERGLTSLAMTFDPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       ++    + K +   G  A +   ++LE A+ SAE+FI+ +  + + V
Sbjct: 55  PVAVHRPDHKPQLITGLDEKLKRIAATGVDATLVQPYSLEFADQSAEEFIEFLARD-VGV 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF-IDELRNNKS-QIVSSSNIRTALTK 176
           + ++ G   RFG+   GD   LQ  G+++G  TV  ID+L + +    VSS++IR+ L  
Sbjct: 114 RAIVVGRDVRFGRGNEGDLATLQNLGQRHGVETVVAIDDLGDGEGLSRVSSTHIRSLLLD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G+V +AA +LG    +   V++G   GR +GFPTAN+      ++  +GVYA      D 
Sbjct: 174 GNVEDAARMLGRPHVVTGTVVNGNARGREMGFPTANIGGDVAGLIPSDGVYAGWVYFADG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDF---SQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               G  + G NPT   +    +E  +        ++YG+   V F  ++R +I+F  ++
Sbjct: 234 RQQPGAISVGSNPTFDGD-DRRVEVNVVGVEFPDMDVYGEPARVEFVAHIRGQIEFSGMD 292

Query: 293 KLKIYMGEDEKKARKILES 311
            L   M +D K    +LE+
Sbjct: 293 ALIEQMRDDVKNVSAVLEA 311


>gi|254673170|emb|CBA08029.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           alpha275]
          Length = 318

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|330685653|gb|EGG97294.1| riboflavin biosynthesis protein RibF [Staphylococcus epidermidis
           VCU121]
          Length = 323

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+ +Q +  ++    +A G FDG+H GH  + +       +      V++F+PH
Sbjct: 4   IEITHPIQDDQRINENV---AMAFGFFDGMHKGHDKVFQTLDQQAQSRGLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S +  ++        I   F+   AN ++E+FI++ +++   
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKIDMIASHDVDYCIVINFSSRFANVTSEEFIEEYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +L    E   F+T  + + +    + +S++ IR AL  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVL---NEVDSFNTTIVGK-QELDDEKISTTAIRDALQSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY + I+  V+ GEK GRT+GFPTAN+      +L K+GVYA+      +Q
Sbjct: 176 ELQKANEELGYLYKIKGTVVQGEKRGRTIGFPTANVHPSDDYLLPKKGVYAVSMEIGTEQ 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVVVYWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVEQMNDDKARAKYLLSVDF 315


>gi|150009685|ref|YP_001304428.1| putative riboflavin biosynthesis protein RibF [Parabacteroides
           distasonis ATCC 8503]
 gi|262383012|ref|ZP_06076149.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_33B]
 gi|149938109|gb|ABR44806.1| putative riboflavin biosynthesis protein RibF [Parabacteroides
           distasonis ATCC 8503]
 gi|262295890|gb|EEY83821.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 2_1_33B]
          Length = 306

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +      L+    +
Sbjct: 16  VATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   RFG DR     
Sbjct: 76  LQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                G + G   +      +  +  VSSS IR  L  G+V  AA+LL Y + +   ++ 
Sbjct: 136 QYVVYGTECGIEVLKASPY-DEGNTAVSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVS 194

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLGFPTAN+++     ++   GVYA+    +    Y G+   G  PT+     +
Sbjct: 195 GYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEG-ERYKGMLYIGDRPTLNNGKDI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D      +L
Sbjct: 254 SMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL 306


>gi|282877086|ref|ZP_06285928.1| riboflavin biosynthesis protein RibF [Prevotella buccalis ATCC
           35310]
 gi|281300768|gb|EFA93095.1| riboflavin biosynthesis protein RibF [Prevotella buccalis ATCC
           35310]
          Length = 321

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 8/300 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPS 76
             V  IG FDG+HLGH  ++ Q +K A ++ +   V++F+ HPR ++ S      L+   
Sbjct: 20  PCVATIGFFDGVHLGHQFLIRQVVKTARDAGLSSMVITFDKHPRQVLHSHYVPELLTTTE 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++L       ++   FT E AN +A+QF+  VL   L+V+ ++ G   RFG +R   
Sbjct: 80  QKLQLLSATAVDQVVVLPFTQEMANMTAQQFMGNVLHRRLQVRKLVIGYDNRFGHNREEG 139

Query: 137 RGILQKRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                  G   G   +  +E      +  VSSS IR  + +G +  A   LG  + + + 
Sbjct: 140 FDDYVCYGRALGIEVIRSEEFSLIKDAVHVSSSAIRKYIHEGSMEQANRCLGRPYVLTAH 199

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMVP 252
           V+ G K GR LGFPTAN+ LS    +L   GVYA++ + +     Y  + + G  PT   
Sbjct: 200 VVDGCKEGRKLGFPTANLNLSEITQLLPAMGVYAVKAQVEGTGPWYRAMTSIGMRPTYN- 258

Query: 253 NGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              L +E+ I + F + IY ++ +V+FF  LR E +F  +  L   + ED ++       
Sbjct: 259 GTSLTIETHILEGFHENIYDKQLSVAFFKRLRDEKRFDSLALLHAKIAEDAREVDSYFNK 318


>gi|68171902|ref|ZP_00545225.1| Riboflavin kinase / FAD synthetase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658244|ref|YP_507846.1| riboflavin biosynthesis protein RibF [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998677|gb|EAM85406.1| Riboflavin kinase / FAD synthetase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599701|gb|ABD45170.1| riboflavin biosynthesis protein RibF [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 317

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/327 (31%), Positives = 153/327 (46%), Gaps = 15/327 (4%)

Query: 1   MHVFHNIEINQSLPNHLKG--GVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M + +        PN       V+A GNFDGIHLGH  I+     I         V++F+
Sbjct: 1   MKIIYGY------PNQKGNVNSVLAFGNFDGIHLGHQSIINAIKNISVREKITSVVITFS 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP   +++    F L     + ++L+  G   L    F    A  S + FI+ VLV   
Sbjct: 55  PHPAEYLRNKQN-FLLLDLEQKIELLQSYGIDYLYIIDFNESFAQLSPDAFIKDVLVNSC 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +K ++ G    FG    G+  +L      Y +  V ID +  N     SSS IR  L++
Sbjct: 114 RIKYIVVGHSCFFGHKCLGNIDLLYSYANIYDYEIVRIDPIFINDKLC-SSSLIREYLSE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY-AIRFRTQDQ 235
           G V  A+ +LG  + I   VI G   GR +GFPT N+ +   ++ + GVY A      + 
Sbjct: 173 GKVDLASKILGRPYQINGKVIKGLARGRVIGFPTVNVDIKHILVPRVGVYSACIKIDDNN 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              +G+ N G  PT       +LE  IFDF  +IY Q   +   D++RPE KF  IE+LK
Sbjct: 233 VWLNGIVNIGFRPTFNDLSFPILEMHIFDFDSDIYNQHVAIQLLDFIRPERKFSSIEQLK 292

Query: 296 IYMGEDEKKARKILESSYPLSERDRII 322
             + ED  + +K L+  Y  S+ D ++
Sbjct: 293 QQINEDIIQVKKSLK--YIGSKDDEVV 317


>gi|239636250|ref|ZP_04677252.1| riboflavin biosynthesis protein RibF [Staphylococcus warneri
           L37603]
 gi|239597605|gb|EEQ80100.1| riboflavin biosynthesis protein RibF [Staphylococcus warneri
           L37603]
          Length = 323

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + + H I+ +Q +  ++    +A G FDG+H GH  + +       +      V++F+PH
Sbjct: 4   IEITHPIQEDQRINENV---AMAFGFFDGMHKGHDKVFQTLDQQAQSRGLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S +  ++        I   F+   AN ++E+FI++ +++   
Sbjct: 61  PSVVLNPERKRTTYLTPLSDKIDMIASHDVDYCIVINFSSRFANVTSEEFIEEYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +L    E   F+T  + + +    + +S++ IR AL  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVL---NEVDSFNTTIVGK-QELDDEKISTTAIRDALQNG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY + I+  V+ GEK GRT+GFPTAN+      +L K+GVYA+      +Q
Sbjct: 176 ELQKANEELGYLYKIKGTVVQGEKRGRTIGFPTANVHPSDDYLLPKKGVYAVSMEIGTEQ 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF + IYG+R  V +  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANVGVKPTFHDPAKAEVVIEVNIFDFDENIYGERVVVYWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVEQMNDDKARAKYLLSVDF 315


>gi|37519786|ref|NP_923163.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
 gi|35210777|dbj|BAC88158.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
          Length = 302

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 156/313 (49%), Gaps = 13/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M VF ++              VA+GNFDG+HLGH  +++  +        TVL+F+PHPR
Sbjct: 1   MAVFRSLS------EVATPCAVALGNFDGVHLGHQAVIQAVL--GRAGIPTVLTFDPHPR 52

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 +  F L+P   +   +  +G + ++   F    A   A  F+++VLV  L  + 
Sbjct: 53  EYFTGKTG-FLLAPERERTAAILALGIAQVLVLPFDELLAATEAGAFVEQVLVAGLGARF 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V  G  FRFGK+RAG   +LQ       F    + E R  + + VSSS IR AL  G + 
Sbjct: 112 VSVGWNFRFGKERAGTTEMLQSYARAGAFDIEILAE-RQVRGRRVSSSVIREALGCGDLD 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS 239
            A  LLG  + +E +V+ G++ GR LGFPTAN+Q+S    L K+GVY +  R   Q  + 
Sbjct: 171 LARLLLGRAYGLEGEVVRGDQRGRLLGFPTANLQVSGRKFLPKDGVYLVSARWGVQQRW- 229

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+ N G  PT        +E  + D+  ++YGQ   ++   YLRPE KF    +L   + 
Sbjct: 230 GLLNLGLRPTF-DGLKRTIEVHVLDWEGDLYGQHIKITLERYLRPEQKFGSPGELVAQLH 288

Query: 300 EDEKKARKILESS 312
            D + A K +  +
Sbjct: 289 RDREAALKEIAGN 301


>gi|167766528|ref|ZP_02438581.1| hypothetical protein CLOSS21_01034 [Clostridium sp. SS2/1]
 gi|317498928|ref|ZP_07957211.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711651|gb|EDS22230.1| hypothetical protein CLOSS21_01034 [Clostridium sp. SS2/1]
 gi|316893761|gb|EFV15960.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 312

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M   HN E  Q         VVA+G FDG+H GH LI ++ I+         V SF+  P
Sbjct: 1   MEYIHNTEQFQ-----FHNTVVALGKFDGMHKGHQLIFDELIQYKQLGYQAAVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++    +  +   + + K+L + G    I + FT E ++ S E F+ KVL+E   +K
Sbjct: 56  LNMLK-HKHMRVIYTTNEKIKLLARRGIDIYIEHPFTDEFSHLSPEDFVIKVLLEKTGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L   + +IVSS+ IR  L++G V
Sbjct: 115 VLVVGDDCGFGYKRQGNVELLERMSKEYDFKLIVIPKL-ELEGEIVSSTRIRHLLSEGKV 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  L+   F I   V+HG  +G   L  PTAN + L   +L   GVY  R   +D+T 
Sbjct: 174 EEANRLMEDPFMICGSVVHGNHMGAEVLQMPTANQIPLEDKLLPPNGVYVSRIHYKDETY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I DF + IY +   V    + RPE+KF  +E L   
Sbjct: 234 Y-GISNVGVKPTIEGKKHMGVETYILDFHKNIYHKEIEVELLCFKRPEMKFDSLESLSQQ 292

Query: 298 MGEDEKKARKILESSY 313
           M ED + AR   +  Y
Sbjct: 293 MHEDAEFARSYAKEHY 308


>gi|167746751|ref|ZP_02418878.1| hypothetical protein ANACAC_01463 [Anaerostipes caccae DSM 14662]
 gi|167653711|gb|EDR97840.1| hypothetical protein ANACAC_01463 [Anaerostipes caccae DSM 14662]
          Length = 310

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 11/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHP 59
           M   H  E  Q          VA+G FDG+H GH LI +Q ++         V SF+  P
Sbjct: 1   MEYIHQTENFQ-----FHNSAVALGKFDGLHRGHQLIFDQLLEYKKQRYQTVVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              ++S +    +     +E++L K G   LI + FT E +  S   F+ +VL++ + +K
Sbjct: 56  VNTLKSENYH-MIYSKEEKERLLAKKGMDVLIEHPFTKEFSKLSPRDFVTEVLIKKVGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L  N   IVSSS IR+ L +  +
Sbjct: 115 ILVVGDDCGFGYKRQGNVELLKEMQKEYDFKLIVIPKLELNGG-IVSSSRIRSLLREARI 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  LL   F +   V+ G  +G+  LG PTAN +     +L   GVY  R   ++Q  
Sbjct: 174 EEANSLLSSPFLVYGPVVQGNHMGKDILGVPTANQIPNPEKLLPPNGVYVSRITIKNQVY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I DF + IY +  +V    + RPE+KF+ ++ L   
Sbjct: 234 Y-GISNIGVKPTIEGKKHMGVETYILDFDKNIYHKPISVELLCFKRPEMKFESLDCLSRQ 292

Query: 298 MGEDEKKARKI 308
           M ED   AR  
Sbjct: 293 MKEDALFARDW 303


>gi|15677670|ref|NP_274831.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis MC58]
 gi|7227089|gb|AAF42169.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           MC58]
 gi|316984443|gb|EFV63416.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           H44/76]
          Length = 306

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQ---S 65
            + P+  +G  V IGNFDG+HLGH  IL++    A+   + V++  F P P+        
Sbjct: 8   HNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVTVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQ   V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQGLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKARKI 308
           + AR+ 
Sbjct: 301 EAARRW 306


>gi|323343808|ref|ZP_08084035.1| riboflavin biosynthesis protein RibF [Prevotella oralis ATCC 33269]
 gi|323095627|gb|EFZ38201.1| riboflavin biosynthesis protein RibF [Prevotella oralis ATCC 33269]
          Length = 317

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 96/314 (30%), Positives = 143/314 (45%), Gaps = 7/314 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTI 62
             I  N          V  IG FDG+H GH  ++E+             V++F+ HPR I
Sbjct: 2   KTIRFNLDNQPLQTPRVATIGFFDGVHRGHQYLIERVKAEAATAQMASAVITFSCHPRQI 61

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           + S      L+    +   L K      I   F  + A  SA  F++K+L + L+V+ +I
Sbjct: 62  LHSEYVPELLTTLDGKLIQLAKTKVDETIVLNFDKDMAALSARDFMEKILRDRLDVRKLI 121

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G   RFG +R+       + G + G   +       +    VSSS IRT L +G V  A
Sbjct: 122 IGYDNRFGHNRSEGFEDYARYGNELGIEVIRHPAFMLH-GVNVSSSVIRTFLHQGEVEMA 180

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRT-QDQTSYS 239
           A  LGY +TI   V+ G + GR +GFPTAN+  S    ++   GVYA++ R  Q   +  
Sbjct: 181 ALCLGYPYTISGKVVPGVQEGRKIGFPTANLDTSHYGQLIPANGVYAVKARLEQSIATLP 240

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G  PT      + LE+ I +FS ++YG+  +VSF   +R E KF   + L   + 
Sbjct: 241 AMMNIGMRPTFN-GTDITLETHILNFSDDLYGKTLSVSFMHRIREEQKFDSPQDLMKQLQ 299

Query: 300 EDEKKARKILESSY 313
            D K   +  E   
Sbjct: 300 YDRKMVVEQFEKDQ 313


>gi|193214947|ref|YP_001996146.1| riboflavin biosynthesis protein RibF [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088424|gb|ACF13699.1| riboflavin biosynthesis protein RibF [Chloroherpeton thalassium
           ATCC 35110]
          Length = 326

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/318 (28%), Positives = 157/318 (49%), Gaps = 15/318 (4%)

Query: 1   MHV-------FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--T 51
           M +       F++ E N  +        V IG++DG+HLGH  IL + +K A    +   
Sbjct: 1   MQIILFRHGDFYDWETNTQVNFDAVRSAVTIGSYDGVHLGHRAILARLVKSAKKQGLRSV 60

Query: 52  VLSFNPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
           +++F PHPR +++      +  ++    ++ +L  +G   ++  +F    +   A+ F++
Sbjct: 61  LITFEPHPRLVLRREKKRQLKLITTFEEKKSLLAPLGLDVVLVLEFDKAFSEIPAQTFVK 120

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +LV+ + +  ++ G    FGKDR G    L    + YGF      E   +  + VSS+ 
Sbjct: 121 DILVKRVGLADIVIGYDHNFGKDRQGTIETLNSLSQLYGFTVEETAEQLVH-GKHVSSTI 179

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYA 227
           IR  L  G +    HLLG  F +   V+ G K+GRT+GFPT N++L+    ++ K GVY 
Sbjct: 180 IRGLLEAGEIDEVNHLLGRPFRLTGKVVEGFKVGRTIGFPTVNLELTNPYKLIPKSGVYV 239

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
                     Y  + N G  PT+     L +E+ I +F +++YGQ  + +    +R EIK
Sbjct: 240 GDVSING-VCYRSMMNIGFKPTVTNEHKLSIEAHILNFDKDLYGQTLSFALIYRIRDEIK 298

Query: 288 FKDIEKLKIYMGEDEKKA 305
           F +++ LK  +  D++ A
Sbjct: 299 FVNLQALKTQLESDKRVA 316


>gi|325201520|gb|ADY96974.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           M01-240149]
 gi|325207499|gb|ADZ02951.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           NZ-05/33]
          Length = 306

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSS- 67
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+    S + 
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFASRTG 67

Query: 68  --PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RVPPCRISPLRTKLELLEGTGCIDAVWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|296129363|ref|YP_003636613.1| riboflavin biosynthesis protein RibF [Cellulomonas flavigena DSM
           20109]
 gi|296021178|gb|ADG74414.1| riboflavin biosynthesis protein RibF [Cellulomonas flavigena DSM
           20109]
          Length = 336

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 23/330 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V+  +     +P      VV +GNFDG+H GH  +L + +    A  +    ++F PH
Sbjct: 1   MQVWTEV---SQVPTGWGPSVVTLGNFDGVHRGHVAVLRRMVDDARAAGAHAVAVTFTPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L     + ++LE  G  A++   +TL+ A  + ++F+++ LV  L  
Sbjct: 58  PAQVHRPHDAPPLLLGDRDRIELLEATGLDAVLLVTYTLDFARQTPQEFVERYLVGALRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-------QIVSSSNIR 171
           +TV+ G   RFG   +GD   ++  GE+YGF    I ++R +++       +  SS+ +R
Sbjct: 118 RTVVVGRDVRFGWQNSGDLSTMRGLGEQYGFDVEVIADVRPDETPDAGPAHRRWSSTWVR 177

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
             L  G V  AA +LG    +   V+HG+  GR LG+PTAN+  +  ++  +GVYA   R
Sbjct: 178 ELLVAGDVRAAADVLGRPHRVRGVVVHGDARGRELGYPTANLGATTGLVPADGVYAGWLR 237

Query: 232 ---------TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDY 281
                               + G NPT        +E+++ D    ++YG+   +   + 
Sbjct: 238 REHRPDGTPVGQDRVLPAAVSIGTNPTF-EGRERRVEAYVLDRTDLDLYGEEVVLELVER 296

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LRP ++F  +++L   M  D +  R++L +
Sbjct: 297 LRPTLRFDSVDELLARMAVDVEDVRRVLGA 326


>gi|325141638|gb|EGC64100.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           961-5945]
          Length = 306

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 15/306 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKARKI 308
           + A++ 
Sbjct: 301 EAAKRW 306


>gi|257469721|ref|ZP_05633813.1| FMN adenylyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317063953|ref|ZP_07928438.1| riboflavin kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313689629|gb|EFS26464.1| riboflavin kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 318

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 105/325 (32%), Positives = 163/325 (50%), Gaps = 12/325 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + ++I              VAIG FDGIH GH  ++E A++ A   N    V +F  H
Sbjct: 1   MKIINDI---FDTKEQFHNSYVAIGTFDGIHYGHQQLIEAAVEKAKENNGISVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  II +S     ++    +  ILE MG   LI   F  + A+ +A +F++ +  + ++ 
Sbjct: 58  PMEIIDASKTPKCINTLEEKIYILESMGIDYLILQPFNKKFADLTAVEFVEILKKD-VDS 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FG+        L + GE  G     I  +  +  QI+SS+ IR ++ +G 
Sbjct: 117 KEIFVGFNFSFGEGGKAKTKDLIEIGESMGIKVNEIPAVTIDD-QIISSTLIRKSIQRGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQT 236
                  LG++F I  +VIHG+KI R LGFPTAN++LS  +    G+Y   ++   +D  
Sbjct: 176 FEKVNRYLGHQFLIIGEVIHGKKIARQLGFPTANIKLSNRLYPPFGIYGAMVKIEGEDIE 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT+ P G   +E  I DF  +IYG++  V    ++R E KF  +++LK 
Sbjct: 236 RY-GVVNIGVNPTLKP-GERSVEVHILDFDGDIYGKKIYVEIMKFMRDEKKFNSVDELKQ 293

Query: 297 YMGEDEKKARKILESSYP-LSERDR 320
            +G D K  +  ++      S +DR
Sbjct: 294 VIGNDVKNWQNFVKVRKNGYSSKDR 318


>gi|320094035|ref|ZP_08025859.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319979040|gb|EFW10559.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 329

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M ++H++     +P   +  VV IGNFDG+H GH  ++   ++ A    +    ++F+PH
Sbjct: 1   MRIWHSL---AEIPGAQR-SVVTIGNFDGMHNGHKKVVSTCVERARRRGVDAVAITFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +  + +  +SP   +   +   G  A++   + +   +   ++FIQ+ +V+ +  
Sbjct: 57  PLQVHKPEAGVQLISPLRDRLDAMAAAGLDAVLVAHYDVNLYSMEPDEFIQEYVVDRMGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  FRFG+  AG    L+  G   GF  V + ++   + +  SSS +R+ L +G 
Sbjct: 117 VEVVVGEDFRFGRANAGTIDTLRDLGRGLGFDVVMVTDIEAPEGRRWSSSWVRSLLAEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR-----T 232
           V  AA +LG+   I   V HG K GR LGFPTAN+      ++  +GVYA         T
Sbjct: 177 VAGAARVLGHLHRIRGTVEHGFKRGRALGFPTANLASGIEGVVPGDGVYAGWLVRNVPGT 236

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDI 291
                     + G NP         +E+ +       +YG+R  V+F   +RP + F  +
Sbjct: 237 LSAEFLPAAISVGTNPQF-GATERTVEAHVLGRSDLNLYGERIAVTFVSRIRPMLAFSSL 295

Query: 292 EKLKIYMGEDEKKARKIL 309
           E+L   M +D ++   +L
Sbjct: 296 EELLAQMDDDLRQTASVL 313


>gi|269213796|ref|ZP_05982870.2| riboflavin biosynthesis protein RibF [Neisseria cinerea ATCC 14685]
 gi|269145391|gb|EEZ71809.1| riboflavin biosynthesis protein RibF [Neisseria cinerea ATCC 14685]
          Length = 306

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
              P+  +G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HDAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|283781606|ref|YP_003372361.1| riboflavin biosynthesis protein RibF [Pirellula staleyi DSM 6068]
 gi|283440059|gb|ADB18501.1| riboflavin biosynthesis protein RibF [Pirellula staleyi DSM 6068]
          Length = 310

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 8/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +F      + LP  L  G V IGNFDG+H GH  +LE+    A     P  V +F+PH
Sbjct: 1   MQLFRT---ARDLPESLLHGAVTIGNFDGVHRGHAALLERLKAQAERVGGPAIVFTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++ S     L+    + ++L  +G SA+I Y   L   + +A +F + +L + L  
Sbjct: 58  PVRLLRPSETPPPLTWTDRKAELLFDLGVSAVISYPTDLALLSLTAGEFFESILRQTLAA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G  F FGK R G+   L K  E  G     ++        IVSSS +R  +  G+
Sbjct: 118 RAVVEGPNFYFGKGREGNVHTLAKLCESAGMTFEVVEP-TIEAGAIVSSSRVRQLIVDGN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A+ LL   + I   V HG + G  +GFPTAN+     +L K GVYA R     Q ++
Sbjct: 177 VGEASQLLTRPYRIRGMVTHGAQRGSKIGFPTANVDAIDTLLPKLGVYAARA-ITSQGTF 235

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +   N G NPT   +    +E+ +  FS  +YGQ   + F  +LR    F  I+ LK  +
Sbjct: 236 AAALNLGPNPTFGEHAT-KVEAHLLGFSGSLYGQPIELDFLAHLRDIRPFASIDALKQQL 294

Query: 299 GEDEKKARKILE 310
             D    + I+ 
Sbjct: 295 ALDVAATQAIVA 306


>gi|257865916|ref|ZP_05645569.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC30]
 gi|257872249|ref|ZP_05651902.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC10]
 gi|257875543|ref|ZP_05655196.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC20]
 gi|257799850|gb|EEV28902.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC30]
 gi|257806413|gb|EEV35235.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC10]
 gi|257809709|gb|EEV38529.1| riboflavin kinase/FAD synthetase [Enterococcus casseliflavus EC20]
          Length = 319

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 156/317 (49%), Gaps = 13/317 (4%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M +    +   + ++P   +  V+ +G FDG+HLGH  ++E   KI       + +++FN
Sbjct: 3   MEIIEIRHPYDHAAIPE--EEIVLVLGFFDGVHLGHQKVIETGRKIAEEKGLKLALMTFN 60

Query: 57  PHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
            HP  + Q   P  +  L+    +E  +E++G   L   +FT   AN + + F+ + ++ 
Sbjct: 61  QHPSIVFQKVDPEKMQYLTSLPQKEAHMEQLGVDILYIIEFTSAFANLAPQVFVDEYMI- 119

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  K V+ G  + +GK    +  +L    E   F  V + +  +   + VSS+ IR+AL
Sbjct: 120 GLHAKVVVAGFDYTYGKKEIANMALLPTYAEGR-FEVVTVAQ-ESFHEEKVSSTRIRSAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ 233
             G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L KEGVY    +  
Sbjct: 178 QNGDMAQVNRLLGYIYEFEGTVVHGDARGRELGFPTANIKVKSTVRLPKEGVYVTEIKVG 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D   Y  + + G N T      L +E +I DF Q+IYG+   + +  +LR ++ F   + 
Sbjct: 238 D-KWYPSMGSIGHNDTFGQGRQLTVEIYILDFHQDIYGETVAIRWHHFLRDQVAFNGAQA 296

Query: 294 LKIYMGEDEKKARKILE 310
           L   + +DE+      +
Sbjct: 297 LIEQLKQDERDTEAYFD 313


>gi|323171443|gb|EFZ57090.1| riboflavin biosynthesis protein RibF [Escherichia coli LT-68]
 gi|332762254|gb|EGJ92521.1| riboflavin biosynthesis protein RibF [Shigella flexneri 2747-71]
 gi|332764866|gb|EGJ95094.1| riboflavin biosynthesis protein RibF [Shigella flexneri K-671]
          Length = 273

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +L+   +     N P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKL 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L + G   ++  +F    A  +A+ FI  +LV+ L VK +  G  FRFG  R GD  +
Sbjct: 62  RYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           LQK G +YGF               +SS+ +R AL   ++  A  LLG+ F I   V+HG
Sbjct: 122 LQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +++GRT+GFPTAN+ L   +   +GVYA+      +    GVAN G  PT+       LE
Sbjct: 181 DELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGI-RQQLE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDY 281
             + D + ++YG+   V     
Sbjct: 240 VHLLDVAMDLYGRHIQVVLRKK 261


>gi|57239540|ref|YP_180676.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579525|ref|YP_197737.1| riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161619|emb|CAH58547.1| riboflavin kinase/FAD synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418151|emb|CAI27355.1| Riboflavin biosynthesis protein ribF [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 306

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 9/312 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + ++   ++S  +      +  GNFDG+HLGH  I++    I    N    V++F PH
Sbjct: 1   MKIIYDYLNHESKVD----TAITFGNFDGVHLGHKAIIDTIRNIATKENLASAVVTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++ +   F L     + K+LE +G   L    F    +  S E FI+ VLV    +
Sbjct: 57  PSVYLR-NKHGFLLLDFDQKIKLLESLGIDYLYVINFDKNFSQLSPEVFIKDVLVNNCGM 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G    FG + +G+  +L      Y +    +D L   ++ + SSS IR +L+ G 
Sbjct: 116 KHVIVGHNCSFGCECSGNIDLLYYYSIIYDYKVKKLDPLFV-ENILCSSSVIRESLSNGK 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTS 237
           +  A  +LG  + +   VI G   GR +GFPT N+ +   ++ K GVYA      +  T 
Sbjct: 175 IKLANKILGRPYQVNGKVIKGFVRGRVIGFPTVNINIGHVLVPKFGVYAASIEINNSNTW 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             G+ N G  PT       +LE  IFDF+ +IY Q   +   +++RPE KF  +++LK  
Sbjct: 235 LHGIVNIGLRPTFNDIVFPILEMHIFDFNNDIYDQYVAIRLLEFIRPECKFDSVDQLKQQ 294

Query: 298 MGEDEKKARKIL 309
           +  D    ++IL
Sbjct: 295 INIDIVTVKQIL 306


>gi|296840723|ref|ZP_06863291.2| riboflavin biosynthesis protein RibF [Neisseria polysaccharea ATCC
           43768]
 gi|296840167|gb|EFH24105.1| riboflavin biosynthesis protein RibF [Neisseria polysaccharea ATCC
           43768]
          Length = 306

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQAFINRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSSCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|51892664|ref|YP_075355.1| riboflavin kinase/FMN adenylyltransferase [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856353|dbj|BAD40511.1| riboflavin kinase/FMN adenylyltransferase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 330

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 23/328 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I     +P    G ++AIG +DG+HL H  IL   +  A         + F+P 
Sbjct: 1   MELVTRI---ADVPVRGTGNLIAIGKWDGVHLAHQAILRALVAEARRVGGQAVAVGFHPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    L     + +++  +G    +   F    A+ + E F+ +VLV  L  
Sbjct: 58  PMQVLRPEAAPPMLQSLEERAELMAALGVDVHLALPFDRALADMTPEAFVHQVLVGQLRA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G    FG+   G    +++     G        +R +  + VSS+ +R A+ KG 
Sbjct: 118 QQVMVGFNNTFGRGGKGTAETMRQLCTPLGIPVHIFQPVRAD-GENVSSTEVRFAVAKGR 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  AA LLG  + +   V+ G++ GR LG+PTAN++L    +L   GVY  R     +  
Sbjct: 177 MQAAARLLGRPYAVRGLVVQGDRRGRELGYPTANIRLEEGRLLPPHGVYTARVTVLGEPR 236

Query: 238 ---------------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
                          Y  + N G  PT+     L  E+ +FDF  ++YG+   V F +Y+
Sbjct: 237 KLQPPVTVTPRTGPVYGAMLNLGVRPTV-GGTELRCEAHLFDFRGDLYGRELQVEFLEYM 295

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           RPE  F +++ L   +  DE+ AR+ L 
Sbjct: 296 RPERAFPNLDALVAQLRADERAAREFLA 323


>gi|329929304|ref|ZP_08283057.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. HGF5]
 gi|328936673|gb|EGG33116.1| riboflavin biosynthesis protein RibF [Paenibacillus sp. HGF5]
          Length = 317

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/302 (36%), Positives = 160/302 (52%), Gaps = 8/302 (2%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    +  V AIG FDG+HLGH  +L  A+     N  P  +++F PHP+ +I   S   
Sbjct: 15  VREAAEPKVAAIGQFDGLHLGHASVLSAAVNIARENGVPAALITFYPHPKDVIGKGSYEG 74

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P   ++++LE+MG   L   +F  E +  S E F++++L   L ++T + G  FRFG
Sbjct: 75  YLTPQPDKQQLLEQMGIDVLYVVEFNKEFSQVSPEAFVEEMLFP-LNLQTAVVGFDFRFG 133

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
              AGD   LQ+ GE      V +     +  + V SS+IR AL  G + +A   LG  +
Sbjct: 134 HKGAGDAVKLQELGEGK-MSVVTVPPFLVD-GEKVGSSSIRIALKTGQLSDANRWLGRNY 191

Query: 191 TIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNP 248
            I   V+HGEK GR +GFPTAN++L  P +    GVYA+R RT        GV N G  P
Sbjct: 192 HIRGTVVHGEKRGRKIGFPTANLELTDPFVAPALGVYAVRARTDKHHDWIPGVMNVGVKP 251

Query: 249 TMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T        + E  +FDF  ++Y Q  TV    Y+R E KF+ +++L  ++  D  +ARK
Sbjct: 252 TFHEGITEPIFEVHLFDFEGDLYDQIMTVDIVQYIRKEHKFESVQELVEWIQRDAVEARK 311

Query: 308 IL 309
           IL
Sbjct: 312 IL 313


>gi|317471564|ref|ZP_07930911.1| riboflavin biosynthesis protein RibF [Anaerostipes sp. 3_2_56FAA]
 gi|316900967|gb|EFV22934.1| riboflavin biosynthesis protein RibF [Anaerostipes sp. 3_2_56FAA]
          Length = 310

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 11/311 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHP 59
           M   H  E  Q          VA+G FDG+H GH LI +Q ++         V SF+  P
Sbjct: 1   MEYIHQTENFQ-----FHNSAVALGKFDGLHRGHQLIFDQLLEYKKQGYQTVVFSFDRPP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              ++S +    +     +E++L K G   LI + FT E +  S   F+ +VL++ + +K
Sbjct: 56  VNTLKSENYH-MIYSKEEKERLLAKKGMDVLIEHPFTKEFSKLSPRDFVTEVLIKKVGMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G    FG  R G+  +L++  ++Y F  + I +L  N   IVSSS IR+ L +  +
Sbjct: 115 ILVVGDDCGFGYKRQGNVELLKEMQKEYDFKLIVIPKLELNGG-IVSSSRIRSLLREARI 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
             A  LL   F +   V+ G  +G+  LG PTAN +     +L   GVY  R   ++Q  
Sbjct: 174 EEANSLLSSPFLVYGPVVQGNHMGKDILGVPTANQIPNPEKLLPPNGVYVSRITIKNQVY 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E++I +F + IY +  +V    + RPE+KF+ ++ L   
Sbjct: 234 Y-GISNIGVKPTIEGKKHMGVETYILNFDKNIYHKPISVELLCFKRPEMKFESLDCLSRQ 292

Query: 298 MGEDEKKARKI 308
           M ED   AR  
Sbjct: 293 MKEDALFARDW 303


>gi|225027054|ref|ZP_03716246.1| hypothetical protein EUBHAL_01310 [Eubacterium hallii DSM 3353]
 gi|224955518|gb|EEG36727.1| hypothetical protein EUBHAL_01310 [Eubacterium hallii DSM 3353]
          Length = 309

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 165/298 (55%), Gaps = 4/298 (1%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           H K   VA+G F+GIH GH L++++  K   +     V +F+   R  +   +    +  
Sbjct: 10  HFKDTAVALGKFEGIHRGHQLLMDEVKKQELHGLRSVVFTFDRPTRLTLTGDTEYKQIYT 69

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + +ILEK G   LI + FT E A  + ++FI++VLVE +  K ++ GT F FGK+R+
Sbjct: 70  KKERREILEKRGIDILIEHPFTKEFAALTPDRFIREVLVEKVGAKVIVVGTDFHFGKNRS 129

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+K  E+ G+H + +++L+ N  + +SS+ IR +L KG +  A  LLG  +++  
Sbjct: 130 GSITDLEKLEEECGYHLIVVEKLQLN-GKDISSTRIRASLEKGAMEEAKALLGRNYSVSG 188

Query: 195 DVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           +++HG  +GRT+  PT N Q+    +L   GVY  +   +D+  Y G+ N G  PT+   
Sbjct: 189 EILHGNALGRTIQVPTINQQVPSFKLLPPNGVYVSKIHWKDEVYY-GITNIGTKPTVNNT 247

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               +E+ IFDF++++YG+   V    Y R E +F  +E L+  + +D +  ++ + +
Sbjct: 248 SEKTVETNIFDFNKDVYGEEMVVELLHYHRKETRFSSVEALQAQLFQDIEFGKQYVTN 305


>gi|224023573|ref|ZP_03641939.1| hypothetical protein BACCOPRO_00276 [Bacteroides coprophilus DSM
           18228]
 gi|224016795|gb|EEF74807.1| hypothetical protein BACCOPRO_00276 [Bacteroides coprophilus DSM
           18228]
          Length = 307

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +     + ++    L   +  IG FDG+H GH  +++Q  +  +      T+++F  H
Sbjct: 1   MEI-----LTENPSLVLPPSIATIGCFDGVHRGHRYLIQQVCEAAVKRGLHTTLITFPIH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q+      LS    +  +L+++     +   FT E +  SA++F+  +  E   +
Sbjct: 56  PRQVMQADYQPQLLSCLPQKTALLKQLQADYCLMLPFTHELSRLSAKEFMNML-HEQFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G   RFG +R+       + G++ G   +    L  N    +SSS IR  L +G+
Sbjct: 115 QALLIGYDHRFGHNRSEGFQDYCRYGKELGMEIIQAQALIEN-GVSISSSTIRKLLKEGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V +A H LGY + ++  V++G K+GRTLGFPTAN++      ++ +EGVYA+    ++Q 
Sbjct: 174 VKDANHFLGYSYYLDGKVVNGYKVGRTLGFPTANLRPSCPDKLIPEEGVYAVHVYLKEQ- 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            ++G+ N G  PT+     L +E  I DF+ +IY Q   + F   +R E KF  + +L  
Sbjct: 233 RFAGMLNIGHRPTLNNGSDLSIEVHILDFNADIYDQSMRIEFVQRIRTEQKFTGLNELIE 292

Query: 297 YMGEDEKKARKIL 309
            + +D K+ RK+L
Sbjct: 293 QLQQDRKEVRKLL 305


>gi|327314277|ref|YP_004329714.1| riboflavin biosynthesis protein RibF [Prevotella denticola F0289]
 gi|326944715|gb|AEA20600.1| riboflavin biosynthesis protein RibF [Prevotella denticola F0289]
          Length = 350

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 12/319 (3%)

Query: 2   HVFHNIEIN-----QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLS 54
            ++  +E+N     +     L      IG FDG+H GH  ++ + +  A        V++
Sbjct: 21  QIYRQLELNIIYIKEGEKPELPALAATIGFFDGVHRGHRFLIGRVVDEARRSGMASAVIT 80

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F+ HPR ++Q+      L+    + ++L +      +   F    A   A +F+ +VL  
Sbjct: 81  FDRHPRQVLQADYQPELLTTLDRKLQLLSETQVDNTLVLHFDRSLAALPARRFMDEVLRR 140

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ ++ G   RFG DRA       + G+  G   V  D       + VSSS IR  +
Sbjct: 141 QLNVRKLLIGYDNRFGHDRAEGFDDYVRYGQALGIGVVRADAFLP-GGEKVSSSVIRDRI 199

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRT 232
            +G + +A  LLGY +TIES ++ G   G  LGFPTAN+ ++    ++   GVYA+  R 
Sbjct: 200 RRGDIASANRLLGYAYTIESTIVRGYGNGHRLGFPTANLDMAACRQLIPAAGVYAVAVRQ 259

Query: 233 QDQTSY-SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           +D + +  G+ N G  PT      + +E  IF F  ++Y +   VSF   +R E +F  +
Sbjct: 260 KDSSEWRRGMMNIGTRPTFN-GKAMSMEVNIFRFDGDLYDKPLAVSFIAKIRDERRFGSL 318

Query: 292 EKLKIYMGEDEKKARKILE 310
           E L   + +D +    + +
Sbjct: 319 EALAHQLEQDREAINHLFD 337


>gi|257082745|ref|ZP_05577106.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis E1Sol]
 gi|257085446|ref|ZP_05579807.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Fly1]
 gi|256990775|gb|EEU78077.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis E1Sol]
 gi|256993476|gb|EEU80778.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Fly1]
 gi|315174382|gb|EFU18399.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1346]
          Length = 316

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN     V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPND--EVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|295094749|emb|CBK83840.1| riboflavin kinase/FMN adenylyltransferase [Coprococcus sp. ART55/1]
          Length = 323

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 13/309 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLS 73
           N  +   VA+G FDGIH GH L++EQ +K+     +  V +F+     +    S + T+ 
Sbjct: 13  NSTERTAVALGKFDGIHQGHMLLIEQVLKLQRQGYMGVVFTFDMRENHVFD-VSNMKTIY 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + +++   G   L+ Y F    A    + FI+ VLV+ +    V+ G+ +RFG+DR
Sbjct: 72  TSDEKAQVVSDTGVDVLVEYPFDDAFAATEPKAFIRDVLVDMMRAGYVVVGSDYRFGRDR 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD   L+   ++YG+  + ID+L  +    VSS+ IR  +++G V +   +LG  +++ 
Sbjct: 132 KGDVDTLRSYADEYGYKVIVIDKLEQDDEV-VSSTVIRKNISEGDVRSVIPMLGRPYSMT 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQ---------DQTSYSGVAN 243
            +V+ G+++GRT+G PTANM      L    GVYA R R               Y G+ N
Sbjct: 191 GEVVSGKQLGRTIGIPTANMLPEERKLYPPAGVYASRIRIIRGKHTGHEDPFRVYMGITN 250

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT+   G + +E+ IF F + IYGQ   V   + +R E KF  +++LK  M  D +
Sbjct: 251 IGDNPTVNDKGNITIETNIFGFDRNIYGQVIKVELIEQIRGEKKFGSLDELKAQMANDIE 310

Query: 304 KARKILESS 312
            +++IL + 
Sbjct: 311 TSKRILANK 319


>gi|218767581|ref|YP_002342093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis Z2491]
 gi|121051589|emb|CAM07887.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis Z2491]
          Length = 318

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/304 (32%), Positives = 151/304 (49%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 20  HNSPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+    F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLCFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D 
Sbjct: 253 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|325135620|gb|EGC58237.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis M0579]
          Length = 306

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|227518557|ref|ZP_03948606.1| FAD synthetase [Enterococcus faecalis TX0104]
 gi|227553084|ref|ZP_03983133.1| FAD synthetase [Enterococcus faecalis HH22]
 gi|256618873|ref|ZP_05475719.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ATCC 4200]
 gi|256958781|ref|ZP_05562952.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis DS5]
 gi|256962112|ref|ZP_05566283.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Merz96]
 gi|256965310|ref|ZP_05569481.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis HIP11704]
 gi|257078811|ref|ZP_05573172.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis JH1]
 gi|257086640|ref|ZP_05581001.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis D6]
 gi|257089698|ref|ZP_05584059.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis CH188]
 gi|257415912|ref|ZP_05592906.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis AR01/DG]
 gi|257419114|ref|ZP_05596108.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T11]
 gi|293383137|ref|ZP_06629054.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis R712]
 gi|293387710|ref|ZP_06632255.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis S613]
 gi|294781162|ref|ZP_06746511.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis PC1.1]
 gi|300860011|ref|ZP_07106099.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TUSoD
           Ef11]
 gi|307271225|ref|ZP_07552508.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4248]
 gi|307273416|ref|ZP_07554661.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0855]
 gi|307277579|ref|ZP_07558671.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2134]
 gi|307288268|ref|ZP_07568266.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0109]
 gi|312899422|ref|ZP_07758753.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0470]
 gi|312904044|ref|ZP_07763212.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0635]
 gi|312907275|ref|ZP_07766266.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           512]
 gi|312909893|ref|ZP_07768741.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           516]
 gi|227073976|gb|EEI11939.1| FAD synthetase [Enterococcus faecalis TX0104]
 gi|227177770|gb|EEI58742.1| FAD synthetase [Enterococcus faecalis HH22]
 gi|256598400|gb|EEU17576.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ATCC 4200]
 gi|256949277|gb|EEU65909.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis DS5]
 gi|256952608|gb|EEU69240.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis Merz96]
 gi|256955806|gb|EEU72438.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis HIP11704]
 gi|256986841|gb|EEU74143.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis JH1]
 gi|256994670|gb|EEU81972.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis D6]
 gi|256998510|gb|EEU85030.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis CH188]
 gi|257157740|gb|EEU87700.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160942|gb|EEU90902.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T11]
 gi|291079476|gb|EFE16840.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis R712]
 gi|291082899|gb|EFE19862.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis S613]
 gi|294451729|gb|EFG20182.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis PC1.1]
 gi|300850829|gb|EFK78578.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TUSoD
           Ef11]
 gi|306500784|gb|EFM70104.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0109]
 gi|306505844|gb|EFM75022.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2134]
 gi|306509943|gb|EFM78968.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0855]
 gi|306512723|gb|EFM81372.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4248]
 gi|310626303|gb|EFQ09586.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           512]
 gi|310632520|gb|EFQ15803.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0635]
 gi|311289851|gb|EFQ68407.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis DAPTO
           516]
 gi|311293466|gb|EFQ72022.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0470]
 gi|315027469|gb|EFT39401.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2137]
 gi|315033690|gb|EFT45622.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0017]
 gi|315036774|gb|EFT48706.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0027]
 gi|315147775|gb|EFT91791.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4244]
 gi|315150723|gb|EFT94739.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0012]
 gi|315164165|gb|EFU08182.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1302]
 gi|315166735|gb|EFU10752.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1341]
 gi|315169975|gb|EFU13992.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1342]
 gi|315575648|gb|EFU87839.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis
           TX0309B]
 gi|315578391|gb|EFU90582.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0630]
 gi|315579908|gb|EFU92099.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis
           TX0309A]
 gi|323480525|gb|ADX79964.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis 62]
 gi|327534918|gb|AEA93752.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis OG1RF]
          Length = 316

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|283458500|ref|YP_003363127.1| FAD synthase [Rothia mucilaginosa DY-18]
 gi|283134542|dbj|BAI65307.1| FAD synthase [Rothia mucilaginosa DY-18]
          Length = 338

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 86/311 (27%), Positives = 154/311 (49%), Gaps = 9/311 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSP 68
             +P      VV IGNFDG+H GH  ++ + +     +      +SF+PHP  + +  + 
Sbjct: 8   SEVPAGYGPSVVTIGNFDGVHRGHARVISRVVSLAEEHGLSSIAVSFDPHPMQVHRPEAT 67

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              +     +   +  +G +  +   + L+ A+ + E+F++   V+ L  + V+ G   R
Sbjct: 68  HHDIMGQGSRRYFMCLLGLNDYLLLNYNLQFASQTPEEFVKSTFVDALNARFVVIGDDVR 127

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK+ +GD   +++ GEKYGF  V +++L  +++   SS+ IR  L +G +  A  LLG 
Sbjct: 128 FGKNNSGDLNTMRELGEKYGFEVVVVEDLMVDENTRCSSTRIRQLLLEGDMPAATELLGR 187

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
              +  +V+HG   GR LGFPTAN++L +  ++  +GVYA     +    +    + G N
Sbjct: 188 HHMMAGEVVHGLARGRELGFPTANLELEARGLIPADGVYAGWLVDESGNRHPSAISVGTN 247

Query: 248 PTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           PT        +E+ + D  +       +YGQR  + F   LRP + +  +E L   + +D
Sbjct: 248 PTFDGIEHRQVEAHVIDRPEERVEDFNLYGQRVLIEFVKRLRPMVAYTGVEALIEQINDD 307

Query: 302 EKKARKILESS 312
             + R++L   
Sbjct: 308 VVQTREVLAED 318


>gi|206603981|gb|EDZ40461.1| Riboflavin kinase / FAD synthase (RibC) [Leptospirillum sp. Group
           II '5-way CG']
          Length = 319

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 6/322 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M++  +     ++    +   + IGNFDGIH GH  +L   ++ +  +    TVL+F+PH
Sbjct: 1   MNILSSFSEMNTVRESGQEISLTIGNFDGIHQGHQKLLNDLVEYSRKTKTLATVLTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++    P   +     ++KIL ++G   L+   FT +      E FI+ +L+E+  +
Sbjct: 61  PLMVLSPEIPFQRIMSIPHKKKILSELGIDLLVITPFTPDLGRMEPETFIRDILLEYFPL 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  RAG     Q+     G     I  + +   + VSSS IR  L  G 
Sbjct: 121 KGLVIGEGFRFGHKRAGSVADFQRVLSPEGVLVKAIPAVEDATGR-VSSSRIRELLRAGR 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A   L   F ++  V  GEK GR LGFPT N+  +PD +L   GVY  R +T  +  
Sbjct: 180 VKEANQFLTRPFQLDGTVEEGEKRGRKLGFPTLNIHPTPDRLLPASGVYVTRTKT-SKGW 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++G +  G+ PT  P    ++E+ +FDFS  +YGQ   V F ++LR +  F   E L   
Sbjct: 239 FNGTSYVGKKPTFTPLMQPVIETHLFDFSDTLYGQYIQVDFLEFLRGDRAFPGPEALIAA 298

Query: 298 MGEDEKKARKILESSYPLSERD 319
           +  D ++++     + P+S+ D
Sbjct: 299 ISNDLQQSKDYFREN-PISQGD 319


>gi|167626614|ref|YP_001677114.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596615|gb|ABZ86613.1| riboflavin kinase/FMN adenylyltransferase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 306

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 165/313 (52%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  N+       ++     VAIG+FDG+HLGH  I+++ I IA  + +   ++ F P 
Sbjct: 1   MKIITNLNKT----DNSLAKAVAIGSFDGVHLGHQAIIQKLIHIAKENNLVPYIMFFEPL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           +     +   L K+G   +I +KF    AN  A++FI++ LV  L  
Sbjct: 57  PKEFFLKEIAPTRIYDFRNKIINLNKLGIEHIICHKFNQRFANIEAKEFIEEFLVRKLNT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F+FGK+RAG+  +L++    + F    I  L N  +  +SSS IR A+ +  
Sbjct: 117 KHIIVGDDFKFGKNRAGNYSLLEQYSLTHDFTVDRISTL-NLDNHRISSSQIRQAIAEHD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  L+G    I S V+HG+K GR +GF T N +L  +  LK GVY  +    D   +
Sbjct: 176 IQQANKLIGSSLKINSRVLHGQKNGRKIGFHTVNQKLLKNSALK-GVYLSKVYIDD-EVF 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G  PT+      LLE+ IF+F++ IYG+  T    D++RPE KF   ++LK  +
Sbjct: 234 FGVTNAGTRPTI-DGKSNLLETHIFNFNKFIYGKHITTEIIDFIRPEKKFNSFDELKEQI 292

Query: 299 GEDEKKARKILES 311
            +D + A+K++ +
Sbjct: 293 SKDIETAKKLITT 305


>gi|312952292|ref|ZP_07771167.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0102]
 gi|310629676|gb|EFQ12959.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0102]
 gi|315153255|gb|EFT97271.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0031]
          Length = 316

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++ +    
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIKVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|15614972|ref|NP_243275.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus
           halodurans C-125]
 gi|10175029|dbj|BAB06128.1| riboflavin kinase / FAD synthase [Bacillus halodurans C-125]
          Length = 313

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M   +     Q   +     V+A+G FDG+HLGH  ++E A+KIA        V++F+PH
Sbjct: 1   METIYLTHPIQYDRHENPPTVMALGYFDGVHLGHRTVIETAVKIAKEKGAMSAVMTFHPH 60

Query: 59  PRTIIQ-SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P+ +++  S P++ ++P   +   +E +G   L    F    A+ + +QF+ + L+  L 
Sbjct: 61  PKEVLRKPSEPMYYITPLEDKITEIETLGVDKLFVVTFNEIFASLTPQQFVDEYLLS-LH 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
              V+ G  F +G+   G    L     +  F    + ++  +    +SS++IR  L +G
Sbjct: 120 TIHVVAGFDFTYGQLGKGTMETLP-FHARNLFSQTTVAKVEEH-GTKISSTHIRQLLDEG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQT 236
            V   +  LG  + ++  V+HGEK GRT+GFPTAN+  ++  ++   GVY +     D  
Sbjct: 178 RVEEISQFLGRDYEVKGKVVHGEKRGRTIGFPTANVAPIARYMIPATGVYVVEA-VLDGR 236

Query: 237 SYSGVANFGRNPTMVPNG--PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  GV N G  PT   +      +E  +FDF+  IY +  TV +   +R E KF  +E L
Sbjct: 237 TLQGVCNVGYKPTFHDSTCHGRTIEVHLFDFASHIYERGLTVRWKKRIRSEQKFASLEDL 296

Query: 295 KIYMGEDEKKARKIL 309
           K  + +D + A+   
Sbjct: 297 KKQIQQDTETAKAYF 311


>gi|118444321|ref|YP_878205.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           novyi NT]
 gi|118134777|gb|ABK61821.1| riboflavin biosynthesis protein RibF [Clostridium novyi NT]
          Length = 308

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   +A+G+FDG+H+GH  ++ + I++A   N+   V +F  HP TII        +   
Sbjct: 14  EKTYIALGSFDGLHVGHMSLINKTIELAKENNAKSMVFTFKNHPLTIINKDMAPKLIIDN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ ++LEK G   +    F  E    S E FI+ + VE    K +I G  +RFG    G
Sbjct: 74  KVKSELLEKCGIDIVNYVNFDNEFMKISPEDFIKNM-VECYNAKGIIVGFNYRFGYKNLG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K   K+GF    I+ ++ +    VSSS IR  +++G++  A   L   F ++  
Sbjct: 133 DIELLKKLSIKFGFELNIIEPVKIDGDV-VSSSKIRQLVSEGNITKANKFLNRPFMMQGT 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+++GR + FPT N+  +   +L K GVY    +      Y G+ N G NPT+  + 
Sbjct: 192 VVHGKQLGRKINFPTTNLNYNKKFVLPKGGVYYTCVKYNG-EVYRGITNIGYNPTV-SDK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I  F ++IY +   + F + +R E KF  IE+L   + +D+  A K
Sbjct: 250 KLSIETHILGFEKDIYDENLKLYFCERIRSEKKFNSIEELASQLSKDKNFALK 302


>gi|291562547|emb|CBL41363.1| riboflavin kinase/FMN adenylyltransferase [butyrate-producing
           bacterium SS3/4]
          Length = 309

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/296 (31%), Positives = 159/296 (53%), Gaps = 5/296 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +  VV+IG FDG+H GH  ++ + +K       I V +F   P T+++       +    
Sbjct: 14  EKTVVSIGKFDGLHRGHQKLMHEMLKWKEQGFKIAVFTFATPPGTLVKGKMQ-TMIMTNP 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E +LE+ G   ++ Y F  E  + + E+F+  +LV  +    +++G    FG   AGD
Sbjct: 73  EREMLLERAGVDYIVEYPFDEEVCHMAPEKFVSDILVGHMNAGVIVSGPDCHFGYKAAGD 132

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++   +YG+    +D+ R+ + +I+SS+ IR  L  G+++ A  LLGY + +   V
Sbjct: 133 CAMLERLSSEYGYRYFVVDKERDEEGKIISSTYIREMLADGNIIKANKLLGYYYFVTGTV 192

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG  IG T  +PTAN+       L K GVY  R    D  +Y G+ N G  PT+    P
Sbjct: 193 QHGNAIGHTKLYPTANLIPPAVKHLPKFGVYVTRVTV-DGKTYGGLTNVGAKPTISGENP 251

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA-RKILE 310
           + +E+++++F  ++YG+   V   D++RPE+KF+ I+ LK  +  D K+  R+ LE
Sbjct: 252 VGVETYLYNFEGDLYGKDMKVELLDFVRPEMKFESIDALKAQLDHDIKECQRRYLE 307


>gi|198274010|ref|ZP_03206542.1| hypothetical protein BACPLE_00146 [Bacteroides plebeius DSM 17135]
 gi|198273088|gb|EDY97357.1| hypothetical protein BACPLE_00146 [Bacteroides plebeius DSM 17135]
          Length = 310

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 97/302 (32%), Positives = 156/302 (51%), Gaps = 8/302 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
            L   V  IG FDG+H GH  +LEQ   I  A      +++F  HPR ++ +S     L+
Sbjct: 11  SLPPCVATIGCFDGVHRGHQYLLEQVHNIAKAEGIASCLITFANHPRQVLDTSFRPRLLT 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             S + +  E+      +   FT E +  SA +F+ KVL E  +V+T+  G    FG  +
Sbjct: 71  CLSQKIERFEQSPIEYCVLLPFTKELSLLSAREFM-KVLHEEYQVQTLFVGYDHHFGHSK 129

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                   + G+++G   +   +        VSS+ IR+ L +G +  A   LGY + + 
Sbjct: 130 DEGFQEYCQYGKEFGMRVMQ-SKALTEDGVSVSSTLIRSCLCEGKIELANSYLGYHYYLT 188

Query: 194 SDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+ G K+GRTLGFPTAN+Q   +  +L   GVYA+         Y G+ N G  PT+ 
Sbjct: 189 GRVVDGRKVGRTLGFPTANIQPLCADKLLPASGVYAVYVYLGG-KRYEGMLNIGSCPTVH 247

Query: 252 P-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +  + +E  I DF ++IY +   V F DY+RPE+KF+++E+L + + +D+  A+K+L+
Sbjct: 248 DGDKSITVEVHILDFEKDIYQETIKVEFIDYIRPEVKFENVEELTLQLQKDKIVAKKLLD 307

Query: 311 SS 312
             
Sbjct: 308 QK 309


>gi|229546029|ref|ZP_04434754.1| FAD synthetase [Enterococcus faecalis TX1322]
 gi|229550219|ref|ZP_04438944.1| FAD synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972996|ref|ZP_05423582.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T1]
 gi|307291277|ref|ZP_07571161.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0411]
 gi|229304657|gb|EEN70653.1| FAD synthetase [Enterococcus faecalis ATCC 29200]
 gi|229308872|gb|EEN74859.1| FAD synthetase [Enterococcus faecalis TX1322]
 gi|255964014|gb|EET96490.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T1]
 gi|306497508|gb|EFM67041.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0411]
 gi|315030953|gb|EFT42885.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX4000]
 gi|315155967|gb|EFT99983.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0043]
 gi|315157863|gb|EFU01880.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0312]
          Length = 316

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|288800592|ref|ZP_06406050.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332805|gb|EFC71285.1| riboflavin biosynthesis protein RibF [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 312

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 100/301 (33%), Positives = 152/301 (50%), Gaps = 7/301 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSP 74
           L+  V  IG FDG+HLGH  +L+Q ++ A+        ++F+ HPR ++Q +     +SP
Sbjct: 13  LQPSVATIGFFDGVHLGHQHVLKQVVEHAHRRQWTSIAITFDVHPRVVVQPNFTPELISP 72

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + +++   G        F+ E A  SA  F+Q +L E L V+ +I G   RFGK   
Sbjct: 73  LEEKLQLISNTGVDLTAVLPFSTEMAQLSAFHFMQTILKEQLNVQQLIIGYDNRFGKQSG 132

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                  + G + G   +        + + VSSS IR  L  G V     LLG   +   
Sbjct: 133 ETFEDYVRFGAELGIEVLLSTPFDTPQGR-VSSSTIRKKLHNGDVNVVQQLLGRPHSFLG 191

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMV 251
            V+HG + GR LGFPTAN++   D  I+ KEGVYA++         Y+G+ N G  PT  
Sbjct: 192 KVVHGYQEGRKLGFPTANIKPQYDTTIVPKEGVYAVQLELSGSHKRYNGMLNIGNRPTYG 251

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 +E  IFDF++EIY     V F + +R E+KF  IE+LK  +  D+ +  +IL++
Sbjct: 252 T-FNQTIEVHIFDFNEEIYNSEVRVFFIERVRDEVKFSSIEQLKEQLIADKARIEQILKA 310

Query: 312 S 312
           +
Sbjct: 311 T 311


>gi|323485579|ref|ZP_08090923.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14163]
 gi|323692927|ref|ZP_08107149.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14673]
 gi|323401097|gb|EGA93451.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14163]
 gi|323503010|gb|EGB18850.1| riboflavin biosynthesis protein RibF [Clostridium symbiosum
           WAL-14673]
          Length = 315

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 96/303 (31%), Positives = 160/303 (52%), Gaps = 5/303 (1%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           N  +  VV +G FDG+H GH  +L +  +         V +F   P T+++       ++
Sbjct: 11  NIEEPTVVTLGKFDGLHRGHQKLLNEVFRFRDKGYKTAVFTFETAPGTLMKGKLQ-TMIT 69

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + + + LEK G   L+ Y F  E A+   E+F+  +L   ++ + ++TGT FRFG  R
Sbjct: 70  TNAERRENLEKAGVDYLVEYPFNQEVAHMQPEEFVSHILCGQMKARAIVTGTDFRFGYQR 129

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            GD  +L+    KYG+  V +D+  +  S+ +SS+ IR  L +G++  A  LLGY + I 
Sbjct: 130 KGDVELLKSLAGKYGYEMVIVDKALD-GSREISSTYIREELARGNIKKANELLGYTYMIH 188

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIHG  +G TLGFPT N++      L   GVY  +    D   ++G+ N GR PT+  
Sbjct: 189 GRVIHGRHLGTTLGFPTVNIEPREQKHLPAFGVYLSK-VVIDGNIHNGITNIGRKPTIEG 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             P+ +E++I+D   ++Y +   V   D++RPE +F  +E LK  +  D++  R++    
Sbjct: 248 KHPVGVETYIYDLDADLYDKWIEVRLTDFIRPEQRFSSVEALKERVLADKEAGRRLHARP 307

Query: 313 YPL 315
           Y +
Sbjct: 308 YSI 310


>gi|29375863|ref|NP_815017.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis V583]
 gi|29343325|gb|AAO81087.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis V583]
          Length = 318

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 6   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 62

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 63  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 121

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 122 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 179

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 180 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 238

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 239 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 298

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 299 DQLKQDERDTADYFQQS 315


>gi|121634248|ref|YP_974493.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis FAM18]
 gi|254804337|ref|YP_003082558.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha14]
 gi|120865954|emb|CAM09691.1| putative riboflavin kinase/FMN adenylyltransferase [Neisseria
           meningitidis FAM18]
 gi|254667879|emb|CBA03970.1| riboflavin kinase/FMN adenylyltransferase [Neisseria meningitidis
           alpha14]
          Length = 318

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|268594052|ref|ZP_06128219.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|268602891|ref|ZP_06137058.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268547441|gb|EEZ42859.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|268587022|gb|EEZ51698.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|317163486|gb|ADV07027.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 319

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|312876946|ref|ZP_07736921.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796261|gb|EFR12615.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 305

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     A+     V +F  HP 
Sbjct: 1   MNVYEIVEKRHDSP------AVALGFFDGFHIGHKKLFEILNANASGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--YILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY +     D   Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVY-VTNTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG++  + F D++R E KF +I +LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDLYGKQVKIEFIDFVREEKKFSNINELKNQIA 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|254492975|ref|ZP_05106146.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           1291]
 gi|226512015|gb|EEH61360.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           1291]
          Length = 319

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|256838639|ref|ZP_05544149.1| riboflavin biosynthesis protein RibF [Parabacteroides sp. D13]
 gi|298374087|ref|ZP_06984045.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_19]
 gi|256739558|gb|EEU52882.1| riboflavin biosynthesis protein RibF [Parabacteroides sp. D13]
 gi|298268455|gb|EFI10110.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 3_1_19]
          Length = 306

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +      L+    +
Sbjct: 16  VATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + LE  G    I   FT+E + +SA++FI  +L + L VKT++ G   RFG DR     
Sbjct: 76  LQQLETTGVDYCIVLDFTIELSRFSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                G + G   +      +  +  VSSS IR  L  G+V  AA+LL Y + +   ++ 
Sbjct: 136 QYVVYGTECGIEVLKASPY-DEGNTAVSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVS 194

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLGFPTAN+++     ++   GVYA+    +    Y G+   G  PT+     +
Sbjct: 195 GYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEG-ERYKGMLYIGDRPTLNNGKDI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D      +L
Sbjct: 254 SMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL 306


>gi|325109288|ref|YP_004270356.1| riboflavin kinase; FMN adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
 gi|324969556|gb|ADY60334.1| riboflavin kinase; FMN adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
          Length = 313

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +I   +      + G V+IGNFDG+H GH  +L   ++ A   + P   ++F+P 
Sbjct: 1   MQILTDISEAEPF----RNGAVSIGNFDGVHRGHQAMLSALVEQARRLDGPALAMTFDPP 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I  +     LS    + +++ K+G  AL+ Y    E  + +A+ F Q+++++ L+ 
Sbjct: 57  PVALISPAKVPPRLSTVERKAELMSKLGVDALLVYPTNREFLSLTADDFFQQIVLQQLQA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FG++R+G   +L+   E+ G     I  +   +   +SS+ IR  +  G 
Sbjct: 117 KGMVEGDNFCFGRNRSGTADVLRDYCERSGLELRIISPVTAGEKV-ISSTRIRELIRHGS 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A  LLG+ + +   V+ G + GR +GFPTAN+     ++   GVYA R    D  + 
Sbjct: 176 VSEAIELLGHPYQLTGKVVSGARRGRLIGFPTANLAEVTTLIPSPGVYAGRCEV-DGRAI 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +   N G NPT        +E  +     ++YGQ+ +V  F   R   +F   E L++ +
Sbjct: 235 AAAINIGPNPTFAE-QEHKIEIHLIGHDGDLYGQQLSVELFTECRKIKQFDSAESLRLQL 293

Query: 299 GEDEKKARKILESSYPLSER 318
            +D  +  ++ +  +    R
Sbjct: 294 EKDIAQIEQLFQERFGSDAR 313


>gi|268600574|ref|ZP_06134741.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|291044615|ref|ZP_06570324.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
 gi|268584705|gb|EEZ49381.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|291011509|gb|EFE03505.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
          Length = 319

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAARTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|59800531|ref|YP_207243.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA 1090]
 gi|59717426|gb|AAW88831.1| putative riboflavin kinase / FMN adenylyltransferase [Neisseria
           gonorrhoeae FA 1090]
          Length = 319

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVVFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|320533272|ref|ZP_08033975.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134512|gb|EFW26757.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 316

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 14/305 (4%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANN------SPITV-LSFNPHPRTIIQSSSPIFTLSPPS 76
           +G FDG+H GH  +L + +++++        P+ V ++F+PHPR++ Q  + +  ++  +
Sbjct: 1   MGIFDGVHRGHQAVLGRVVELSHELAHGDRRPLAVAITFDPHPRSVHQPEADLPLIASLT 60

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   LE +G  A++   +TL+ A+ + + F++  L   L  + V+ G   RFG   AGD
Sbjct: 61  DRLTSLEDLGLDAVLVITYTLDFASQNPQDFVRTWLEGLLGARAVVVGDDVRFGWRNAGD 120

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L++ G   GF    +  +R+++ +  SS+ IR  L  G++   + +LG    +   V
Sbjct: 121 AATLEQIGRADGFEVEIVSTIRSDEGRRWSSTWIRQCLKDGNMGQVSRVLGRPHRLRGVV 180

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-----QTSYSGVANFGRNPTM 250
           + G + GR LGFPTAN++ +   ++  +GVYA                    + G NPT 
Sbjct: 181 VRGLRRGRELGFPTANLEAATAGVVPPDGVYAGWLIRGGGDGGSVQRLPAAISIGTNPTF 240

Query: 251 VPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  +E+ +       +YG+   V   + LRP + F  ++ L   M  D +   +IL
Sbjct: 241 DDVPQRTVEAHVLGRADLNLYGEEVGVELVERLRPMLAFDGLDPLLAQMRSDIEDTARIL 300

Query: 310 ESSYP 314
               P
Sbjct: 301 GVPVP 305


>gi|256852936|ref|ZP_05558306.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis T8]
 gi|257422819|ref|ZP_05599809.1| riboflavin biosynthesis protein ribF [Enterococcus faecalis X98]
 gi|256711395|gb|EEU26433.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis T8]
 gi|257164643|gb|EEU94603.1| riboflavin biosynthesis protein ribF [Enterococcus faecalis X98]
          Length = 318

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 6   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 62

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 63  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 121

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 122 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 179

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 180 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 238

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 239 KWYVGMGSIGHNDTFGKGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 298

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 299 DQLKQDERDTADYFQQS 315


>gi|194097683|ref|YP_002000723.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae NCCP11945]
 gi|193932973|gb|ACF28797.1| Riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           NCCP11945]
          Length = 318

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|218295164|ref|ZP_03496000.1| riboflavin biosynthesis protein RibF [Thermus aquaticus Y51MC23]
 gi|218244367|gb|EED10892.1| riboflavin biosynthesis protein RibF [Thermus aquaticus Y51MC23]
          Length = 294

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/294 (33%), Positives = 142/294 (48%), Gaps = 15/294 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
              VVA+G+FDG+HLGH  +L QA+    A   P+ V +F+P  +   +       L   
Sbjct: 12  GPKVVAVGSFDGVHLGHQHLLRQALAEAKARRLPLLVYTFDPPTKVFTRGEG---FLMDL 68

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L  +G   ++   F    A  SAE F++ +    LE + +  G  FRFG+ RAG
Sbjct: 69  EEKVEALRSLGVELILAVPFNETFARRSAEAFLEDL--RALEAEAIYVGEDFRFGQGRAG 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+K         V +  L     + V SS IR  L  G V  A HLLG  ++    
Sbjct: 127 TPEGLKK------VAPVRLIPLLELGGEPVKSSRIRDLLKAGQVEEARHLLGRPYSAYGV 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+++GR LGFPTAN+ + P  +L  GVYA+         Y GVAN G  PT+     
Sbjct: 181 VVEGDRMGRKLGFPTANLAVHPLKVLPPGVYAVEAEGA-FGRYKGVANVGFRPTL-GGEE 238

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  +  F  E+YG+   V F   LR E +F  +E LK  + +D  +AR+  
Sbjct: 239 RRLEVHLLGFLGELYGEEVRVRFLKRLREERRFPSLEDLKAQIAQDVAEARRYF 292


>gi|315652141|ref|ZP_07905139.1| riboflavin biosynthesis protein RibF [Eubacterium saburreum DSM
           3986]
 gi|315485633|gb|EFU76017.1| riboflavin biosynthesis protein RibF [Eubacterium saburreum DSM
           3986]
          Length = 316

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSS 66
           IN +  N  +   V IG FDG H GH  +                V SF   P  +++ +
Sbjct: 5   INTTDINITEKTAVVIGKFDGEHRGHRKLFRTLKDEANKKGLKTVVFSFRTLPSNVVK-N 63

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +     + K LE++G    I Y F +  A  + E+F++ +L++ L +  ++ G  
Sbjct: 64  KHTTQIFTNVERRKKLEELGIDYYIEYPFDMNIARLTGEEFLKDILIKKLGMAEIVAGDD 123

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             FG  ++G+  +L +  +  GF    I + ++     +SS+ IR  L +G +  A  LL
Sbjct: 124 AAFGYKKSGNVELLNRLSKDLGFDVKIITKEKDEFQNDISSTLIRAKLDEGDMEEANKLL 183

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS-YSGVANF 244
           G  ++I   V  G K+G  LGFPT N+  S    L K GVYA R R  D  + Y G+ N 
Sbjct: 184 GGVYSISGIVEEGNKLGAKLGFPTLNLFPSSGKHLPKSGVYASRVRIGDDDTLYLGLTNV 243

Query: 245 GRNPTMVPNGP---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           G NP++  +       +E+++++F   +YG+   V  + Y+RPEIKF  +E LK  + +D
Sbjct: 244 GSNPSIKDDKKDHIARVETYLYNFDASLYGREIEVYLYKYIRPEIKFDSLEALKSQISKD 303

Query: 302 EKKARKILES 311
           +++    L S
Sbjct: 304 KEEVLNFLNS 313


>gi|297180240|gb|ADI16460.1| fad synthase [uncultured bacterium HF770_11D24]
          Length = 321

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 5/311 (1%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHP 59
            V   I     L N  +   +AIG FDG+HLGH  +L QAI+    N      ++F+ HP
Sbjct: 13  RVVKIIHQPADLANGSRKACLAIGMFDGVHLGHQQVLRQAIEDSHRNEGRSVAVTFDRHP 72

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++I        L   + + + +E +G  A +  +F    +     +F++++   +  + 
Sbjct: 73  ASVISPDRTPALLQTRAQRLRAIESLGIDAALLIEFDTAFSRKPGAEFVRELADGFGAIH 132

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           ++  G  F FG  R G+ G+L+  G+  GFH   +  + +   Q VSS+ IR A+  GH+
Sbjct: 133 SICVGANFTFGHRRDGNVGLLRTLGQALGFHVHGLQAV-SLDGQAVSSTRIRAAVRTGHL 191

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  +LG  F IE  V+ G++ GR LGFPTAN+  +   L   GVYA   R   Q ++ 
Sbjct: 192 DAAGQMLGRTFAIEGTVVEGDRHGRELGFPTANLDTNGLALPPNGVYAAHAR-LGQATHR 250

Query: 240 GVANFGRNPTMVPNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V N G  PT+    P L +E+ + DF  ++YGQ   +   + LR E +F   ++L   +
Sbjct: 251 SVLNIGLRPTLANPEPTLQVEAHLLDFDADLYGQAMEIELVERLRDEQRFGSTDELAAQI 310

Query: 299 GEDEKKARKIL 309
             D ++AR + 
Sbjct: 311 SRDIERARTLF 321


>gi|124514862|gb|EAY56373.1| riboflavin kinase / FAD synthase (RibC) [Leptospirillum rubarum]
          Length = 319

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 96/322 (29%), Positives = 158/322 (49%), Gaps = 6/322 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M++  +     ++    +   + IGNFDGIH GH  +L   ++ +  +    TVL+F+PH
Sbjct: 1   MNILSSFSEMNTVRESGQDIALTIGNFDGIHQGHQKLLNDLVEYSRKTKTLATVLTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++    P   +     ++K+L  +G   L+   FT +      E FI+ +L+ +  +
Sbjct: 61  PLMVLSPEIPFQRIMSIPHKKKVLADLGIDLLVITPFTPDLGRMEPETFIRDILLGYFPL 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  FRFG  RAG     Q+     G     I  + +   + +SSS IR  L  G 
Sbjct: 121 KALVIGEGFRFGHKRAGSVADFQRVLSPEGVLVKAIPAVEDGTGR-ISSSRIRELLRAGR 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A   L   F ++  V  GEK GR LGFPT N+  +PD +L   GVY  R +T  +  
Sbjct: 180 VKEANRFLTRPFQLDGTVEEGEKRGRKLGFPTLNIHPTPDRLLPASGVYVTRTKTP-KGW 238

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           ++G +  G+ PT  P    ++E+ +FDFS  +YGQ   V F ++LR +  F   E L   
Sbjct: 239 FNGTSYVGKKPTFTPLVQPVIETHLFDFSDTLYGQYIQVDFLEFLRGDKAFPGPEALISA 298

Query: 298 MGEDEKKARKILESSYPLSERD 319
           +  D ++++     + P+ + D
Sbjct: 299 ISNDLQQSKDYFREN-PIPQGD 319


>gi|291523281|emb|CBK81574.1| riboflavin kinase/FMN adenylyltransferase [Coprococcus catus GD/7]
          Length = 310

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 5/301 (1%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSP 74
           HL   VVA+G FDG+H GH L++ +  +         V +F+ HP +++        +  
Sbjct: 11  HLDHTVVALGKFDGLHRGHQLLINKLKEYGKKGFQTVVFTFDFHPMSLLTGKKQ-SLIYT 69

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + +I+E+MG   LI Y FT ETA+   E F++ VLV  +  K ++ G  F FG  R+
Sbjct: 70  KEERLRIVEEMGIDVLIEYPFTQETAHMMPEDFVRDVLVRDIGAKVIVVGDDFHFGYQRS 129

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD   L+K    YG+     ++L  +  + +SS+ IR  + +G +     LLG  + I  
Sbjct: 130 GDVSFLKKHAAAYGYVVDNCEKLCVH-GEEISSTMIRGYIAEGRMETVTELLGRPYEING 188

Query: 195 DVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMVP 252
            VI G+  GR +   TAN+      +L  EGVYA   + +     Y  + N GRNPT+  
Sbjct: 189 KVIPGKANGRKVDMRTANLAPDDIKLLPPEGVYASVVQIEGMEGKYYALTNIGRNPTVGD 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           +  L +E+ + +FS ++Y +  TV  +  LR E KF  +E++K  + +D++KA    +  
Sbjct: 249 HNELRIETHVVEFSGDLYDRMITVRIYQRLRDEHKFASLEEVKAQVMKDQEKAMAYFKEH 308

Query: 313 Y 313
           +
Sbjct: 309 H 309


>gi|91200984|emb|CAJ74041.1| similar to riboflavin biosynthesis protein RibF [Candidatus
           Kuenenia stuttgartiensis]
          Length = 318

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 14/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M   + I         +   VV +G FDG+H GH  I+E  +++    +    +++F+ H
Sbjct: 1   MEKIYRI---SEFKGKIHNPVVTLGVFDGVHRGHQKIIEYTKSLASKKSGDSVIITFDVH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++++ +P F ++  S +  + E++G    +   F    A  +A+ FI+ +LV+ L+ 
Sbjct: 58  PRVLLENKTPFF-ITSLSHRLVLFERLGVDYTLILPFNDSLAQTNAKDFIENILVKELDS 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G    FGK+R+G+  ++++   KY +           K Q++SS+ IR A+ +G 
Sbjct: 117 KCIVLGFNCHFGKNRSGNIKLVKELAGKYHYEAHECPP-ETYKGQVISSTVIRKAIQEGA 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  +LG   ++   V+     G T+G+PTAN+ L  +I   +GVYA +   +++  Y
Sbjct: 176 LEKAEAMLGRPVSVLGTVVRKSGRGVTMGYPTANLDLHHEIRPPQGVYATKVCWKERE-Y 234

Query: 239 SGVANFGRNPTM------VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             + N G  PT         +  + +E+ I DF + IYG+   V F   +R EI F  IE
Sbjct: 235 LALTNIGSRPTFFKESLSSEDETMEIETHILDFHESIYGKNLEVQFLFRIRDEIPFGSIE 294

Query: 293 KLKIYMGEDEK 303
            LK  + +D++
Sbjct: 295 ALKQQIEKDKE 305


>gi|302038049|ref|YP_003798371.1| riboflavin biosynthesis protein ribF [Candidatus Nitrospira
           defluvii]
 gi|300606113|emb|CBK42446.1| Riboflavin biosynthesis protein RibF [Candidatus Nitrospira
           defluvii]
          Length = 321

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +   +  + S P      VV IGNFDG H GH  +L++ +  A        VL+F+PH
Sbjct: 1   MKISRGLTPSTSRPY----SVVTIGNFDGHHHGHRALLDRVVATARREAGTALVLTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+     +  L+ P  +    E  G   ++  +FT   A  S  QF ++VL + +  
Sbjct: 57  PVKILAPQVNLMFLTTPEEKLARFEAAGIDEVVFLEFTTAFAALSPAQFAKQVLCDGIGT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FGK RAG    L K G + GF    +  +  +  ++VSS+ IR  +  G 
Sbjct: 117 RELYVGEHFAFGKGRAGRIADLLKLGAQLGFRVHPMAPVTID-GEVVSSTRIRQLIHAGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A  LLG  ++IE  VI G   G  LG+PTAN++L    ++  +GVYA +   +    
Sbjct: 176 LQKAIRLLGRPYSIEGTVISGAHRGTELGWPTANLRLPEGRVIPPDGVYAAQVSWKGSG- 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            + V   G  PT    G  LLE  I D   E+YG+   V    ++R +  F   E L   
Sbjct: 235 LNAVVYIGTRPTF-GAGERLLEVSILDERLELYGEVIRVDLLGFIREDRVFASAEALTRQ 293

Query: 298 MGEDEKKARKILESS 312
           +  D   AR  L  +
Sbjct: 294 IALDVDAARAQLRDA 308


>gi|227499039|ref|ZP_03929176.1| riboflavin biosynthesis protein ribF [Acidaminococcus sp. D21]
 gi|226904488|gb|EEH90406.1| riboflavin biosynthesis protein ribF [Acidaminococcus sp. D21]
          Length = 312

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 13/310 (4%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNP 57
           M +   + E+NQ++   L     A+G FDG+H GH  ++   +A    +     V +F+ 
Sbjct: 1   MQIITTLDELNQAV---LPPSAAALGTFDGLHRGHQKVIHTTRAYAKEHGLSSLVFTFSN 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP   ++       L     +  +LE+MG   L    FT E A+ SA+ F+  +  +   
Sbjct: 58  HPLAFLKPEKEPPRLLSNPDKIALLEEMGIDILCNIPFTRELADLSADGFLTLLEDK--G 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ V  GT F FG    G+   L K  EKY   T+    L      ++SS+ IR A+ +G
Sbjct: 116 VRAVGIGTNFSFGAGGTGNVDFLNKVHEKYEL-TILTSPLLTLDGCVISSTQIRRAIGEG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQ 235
            +  A  +LG  + I   V+HG+K GRTLGFPTAN+ L      + + GVYA   + +  
Sbjct: 175 QIHKANFMLGRPYVIHGTVVHGDKRGRTLGFPTANISLMNAKIAIPQYGVYAGLVKAKG- 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + N G NPT      + LE+ +F F + +YG+  TV   + +R EI+F   E+L 
Sbjct: 234 AWYKAMLNVGNNPTF-DTEDIRLEAHLFGFDRNLYGETITVKLMEKIRDEIRFSSAEQLI 292

Query: 296 IYMGEDEKKA 305
             M +D+K  
Sbjct: 293 RQMEKDKKAT 302


>gi|296274830|ref|ZP_06857337.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MR1]
          Length = 323

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 170/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T+ + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTIIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|301307689|ref|ZP_07213646.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 20_3]
 gi|300834363|gb|EFK64976.1| riboflavin biosynthesis protein RibF [Bacteroides sp. 20_3]
          Length = 306

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 6/293 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+HLGH  ++++  +IA   N P  V++F  HPR ++ +      L+    +
Sbjct: 16  VATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + LE  G    I   FT+E +  SA++FI  +L + L VKT++ G   RFG DR     
Sbjct: 76  LQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFE 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                G + G   +      +  +  VSSS IR  L  G+V  AA+LL Y + +   ++ 
Sbjct: 136 QYVVYGTECGIEVLKASPY-DEGNTAVSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVS 194

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRTLGFPTAN+++     ++   GVYA+    +    Y G+   G  PT+     +
Sbjct: 195 GYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEG-ERYKGMLYIGDRPTLNNGKDI 253

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +E  I DFS +IY     VSF  Y+R +IKF  +E+LK  + +D      +L
Sbjct: 254 SMEVNILDFSGDIYNDSIRVSFVQYVRRDIKFDSLEELKAQLEKDRCTVNNLL 306


>gi|257463770|ref|ZP_05628158.1| FMN adenylyltransferase [Fusobacterium sp. D12]
 gi|317061314|ref|ZP_07925799.1| riboflavin kinase [Fusobacterium sp. D12]
 gi|313686990|gb|EFS23825.1| riboflavin kinase [Fusobacterium sp. D12]
          Length = 321

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 10/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH  I+ +A +     N    V +F  H
Sbjct: 1   MKVIKNI---LEIKENLQKSYVAIGNFDGLHTGHRTIIRKARERAEEKNGVSVVFTFQNH 57

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT   A+ +  +F+ K+L + L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQNFADLTPLEFV-KLLKQKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ +  G  F FGK        L   G   G     +  + + +   +SS+ IR ++  G
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGRGQGICVHELKAITSGEEV-ISSTLIRKSMMTG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               A  LLG+   +  +V+HG+KI R LGFPTAN+Q+   +    G+Y  + + + +  
Sbjct: 176 QFAKALKLLGHPMIVIGEVVHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQLEGEDR 235

Query: 238 YS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+ P G   LE  I DF ++IYG++  +   +YLR E KF  +E+L  
Sbjct: 236 IRYGVINVGVNPTLKP-GEFSLEVHILDFDEDIYGKKMYIELMEYLRKEEKFDSVEELIA 294

Query: 297 YMGEDEK 303
            +  D  
Sbjct: 295 CIANDVA 301


>gi|49486111|ref|YP_043332.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|49244554|emb|CAG42983.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
          Length = 323

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V       QS   + +   +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 1   MKVIEVTHPIQSKQYNTEDVAMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|15924262|ref|NP_371796.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926855|ref|NP_374388.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus N315]
 gi|21282884|ref|NP_645972.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus MW2]
 gi|57651842|ref|YP_186148.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus COL]
 gi|82750873|ref|YP_416614.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus RF122]
 gi|87161758|ref|YP_493862.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194982|ref|YP_499782.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221393|ref|YP_001332215.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156979593|ref|YP_001441852.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161509438|ref|YP_001575097.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142506|ref|ZP_03566999.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253316408|ref|ZP_04839621.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253731891|ref|ZP_04866056.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733490|ref|ZP_04867655.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006059|ref|ZP_05144660.2| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257425326|ref|ZP_05601751.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257427987|ref|ZP_05604385.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257430620|ref|ZP_05607002.1| riboflavin kinase/FAD synthase ribC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433380|ref|ZP_05609738.1| riboflavin kinase/FAD synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436222|ref|ZP_05612269.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M876]
 gi|258423887|ref|ZP_05686772.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9635]
 gi|258434814|ref|ZP_05688888.1| riboflavin kinase/FAD synthase [Staphylococcus aureus A9299]
 gi|258444610|ref|ZP_05692939.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A8115]
 gi|258452571|ref|ZP_05700577.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A5948]
 gi|262048161|ref|ZP_06021048.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus D30]
 gi|262051334|ref|ZP_06023557.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus
           930918-3]
 gi|269202889|ref|YP_003282158.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892760|ref|ZP_06300995.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8117]
 gi|282910844|ref|ZP_06318647.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914049|ref|ZP_06321836.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M899]
 gi|282916532|ref|ZP_06324290.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus D139]
 gi|282918971|ref|ZP_06326706.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C427]
 gi|282920516|ref|ZP_06328237.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9765]
 gi|282924094|ref|ZP_06331770.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C101]
 gi|284024265|ref|ZP_06378663.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501081|ref|ZP_06666932.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293526629|ref|ZP_06671314.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M1015]
 gi|297208082|ref|ZP_06924513.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912163|ref|ZP_07129606.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381164|ref|ZP_07363817.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13701072|dbj|BAB42367.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus N315]
 gi|14247042|dbj|BAB57434.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21204323|dbj|BAB95020.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus subsp.
           aureus MW2]
 gi|57286028|gb|AAW38122.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus COL]
 gi|82656404|emb|CAI80823.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus RF122]
 gi|87127732|gb|ABD22246.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87202540|gb|ABD30350.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374193|dbj|BAF67453.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721728|dbj|BAF78145.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160368247|gb|ABX29218.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253724301|gb|EES93030.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728544|gb|EES97273.1| riboflavin kinase / FAD synthase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257271783|gb|EEV03921.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274828|gb|EEV06315.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278748|gb|EEV09367.1| riboflavin kinase/FAD synthase ribC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281473|gb|EEV11610.1| riboflavin kinase/FAD synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284504|gb|EEV14624.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M876]
 gi|257845916|gb|EEV69945.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9635]
 gi|257849175|gb|EEV73157.1| riboflavin kinase/FAD synthase [Staphylococcus aureus A9299]
 gi|257850103|gb|EEV74056.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A8115]
 gi|257859789|gb|EEV82631.1| riboflavin biosynthesis protein ribF [Staphylococcus aureus A5948]
 gi|259160709|gb|EEW45730.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus
           930918-3]
 gi|259163727|gb|EEW48282.1| riboflavin kinase / FAD synthase ribC [Staphylococcus aureus D30]
 gi|262075179|gb|ACY11152.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269940763|emb|CBI49145.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282314066|gb|EFB44458.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316781|gb|EFB47155.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C427]
 gi|282319019|gb|EFB49371.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus D139]
 gi|282322117|gb|EFB52441.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325449|gb|EFB55758.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282594178|gb|EFB99165.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9765]
 gi|282764757|gb|EFC04882.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8117]
 gi|283470487|emb|CAQ49698.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ST398]
 gi|290920701|gb|EFD97764.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096086|gb|EFE26347.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|296887325|gb|EFH26227.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886409|gb|EFK81611.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332878|gb|ADL23071.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302751095|gb|ADL65272.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340147|gb|EFM06088.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312438348|gb|ADQ77419.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312829666|emb|CBX34508.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315198514|gb|EFU28843.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320140911|gb|EFW32758.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144373|gb|EFW36139.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329727796|gb|EGG64247.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733553|gb|EGG69881.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 323

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|168698908|ref|ZP_02731185.1| probable riboflavin kinase (FAD synthetase) [Gemmata obscuriglobus
           UQM 2246]
          Length = 312

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 92/311 (29%), Positives = 145/311 (46%), Gaps = 5/311 (1%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTII 63
           +++ ++  P    GG V +GNFDG+H GH  ++  A + A+    P  V++F   P  ++
Sbjct: 5   HLDWSEYPPPEFTGGAVTVGNFDGVHRGHQALVAAAREQADRVRGPAVVVTFGTPPHQVL 64

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              S    L+  + + ++L   G   ++  +        S E F + V+   L  + V+ 
Sbjct: 65  HPGSERPPLTTIARRAELLHAAGADHVVVLRTGPALLALSPEAFFEDVIARQLGARAVVE 124

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG+ RAG    L+      G     + ++     + VSSS +R AL  G V  AA
Sbjct: 125 GYDFRFGRGRAGTNETLRALCAGAGLAFAELAQV-AFAGEPVSSSRVRGALVGGDVARAA 183

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LL   + I   V+ G + GRT+GFPTAN+     +L   GVYA+R        +   AN
Sbjct: 184 ELLARPYRIAGTVVTGARRGRTIGFPTANLGDVATLLPGNGVYAVRALVNG-VPHPAAAN 242

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT   +    +E  +  F+ ++YGQ  TV F   LR    F    +L   +  D +
Sbjct: 243 VGPNPTFGEDA-RKIEVHLIGFAGDLYGQELTVEFVSRLRETRPFGGAAELVEQLKRDIE 301

Query: 304 KARKILESSYP 314
            A ++L  S P
Sbjct: 302 HATRVLGVSQP 312


>gi|218258460|ref|ZP_03474827.1| hypothetical protein PRABACTJOHN_00482 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225432|gb|EEC98082.1| hypothetical protein PRABACTJOHN_00482 [Parabacteroides johnsonii
           DSM 18315]
          Length = 308

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 98/298 (32%), Positives = 152/298 (51%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V  IG FDG+HLGH  ++ +  ++A     P  V++F  HPR ++ +      L+  
Sbjct: 13  KRLVATIGFFDGVHLGHRFLIHELKQVAEAAGLPSAVITFPEHPRAVLHADYQPKLLNSF 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L   G    I   FTLE +  +A++FI  VL + L V T++ G   RFG +R  
Sbjct: 73  EEKLKHLASTGIDYCIVLDFTLELSRLTAKEFITTVLADRLHVDTLLIGYDHRFGHNRED 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                   G+ YG   +   +    ++  VSSS IR  L +  V  AAHLL Y + +   
Sbjct: 133 GFEQYVTYGKNYGIRVIKASQYSEGEA-AVSSSEIRKLLAECRVEEAAHLLTYPYGLRGS 191

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           ++ G K+GR LGFPTAN+Q+     I+   GVYA+R    ++  Y G+   G  PT+   
Sbjct: 192 IVSGYKVGRKLGFPTANIQVDEPFKIIPGIGVYAVRVY-LNEQRYKGMLYIGNRPTLDNG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + LE  I +FS +IY    TV+F  ++R +IKF  +++L   + +D +   +IL  
Sbjct: 251 DNITLEVNILNFSGDIYNNEITVAFIQHVRGDIKFNSLDQLIDQLKKDRETVDRILTE 308


>gi|198282849|ref|YP_002219170.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218668108|ref|YP_002425049.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247370|gb|ACH82963.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218520321|gb|ACK80907.1| riboflavin biosynthesis protein RibF [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 310

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 149/314 (47%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQ--SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           MH F +   N+   LP       V+IGNFDG+H GH  +L+      +  P  VL+F P 
Sbjct: 1   MHSFLHHRSNRAADLPQ-----AVSIGNFDGVHRGHQALLKTM--QDSGLPTAVLTFEPL 53

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   +++     LS    +   L   G  ++    F    AN  AE FI ++LV  L  
Sbjct: 54  PREFFRAADAPPRLSSLREKVVALRHNGVQSITCLPFNQALANLPAEDFITQILVRQLCC 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFG  R GD  +L + G +YGF          +  Q VSS+ IR  L  G 
Sbjct: 114 GLLSVGHDFRFGARRRGDLDMLSRFGRQYGFSVKEQPPFLLD-GQRVSSTGIRAFLQSGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +AA  LG  + +   V+HG+ +GR LGFPTAN+ L+   +  +G++A R  +      
Sbjct: 173 LTHAASWLGRPYALCGRVVHGDHLGRELGFPTANIPLNRRPVPVKGIFAGRLLSPKGNWI 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + V + G  PT+     ++LE+   D    ++YGQ+ +V     LR E K+ D++ LK  
Sbjct: 233 AAV-SIGLRPTV-GGKQMVLEAHCLDADSPDLYGQQVSVELHHKLRDEEKYMDLDTLKAA 290

Query: 298 MGEDEKKARKILES 311
           +  D    R     
Sbjct: 291 IDNDVVNTRNFFAE 304


>gi|268598228|ref|ZP_06132395.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268582359|gb|EEZ47035.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           MS11]
          Length = 319

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAARTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|329313942|gb|AEB88355.1| Riboflavin biosynthesis protein ribF [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 323

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSIEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|268596102|ref|ZP_06130269.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|268681356|ref|ZP_06148218.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268549890|gb|EEZ44909.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|268621640|gb|EEZ54040.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           PID332]
          Length = 319

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVVFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|268685833|ref|ZP_06152695.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626117|gb|EEZ58517.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 319

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|148267762|ref|YP_001246705.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393821|ref|YP_001316496.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH1]
 gi|257795672|ref|ZP_05644651.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9781]
 gi|258416075|ref|ZP_05682343.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9763]
 gi|258421658|ref|ZP_05684582.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9719]
 gi|258447557|ref|ZP_05695701.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6300]
 gi|258449399|ref|ZP_05697502.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6224]
 gi|258454778|ref|ZP_05702742.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A5937]
 gi|282927614|ref|ZP_06335230.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A10102]
 gi|295406209|ref|ZP_06816016.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8819]
 gi|297244437|ref|ZP_06928320.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8796]
 gi|147740831|gb|ABQ49129.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946273|gb|ABR52209.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus JH1]
 gi|257789644|gb|EEV27984.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9781]
 gi|257839223|gb|EEV63699.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9763]
 gi|257842344|gb|EEV66769.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9719]
 gi|257853748|gb|EEV76707.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6300]
 gi|257857387|gb|EEV80285.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A6224]
 gi|257863161|gb|EEV85925.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A5937]
 gi|282590617|gb|EFB95694.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A10102]
 gi|285816954|gb|ADC37441.1| Riboflavin kinase / FMN adenylyltransferase [Staphylococcus aureus
           04-02981]
 gi|294968797|gb|EFG44819.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8819]
 gi|297178467|gb|EFH37713.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A8796]
 gi|315131066|gb|EFT87050.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727059|gb|EGG63515.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 323

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKTEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|239998199|ref|ZP_04718123.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae 35/02]
 gi|240117201|ref|ZP_04731263.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID1]
          Length = 306

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|294675249|ref|YP_003575865.1| riboflavin biosynthesis protein RibF [Prevotella ruminicola 23]
 gi|294473324|gb|ADE82713.1| riboflavin biosynthesis protein RibF [Prevotella ruminicola 23]
          Length = 315

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 146/317 (46%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F++I+    +P         IG FDG+H GH  +++Q +     +     V++F+  
Sbjct: 1   MEIFYDIKDTMIVPE----CAATIGVFDGVHAGHRQVIKQMMDEAQQHGYKSMVITFDKL 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         ++    + ++L ++G   L+   F ++ A  +A +F+ ++L E L V
Sbjct: 57  PQQLFVPGFQAQLITTLDEKIQLLGELGIDYLVVLPFDMQIAQLTAREFMAQILHERLNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTAL-TK 176
           K +  G   +FG+ R    G   + G+    H     E+  +     VSSS IR  +  +
Sbjct: 117 KALCIGYDNQFGRGRMETFGDYVEYGKALNIHVFKAMEVCPDGFDVPVSSSLIRHLITEE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQD 234
           G     + +L + + +   V+ GE IG  LG+PTAN+       ++  +GVYA+      
Sbjct: 177 GKAFEVSQMLKHYYKLTGRVVAGEHIGTGLGYPTANVVPDNAEKLIPADGVYAVLASIDG 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 + N G+ PT        LE  I DF  ++YG++  +SF   +R E  F   ++L
Sbjct: 237 SEPMQAMMNIGKRPTFN-GKQRTLEVNILDFKGDLYGKQVAISFVKLVRLEQHFSSADEL 295

Query: 295 KIYMGEDEKKARKILES 311
           K  + +DE   R I E 
Sbjct: 296 KRQIEKDEVLIRDIFEK 312


>gi|305681221|ref|ZP_07404028.1| riboflavin biosynthesis protein RibF [Corynebacterium matruchotii
           ATCC 14266]
 gi|305659426|gb|EFM48926.1| riboflavin biosynthesis protein RibF [Corynebacterium matruchotii
           ATCC 14266]
          Length = 322

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 19/324 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++H I     +P  L G VV IG FDG+H GH  +L  A   A+    P  +L+F+PH
Sbjct: 1   MDIWHGI---TEVPKDLTGSVVTIGVFDGMHRGHSRLLAAATTRAHELGLPSILLTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++       L   + +  +    G   ++   F +  A  S E+F  +++ + L+ 
Sbjct: 58  PLAVLRPDRMPPLLGTVTQRASLAAAQGIDHILAMSFNVAVAQLSPEEFFLQIVRDTLKA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G+ F FGK  AG   +L++ G KYG     ID L  + +  + S+ IR  L +G 
Sbjct: 118 RAVVVGSNFTFGKKAAGTTEVLRELGHKYGIEVHVIDLLVEDDAV-ICSTLIRRLLGEGK 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ- 235
           V  A   LG  F++  +V+ G    GR LGFPTAN+  S  + L ++ VYA       Q 
Sbjct: 177 VREANAALGREFSVAGEVVRGAGRGGRELGFPTANLYFSDLVALPQDAVYAGWLMVISQA 236

Query: 236 ---------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
                      Y    + G NPT   +    +ES++   + ++YG    V F D++R   
Sbjct: 237 PIDGDMKQGVRYPAAISVGHNPTF-GDKRRSVESYVIGKNADLYGHTVVVEFVDWVRSME 295

Query: 287 KFKDIEKLKIYMGEDEKKARKILE 310
           KF  + +L   + +D  +  +ILE
Sbjct: 296 KFTGVPELLAAIHQDVAETLRILE 319


>gi|124026397|ref|YP_001015512.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL1A]
 gi|123961465|gb|ABM76248.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL1A]
          Length = 317

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 6/306 (1%)

Query: 7   IEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           I I    P + K    +A+G+FDG+HLGH  ++   +K     P TV+SF PHPR ++  
Sbjct: 11  ILIPLCAPENAKLPTALALGSFDGLHLGHKKVINAILKEPIGVP-TVVSFWPHPREVLFG 69

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            S +  L  P+ +  +LE +G   L+   F    A+ SAE F+++VLV+ L  K +  G 
Sbjct: 70  ESRL-RLDLPNEKTFLLEPLGIEQLVLVPFNKNLASKSAETFVEEVLVKTLHAKHIAVGE 128

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG++R GD   L+K G   G     +  + +N  + +SSS +R AL  G + +A HL
Sbjct: 129 NFRFGRNREGDTSTLKKIGTSLGIKISIVPIVEDNHGR-LSSSRVRKALNDGDLKHAKHL 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT-SYSGVAN 243
           L   +T    V  G  +G+ +G+PTAN+++     L   GVYA      ++   +  V N
Sbjct: 188 LERPYTFSGTVEKGRGLGKKIGWPTANLKIDGRKFLPSLGVYAAWASIANKKERFLAVMN 247

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+ PN    +E  + D    + G    +     +R + KF +IE L   +  D K
Sbjct: 248 MGPQPTIDPNSLSAVEVHLLDKEINLLGHELIIEPVQRIRLQKKFDNIESLSKQISSDAK 307

Query: 304 KARKIL 309
            A++IL
Sbjct: 308 LAKEIL 313


>gi|225851489|ref|YP_002731723.1| riboflavin biosynthesis protein RibF [Persephonella marina EX-H1]
 gi|225644971|gb|ACO03157.1| riboflavin biosynthesis protein RibF [Persephonella marina EX-H1]
          Length = 306

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 11/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V      ++ LP + K  V  IG+FDG H GH  IL    K     N    V++F+PH
Sbjct: 1   MKVI----TDRDLPLNEK-TVCTIGSFDGFHKGHVEILNLVKKRAKEKNLRSLVITFDPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+  +        ++  + +  +L +     +   KF       +A+QF++ + VE L  
Sbjct: 56  PKKFLNPDKAPCLITDINTKIDLLSRKSIDFVYVIKFDQNFLKKTADQFLRFL-VEKLGC 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +I G  +RFG  + GD    +++ E+ GF    +D ++ +  + +SS+ IR+ L +G 
Sbjct: 115 RHIIVGYDWRFGYMKEGDIEYAKRKSEELGFTIEVVDPIKED-GERISSTLIRSLLREGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A+  LG  + I+  ++ G+  G+ LGFPT N+   PD+ LK+GVYA  + + +   +
Sbjct: 174 IKEASKYLGRDYCIKGRIVKGDGKGKDLGFPTINIIPPPDLCLKKGVYAG-YVSFNCDQH 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             V NFG  PT+     L +E+ + D +     +   + F +Y+RPE KF+D ++L   +
Sbjct: 233 PAVINFGYRPTV-DGKKLFIEAHVIDKNINPESEYVRIFFKEYIRPEKKFEDTKQLSDQI 291

Query: 299 GEDEKKARKILE 310
            ED + A+KI+E
Sbjct: 292 KEDIEAAKKIVE 303


>gi|332883725|gb|EGK04005.1| riboflavin biosynthesis protein RibF [Dysgonomonas mossii DSM
           22836]
          Length = 313

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 7/301 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  +++Q  +       P  V++F  HPR ++Q       L     +
Sbjct: 16  VATIGFFDGVHTGHRYLIDQVKEEAAKRGLPSAVITFPVHPRKVLQKDYQPALLCGYDEK 75

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L   G    I   FT+E +  SA++F+Q +L E L V +++ G   RFG +R  D  
Sbjct: 76  IERLATTGIDYCICLDFTVEISQMSAKRFMQNILKEKLNVDSLVIGYDHRFGHNREDDFS 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++ G +     +    L     + VSSS IR  L +G++  A  LL Y +TI   ++ 
Sbjct: 136 DYERYGSEIKMQVIEAKAL--PGLEHVSSSRIRKLLAEGYIRKAGKLLSYNYTISGKIVE 193

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G K+GRT+GFPTAN+Q+     ++   G+YA+    +    Y G+   G+ PT+     +
Sbjct: 194 GFKVGRTIGFPTANIQIWETYKVVPAFGIYAVYVHVEGVK-YDGMLYIGKRPTLHNGDNI 252

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
            +E  +FDF  ++Y +  T  F D++RP+ KF DI  LK  +  D++   K++E+   L+
Sbjct: 253 SIEVNLFDFDGDLYNKTLTAEFLDFVRPDEKFSDIATLKDQISRDKETVIKVIENYKGLN 312

Query: 317 E 317
            
Sbjct: 313 T 313


>gi|325270072|ref|ZP_08136680.1| riboflavin biosynthesis protein RibF [Prevotella multiformis DSM
           16608]
 gi|324987657|gb|EGC19632.1| riboflavin biosynthesis protein RibF [Prevotella multiformis DSM
           16608]
          Length = 346

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 7/312 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ 64
           I I +     L      IG FDG+H GH  ++ + +  A  S     V++F+ HPR ++Q
Sbjct: 27  IYIKEGERPELPALAATIGFFDGVHRGHRFLIGRVVDEARRSRMASAVITFDRHPRQVLQ 86

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +      L+    + ++L +     ++   F    A  SA +F+ +VL   L V+ ++ G
Sbjct: 87  ADYQPELLTTLERKLQLLSETQVENILVLHFDRSLAALSARRFMDEVLRRQLNVRKLLIG 146

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG DRA       + G+  G   V  D       + VSSS IR  + +G + +A  
Sbjct: 147 YDNRFGHDRAEGFDDYVRYGQALGIGVVRADAFLP-GGEKVSSSVIRDRIRRGDIASANR 205

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSY-SGV 241
           LLGY +TIES ++ G   G  LGFPTAN+ ++    ++   GVYA+  R +D + +  G+
Sbjct: 206 LLGYAYTIESTIVRGYGNGHRLGFPTANLDMAACRLLIPAAGVYAVDVRQKDSSEWRRGM 265

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PT      + +E  IF F  ++Y +   VSF   +R E +F  +E L   + +D
Sbjct: 266 MNIGTRPTFN-GKAMSMEVNIFHFDGDLYDKPLAVSFIAKIRDERRFGSLEALAHQLEQD 324

Query: 302 EKKARKILESSY 313
            +    + ++  
Sbjct: 325 REAINHLFDAGQ 336


>gi|168187904|ref|ZP_02622539.1| riboflavin biosynthesis protein RibF [Clostridium botulinum C str.
           Eklund]
 gi|169294245|gb|EDS76378.1| riboflavin biosynthesis protein RibF [Clostridium botulinum C str.
           Eklund]
          Length = 308

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 90/291 (30%), Positives = 157/291 (53%), Gaps = 7/291 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   +A+G+FDG+H+GH  ++ + I++A   N+   V +F  HP TII+       +   
Sbjct: 14  ERTYIALGSFDGLHVGHMSLINKTIELAKKNNAKSMVFTFKNHPLTIIKKDMAPKLIIDN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ ++LEK G   +    F  E    S E FI+ + +     + ++ G  +RFG    G
Sbjct: 74  EVKSELLEKTGIDIVNYINFDDEFMKISPEDFIKNM-LNCYNAQGIVVGFNYRFGYKNLG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K  +K+GF    I+ ++ N   IVSSS IR  +++G+++ A   L   F ++  
Sbjct: 133 DIELLKKLSDKFGFELNIIEPVKIN-GDIVSSSKIRQLVSEGNIIKANKFLNRPFMLQGT 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+++GR + FPT N++ +   +L K GVY    +      Y G+ N G NPT+  + 
Sbjct: 192 VMHGKQLGRKMNFPTTNLKYNKKFVLPKGGVYYTCVKYNG-EKYKGITNIGYNPTV-SDK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E+ I  F +EIY +   V F + +R E KF  I++L   + +D++ A
Sbjct: 250 KLSIETHILGFQKEIYNENVKVYFCERIRDEKKFNSIKELANQLTKDKEFA 300


>gi|329118438|ref|ZP_08247144.1| riboflavin biosynthesis protein RibF [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465484|gb|EGF11763.1| riboflavin biosynthesis protein RibF [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 307

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 149/314 (47%), Gaps = 16/314 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M +F         P       V IGNFDG+HLGH  IL++    A+   +    + F P 
Sbjct: 1   MKIFPG-----DTPPPATPAAVTIGNFDGVHLGHLHILQRLRAEADARGLAAAAVVFEPQ 55

Query: 59  PRTIIQ---SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P           P   L+P   + ++L + G   A+   +F    +  SAE FI  VL  
Sbjct: 56  PAEFFARVSGREPPPRLTPLRDKLRLLRESGCVDAVRVLRFNRAFSQMSAEGFIDTVLRR 115

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + ++ G  FRFG+ RAGD G+L     +  F T     +     +  SS+ +R  L
Sbjct: 116 DLHTRYLLVGDDFRFGQGRAGDFGLLAA---QADFVTEQTPSILI-AGERASSTAVRGLL 171

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G +  A  + G+ +T+   V+HG+K+GRTLG PTAN+ L P      GV+A+    + 
Sbjct: 172 QAGRLDEARRVSGHDYTLSGRVVHGKKLGRTLGCPTANIHLPPHRYALSGVFAVEAEGRF 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T   G A+FG NPT+       LE  +  FS  +YG+R TV F   LR E KF  +++L
Sbjct: 232 GTR-RGAASFGFNPTVDGGAVQKLEVHLIGFSGNLYGERLTVRFLHKLRDEEKFSGLDEL 290

Query: 295 KIYMGEDEKKARKI 308
           +  + ED   AR  
Sbjct: 291 RARIHEDIAAARNW 304


>gi|323356811|ref|YP_004223207.1| FAD synthase [Microbacterium testaceum StLB037]
 gi|323273182|dbj|BAJ73327.1| FAD synthase [Microbacterium testaceum StLB037]
          Length = 314

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 162/317 (51%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA-IKIANNSPITVLSFNPHP 59
           M VF +      +P      VVAIG FDG+H GH  ++++A +  ++ + +  ++F+ +P
Sbjct: 1   MIVFRD---PAEVPADFGPSVVAIGKFDGVHTGHRAVIDRARVDASDGAQVVAVTFDRNP 57

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            ++++       +  P  +  +L++ G  A +   F    A   AE+F ++V+V+ L+ +
Sbjct: 58  LSVLRPDRCPPDVIGPHQKLDLLDRAGVDATLLLTFDEALAAIPAEEFARRVIVDALKAR 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKGH 178
           TV+ G  FRFG    GD  +L + G  +GF    +D++R  +  + VSS+ IR AL+ G 
Sbjct: 118 TVLVGRDFRFGAGGTGDPDLLTRMGAAHGFRVDVVDDVRAVHADRRVSSTWIREALSAGD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  AA LLG   ++  +V+HG K GR LG+PTAN+       +  +GVYA      +   
Sbjct: 178 VTTAARLLGRAPSVWGEVVHGLKRGRELGYPTANLSPDLEGFVPADGVYAGWLVDVEGGR 237

Query: 238 ---YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              Y    + G NPT        +E+++ D    ++YG    V F + +R    F  ++ 
Sbjct: 238 RISYPAAISVGTNPTFDDVHARQVEAYVLDETDLDLYGHHVEVRFVERVRGMTAFDGVDA 297

Query: 294 LKIYMGEDEKKARKILE 310
           L I M +D ++ R IL 
Sbjct: 298 LLIQMADDVERTRAILR 314


>gi|317129158|ref|YP_004095440.1| riboflavin biosynthesis protein RibF [Bacillus cellulosilyticus DSM
           2522]
 gi|315474106|gb|ADU30709.1| riboflavin biosynthesis protein RibF [Bacillus cellulosilyticus DSM
           2522]
          Length = 312

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 14/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           + + H  ++      +L    +A+G FDG+H GH  ++  A            V++F PH
Sbjct: 4   IQITHPHQL-----ENLPRLCLALGFFDGVHKGHQEVILTAKNEAKKRQLRSGVMTFFPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +++    ++ L+    +E ++ ++G   L    F    A  + +QF+ + L+  L V
Sbjct: 59  PKEVLRKEKKVYYLTLMKKKEALIRQLGIDYLFIVTFNETFAELNPQQFVDQYLI-ALNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  + +G+   G    L         +T       +   + +SS+NIR  L  G 
Sbjct: 118 KHVVAGFDYTYGRLGKGTMETLLFHSRNELTYTTVGQ--VSANGEKISSTNIRHFLQCGD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +  A   LG  +     VIHGEK GRT+GFPTAN+ L         GVY +R    ++  
Sbjct: 176 LKRANDYLGRPYETSGTVIHGEKRGRTIGFPTANVLLEERSFTPNSGVYIVRLLVNNEWK 235

Query: 238 YSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              V N G  PT      G   +E  + +F+ +IYG+  T+ +   LR E KF  I +LK
Sbjct: 236 -EAVCNVGYKPTFHKLREGEPTIEVHVTNFNDDIYGETVTIQWLSKLRDEKKFNSIGELK 294

Query: 296 IYMGEDEKKARKILE 310
             +  D     +  +
Sbjct: 295 AQLENDVNNMNEFFQ 309


>gi|240114917|ref|ZP_04728979.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID18]
 gi|260441268|ref|ZP_05795084.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI2]
          Length = 306

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAARTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|297584085|ref|YP_003699865.1| riboflavin biosynthesis protein RibF [Bacillus selenitireducens
           MLS10]
 gi|297142542|gb|ADH99299.1| riboflavin biosynthesis protein RibF [Bacillus selenitireducens
           MLS10]
          Length = 317

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 13/319 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +       + L  +L    VA+G FDG+H GH  ++E A + A        V++F PH
Sbjct: 1   MEIIRMKHPQRGL--NLPQLAVALGFFDGVHKGHQKVIEMAKEKAGELGVKSGVMTFYPH 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ +++  +   +  LS    + +++   G   LI  +F    A+ S +QF+ + L+   
Sbjct: 59  PKEVLRPETAKEVKYLSAIEDKAELIGFSGVDYLIIVEFDPRFADLSPQQFVDQYLIGQ- 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  V+ G  + +G+   G    L       G  T  I +   +  + +SS++IRTAL K
Sbjct: 118 NIVHVVAGFDYTYGRMGKGTMETLPFHSR--GMLTQTIVKKVASTKEKISSTSIRTALVK 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRT-QD 234
           G +      LG  +T+  +V HGEK GRT+GFPTAN+ +    L    GVYA+      D
Sbjct: 176 GDIRKVNDYLGRLYTLSGNVEHGEKRGRTIGFPTANVSVDDKTLTPAPGVYAVTANVEGD 235

Query: 235 QTSYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              Y+G+ N G  PT     P   +LE  +FDFS+ IY    TV F D++R E+KF  ++
Sbjct: 236 SFEYTGICNIGFKPTFHDEKPDAPVLEIHLFDFSKTIYDTHITVYFHDFVRGEVKFSGVD 295

Query: 293 KLKIYMGEDEKKARKILES 311
           +L   + +D  + +     
Sbjct: 296 ELVDQIKKDVDQVKTFFSD 314


>gi|325131482|gb|EGC54189.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis M6190]
 gi|325137587|gb|EGC60168.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           ES14902]
          Length = 306

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+  +    LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRQIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|312793242|ref|YP_004026165.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180382|gb|ADQ40552.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 305

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     A+     V +F  HP 
Sbjct: 1   MNVYEIVEKRYDSP------AVALGFFDGFHIGHKKLFEVLNANASGIKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--YILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY +     D   Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVY-VTNTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG++  + F D++R E KF +I +LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDLYGKQVKIEFIDFVREEKKFSNINELKNQIA 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|72382678|ref|YP_292033.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. NATL2A]
 gi|72002528|gb|AAZ58330.1| riboflavin kinase / FMN adenylyltransferase [Prochlorococcus
           marinus str. NATL2A]
          Length = 317

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 6/306 (1%)

Query: 7   IEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           I I    P + K    +A+G+FDG+HLGH  +++  +K     P TV+SF PHPR ++  
Sbjct: 11  ILIPLCAPENAKLPTALALGSFDGLHLGHKKVIKAILKEPIGVP-TVVSFWPHPREVLFG 69

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            S +  L  P+ +  +LE +G   L+   F    A+ SAE F+++VLV+ L  K +  G 
Sbjct: 70  ESRL-RLDLPNEKTFLLEPLGIEQLVLVPFNKNLASKSAETFVEEVLVKTLHAKHIAVGE 128

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG++R GD   L+K G   G     +  + +N  + +SSS +R AL  G + +A +L
Sbjct: 129 NFRFGRNREGDTSTLKKIGTSLGIKISIVPIVEDNHGR-LSSSRVRKALNDGDLKHAKYL 187

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT-SYSGVAN 243
           L   +T    V  G  +G+ +G+PTAN+++     L   GVYA       +   +  V N
Sbjct: 188 LKRPYTFRGTVEKGRGLGKKIGWPTANLKIDGRKFLPSLGVYAAWASIASKKERFLAVMN 247

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+ PN    +E  + D    + G    +     +R + KF +IE L   +  D K
Sbjct: 248 MGPQPTIDPNSLSAVEVHLLDKEINLLGHELIIEPVQRIRLQKKFDNIEALSKQISSDAK 307

Query: 304 KARKIL 309
            A++IL
Sbjct: 308 LAKEIL 313


>gi|49483435|ref|YP_040659.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|282903827|ref|ZP_06311715.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C160]
 gi|282905590|ref|ZP_06313445.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908565|ref|ZP_06316395.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|283958015|ref|ZP_06375466.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295427759|ref|ZP_06820391.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297591283|ref|ZP_06949921.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus MN8]
 gi|49241564|emb|CAG40250.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|282327627|gb|EFB57910.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330882|gb|EFB60396.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595445|gb|EFC00409.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus C160]
 gi|283790164|gb|EFC28981.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|295128117|gb|EFG57751.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297576169|gb|EFH94885.1| bifunctional riboflavin kinase/FAD synthase RibC [Staphylococcus
           aureus subsp. aureus MN8]
 gi|315194160|gb|EFU24553.1| putative riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 323

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 170/320 (53%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  +++ +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVNK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|312622697|ref|YP_004024310.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203164|gb|ADQ46491.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 305

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 154/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     A+     V +F  HP 
Sbjct: 1   MNVYEIVEKRYDNP------AVALGFFDGFHIGHKKLFEVLNANASGIKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--YILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLYQFGRECIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY +     D   Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVY-VTNTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSTSDNIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIT 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|240013383|ref|ZP_04720296.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae DGI18]
 gi|240120454|ref|ZP_04733416.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID24-1]
          Length = 306

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAARTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|283770336|ref|ZP_06343228.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus H19]
 gi|283460483|gb|EFC07573.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus H19]
          Length = 323

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 LKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|222475487|ref|YP_002563904.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Florida]
 gi|254995295|ref|ZP_05277485.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Mississippi]
 gi|222419625|gb|ACM49648.1| riboflavin kinase / FAD synthetase protein (ribF) [Anaplasma
           marginale str. Florida]
          Length = 303

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 12/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +  E  +++        +  GNFDGIHLGH  I  +  + A     P  VL+F+PH
Sbjct: 1   MEVLYGHEGKEAV-------ALTFGNFDGIHLGHVQIFAELTRRAAELSLPSAVLTFSPH 53

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               ++     F L     + +++E  G   L   +F  E A  S + FI  VLV   + 
Sbjct: 54  TAAFLRQRKN-FLLVDFEHKVELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKA 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G    FG   AG+   L+      G+    + +   +  +  SSS IR  L  G 
Sbjct: 113 RHVVVGKDCVFGHKCAGNLKSLELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG R  +   V+ G   G+ +GFPT N+ +   +L K GVY  R R      +
Sbjct: 172 IETANLLLGRRHVVSGRVLKGRGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYW 231

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GV N G  PT       LLE  +FDF  ++YG+   V    +LRPE KF ++++L   
Sbjct: 232 LPGVVNIGTRPTFAEEICPLLEMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQ 291

Query: 298 MGEDEKKARK 307
           + +D  + ++
Sbjct: 292 IEQDISRVKQ 301


>gi|293397733|ref|ZP_06641939.1| riboflavin biosynthesis protein RibF [Neisseria gonorrhoeae F62]
 gi|291611679|gb|EFF40748.1| riboflavin biosynthesis protein RibF [Neisseria gonorrhoeae F62]
          Length = 319

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 21  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 80

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 81  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRHFSEISAQAFIDRLLRQTLNTRYLLVG 140

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 141 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 194

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 195 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 253

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 254 SFGFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 313

Query: 303 KKAR 306
           + A+
Sbjct: 314 EAAK 317


>gi|269958476|ref|YP_003328263.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
 gi|269848305|gb|ACZ48949.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
          Length = 303

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 12/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +  E  +++        +  GNFDGIHLGH  I  +  + A     P  VL+F+PH
Sbjct: 1   MEVLYGHEGKEAV-------ALTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPH 53

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               ++     F L     + +++E  G   L   +F  E A  S + FI  VLV   + 
Sbjct: 54  TAAFLRQRKN-FLLVDFEHKVELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKA 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G    FG   AG+   L+      G+    + +   +  +  SSS IR  L  G 
Sbjct: 113 RHVVVGKDCVFGHKCAGNLKSLELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG R  +   V+ G   G+ +GFPT N+ +   +L K GVY  R R      +
Sbjct: 172 IETANLLLGRRHVVSGRVLKGRGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYW 231

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GV N G  PT       LLE  +FDF  ++YG+   V    +LRPE KF ++++L   
Sbjct: 232 LPGVVNIGTRPTFAEEICPLLEMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQ 291

Query: 298 MGEDEKKARK 307
           + +D    ++
Sbjct: 292 IAQDISDVKQ 301


>gi|325129575|gb|EGC52399.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis
           OX99.30304]
 gi|325197663|gb|ADY93119.1| riboflavin biosynthesis protein RibF [Neisseria meningitidis G2136]
          Length = 306

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVTVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P   +SP   + ++LE  G   A+   +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  RMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  + +LK  +  D 
Sbjct: 241 SFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMAELKRQIAADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|307565824|ref|ZP_07628285.1| riboflavin biosynthesis protein RibF [Prevotella amnii CRIS 21A-A]
 gi|307345448|gb|EFN90824.1| riboflavin biosynthesis protein RibF [Prevotella amnii CRIS 21A-A]
          Length = 313

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 10/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + +   +N  + N+L   V  IG FDG+H GH  ++E+  + A        V++F+ H
Sbjct: 1   MKIIY---LNDEVNNYLPPLVATIGFFDGVHRGHRFLIEEVKQKARFSGMQSAVITFDNH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++     +  LS  + + K++E  G    I   F    +   A+ F+Q +L E L V
Sbjct: 58  PRQVLHPHQHLSLLSSFTQKIKLIEATGVDICIILHFDKALSLLHAKDFMQSILSERLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G   +FG          Q+ G++ G   +   EL +NK + +SSS IR  +T G 
Sbjct: 118 TKLIIGYDNKFGYGCKESFDDYQRYGQELGIEVIKATELNSNK-EHISSSVIRRLITLGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRT-QDQ 235
           +  A   LGY + IE  VI G   G  LG+PTAN+       ++  EGVYA++ +T    
Sbjct: 177 IKAANKALGYNYVIEGQVIEGYHNGHKLGYPTANIDRKTCFQLIPAEGVYAVKVKTDLSP 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
              +G+   G  PT      L +E+ IF+F+  +YG    VSF   +R + KF  +  L 
Sbjct: 237 LWLNGMLYIGVRPTYN-GKTLCIETNIFNFNNSLYGHNIKVSFIQRVRGDRKFDTLSALS 295

Query: 296 IYMGEDEKKARKILESS 312
             +  D+K+  +IL+ S
Sbjct: 296 SQLANDKKQCEEILKES 312


>gi|332830218|gb|EGK02846.1| riboflavin biosynthesis protein RibF [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 313

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 7/309 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQ 64
           + I++         V  IG FDG+H GH  +++Q  +       P  V++F  HPR ++Q
Sbjct: 2   LLIDKDHKLQHAPLVATIGFFDGVHTGHRFLIDQVKEEAAKRGLPSAVITFPVHPRKVLQ 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L   G    +   FT E +  SA +F++ +L + L V T++ G
Sbjct: 62  KDYQPALLCGFDEKTERLATTGVDYCVCLDFTTEISQLSAREFMKDILKDKLSVNTLVIG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG +R       ++ G + G + +   EL     + VSSS IR  L +G++  AA 
Sbjct: 122 YDHRFGHNREDGFADYKRYGSEIGINVIEAREL--PGEEHVSSSRIRKLLAEGYIRKAAK 179

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVA 242
           LL Y +TI   ++ G K+GRT+GFPTAN+Q+     ++   GVYA+    + Q  Y G+ 
Sbjct: 180 LLSYNYTISGKIVEGFKVGRTIGFPTANIQVWETYKVIPAFGVYAVYVHVEGQ-RYDGML 238

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
             G+ PT+     + +E  +F+F  ++Y +  T  F D++RP+ KF DI+ LK  +G D+
Sbjct: 239 YIGKRPTLHNGDNISIEVNLFNFDGDLYNKNLTAEFIDFVRPDEKFIDIDTLKKQIGNDK 298

Query: 303 KKARKILES 311
                ++E+
Sbjct: 299 DTVISVIEN 307


>gi|240079962|ref|ZP_04724505.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA19]
 gi|240122755|ref|ZP_04735711.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae PID332]
          Length = 306

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|240112171|ref|ZP_04726661.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae MS11]
          Length = 306

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVIFEPQPKEFFAARTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|222529047|ref|YP_002572929.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455894|gb|ACM60156.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 305

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 154/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +   +  P       VA+G FDG H+GH  + E     AN     V +F  HP 
Sbjct: 1   MNVYEMVAKREDTP------AVALGFFDGFHIGHKKLFEVLNANANGKKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--YILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSRYLCEKLYQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ K+GVY +     D   Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKIVPKKGVY-VTNTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIT 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|240127456|ref|ZP_04740117.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 306

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTTVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|329895215|ref|ZP_08270879.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC3088]
 gi|328922453|gb|EGG29795.1| Riboflavin kinase / FMN adenylyltransferase [gamma proteobacterium
           IMCC3088]
          Length = 292

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 3/291 (1%)

Query: 24  IGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+H GH  +L+  ++     + P TV+ F P P+  I+       +     + + 
Sbjct: 1   MGAFDGVHRGHQWVLKHLVERAQERDLPTTVVLFEPLPKEYIRPLEAPARIMNFREKTEA 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L + G   ++R  F       +AE FI  V  E +  K V+ G  FRFG DR GD  ++ 
Sbjct: 61  LAECGIDRVLRIHFNATVQQMTAESFIHDVFYEGIGAKYVVLGDDFRFGNDRQGDAELMT 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +RG++YGF           +   +SS+ IR  L +G    A  LLG RF +   V++G++
Sbjct: 121 RRGQRYGFDCAATPTF-EFEGDRISSTRIREVLAEGAFDEAERLLGRRFAMSGRVVYGKQ 179

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +GR LGFPTAN++L        GV+++       T    +AN G  PT+  +    LE  
Sbjct: 180 LGRQLGFPTANIRLHRLRAPVNGVFSVHVDGPGFTGAPAIANVGTRPTIDDSIEANLEVH 239

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + D + ++YG++  V+F   +R E+KF  I +LK  +  D    R+  +  
Sbjct: 240 LIDRNIDLYGKQIRVTFQHKVRDEMKFDGIHQLKERVLADIADTRRWFQEQ 290


>gi|295397099|ref|ZP_06807211.1| riboflavin biosynthesis protein RibF [Aerococcus viridans ATCC
           11563]
 gi|294974691|gb|EFG50406.1| riboflavin biosynthesis protein RibF [Aerococcus viridans ATCC
           11563]
          Length = 315

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   +     +    +    V+A+G FDG+H GH  +++ A   A+    P+ V++FN  
Sbjct: 1   MKTINLHHPFEQSTIYGGDVVLALGFFDGVHRGHQAVIQAARDEADRLQLPLAVMTFNMA 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR + Q   P  +  L+  + +E+++ ++G   L   + T   A    ++F+ + +V  L
Sbjct: 61  PRIMYQQIHPEGVTYLTTLAEKERLMTQLGVDYLYVTQLTSSFAALKPQEFVDQYMV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K+V+ G  + +GK    +   L        F+ + +++L  + S+ V S+ IR  L  
Sbjct: 120 HAKSVVAGFDYTYGKKDIANMRTLASHAAGR-FNIIEVNKLSEDTSK-VGSTEIRHDLNT 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ 235
           G +  A   LGY ++I+  V+HGEK GR LG+PTAN+ ++ + ++  EGVY +      Q
Sbjct: 178 GQIDKANQQLGYIYSIDGIVVHGEKRGRELGYPTANLMVAAESLIPVEGVYVVEMLLNGQ 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y GVA+ G N T   N    +E  + DF  EIYG+  TV +  YLRPE+KF  IE L 
Sbjct: 238 V-YPGVASIGTNITFGENRKRTVEIHLLDFKGEIYGEYVTVYWHKYLRPELKFDGIEGLI 296

Query: 296 IYMGEDEKKARKILES 311
             M +D   A   LES
Sbjct: 297 KQMDQDAVDAENYLES 312


>gi|323441052|gb|EGA98759.1| riboflavin biosynthesis protein [Staphylococcus aureus O11]
 gi|323443921|gb|EGB01532.1| bifuncational riboflavin kinase/FAD synthase [Staphylococcus aureus
           O46]
          Length = 323

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 168/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R  V++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVNVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|291536074|emb|CBL09186.1| riboflavin kinase/FMN adenylyltransferase [Roseburia intestinalis
           M50/1]
          Length = 309

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 7/296 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V+++G FDGIH GH L++E  A K        + +FN  PR  ++       L+    +
Sbjct: 16  TVLSLGKFDGIHRGHELLMEHLASKKEAGLAAVIFTFNIPPRKSVEQVEA-KVLTTNEEK 74

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I E++G   L+   FT E      E FI K+ V  L VK  + G+ F FG +R GD  
Sbjct: 75  MHIFEQIGIDYLVECPFTREIMCMEPEDFIAKI-VHQLHVKCFVVGSDFHFGHNRRGDYH 133

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+   +KYG+  + I++++ +K + +SS+ +R  + KG++  A HLLGY + +  +++H
Sbjct: 134 MLKDLSDKYGYEVLVINKMQEDK-RDISSTFVREEIAKGNIEKANHLLGYHYFVTGEILH 192

Query: 199 GEKI-GRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G  +    LG PT N     + LL E GVY    R  D++   GV N G  PT+    P+
Sbjct: 193 GRHLGSTKLGIPTINQIPPEEKLLPESGVYVTEVRLGDRSC-RGVTNVGVKPTIEGKNPV 251

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            +E+ + DF+ ++YG+  TV F   +R E KF  IE LK  M  +   AR   E +
Sbjct: 252 GVETHLLDFAGDLYGKVVTVEFLTRIREERKFSSIEALKEEMQNNIAYARAWFEKN 307


>gi|257068219|ref|YP_003154474.1| riboflavin kinase/FMN adenylyltransferase [Brachybacterium faecium
           DSM 4810]
 gi|256559037|gb|ACU84884.1| riboflavin kinase/FMN adenylyltransferase [Brachybacterium faecium
           DSM 4810]
          Length = 338

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 21/327 (6%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           ++H+++    +P  L    V+IGN+DG+H GH  +L+Q  +   A +     L+F PHPR
Sbjct: 6   IWHSVD---EVPAELGPTAVSIGNYDGVHRGHRFVLDQLRRHAQARSLAPVALTFWPHPR 62

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    L+    ++++L   G   ++  +FT + A YS E F++  LVE L VK 
Sbjct: 63  HVMGDPARTPLLTGHEDRDRLLLLAGMHGVLDLEFTHDFAQYSPEDFVRVFLVEGLGVKC 122

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGH 178
           V+ G    FG+  +GD G +++ G  +GF  V +DEL      +  +SSS IR+AL +G 
Sbjct: 123 VVLGEDALFGRGNSGDIGTMRELGRAFGFDVVTVDELGPEGTGTGRISSSGIRSALLEGE 182

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT----- 232
           V  A   LG   T+   V HG + G  LGFPTAN+  SP  ++  +GVYA          
Sbjct: 183 VETANEALGRLHTVTDVVHHGFRRGHELGFPTANLGPSPAGLIPADGVYAGYLTVTEQAP 242

Query: 233 --QDQTSYSGV---ANFGRNPTMVPNG--PLLLESFIF-DFSQEIYGQRCTVSFFDYLRP 284
                   +G     + G NPT   +G     +E+++  D   ++YG    + F  + RP
Sbjct: 243 SHLGVEPLAGAPATISIGTNPTFEADGAPRRTVEAYVHGDHDLDLYGDVVRLEFVAFQRP 302

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILES 311
            +KF  ++ L   M  D +  R+ L +
Sbjct: 303 TLKFDSVDSLIEQMDRDVEVTRRTLAA 329


>gi|189499381|ref|YP_001958851.1| riboflavin biosynthesis protein RibF [Chlorobium phaeobacteroides
           BS1]
 gi|189494822|gb|ACE03370.1| riboflavin biosynthesis protein RibF [Chlorobium phaeobacteroides
           BS1]
          Length = 321

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 8/310 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTI 62
            +    + +    +   V +G++DG+H GH  I+ Q  A   A      V++F PHPR I
Sbjct: 12  RDYYSGEEIDFAPEPSAVTVGSYDGVHAGHRRIISQMVASASARGLRTVVITFEPHPRKI 71

Query: 63  IQ--SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           +    S  I  L+    +  ++E++G   L    F    A  S+E FIQ+VL++ +  KT
Sbjct: 72  VNRDPSGQIRLLTLLEEKAVLIEELGVDWLFVVHFDRFFAAQSSESFIQQVLLDSIGAKT 131

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G    FG DR G    L++  E+  F  + +DE+R  +++  SS+ IR  L +G + 
Sbjct: 132 IVIGYDHGFGHDRKGGVSTLRRMAEQKRFDVLVVDEVR-LQAEHFSSTRIRALLGEGRIR 190

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSY 238
            A   LG  + I  DV+HGEK GR +GFPT N+++  S  +L K GVY       D   +
Sbjct: 191 EANLFLGAPYLISGDVVHGEKKGREIGFPTVNLRIGSSDKLLPKYGVYIA-TVIIDGRVF 249

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
             + N G  PT+      L E+ I     E+YG+R T    D +R E+KF   E L+  +
Sbjct: 250 KAMMNIGLRPTVSEGSSPLCEAHILGHKGELYGKRLTFHLLDRVRDEMKFPSFEALQEQL 309

Query: 299 GEDEKKARKI 308
            +D+K   + 
Sbjct: 310 KKDQKFVEQY 319


>gi|86157049|ref|YP_463834.1| FMN adenylyltransferase / riboflavin kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773560|gb|ABC80397.1| FMN adenylyltransferase / riboflavin kinase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 323

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/321 (30%), Positives = 156/321 (48%), Gaps = 16/321 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
            VF ++E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PHP
Sbjct: 6   QVFRSLE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRNAGVLTFEPHP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV 
Sbjct: 65  VRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFTARDLAGRLEVA 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+V
Sbjct: 125 DVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGNV 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-- 237
             AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R          
Sbjct: 183 EAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATTG-LLPANGVYVVRAELGGAHRET 241

Query: 238 -------YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
                  + GV N G  PT+      + E+ +FDF   ++YG    ++F   LR E +F 
Sbjct: 242 GLSGASVHGGVCNVGVKPTVESGASPVAEAHLFDFDGRDLYGTPMRLAFLARLRDEQRFP 301

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            +E L+  +  D + A ++L 
Sbjct: 302 SVEALRAQIARDVEAAHRVLA 322


>gi|146297071|ref|YP_001180842.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410647|gb|ABP67651.1| FMN adenylyltransferase / riboflavin kinase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 305

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+++  I      P       VA+G FDG H+GH  + E     AN     V +F  HP 
Sbjct: 1   MNIYQMILTRNDAP------AVALGFFDGFHMGHKKLFEVLTSSANQCKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +   + + +  EK     +   +F  E      ++FI+ +L+  L V  
Sbjct: 55  KLLGVDTK--YILTNNERLEFFEKYEIDDVYFIEFNNEFMQIDKDKFIEDILIRKLNVSL 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    G+   L ++ + +G   V I+ ++  + Q+VSS+ IR  +  G++ 
Sbjct: 113 VVVGYDFTFGYKAEGNSEYLCEKLKNFGRRCVIIEPVKY-QGQVVSSTLIRNLIMDGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYS 239
            A  +LGY F I+  V  G ++GR +GFPT N++     ++ K GVY +     D   Y 
Sbjct: 172 LANLMLGYNFFIKGIVKKGNRLGRKMGFPTLNIEFDKNKVVPKNGVY-VTNTIIDNKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+     + +E+ + DF +E YG+  TV F D++R E KF ++++LK  + 
Sbjct: 231 SLTNVGFNPTVSKTQNIKVETHVLDFEKEAYGKEITVEFVDFIRDEKKFVNLQELKSQIN 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 KDIEYVKALF 300


>gi|256762290|ref|ZP_05502870.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T3]
 gi|256683541|gb|EEU23236.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T3]
 gi|295112832|emb|CBL31469.1| riboflavin kinase/FMN adenylyltransferase [Enterococcus sp. 7L76]
 gi|315145602|gb|EFT89618.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX2141]
 gi|315160312|gb|EFU04329.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0645]
          Length = 316

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G + L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVNILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|222151112|ref|YP_002560266.1| riboflavin kinase [Macrococcus caseolyticus JCSC5402]
 gi|222120235|dbj|BAH17570.1| riboflavin kinase [Macrococcus caseolyticus JCSC5402]
          Length = 317

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 156/316 (49%), Gaps = 15/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           + + H IE         +   +A+G FDGIH GH  ++E  I IA N  +   V++F+PH
Sbjct: 4   IEMIHPIEQCYD----HEPCALAVGFFDGIHTGHQKVIETMICIAENKGLKKAVMTFDPH 59

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P   ++ ILE MG   L    FT   A      FI     +   
Sbjct: 60  PSVVLNPEKQRTDYLTPMQEKKHILETMGIDYLFIVPFTSSLAKMEEHDFISNYFTKN-H 118

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK V+ G  F +GK   G+   L+   +K GF+   + E      + VS+++IR  L  G
Sbjct: 119 VKEVVAGFDFTYGKYGKGNMLKLEA--DKEGFNVTTV-ERHALADEKVSTTSIRKDLMHG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            + +    LG  + I   V+ GEK GRT+GFPTAN++ + + +L + GVYA+  +     
Sbjct: 176 DIESVNAQLGRPYKITGLVVQGEKRGRTIGFPTANVEPNENFVLPRLGVYAVTLKLDQTG 235

Query: 237 S-YSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GV N G  PT        + +E  IFDF   IYG+R  + ++++LR E KF  I+ 
Sbjct: 236 KIYKGVCNVGVKPTFHDPEKQQVSIEVNIFDFKDSIYGERVEIEWYEFLRAEKKFDGIDS 295

Query: 294 LKIYMGEDEKKARKIL 309
           L   +  D+ +A +IL
Sbjct: 296 LIAQINADKAQAIEIL 311


>gi|56417122|ref|YP_154196.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. St. Maries]
 gi|255004600|ref|ZP_05279401.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. Virginia]
 gi|56388354|gb|AAV86941.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. St. Maries]
          Length = 303

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 12/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +  E  +++        +  GNFDGIHLGH  I  +  + A     P  VL+F+PH
Sbjct: 1   MEVLYGHEGKEAV-------ALTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPH 53

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               ++     F L     + +++E  G   L   +F  E A  S + FI  VLV   + 
Sbjct: 54  TAAFLRQRKN-FLLVDFEHKVELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKA 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G    FG   AG+   L+      G+    + +   +  +  SSS IR  L  G 
Sbjct: 113 RHVVVGKDCVFGHKCAGNLKSLELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG R  +   V+ G   G+ +GFPT N+ +   +L K GVY  R R      +
Sbjct: 172 IETANLLLGRRHVVSGRVLKGRGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYW 231

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GV N G  PT       LLE  +FDF  ++YG+   V    +LRPE KF ++++L   
Sbjct: 232 LPGVVNIGTRPTFAEEICPLLEMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVRQ 291

Query: 298 MGEDEKKARK 307
           + +D  + ++
Sbjct: 292 IEQDISRVKQ 301


>gi|312127891|ref|YP_003992765.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777910|gb|ADQ07396.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 300

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 79/310 (25%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +E     P       VA+G FDG H+GH  + E     +      V +F  HP 
Sbjct: 1   MNVYEIVEKRHDSP------AVALGFFDGFHIGHKRLFEVLDANSRGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--YILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  +VSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHVVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + ++ ++GVY +     D   Y 
Sbjct: 172 LANCMLGFHFFISGTVKRGNRLGKKMGFPTINIKFDKEKVVPRKGVY-VTNTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIA 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|330996843|ref|ZP_08320712.1| riboflavin biosynthesis protein RibF [Paraprevotella xylaniphila
           YIT 11841]
 gi|329572286|gb|EGG53945.1| riboflavin biosynthesis protein RibF [Paraprevotella xylaniphila
           YIT 11841]
          Length = 314

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 8/312 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSS 66
           I  + P   +  V  IG FDG+H GH  ++ Q  +  + ++    +++F  HPR ++Q++
Sbjct: 4   ITLTDPLPYQACVATIGFFDGVHRGHRFLIRQLTRYAVGHDLASLLVTFRTHPRQVMQAA 63

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                L+    +   L   G    +   FT   A  SA +F+ ++L E L VK ++ G  
Sbjct: 64  YQPQLLTTYDEKCGQLATTGADYCLTLDFTTALAALSARRFMAEILKEKLSVKVLVIGYD 123

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            RFG DR+       + G + G   V  D +       VSSS +R  L +G V  AA  L
Sbjct: 124 HRFGHDRSEGFAEYVEYGRELGMEVVRAD-VFAMSEVNVSSSMVRACLAEGEVGIAARCL 182

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFR---TQDQTSYSGV 241
              + I   V+HG  +G  LGFPTAN+Q+     ++ K GVYA+  +     ++  + G+
Sbjct: 183 TRPYEITGRVVHGFHVGHELGFPTANIQVEDSQKLIPKNGVYAVWVKGKIGGEEHVWGGM 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PTM       +E  + DF+ ++YG R T+SF   LR E KF++  +L   + ED
Sbjct: 243 LNIGLRPTMENGENRTIEVHLLDFAGDLYGCRLTLSFVRRLRDERKFRNKGELVHQLRED 302

Query: 302 EKKARKILESSY 313
           E   R IL    
Sbjct: 303 EAMVRMILNKEQ 314


>gi|268683528|ref|ZP_06150390.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268623812|gb|EEZ56212.1| riboflavin kinase/FMN adenylyltransferase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 318

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 20  HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFAARTG 79

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 80  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 139

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 140 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 193

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 194 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 252

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 253 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 312

Query: 303 KKAR 306
           + A+
Sbjct: 313 EAAK 316


>gi|260101359|ref|ZP_05751596.1| riboflavin biosynthesis protein RibF [Lactobacillus helveticus DSM
           20075]
 gi|260084811|gb|EEW68931.1| riboflavin biosynthesis protein RibF [Lactobacillus helveticus DSM
           20075]
          Length = 320

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 7/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             ++A+G FDG+HLGH  ++ +A +I      P+ VL+F+ HP+ I         L    
Sbjct: 23  KTILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLD 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + ++G   L    FT + +   A+ F+  V++  L   TV+ G  + +G     +
Sbjct: 83  EKADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVII-KLNADTVVAGFDYTYGPKETAN 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K  +   F  V I + +    + + S+ IR A+ +G +  A  L+G+R+ +   V
Sbjct: 142 MKNLPKFAKGR-FEIVVIPK-QIFNGKKIGSTEIRQAIREGKMDLAFQLMGHRYVMSGTV 199

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG++ G  LGFPTAN+   S  ++ K GVYA + +      Y  + + G N T+     
Sbjct: 200 GHGKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNG-KWYESMTSVGYNVTIGQPEK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           L +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+ + +     
Sbjct: 259 LFIESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQIEIKHYFAQ 314


>gi|319937192|ref|ZP_08011599.1| hypothetical protein HMPREF9488_02434 [Coprobacillus sp. 29_1]
 gi|319807558|gb|EFW04151.1| hypothetical protein HMPREF9488_02434 [Coprobacillus sp. 29_1]
          Length = 311

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 8/298 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           N ++    AIG FDG+H+GH  ++ +  +          +++F+ +P  ++        L
Sbjct: 12  NIVEPICSAIGFFDGLHIGHMALVNEVKRVSEQKGYKKALMTFDHYPLYVLGKIKEEKYL 71

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +  + +  +LEK G   L   KFT E A  S E FI + L++ L VK ++ G  FRFGK 
Sbjct: 72  TSMNDRISLLEKEGLDYLFIVKFTKEVAALSPEDFINQYLID-LHVKHIVCGFDFRFGKY 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            AG+   LQ   +   F+   I E+   K + +SS+ IR  L +G++     LLG ++ +
Sbjct: 131 NAGNTMTLQACQQ---FNVSVIPEVLY-KGEKISSTRIRHVLEQGNIEEMNELLGRKYCV 186

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             +VI G +IG  +GFPTAN+      L   GVY ++     Q  Y G+ N G NPT   
Sbjct: 187 SGEVIKGRRIGHAIGFPTANVDYQSYFLPCHGVYIVKVYVHGQG-YMGMCNIGYNPTFTA 245

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                LE  I DF  +IY Q   V F+  +R E  F   E+L   + ED++K R+  +
Sbjct: 246 LDKPSLEVNILDFDGDIYHQYMIVEFYCLIRKEKPFASKEELIAQLYEDKQKVREYFK 303


>gi|161507678|ref|YP_001577632.1| riboflavin kinase [Lactobacillus helveticus DPC 4571]
 gi|160348667|gb|ABX27341.1| riboflavin kinase [Lactobacillus helveticus DPC 4571]
          Length = 320

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 7/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             ++A+G FDG+HLGH  ++ +A +I      P+ VL+F+ HP+ I         L    
Sbjct: 23  KTILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLD 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + ++G   L    FT + +   A+ F+  V++  L   TV+ G  + +G     +
Sbjct: 83  EKADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVII-KLNADTVVAGFDYTYGPKETAN 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K  +   F  V I + +    + + S+ IR A+ +G +  A  L+G+ + +   V
Sbjct: 142 MKNLPKFAKGR-FEIVVIPK-QIFNGKKIGSTEIRQAIREGKMDLAFQLMGHHYVMSGTV 199

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG++ G  LGFPTAN+   S  ++ K GVYA + +      Y  + + G N T+     
Sbjct: 200 GHGKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNG-KWYESMTSVGYNVTIGQPEK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+ + +     
Sbjct: 259 IFIESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQIEIKHYFAQ 314


>gi|326692680|ref|ZP_08229685.1| riboflavin biosynthesis protein RibF [Leuconostoc argentinum KCTC
           3773]
          Length = 306

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIF-TLSP 74
           +  VV +G FDG+HLGH  +++ A   A+    P+ VL+++PHP  + ++ +     L+P
Sbjct: 8   QPQVVTMGFFDGVHLGHQAVIQAAKAEADRLGVPLAVLTYDPHPVVVFKTLTHPLHYLTP 67

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  + E++G   +   +FT + A  + +QF+ +VL+  L+  TV+ G    +G DR 
Sbjct: 68  LDQKVALFEELGVDRVYVMRFTSQLAQLAPQQFVDEVLLP-LQPTTVVAGFDHLYGGDRQ 126

Query: 135 -GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             +  +L +      F  + +       +Q V SS IR AL  G +    H LG  +   
Sbjct: 127 TANMQVLDQYAANR-FDVITVPPF-EEANQKVGSSAIRRALDAGDMQTVNHQLGRVYQTT 184

Query: 194 SDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HGE  GR LGFPTAN+Q    + L   GVY +  +   Q  Y G+A+ GRN T   
Sbjct: 185 GTVVHGEARGRELGFPTANIQTPELEWLPGIGVYVVGIQIAGQ-WYQGMASIGRNITFGD 243

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             P+ +E  I DF Q+IYG+  TV+++ YLR E+KF  +  L   +  DE+  R+  ++
Sbjct: 244 MRPITVEINILDFKQQIYGEAVTVAWYYYLRGEVKFTSVPDLITQLQHDEQATRQYFKA 302


>gi|150390431|ref|YP_001320480.1| riboflavin biosynthesis protein RibF [Alkaliphilus metalliredigens
           QYMF]
 gi|149950293|gb|ABR48821.1| riboflavin biosynthesis protein RibF [Alkaliphilus metalliredigens
           QYMF]
          Length = 307

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 105/312 (33%), Positives = 166/312 (53%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   ++ N+   N  +G  +A+GNFDGIHLGH  ++   IK         TV +F  H
Sbjct: 1   MKII--MKYNEVDQNIERG--IALGNFDGIHLGHQRLINTLIKECKEQSLEATVYTFINH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T+I        +S  S+++K+ + +G   L   +F  E  + S E F++++L++ L  
Sbjct: 57  PATVISGREMPPQISNLSMKKKVFQSLGLDTLFLDEFNKEIMSLSPEAFVEEILIKKLNC 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  + G  +RFG    GD  +L++ G  +GF  + I+ +  +  + +SSSNIR  +  G 
Sbjct: 117 KIAVVGFDYRFGYKAQGDVTLLKRLGHLHGFQVIEINPVTLDD-EKISSSNIREFIADGK 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           +  A   LG  ++I S+VIHG+  G  LG+PTAN+ + P  ++ KEGVYA      D + 
Sbjct: 176 MNEATKFLGREYSIISEVIHGKGRGIHLGYPTANLLVHPSHLVPKEGVYATLVEI-DGSV 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G    G NPT   N  + +E+FI D+   IYG+   V F  Y+R +IKF+  E L   
Sbjct: 235 YKGATCVGTNPTFGKNS-ISIETFIIDYVGSIYGKEIEVRFVKYVRDQIKFEKTEDLTNQ 293

Query: 298 MGEDEKKARKIL 309
           M  D + ++  L
Sbjct: 294 MKLDIETSKIYL 305


>gi|255976034|ref|ZP_05426620.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T2]
 gi|307279111|ref|ZP_07560169.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0860]
 gi|255968906|gb|EET99528.1| riboflavin kinase/FAD synthetase [Enterococcus faecalis T2]
 gi|306504236|gb|EFM73448.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX0860]
          Length = 316

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   + L + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +   LR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHCLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|328465721|gb|EGF36925.1| riboflavin kinase [Lactobacillus helveticus MTCC 5463]
          Length = 320

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 7/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             ++A+G FDG+HLGH  ++ +A +I      P+ VL+F+ HP+ I         L    
Sbjct: 23  KTILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLD 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + ++G   L    FT + +   A+ F+  V++  L   TV+ G  + +G     +
Sbjct: 83  EKADKMAELGVDYLAVMPFTKKFSEIDAQSFVDNVII-KLNADTVVAGFDYTYGPKETAN 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K  +   F  V I + +    + + S+ IR A+ +G +  A  L+G+R+ +   V
Sbjct: 142 MKNLPKFAKGR-FEIVVIPK-QIFNGKKIGSTEIRQAIREGKMDLAFQLMGHRYVMSGTV 199

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG++ G  LGFPTAN+   S  ++ K GVYA + +      Y  + + G N T+     
Sbjct: 200 GHGKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNG-KWYESMTSVGYNVTIGQPEK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           L +ES IFDF ++IYGQ   + ++ Y R EIKF  +++LK  + +D+ + +     
Sbjct: 259 LFIESHIFDFKEDIYGQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQIEIKHYFAQ 314


>gi|240015825|ref|ZP_04722365.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae FA6140]
          Length = 306

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++      A   P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADARGLPVVAVVFEPQPKEFFALRTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   + ++LE  G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRHFSEISAQAFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVGGGRFQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|332880978|ref|ZP_08448648.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332681152|gb|EGJ54079.1| riboflavin biosynthesis protein RibF [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 314

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 8/312 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSS 66
           I  + P   +  V  IG FDG+H GH  ++ Q  +    ++    +++F  HPR ++Q++
Sbjct: 4   ITLTDPLPYQACVATIGFFDGVHRGHRFLIRQLTRYAAGHDLASLLITFRTHPRQVMQAA 63

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                L+    + + L   G    +   FT   A  SA +F+ ++L E L VK +I G  
Sbjct: 64  YQPQLLTTYDEKCEQLTTTGADYCLTLDFTTALAALSARRFMVEILKEKLSVKVLIIGYD 123

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            RFG DR+       + G + G   V  D    ++   VSSS +R  L +G V  AA  L
Sbjct: 124 HRFGHDRSEGFAEYVEYGRELGMEVVRADAFAMSE-VNVSSSMVRACLAEGEVGMAARCL 182

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRF---RTQDQTSYSGV 241
              + I   V+HG  +G  LGFPTAN+Q+     ++ K GVYA+        ++  + G+
Sbjct: 183 TRPYEITGRVVHGFHVGHELGFPTANIQVEDAQKLIPKNGVYAVWVKGGTGGEEHVWGGM 242

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N G  PTM       +E  + DF+ ++YG   T+SF   LR E KF++   L   + ED
Sbjct: 243 LNIGLRPTMENGENRTIEVHLLDFAGDLYGCCLTLSFVRRLRDEKKFRNKGDLVHQLRED 302

Query: 302 EKKARKILESSY 313
           E   R IL    
Sbjct: 303 EAMVRMILNKEQ 314


>gi|331269624|ref|YP_004396116.1| riboflavin biosynthesis protein RibF [Clostridium botulinum
           BKT015925]
 gi|329126174|gb|AEB76119.1| riboflavin biosynthesis protein RibF [Clostridium botulinum
           BKT015925]
          Length = 305

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 7/291 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   +A+G+FDG+H+GH  ++ + I++A   N+   V +F  HP T+I +      +   
Sbjct: 14  EKTYIALGSFDGLHIGHMSLINKTIELAKKNNAKSMVFTFKNHPLTVINNDIAPKLIINN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K+LEK G   +    F       S E FI+ + +    VK +I G  +RFG    G
Sbjct: 74  ETKTKLLEKAGIDIVNYANFDDIFMKISPEDFIENM-LTHYNVKGIIVGFNYRFGYKNLG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +LQK   K GF    I+ +R N  +IVSS+ IR  +++G ++ A   L   F ++  
Sbjct: 133 DIDLLQKLSCKLGFELNIINPVRINN-EIVSSTRIRQLISEGDIVKANTFLNRPFMLKGK 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+++GR + FPT N+      +L + GVY    +  +   Y G+ N G NPT+  + 
Sbjct: 192 VMHGKQLGRKMNFPTTNLDYDKKFVLPRGGVYYTSVKYNN-KKYKGITNIGYNPTV-KDE 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E+ I DF +EIY +   V F++ +R E KF  IE+L   + +D++ A
Sbjct: 250 KLSIETHILDFKKEIYDEILEVYFYERIRDEKKFDSIEELANQLTKDKEYA 300


>gi|269797851|ref|YP_003311751.1| riboflavin biosynthesis protein RibF [Veillonella parvula DSM 2008]
 gi|269094480|gb|ACZ24471.1| riboflavin biosynthesis protein RibF [Veillonella parvula DSM 2008]
          Length = 310

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   H+ +  + + +     V A+G FDGIH GH  ++ +A++ A   N    +++F  H
Sbjct: 1   MKQIHSFDELRQIKDTK---VYALGTFDGIHRGHQRVIRKAVEEATSINGVSIIITFEHH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI+        +    I + +LE++    ++R   T      +A++F+  +  + + V
Sbjct: 58  PLTILHPERVPKRVIQEEIMDTVLEELKVDYILRLPMTEALLKMTADEFLHDLCND-MNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FG    G+   ++K         +    L  + +S  +SS+ IR A+ +G
Sbjct: 117 EAIVIGENFTFGAKGLGNPEYMKKVVADKNIRVLVQPLLPCDGRSTPISSTEIRKAIHEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            + +A H LG  F  +  VI G++ GRTLGFPT N+ L  ++    +GVYA R       
Sbjct: 177 RLEDANHWLGRPFQFKGTVIKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRVCIGG-I 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N     E  +F+F Q+IYG+   V F  Y+R E+KF +++ L  
Sbjct: 236 WYDGVGNIGDNPTFR-NQYHRCEVHVFNFDQDIYGKEVIVQFISYIRGEVKFNNLQDLID 294

Query: 297 YMGEDEKKARKILESS 312
            M  DE++A  IL ++
Sbjct: 295 QMKVDEEQALAILANA 310


>gi|46198467|ref|YP_004134.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB27]
 gi|46196089|gb|AAS80507.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB27]
          Length = 294

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 15/294 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
              VVA+G+FDG+HLGH  +L QA+  A   + P+ V +F+P  +   +       L   
Sbjct: 12  GPKVVAVGSFDGVHLGHQYLLRQALAEAKALHQPLLVYTFDPPTKVFTRGEG---FLMDL 68

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + + L  +G   ++   F    A   AE+F++ +    L    +  G  FRFG+ R G
Sbjct: 69  TEKVEALRALGVELILAVPFNETFARRPAEEFLEDL--RTLGASRIYVGEDFRFGRGRGG 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L +           +  L     + V SS IR  L +G V  A HLLG  +     
Sbjct: 127 DPEALAR------VAPTRVVPLLALGGEPVKSSRIRALLQEGRVEEARHLLGRPYGAYGV 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ GEK+GR L FPTAN+ + P  +L  GVYA+     D   Y GVAN G  PT+   G 
Sbjct: 181 VVEGEKLGRRLSFPTANLAVHPLKVLPPGVYAVEAMG-DFGRYKGVANVGTRPTL-GGGE 238

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  +  F+ E+YG+   + F  +LR E +F+ +E LK  + +D   AR   
Sbjct: 239 RRLEVHLLGFAGELYGEEVRLLFLKHLRQERRFESLEALKAQIAQDVAAARAYF 292


>gi|260893504|ref|YP_003239601.1| riboflavin biosynthesis protein RibF [Ammonifex degensii KC4]
 gi|260865645|gb|ACX52751.1| riboflavin biosynthesis protein RibF [Ammonifex degensii KC4]
          Length = 319

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 160/314 (50%), Gaps = 8/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  +    +     L    V +GNFDG+HLGH  ++E+ +  A        VL+F PH
Sbjct: 1   MEIVRDWHRAKERFPFLG---VGLGNFDGVHLGHRKLIERLVAWAAATGGIPAVLTFEPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        L    ++++ L ++G   L    FT E A+   E+F+ +VLV+ + V
Sbjct: 58  PAMVLNPQKAPPLLLSSELKKRFLAELGVKVLFILPFTREFASLQPEEFVAEVLVKEMGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G    FG+   G+  +L   GE+YGF    I ++  N    VSS+ IR  L KG 
Sbjct: 118 KAVFVGYNHTFGRGGKGNPALLASLGERYGFKVEVIPQVVVN-GLPVSSTLIRHLLEKGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTS 237
           V  A   LGY       V+ G+  GR LGFPTAN++L   ILL   GVY +R R  ++  
Sbjct: 177 VEEARRYLGYYPLYMGTVVAGDGRGRALGFPTANLELEKGILLPACGVYLVRARVLERNW 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GVAN G  PT        +E F+FDF  E+YG +  VSF   LR E +F+  E+L   
Sbjct: 237 Y-GVANVGVLPTFGGREQPRVEVFLFDFQGELYGLKMEVSFLRRLREERRFRSPEELVAQ 295

Query: 298 MGEDEKKARKILES 311
           + +D  +AR+++  
Sbjct: 296 IQQDVARAREMIAQ 309


>gi|295696162|ref|YP_003589400.1| riboflavin biosynthesis protein RibF [Bacillus tusciae DSM 2912]
 gi|295411764|gb|ADG06256.1| riboflavin biosynthesis protein RibF [Bacillus tusciae DSM 2912]
          Length = 315

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQ-SSSPIFTLSPP 75
             V+A+G FDG+H+GH  IL Q  A       P  V   +PHPR ++   +     L+P 
Sbjct: 17  PSVMALGTFDGLHIGHQEILSQGKAEAKRRGVPFAVFLCDPHPRQVLGIGAEYDVLLTPL 76

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++LE  G   +    FT E A  + EQF+  +L+  L  + ++ G  + FG    G
Sbjct: 77  PEKLRLLEHYGADLVYILLFTREVAAVAPEQFVLDLLLP-LAPEVLVAGFDYTFGAGGKG 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+  GE        +  + N   + VSSS IR  L  G V     LLG  + +   
Sbjct: 136 DAALLKAMGETRALPVFILPPV-NLYGEKVSSSLIREKLRYGEVKLVRELLGRPYALTGR 194

Query: 196 VIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ GE  G  +GFPTAN+QL  P ++   GVY +R          G+ N G  PT    G
Sbjct: 195 VVKGEGRGIGIGFPTANLQLNDPFLIPGTGVYLVRAFW-GMEKGPGLMNIGVRPTFHDRG 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            L LE  + D   ++YG+   V F DYLRPE +F  +++L   + +D + AR +  ++ 
Sbjct: 254 TLSLEVHLLDHRVDLYGEEMRVEFLDYLRPEQRFNSVDRLVAQIEQDVRTARDLWRTAQ 312


>gi|154489994|ref|ZP_02030255.1| hypothetical protein PARMER_00223 [Parabacteroides merdae ATCC
           43184]
 gi|154089436|gb|EDN88480.1| hypothetical protein PARMER_00223 [Parabacteroides merdae ATCC
           43184]
          Length = 308

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 99/298 (33%), Positives = 150/298 (50%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V  IG FDG+HLGH  ++ +  ++A     P  V++F  HPR ++ +      L+  
Sbjct: 13  KRQVATIGFFDGVHLGHRFLIHELKQVAEAAGLPSAVITFPEHPRAVLHADYQPKLLNSF 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K L   G    I   FTLE +  +A++FI  VL + L V T++ G   RFG +R  
Sbjct: 73  EEKLKHLASTGIDYCIVLDFTLELSRLTAKEFITTVLADRLHVDTLLIGYDHRFGHNRED 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                   GE  G   +   +    ++  VSSS IR  L +  V  AAHLL Y + +   
Sbjct: 133 GFEQYVTYGETCGIRVIKASQYSEGEA-AVSSSEIRKLLAECRVEEAAHLLTYPYGLRGS 191

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           ++ G K+GR LGFPTAN+Q+     I+   GVYA+R     Q  Y G+   G  PT+   
Sbjct: 192 IVSGYKVGRKLGFPTANIQVDEPFKIIPGIGVYAVRVYLNGQ-RYKGMLYIGNRPTLDNG 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             + LE  I +FS +IY    TV+F  ++R +IKF  +++L   + +D +   +IL  
Sbjct: 251 DNITLEVNILNFSGDIYNNEITVTFIQHVRGDIKFDTLDQLIDQLKKDRETVDRILTE 308


>gi|78189420|ref|YP_379758.1| riboflavin kinase / FAD synthetase [Chlorobium chlorochromatii
           CaD3]
 gi|78171619|gb|ABB28715.1| FMN adenylyltransferase [Chlorobium chlorochromatii CaD3]
          Length = 320

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSS--SPIFTLS 73
           +  VV +G++DG+H GH +IL + +++   NN    V++F PHPRT+++ +   P+  L+
Sbjct: 25  QPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSVVVTFEPHPRTVLKGALTGPLGLLT 84

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +L       L   +FT + A  +++ FI+ VLV  L  + +I G    FG+DR
Sbjct: 85  TLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIRNVLVGLLGAERIIVGYDHAFGRDR 144

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +G    L++ G +  F    IDE+    ++ +SS+ IR  L  G +      LG  + I 
Sbjct: 145 SGSHNTLERLGNELHFGVEVIDEVLI-GNEHLSSTRIRKLLQDGRIEEVNEFLGSPYLIT 203

Query: 194 SDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+ G ++GRT+GFPT N+Q  P  +L + GVY  R   Q    Y  + N G+ PT+  
Sbjct: 204 GWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFARTMVQG-VPYMALMNIGKRPTVSS 262

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           NG   +E+ +  F   +YG+    S   ++R E +F  +E L+  + +D+K     LE
Sbjct: 263 NGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFASLEALQEQLEKDKKAVEMYLE 320


>gi|294848268|ref|ZP_06789015.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9754]
 gi|294825068|gb|EFG41490.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus A9754]
          Length = 323

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 168/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++   
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-N 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+   + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNKTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R TV++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVTVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|294055322|ref|YP_003548980.1| riboflavin biosynthesis protein RibF [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614655|gb|ADE54810.1| riboflavin biosynthesis protein RibF [Coraliomargarita akajimensis
           DSM 45221]
          Length = 315

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/312 (29%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   +     L        +AIG FDG+HLGH  ++E A+      N    VL+F+PH
Sbjct: 1   MELPLTVSSFSELSGLSGPLHLAIGMFDGVHLGHKAVIESAVFSAQRANGVSAVLTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +   P   + P   + ++L ++G   +IR +F+ + A   A+ F+ ++      +
Sbjct: 61  PSVLFRPQDPTRLIMPIEEKCQMLHRVGVDVVIRKEFSFDYAAIPADDFLARLKEALPAL 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  FRFG  R+GD   L + G   G        ++ N  + +SS+ IR  L  G 
Sbjct: 121 AAVYVGENFRFGAKRSGDVATLIETGRLIGLDVYSAPRIKYN-GEPISSTRIRGDLESGR 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT--QDQT 236
           + +   LLGY +  + +V+ G ++GRT+GFPT N+   P      GVY +R +       
Sbjct: 180 IESVNELLGYNYFADGEVVRGAQLGRTIGFPTLNLPWEPACRPAFGVYFVRLKLKQAGSP 239

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GVAN+G  PT+  +    LE  + + +    G    V +  ++RPE KF  ++ LK 
Sbjct: 240 WAYGVANYGVKPTVAESELPALEIHMLEDTALDAGATVEVEWLKFIRPEQKFDSLDALKE 299

Query: 297 YMGEDEKKARKI 308
            +G D + ARK+
Sbjct: 300 QIGRDTETARKL 311


>gi|298694564|gb|ADI97786.1| bifunctional protein including riboflavin kinase and FAD synthase
           [Staphylococcus aureus subsp. aureus ED133]
          Length = 323

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           + V H I+  Q +   +    +A G FDG+H GH  + +    I  A +    V++F+PH
Sbjct: 4   IEVTHPIQSKQYITEDV---AMAFGFFDGMHKGHDKVFDILNEIAEARSLKKAVMTFDPH 60

Query: 59  PRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  ++         L+P S + + + +      I   F+   AN S E F++  +++  +
Sbjct: 61  PSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRFANVSVEDFVENYIIKN-K 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK VI G  F FGK   G+  +LQ+      F+T  + + +  +++ +S+++IR  L  G
Sbjct: 120 VKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNTTIVSK-QEIENEKISTTSIRQDLING 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQ-DQ 235
            +  A   LGY ++I+  V+ GEK GRT+GFPTAN+Q     +L ++GVYA+      + 
Sbjct: 176 ELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYLLPRKGVYAVSIEIGTEN 235

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y GVAN G  PT        +++E  IFDF   IYG+R  V++  +LRPEIKF  I+ 
Sbjct: 236 KLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERVNVNWHHFLRPEIKFDGIDP 295

Query: 294 LKIYMGEDEKKARKILESSY 313
           L   M +D+ +A+ +L   +
Sbjct: 296 LVKQMNDDKSRAKYLLAVDF 315


>gi|269926023|ref|YP_003322646.1| riboflavin biosynthesis protein RibF [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789683|gb|ACZ41824.1| riboflavin biosynthesis protein RibF [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 324

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 1   MH-VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNP 57
           MH    ++   +         V+ +G FDG+HLGH  I+++  A+   +    T ++F+P
Sbjct: 1   MHRYISSLIHERPYREAPGPQVITMGTFDGLHLGHQAIIKKTLAVAEEHGLESTAITFHP 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR ++  +     L P   +  +L  MG + +    F LE A  SA++F + +  +W+ 
Sbjct: 61  HPRYVLSGNKVPQLL-PLEDRLDLLADMGINHVWCINFDLELAKLSAKEFFELLS-KWVV 118

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TK 176
              ++ G  FR G++R      L   G++ G+  + +  L  +  Q VSS+ IR  L  +
Sbjct: 119 PAALVVGENFRTGRNREAGVKELDVLGQELGWELISVPTLYIH-GQPVSSTRIRHLLTQE 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G V +AA LLG  + I+  V+HGE  GR LG+PTAN+ +S D+++   G+Y       + 
Sbjct: 178 GDVESAASLLGRNYYIKGTVVHGEGRGRQLGYPTANLSVSSDLVVPYNGIYYCDAYLDEP 237

Query: 236 TSYSGVA--NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           ++   VA  + G  PT    G   +E+++ D+  ++Y +   + F   +R E+KF  +E 
Sbjct: 238 STQPKVAAVSIGTRPTF-GGGERTIEAYLLDWYGDLYDRTLKLEFIHRIRDELKFASVED 296

Query: 294 LKIYMGEDEKKARKI 308
           L   M  D    R +
Sbjct: 297 LIDQMDRDVANIRSL 311


>gi|28493548|ref|NP_787709.1| FMN adenylyltransferase [Tropheryma whipplei str. Twist]
 gi|28476590|gb|AAO44678.1| riboflavin kinase [Tropheryma whipplei str. Twist]
          Length = 312

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHP 59
           M VF + +         K   + IG FDG+HLGH  +LE+ + + N      V++F+  P
Sbjct: 1   MRVFRSFDCL----GRDKRTALTIGKFDGVHLGHRRLLERIVALQNQDTSALVVTFDRDP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +T  +       L     +  +LE       +  +F  E A+ SAE F+ KVL+E L + 
Sbjct: 57  KTFFKKDMSFAPLCSLEQKLSLLENCNIPNCLILRFDDELASMSAEDFVHKVLLEKLNMS 116

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +++ G  FRFG    GD  +L+K   + GF+   I +++      +SS+ IR  L+ G V
Sbjct: 117 SIVIGDGFRFGARGLGDAMLLEKLARELGFYLEVIPKIQ-FGKTNISSTLIRKFLSLGQV 175

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            NA+  LG        V+HG+K GR LGFPTAN+       +  +GVY  R       SY
Sbjct: 176 GNASSCLGRNHVCTGTVVHGKKRGRELGFPTANLGKDVSGFIPADGVYIGR--IISDRSY 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ---EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               + GRNPT        +E+          ++YG+R  V F  +LR  + +K I+ LK
Sbjct: 234 PAAVSIGRNPTFGDLEFSQIEAHALYEDISSLDLYGRRIDVEFIAHLRDTMLYKSIDSLK 293

Query: 296 IYMGEDEKKARKILESS 312
             +  D ++ ++   ++
Sbjct: 294 AAIRSDVERCKEYFSTT 310


>gi|323705396|ref|ZP_08116971.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535298|gb|EGB25074.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 310

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 6/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+GNFDGIHLGH  +++++++++       +V +F  H    I        L+    +
Sbjct: 17  VIALGNFDGIHLGHQELIKKSVELSKTNKMTSSVFTFKQHTTKTIYKYDYQKLLTTNRKK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +   K      I Y F  + +  S + FI+ +L++ L +K  + G  +RFG +  GD  
Sbjct: 77  IEEFSKFNLDYAIIYDFNKDFSLLSPKTFIESILIDKLNMKIAVVGDNYRFGYNANGDVS 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K  + Y +    ++ ++ N    +SSS IR+ + +G+V  A+  LG  F++E  VI 
Sbjct: 137 LLKKFSKIYNYEVYIVEPIKLND-IPISSSFIRSLIQEGNVEEASKCLGRYFSLEGYVIS 195

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G KIGR LGFPTAN+++    IL   GVY  + +      + G+ N G NPT   N  L 
Sbjct: 196 GRKIGRNLGFPTANIKIDMDYILPLNGVYITKVKI-GNRHFLGITNVGINPTFNVNN-LS 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +E++I DF++ IYG    + F   +R EIKF   ++L   M  D   A+  
Sbjct: 254 VETYIIDFNENIYGLFIEIEFIKRIRDEIKFNSKKELIEQMKNDYALAKSY 304


>gi|158320564|ref|YP_001513071.1| riboflavin biosynthesis protein RibF [Alkaliphilus oremlandii
           OhILAs]
 gi|158140763|gb|ABW19075.1| riboflavin biosynthesis protein RibF [Alkaliphilus oremlandii
           OhILAs]
          Length = 307

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 96/292 (32%), Positives = 152/292 (52%), Gaps = 6/292 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+GNFDG+H+GH  ++   I+     N    V +F  HP +II   +    ++   +++
Sbjct: 18  VALGNFDGVHIGHQKLISTLIRECKEKNLESCVYTFGNHPLSIITEKNEHPQITNMDMKK 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++LE +    L    F  E  + + E F++ +LV+ L  K V+ G  + FG    G+  +
Sbjct: 78  RLLESLEVELLYLENFNKEFMSLTPEGFVKDILVDRLNCKIVVVGFDYTFGYKAKGNVQV 137

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G KYGF    I  +  +    V S+ IR  +  G+   A   LG  + I S VI+G
Sbjct: 138 LKELGLKYGFTVYEISPVTIDN-IKVGSTIIREYIKDGNFEKANTFLGRPYAIYSMVING 196

Query: 200 EKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           + IG  LG+PTAN+++ P  ++  EGVYA   R      Y G  + G NPT        +
Sbjct: 197 KGIGNKLGYPTANIRIEPSHLVPIEGVYATYIRVNG-KFYKGATSVGTNPTF-GVNQTTV 254

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E+FI DF+++IY +   V F   LR +IKFK+ + L   + ED   A+K L+
Sbjct: 255 ETFILDFNEDIYNECIEVQFIKKLRDQIKFKNTDDLVAQIKEDANNAKKYLQ 306


>gi|78044293|ref|YP_360582.1| riboflavin biosynthesis protein RibF [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996408|gb|ABB15307.1| riboflavin biosynthesis protein RibF [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 307

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 96/310 (30%), Positives = 150/310 (48%), Gaps = 13/310 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M VFH + E   + P      V+A+GNFDG+HLGH  +L     +A        V +F P
Sbjct: 1   MQVFHGSREFTLNCPV-----VLALGNFDGVHLGHQKLLRVTRDLAGKIGACPGVYTFWP 55

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP  ++Q    +  + P   + K          +   FT E A  S  +FI  + +E   
Sbjct: 56  HPLEVLQGKQ-VKYILPLDERLKRFAAEELEFTVLESFTPEYARLSPGEFINML-LENFN 113

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +  V+ G  + FG   AG    L K GE++GF    ++ +     ++VSS+ IR  L  G
Sbjct: 114 LAGVVAGFNYTFGHLGAGRVTDLIKAGERFGFKVEVVEPV-TFGQEVVSSTAIREKLAAG 172

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
            +     +LGY + ++  VI G+K+ R +GFPTAN+    + +L + GVY +      + 
Sbjct: 173 DIAKVNGMLGYTYFLKGKVIGGDKLARKIGFPTANILPEENLVLPQYGVYRVDVEITGEE 232

Query: 237 -SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               G+AN G  PT+      LLE  + ++   +Y +   VSF   +RPE KF  +E+LK
Sbjct: 233 VKIPGIANLGVRPTVKVESRPLLEVHLLNYKANLYHRELKVSFLKKIRPEKKFNSLEELK 292

Query: 296 IYMGEDEKKA 305
             +  D K+A
Sbjct: 293 KQIELDVKEA 302


>gi|320120342|gb|EFE28417.2| riboflavin biosynthesis protein RibF [Filifactor alocis ATCC 35896]
          Length = 304

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/300 (33%), Positives = 146/300 (48%), Gaps = 7/300 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  VV IGNFDG+H GH  ++E+ ++I    N    V ++  HP   +     +  L   
Sbjct: 8   EETVVTIGNFDGLHRGHLKLMERTLEISKQKNLKSVVFTYENHPLEYVLK-KKVEKLFTN 66

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             ++  L+++G   ++   F  E    S   FIQ++L++ L  K ++ G    FGK R G
Sbjct: 67  RERDAKLKELGIDTILSVPFDEEIMGMSTNDFIQEILIDKLHTKYLVLGEDAHFGKGREG 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               +Q  G + G     I  L       +SSS IR  + KG V  A   LG  F I  +
Sbjct: 127 SAECIQSVGSQLGLTVEII-PLFFEDGVRISSSYIRQLIKKGKVDVAKEYLGRMFAITGE 185

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PN 253
           VIHG++ GR LGFPTAN+      +L   GVY           Y G  + G NPT+   N
Sbjct: 186 VIHGKENGRKLGFPTANISYDEHTVLPALGVYNTIVEYHG-KHYIGATSVGYNPTISLLN 244

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
             + LE  I DF +EIYG+  TV F   +R E+KF  +E+LK  + +DE   RK  +  Y
Sbjct: 245 NRISLEVHILDFEKEIYGEEITVRFISKIRDEMKFNSLEELKNQISKDEILIRKQHDEKY 304


>gi|227892595|ref|ZP_04010400.1| FAD synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865580|gb|EEJ73001.1| FAD synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 313

 Score =  288 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 81/316 (25%), Positives = 158/316 (50%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M + H   +   +  ++     V+A+G FDG+HLGH  ++ +A +I    N P+ V++F+
Sbjct: 1   MKIVH---LTYPVKENILSSKIVLALGFFDGVHLGHQRLVRRAKEIAEQKNLPLVVMTFD 57

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP+ I +       L     +   + ++G   L    FT + ++  A+ F+  V+V  L
Sbjct: 58  RHPKEIYEDKKNFKYLETLEEKADKMTELGVDYLAVMPFTKKFSSIGAQDFVDNVIV-KL 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              TV+ G  + +G     +   L    +  G   + +   +  + + + S+ IR A+  
Sbjct: 117 NADTVVAGFDYTYGPKEIANMEHLPDFAK--GRFDIVMMPKQIFEGKKIGSTEIRQAIKD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ 235
           G +  A  L+G+ + +   + HG++ G  LGFPTAN+  +   ++ K GVYA +    D 
Sbjct: 175 GKMELAYELMGHHYVMSGTIGHGKRNGHKLGFPTANLIWAEHKVIPKIGVYATKTEI-DG 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G N T+     + +ES +FDF+Q++YG+   + ++ Y R E+KF  +++LK
Sbjct: 234 KWYESMTSVGYNVTIGQPDKIYIESNLFDFNQDVYGKPMKIKWYKYTRGEVKFDSLDELK 293

Query: 296 IYMGEDEKKARKILES 311
             + +D+ + +   + 
Sbjct: 294 DQLMKDKTEIKAYFDQ 309


>gi|240124948|ref|ZP_04737834.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Neisseria
           gonorrhoeae SK-92-679]
          Length = 306

 Score =  288 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQ---S 65
            + P+   G  V IGNFDG+HLGH  IL++          P+  + F P P+        
Sbjct: 8   HNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADTRGLPVVAVVFEPQPKEFFAARTG 67

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +P   +SP   +  +LEK G   A    +F    +  SA+ FI ++L + L  + ++ G
Sbjct: 68  KTPPCRISPLRTKLGLLEKTGCVDAAWVLRFDRHFSEISAQGFIDRLLRQTLNTRYLLVG 127

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
             FRFG  R G   +L ++ +     T  V ++++R       SS+ +R AL+ G++  A
Sbjct: 128 DDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRT------SSTAVRQALSDGNLAYA 181

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
             LLG+ + +   V+HG K+GRTL  PTAN++L        GV+ +       T   GVA
Sbjct: 182 KKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHRYALGGVFVVEADGAFGTR-RGVA 240

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +FG NPT+       LE  +FDF  ++YGQR  V F   LR E KF  +E+LK  +  D 
Sbjct: 241 SFGFNPTVDGGCSQKLEVHLFDFQGDLYGQRLNVRFLHKLRDEEKFDGMEELKRRIEADM 300

Query: 303 KKAR 306
           + A+
Sbjct: 301 EAAK 304


>gi|260438336|ref|ZP_05792152.1| riboflavin biosynthesis protein RibF [Butyrivibrio crossotus DSM
           2876]
 gi|292808923|gb|EFF68128.1| riboflavin biosynthesis protein RibF [Butyrivibrio crossotus DSM
           2876]
          Length = 299

 Score =  288 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 9/292 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPP 75
           +  VV  G FDGIH GH L++E+A++I +   I V+  +FN        ++ P   ++ P
Sbjct: 13  ENTVVTFGKFDGIHNGHRLLIEKAVRIGHEQGIKVVLCTFNMDNW----NAKPQKAITTP 68

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  I EK G   L  Y F  E A    E+F++  L E L  K V+ G  +RFGK+R+G
Sbjct: 69  DERAYICEKYGIDVLYEYPFDNEIAGMLPEEFLKYFLKEKLNAKFVVIGADWRFGKNRSG 128

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+   +KY + +  I++   N ++ +SS+ IR  + K  +     LLGY +  +  
Sbjct: 129 DAALLKAYEDKYCYSSYVIEKETYNNTE-ISSTWIRNEIEKSDLSTVKKLLGYDYFFKGK 187

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+++GRT+GFPT N+  SP+ +L E GVY       D   Y GV N G  PT+    
Sbjct: 188 VVHGKQLGRTIGFPTLNLIPSPNKILPEYGVYESE-VVIDNHMYKGVTNIGIRPTIDDGT 246

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            + +E+F+ DF +++Y     +    ++RPE KF  +  LK  +  D    R
Sbjct: 247 YVTVETFVLDFDEDVYDSDVIIRLKKFIRPEQKFDSVNGLKKQLEADIAFVR 298


>gi|262340860|ref|YP_003283715.1| bifunctional riboflavin kinase/FAD synthetase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272197|gb|ACY40105.1| bifunctional riboflavin kinase/FAD synthetase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 312

 Score =  288 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 170/313 (54%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHP 59
           M ++  I+   SL       ++ IG FDG+H+GH  I++  I          +++F+PHP
Sbjct: 1   MKIYSFIDEFSSL----FPCILTIGIFDGVHMGHKKIIQNLILSAEKKYCPVLITFHPHP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           + I+      F L+  S +   L+K+G   LI + F++  +  S ++F+ K+L     +K
Sbjct: 57  KEILNPGKKFFYLNTISERIYNLKKIGIEHLIVHPFSINFSKLSTKKFLNKILHSQFRIK 116

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +ITG     GK+R G    L+K    YGF    ++  + NK +IVSS++IR +L  G++
Sbjct: 117 QIITGHDSHIGKNRDGSYEELKKLSHIYGFKLYQVEAYKLNK-RIVSSTDIRKSLLLGNI 175

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSY 238
             A   LGY +T+  +VI G+ IG+T+ FPTAN+Q+    L  K GVYA++    D   Y
Sbjct: 176 QWANQALGYLYTLSGNVIKGKGIGKTIQFPTANLQIDSKKLIPKNGVYAVKINYLDNI-Y 234

Query: 239 SGVANFGRNPTMV-PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            G+ N G NPT+   N  + +E  IF+F + IYG++  +S    +R E KF  +++LK  
Sbjct: 235 QGMLNIGFNPTIDQQNQKINVEVHIFNFFENIYGKKIEISIIHMIREEKKFNTLQELKKQ 294

Query: 298 MGEDEKKARKILE 310
           + +DE   +K   
Sbjct: 295 IEKDEINIKKFFS 307


>gi|256371444|ref|YP_003109268.1| riboflavin biosynthesis protein RibF [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008028|gb|ACU53595.1| riboflavin biosynthesis protein RibF [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 314

 Score =  288 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 96/310 (30%), Positives = 147/310 (47%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M V   ++    +   +   VV IG FDG+HLGH  ++  A  +A     P+ V+SF+ H
Sbjct: 1   MIVVRELDDPAFV---VPSSVVTIGTFDGLHLGHQRLIRVARDVARRARLPLVVVSFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        +  P  ++++L   G   L    F  E A  +   F  +VL   L  
Sbjct: 58  PLRLLAPERVPPLIMTPLQRDRVLASQGVGVLYLLHFGPERAQQAPASFAAEVLASRLGA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  F FG   AG    L   G   GF    ++EL ++  ++VSSS IR  +  G 
Sbjct: 118 THVVVGANFTFGARGAGRPADLVAMGRDLGFSVD-VEELVDDDGEVVSSSRIRATVASGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           ++ A+ LLG  + +E  V+ G+  GR LGFPTAN+ +S       +GVYA      D   
Sbjct: 177 LVEASRLLGRAYAVEGVVVAGDGRGRELGFPTANVVVSSSYASPPDGVYAGWA-WNDSGR 235

Query: 238 YSGVANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           ++   + G  PT  P +G  LLE  + D   ++YGQ   V+F   LR ++ F  +E+L  
Sbjct: 236 WAAAISLGTRPTFYPTDGLRLLEVHLLDADVDLYGQSLEVAFDSRLRGQVAFAGVEELIA 295

Query: 297 YMGEDEKKAR 306
            M  D  + R
Sbjct: 296 QMHADVAEVR 305


>gi|182414633|ref|YP_001819699.1| riboflavin biosynthesis protein RibF [Opitutus terrae PB90-1]
 gi|177841847|gb|ACB76099.1| riboflavin biosynthesis protein RibF [Opitutus terrae PB90-1]
          Length = 313

 Score =  288 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 156/314 (49%), Gaps = 4/314 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+     +  +      +   +AIG FDG+HLGH  ++E A++ A   N    VL+F+PH
Sbjct: 1   MNAPRQFDALEHAQLASRPVHLAIGIFDGVHLGHAAVIEAAVQSARRSNGQSAVLTFDPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I++ + P   L   S + ++L ++G  A+I   FT+E A   A QF+  +     ++
Sbjct: 61  PSVILRPAEPTRLLMNRSAKARVLGRLGIEAVINQPFTVELAAMEAVQFVPWLKQHVPQL 120

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  +RFG+ R GD  +L   G K G        + +   + +SSS IR A+T G 
Sbjct: 121 AGIYVGENWRFGRGRRGDIALLVNEGRKVGVSVFSAPRV-SLDGEPISSSRIRAAVTAGE 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTS 237
           +  A  +LGY +  E  V+ G K+GRT+GFPT N+  +PD+  + GVY +R   T+    
Sbjct: 180 IAAANAMLGYVYFAEGRVVPGNKLGRTMGFPTLNLAWAPDLQPRFGVYVVRVTGTKSTAP 239

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              VAN+G  PT+       LE  + D      G   TV +  +LRPE+KF  +  L+  
Sbjct: 240 LRAVANYGARPTVEKAAEPRLEVHLLDECPYDAGDEITVEWLHFLRPEMKFGGLGTLRAQ 299

Query: 298 MGEDEKKARKILES 311
           +  D + A      
Sbjct: 300 IAADREAALAFFAK 313


>gi|197121072|ref|YP_002133023.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. K]
 gi|196170921|gb|ACG71894.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter sp. K]
          Length = 323

 Score =  288 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 16/321 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
            VF ++E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PHP
Sbjct: 6   QVFRSLE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRSAGVLTFEPHP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV 
Sbjct: 65  VRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFAARDLAGRLEVA 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+V
Sbjct: 125 DVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGNV 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-- 237
             AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R          
Sbjct: 183 EAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATTG-LLPANGVYVVRAELGGAHRET 241

Query: 238 -------YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
                  + GV N G  PT+      + E+ +F F   ++YG    ++F   LR E +F 
Sbjct: 242 GLSGAAVHGGVCNVGVKPTVESGAAAVAEAHLFGFDGRDLYGTPIRLAFLARLRDEQRFP 301

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            +E L+  +  D + A ++L 
Sbjct: 302 SVEALRAQIARDVEAAHRVLA 322


>gi|309791318|ref|ZP_07685841.1| riboflavin biosynthesis protein RibF [Oscillochloris trichoides
           DG6]
 gi|308226628|gb|EFO80333.1| riboflavin biosynthesis protein RibF [Oscillochloris trichoides
           DG6]
          Length = 287

 Score =  288 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+HLGH  ++  A++ A +      VL++ PHP  I++  +P   LS    + ++
Sbjct: 1   MGKFDGLHLGHRQLISTAVRHARSLGFLSAVLTWEPHPNLILRPGTPPQLLSNLEEKIEL 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +       LI   FT  T   SA+ ++ ++    L ++ +  G  F  G+DR GD   L 
Sbjct: 61  IGSFDPDLLIIAPFTEATKTTSADAYLAQICA-ALPLRELWVGAGFAMGRDREGDVPNLM 119

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
             G++ GF      ++  +  ++VS+S +R  L  GHV  AA LLG  F +   V+ G++
Sbjct: 120 SIGQERGFAVGTASKVEID-GEVVSASRVRELLATGHVERAAMLLGRPFGLRGTVVPGDQ 178

Query: 202 IGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            GR +GFPTAN+++SP  ++  +GVYA R    D  S   V N G  PT        +E+
Sbjct: 179 RGRVIGFPTANLEISPNHVMPADGVYACR-VLLDGMSLPAVTNVGLRPTFGMI-QRTVEA 236

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + D+S +IYG+   ++F   LR E KF  IE L   + +D ++AR++L
Sbjct: 237 HLLDWSGDIYGRTLQITFLHRLRSEQKFAGIEALIAQIRQDAEQARRLL 285


>gi|55980496|ref|YP_143793.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB8]
 gi|55771909|dbj|BAD70350.1| riboflavin kinase/FMN adenylyltransferase [Thermus thermophilus
           HB8]
          Length = 294

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 93/294 (31%), Positives = 142/294 (48%), Gaps = 15/294 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
              VVA+G+FDG+HLGH  +L QA+  A    +P+ V +F+P  +   +       L   
Sbjct: 12  GPKVVAVGSFDGVHLGHQYLLRQALSEAKTLKAPLLVYTFDPPTKVFTRGEG---FLMDL 68

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L ++G   ++   F  E A    E F++ +    L+   +  G  FRFG+ RAG
Sbjct: 69  QEKVEALREVGVELILAVPFNEEFARRPPEAFLEDL--RALQASRIYVGEDFRFGQGRAG 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L++           +  L +   + V SS IR  L +G V  A HLLG  +     
Sbjct: 127 GPEALER------VAPTRVVPLLSLGGEAVKSSRIRALLREGRVEEARHLLGRLYGAYGV 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+++GR LGFPTAN+ + P  +L  GV+A+         Y GVAN G  PT+     
Sbjct: 181 VVEGDRMGRRLGFPTANLAVHPLKVLPPGVFAVEAEGA-FGRYKGVANVGTRPTL-GGEE 238

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             LE  +  F+ E+YG+   V F   LR E +F  +E L+  + ED  +AR   
Sbjct: 239 RRLEVHLLGFAGELYGEEVRVRFLKRLREERRFPSLEALRAQIAEDVAEARAYF 292


>gi|255994868|ref|ZP_05428003.1| riboflavin biosynthesis protein RibF [Eubacterium saphenum ATCC
           49989]
 gi|255993581|gb|EEU03670.1| riboflavin biosynthesis protein RibF [Eubacterium saphenum ATCC
           49989]
          Length = 307

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   VA+GNFDG+H+ H  +++   K A   N    V +F  HP+  I  S  +  ++  
Sbjct: 11  RSRAVALGNFDGVHIAHVKLIDMIKKRARAFNLEACVFTFKNHPKEFIPGSEILKYINDT 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
               +I E +G  +L+   F       S E F++ V+VE L  K V  G  +RFG +  G
Sbjct: 71  EKTMEIFENLGIDSLVMVPFDEVLQRMSPEDFVKDVIVERLGAKYVCVGYDYRFGFEGKG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L + G+ YGFH   ID++ +     VSSS IR  + +G       LLG R+ I   
Sbjct: 131 DVSLLDRLGKTYGFHVDVIDKV-SVGGVTVSSSRIRKLIYEGDFEGVQKLLGRRYMIAGK 189

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-TSYSGVANFGRNPTMVPN 253
           V+HG+ IGR LGF T N+    ++ +  +GVY  R R   +   Y  + N G  PT   +
Sbjct: 190 VVHGKSIGRKLGFRTLNIMPRENLCIPSDGVYVTRTRVAMKSKVYDSITNIGTAPTFKGD 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             + +E+ +FDF+++IYG    + F   +R EIKF   E+L   + ED + A+ I
Sbjct: 250 A-VSIETNVFDFNEDIYGDIVHIDFLKKIRDEIKFDTPEELSKQIAEDVRLAKDI 303


>gi|297621090|ref|YP_003709227.1| putative riboflavin kinase/FMN adenylyltransferase [Waddlia
           chondrophila WSU 86-1044]
 gi|297376391|gb|ADI38221.1| putative riboflavin kinase/FMN adenylyltransferase [Waddlia
           chondrophila WSU 86-1044]
          Length = 318

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 108/322 (33%), Positives = 180/322 (55%), Gaps = 10/322 (3%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR 60
           ++  IE  + L   +   V+ IGNFDG+H GHH ++EQ++  A        VL+F+ HP 
Sbjct: 4   IYQKIEDFKPLDVPV---VLTIGNFDGVHRGHHRVIEQSVSYARLIGGKSVVLTFSNHPS 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++ + +P+  +  P  ++++LEK+    LI+  F+LE +  SAE FIQ +  +++    
Sbjct: 61  EVLPNRTPVLPICTPLHKKQLLEKLSVDFLIQIPFSLEFSKQSAETFIQSIR-KFIPFSH 119

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   RFG +R GD+  +Q++ + +GF T +ID + +     VSSSNIR A+  G+  
Sbjct: 120 LVLGYDARFGNNRQGDQEAIQQQAKIFGFTTDYIDCV-DINGITVSSSNIRIAVKNGNFT 178

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A+ LL   ++I S VI GE+IG  +GFPTAN+ ++   L   GVYA+  +  DQ +  G
Sbjct: 179 EASKLLERPYSILSTVIKGEQIGTQIGFPTANLDVANLCLPPFGVYAVHLKC-DQATLPG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           VAN G  PT+        E F+ D    + G+   +    +LR E+KF  +++LK  + E
Sbjct: 238 VANLGVAPTLKNTRLPTFEVFMLDGILNLLGKTVELIPLHFLRTEVKFSSLKQLKQQISE 297

Query: 301 DEKKARKILESSYPLSERDRII 322
           D K A+   + S    ++D ++
Sbjct: 298 DIKTAKIFFKHSK--KDKDELL 317


>gi|18310664|ref|NP_562598.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           perfringens str. 13]
 gi|168214485|ref|ZP_02640110.1| riboflavin biosynthesis protein RibF [Clostridium perfringens CPE
           str. F4969]
 gi|18145345|dbj|BAB81388.1| riboflavin biosynthesis protein [Clostridium perfringens str. 13]
 gi|170714051|gb|EDT26233.1| riboflavin biosynthesis protein RibF [Clostridium perfringens CPE
           str. F4969]
          Length = 309

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   VA+G+FDGIH GH  ++ ++ +++    S   V +F  HPR  I        L   
Sbjct: 14  KSTYVALGSFDGIHKGHLALINKSNELSRKNDSLSMVYTFKNHPRKFINKEGAPKLLVTL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +ILE +        +F  +      E+FI+ + ++   V+ ++ G  +RFG    G
Sbjct: 74  HEKIRILEDLNVDLSSFVEFDKKFMELEPEEFIENL-IKNYNVRGIVVGFNYRFGHKNKG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K  +  G     I+     KS++VSS+ IR AL++G + +A ++LG  F++  +
Sbjct: 133 DVKLLKKLCDLKGLELYVIEPFTY-KSEVVSSTRIRKALSEGELEDANNMLGRYFSLNGE 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+KIGRT+ FPTAN++ + +I L K GVY           Y G+ + G NPT+    
Sbjct: 192 VVSGKKIGRTINFPTANLKNNDEIILPKIGVYYTNVEVNG-EIYKGITSVGNNPTVN-GK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I +F ++IYG+   + F   +R E KF  +E+LK  + +D+K A +
Sbjct: 250 NTTVETHILNFDEDIYGKHIKLYFISKIRNEKKFNSLEELKEQLIKDKKFAEE 302


>gi|42520600|ref|NP_966515.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|99035945|ref|ZP_01314991.1| hypothetical protein Wendoof_01000176 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|42410339|gb|AAS14449.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 310

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+      P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +     SSS IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTIDGKICSSSS-IREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQD--Q 235
           +  A  LLG  + +   V  G   GR +GFPT N+ +   ++  K G Y  R    D   
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIEDCMIKPKFGTYYARVTFPDSNP 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GV N G  PT       ++E  IFDF +++Y  +  +    ++R E KF  IE+L 
Sbjct: 234 NWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKFHSIEELT 293

Query: 296 IYMGEDEKKARKI 308
             +  D  K  ++
Sbjct: 294 KQINYDILKVYRL 306


>gi|118595222|ref|ZP_01552569.1| riboflavin kinase [Methylophilales bacterium HTCC2181]
 gi|118441000|gb|EAV47627.1| riboflavin kinase [Methylophilales bacterium HTCC2181]
          Length = 300

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 100/299 (33%), Positives = 154/299 (51%), Gaps = 19/299 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M VF +++   S      G ++ IGN+DGIHLGH  IL + I      N   +V++F PH
Sbjct: 1   MKVFRHLKGTHS------GSILTIGNYDGIHLGHQEILNKLILEAKKTNLLSSVMTFEPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+           +     + +  E+     +   KF  E ++ ++ QFI  +L   ++ 
Sbjct: 55  PKEFFFPKDAPARIISIREKLEYFEEKRIDQVFIIKFNHEFSSLTSTQFID-ILKNNIQA 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G  FRFG  R GD   L     K G +   +++++NN  + +SS+ +R  L  G 
Sbjct: 114 KQVIIGNDFRFGARREGDFKSLM----KDGINVCVMEKIQNN-GERISSTMVRDLLANGD 168

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A ++LG  + I   V+HG+K GR LGFPTAN+ +  +    +GV+A++         
Sbjct: 169 LERATYILGRPYAISGKVVHGDKRGRELGFPTANIHMFHNRPPLKGVFAVKLNG-----M 223

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           SGVAN G  PT+     L LE  +FDFS ++YG+   V F   +R E KF++IE LK  
Sbjct: 224 SGVANLGTRPTITGISKLNLEVHLFDFSDDLYGKHAKVIFLQKVRDEKKFRNIEALKEQ 282


>gi|160892790|ref|ZP_02073580.1| hypothetical protein CLOL250_00321 [Clostridium sp. L2-50]
 gi|156865831|gb|EDO59262.1| hypothetical protein CLOL250_00321 [Clostridium sp. L2-50]
          Length = 309

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 92/295 (31%), Positives = 157/295 (53%), Gaps = 4/295 (1%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLS 73
           N  KG VVA+G FDG H GH L+L++ +++  +     V +F+    +I      + ++ 
Sbjct: 13  NTEKGSVVALGKFDGFHQGHKLLLDEVLRLQKDGYTGVVFTFDIRKNSIFDVDK-LQSII 71

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  + E+MG   L+ Y F    A+   E F+  +LV+ L    V+ GT + FGK +
Sbjct: 72  TSEEKCMLAEQMGIDVLVEYPFDDAFASMEPEAFVTDILVKRLHAGYVVVGTDYGFGKKK 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G+  +L+K   ++G+  + I++ + +   IVSS+ IR  +++G +  A   LG  + + 
Sbjct: 132 RGNVELLRKMAGEHGYQVIVIEKKKIHD-VIVSSTYIRMLISEGKMEEAETFLGRPYFLS 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG ++GRT+  PTAN+      I    GVYA R   +D     G+ N G NPT+  
Sbjct: 191 GHVVHGRELGRTIQVPTANLLPKHGKIYPVTGVYASRIHLEDGRVCYGITNIGDNPTVNT 250

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +  + +E+ IFDF ++IY Q+  V    ++R E KF  + +LK  M  D + A++
Sbjct: 251 DRRVTIETHIFDFDEDIYEQKLVVELLSFIRGEQKFSGVSELKAQMLADMEVAKQ 305


>gi|149179494|ref|ZP_01858042.1| probable riboflavin kinase (FAD synthetase) [Planctomyces maris DSM
           8797]
 gi|148841662|gb|EDL56077.1| probable riboflavin kinase (FAD synthetase) [Planctomyces maris DSM
           8797]
          Length = 295

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 5/289 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V+IGNFDG+H GH L++   +        P  V +F+PHP  +++       L     + 
Sbjct: 2   VSIGNFDGVHRGHQLMILTLVQHARTQKIPAIVFTFDPHPIHLLRPEHAPPELMTIEQRA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L+ +G   +I Y       N +AE+F Q+VL + L+ K ++ G  F FGK+RAGD  +
Sbjct: 62  EVLQGLGVDCVIAYPTDRALLNLTAEEFFQQVLCDQLQAKGMVEGPNFYFGKNRAGDVAL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L    E+ G     ++      S+++SSS +R ++  G +  A  +LG  + I   V HG
Sbjct: 122 LGHLCEQAGMFFKVVEPTVC-GSRMISSSEVRKSIQAGEIGEATRMLGRLYQISGTVGHG 180

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            + GR LGFPTAN+     ++  +GVY           Y    + G NPT   +    +E
Sbjct: 181 AERGRMLGFPTANLTDIKTLIPADGVYCGVGEIAG-RQYPAAIHIGGNPTFQSD-ETKVE 238

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             +  FS +IYGQ+  V F D LR    F D E LK  +  D + A+K+
Sbjct: 239 VHLIGFSGDIYGQKLQVQFLDQLRGTQTFADAESLKTQLLIDVESAKKL 287


>gi|28572342|ref|NP_789122.1| riboflavin biosynthesis protein [Tropheryma whipplei TW08/27]
 gi|28410473|emb|CAD66859.1| riboflavin biosynthesis protein RibF [includes: riboflavin kinase]
           [Tropheryma whipplei TW08/27]
          Length = 312

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHP 59
           M VF + +         K   + IG FDG+HLGH  +LE+ + + N      V++F+  P
Sbjct: 1   MRVFRSFDCL----GRDKRTALTIGKFDGVHLGHRRLLERIVALQNQDTSALVVTFDRDP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +T  +       L     +  +LE       +  +F  E A+ SAE F+ KVL+E L + 
Sbjct: 57  KTFFKKDMSFVPLCSLEQKLSLLENCNIPNCLILRFDDEFASMSAEDFVHKVLLEKLNMS 116

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +++ G  FRFG    GD  +L+K   + GF+   I +++      +SS+ IR  L+ G  
Sbjct: 117 SIVIGDGFRFGARGLGDAMLLEKLARELGFYLEVIPKIQ-FGKTNISSTLIRKFLSLGQA 175

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            NA+  LG        V+HG+K GR LGFPTAN+       +  +GVY  R       SY
Sbjct: 176 GNASSCLGRNHVCTGTVVHGKKRGRELGFPTANLGKDVSGFIPADGVYIGR--IISDRSY 233

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ---EIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               + GRNPT        +E+          ++YG+R  V F  +LR  + +K I+ LK
Sbjct: 234 PAAVSIGRNPTFGDLEFSQIEAHALYEDISSLDLYGRRIDVEFIAHLRDTMLYKSIDSLK 293

Query: 296 IYMGEDEKKARKILESS 312
             +  D ++ ++   ++
Sbjct: 294 AAIRSDVERCKEYFSTT 310


>gi|33861829|ref|NP_893390.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33640197|emb|CAE19732.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 307

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 94/294 (31%), Positives = 154/294 (52%), Gaps = 5/294 (1%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +   +AIG+FDG+H GH  ++E  +K  + +P    SF PHPR ++   + +  L  P  
Sbjct: 12  QPTSIAIGSFDGLHAGHRKLIESVVKENDYTPTIA-SFWPHPREVLYKETRL-RLDLPEE 69

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  ILE +G   L+   F    +  SAE+FI+ +L+  L+ K++  G  FRFG  R+GD 
Sbjct: 70  KLPILEDLGIEQLVLIPFDKNLSKLSAEKFIKNILINQLQAKSISVGANFRFGFKRSGDI 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             ++   +        I  +  +K   +SSS IR  L K  + NA  +L   ++ +  V+
Sbjct: 130 NTIKLATKDLDIKLKII-SILEDKGGRISSSRIRDLLQKSDLKNAFKILNRPYSFKGKVV 188

Query: 198 HGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
            G+ IG++LGFPTAN+++     L  EGVYA      +     + V N G  PT+ P  P
Sbjct: 189 KGKGIGKSLGFPTANLEIDGRKFLPGEGVYAAWSTINNSSNKIASVMNLGSQPTIDPLLP 248

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +E  + +    +YG   +V   + LR +IKF++I++L   + +D + A KIL
Sbjct: 249 SAVEVHLINKDINLYGLNLSVEPIEKLRSQIKFQNIDELSNQITKDRENALKIL 302


>gi|291295383|ref|YP_003506781.1| riboflavin biosynthesis protein RibF [Meiothermus ruber DSM 1279]
 gi|290470342|gb|ADD27761.1| riboflavin biosynthesis protein RibF [Meiothermus ruber DSM 1279]
          Length = 295

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 104/305 (34%), Positives = 155/305 (50%), Gaps = 15/305 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQ 64
           + IN          VVAIG+FDG+HLGH  ++ QA + A     P+ V +F+P P  +  
Sbjct: 2   LLINDPSDAPAGPKVVAIGSFDGLHLGHQHLIHQAQQAAKRLHAPLLVYTFDP-PSKVFM 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L+  S + ++L  +G    +   FT   A  S + F++ +    LE + +  G
Sbjct: 61  RGEGF--LTDLSEKLELLRGLGVEIALIVPFTEAFARRSKDDFLEDL--RTLEARQIYVG 116

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+ RAG    L             I  L       V SS IR  L +G V  A  
Sbjct: 117 ADFRFGQGRAGGLEDL------NTVAPTQILPLLELGGSPVKSSRIRDLLRRGDVDEARL 170

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LLG  +T    V  G+++GR LGFPTAN++++P  +L  GV+A+R +T  Q  + G+AN 
Sbjct: 171 LLGRAYTARGIVREGDRLGRQLGFPTANLEVAPLKILPLGVFAVRVQTP-QGRFGGMANV 229

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+     L  E  +F F+ ++YGQ  TV F   LR E+KF+ +E LK  + +D + 
Sbjct: 230 GYRPTVA-GQTLRFEVHLFGFAGDLYGQELTVEFLTRLRGEMKFESLEALKAQLAQDAEA 288

Query: 305 ARKIL 309
           AR++L
Sbjct: 289 ARRLL 293


>gi|325479363|gb|EGC82459.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 313

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 8/307 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
           ++N  LP  L+   V++GNFDG+HLGH  +++  ++I+   N    VL F  + +  ++ 
Sbjct: 9   DLNIDLP-DLERKAVSLGNFDGVHLGHQKLMKNNLEISKKYNLEPAVLLFKENTKLRLKQ 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 ++    + +IL  MG        F  +  N S  +FI +++ + L    VI G 
Sbjct: 68  EK--EYMTSLEDKIEILASMGIETFCLIDFDEKFMNLSPREFISEIINKKLNASYVICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFGK  +GD   L K  E+Y + T  +D  + +    +SS++IR  + +G++  A  L
Sbjct: 126 DYRFGKKASGDIETLDKFEERYDYKTSVVDFEKEDHDNKISSNHIRDIIREGNIKKANRL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LG  + I+  V+ G K GRTL FPTAN+ LS   +L  +GVY  +    D   Y G+ N 
Sbjct: 186 LGRNYKIKGRVVDGMKRGRTLNFPTANLDLSFNYVLPVDGVYLTKVNV-DNEFYYGLTNI 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT   N    +E++I DF + IYG+  ++ F D+ R +IKF   E L   M  D+ K
Sbjct: 245 GTNPTF-ENADRKIETYILDFDKNIYGKDISIEFIDFFRYDIKFDSKEDLIDQMNSDKAK 303

Query: 305 ARKILES 311
           AR  LE+
Sbjct: 304 ARLYLEN 310


>gi|168333341|ref|ZP_02691625.1| riboflavin biosynthesis protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 303

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 5/287 (1%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            +V IGNFDG+HLGH  +   A++   +  +  LSF PHP  I+  +     ++P   + 
Sbjct: 14  SIVVIGNFDGVHLGHQKLFAAAVEAKGDMDVLALSFFPHPTWILSGAKK-EIITPTRDKI 72

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++++ +G    + Y FTLE AN +A  F  K+L+E L+ K V+ G  +RFGK R      
Sbjct: 73  EVMKSLGVDIFVEYPFTLELANMNAYDFFDKILIEDLKAKVVVVGEDYRFGKARKAGIAE 132

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L +  EK G     + +L   + + VSS+ IR  L +G V +A+ LLGY + I   VI G
Sbjct: 133 LAEMCEKKGVRLCVVKKLM-LEGEKVSSTQIRRYLAEGAVEDASKLLGYTYKIVGKVIKG 191

Query: 200 EKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +++GRT+GF TAN+     +L  K GVYA + +  +   +  + N G NPT+      ++
Sbjct: 192 KQLGRTIGFKTANISTKEGVLYPKNGVYATKVKVYN-KEFLAITNIGYNPTV-GGKVKMI 249

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           ES IFDF +EIY +   VSF  ++RPE KF ++  LK+ +  D++K 
Sbjct: 250 ESNIFDFEKEIYDEEIEVSFLKFIRPEKKFVNLNDLKMQIITDKEKT 296


>gi|313124015|ref|YP_004034274.1| riboflavin kinase / fmn adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280578|gb|ADQ61297.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 313

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I    + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAAEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPAFAKGRFDIKVV---PKQIFAGKKIGSTEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L  P +L K GVYA   +  D  
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELDWPKVLPKIGVYATMTQVGD-R 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF DI  L  
Sbjct: 235 WYQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADIAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  +     S
Sbjct: 295 QLKLDQVASENYFSS 309


>gi|225630376|ref|YP_002727167.1| riboflavin biosynthesis protein RibF [Wolbachia sp. wRi]
 gi|225592357|gb|ACN95376.1| riboflavin biosynthesis protein RibF [Wolbachia sp. wRi]
          Length = 310

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+      P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERELPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +     SSS IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTIDGKICSSSS-IREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQD--Q 235
           +  A  LLG  + +   V  G   GR +GFPT N+ +   ++  K G Y  R    D   
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIEDCMIKPKFGTYYARVTFPDSNP 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GV N G  PT       ++E  IFDF +++Y  +  +    ++R E KF  IE+L 
Sbjct: 234 NWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKFHSIEELT 293

Query: 296 IYMGEDEKKARKI 308
             +  D  K  ++
Sbjct: 294 KQINYDILKVYRL 306


>gi|220915774|ref|YP_002491078.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953628|gb|ACL64012.1| riboflavin biosynthesis protein RibF [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 323

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 97/321 (30%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHP 59
            VF + E   +    L+GG VAIGNFDG+HLGH  + E  +A   +      VL+F PHP
Sbjct: 6   QVFRSPE-QAAAAGVLRGGAVAIGNFDGVHLGHQKLAEVARAWAASRGRSAGVLTFEPHP 64

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++       ++P   + ++L  +G  A +   F L  A   A +F  + L   LEV 
Sbjct: 65  VRVLRPQLAPRVITPLPRKLELLAGLGLDAAVVQPFDLGYAGTPAAEFAARDLAGRLEVA 124

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V+ G  F  G+DRA     L+   E++G     +D +  +   +VSS+ +R  L +G+V
Sbjct: 125 DVVVGWDFTAGRDRA-RVDALRPLLERHGISLHVVDPVTVD-GLVVSSTKVREFLREGNV 182

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-- 237
             AA LL   + ++ +V  G   GR  GFPTAN+  +  +L   GVY +R          
Sbjct: 183 EAAAQLLTRPYDLDGEVARGAGRGRGFGFPTANVATTG-LLPANGVYVVRAELGGAHRET 241

Query: 238 -------YSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFK 289
                  + GV N G  PT+      + E+ +F F   ++YG    ++F   LR E +F 
Sbjct: 242 GLSGAAVHGGVCNVGVKPTVESGASPVAEAHLFGFDGRDLYGTPIRLAFLARLRDEQRFP 301

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            +E L+  +  D + A ++L 
Sbjct: 302 SVEALRAQIARDVEAAHRVLA 322


>gi|281422624|ref|ZP_06253623.1| riboflavin biosynthesis protein RibF [Prevotella copri DSM 18205]
 gi|281403294|gb|EFB33974.1| riboflavin biosynthesis protein RibF [Prevotella copri DSM 18205]
          Length = 318

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M+  H  +I Q     L   V  IG FDG+H GH  ++ Q ++ A       TV++F+ H
Sbjct: 7   MNTIHYNDIVQ-----LPPCVATIGFFDGVHRGHQFLIHQLVETARKDGLQSTVITFDAH 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ +      LS    +  +L K      +   F    A  SA +F+Q+VL + L V
Sbjct: 62  PRKVLLADYQPEMLSTLDSKLLLLSKTEVDNAVVLHFDKAMAAMSAREFMQQVLHDHLNV 121

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G   RFG +R        + G++ G   +  +  + +    +SSS IR+ L +G 
Sbjct: 122 RKLFIGYDHRFGHNREETFEDYVRYGKEMGIEVIRNEAFQID-GINISSSVIRSFLKEGE 180

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT 236
           V  AA  LG+ +T+   V++G   GR LGFPTAN+ +S    ++   GVYA+R R ++  
Sbjct: 181 VEMAARSLGFPYTLIGKVVNGFHEGRKLGFPTANLDISHFGQLIPAPGVYAVRVRLENMV 240

Query: 237 SYS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            +  G+ N G  PT      L LE+ IF+F  +IY Q   VSF   +R E KF   E+L 
Sbjct: 241 EWKRGMMNVGNRPTFN-GRQLTLETHIFNFEGDIYDQLLLVSFVKRIRGEQKFDSPEELA 299

Query: 296 IYMGEDEKKARKILES 311
             + EDE+    + E 
Sbjct: 300 AQLKEDEQTVLDLFEK 315


>gi|312134902|ref|YP_004002240.1| riboflavin biosynthesis protein ribf [Caldicellulosiruptor
           owensensis OL]
 gi|311774953|gb|ADQ04440.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           owensensis OL]
          Length = 305

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 80/310 (25%), Positives = 151/310 (48%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +      P       VA+G FDG H+GH  + E     A      V +F  HP 
Sbjct: 1   MNVYEMVAKRVDTP------AVALGFFDGFHIGHKKLFEVLDANARGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   +    +     + +     G   +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLLGFDTK--HILTNEERLEFFRNYGIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  +VSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHVVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + ++ K+GVY       D   Y 
Sbjct: 172 LANCMLGFNFFINGTVKRGNRLGKKMGFPTINIKFDKEKVVPKKGVYIT-NTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ +    +++YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHVLGVDKDMYGKRVKIEFIDFVREEKKFSNIDELKNQIT 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 QDVEYVKALF 300


>gi|325520798|gb|EGC99808.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia sp. TJI49]
          Length = 287

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 6/291 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +     ++    + + L   G   ++   F    A+ + + F+++ LV  L  
Sbjct: 57  PREFFNPAGAPPRIAMLRDKLEALRDHGVDRVVVEHFNHTFASQTPQAFVERTLVGGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F +G  RAG    L+  GE+YGF    +  +  +    +SSS +R AL  G 
Sbjct: 117 RWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTIAGSDGTRISSSGVRAALAAGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  AA  LG+ + I   V HG K+GR LGFPT N+ ++       G++ ++         
Sbjct: 177 LDAAASALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFVVQVHGLGPAPL 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            GVA+ G  PT+  +G +LLE  + D+  + YG+   V F   LR E KF 
Sbjct: 237 PGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFD 287


>gi|238019435|ref|ZP_04599861.1| hypothetical protein VEIDISOL_01304 [Veillonella dispar ATCC 17748]
 gi|237864134|gb|EEP65424.1| hypothetical protein VEIDISOL_01304 [Veillonella dispar ATCC 17748]
          Length = 310

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 156/316 (49%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M   H+ +  + + +     V A+G FDGIH GH  ++ +A+   +A N    +++F  H
Sbjct: 1   MKQIHSFDELRQIKDTK---VYALGTFDGIHRGHQRVIHKAVDEAMAVNGVSIIITFEHH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI+        +    I + +LE +    ++R   T E    SA+ F+  +  + + V
Sbjct: 58  PLTILHPDRVPKRVIQEEIMDSVLEDLNVDYILRLPMTEELLKMSADDFLGALCTD-MNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTALTKG 177
             ++ G  F FG    G+   +++         +    L  +  S  +SS+ IR A+ +G
Sbjct: 117 AAIVIGENFTFGAKGLGNPDYMKQVLADKNIQVLVQPLLPCDGLSTPISSTEIRKAIREG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            + +A H LG  F  +  VI G++ GRTLGFPT N+ L  ++    +GVYA R    D  
Sbjct: 177 RLEDATHWLGRPFQFKGTVIKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANR-VCIDGI 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N     E  +F+F Q+IYG+   V F  YLR E+KF +++ L  
Sbjct: 236 WYDGVGNIGDNPTF-KNQYHRCEVHVFNFDQDIYGKEVIVQFISYLRGEVKFNNLQDLID 294

Query: 297 YMGEDEKKARKILESS 312
            M  DE++A  +L  +
Sbjct: 295 QMKVDEEQALAVLAKA 310


>gi|148244185|ref|YP_001218879.1| bifunctional riboflavin biosynthesis protein RibF [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326012|dbj|BAF61155.1| bifunctional riboflavin biosynthesis protein RibF [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 300

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 15/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +   Q+L  HL G VV IGNFDG+H+GH  I++  +  A   N P  ++SF+P 
Sbjct: 1   MKIIRGL---QNLKPHL-GSVVTIGNFDGVHIGHQKIIKTLVNKAQIMNLPSVIVSFSPT 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     +    TLS    +  +L  +G    +   F    +  +A  FI ++L++ L+V
Sbjct: 57  PQHFFGHAQA--TLSSFKQKHALLTSLGVDEHLLINFNASFSQLTANTFIHEILLDKLKV 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  + G  FRFG ++ GD  +LQ     + F       +  N  + VSSS IR +L KG+
Sbjct: 115 KLCLVGDDFRFGSNQTGDFSLLQT----FNFEVEKTPTVLYNLDR-VSSSKIRQSLKKGN 169

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG +F+I   +IH +K GRT+GFPT N+ +   I    G++A+         Y
Sbjct: 170 FYLANQLLGRKFSISGKIIHCQKQGRTIGFPTINIPIKRKISPLLGIFAVNVELNG-KIY 228

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GV N G+ PT+     +LLE F+FDF++++YG+   V F   +R E KF     LK  +
Sbjct: 229 NGVCNLGKRPTV-GGETILLEVFLFDFNKQVYGEYTKVIFKYKIRDEQKFNSFLALKEQI 287

Query: 299 GEDEKKARKIL 309
             D K A+   
Sbjct: 288 KLDVKNAKFFF 298


>gi|258591355|emb|CBE67654.1| Riboflavin biosynthesis protein RibF [NC10 bacterium 'Dutch
           sediment']
          Length = 335

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/308 (29%), Positives = 153/308 (49%), Gaps = 6/308 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ 64
           IE  + L        VA+G FDG+HLGH  IL + ++ A+       V +F+ HP  ++ 
Sbjct: 4   IEQIEDLEQGYPFPAVAVGTFDGVHLGHREILGRVVRRAHQEEGTAVVFTFSRHPLEVVN 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            S     L+P  I++ I+  +G   +I   FT   A  +   F+   +V+ L+ + V  G
Sbjct: 64  PSKAPPLLTPLPIKQDIMAALGVDLMIAVGFTPSLAATAPRDFVNTYMVDRLQARFVCIG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             F FG+ RAG   +L+  GE++ F    +  +  +  Q+VSS+ IR  L +G +  A  
Sbjct: 124 YDFAFGQARAGSPELLRALGEEHQFELDVVPAMTAD-GQVVSSTRIRGLLARGELREATR 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            LG  + +   V  G + GR LG+PTAN+  + D+++ +GVYA       Q     + N 
Sbjct: 183 CLGRPYAVMGQVERGAERGRWLGYPTANLAATGDLIVPDGVYAG-MVWLKQRLQKALINV 241

Query: 245 GRNPTMVPNGPLLLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           GR PT        +E  + +    E+YG+  T+ F + LR E +F D   L+  +  D++
Sbjct: 242 GRAPTF-GGEVRRVEVHVLEADEGELYGEMLTLLFLERLRDERRFDDPSLLRRQIDYDKR 300

Query: 304 KARKILES 311
           +A +I  +
Sbjct: 301 QADEIFTA 308


>gi|251780265|ref|ZP_04823185.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243084580|gb|EES50470.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 308

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H+GH  ++++ I+IA   N    V +F  HPR  I  ++ +  L     + 
Sbjct: 18  VALGSFDGLHIGHLSLIDEVIRIARKNNGKSMVFTFKNHPRKFINPNNTLKLLMENDDKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE  G        F  E    + E+FI+ + V  L +K ++ G  ++FG    GD  +
Sbjct: 78  KMLEDKGIDIAYFANFNEEFMKITPEEFIKFLCVN-LNIKGIVVGFNYKFGYKNLGDTKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +KYG+    +D     K +++SS+ IR  L  G+V  A+ +L   + I+ +++HG
Sbjct: 137 LKELQKKYGYELHVMDS-CTYKDEVISSTRIRRELEAGNVSEASIMLNRPYFIKGEIVHG 195

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +IGR +GFPTAN++ + D IL K GVY    R  +   Y G+ N G NPT+     + L
Sbjct: 196 REIGRIMGFPTANLKYNKDTILPKIGVYYTNVRVNN-KIYRGITNIGNNPTVN-GKEITL 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ I DF  +IYG    V F   +R + KF  ++ L   +  +   A K
Sbjct: 254 ETNILDFDNDIYGNTIEVYFIKKIRDQKKFDSVDDLVNELKNNRLSAEK 302


>gi|116492659|ref|YP_804394.1| FAD synthase [Pediococcus pentosaceus ATCC 25745]
 gi|116102809|gb|ABJ67952.1| FAD synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 314

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 14/319 (4%)

Query: 1   MHV--FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFN 56
           M +   H+    + +P   +   +A+G FDG+H GH  +++QA + A      +  ++FN
Sbjct: 1   MQIVRIHHPYSKKIIPA--EPVALALGFFDGVHRGHQAVIKQACQKAREQHLKVAAMTFN 58

Query: 57  PHPRTIIQSS---SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            H   + +     SP+  L+    + +++ ++G   L    FT    + S E F+Q+ +V
Sbjct: 59  HHASVVFEQDRNFSPLSYLTSVERKAELMRELGVDILYVVDFTSAFGSLSPEDFVQQYMV 118

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  K V+ G  + FG     +   L    +   F  + + ++   K+  + S  IR  
Sbjct: 119 D-LNAKVVVAGFDYTFGPAELANMDTLPALAQGR-FEVIKVSKI-ILKNDKIGSDKIREM 175

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRT 232
           ++ G++ +A   LGY F     V+HGE  GR LGFPTAN+      I    G+Y +  + 
Sbjct: 176 VSLGNIDDANAYLGYAFQTSGVVVHGEARGRELGFPTANIVSNENQITPGIGIYVVEIKV 235

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             Q  Y G+A+ G+N       P+  E  I DF + IYG+   V ++  LR EIKF  ++
Sbjct: 236 GGQ-WYKGMASVGKNVVFGEGRPVTTEINILDFKEAIYGETVKVKWYHRLRGEIKFDSVD 294

Query: 293 KLKIYMGEDEKKARKILES 311
            L   + +DE   R+    
Sbjct: 295 ALIEQLHQDEADTREFFNK 313


>gi|329577069|gb|EGG58542.1| riboflavin biosynthesis protein RibF [Enterococcus faecalis TX1467]
          Length = 316

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 12/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H  E NQ +PN  +  V+ +G FDG+H GH  ++E   KI       + V++FN H
Sbjct: 4   IQLHHPYEPNQ-IPN--EEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + Q   P  +  L+    +E+++  +G   L   +FT   A    + F+ + +V  L
Sbjct: 61  PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVN-L 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                ++G  + +G         L    +   F  V + +     ++ +SS+ IR  +  
Sbjct: 120 NSAVAVSGFDYTYGPKEIAGVKQLPTYAQGR-FEVVTVPKEEMTGAK-ISSTRIREKMEA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQ 235
           G +     LLGY +  E  V+HG+  GR LGFPTAN+++   +   + GVYA++      
Sbjct: 178 GEMEEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRFSRIGVYAVQIEV-GS 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + G N T      L +E +I DF Q+IYG++  V +  YLR ++KF   E L 
Sbjct: 237 KWYVGMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALI 296

Query: 296 IYMGEDEKKARKILESS 312
             + +DE+      + S
Sbjct: 297 DQLKQDERDTADYFQQS 313


>gi|253682187|ref|ZP_04862984.1| riboflavin biosynthesis protein RibF [Clostridium botulinum D str.
           1873]
 gi|253561899|gb|EES91351.1| riboflavin biosynthesis protein RibF [Clostridium botulinum D str.
           1873]
          Length = 310

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 9/298 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   +A+G+FDG+H+GH  ++++ I++A   N+   V +F  HP T+I +      +   
Sbjct: 14  EKTYIALGSFDGLHIGHMSLIDKTIELAKANNAKSMVFTFKNHPLTVINNDIAPKLIINN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K+LEK G   +    F       S E FI+ + +    VK +I G  +RFG    G
Sbjct: 74  ETKTKLLEKAGIDIVNYANFDDIFMKISPEDFIENM-LTHYNVKGIIVGFNYRFGYKNLG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K   K GF    I+ ++ N    VSS+ IR  +++G ++ A   L   F ++  
Sbjct: 133 DIDLLKKLSCKLGFDLKIINPVKINNEV-VSSTRIRQLISEGDIVKANTFLNRNFVLKGK 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+++GR + FPT N+      +L + GVY       +   Y G+ N G NPT+  + 
Sbjct: 192 VMHGKQLGRKINFPTTNLDYDKKFVLPRGGVYYTSVNYNN-KKYKGITNIGYNPTV-KDE 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA--RKILE 310
            L +E+ I DF +EIY +   + F + +R E KF  IE+L   + +D+K A  + I+E
Sbjct: 250 KLSIETHILDFQKEIYDEILEIYFHERIRDEKKFDSIEELANQLTKDKKYALSKNIIE 307


>gi|28210965|ref|NP_781909.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           tetani E88]
 gi|28203404|gb|AAO35846.1| riboflavin kinase [Clostridium tetani E88]
          Length = 318

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 8/285 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+HLGH  ++++AIK+A   N    V +F  HP  +I  +     L   S + 
Sbjct: 20  VALGSFDGLHLGHMKLIDKAIKLAKENNGKSMVYTFKNHPLGVINENLAPKLLMDNSTKI 79

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L+  G   L    F       S E FI  + ++   +K ++ G  FRFG   +GD  +
Sbjct: 80  EVLKNKGVDILRFICFDKNFMEISPEDFILNI-IKQYNIKGIVVGFNFRFGHKNSGDVEL 138

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG-HVLNAAHLLGYRFTIESDVIH 198
           L++  +KY F    +  +  N    VSSS IR  +++  +V  A  +L + + +E +VI 
Sbjct: 139 LKELSKKYDFQLFIVGPVEYNDEV-VSSSRIRKTISEYGNVEEAKEMLPHPYFLEGNVIK 197

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G +IGR +GFPT N+  + D ++ K GVY       +   Y G+ N G NPT+     L 
Sbjct: 198 GRQIGRKMGFPTINLNYNKDFVIPKNGVYFT-GVLYNSKFYKGITNIGYNPTVKS-KKLN 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +E+ + +F++EIYG++  + F   LR E KFK +E+L + + +D+
Sbjct: 256 IETHVLNFNEEIYGEKIRLYFLSRLRNEKKFKSLEELSLTIKKDK 300


>gi|289548416|ref|YP_003473404.1| riboflavin biosynthesis protein RibF [Thermocrinis albus DSM 14484]
 gi|289182033|gb|ADC89277.1| riboflavin biosynthesis protein RibF [Thermocrinis albus DSM 14484]
          Length = 314

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 8/294 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
             + +G FDG+HLGH  +L++ +K     N    VLSF PHP  ++  S     L+    
Sbjct: 27  TALTVGVFDGVHLGHVHLLKRLVKVAERKNLMSCVLSFYPHPARVLAPSQAPCELTTVEE 86

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +++   G   ++  KF    ++  AE FI+ V+   L  K ++ G  +R+G  R G+ 
Sbjct: 87  RAELILATGVDTVVFIKFDRRFSSTKAEDFIRDVVHHRLRCKHLLVGYDWRYGFRREGEI 146

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            + ++ G+  GF    I+  +  K  +VSS+ IR  L +G +  A   LG  + I   V+
Sbjct: 147 ELARELGKDLGFEVEGIEPFQV-KGHVVSSTLIRRLLHEGRLEEAKEFLGRYYYIVRRVV 205

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            GE  G ++G PTAN+  + ++ LKEGVYA+           GVAN+G  PT        
Sbjct: 206 RGEGRGSSIGVPTANLDHTENLCLKEGVYAVMV----NDHLPGVANYGYRPTF-DGKRKT 260

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LE  I   S  + G+   V F  +LR E KF+ +E+L+  + +D   A  IL  
Sbjct: 261 LEVHIIGSSVNVRGKWLKVEFRAFLREERKFQRVEELREQIQKDISTALAILSK 314


>gi|225374831|ref|ZP_03752052.1| hypothetical protein ROSEINA2194_00452 [Roseburia inulinivorans DSM
           16841]
 gi|225213292|gb|EEG95646.1| hypothetical protein ROSEINA2194_00452 [Roseburia inulinivorans DSM
           16841]
          Length = 307

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/296 (32%), Positives = 154/296 (52%), Gaps = 6/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +  V+++G FDGIH GH L++E+ A K        + +F+  P+  ++       L+   
Sbjct: 14  EPTVISLGKFDGIHRGHELLMEKLAQKKEEGLKAAIFTFDIPPKKNVEHIEA-KVLTTNE 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  I E +G   LI   FT E      E FI+ + VE L VK ++ G  F FG +R GD
Sbjct: 73  EKMHIFEGIGIDYLIECPFTREVMCMEPEDFIRML-VEKLNVKCIVAGEDFHFGHNRRGD 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++    YG+  + + +++ ++ + +SS+ +R  +  G++  A HLLGYR+ +   V
Sbjct: 132 YQMLKRYALVYGYEALILSKMKEDE-RDISSTFVREEIMAGNIEKANHLLGYRYFVTGMV 190

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG +IGRT+G PT N+    + +L   GVY       D   Y GV N G  PT+  N P
Sbjct: 191 KHGNQIGRTIGIPTINLIPPEEKLLPPFGVYVTEVFIDD-KRYYGVTNVGCKPTIKGNNP 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +E+ + DF +++Y +  TV F   +R E KF+ IEKL+  M  D    R     
Sbjct: 250 VGVETHLLDFREDVYEKVVTVEFRTMIREERKFESIEKLQEQMMNDIAFTRAFFAK 305


>gi|325267567|ref|ZP_08134219.1| riboflavin biosynthesis protein RibF [Kingella denitrificans ATCC
           33394]
 gi|324980917|gb|EGC16577.1| riboflavin biosynthesis protein RibF [Kingella denitrificans ATCC
           33394]
          Length = 365

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 148/314 (47%), Gaps = 15/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M ++      Q+ P+  +G  + IGNFDG+H GH  IL++        N     + F P 
Sbjct: 51  MKIW----FGQNAPHLPQGSALTIGNFDGVHTGHRHILQRLHVQAQERNLHAIAMIFEPQ 106

Query: 59  PRTII---QSSSPIFTLSPPSIQEKILEKMGFSA-LIRYKFTLETANYSAEQFIQKVLVE 114
           P               ++P   +  +L + G    +   +F    A   AE FI+  L E
Sbjct: 107 PAEFFSRAAKQPAPSRITPLRDKLHLLAQTGCLHGVWVQRFNAHCAQTEAEDFIRNTLRE 166

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + ++ G  FRFGK R GD  +L     +  F T     +     +  SS+ +R AL
Sbjct: 167 RLNTRYLLVGDDFRFGKARGGDFALL---SAQADFVTERTPSILV-AGERASSTAVRQAL 222

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  +LG+ +++   V HG KIGRTLG PTAN+ L       +GV+ +  R   
Sbjct: 223 AEGSLHRAEQILGHGYSLSGRVKHGAKIGRTLGCPTANIHLPSHTYALQGVFVVSVRGA- 281

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               +GVA+FGRNPT+       LE  + DF  ++YGQR  + F   LR EIKF D+  L
Sbjct: 282 FGECAGVASFGRNPTVSDTPAAKLEVHLLDFHGDLYGQRLHIRFLHKLRDEIKFADLGSL 341

Query: 295 KIYMGEDEKKARKI 308
           +  +  D   AR+ 
Sbjct: 342 QTQIAADILAARQW 355


>gi|310658990|ref|YP_003936711.1| bifunctional riboflavin kinase/fmn adenylyltransferase [Clostridium
           sticklandii DSM 519]
 gi|308825768|emb|CBH21806.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           sticklandii]
          Length = 310

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 13/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M+++ +++         K   V IGNFDG+HLGH  ++ + I I     I   + +F+ H
Sbjct: 1   MNIYSSLDNI----AFDKPTAVTIGNFDGVHLGHRELINRTIAIGEEKDILPVMFTFSNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   +     I  L+    + KI+E+MG   L+   F     + S E F +++L+  L  
Sbjct: 57  PLEFLYQKQ-IDYLTSFEQKVKIIEQMGIKDLVSVPFDYTIKDMSTEVFAKEILLSKLNA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G   + G  R G    L + G+K GF    +  +   ++  VSSS IR  +  G 
Sbjct: 116 TDIIMGFDSKLGNGRQGSVDYLYEVGKKLGFDVHIVQPVMI-ENMRVSSSFIRELIKTGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V  A   LG ++ +E  V+HG+K+GR LGFPTAN++++ DI L K GVY  +   +D   
Sbjct: 175 VKRADFFLGRKYMLEGKVVHGKKLGRKLGFPTANLEVNQDILLPKRGVYYCKIEIED-KI 233

Query: 238 YSGVANFGRNPTMVPNGPLL---LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           Y    + G NPT+  N P     +E+ I +F  +IYG+   + F D LR E++F  ++ L
Sbjct: 234 YDAAVSIGYNPTIQSNKPFQEIFVEAHILEFEDDIYGKSVKLYFMDRLRDELRFNSLDDL 293

Query: 295 KIYMGEDEKKARKIL 309
              +  D  + +  +
Sbjct: 294 IRQLNRDVLRIKNYI 308


>gi|257452005|ref|ZP_05617304.1| FMN adenylyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317058554|ref|ZP_07923039.1| riboflavin kinase [Fusobacterium sp. 3_1_5R]
 gi|313684230|gb|EFS21065.1| riboflavin kinase [Fusobacterium sp. 3_1_5R]
          Length = 321

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 10/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH  I+++A++ A        V +F  H
Sbjct: 1   MKVIKNI---LDIEENLQKSYVAIGNFDGLHTGHRTIIKRAMERAKEKDGVSIVFTFQNH 57

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT + A+ +  +F++ +L   L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQDFADLTPLEFVR-LLKNKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ +  G  F FGK        L   GE  G +      + + +   +SS+ IR ++  G
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGEGEGIYVHEFKAITSGEDV-ISSTLIRKSMMTG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               A  LLG+   +  +VIHG+KI R LGFPTAN+Q+   +    G+Y  + + + +  
Sbjct: 176 EFERALKLLGHPMIVIGEVIHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQIEGEDQ 235

Query: 238 YS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+ P G   LE  I +F ++IYG++  +   +YLR E KF  +E+L  
Sbjct: 236 IRYGVINVGVNPTLKP-GEFSLEVHILNFDEDIYGKKMYIELMEYLRTEEKFDSVEELVA 294

Query: 297 YMGEDEK 303
            +  D  
Sbjct: 295 CIANDVA 301


>gi|320334244|ref|YP_004170955.1| riboflavin biosynthesis protein RibF [Deinococcus maricopensis DSM
           21211]
 gi|319755533|gb|ADV67290.1| riboflavin biosynthesis protein RibF [Deinococcus maricopensis DSM
           21211]
          Length = 298

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 14/293 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            VVA+G+FDG+HLGH  +L +  + A +   P  V +F+P  R ++Q    +  LS    
Sbjct: 15  TVVAVGSFDGVHLGHQALLARLKERARHYRVPSVVYTFDPPTRVLMQG---VEFLSTLPE 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L + G   +I   FT E A    + F+  +    L  + ++ G  F FG+ RAG  
Sbjct: 72  KLDLLARFGVDEVIAVPFTREFAARPKDAFLDDL--RTLRPRALVVGEDFHFGRGRAGGV 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++         V    +     + + S+ IR  L +G V +A   LG  +     V+
Sbjct: 130 ADLREVTAD-----VVPLPMHGLNGEDIKSTRIRAHLQQGDVTSANRFLGRHYDAAGVVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+++GRT+GFPTAN+++     L  GV+A+   T D   Y G+AN G  PT+       
Sbjct: 185 RGDQLGRTIGFPTANIRVPEGKALPLGVFAVSVTT-DHGRYGGMANIGMRPTVN-GTERR 242

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            E  + DF  ++YGQ   V F+ +LR E +F  ++ LK  + ED+ +AR  L 
Sbjct: 243 FEVNVLDFEGDLYGQEIVVKFYQHLRAEQRFSGLDALKAQLHEDQAQARAALR 295


>gi|313893719|ref|ZP_07827286.1| riboflavin biosynthesis protein RibF [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313441733|gb|EFR60158.1| riboflavin biosynthesis protein RibF [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 310

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M   H+ +  + + +     V A+G FDGIH GH  ++ +A++ A   N    +++F  H
Sbjct: 1   MKQIHSFDELRQIKDTK---VYALGTFDGIHRGHQRVIRKAVEEAASVNGVSIIITFEHH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI+        L    I   ++E +    ++R   T    N  A++F+  +  +   V
Sbjct: 58  PLTILHPERVPKRLIQEDILNTVIESLQVDYILRLPMTEALLNMRADEFLDALCKDT-NV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-SQIVSSSNIRTALTKG 177
           + ++ G  F FG    G+   +++         +    L  +  S  +SS+ IR A+ +G
Sbjct: 117 EAIVVGENFTFGAKGLGNPEYMKQVLADKAIQVLVQPLLPCDGLSTPISSTEIRKAIREG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
            + +A H LG  F  +  VI G++ GRTLGFPT N+ L  ++    +GVYA R    D  
Sbjct: 177 RLEDATHWLGRPFQFKGTVIKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANR-VCIDGI 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N     E  +FDF Q+IYG+   V F  YLR E+KF +++ L  
Sbjct: 236 WYDGVGNVGDNPTF-KNQYHRCEVHVFDFDQDIYGKEVIVQFISYLRGEVKFNNLQDLID 294

Query: 297 YMGEDEKKARKILESS 312
            M  DE++A  IL  +
Sbjct: 295 QMKVDEEQALAILAKA 310


>gi|254423413|ref|ZP_05037131.1| riboflavin biosynthesis protein RibF [Synechococcus sp. PCC 7335]
 gi|196190902|gb|EDX85866.1| riboflavin biosynthesis protein RibF [Synechococcus sp. PCC 7335]
          Length = 359

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 163/362 (45%), Gaps = 61/362 (16%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLIL---------------------------- 38
           + I  SL +      +A+GNFDG+HLGH  ++                            
Sbjct: 1   MWITSSLESAKVPTNIALGNFDGVHLGHRQVMAGILGDDTSLAAMRSLTPQSVSALHKSI 60

Query: 39  -----------------EQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
                            E + +   + P+  V++F PHP+      S    L+P + +  
Sbjct: 61  THQNSPWTEPTSIITSTETSFQAPKSGPLATVVTFKPHPQEYFSGISRP-LLTPIAEKIW 119

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            L ++G   L+   F    +  S E F++++LVE L  + +  G  FRFGK R+G    L
Sbjct: 120 QLSQLGIKQLVLLPFNQALSELSPEDFVEQILVEGLNAQRISVGNDFRFGKGRSGSADGL 179

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +     +      +  L+  +   +SSS IR AL  GH   AA LLG  +T+   V+ G+
Sbjct: 180 RAIAASHNIPVTQV-SLKYEQGDRISSSRIREALQNGHPETAARLLGRPYTLTGKVVKGK 238

Query: 201 KIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT-----------QDQTSYSGVANFGRNP 248
           ++GRT+GFPTAN+++     L + GVY++R              ++    +GV N G  P
Sbjct: 239 QLGRTIGFPTANLKVPSNKYLPRTGVYSVRVYGVSSTNRSGATSKNDRVLNGVMNVGNRP 298

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           T+     L +E  + D+  ++YGQ  TVS   ++R E KF+ IE+LK  +  D   A   
Sbjct: 299 TVN-GQSLSIEVHLLDWEGDLYGQLLTVSLEGFVRAEKKFESIEQLKGQIATDCNVAIAA 357

Query: 309 LE 310
           L+
Sbjct: 358 LK 359


>gi|311744156|ref|ZP_07717961.1| riboflavin biosynthesis protein RibF [Aeromicrobium marinum DSM
           15272]
 gi|311312511|gb|EFQ82423.1| riboflavin biosynthesis protein RibF [Aeromicrobium marinum DSM
           15272]
          Length = 301

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 15/300 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP-----ITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           V IGNFDG+H GH  ++++  ++A         +  ++F+PHP  +         L+  +
Sbjct: 2   VTIGNFDGVHRGHRHVVDRCRELAAALAPPVPTVVAVTFDPHPVQVFAPERAPVRLTSLT 61

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++L   G   +    F    A +S E+F+++VLV+ L    V+ G  FRFG   AGD
Sbjct: 62  RRVRLLRDAGADEVRVLAFDHAMAAWSPEEFVRRVLVDDLHAAAVVVGENFRFGHRAAGD 121

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +LQ+ GE++ F    +    +   +  SS+ +R  +  G V  AA +LG  F +E +V
Sbjct: 122 VALLQRLGEEHDFVAEGLA--LDGGDEDHSSTLVRRLVATGDVTGAADVLGRPFAVEGEV 179

Query: 197 IHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + G++ GR +G+PTAN+  +  + +  +GVYA  F            + G NPT      
Sbjct: 180 VRGDQRGREIGYPTANVPVVDGEAVPADGVYAGWFVRASGERLPAAVSVGTNPTF-DGTE 238

Query: 256 LLLESFIF------DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +ES++           ++YG+   V F   LR   ++  ++ L   M  D   AR+ L
Sbjct: 239 RRVESYVMASDGSARHDLDLYGEHVVVEFVLRLRAMERYDGLDALLEQMAADVDDARRAL 298


>gi|257466194|ref|ZP_05630505.1| FMN adenylyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917352|ref|ZP_07913592.1| riboflavin kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691227|gb|EFS28062.1| riboflavin kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 321

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 10/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M V  NI     +  +L+   VAIGNFDG+H GH +I+++A++ A        V +F  H
Sbjct: 1   MKVIKNI---LDIEENLQKSYVAIGNFDGLHTGHRMIIKRAMERAKEKDGVSIVFTFQNH 57

Query: 59  PRTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  +++     +  ++    +  +LEKMG   ++   FT + A+ +  +F++ +L   L 
Sbjct: 58  PMELLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQDFADLTPLEFVR-LLKNKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+ +  G  F FGK        L   GE  G +      + + +   +SS+ IR ++  G
Sbjct: 117 VEEIFVGFNFSFGKGGVAKTKDLVYLGEGEGIYVHEFKAITSGEDV-ISSTLIRKSMMTG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
               A  LLG+   +  +VIHG+KI R LGFPTAN+Q+   +    G+Y  + + + +  
Sbjct: 176 EFERALKLLGHPMIVIGEVIHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQIEGEDQ 235

Query: 238 YS-GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+ P G   LE  I +F ++IYG++  +   +YLR E KF  +E+L  
Sbjct: 236 IRYGVINVGVNPTLKP-GEFSLEVHILNFDEDIYGKKMYIELMEYLRTEEKFDSVEELVA 294

Query: 297 YMGEDEK 303
            +  D  
Sbjct: 295 CIANDVA 301


>gi|237738346|ref|ZP_04568827.1| riboflavin kinase [Fusobacterium mortiferum ATCC 9817]
 gi|229420226|gb|EEO35273.1| riboflavin kinase [Fusobacterium mortiferum ATCC 9817]
          Length = 318

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 162/324 (50%), Gaps = 10/324 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  NI     L  +L+   VAIG FDG+H GH  ++  A++ A        V +F+ H
Sbjct: 1   MRVIENI---FELEENLQESYVAIGTFDGVHYGHQKLIRNAVEKAKKNGGKSVVFTFSSH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I  S     ++    +  +LE MG   +I   F  E AN +A++F   +L E +  
Sbjct: 58  PMELIDISRAPRVINTIEEKLYLLENMGVDCVILQSFIKEFANLTADEFAD-ILKEKVGS 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FG+        L + GE+ G     I  +  +   ++SS+ +R  +    
Sbjct: 117 KEIFVGFNFSFGEGGKSKTKDLIRLGEERGILVHEIPAVYVD-GDLISSTFLRNRILHAD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +      LG+RF I  +V+HG+KI R LGFPTAN+++S  +  K G+Y  R + + +  Y
Sbjct: 176 IAEINRYLGHRFLIMGEVVHGKKIARELGFPTANIKISTRLYPKNGIYGARVKIEGEDFY 235

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GV N G NPT+ P G   +E  I DF + IYG+   V    YLR E KF  I++LK  
Sbjct: 236 RDGVVNIGVNPTLKP-GEKSVEVNILDFDEFIYGKIVAVELEQYLREEKKFSSIDELKRV 294

Query: 298 MGEDEKKARKILESSYP-LSERDR 320
           +G D K   K+++      S +DR
Sbjct: 295 IGNDVKTWTKVVKERRNGYSTKDR 318


>gi|50842952|ref|YP_056179.1| riboflavin biosynthesis protein RibF (riboflavin kinase)
           [Propionibacterium acnes KPA171202]
 gi|50840554|gb|AAT83221.1| riboflavin biosynthesis protein RibF (riboflavin kinase)
           [Propionibacterium acnes KPA171202]
          Length = 380

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 77  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 134

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+++V +  L+ + V+ G
Sbjct: 135 PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVG 193

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 194 QNFRFGRHAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 249

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR---TQDQT-SYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA         D      
Sbjct: 250 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 309

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG   TV+F + LR +IKF  IE L   M
Sbjct: 310 SAISVGTNPTF-DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQM 368

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 369 ADDVETAKRVLS 380


>gi|306833554|ref|ZP_07466681.1| riboflavin biosynthesis protein RibF [Streptococcus bovis ATCC
           700338]
 gi|304424324|gb|EFM27463.1| riboflavin biosynthesis protein RibF [Streptococcus bovis ATCC
           700338]
          Length = 313

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N  K  V+ +G FDG+H GH  + ++A +IA   N  +TVL+FN  
Sbjct: 4   MEI-QRIKDYKDITNA-KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNES 61

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR  +   +P   L  + P  + +   + G   L    FT   +  SA+ F++   ++ L
Sbjct: 62  PRLALSHFTPDLLLSLTSPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLENY-IKQL 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             KT++ G  ++FG DR     +     +++    V + E+++N  + +SS+ IR  +  
Sbjct: 121 RAKTIVIGFDYKFGHDRKDATDL----AQQFNGDVVVVPEVQDN-GEKISSTRIRQLIFD 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G++     LLGY F+    V+HG+  GRT+GFPTAN+    ++ L  +GVY +     + 
Sbjct: 176 GNIKEVNRLLGYNFSTRGIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVY-VSDVIVNG 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            SY  + + G+N T      L LE+ IFDF  EIYG+   + + D +R  +KF   ++L 
Sbjct: 235 KSYRAMTSVGKNITF-GGTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELI 293

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 294 EQLKSDKEVAANW 306


>gi|288905361|ref|YP_003430583.1| riboflavin kinase / FAD synthetase [Streptococcus gallolyticus
           UCN34]
 gi|288732087|emb|CBI13652.1| putative riboflavin kinase / FAD synthetase [Streptococcus
           gallolyticus UCN34]
          Length = 310

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N  K  V+ +G FDG+H GH  + ++A +IA   N  +TVL+FN  
Sbjct: 1   MEI-QRIKDYKDITNA-KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR  +   +    L  + P  + +   + G   L    FT   +  SA+ F++   ++ L
Sbjct: 59  PRLALSRFTSDLLLSLTSPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLENY-IKQL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             KT++ G  ++FG DR     +     +++    V + E+++N  + +SS+ IR  + +
Sbjct: 118 RAKTIVVGFDYKFGHDRKDAIDL----AQQFNGDVVVVPEVQDN-GEKISSTRIRQLIFE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G++     LLGY F+    V+HG+  GRT+GFPTAN+    ++ L  +GVY +     + 
Sbjct: 173 GNIKEVNRLLGYNFSTRGIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVY-VSNVIVNG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            SY  + + G+N T      L LE+ IFDF  EIYG+   + + D +R  +KF   ++L 
Sbjct: 232 KSYRAMTSVGKNVTF-GGTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELI 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 EQLKSDKEVAANW 303


>gi|163848499|ref|YP_001636543.1| riboflavin biosynthesis protein RibF [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526433|ref|YP_002570904.1| riboflavin biosynthesis protein RibF [Chloroflexus sp. Y-400-fl]
 gi|163669788|gb|ABY36154.1| riboflavin biosynthesis protein RibF [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450312|gb|ACM54578.1| riboflavin biosynthesis protein RibF [Chloroflexus sp. Y-400-fl]
          Length = 311

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +  ++    +     +  V+ IG FDG+HLGH  ++   ++ A        VL++ PH
Sbjct: 1   MQIARDLTPGLA----NRATVLTIGRFDGVHLGHQQLIRTTVERARALDMLSAVLTWEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++Q   P+  LS    + + + ++    L+   FT    N +A +++ ++ V  + V
Sbjct: 57  PRAVLQPGQPLQLLSDLDEKIEQIRRLEPDLLVIAPFTPAIRNLTAAEYMARI-VAAMPV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F  G+ R GD   L + G + GF    + +        VSSS IR  +  G+
Sbjct: 116 REIWVGEDFAMGRGREGDIPRLMEIGRELGFAVGALSKY-TVAGIPVSSSRIRELVLAGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           V  A  LLG  F +   V  G+  GR +GFPTAN+Q+S D+ L   GVYA R    D T 
Sbjct: 175 VAGAGALLGRPFALRGVVTRGDGRGRQIGFPTANVQVSSDVVLPANGVYACRAYLPDSTM 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              V N G  PT       ++E+ + D+  ++Y Q   +     LR E KF  ++ L   
Sbjct: 235 VPAVTNIGVRPTFA-GTQRVVEAHLLDWQGDLYDQPLRLELLIRLRNERKFNSVDDLVAQ 293

Query: 298 MGEDEKKARKIL 309
           +  D  +AR IL
Sbjct: 294 ITSDVAEARAIL 305


>gi|284048688|ref|YP_003399027.1| riboflavin biosynthesis protein RibF [Acidaminococcus fermentans
           DSM 20731]
 gi|283952909|gb|ADB47712.1| riboflavin biosynthesis protein RibF [Acidaminococcus fermentans
           DSM 20731]
          Length = 313

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +  +++       HL     A+G FDG+H GH  ++         ++  + V +F+ H
Sbjct: 1   MKLITSLDELHR--AHLLPSAAALGTFDGVHRGHQEVIGTTRTYARQHHLQLMVFTFSTH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++       L   + +EK++  +    L+   FT E A  SA+ F+Q ++   L V
Sbjct: 59  PLASLKPELEPPRLLDNAAKEKLMVDLEVDILVNIPFTRELAAMSADDFLQMLV--DLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  F FG    G+  +L+    ++G  T+    L      +VSS+NIR A+ +G 
Sbjct: 117 KAVGIGDNFSFGAGGKGNVRLLKTEHTRFGL-TILSRPLLKQDGLVVSSTNIRKAIAEGR 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQT 236
           V  AA +LG  + I   V+ G+  GR LGFPTAN++L      +   GVYA R    D  
Sbjct: 176 VELAAQMLGRPYAIRGQVVPGDHRGRLLGFPTANLKLLGQHFAVPAFGVYAGRVLV-DGQ 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + N G NPT   N    LE+ +F F  ++YG+   V     LR E KF D+++L+ 
Sbjct: 235 WHDAMVNVGDNPTFA-NQETRLEAHLFRFQGDLYGKEVRVQLVARLRGEEKFPDLDRLQE 293

Query: 297 YMGEDEKKARKILE 310
            + +D + A+ IL 
Sbjct: 294 QLRKDARNAQSILA 307


>gi|187735253|ref|YP_001877365.1| riboflavin biosynthesis protein RibF [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425305|gb|ACD04584.1| riboflavin biosynthesis protein RibF [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 311

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 14/304 (4%)

Query: 1   MHVFHNIEINQSL--PNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFN 56
           M ++   +  +SL  P H      A+G FDG+HLGH  ++  A+K  + +     VL+F 
Sbjct: 1   MVIYREFKELKSLAAPVHW-----AVGMFDGVHLGHAGVIAAAVKGAVLDGGIPAVLTFR 55

Query: 57  PHPRTIIQSSSPIFTLSPPS-IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
            HP   ++  S    +      +  ++E++G  A++  +F+   A+ S E+FI ++    
Sbjct: 56  THPLARVRPESVPPAIMGEDAEKFALMEELGVKAVLSLEFSSRLASMSPEEFIGELCSSC 115

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             V  +  G  + FG+ RAG+   L+    +YGF    +  +  +  + +SS+ IR A+ 
Sbjct: 116 -RVAQIAVGEDWHFGRGRAGNVETLRLLSCRYGFRVTAVPPILQD-GERISSTRIREAVR 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
           +   L  A +LG  +  +  VIHG ++GR L +PTAN++    +    GVYA+R R    
Sbjct: 174 EADFLQVAGMLGRPYRWKGPVIHGRQLGRLLDYPTANIRPGCGLQPPHGVYAVRARVAG- 232

Query: 236 TSYSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
             Y GVAN G  PT+    G LLLE+ +F    +IYG+   V    +LRPEIKF  +E+L
Sbjct: 233 KKYGGVANLGVRPTVEGETGELLLETHLFGHPGDIYGREMEVEPVRFLRPEIKFPSLEEL 292

Query: 295 KIYM 298
           K  +
Sbjct: 293 KSQL 296


>gi|325686004|gb|EGD28065.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 313

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPAFAKGRFDIKVV---PKQIFAGKKIGSTEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L  P +L K GVYA   +  D  
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELDWPKVLPKIGVYATMTQVGD-R 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L  
Sbjct: 235 WYQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  +     S
Sbjct: 295 QLKLDQVASENYFSS 309


>gi|306831441|ref|ZP_07464599.1| riboflavin biosynthesis protein RibF [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325978348|ref|YP_004288064.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|304426226|gb|EFM29340.1| riboflavin biosynthesis protein RibF [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325178276|emb|CBZ48320.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 313

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N  K  V+ +G FDG+H GH  + ++A +IA   N  +TVL+FN  
Sbjct: 4   MEI-QRIKDYKDITNA-KDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNES 61

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR  +   +    L  + P  + +   + G   L    FT   +  SA+ F++   ++ L
Sbjct: 62  PRLALSRFTSDLLLSLTSPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLENY-IKQL 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             KT++ G  ++FG DR     +     +++    V + E+++N  + +SS+ IR  + +
Sbjct: 121 RAKTIVVGFDYKFGHDRKDAIDL----AQQFNGDVVVVPEVQDN-GEKISSTRIRQLIFE 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G++     LLGY F+    V+HG+  GRT+GFPTAN+    ++ L  +GVY +     + 
Sbjct: 176 GNIKEVNRLLGYNFSTRGIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVY-VSDVIVNG 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            SY  + + G+N T      L LE+ IFDF  EIYG+   + + D +R  +KF   ++L 
Sbjct: 235 KSYRAMTSVGKNVTF-GGTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELI 293

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 294 EQLKSDKEVAANW 306


>gi|323141200|ref|ZP_08076101.1| riboflavin biosynthesis protein RibF [Phascolarctobacterium sp. YIT
           12067]
 gi|322414343|gb|EFY05161.1| riboflavin biosynthesis protein RibF [Phascolarctobacterium sp. YIT
           12067]
          Length = 307

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  ++E            VVA+G FDG+H GH  ++E A + A   NS + V +F+ H
Sbjct: 1   MEIITSLEQLHKFSA---PCVVALGTFDGLHRGHLDVIETAREKARECNSQLAVFTFSNH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   I+       L   + ++++L+++G   L+   F  + A+ S ++F+Q++  + L+ 
Sbjct: 58  PFEWIRPGMVPSALITGAQKQELLQQLGVDVLVDIPFNQQVADLSPQEFLQRL--QQLDY 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  F +G    G    L       GF    + EL +  + ++SS+ IR  +  G 
Sbjct: 116 SCLVVGANFTYGCRGQGTVYTLAASANAMGFEL-IVRELVSEGATVISSTAIRHLIAAGE 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQT 236
           V  AA +LG  ++I   V HG + GR LG+PTAN++L    +     GVYA+R     + 
Sbjct: 175 VAEAAAMLGRSYSISGTVAHGNERGRLLGYPTANIELEDAHVAVPLGGVYAVRVIVNGKN 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+AN G NPT        LE+ IFDF+ ++YG++ TV F   +R E+KF  IE+LK 
Sbjct: 235 -YHGMANIGYNPTFGDVAQPRLETNIFDFTGDLYGKQLTVHFEQRIRGEVKFAGIEQLKQ 293

Query: 297 YMGEDEKKARKILE 310
            + +D+      L 
Sbjct: 294 QLAQDKHDCEAALR 307


>gi|227544945|ref|ZP_03974994.1| FAD synthetase [Lactobacillus reuteri CF48-3A]
 gi|300910024|ref|ZP_07127484.1| FAD synthetase [Lactobacillus reuteri SD2112]
 gi|227185056|gb|EEI65127.1| FAD synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892672|gb|EFK86032.1| FAD synthetase [Lactobacillus reuteri SD2112]
          Length = 315

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 157/316 (49%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H +E  + +P      V+A+G FDG+H GH  ++++A +I      P+ VL+++  
Sbjct: 4   IKIHHPLE-KRLIPA--GPIVLAMGFFDGVHRGHQAVIKRAREIAREKGLPLVVLTYDHA 60

Query: 59  PRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  + +        LS    + ++L  +    +    FT   A+ S +QF+ + LV +  
Sbjct: 61  PGIVYRQYKGGFKYLSTVDRKLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF-H 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTALTK 176
            +TV+ G    +GK+      +L K      F  V + +   + S + V S  IR  +  
Sbjct: 120 AQTVVAGFDHTYGKEDIASMKLLPKYAAGR-FEVVTVPKFTEDGSQEKVGSREIRKLIDA 178

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  A   LGY +     V+HG   GRTLGFPT N++    + +   GVYA++ +   +
Sbjct: 179 GNVEAANQALGYPYQTTGLVVHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVK-LGK 237

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G N T      L +E  +FDF Q +YG+   V ++ YLR E KF   + L 
Sbjct: 238 KWYDGMASVGHNITFGDANQLTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADALV 297

Query: 296 IYMGEDEKKARKILES 311
             M +DE+ AR+ILE 
Sbjct: 298 AQMKQDEQNARRILEK 313


>gi|227431851|ref|ZP_03913875.1| FAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227352393|gb|EEJ42595.1| FAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 316

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 9/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFN 56
           M +   I ++  + +  K    VVA+G FDG+H GH  +L +A         P+ VL+++
Sbjct: 1   MTMTELIRLHYPILDFKKPVQQVVAMGFFDGVHRGHQAVLARAKTEAEKQGVPLAVLTYD 60

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP    Q+   P+  L+P + ++ I+ ++G   +   +FT + A    +QF+ +V V  
Sbjct: 61  PHPIVAFQTLKKPLRYLTPLAKKKSIMSQLGVDRVYVMQFTSKLAKLGGQQFVDEV-VMQ 119

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L   TV+ G    +G        +         F  + + E  ++ +Q VSSS IR+ L 
Sbjct: 120 LNPVTVVAGFDHLYGAAGTDSDMLHLATYATNRFDVITVSEF-DDYNQKVSSSTIRSMLD 178

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
           +G+V  AA  LG   +    V+HGE  GR LGFPTAN+Q   +  L   G+YA++ +  D
Sbjct: 179 QGNVDGAAQQLGRVHSTSGIVVHGEARGRELGFPTANIQTPEEEWLPGIGIYAVKIKVYD 238

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T Y G+A+ GRN T     P+ +E  I D+ +EIYG+   + +  YLR E+KF++++ L
Sbjct: 239 -TWYLGMASIGRNVTFGDARPITVEINILDYQEEIYGEFVQIQWCHYLRGEVKFENVQAL 297

Query: 295 KIYMGEDEKKARKILESS 312
              + ED ++ R    + 
Sbjct: 298 INQLNEDARQTRHYFNTK 315


>gi|227529112|ref|ZP_03959161.1| FAD synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350956|gb|EEJ41247.1| FAD synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 328

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 10/317 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHP 59
            + H ++  + +P      V+A+G FDG+H GH  ++  A KI    + P+ VL+++  P
Sbjct: 11  RIHHPLQ-KELVPA--GPVVLAMGFFDGVHRGHQQVINTAKKIAEEKDLPLAVLTYDHAP 67

Query: 60  RTIIQSS-SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             + Q        LS  S +  +L+++G   +    FT   A+ S ++F+ + L+ +   
Sbjct: 68  GIVYQQYPGGFKYLSTTSRKLDLLKQLGVDLVYLVSFTSSFASLSPQEFVDQYLIGF-HA 126

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           KTV+ G    +GK        L +      F+ + + +   N  Q + S  IR A+ +G 
Sbjct: 127 KTVVAGFDHTYGKAAVATMARLPEYANGR-FNVITVPKFTGNGKQKIGSRVIRKAIDQGD 185

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  A  +LGY +     V+HG   GRTLGFPT N++    + L   GVY ++ +   Q  
Sbjct: 186 VELANQMLGYYYMTTGIVVHGLARGRTLGFPTINVETPEGERLPGIGVYTVQVQI-GQKW 244

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+A+ G N T      L +E ++FDF Q +YG+   V +  Y R E+KF   ++L   
Sbjct: 245 YGGMASVGHNITFGDQNKLTVEIYLFDFDQLVYGEEVKVRWLYYQRGEMKFSGADELVDQ 304

Query: 298 MGEDEKKARKILESSYP 314
           M +DE+ AR+ L+   P
Sbjct: 305 MKQDEQLARQNLQKIVP 321


>gi|257455747|ref|ZP_05620975.1| riboflavin biosynthesis protein RibF [Enhydrobacter aerosaccus
           SK60]
 gi|257446875|gb|EEV21890.1| riboflavin biosynthesis protein RibF [Enhydrobacter aerosaccus
           SK60]
          Length = 339

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 32/327 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M+V  ++      P  L   V+ IGNFDG+HLGH  +L++A            V+ F P 
Sbjct: 3   MNVI-DLSDWLKSPTLLPDSVLTIGNFDGVHLGHQAMLDKAKSLAKCQQLASMVMIFEPQ 61

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+  + + +++ +    +LI   F  +  N SA  F + ++   L V
Sbjct: 62  PREFFSPQTAPARLTNLAEKTQLIAEHRIDSLIVANFDNDFRNLSAHDFAKMLV--KLNV 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN--NKSQIVSSSNIRTALTK 176
           K ++ G  FRFG DR GD   L+     +G     +  + +  ++ + VSS+ IR  L +
Sbjct: 120 KHLVLGDDFRFGHDRTGDSEFLR----VFGLPVQILHTVTDHAHQDERVSSTRIRDCLQQ 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +  A HLLG  + I   V HG+KIGRTL FPTAN+ L+       G++A+     D T
Sbjct: 176 GDLATAKHLLGRDYAITGMVEHGDKIGRTLDFPTANIALNRIKPALHGIFAVSVTATDGT 235

Query: 237 -------------------SYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCT 275
                              S  G  N G  P +         LE     F  ++YG+  T
Sbjct: 236 DLSTLGRNSQTGVQGLTKGSLFGACNVGTRPALKNKYGVEWRLEVNFPKFDGDLYGKELT 295

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           V+F  +L  E  +  ++ LK  + +D 
Sbjct: 296 VTFLHFLHGEKNYAGLDALKQGIAQDV 322


>gi|327540401|gb|EGF26987.1| riboflavin biosynthesis protein RibF [Rhodopirellula baltica WH47]
          Length = 323

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 8/310 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRT 61
             ++  +  L   L+GG V+IGNFDG+HLGH  +LE+              +  +PHP +
Sbjct: 7   LSDLAGDSDLHQSLQGGAVSIGNFDGVHLGHRALLERVRWHAQRVGGKAIAIVMDPHPAS 66

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +++      +L+  S + +++   G   L+  + T +  N +AE+F Q+++VE L  K +
Sbjct: 67  VLRPHGAPPSLTSLSRRAELMSGSGIDHLLVCEATRDFLNQTAEEFFQRLIVEQLSAKAI 126

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           I G  F FG+DRAG+   L++   +      + +  +R+   ++VSSS IR A+  G ++
Sbjct: 127 IEGPNFFFGRDRAGNTTRLKELAAERQIDVEIVVPSVRDE--RMVSSSRIREAIASGDIV 184

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY---AIRFRTQDQTS 237
            A  +LG R+ +   V  GE+ GRTLGFPTAN+     +L + GVY   A        ++
Sbjct: 185 LANQMLGSRYRLTGVVTTGEQRGRTLGFPTANLGGVTTLLPEHGVYAALACGDECDGPSN 244

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +    + G NPT        +E+ + D+  ++YG+  +++    +R  IKF D   LK  
Sbjct: 245 HPAAVHIGPNPTFNERQETKIEAHLLDYDGDLYGKSLSLTLVSQVRGVIKFADASALKQQ 304

Query: 298 MGEDEKKARK 307
           +  D +  R+
Sbjct: 305 LQIDLQTVRE 314


>gi|282848834|ref|ZP_06258227.1| riboflavin biosynthesis protein RibF [Veillonella parvula ATCC
           17745]
 gi|294791744|ref|ZP_06756892.1| riboflavin biosynthesis protein RibF [Veillonella sp. 6_1_27]
 gi|294793605|ref|ZP_06758742.1| riboflavin biosynthesis protein RibF [Veillonella sp. 3_1_44]
 gi|282581488|gb|EFB86878.1| riboflavin biosynthesis protein RibF [Veillonella parvula ATCC
           17745]
 gi|294455175|gb|EFG23547.1| riboflavin biosynthesis protein RibF [Veillonella sp. 3_1_44]
 gi|294456974|gb|EFG25336.1| riboflavin biosynthesis protein RibF [Veillonella sp. 6_1_27]
          Length = 310

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 95/316 (30%), Positives = 162/316 (51%), Gaps = 10/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M   H+ +  + + +     V A+G FDGIH GH  ++ +A++  I+ +    +++F  H
Sbjct: 1   MKQLHSFDELRQIKDTK---VYALGTFDGIHRGHQRVIHKAVEEAISVDGVSIIITFEHH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI+        +    I + +LE++    ++R   T      +A++F+ ++  + + V
Sbjct: 58  PLTILHPERVPKRVIQEEIMDTVLEELKVDYILRLPMTEALLKMTADEFLHELCND-MNV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL-RNNKSQIVSSSNIRTALTKG 177
           + ++ G  F FG    G+   +++         +    L  +  S  +SS+ IR A+ +G
Sbjct: 117 EAIVIGENFTFGAKGLGNPEYMKQVVADKNIRVLVQPLLPCDGSSTPISSTEIRKAIHEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
           H+ +A H LG  F  +  VI G++ GRTLGFPT N+ L  ++    +GVYA R    D  
Sbjct: 177 HLEDANHWLGRPFQFKGTVIKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANR-VCIDGI 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y GV N G NPT   N     E  +F+F Q+IYG+   V F  Y+R E+KF +++ L  
Sbjct: 236 WYDGVGNIGDNPTFR-NQYHRCEVHVFNFDQDIYGKEVIVQFISYIRGEVKFNNLQDLID 294

Query: 297 YMGEDEKKARKILESS 312
            M  DE++A  IL ++
Sbjct: 295 QMKVDEEQALAILANA 310


>gi|166366409|ref|YP_001658682.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
 gi|166088782|dbj|BAG03490.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
          Length = 283

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 94/288 (32%), Positives = 150/288 (52%), Gaps = 6/288 (2%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +HLGH  +L+   +     P TV+SF PHPR           L+P   + ++LE +G   
Sbjct: 1   MHLGHQTVLQPIFQDEPAYP-TVVSFTPHPREFFTGEKW-QLLTPLGEKVEVLENLGVKQ 58

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           L+   F+ E A+ +   F++++LVE L+ K++  G  F FG  R G    L +   ++  
Sbjct: 59  LVLLPFSAELASLTPLAFVEQILVEKLQAKSISVGQDFHFGYRRQGTAEDLLQIASQFNI 118

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
               +  L+N  +  +SSS IR AL  G+V  A  +LG  +++   V+ G+++GRTLGF 
Sbjct: 119 KVEIVG-LKNCGAGRISSSLIRQALAAGNVEQAGQMLGRPYSLTGRVVVGQQLGRTLGFH 177

Query: 210 TANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE 268
           TAN+Q+ PD LL + GVY       D +    V N G  PT+     + +E  + D+S  
Sbjct: 178 TANLQVPPDKLLPQFGVYCGW-VPLDGSRLPAVMNIGYRPTI-EGKTVSVEIHLLDWSGH 235

Query: 269 IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           +Y +  T+    +LRPE KF  +++LK  +  D  ++R IL S    S
Sbjct: 236 VYDRILTMDLVQFLRPEQKFNSLDRLKNQIEIDCDRSRLILTSVTDNS 283


>gi|289428756|ref|ZP_06430439.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J165]
 gi|289158154|gb|EFD06374.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J165]
          Length = 361

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 58  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 115

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+++V +  L+ + V+ G
Sbjct: 116 PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVG 174

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 175 QNFRFGRHAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 230

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR---TQDQT-SYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA         D      
Sbjct: 231 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 290

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG   TV+F + LR +IKF  IE L   M
Sbjct: 291 SAISVGTNPTFDGV-ERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQM 349

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 350 ADDVETAKRVLS 361


>gi|269120797|ref|YP_003308974.1| riboflavin biosynthesis protein RibF [Sebaldella termitidis ATCC
           33386]
 gi|268614675|gb|ACZ09043.1| riboflavin biosynthesis protein RibF [Sebaldella termitidis ATCC
           33386]
          Length = 314

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 172/325 (52%), Gaps = 14/325 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+ N       +  ++ +GNFDGIHLGH  ++++ I+ +        + +F  H
Sbjct: 1   MKI---IDKNNISELKKQKNIIILGNFDGIHLGHQELIKRGIECSEDTEYKTVLYTFKTH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                 ++  I  L+    +  +L+K     +   +F  E  N S E+FIQK++++ L  
Sbjct: 58  ------TNQNIKLLTNNEEKILLLKKFNLDYVYFEEFD-EVKNLSPEEFIQKIIIDRLHS 110

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             VI G  F F K+++G+  +L+K G++     V ID +++   +++SS+ +R  +  G+
Sbjct: 111 DKVICGFDFTFSKNKSGNTDLLKKLGQEKNVKVVVIDSVKDESGEVISSTRVRKYIEDGN 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTS 237
           +  A  LLG+   I  +V+HG+K+ R +GFPTAN+     +    GVY +  +   D   
Sbjct: 171 LSEATKLLGHYPIIAGEVVHGKKMARQMGFPTANLIFENKVYPPFGVYGVYVKIEGDNNI 230

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+GV N G+NPT+ P G L +E  I +F + IYG++  +   + +  EIKF  I++L   
Sbjct: 231 YNGVMNLGKNPTLKP-GELSVEVHILNFDKFIYGEKIIIYVLEKISDEIKFNGIDQLVEK 289

Query: 298 MGEDEKKARKILESSYPLSERDRII 322
           +G D K  +K ++  Y  +++ R  
Sbjct: 290 IGNDVKYWKKKVKDEYGNTDKTRKF 314


>gi|188590456|ref|YP_001920622.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188500737|gb|ACD53873.1| riboflavin biosynthesis protein RibF [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 308

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 94/289 (32%), Positives = 154/289 (53%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H+GH  ++++ I+IA   N    V +F  HPR  I  ++ +  L     + 
Sbjct: 18  VALGSFDGLHIGHLSLIDEVIRIARKNNGKSMVFTFKNHPRKFINPNNTLKLLMENDDKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE  G        F  E    + ++FI+ + V  L +K ++ G  ++FG    GD  +
Sbjct: 78  KMLEDKGIDIAYFANFNEEFMKITPKEFIKFLCVN-LNIKGIVVGFNYKFGYKNLGDTKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +KYG+    +D     K +++SS+ IR  L  G+V  A+ +L   + I+ +++HG
Sbjct: 137 LKELQKKYGYELHVMDS-CTYKDEVISSTRIRRELEAGNVSEASIMLNRPYFIKGEIVHG 195

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            +IGR +GFPTAN++ + D IL K GVY    R  +   Y G+ N G NPT+     + L
Sbjct: 196 REIGRIMGFPTANLKYNKDTILPKIGVYYTNVRVNN-KIYRGITNIGNNPTVN-GKEITL 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ I DF  +IYG    V F   +R + KF  ++ L   +  +   A K
Sbjct: 254 ETNILDFDNDIYGNTIEVYFIKKIRDQKKFDSVDDLVNELKNNRLSAEK 302


>gi|104774201|ref|YP_619181.1| riboflavin kinase / FAD synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423282|emb|CAI98117.1| Riboflavin kinase / FAD synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 312

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+PP  +   + K+G   L+  KFT E ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNPPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPSFAKGRFDIKVV---PKQIFAGEKIGSAEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D +
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-S 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L  
Sbjct: 235 WYQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  ++    S
Sbjct: 295 QLKLDQVASKNYFSS 309


>gi|226356759|ref|YP_002786499.1| riboflavin biosynthesis protein ribF [Deinococcus deserti VCD115]
 gi|226318749|gb|ACO46745.1| putative Riboflavin biosynthesis protein ribF [Deinococcus deserti
           VCD115]
          Length = 299

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 13/293 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            VVAIG+FDG+HLGH  ++ Q  A    +  P  V +F+P  R + Q    +  LS    
Sbjct: 15  TVVAIGSFDGVHLGHQALIAQLKARARRHRVPSVVYTFDPPTRVLTQG---VEFLSTLPE 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L++ G    +   FT E A    + F++ + +  L  +T++ G  F FG+ RAG  
Sbjct: 72  KLDLLDRYGVDETVAVSFTTEFAARPKDAFLEDLRL--LRPRTIVVGEDFHFGRGRAGSV 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+    +     V +  +     + + S+ +R  L  G V  A  LLG R+  +  V+
Sbjct: 130 EDLRLVAPE-----VLVVPIHGLSGEDIKSTRVREYLRAGDVAGARRLLGRRYEAQGVVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+++GRTLG+PTAN+Q+     L  GV+A+    +   ++ G+AN G  PT+  +    
Sbjct: 185 EGDQLGRTLGWPTANIQVPEGKALPLGVFAVTVAGEGLDAWPGMANVGFRPTVNGH-ERR 243

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            E  +FD+  ++YGQ   V F+ +LR E KF  ++ LK  +  D + AR  L 
Sbjct: 244 FEVHLFDYQDDLYGQELQVKFYTHLRGEQKFSGLDALKAQLVLDAQAARTALA 296


>gi|32475289|ref|NP_868283.1| riboflavin kinase (FAD synthetase) [Rhodopirellula baltica SH 1]
 gi|32445830|emb|CAD78561.1| probable riboflavin kinase (FAD synthetase) [Rhodopirellula baltica
           SH 1]
          Length = 323

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 8/310 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRT 61
             ++  +  L   L+GG V+IGNFDG+HLGH  +LE+              +  +PHP +
Sbjct: 7   LSDLAGDSDLHLSLQGGAVSIGNFDGVHLGHRALLERVRWHAQRVGGKAIAIVMDPHPAS 66

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +++      +L+  S + +++   G   L+  + T +  N +AE+F Q+++VE L  K +
Sbjct: 67  VLRPHGAPPSLTSLSRRAELMSGSGIDHLLVCEATRDFLNQTAEEFFQRLIVEQLSAKAI 126

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           I G  F FG+DRAG+   L++   +      + +  +R+   ++VSSS IR A+  G ++
Sbjct: 127 IEGPNFFFGRDRAGNTTRLKELAAERQIDVEIVVPSVRDE--RMVSSSRIREAIASGDIV 184

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY---AIRFRTQDQTS 237
            A  +LG R+ +   V  GE+ GRTLGFPTAN+     +L + GVY   A        T+
Sbjct: 185 LANQMLGSRYRLTGVVTTGEQRGRTLGFPTANLGGVTTLLPEHGVYAALACGDECDGPTN 244

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +    + G NPT        +E+ + D+  ++YG+  +++    +R  IKF D   LK  
Sbjct: 245 HPAAVHIGPNPTFNERQETKIEAHLLDYDGDLYGKSLSLTLVSQVRGVIKFADASALKQQ 304

Query: 298 MGEDEKKARK 307
           +  D +  R+
Sbjct: 305 LQIDLQTVRE 314


>gi|116618445|ref|YP_818816.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097292|gb|ABJ62443.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 316

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 9/318 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M +   I ++  + +  K    VVA+G FDG+H GH  +L +A         P+ VL+++
Sbjct: 1   MTMTELIRLHYPILDFKKPVQQVVAMGFFDGVHRGHQAVLARAKAEAEKQGVPLAVLTYD 60

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP    Q+   P+  L+P + ++ I+ ++G   +   +FT + A    +QF+ +V V  
Sbjct: 61  PHPIVAFQTLKKPLRYLTPLAKKKSIMRQLGVDRVYVMQFTSKLAKLGGQQFVDEV-VMQ 119

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L   TV+ G    +G        +         F  + + E  ++ +Q VSSS IR+ L 
Sbjct: 120 LNPVTVVAGFDHLYGAAGTDSDMLHLATYATNRFDVITVSEF-DDYNQKVSSSTIRSMLD 178

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
           +G+V  AA  LG   +    V+HGE  GR LGFPTAN+Q   +  L   G+YA++ +  D
Sbjct: 179 QGNVDGAAQQLGRVHSTSGIVVHGEARGRELGFPTANIQTPEEEWLPGIGIYAVKIKVYD 238

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            T Y G+A+ GRN T     P+ +E  I D+ +EIYG+   + +  YLR E+KF++++ L
Sbjct: 239 -TWYLGMASIGRNVTFGDARPITVEINILDYQEEIYGEFVQIQWCHYLRGEVKFENVQAL 297

Query: 295 KIYMGEDEKKARKILESS 312
              + ED ++ R    + 
Sbjct: 298 IDQLNEDARQTRHYFNTK 315


>gi|312898342|ref|ZP_07757732.1| riboflavin biosynthesis protein RibF [Megasphaera micronuciformis
           F0359]
 gi|310620261|gb|EFQ03831.1| riboflavin biosynthesis protein RibF [Megasphaera micronuciformis
           F0359]
          Length = 310

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 11/309 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M+V+ ++E         +  V+A+G FDG+H+GH  ++E A+        P  VL+F+ H
Sbjct: 1   MNVYDSLEAA----AVCRHAVIALGTFDGVHVGHRRVMETAMSEGKRLHVPTLVLTFSAH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P +++        L+    +E+ +  +G   LI    T E  N S E F   + +++L  
Sbjct: 57  PLSVLNPLKEPARLATVEQKEEYIRSVGIDGLIMLPMTQELLNQSPEDFCACL-IKYLAP 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-VSSSNIRTALTKG 177
             ++ GT F +GK  AG+   L +           +D +   +S   VSS+ IR  + KG
Sbjct: 116 SEIVVGTNFTYGKKAAGNTETLVQSMGDAHIPVRVLDLVEAPQSDYPVSSTVIRGLIAKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
            +  A  LLG  F + ++V+ G++ GRT+GFPTANM + P   L  +GVY +     D  
Sbjct: 176 EMQEAMTLLGRPFELRAEVVSGDRRGRTIGFPTANMLIPPKAALPPDGVY-VTGVVLDGK 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + N G NPT        +E+ I D+S +IYG+  T+ F+  LR E KF  I +L  
Sbjct: 235 EWPAMTNIGNNPTF-TRQYRRVETHILDWSGDIYGKTVTLRFYKRLRDEKKFSSITELVD 293

Query: 297 YMGEDEKKA 305
            M  D+KK 
Sbjct: 294 AMKVDKKKV 302


>gi|304316858|ref|YP_003852003.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778360|gb|ADL68919.1| riboflavin biosynthesis protein RibF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 310

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 6/303 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I    ++  +    V+A+GNFDGIHLGH  ++++AI+++       +  +F  H    I 
Sbjct: 3   ILDEYNIKKYNDKKVIALGNFDGIHLGHQELIKKAIELSKVNKISSSAFTFRQHTMKTIC 62

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            +     L     + +   K      I Y F  + +  S E FI+ +L++ L +K  I G
Sbjct: 63  ENKFPKLLITNRKKLEEFSKFMLDYAIIYDFNKDFSLLSPENFIKDILIDKLNMKIAIVG 122

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             +RFG   +GD  +L+   + Y +    I+ ++ N+   +SSS IR+ + +G +  A  
Sbjct: 123 ENYRFGYRASGDIQLLKSFSKIYDYKVEVIEPVKLNEIV-ISSSYIRSLIQEGKIEEANK 181

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVAN 243
            LG  F++E  VI G K+GR LGFPTAN+ +  D IL   GVY  + +  +   + G+ N
Sbjct: 182 CLGRYFSLEGYVISGRKVGRKLGFPTANISIDRDYILPLNGVYLTKVKILN-KYFLGITN 240

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT   N  L +E++I DF++ IYG    V F   +R EIKF   E+L   M ED  
Sbjct: 241 VGINPTFNVNN-LSVETYIIDFNKNIYGMFIEVEFIKRIRDEIKFNSEEELIEQMKEDYI 299

Query: 304 KAR 306
            A+
Sbjct: 300 FAK 302


>gi|302670334|ref|YP_003830294.1| riboflavin biosynthesis protein RibF [Butyrivibrio proteoclasticus
           B316]
 gi|302394807|gb|ADL33712.1| riboflavin biosynthesis protein RibF [Butyrivibrio proteoclasticus
           B316]
          Length = 308

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 9/306 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHP 59
           M +   ++      N      +AIG FDGIHLGH  +L   + +  +    TV +F P P
Sbjct: 7   MQIITRLDEL----NINDKTAIAIGKFDGIHLGHKKLLNLILDQKQDGLKATVFTFEPSP 62

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                   P+  L     + K  + MG   L+ +    ETA    E F++ +LVE L+  
Sbjct: 63  EEFFVG-HPVKQLFTRKEKRKAFQDMGIDILVEFPLNAETAATPPEDFVKTILVEDLKAD 121

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  G    FG    GD+ +L+   ++ GF    ID++  +  + VSS+ +R  +  G++
Sbjct: 122 YIAAGCDVSFGDKGRGDQHLLRNMSKELGFELCLIDKVMLDGDE-VSSTRVRNQIADGNI 180

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
             A  LLG  ++I   V HG  +G T+G PT N+      +L   GVY       D+  Y
Sbjct: 181 PMAKRLLGNDYSISGIVEHGRHLGHTIGIPTVNIMPPAGKLLPPFGVY-SSTVVIDEVEY 239

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+ N GR PT+  +  + +E++I+DF  ++YG+   V   ++ RPE+KF  +++LK  M
Sbjct: 240 HGMTNIGRKPTVSNDNQVGVETYIYDFDADVYGKSIEVKLLEFKRPEMKFASVDELKAQM 299

Query: 299 GEDEKK 304
             D + 
Sbjct: 300 TRDIEN 305


>gi|239944695|ref|ZP_04696632.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
          Length = 288

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 92/285 (32%), Positives = 138/285 (48%), Gaps = 12/285 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K VI G  FRFG   AG+  +L + G  Y +    ID          Q  SS+  R  + 
Sbjct: 118 KAVIEGPNFRFGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D
Sbjct: 178 EGDVAGAAEILGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-D 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
             S     + G NP         +E++  D    ++YG    V F
Sbjct: 237 GESMPAAISVGTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDF 280


>gi|325125982|gb|ADY85312.1| Riboflavin kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 312

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQAFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPSFAKGRFDIKVV---PKQIFAGEKIGSAEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D +
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-S 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L  
Sbjct: 235 WYQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  ++    S
Sbjct: 295 QLKLDQVASKNYFSS 309


>gi|323466343|gb|ADX70030.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           helveticus H10]
          Length = 320

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 7/296 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             ++A+G FDG+HLGH  ++ +A +I      P+ VL+F+ HP+ I         L    
Sbjct: 23  KTILALGFFDGVHLGHQRLINKAKEIADQKRLPLVVLTFDRHPKEIYADKKDFKYLKTLD 82

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + ++G   L    FT + +    + F+  V++  L   TV+ G  + +G     +
Sbjct: 83  EKADKMAELGVDYLAVMPFTKKFSEIDTQSFVDNVII-KLNADTVVAGFDYTYGPKETAN 141

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L K  +   F  V + + +    + + S+ IR A+ +G +  A  L+G+ + +   V
Sbjct: 142 MKNLPKFAKGR-FEIVVMPK-QIFNGKKIGSTEIRQAIREGKMDLAFQLMGHHYVMSGTV 199

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG++ G  LGFPTAN+   S  ++ K GVYA + +      Y  + + G N T+     
Sbjct: 200 GHGKRNGHKLGFPTANLVWASHKVIPKIGVYATKTQVNG-KWYESMTSVGYNVTIGQPEK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +ES IFDF ++IY Q   + ++ Y R EIKF  +++LK  + +D+ + +     
Sbjct: 259 IFIESHIFDFKEDIYDQPIKIKWYKYTRGEIKFSGLDELKKQLEKDQIEIKHYFAQ 314


>gi|117928718|ref|YP_873269.1| riboflavin kinase / FMN adenylyltransferase [Acidothermus
           cellulolyticus 11B]
 gi|117649181|gb|ABK53283.1| FMN adenylyltransferase [Acidothermus cellulolyticus 11B]
          Length = 337

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 35/340 (10%)

Query: 1   MHVFHNIEIN-----QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVL 53
           M ++    ++       L       VV+IG FDG+H GH  IL  A + A+     +  +
Sbjct: 1   MRIWRGTGLSPATELAGLRAAFPRPVVSIGVFDGVHRGHQKILAAARRHADETGRALLAV 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +F+P P  +++  +    L+  + +  +LE+     +   +FT E A  + +QF++ VL 
Sbjct: 61  TFDPIPERVLRPQAAPPLLATTARRLALLEQAQVDGVYLVEFTTEFAALTPDQFVKTVLA 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---------------- 157
           + L+   V+ G  FRFG   +GD   L     ++G+    +D L                
Sbjct: 121 DGLDASAVVVGANFRFGHRASGDVTTLTHHAGQFGYAVEAVDLLTLAVPAEPTDDAHAAA 180

Query: 158 ----RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
               R  +   VSSS IR  +  G V  AA  LG    +E +V HG++ GR+LG+PTAN+
Sbjct: 181 QDDPRPAELVTVSSSWIRQQIAAGWVARAAVALGRPHRLEGEVQHGDRRGRSLGYPTANL 240

Query: 214 QLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYG 271
            ++ D+ L  +GVYA               + G NPT        +E+++ D    + YG
Sbjct: 241 AVAGDLALPADGVYAGWLDG-----MPAAISVGTNPTF-GGTVRRVEAYVLDRDDLDYYG 294

Query: 272 QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +  TV F   +R  ++F  +++L+  M +D  + R IL +
Sbjct: 295 KSVTVDFARRIRGMVRFAQVDELRRQMDDDVARCRDILRT 334


>gi|229829168|ref|ZP_04455237.1| hypothetical protein GCWU000342_01253 [Shuttleworthia satelles DSM
           14600]
 gi|229792331|gb|EEP28445.1| hypothetical protein GCWU000342_01253 [Shuttleworthia satelles DSM
           14600]
          Length = 311

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 95/304 (31%), Positives = 161/304 (52%), Gaps = 8/304 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           ++   V +G FDG+H GH L++++  +          L+F   PR  +      F +   
Sbjct: 13  MEDSAVCVGKFDGLHRGHRLLIDKTREEETRGLVSVALTFKTSPRRFL--DQDRFNIVDN 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  + E+ G S L++++F  + A    E F+++++ + L ++T++ G  F FG   AG
Sbjct: 71  RERGMLFERTGISCLLQWEFNEKVARMEPEAFLRQLVHD-LSMRTLVVGEDFHFGYRGAG 129

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++   + GF  + I +L+    + +SSS IR  +T G +  A  LLGY F    +
Sbjct: 130 DVETLKQLASELGFRPLIIPKLKE-GGEDISSSRIRRLITGGQIEEANALLGYDFFCYGE 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++HG KIGRT+G PT N+    D +L + GVY  R       SY G+ N G  PT+    
Sbjct: 189 IVHGRKIGRTIGIPTINLSPPEDKLLPRYGVYVTR-VVMGTKSYWGMTNVGVKPTIEGRR 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK-ARKILESSY 313
              +E+++ DF  +IYG+   + F  ++R E KF+DI+ LK+ +G D+++ AR +     
Sbjct: 248 APGIETYLMDFEGDIYGREARIDFLHFVRDEKKFEDIKALKLQIGRDKEQIARYVSRHPE 307

Query: 314 PLSE 317
            LSE
Sbjct: 308 SLSE 311


>gi|33240796|ref|NP_875738.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
 gi|33238325|gb|AAQ00391.1| FAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 305

 Score =  284 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 5/293 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              +A+G+FDG+H GH  +++         P TV+SF PHPR ++   S +  L  PS +
Sbjct: 13  PTALALGSFDGLHAGHRSVIKTITSNTTAVP-TVVSFWPHPREVLYGESKL-RLYLPSEK 70

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE +G   L+   F L  A+ SA++F  ++L++ L+ K +  G  FRFGK+R GD  
Sbjct: 71  ALLLEHLGVKQLVLVPFDLSLASLSADEFFHEILIKNLQAKQISVGANFRFGKNREGDSD 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L + GEK       ++ + +N+ ++ SSS IR AL  G +     LLG  ++    V+ 
Sbjct: 131 KLIELGEKANIKVRVLEIIEDNQGRM-SSSRIREALKDGDIKLTNSLLGRAYSFGGKVVP 189

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPL 256
           G+ IGR LG+PTAN+++    LL  +GVYA+  R  D+ S+   + N G  PT+ P+ P 
Sbjct: 190 GKGIGRKLGWPTANLEIDGSKLLPGQGVYAVMTRASDEKSFSPAIMNLGPQPTINPHAPS 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             E  + +    + G+   V   + +R + KF  ++ L   +  D +KA  IL
Sbjct: 250 ATEVHVLNKQVNLKGKDLIVEPVERIRTQKKFTTLKDLSNQIELDARKAISIL 302


>gi|140910|sp|P22990|RIBF_PSEFL RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|151639|gb|AAA26021.1| protein X [Pseudomonas fluorescens]
          Length = 311

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/301 (32%), Positives = 138/301 (45%), Gaps = 8/301 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+            G   ++   F     + SA +F+ ++LV+ L V
Sbjct: 58  PREFFTPETAPARLALARQ-AATAGGEGVDRVLCLAFNQRLRSLSAAEFVDRILVDGLGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG DR GD   LQ  G   GF       +       VSS+ +R AL    
Sbjct: 117 QHLEVGDDFHFGCDRVGDFDFLQHAGVNQGFTVEAAQTV-ELDGLRVSSTQVRNALAAAD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F I   V+HG+K+ R LG PTAN+QL    +   GVY +     D  S+
Sbjct: 176 FDLAERLLGRPFRIAGRVLHGQKLARQLGTPTANVQLKRRRVPLTGVYLVSVDI-DGQSW 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT+  +G   LE  + DF+ ++Y +R TV F   LR E +F  +E LK  +
Sbjct: 235 PGVANIGVRPTVAGDGKAHLEVHLLDFAGDLYDRRLTVVFHQKLREEQRFASLEALKTAI 294

Query: 299 G 299
            
Sbjct: 295 N 295


>gi|304440005|ref|ZP_07399898.1| riboflavin biosynthesis protein RibF [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371497|gb|EFM25110.1| riboflavin biosynthesis protein RibF [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 306

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 13/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  NI++N    + +   V+A+GNFDG+HLGH L++++AI+ A+   +   VL FN H
Sbjct: 1   MKIV-NIDLNYIGKDEI---VIALGNFDGVHLGHRLLMKKAIETASKIDAHSAVLLFNEH 56

Query: 59  P-RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              T+         L+    +   L+ +G   +    F  E    S E F++  LV+ L 
Sbjct: 57  TTATLF--DHKKKELTSNEAKLMYLKGIGIDIVYMIDFNEEFMKMSPEYFVKNFLVKNLN 114

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K V+ G  +RFG    GD   L++  + Y      ID  + +  ++VSS+ IR A+++G
Sbjct: 115 AKGVVVGYDYRFGFKAMGDVESLRELCKDYNLTLDVIDAYKID-GEVVSSTRIREAISEG 173

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT-QDQ 235
            +  A  LLG+ + I   V HG+K+G  +G+PTAN+     + L  +GVY  R +   D 
Sbjct: 174 MMEEANKLLGHNYFITGIVDHGKKLGSKMGYPTANIITKDGVQLPGDGVYDTRIKVEGDD 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y    + G NPT +    L +E+ I DF + IYG++  + F   LRP + F  +E+L 
Sbjct: 234 LLYKAATSIGNNPTFLGEN-LKIEANILDFDENIYGKKVYLYFLKKLRPMVVFNSVEELF 292

Query: 296 IYMGEDEKKARK 307
             + +D ++ RK
Sbjct: 293 ERIAKDVEEVRK 304


>gi|302872109|ref|YP_003840745.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574968|gb|ADL42759.1| riboflavin biosynthesis protein RibF [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 305

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M+V+  +      P       VA+G FDG H+GH  + E     A      V +F  HP 
Sbjct: 1   MNVYEMVAKRGDTP------AVALGFFDGFHIGHKKLFEVLDANARGRKKVVFTFKNHPD 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++     I  +     + +         +   +F  +      ++FI+++L++ L V  
Sbjct: 55  NLL--GFNIKYILTNEERLEFFRNYSIDDVYFIEFNKKIMQMDKDRFIEEILIDKLNVSV 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG    GD   L ++  ++G   + ID +   +  IVSS+ IR  + +G++ 
Sbjct: 113 VVVGYDFTFGYMAEGDSKYLCEKLHQFGRKCIVIDPVMY-QEHIVSSTLIRRLILEGNIK 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYS 239
            A  +LG+ F I   V  G ++G+ +GFPT N++   + I+ ++GVY       D   Y 
Sbjct: 172 LANCMLGFNFFINGTVKRGNRLGKKIGFPTINIKFDKEKIVPRKGVYIT-NTIIDDKRYL 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G NPT+  +  + +E+ I    + +YG+R  + F D++R E KF +I++LK  + 
Sbjct: 231 SITNVGTNPTVSASENIKIETHILSVDKNMYGKRVKIEFIDFVREEKKFSNIDELKNQIA 290

Query: 300 EDEKKARKIL 309
           +D +  + + 
Sbjct: 291 KDVEYVKTLF 300


>gi|34540709|ref|NP_905188.1| riboflavin biosynthesis protein RibF [Porphyromonas gingivalis W83]
 gi|34397023|gb|AAQ66087.1| riboflavin biosynthesis protein RibF [Porphyromonas gingivalis W83]
          Length = 323

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 6/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDGIH GH  +L+Q  K+A     P  V++F+  P ++++  +P   L+    +
Sbjct: 24  AATIGTFDGIHFGHRFLLDQLKKMAKEKHLPTMVITFDVPPISVVRPGTPYQKLTTIGEK 83

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LE  G    +   FT E    +A+ FI  +L + L VK ++ G   RFG  R     
Sbjct: 84  LLRLEAEGVDYTVVLPFTPELVAMTADTFITTILHKRLHVKALLIGYDHRFGHGRISGLE 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++     G  TV             SSS +R AL   ++  A  LLGY + +   V H
Sbjct: 144 EYKQIATPLGI-TVKKASQAEIGGVPASSSAVRQALIDNNLALANQLLGYDYILTGKVEH 202

Query: 199 GEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G +IGR LGFPTAN+ +  S  ++  +GVYA+R        Y+G+   GR PT+      
Sbjct: 203 GFRIGRELGFPTANLTVSDSHKLIPCDGVYAVRAIVSG-ERYNGMLYIGRRPTLNNGDQR 261

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +E  +F+F + IYG +  V F  ++R ++KF  +E L+  +  D  +   + ES  
Sbjct: 262 TIEVNLFEFDKTIYGSQIRVEFVSFIREDMKFDSLEALRQQIQADYGRISALFESEQ 318


>gi|118602076|ref|YP_903291.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567015|gb|ABL01820.1| FMN adenylyltransferase / riboflavin kinase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 300

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/311 (34%), Positives = 158/311 (50%), Gaps = 15/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +   Q+L +H  G VV IGNFDG+H+GH  I++  +K A   N P  ++SF+P 
Sbjct: 1   MKLIRGL---QNLKSHF-GSVVTIGNFDGVHIGHQKIIKTLVKKAQIMNLPSVLISFSPT 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+          TLS    +  +L  +G    +   F    +  SA+ FIQ++L++ L +
Sbjct: 57  PQHFFGHMQA--TLSSFKQKHALLTNLGLEEYLLINFNTPFSQLSADAFIQQILLKKLNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K  I G  FRFG +R GD  +LQ     + F       + +N    VSSS IR +L KG 
Sbjct: 115 KHCIVGDDFRFGANRTGDFSLLQT----FDFEVEKTPTVLHNF-HRVSSSKIRQSLKKGD 169

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG  F+I   +IHG+K GR + FPT N+ +   I    GV+A+         Y
Sbjct: 170 FNLANQLLGREFSISGKIIHGQKQGRAIDFPTINILIKRKISPLLGVFAVNVELNG-KIY 228

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +GV N G+ PT+     +LLE+F+FDF+ +IYG+     F   +R E KF     LK  +
Sbjct: 229 NGVCNLGKRPTI-GGEIILLEAFLFDFNSQIYGENAKTVFKYKIRDEQKFDSFSALKRQI 287

Query: 299 GEDEKKARKIL 309
             D K A+   
Sbjct: 288 KSDVKDAKNFF 298


>gi|116514291|ref|YP_813197.1| FAD synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|116093606|gb|ABJ58759.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 313

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+ P  +   + K+G   L+  KFT E ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPEFSHLAPQTFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPAFAKGRFDIKVV---PKQIFAGEKIGSAEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D +
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-S 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L  
Sbjct: 235 WYQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  ++    S
Sbjct: 295 QLKLDQVASKNYFSS 309


>gi|295426202|ref|ZP_06818864.1| riboflavin biosynthesis protein RibF [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064111|gb|EFG55057.1| riboflavin biosynthesis protein RibF [Lactobacillus amylolyticus
           DSM 11664]
          Length = 313

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 7/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+HLGH  ++  A  I    + P+ V++F+ HP  +         +     +
Sbjct: 20  VLALGFFDGVHLGHQHLINVAKNIAEEKHLPLAVMTFDRHPVEVYADDHAFQYIDTVDEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + K+G    +  KFT + +  S + F+  VLV  L  +TV+ G  + +G     +  
Sbjct: 80  AEKMAKLGVDYFLVMKFTKQFSQISGQDFVDHVLV-ALNAETVVAGFDYTYGPKDVANMD 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L    +K  F  V + + +    + + S+ IR A+ +G +  A  LLG+ + +   + H
Sbjct: 139 NLPVFAKKR-FEIVKVPK-QTFDGKKIGSTEIRKAINEGKMELAYDLLGHHYVMSGIIGH 196

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ G  LGFPTAN+       + K GVYA R +   Q  Y  + + G N T+     + 
Sbjct: 197 GKRNGHKLGFPTANLVWQNKKAIPKIGVYATRTKVNGQ-WYESMTSVGYNVTIGQEKRIY 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +ES IFDF +++YG+   + ++ Y R EIKF  +  LK  + +D+   +    +
Sbjct: 256 IESNIFDFDEDVYGKPMEIKWYKYTRGEIKFDSLAALKEQLKKDQTGIKAYFAN 309


>gi|71082865|ref|YP_265584.1| riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71061978|gb|AAZ20981.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 305

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ +     ++ N+ K  ++ IGNFDG+HLGH  + + A       N  I VL+F P 
Sbjct: 1   MKLYKDF----NISNNHKKSIILIGNFDGVHLGHQKLFKLANTYKKKFNLKIGVLTFEPM 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     +   F +S  + ++ IL+ +G   +I  KF  + +   ++ FI+++L + LE 
Sbjct: 57  PKMFFNKNFKNFRISNINQKKIILDHLGVDFIITKKFDKKFSAIKSDFFIKEILSKKLEA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +     FRFG  R GD   L K   +Y +  V    L  NK   +SS+ IR+ L KG 
Sbjct: 117 QYIFVSNNFRFGNKREGDVRQLIKNEGRYHYKIVKPQPLILNKKV-ISSTYIRSLLEKGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTS 237
           +     LL   ++IE  V  G + G+ +GFPT N+ +   ++   GVYA++ + ++   S
Sbjct: 176 LKKTNKLLSRNWSIEGIVQKGRQQGKKIGFPTCNIDIKDYVIAMPGVYAVKVKQKNSNKS 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              +AN G  PT      +LLE  IF+FS  +Y +  +V F  ++R E KFK++++LK  
Sbjct: 236 LKAIANLGYRPTFNQ-KKILLEVHIFNFSGNLYNKYLSVEFTKFIRKEKKFKNVDQLKKQ 294

Query: 298 MGEDEKKARK 307
           +  D K A+K
Sbjct: 295 IQSDLKVAKK 304


>gi|91762712|ref|ZP_01264677.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718514|gb|EAS85164.1| Riboflavin biosynthesis protein [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 305

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 99/310 (31%), Positives = 163/310 (52%), Gaps = 9/310 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ +     ++ N+ K  ++ IGNFDG+HLGH  + + A       N  I VL+F P 
Sbjct: 1   MKLYKDF----NISNNHKKSIILIGNFDGVHLGHQKLFKLANTYKKKFNLKIGVLTFEPM 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+     S   F +S  + ++ IL+ +G   +I  KF  + +   ++ FI+++L + LE 
Sbjct: 57  PKMFFNKSFKNFRISNINQKKIILDHLGVDFIITKKFDKKFSAIKSDFFIKEILSKKLEA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +     FRFG  R GD   L K   +Y +  V    L  NK   +SS+ IR+ L KG 
Sbjct: 117 QYIFVSNNFRFGNKREGDVRQLIKNEGRYHYKIVKPQPLILNKKV-ISSTYIRSLLEKGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTS 237
           +     LL   ++IE  V  G + G+ +GFPT N+ +   ++   GVYA++ + ++   S
Sbjct: 176 LKKTNKLLSRNWSIEGIVQKGRQQGKKIGFPTCNIDIKDYVIAMPGVYAVKVKQKNSNKS 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
              +AN G  PT      +LLE  IF+FS  +Y +  +V F  ++R E KFK++++LK  
Sbjct: 236 LKAIANLGYRPTFNQ-KKILLEVHIFNFSGNLYNKYLSVEFTKFIRKEKKFKNVDQLKKQ 294

Query: 298 MGEDEKKARK 307
           +  D K A+K
Sbjct: 295 IQSDLKVAKK 304


>gi|2289231|gb|AAB64408.1| macrolide-efflux protein [Streptococcus agalactiae]
          Length = 311

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H I   + +    +  V+ +G FDG+HLGH  + ++A KI    N  I VL+FN  
Sbjct: 2   MKI-HYINDYKDIQAK-EDCVLVLGYFDGLHLGHKALFDKAKKIATEKNLKIVVLTFNET 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR       P  +  L+ P  + +  ++ G   L    FT   +  S++ FI+K  +  L
Sbjct: 60  PRLTFARFQPELLLHLTSPEKRSEKFQEYGVDELYLMNFTSHFSKVSSDLFIKKY-IYGL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  + G  ++FG +R             +      IDE+ +   + +SS+ IR  +T+
Sbjct: 119 RAKAAVVGFDYKFGHNRTSG----DYLARNFKGPVYIIDEI-SEGGEKISSTRIRQLITE 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLGY F+    V+HG+  GRT+GFPTAN+  ++   L  +GVY         
Sbjct: 174 GNVEKANQLLGYEFSTCGMVVHGDARGRTIGFPTANLAPINRTYLPADGVYISNVLING- 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   + +   +R  +KF  I+ L 
Sbjct: 233 KYYRAMTSIGKNITF-GGTELRLEANIFDFDGDIYGETIEIFWLKRIREMVKFNGIDDLV 291

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D++ A    + S  L
Sbjct: 292 KQLKKDKEIALNWKKDSQTL 311


>gi|22537157|ref|NP_688008.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae 2603V/R]
 gi|25011086|ref|NP_735481.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae NEM316]
 gi|76787231|ref|YP_329713.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae A909]
 gi|77405709|ref|ZP_00782796.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           H36B]
 gi|77409669|ref|ZP_00786338.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           COH1]
 gi|77411998|ref|ZP_00788327.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           CJB111]
 gi|77414762|ref|ZP_00790888.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae 515]
 gi|22534020|gb|AAM99880.1|AE014237_14 macrolide-efflux protein mreA/riboflavin biosynthesis protein RibF
           [Streptococcus agalactiae 2603V/R]
 gi|23095485|emb|CAD46691.1| macrolide-efflux protein [Streptococcus agalactiae NEM316]
 gi|76562288|gb|ABA44872.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           A909]
 gi|77159192|gb|EAO70377.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae 515]
 gi|77161954|gb|EAO72936.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           CJB111]
 gi|77171719|gb|EAO74919.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           COH1]
 gi|77175705|gb|EAO78487.1| riboflavin biosynthesis protein RibF [Streptococcus agalactiae
           H36B]
 gi|319745004|gb|EFV97332.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus agalactiae ATCC 13813]
          Length = 310

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 15/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H I   + +    +  V+ +G FDG+HLGH  + ++A KI    N  I VL+FN  
Sbjct: 1   MKI-HYINDYKDIQAK-EDCVLVLGYFDGLHLGHKALFDKAKKIATEKNLKIVVLTFNET 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR       P  +  L+ P  + +  ++ G   L    FT   +  S++ FI+K  +  L
Sbjct: 59  PRLTFARFQPELLLHLTSPEKRSEKFQEYGVDELYLMNFTSHFSKVSSDLFIKKY-IYGL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K  + G  ++FG +R             +      IDE+ +   + +SS+ IR  +T+
Sbjct: 118 RAKAAVVGFDYKFGHNRTSG----DYLARNFKGPVYIIDEI-SEGGEKISSTRIRQLITE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLGY F+    V+HG+  GRT+GFPTAN+  ++   L  +GVY         
Sbjct: 173 GNVEKANQLLGYEFSTCGMVVHGDARGRTIGFPTANLAPINRTYLPADGVYISNVLING- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   + +   +R  +KF  I+ L 
Sbjct: 232 KYYRAMTSIGKNITF-GGTELRLEANIFDFDGDIYGETIEIFWLKRIREMVKFNGIDDLV 290

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D++ A    + S  L
Sbjct: 291 KQLKKDKEIALNWKKDSQTL 310


>gi|293606193|ref|ZP_06688556.1| riboflavin biosynthesis protein RibF [Achromobacter piechaudii ATCC
           43553]
 gi|292815340|gb|EFF74458.1| riboflavin biosynthesis protein RibF [Achromobacter piechaudii ATCC
           43553]
          Length = 285

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/281 (31%), Positives = 144/281 (51%), Gaps = 7/281 (2%)

Query: 37  ILEQAIKIANNSPIT--VLSFNPHPRTII-----QSSSPIFTLSPPSIQEKILEKMGFSA 89
           +L +  + A    +   V++F PHPR        +       +S    +   L + G S 
Sbjct: 1   MLARVCQAARERGLVPSVMTFEPHPREYFATLNHRPELAPTRVSGLRDKLSALARYGVSQ 60

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           ++  +F    A  SA  FI+ +LV+ L+ K ++ G  FRFG  R+GD  +L++ G  +GF
Sbjct: 61  VVVQRFNARLAEMSANAFIETLLVQGLQTKWLLVGEDFRFGHKRSGDIDLLREAGMHHGF 120

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
               + ++ + +   +SSS +RTAL  G +  A HLLG+ + I   VIHG+K+GRTLG+P
Sbjct: 121 EVQTLADVTDQQGHRISSSEVRTALAVGDLDRARHLLGHPYHISGHVIHGQKLGRTLGYP 180

Query: 210 TANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI 269
           T N++++     + G+Y ++           VA+ G  PT+   G +LLES + D + + 
Sbjct: 181 TMNLRVAERCAARSGIYVVQVHGLADRPLPAVASLGVRPTVEDRGRVLLESHLLDDTVDA 240

Query: 270 YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           YG+   V F   LR E KF D+  L   + ED + AR    
Sbjct: 241 YGKLVRVEFLHKLRDEEKFPDLPSLTAAIAEDARNARAYFA 281


>gi|313895694|ref|ZP_07829250.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320528962|ref|ZP_08030054.1| riboflavin biosynthesis protein RibF [Selenomonas artemidis F0399]
 gi|312975820|gb|EFR41279.1| riboflavin biosynthesis protein RibF [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320138592|gb|EFW30482.1| riboflavin biosynthesis protein RibF [Selenomonas artemidis F0399]
          Length = 319

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 7/300 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDGIHLGH  I++ A++ A        V SF  HPR ++        +    ++
Sbjct: 18  VMALGMFDGIHLGHQRIVKTAVRRAREIGGTALVFSFLNHPRAVVDPQRSPRLIGSDVLR 77

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KILE++G   L+   FT   A   A  F+  +L ++   + V+ G  + FG+   G   
Sbjct: 78  RKILERLGVDVLVEIPFTPNFAKTDAADFVA-LLHQYCAPQYVVIGENYTFGRFGRGTPD 136

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           ++++  ++YGF  +  + +     + +SS+ IR  + +G +      LGY F+I   V+H
Sbjct: 137 LMRQEAKRYGFRALVCNPV-IRDGEPISSTRIRGLIQQGEIAKVNEYLGYPFSIIGTVVH 195

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           GE  GR LGFPTAN++L  +   L  GVYA+         Y+GVAN G NPT        
Sbjct: 196 GEARGRLLGFPTANIELQDENESLPNGVYAVTVA-HGAEQYAGVANIGNNPTF-GGCRRR 253

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           LE  IFD S+++YG R TVSF   +R E +F   E+LK  +  D+K +  ++   + L E
Sbjct: 254 LEVHIFDISKDLYGDRLTVSFHARIREERRFSSAEELKAQIERDKKTSISVIAEIFHLQE 313


>gi|282881173|ref|ZP_06289860.1| riboflavin biosynthesis protein RibF [Prevotella timonensis CRIS
           5C-B1]
 gi|281304977|gb|EFA97050.1| riboflavin biosynthesis protein RibF [Prevotella timonensis CRIS
           5C-B1]
          Length = 316

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 8/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V  IG FDG+H GH  ++ + ++ A  +  P  V++F+ HPR ++Q       L+  
Sbjct: 14  EPCVATIGFFDGVHRGHQYLIRKVVEKAKQAGMPSVVVTFDQHPRAVLQKDYVPELLTTN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L +     ++   FT   A  +A++F+  +L   L+V  +  G   +FG  R  
Sbjct: 74  EQKFDLLARTAVDCVVVLHFTPTMAALTAQEFMAHILHHQLKVHALFIGYDHQFGYHRRE 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                 + G++ G   +  D   ++ + + VSSS IR  + +G +  A   LGY +T+ S
Sbjct: 134 GFADYVRYGQQLGMEVIRNDAYVDDEEGKQVSSSIIRKMIREGELPLANRCLGYPYTLTS 193

Query: 195 DVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQT-SYSGVANFGRNPTMV 251
           +VI G + GR LGFPTAN+ +     +L  +GVYA++ +       Y G+ + G  PT  
Sbjct: 194 NVIGGFQEGRKLGFPTANLDIEQITQLLPAQGVYAVQAQIDKTGAWYRGMTSIGTRPTFH 253

Query: 252 PNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               L +E+ + D +   IY  + +++F++ LR E  F  ++ L+  + +D +      
Sbjct: 254 -GTSLSIETNLLDNYHANIYQHQLSIAFYERLREEKCFSGVDDLRQQLVQDAENVNMFF 311


>gi|194467751|ref|ZP_03073737.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri 100-23]
 gi|194452604|gb|EDX41502.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri 100-23]
          Length = 315

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 12/318 (3%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V   H+    + +P      V+A+G FDG+H GH  ++++A +I      P+ VL+++
Sbjct: 1   MQVIKIHHPLAKRLIPA--GPIVLAMGFFDGVHRGHQAVIKRAREIAREKGLPLVVLTYD 58

Query: 57  PHPRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             P  + +        LS  + + ++L  +    +    FT   A+ S +QF+ + LV +
Sbjct: 59  HAPGIVYRQYKGGFKYLSTVNRKLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTAL 174
              +TV+ G    +GK+      +L K      F  V + +   N S + V S  IR  +
Sbjct: 119 -HAQTVVAGFDHTYGKEDIASMKLLPKYAAGR-FEVVTVPKFTENGSQEKVGSREIRKLI 176

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
             G+V  A   LGY +     V+HG   GRTLGFPT N++    + +   GVYA++ +  
Sbjct: 177 DAGNVEAANQALGYPYQTTGLVVHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVK-L 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  Y G+A+ G N T      L +E  +FDF Q +YG+   V ++ YLR E KF   + 
Sbjct: 236 GKKWYDGMASVGHNITFGDANQLTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M +DE+ AR ILE 
Sbjct: 296 LVTQMKQDEQNARHILEK 313


>gi|332967817|gb|EGK06916.1| riboflavin biosynthesis protein RibF [Kingella kingae ATCC 23330]
          Length = 310

 Score =  283 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 15/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M ++    + QS P   +G  V IGNFDG+H GH  IL +      A N P   + F P 
Sbjct: 1   MKIW----LGQSAPYLPQGSAVTIGNFDGVHTGHRHILNRLATEAAARNLPAIAIVFEPQ 56

Query: 59  PRTIIQS---SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE 114
           P          +    LSP   + ++L +      +   +F    AN  A+ F Q VL E
Sbjct: 57  PAEFFAQQARKTAPSRLSPLRDKLQLLAQTSSLHGVWVQRFNPTFANTPADVFTQTVLRE 116

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + ++ G  FRFGK R GD  +L     +  F T     +     +  SS+ +R AL
Sbjct: 117 RLNTRYLLVGDDFRFGKARGGDFDLL---CAQSDFVTENTPSILI-AGERASSTAVRQAL 172

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G++  A  +LG+ +T+   V HG K+GRT+G PTAN+ LS      +GV+ +      
Sbjct: 173 AAGNLPRAEQILGHGYTLSGRVKHGAKLGRTIGCPTANIHLSNHAYALQGVFVVEATGA- 231

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               +GVA+FGRNPT+       LE  +FDF+ ++YG+R  + F   LR E +F D+  L
Sbjct: 232 FGRRAGVASFGRNPTVSHTPEAKLEVHLFDFAGDLYGERLHIRFLHKLRDEERFADLSSL 291

Query: 295 KIYMGEDEKKARKI 308
           +  +  D + A+  
Sbjct: 292 QTQIAADMQAAKIW 305


>gi|304383298|ref|ZP_07365764.1| riboflavin biosynthesis protein RibF [Prevotella marshii DSM 16973]
 gi|304335466|gb|EFM01730.1| riboflavin biosynthesis protein RibF [Prevotella marshii DSM 16973]
          Length = 310

 Score =  283 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 142/314 (45%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M + H    N+ +P   +  +  IG FDG+H GH  ++++  + A+       V++F+ H
Sbjct: 1   MKIIH---FNEQMPPQTRPAMATIGFFDGVHTGHRFLIDELARQAHAEKMDAMVVTFDRH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++ S      LS    + +++            FT E A  SA  F++ VL + L V
Sbjct: 58  PREVLHSDYQPRLLSSLDEKLELMTHTEADTCAVLAFTPEMAARSAFDFMRTVLRDKLCV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G   RFG +R+         G +                  VSSS IR+ L +G 
Sbjct: 118 KRLFIGYDNRFGHNRSEGFADYLAYGRRLHIDVKE-STAFTLGDIRVSSSAIRSLLNEGD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT 236
           V+ +   LGY +T+   V+ G + GR +GFPTAN+    +  ++  +GVYA+    +   
Sbjct: 177 VITSNRCLGYAYTLSGTVVGGFREGRKIGFPTANLHPFDARKLIPHDGVYAVEATVEGFD 236

Query: 237 S-YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
                + N GR PT        LE  I DF  +IY ++ +V+F   LR E  F D   L 
Sbjct: 237 RAMPAMMNIGRRPTYGS-FDRSLEVHILDFHADIYDRKMSVAFVQRLRDEQTFADPAALA 295

Query: 296 IYMGEDEKKARKIL 309
             +  DE   R +L
Sbjct: 296 AQLTRDEAATRALL 309


>gi|300865567|ref|ZP_07110346.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Oscillatoria sp. PCC 6506]
 gi|300336439|emb|CBN55496.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Oscillatoria sp. PCC 6506]
          Length = 399

 Score =  283 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 30/290 (10%)

Query: 50  ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            TV++F+PHP+    S  P   L+P   +  +L  MG   L+   F  E A  + +QF++
Sbjct: 109 ATVVTFSPHPQEFF-SGKPRKMLTPLREKIALLRSMGVEQLVLLPFNKELAALTPKQFVE 167

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           ++LV  LE   +  G  F FG+ R G    L      YG     +  L     + +SSS 
Sbjct: 168 QILVRQLEATRISVGLDFCFGRGRTGTAKDLAAIAATYGIDVTLV-PLYTYAGERISSSA 226

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAI 228
           IR AL  G++  A  LLG  +++   VI G+KIGRT+GFPTAN+QL P+  L + GVYA+
Sbjct: 227 IRDALQNGNLQKANQLLGRPYSVGGVVIEGQKIGRTIGFPTANLQLPPEKFLPRFGVYAV 286

Query: 229 RFRTQDQT--------------------------SYSGVANFGRNPTMVPNGPLLLESFI 262
           R   +++T                             GV N G  PT+    P  +E  +
Sbjct: 287 RVTLEEETEEEASGAGKFKLRPKTINLTPKSFNPPILGVMNIGCRPTVEGVSP-TVEVHL 345

Query: 263 FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            D+S ++YG+   VS  ++LRPE KF  +E LK  +  D   ARK+L S+
Sbjct: 346 LDYSGDLYGKTLNVSLENFLRPEQKFPSLEALKAQIQSDCAFARKLLYSN 395


>gi|154485026|ref|ZP_02027474.1| hypothetical protein EUBVEN_02744 [Eubacterium ventriosum ATCC
           27560]
 gi|149733979|gb|EDM50098.1| hypothetical protein EUBVEN_02744 [Eubacterium ventriosum ATCC
           27560]
          Length = 306

 Score =  283 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 4/306 (1%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
            I+      LK  +V IG FDGIH GH  +LE  +  AN     VL+F   P   +  ++
Sbjct: 3   RISLDDNIKLKNTIVTIGKFDGIHKGHEKLLEVIVNNANGRQKVVLTFETTPSAFLN-NN 61

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              T+     ++ + E+ G    ++     E    S ++F+ K+L + +   T++ G  F
Sbjct: 62  ANKTIVTEEEKQILCEQQGVDVYMKMPMKKEFLALSPDEFVSKILKDKIGATTIVCGPDF 121

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            FG   +G+   L+   +KYG++ + +++ + +    +SS++IR  +T+G + +   +LG
Sbjct: 122 HFGTKASGNVKFLKDNQKKYGYNLIVVEKEQYHNKD-ISSTSIRKKITEGKMQDVNEMLG 180

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           + + I   V  G+ +GRT+G PTAN+      +L   GVY      + QT ++ ++N G 
Sbjct: 181 HPYRIIGKVEQGKHLGRTIGLPTANIIPDETKLLPPNGVYRTVVVVEGQT-FNAISNVGV 239

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           NPT+     + +E+ I D+   IY +   V F+D++RPE  F  +EKLK  +  D +  R
Sbjct: 240 NPTVETGTKIKVETHIIDYENYIYNEIVQVQFYDFIRPERTFDSLEKLKQQIEADIETCR 299

Query: 307 KILESS 312
           +I+ ++
Sbjct: 300 RIVGNN 305


>gi|315924367|ref|ZP_07920589.1| riboflavin biosynthesis protein RibF [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622246|gb|EFV02205.1| riboflavin biosynthesis protein RibF [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 303

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/285 (31%), Positives = 142/285 (49%), Gaps = 6/285 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            +A+G FDG+H GH  +LE+   I  AN+    V++F  HP  +I  +     ++  + +
Sbjct: 12  ALALGFFDGVHKGHQKLLEKTMVIAEANHWLSGVMTFESHPLKLIFPAYAPKMITTNAQK 71

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              ++ MG   +   +FT E  N S E FI+  L+    V+ ++ G  + FG   AG   
Sbjct: 72  TAAMKAMGIDRIFINQFTEELMNLSPEAFIRDYLLLKYNVRHLVVGFNYTFGYKGAGMTK 131

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L   G +YGF    +        + VSS+ IR  +  G V +   LLG  + +E  ++ 
Sbjct: 132 DLVDFGSEYGFTVSVMPP-CVIGGETVSSTRIRELVATGKVEDVPPLLGRPYAVEGKIVT 190

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++G T   PTAN+Q    +++   GVY  +    D   Y G+ N G NPT     P  
Sbjct: 191 GKRLGHTFDVPTANLQSDVSVIMPSTGVYFTKVE-LDGKQYDGLTNLGYNPTF-DKHPYS 248

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           +E++I+DF+Q IYG    VSF   +R EIKF+ ++ L   +  D 
Sbjct: 249 IETYIYDFNQNIYGHHLKVSFLKKIRDEIKFESVDALIARIKHDI 293


>gi|315079492|gb|EFT51485.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL053PA2]
          Length = 336

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 33  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 90

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+++V +  L+ + V+ G
Sbjct: 91  PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVG 149

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 150 QNFRFGRQAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 205

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA                
Sbjct: 206 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 265

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG   TV+F + LR +IKF  IE L   M
Sbjct: 266 SAISVGTNPTF-DGVERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQM 324

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 325 ADDVETAKRVLS 336


>gi|295099644|emb|CBK88733.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium cylindroides
           T2-87]
          Length = 323

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/316 (29%), Positives = 167/316 (52%), Gaps = 14/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++      ++ +P      V  IG FDG H GH  +++QAI+I    N  +++++F+P 
Sbjct: 1   MNIIRI--NHKHIPPVFNKTVACIGYFDGFHKGHQQLVKQAIEIAQKKNIDVSIITFDPD 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I +    ++ L   S + ++ + +G        FT + A+ SA+QF   +    + +
Sbjct: 59  PWHIFKPEMKLYHLMSLSDKIQVSKSLGAQNFYILTFTKDFASLSADQFHDVL--HQMNI 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G  F++G   AG+   L+   ++  F  V +D + N  ++ +SSS I   + +G+
Sbjct: 117 DTLVCGFDFQYGCKNAGNVETLK---KQNLFDVVVVDSI-NEDNKKISSSRIEPMILEGN 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLSPDILLKE-GVYAIRFRTQDQT 236
           V +A H+ GY ++I   ++HG K G TL   PTAN+ +  + ++   GVYA    + D T
Sbjct: 173 VYDANHMTGYIYSIHGKIVHGFKRGSTLLNIPTANLLVDEEYVIPNTGVYAG-CVSVDDT 231

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + N G+NPT   N    +E+ I +F Q++Y +     F+  +R E KFK+I++LK 
Sbjct: 232 LYYAMINIGKNPTF-ENEIQTIEAHILNFDQDLYEKEVRFYFYKKIRDEKKFKNIDELKD 290

Query: 297 YMGEDEKKARKILESS 312
            +  D K  + I+ SS
Sbjct: 291 QLVSDIKTTQNIMTSS 306


>gi|184155212|ref|YP_001843552.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
 gi|260662288|ref|ZP_05863184.1| riboflavin biosynthesis protein RibF [Lactobacillus fermentum
           28-3-CHN]
 gi|183226556|dbj|BAG27072.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
 gi|260553671|gb|EEX26563.1| riboflavin biosynthesis protein RibF [Lactobacillus fermentum
           28-3-CHN]
          Length = 321

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 12/321 (3%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V   H+  + Q +P+     VVA+G FDG+H GH  ++ +A +       P+ VL+++
Sbjct: 1   MEVIKVHHPLLEQQVPD--GPVVVAMGFFDGVHRGHQAVIARAKEEAVRRQVPLAVLTYD 58

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             P  + Q     +  L+    +  +LE++G   +    FT +  + S E+F+   LV  
Sbjct: 59  KLPGIVYQRYDEGVHYLTTIDRKLALLEQLGADLVYLVDFTAKLGSLSPEEFVSDYLV-R 117

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +    V+ G    +GK        L        F  V + + +  +   + SS IR  + 
Sbjct: 118 MHAVAVVAGFDHTYGKKDVATMDRLVGYAAGR-FDVVTVKK-QETRGAKIGSSRIRDLID 175

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD 234
           +G V +A  LLGYR+     V+HG   GRT+GFPTAN+   P + +   GVY + F    
Sbjct: 176 QGRVEDANQLLGYRYQTSGIVVHGLARGRTIGFPTANVAWDPLERIPAVGVYTVNFLVDG 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y G+A+ G N T   N    +E ++FDF   IYG+  TVS+   LR EIKF  ++ L
Sbjct: 236 H-WYGGMASVGYNVTFGQNKHKTIEVYLFDFKGNIYGEHVTVSWIQRLRGEIKFDGVDGL 294

Query: 295 KIYMGEDEKKARKILESSYPL 315
              +  D+  +  IL +   L
Sbjct: 295 IDQLHADQINSLAILRNPPTL 315


>gi|254526979|ref|ZP_05139031.1| riboflavin biosynthesis protein RibF [Prochlorococcus marinus str.
           MIT 9202]
 gi|221538403|gb|EEE40856.1| riboflavin biosynthesis protein RibF [Prochlorococcus marinus str.
           MIT 9202]
          Length = 307

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/301 (30%), Positives = 161/301 (53%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++   + +  L
Sbjct: 7   PSEVKNPTSIAIGSFDGLHAGHRQLIKSVVEENQYTP-TIASFWPHPREVLYKETRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  ILE +G   L+   F +E +  SAE+F++ +L+  L+ K +  G  F+FG  
Sbjct: 65  DLPYEKLSILEDLGIEQLVLIPFDMELSKLSAERFVRDILINQLQAKNISVGANFKFGFR 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   ++K  +           L + + + +SSS IR  L K  + NA  +L   ++ 
Sbjct: 125 RSGDINTIKKIIKDTDIRLKITQILEDGEGR-ISSSRIRDLLEKSDLKNAFKILKRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
              V+ G+ IG+++G+PTAN+++     L  EGVYA     ++    +  V N G  PT+
Sbjct: 184 NGKVVKGKGIGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNQKFESVMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + +   ++YG   +V   + LR +IKFKDI++L   + +D   A KI +
Sbjct: 244 NPLLPSAVEVHLINKDIDLYGLNLSVEPVEKLRSQIKFKDIDQLSNQIKKDRDNALKIFK 303

Query: 311 S 311
           +
Sbjct: 304 N 304


>gi|116333938|ref|YP_795465.1| FAD synthase [Lactobacillus brevis ATCC 367]
 gi|116099285|gb|ABJ64434.1| FMN adenylyltransferase / riboflavin kinase [Lactobacillus brevis
           ATCC 367]
          Length = 315

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 12/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           + + H ++  Q +P+  +  V+A+G FDG+H GH  ++ +A  +     + + VL+++ H
Sbjct: 4   IRIHHPLDARQ-IPD--EPVVLAMGFFDGVHRGHQAVIARAKALAQEKQAKLAVLTYDHH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   +     LS P+ + + LE++G   +    +T E A+ S ++F+   LV + 
Sbjct: 61  PALVYRPLEADDRKYLSIPTRKLQQLERLGVERVFLVNYTGEFASQSPQEFVDHYLVAF- 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                + G    +GK        L    +  G  TV          Q +SS+ IR A+ +
Sbjct: 120 HTVVAVAGFDHTYGKKDVATMDRLADYAK--GRFTVETVAQEAQDQQKISSTRIRQAMKQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HGE  GRT+G+PTAN+       L   G+Y  R +    
Sbjct: 178 GDIDLANQLLGYPYRSTGVVVHGEARGRTIGYPTANILTPENQWLPGIGIYTARLKV-GA 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ + GRN T     P+ +E  + DF   +YG+   V +   LR EIKF D + L 
Sbjct: 237 IWYPGMVSIGRNVTFGDGRPITVEMNLLDFQGNLYGEPVEVEWQHRLRGEIKFADADGLV 296

Query: 296 IYMGEDEKKARKILE 310
             + +DE++ R   +
Sbjct: 297 DQLQQDERETRAYFQ 311


>gi|123966667|ref|YP_001011748.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9515]
 gi|123201033|gb|ABM72641.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9515]
          Length = 307

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/301 (31%), Positives = 158/301 (52%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  +++  +K    +P T+ SF PHPR I+   + +  L
Sbjct: 7   PSEVKNPTSIAIGSFDGVHAGHRQLIDSVVKENKYTP-TIASFWPHPREILYGETRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  ILE +G   L+   F    +  SA+ FI+++L+  L+ K++  G  FRFG  
Sbjct: 65  DLPEEKLPILEDLGIEQLVLIPFDKNLSRLSADNFIKEILINQLQAKSISVGANFRFGYK 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   ++            I  L++N+ + +SSS +R  L K  + NA  +L   ++ 
Sbjct: 125 RSGDINTIKLITRDMDIKLKIISILKDNEGR-ISSSRVRDLLQKSDLKNALRILNRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
           +  V+ G+ IG+ LGFPTAN+++     L  EGVYA      +     + V N G  PT+
Sbjct: 184 KGKVVKGKGIGKRLGFPTANLEIDGRKFLPGEGVYAAWSTINNSPNKIASVMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + +   ++Y    +V   + LR +IKF++I++L   +  D + A KIL 
Sbjct: 244 DPLLPSAVEVHLINKDIDLYDLNLSVEPVEKLRSQIKFQNIDQLSNQITIDRENALKILN 303

Query: 311 S 311
            
Sbjct: 304 E 304


>gi|320105943|ref|YP_004181533.1| riboflavin biosynthesis protein RibF [Terriglobus saanensis SP1PR4]
 gi|319924464|gb|ADV81539.1| riboflavin biosynthesis protein RibF [Terriglobus saanensis SP1PR4]
          Length = 331

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 12/315 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHP 59
            +   +E   +LP+ L   +V IGNFDG+H GH  +++  I  A         ++ +PHP
Sbjct: 4   KIIRGLE---NLPSDLGNTIVTIGNFDGVHCGHRWVIDHVINCARKLSARAIAVTLDPHP 60

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++    +  ++P   + ++L + G  A++   F  E AN SA  F   VL   L  +
Sbjct: 61  AKLLRPDRGLRLITPGDRKLELLAETGLDAVLVLPFNTELANTSARDFATNVLHRALHAQ 120

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  FRFG D       L   G++ GF        ++ + Q +SSS IRT +  G++
Sbjct: 121 EVHEGENFRFGHDAEAGTDGLAALGKELGFSVHAYAP-QSMRGQAISSSRIRTLIAAGNL 179

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT--- 236
             A  LLG  F+I+S    G   G     PT N+    ++L   GVY  + +  + T   
Sbjct: 180 PQARALLGREFSIDSTPASGRGYGTQYAVPTINLAPYAELLPANGVYITKLQIGEGTEAE 239

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIEKL 294
           S+ GV N G  PT   +    +E+ +F+F      +     ++F   LR EI+F   E L
Sbjct: 240 SFDGVTNIGNRPTFGADS-FAVETHLFNFHPVALTETTPLRLTFKLRLRNEIRFPSPEAL 298

Query: 295 KIYMGEDEKKARKIL 309
           K  +G D  KA++ L
Sbjct: 299 KAQIGRDIAKAQRYL 313


>gi|167756863|ref|ZP_02428990.1| hypothetical protein CLORAM_02412 [Clostridium ramosum DSM 1402]
 gi|167703038|gb|EDS17617.1| hypothetical protein CLORAM_02412 [Clostridium ramosum DSM 1402]
          Length = 304

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 10/306 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V +  E N      L+   VA+G FDG+HLGH  ++++ +K     N    +L+F+ H
Sbjct: 1   MKVIYLNEENMI---ALEPSCVALGFFDGMHLGHQKLIDEVLKVSKIKNLKKGLLTFDVH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++ +   S    L     + + LEK+ F  L   +F  + A+    QFI + +++  ++
Sbjct: 58  PKSYLL-DSSFKYLMSLEDKIEFLEKLNFDYLFVLRFNHQLASKEPRQFIDEFIIKP-KI 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FG   +GD   L+       +    ID+L   +   +SSS +R  L+ G 
Sbjct: 116 KHVVCGFDFHFGNHGSGDSVYLKN-NRNNDYEISIIDKLEYEQ-HKISSSYLRQVLSNGQ 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A+ LLG ++ +   V+HG + GR +GFPT N+     +L K GVY  +    D   Y
Sbjct: 174 VELASQLLGRQYQVTGKVVHGRENGRKIGFPTINVAAIDYVLPKNGVYGAK-VIIDGKEY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G NPT        LE  IFDF Q +YG++  V F  ++R E KF  I  L   +
Sbjct: 233 IGMANLGYNPTFTALKQASLEVNIFDFDQNVYGKQVNVMFIKHIRSEKKFPSINDLIEQL 292

Query: 299 GEDEKK 304
            +D+++
Sbjct: 293 NKDKQQ 298


>gi|291288284|ref|YP_003505100.1| riboflavin biosynthesis protein RibF [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885444|gb|ADD69144.1| riboflavin biosynthesis protein RibF [Denitrovibrio acetiphilus DSM
           12809]
          Length = 305

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 161/313 (51%), Gaps = 10/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M +  ++   Q+     K  V++IGNFDG+HLGH  I+ + +++A +      +++F+PH
Sbjct: 1   MEIIRDLTQFQA----EKNMVISIGNFDGVHLGHASIVRRIVELAKDRGFESGLVTFDPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P     +   +  L    ++ +  EK+G   L    F  E A+     F+++ L++ +  
Sbjct: 57  PMRFFGAD--VDLLQTTEMKAEEFEKLGVDKLFLLSFNKEIASIDPSVFVREFLIKKMMA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  +RFG++R G    LQ  GEK GF  + + ++  +     SS+NIR  L +G 
Sbjct: 115 SFIVVGYDYRFGRNRQGSYEFLQIMGEKLGFTALRVSKVVVD-GVTASSTNIRKFLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG  + +  +V+ G+ +   +GFPTAN+ +  +++   G+Y+      D   +
Sbjct: 174 PETAAKLLGRNYVMRGEVVRGDGLATKIGFPTANINVQNELIPANGIYSSIVHI-DGKQH 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G    G  PT+   G   +E  +FDFS+ +YG+   V   +++R + KF ++++L   +
Sbjct: 233 IGALYIGDRPTVADAGNRRVEVNVFDFSENLYGKVIDVEVVNFIRKDSKFSNVDELIKNI 292

Query: 299 GEDEKKARKILES 311
            ED K  R + E 
Sbjct: 293 SEDCKNIRVLFEK 305


>gi|331002476|ref|ZP_08325994.1| riboflavin biosynthesis protein RibF [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410292|gb|EGG89726.1| riboflavin biosynthesis protein RibF [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 316

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 8/311 (2%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSS 66
           IN +  N  +   V IG FDG H GH  +     +          V SF   P  I+++ 
Sbjct: 5   INTTDINITEKTAVVIGKFDGEHRGHRKLFRTLKEEANKKGLKTVVFSFRTLPSNIVRNK 64

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +     +    + K LE++G    I Y F +  A  + E+F+  +L+  L +  ++ G  
Sbjct: 65  NTTQIFTNVERRRK-LEELGIDYYIEYPFDMNIARLTGEEFLVDILIGKLGMAEIVAGDD 123

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             FG  ++G+  +L K  +  GF    I + +++    +SS+ IR+ L +G +  A  LL
Sbjct: 124 AAFGYKKSGNIELLNKLSKSLGFDLRIITKEKDDFQNDISSTLIRSKLDEGDMEEANKLL 183

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ-DQTSYSGVANF 244
           G  ++I   V  G KIG  +GFPT N+    +  L K GVYA R R   D T Y G+ N 
Sbjct: 184 GSVYSITGTVEEGNKIGAKIGFPTLNIFPPKEKHLPKPGVYASRVRIGDDDTMYLGLTNV 243

Query: 245 GRNPTMVPNGP---LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           G NP++  +       +E+++++F   +YG+   V  + Y+R EIKF+ +++LK  + +D
Sbjct: 244 GSNPSIENDKRNHIYRVETYLYNFDASLYGREIEVFLYKYIRQEIKFQSLDELKSQISKD 303

Query: 302 EKKARKILESS 312
           + +    L S 
Sbjct: 304 KIEVLNFLNSQ 314


>gi|237734573|ref|ZP_04565054.1| riboflavin biosynthesis protein ribC [Mollicutes bacterium D7]
 gi|229382393|gb|EEO32484.1| riboflavin biosynthesis protein ribC [Coprobacillus sp. D7]
          Length = 306

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 10/306 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M V +  E N      L+   VA+G FDG+HLGH  ++++ +K     N    +L+F+ H
Sbjct: 3   MKVIYLNEENMI---ALEPSCVALGFFDGMHLGHQKLIDEVLKVSKIKNLKKGLLTFDVH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P++ +   S    L     + + LEK+ F  L   +F  + A+    QFI + +++  ++
Sbjct: 60  PKSYLL-DSSFKYLMSLEDKIEFLEKLNFDYLFVLRFNHQLASKEPRQFIDEFIIKP-KI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ G  F FG   +GD   L+       +    ID+L   +   +SSS +R  L+ G 
Sbjct: 118 KHVVCGFDFHFGNHGSGDSVYLKN-NRNNDYEISIIDKLEYEQ-HKISSSYLRQVLSNGQ 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           V  A+ LLG ++ +   V+HG + GR +GFPT N+     +L K GVY  +    D   Y
Sbjct: 176 VELASQLLGRQYQVTGKVVHGRENGRKIGFPTINVAAIDYVLPKNGVYGAK-VIIDGKEY 234

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G NPT        LE  IFDF Q +YG++  V F  ++R E KF  I  L   +
Sbjct: 235 IGMANLGYNPTFTALKQASLEVNIFDFDQNVYGKQVNVMFIKHIRSEKKFPSINDLIEQL 294

Query: 299 GEDEKK 304
            +D+++
Sbjct: 295 NKDKQQ 300


>gi|294789423|ref|ZP_06754660.1| riboflavin biosynthesis protein RibF [Simonsiella muelleri ATCC
           29453]
 gi|294482636|gb|EFG30326.1| riboflavin biosynthesis protein RibF [Simonsiella muelleri ATCC
           29453]
          Length = 307

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 8/301 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           P   +G  V IGNFDG+H GH  IL+             T + F P P       SP + 
Sbjct: 9   PFVPQGSAVTIGNFDGVHTGHLHILQTLKQQAEQRQLATTAIIFEPQPTEFFAQQSPPYR 68

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           L+P   + ++L++ G    +   +FT   AN +A  FIQ +L+  L  + ++ G  FRFG
Sbjct: 69  LTPLRDKIQLLQQSGCLKTVWVQRFTPNFANKTAHDFIQHILLGHLNTRYLLVGDDFRFG 128

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R GD  +LQ   +   F T     +  +  +  SS+ +R AL  G +  A  +LG+ +
Sbjct: 129 KARGGDFELLQSYSQ---FETQNTPSVLVSGCRA-SSTAVRQALAAGDLRTATQILGHAY 184

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           T+   V HG K+GRT+G PTAN+ L        GV+ +R  T     Y GVA+FG NPT+
Sbjct: 185 TLSGHVKHGAKLGRTIGCPTANVHLPKHSYALRGVFVVRVLTA-FGKYHGVASFGVNPTV 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  LE  +FD+S  +YG+R  V F   LR E KF D+  L+  + +D   A+  L 
Sbjct: 244 SNTLTPKLEVHLFDYSGNLYGERIDVQFLHKLRDEEKFADLTTLQQQIQQDMLDAQTWLA 303

Query: 311 S 311
           +
Sbjct: 304 N 304


>gi|281357725|ref|ZP_06244211.1| riboflavin biosynthesis protein RibF [Victivallis vadensis ATCC
           BAA-548]
 gi|281315672|gb|EFA99699.1| riboflavin biosynthesis protein RibF [Victivallis vadensis ATCC
           BAA-548]
          Length = 325

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 7/303 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IG FDG+HLGH  I+ + ++ A  +      ++F+PHPR ++  +     L P S +
Sbjct: 23  ALGIGVFDGVHLGHRRIISELVRQAKRNGAVPAAMTFDPHPRAVLHPTEAPTLLVPLSER 82

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGTKFRFGKDRAGDR 137
            ++L + G   ++  +FT E A    E+F+++ +      +  +  G ++RFG+   GD 
Sbjct: 83  IRLLREAGAELVLVVRFTAEFARLEPEEFLRRLLECPEFRLAGICVGERWRFGRGGCGDS 142

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L++     G       EL     + VSSS IR A+  G +  AA +LG  + +   V 
Sbjct: 143 ALLREYARSRGLDFTACPELEI-GGETVSSSVIRRAIAAGRLDTAAEMLGRPYRLTGVVE 201

Query: 198 HGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV-PNGP 255
           +G     + L  PTAN+     +L  +GVYA     +D   Y    N G  PT       
Sbjct: 202 YGYGAATSRLSCPTANLDFKAGVLPPDGVYAG-CAVRDGRLYPAAINVGLCPTFGWEQAR 260

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             +E  + D++  +YG    V F  +LR E  F   E+LK+ +  D  + R+        
Sbjct: 261 RRVEIHLLDYTGNLYGSELGVEFLHHLREERTFTGPEELKLQIDRDLVRIREFFAQRQAQ 320

Query: 316 SER 318
             +
Sbjct: 321 EGK 323


>gi|2500205|sp|P73651|RIBF_SYNY3 RecName: Full=Riboflavin biosynthesis protein ribF; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1652777|dbj|BAA17696.1| slr1882 [Synechocystis sp. PCC 6803]
          Length = 284

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 98/277 (35%), Positives = 147/277 (53%), Gaps = 5/277 (1%)

Query: 35  HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
             +++ A  + +     V+SFNPHPR+     +    L+P   +   L  +G   L+   
Sbjct: 4   RQVMDFAQAVEHLLHPAVVSFNPHPRSFFSGRTQP-LLTPLPEKAAQLTAIGIEQLVLLP 62

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           FT + AN S +QF+Q +LVE L+ K +  G  F FG  R G+   LQ  G+++G  TV I
Sbjct: 63  FTEKLANLSPKQFVQSILVEQLQAKFISVGQDFCFGHQRRGNVQDLQNLGQEFGI-TVAI 121

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ 214
            +L    ++ +SSS IR AL +G +  A HLLG  + +   V+ G+++GR LGFPTAN+ 
Sbjct: 122 AQLEQTDTERISSSRIRRALKEGKLAMANHLLGRPYALRGTVVQGQQLGRKLGFPTANLC 181

Query: 215 LSPDIL-LKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
           L  D L  K GVYA              V N G  PT+    P   E  +  +S ++YGQ
Sbjct: 182 LPADKLWPKYGVYAGWVNLNALDVPIPAVINLGDRPTVNGQEPSA-EVHLLQWSGDLYGQ 240

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              V+   YLRPE KF  +++LK  + +D ++A K+L
Sbjct: 241 GLEVALTHYLRPETKFAGLDQLKNQIAQDCQQAEKLL 277


>gi|227872008|ref|ZP_03990393.1| tRNA pseudouridine 55 synthase [Oribacterium sinus F0268]
 gi|227842151|gb|EEJ52396.1| tRNA pseudouridine 55 synthase [Oribacterium sinus F0268]
          Length = 531

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 156/297 (52%), Gaps = 9/297 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           +  ++  G FDG+HLGH  I E+  K      +   VLSF  HP  +         L   
Sbjct: 230 ENTILTFGKFDGLHLGHQKIFEELFKEGKAENLVPSVLSFTTHPSALFSGERQ-DLLCTE 288

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
                 L+  GFS +  +  TLETA  S E+F++ +LV+ L+VK ++ GT   FG    G
Sbjct: 289 DEHFTRLQNAGFSQIFLFPLTLETAKMSPEKFLENILVKALKVKHLVVGTDCSFGYKGKG 348

Query: 136 DRGILQKRGEKYGFHTVFIDELRN----NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           D  +LQ++ E +G+    +++        KS  +SS+ IR  L +G V   A LLG  +T
Sbjct: 349 DVALLQEKAEDFGYKLTVVEKALTQDATGKSVEISSTYIRKCLEEGAVEETARLLGRYYT 408

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +   V+HG+KIGR++ FPTAN+      L   EGVY  R     +  Y G+ + G+NP++
Sbjct: 409 LSGTVVHGKKIGRSINFPTANILPKEGKLCPMEGVYHTR-VLLGKDYYEGMTSIGKNPSV 467

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             N PL +E+ I  F  +IYG++  + F  ++R +  FKDIE+LK  + +D     +
Sbjct: 468 AENNPLTIETHILGFQGDIYGEKLRLEFISFIREQRHFKDIEELKSQLEKDLAFVEE 524


>gi|303232204|ref|ZP_07318907.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513310|gb|EFL55349.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 309

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/315 (32%), Positives = 167/315 (53%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M   H+ +  + +    +  V A+G FDG+H GH  ++  AI  A        +++F+ H
Sbjct: 1   MKHLHSFDELRQIN---RKIVYALGTFDGVHRGHQRVIGNAIAEAKAHDAVTVLVTFSAH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI++       +    I ++ILE +    ++R    L+  N S ++F+  +  + ++V
Sbjct: 58  PMTILRPGDVPKRVLSADIMDEILESLKVDYILRLPMNLDIFNMSPDKFLDALCGD-IDV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  GT F FG   AG+  ++++R    G H + ++ L + +   + S+NIR A+ +GH
Sbjct: 117 VGIAIGTNFTFGAKGAGNPQLMRERLSAKGIH-IIVEPLLSTEEGPICSTNIRKAIEEGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +  AA  LG  +     VI G++ GRTLGFPT N  L  ++ +  +GVYA R    D   
Sbjct: 176 MEQAATWLGRPYQFRGIVIKGDQRGRTLGFPTINFLLPNEMAIPPDGVYANR-VCIDGIW 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G NPT   N     E  +FDF Q++YG+  TV F  Y+R E+KF ++++L   
Sbjct: 235 YDGVGNIGDNPTF-KNQYHRCEVHVFDFDQDVYGKEVTVQFISYIRGEVKFNNLQELIDQ 293

Query: 298 MGEDEKKARKILESS 312
           M  DE+ A +IL ++
Sbjct: 294 MKVDEETAIRILRNN 308


>gi|148543934|ref|YP_001271304.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus reuteri
           DSM 20016]
 gi|184153330|ref|YP_001841671.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri JCM
           1112]
 gi|227364843|ref|ZP_03848890.1| FAD synthetase [Lactobacillus reuteri MM2-3]
 gi|325682531|ref|ZP_08162048.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri MM4-1A]
 gi|148530968|gb|ABQ82967.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus reuteri
           DSM 20016]
 gi|183224674|dbj|BAG25191.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri JCM
           1112]
 gi|227070106|gb|EEI08482.1| FAD synthetase [Lactobacillus reuteri MM2-3]
 gi|324978370|gb|EGC15320.1| riboflavin biosynthesis protein RibF [Lactobacillus reuteri MM4-1A]
          Length = 315

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 12/318 (3%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V   H+    + +P      V+A+G FDG+H GH  +++ A +I      P+ VL+++
Sbjct: 1   MQVIKIHHPLAKRLIPA--GPIVLAMGFFDGVHRGHQAVIKCAREIAREKGLPLVVLTYD 58

Query: 57  PHPRTIIQSSSP-IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             P  + +        LS    + ++L  +    +    FT   A+ S +QF+ + LV +
Sbjct: 59  HAPGIVYRQYKGGFKYLSTVDRKLELLNDLDVDRVYLISFTSSFASLSPQQFVDEYLVGF 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTAL 174
              +TV+ G    +GK+      +L K      F  V + +   + S + V S  IR  +
Sbjct: 119 -HAQTVVAGFDHTYGKEDIASMKLLPKYAAGR-FEVVTVPKFTEDGSQEKVGSREIRKLI 176

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
             G+V  A   LGY +     V+HG   GRTLGFPT N++    + +   GVYA++ +  
Sbjct: 177 DAGNVEAANQALGYPYQTTGLVVHGLARGRTLGFPTINVEHPEEERIPGIGVYAVKVK-L 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +  Y G+A+ G N T      L +E  +FDF Q +YG+   V ++ YLR E KF   + 
Sbjct: 236 SKKWYDGMASVGHNITFGDANQLTVEINLFDFQQMVYGEEVVVRWYQYLRGEEKFTGADA 295

Query: 294 LKIYMGEDEKKARKILES 311
           L   M +DE+ AR ILE 
Sbjct: 296 LVAQMKQDEQDARHILEK 313


>gi|313763613|gb|EFS34977.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL013PA1]
 gi|313794008|gb|EFS42032.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA1]
 gi|313801394|gb|EFS42645.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA2]
 gi|313807926|gb|EFS46407.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA2]
 gi|313813336|gb|EFS51050.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL025PA1]
 gi|313816793|gb|EFS54507.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL059PA1]
 gi|313819712|gb|EFS57426.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL046PA2]
 gi|313822182|gb|EFS59896.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA1]
 gi|313823584|gb|EFS61298.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA2]
 gi|313825908|gb|EFS63622.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL063PA1]
 gi|313829588|gb|EFS67302.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL063PA2]
 gi|313839884|gb|EFS77598.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL086PA1]
 gi|314914768|gb|EFS78599.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA4]
 gi|314919270|gb|EFS83101.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA1]
 gi|314920819|gb|EFS84650.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA3]
 gi|314924671|gb|EFS88502.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL036PA3]
 gi|314930498|gb|EFS94329.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL067PA1]
 gi|314954344|gb|EFS98750.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL027PA1]
 gi|314957471|gb|EFT01574.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA1]
 gi|314962059|gb|EFT06160.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA2]
 gi|314963638|gb|EFT07738.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL082PA1]
 gi|314968530|gb|EFT12628.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA1]
 gi|314978845|gb|EFT22939.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL072PA2]
 gi|314986496|gb|EFT30588.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA2]
 gi|314990855|gb|EFT34946.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA3]
 gi|315081281|gb|EFT53257.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL078PA1]
 gi|315083478|gb|EFT55454.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL027PA2]
 gi|315087165|gb|EFT59141.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL002PA3]
 gi|315089335|gb|EFT61311.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL072PA1]
 gi|315099241|gb|EFT71217.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL059PA2]
 gi|315100452|gb|EFT72428.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL046PA1]
 gi|315106800|gb|EFT78776.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL030PA1]
 gi|315109040|gb|EFT81016.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL030PA2]
 gi|327329755|gb|EGE71511.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL096PA3]
 gi|327334273|gb|EGE75987.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL097PA1]
 gi|327446441|gb|EGE93095.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL013PA2]
 gi|327451971|gb|EGE98625.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL092PA1]
 gi|327454992|gb|EGF01647.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA3]
 gi|327457719|gb|EGF04374.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL083PA2]
 gi|328752196|gb|EGF65812.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL020PA1]
 gi|328755174|gb|EGF68790.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL087PA1]
 gi|328758346|gb|EGF71962.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL025PA2]
 gi|332675903|gb|AEE72719.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes 266]
          Length = 336

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 33  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 90

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+++V +  L+ + V+ G
Sbjct: 91  PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVG 149

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 150 QNFRFGRHAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 205

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA                
Sbjct: 206 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 265

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG   TV+F + LR +IKF  IE L   M
Sbjct: 266 SAISVGTNPTFDGV-ERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQM 324

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 325 ADDVETAKRVLS 336


>gi|227539722|ref|ZP_03969771.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240364|gb|EEI90379.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 327

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 26/332 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ N++  + L       VV IG FDG+H+GH  IL    + A   N    +L+F PH
Sbjct: 1   MKIYRNLDDFEPLDC----AVVTIGTFDGVHIGHQKILSHLKESAKKINGETVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR II        L +    +   L   G   LI   FT + +N + E++I  VL+  L 
Sbjct: 57  PRLIINPDDDSLRLINDIEEKVCHLANAGIDHLILTPFTRDFSNQTPEEYISNVLIGKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G    FGKDR G    L+   E + +    I E ++     VSS+ IR +L KG
Sbjct: 117 TKKIVIGYDHHFGKDRKGSLVDLEHFAEIFDYTVEQIPE-QDINDVAVSSTRIRESLIKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQ 235
           ++  A   LGY F +   VI G++IGRT+GFPTAN+ +     ++   G+YA+     D+
Sbjct: 176 NIDTANQYLGYPFELTGTVIRGDQIGRTIGFPTANLHVHEKHKLIPAYGIYAVEVEIFDK 235

Query: 236 ------TSY---------SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
                   Y          G+   G  PT+       +E  +FDF+++IYG+   V F  
Sbjct: 236 IEEVLTGRYTEKVPFRKAKGMGYIGTRPTV-DGMTRNIEVSLFDFNEDIYGKTLKVKFLH 294

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           ++R + +F+ IE +K  +  D+K         
Sbjct: 295 FVRHDERFETIEIMKEQIQADKKYIIAYFAEQ 326


>gi|227514698|ref|ZP_03944747.1| possible FAD synthetase [Lactobacillus fermentum ATCC 14931]
 gi|227086902|gb|EEI22214.1| possible FAD synthetase [Lactobacillus fermentum ATCC 14931]
          Length = 321

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 12/321 (3%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V   H+  + Q +P+     VVA+G FDG+H GH  ++ +A +       P+ VL++ 
Sbjct: 1   MEVIKVHHPLLEQQVPD--GPVVVAMGFFDGVHRGHQAVIARAKEEAVRRQVPLAVLTYE 58

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             P  + Q     +  L+    +  +LE++G   +    FT +  + S E+F+   LV  
Sbjct: 59  KLPGIVYQRYEEGVHYLTTIDRKLALLEQLGADLVYLVDFTAKLGSLSPEEFVSDYLV-R 117

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +    V+ G    +GK        L        F  V + + +  +   + SS IR  + 
Sbjct: 118 MHAVAVVAGFDHTYGKKDVATMDRLAGYAAGR-FDVVTVKK-QETRGAKIGSSRIRDLID 175

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQD 234
           +G V +A  LLGYR+     V+HG   GRT+GFPTAN+  +P + +   GVY + F    
Sbjct: 176 QGRVEDANQLLGYRYQTSGIVVHGLARGRTIGFPTANVAWNPLERIPAVGVYTVNFLVDG 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y G+A+ G N T   N    +E ++FDF   IYG+  TVS+   LR EIKF  ++ L
Sbjct: 236 H-WYGGMASVGYNVTFGQNKHKTIEVYLFDFKGNIYGEHVTVSWIQRLRGEIKFDGVDGL 294

Query: 295 KIYMGEDEKKARKILESSYPL 315
              +  D+  +  IL +   L
Sbjct: 295 IDQLHADQINSLAILRNPPTL 315


>gi|330718224|ref|ZP_08312824.1| riboflavin kinase / FMN adenylyltransferase [Leuconostoc fallax
           KCTC 3537]
          Length = 319

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 100/312 (32%), Positives = 163/312 (52%), Gaps = 11/312 (3%)

Query: 7   IEINQSLPNHLKG--GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
           I ++  +   ++    VVA+G FDGIHLGH  +L+QA   A+    P  +L++ PHP  +
Sbjct: 6   INLHYPIKQDIEPMPQVVAMGFFDGIHLGHQAVLQQAKSEADALGIPSAILTYAPHPAVV 65

Query: 63  IQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            Q    P+  L+P S + ++L+++G   +    FT + A    + F+  VL+  L   TV
Sbjct: 66  FQKFDQPMQYLTPLSEKLRLLQEIGIDYMYVMNFTSQLARVKPQAFVDDVLM-RLNPVTV 124

Query: 122 ITGTKFRFG-KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           + G    +G K+   D   L     +  F+T+ ++++ ++ ++ V S  IR  L  GHV 
Sbjct: 125 VAGFDHLYGPKNSQADMQHLSSY-AQNRFNTIVVNKV-DHDTEKVGSRQIRHLLNNGHVD 182

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYS 239
            A   LG  +     V+HGE  GR LGFPTAN++ +   ++   G+YA+         Y 
Sbjct: 183 EANQQLGRIYETAGLVVHGEARGRELGFPTANIETTIQQLVPGIGIYAVEILVAGYWRY- 241

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+A+ GRN T     P+ +E  I DF++EIYG+   V +  YLR E+KF ++E L   + 
Sbjct: 242 GMASIGRNVTFGAKRPITIEINILDFNEEIYGEFVRVRWHHYLRGEVKFDNVETLIQQLQ 301

Query: 300 EDEKKARKILES 311
           +DE   R   + 
Sbjct: 302 QDEIVTRTYFKK 313


>gi|225629854|ref|ZP_03787764.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591290|gb|EEH12420.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 310

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + +N E  Q + N++    +  GNFDGIHLGH   +    K+      P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIENNI---ALTFGNFDGIHLGHEFAISTLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++   +  F L     +++++   G   L    F    +  S + FI ++L++    
Sbjct: 56  PSTVLFGRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFISEILIDKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+   L+K  E YG+    ++ L  +     SSS IR  + +G 
Sbjct: 115 KHIIVGENCTFGHKRLGNILTLEKYSEIYGYSLTKLEPLTIDGKICSSSS-IREYVQRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQD--Q 235
           +  A  LLG  + +   V  G   GR +GFPT N+ +   ++  K G Y  R    D   
Sbjct: 174 IEIANKLLGRPYQVSGVVTKGACRGREIGFPTINIPIEDRMIKPKFGTYYARVTFPDSNP 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
               GV N G  PT       ++E  IFDF +++Y  +  +    ++R E K   IE+L 
Sbjct: 234 NWLYGVVNIGMRPTFKDLKKPIIEMHIFDFDEDVYSHKVNIQLLKFIRSEKKSHSIEELT 293

Query: 296 IYMGEDEKKARKI 308
             +  D  K  ++
Sbjct: 294 KQINYDILKVYRL 306


>gi|46204417|ref|ZP_00050033.2| COG0196: FAD synthase [Magnetospirillum magnetotacticum MS-1]
          Length = 278

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 99/268 (36%), Positives = 137/268 (51%), Gaps = 3/268 (1%)

Query: 41  AIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100
               + + P  VL+F PHPR       P+F LS    +E +  ++G   LI  +F    A
Sbjct: 1   MRHESGSRPAAVLTFEPHPRAFFAPDQPMFRLSGRRAKEIVFARLGLDGLIVRRFDAALA 60

Query: 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN 160
             SA+ F++  L + L V  V+ G  F FG+ R G  G L     + G     +  +  +
Sbjct: 61  GTSAQGFVEGWLRDQLGVSGVVIGHDFHFGRGREGSPGTLADLCAQAGIGCRIVPAVSAD 120

Query: 161 KSQ-IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI 219
                +SSS IR AL  G V  A  LLGYR+ + ++V HG+K GRTLG+PTAN+ L    
Sbjct: 121 PGDAPISSSAIRAALAAGDVARANALLGYRWFVLAEVRHGDKRGRTLGYPTANLALDA-C 179

Query: 220 LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
            L  G+YA+R R  D   + GVA++GR PT   +G  LLE  +FDF  ++YGQ   V   
Sbjct: 180 GLAHGIYAVRVRLADGNLHPGVASYGRRPTF-DDGAPLLEVHLFDFKGDLYGQEVAVELL 238

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            YLR E +F   E L   M  D  +AR 
Sbjct: 239 AYLRGEERFASAEALVAQMDVDSMQARA 266


>gi|229820972|ref|YP_002882498.1| riboflavin biosynthesis protein RibF [Beutenbergia cavernae DSM
           12333]
 gi|229566885|gb|ACQ80736.1| riboflavin biosynthesis protein RibF [Beutenbergia cavernae DSM
           12333]
          Length = 333

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 93/328 (28%), Positives = 149/328 (45%), Gaps = 13/328 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+H +     +P+ +   VV IGNFDG+H GH  +L   +  A  +      ++F+PH
Sbjct: 1   MQVWHGL---GQVPSDVTTSVVTIGNFDGVHRGHRGVLAHVVARARENGALAVAMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + +       L+    +  +L + G  A++   +T + A    E F+++ LV+ L  
Sbjct: 58  PARVHRPQDAPEELTGLEDKLALLAETGLDAVLVVHYTADFAGQDPEHFVRRYLVDALHP 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-IVSSSNIRTALTKG 177
             V+ G   RFG    GDRG +   G   GF    ++++  + S+   SS+  R  L  G
Sbjct: 118 VVVVIGRDVRFGAGNTGDRGTMAALGGALGFDVDVVEDVVPDASERRWSSTWARELLAAG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQT 236
            V   A +LG    +   V+HGE  GR LGFPTAN+   +   +  +GVYA         
Sbjct: 178 DVAGLALVLGRLHRMRGAVVHGEARGRALGFPTANLDPAASGAVPADGVYAGWLLRDGGR 237

Query: 237 --SYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
                   + G NPT        +E+ +      ++YG+   V F   LRP ++F  ++ 
Sbjct: 238 GDRLPAAISVGTNPTF-DGLVRQVEAHVLGRTDLDLYGEEVVVEFAVRLRPTLRFDGVDP 296

Query: 294 LKIYMGEDEKKARKILE--SSYPLSERD 319
           L   M ED   A + L   +  PL+  D
Sbjct: 297 LVEQMREDVADAARALGVPAPAPLATVD 324


>gi|188994856|ref|YP_001929108.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
 gi|188594536|dbj|BAG33511.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
          Length = 323

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 6/297 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              IG FDGIH GH  +L+Q  K+A     P  V++F+  P ++++  +P   L+    +
Sbjct: 24  AATIGTFDGIHFGHRFLLDQLKKMAKEKHLPTMVITFDVPPISVVRPGTPYQKLTTIGEK 83

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LE  G    +   FT E    +A+ FI  +L + L VK ++ G   RFG  R     
Sbjct: 84  LLRLETEGVDYTVVLPFTPELVAMTADTFITTILHKRLHVKALLIGYDHRFGHGRISGLE 143

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
             ++     G  TV             SSS +R AL   ++  A  LLGY + +   V H
Sbjct: 144 EYKQIATPLGI-TVKKASQAEIGGVPASSSVVRQALIDNNLALANQLLGYDYILTGKVEH 202

Query: 199 GEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           G +IGR LGFPTAN+ +  S  ++  +GVYA+R        Y+G+   GR PT+      
Sbjct: 203 GFRIGRELGFPTANLTVSDSHKLIPCDGVYAVRA-IVSSERYNGMLYIGRRPTLNNGDQR 261

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            +E  +F+F + IYG +  V F  ++R ++KF  +E L+  +  D  +   + ES  
Sbjct: 262 TIEVNLFEFDKTIYGSQIRVEFVSFIREDMKFDSLEALRQQIQADYGRISALFESEQ 318


>gi|303229659|ref|ZP_07316447.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515784|gb|EFL57738.1| riboflavin biosynthesis protein RibF [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 309

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 165/315 (52%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M   H+ +  + +    +  V A+G FDG+H GH  ++  AI  A        +++F+ H
Sbjct: 1   MKHLHSFDELRQIN---RKIVYALGTFDGVHRGHQRVIGNAIAEAKAHDAVTVLVTFSAH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI++       +    I ++ILE +    ++R    L+  N S ++F+  +  + ++V
Sbjct: 58  PMTILRPGDVPKRVLSADIMDEILESLKVDYILRLPMNLDIFNMSPDKFLDALCGD-IDV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  GT F FG   AG+  ++++R    G H + ++ L + +   + S+NIR A+  GH
Sbjct: 117 VGIAIGTNFTFGAKGAGNPQLMRERLSAKGIH-IIVEPLLSTEEGPICSTNIRKAIEDGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +  A   LG  +     VI G++ GRTLGFPT N  L  ++ +  +GVYA R    D   
Sbjct: 176 MEQATAWLGRPYQFRGIVIKGDQRGRTLGFPTINFLLPNEMAIPPDGVYANR-VCIDGIW 234

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G NPT   N     E  +FDF Q++YG+  TV F  Y+R E+KF ++++L   
Sbjct: 235 YDGVGNIGDNPTF-KNQYHRCEVHVFDFDQDVYGKEVTVQFISYIRGEVKFNNLQELIDQ 293

Query: 298 MGEDEKKARKILESS 312
           M  DE+ A +IL ++
Sbjct: 294 MKVDEETAIRILRNN 308


>gi|295131023|ref|YP_003581686.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK137]
 gi|291375415|gb|ADD99269.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK137]
 gi|313773550|gb|EFS39516.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL074PA1]
 gi|313811603|gb|EFS49317.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL083PA1]
 gi|313831345|gb|EFS69059.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL007PA1]
 gi|313834955|gb|EFS72669.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL056PA1]
 gi|314974220|gb|EFT18316.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL053PA1]
 gi|314976670|gb|EFT20765.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL045PA1]
 gi|314984309|gb|EFT28401.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL005PA1]
 gi|315095359|gb|EFT67335.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL038PA1]
 gi|327328378|gb|EGE70140.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL096PA2]
 gi|327444163|gb|EGE90817.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL043PA2]
 gi|327444956|gb|EGE91610.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL043PA1]
 gi|328760036|gb|EGF73616.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL099PA1]
          Length = 340

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+  +N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 37  HHRLLNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 94

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+++V +  L+ + V+ G
Sbjct: 95  PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVG 153

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 154 QNFRFGRHAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 209

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA                
Sbjct: 210 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 269

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG   TV+F + LR +IKF  IE L   M
Sbjct: 270 SAISVGTNPTFDGV-ERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQM 328

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 329 ADDVETAKRVLS 340


>gi|301165484|emb|CBW25055.1| riboflavin biosynthesis protein RibC [Bacteriovorax marinus SJ]
          Length = 307

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 8/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   V IGNFDG+H+GH  I+++  ++ +   +   ++SFNPHP  I+      F ++  
Sbjct: 13  KRFAVTIGNFDGVHVGHQSIIKEIKEVCSQEDLAFVLISFNPHPLRILNPKEN-FLINTY 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +E ++ ++G    +   F  + +      F+   ++    + ++  G  F FG ++AG
Sbjct: 72  DEKEVLISELGVDYFLEIPFDRDLSTMEPSLFLDNYILVNKNIHSLYMGHDFAFGANKAG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +    +   +  G +   +     N+ + VSSS +R  +  G V     LLG  F +  +
Sbjct: 132 NFIFAKDYCK--GVNVEKMKRFNPNE-ETVSSSVVRKLIESGDVDKVRDLLGRNFFLTGN 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G   G+ +GFPTAN+  + + +  K GVY      +    Y  + N G NPT V  G
Sbjct: 189 IVKGAGRGKQIGFPTANISYNSERITPKVGVYITTVEIRGMV-YFSITNIGFNPTFVDEG 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E+ IFDF ++IYG+   VSF   +R E KF  + +L   +  D  +A+K  + 
Sbjct: 248 KKTVETNIFDFDEDIYGEDLKVSFIKRIRDEKKFNSVNELVDQIKSDVDEAKKYFKE 304


>gi|300812603|ref|ZP_07093020.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300496476|gb|EFK31581.1| riboflavin biosynthesis protein RibF [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 313

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 90/315 (28%), Positives = 160/315 (50%), Gaps = 10/315 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V  N+             V+A+G FDG+H+GH  ++++A  I +  + P+ VL+F+ H
Sbjct: 1   MKVI-NLSYPFKKELTAGKVVLALGFFDGVHIGHQKLIKEARIIAVEKDLPLMVLTFDRH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ +         L+ P  +   + K+G   L+  KFT   ++ + + F+ ++++  L+ 
Sbjct: 60  PKEVYAGVKDFEYLNTPEEKAYEMSKIGVDYLVILKFTPGFSHLAPQAFVDEIIM-GLKA 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGE-KYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            TV+ G  + +G     +   L    + ++    V     +    + + S+ IR A+  G
Sbjct: 119 DTVVAGFDYSYGPKDVANMENLPAFAKGRFDIKVV---PKQIFAGKKIGSTEIRQAVKSG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT 236
           ++  A  LLG+ +     V+HG + G  LGFPTAN++L+ P +L K GVYA   +  D +
Sbjct: 176 NLRLATELLGHPYLTSGKVVHGFRNGHKLGFPTANLELAWPKVLPKIGVYATMTQVGD-S 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + + G N T      + +ES IFDF Q+IYGQ+ T++++ YLR E KF D+  L  
Sbjct: 235 WHQSMTSVGYNVTFNDEKKIYIESNIFDFDQDIYGQQITIAWYKYLRGEEKFADMAALSE 294

Query: 297 YMGEDEKKARKILES 311
            +  D+  +     S
Sbjct: 295 QLKLDQVASENYFSS 309


>gi|78779751|ref|YP_397863.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9312]
 gi|78713250|gb|ABB50427.1| FMN adenylyltransferase / riboflavin kinase [Prochlorococcus
           marinus str. MIT 9312]
          Length = 307

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 91/301 (30%), Positives = 157/301 (52%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  ++E  I+    +P    SF PHPR I+   + +  L
Sbjct: 7   PSEVKNPTSIAIGSFDGLHAGHRKLIESVIEENQYTPTIA-SFWPHPREILYKETRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  ILE +G   L+   F  + +N SAE F++ +L+  L+ K +  G  F+FG  
Sbjct: 65  DLPEEKLPILEDLGIEQLVLIPFDKKLSNLSAESFVRDILINQLQAKNIFVGANFKFGYR 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   ++   +           L +N+ + +SSS IR  L  G + NA  +L   ++ 
Sbjct: 125 RSGDVNTIKNTIKNMDIKLKITPILEDNEGR-ISSSRIRDLLLNGDLKNAYKILNRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
             +V+ G+ IG+ +G+PTAN+++     L  EGVYA     ++       V N G  PT+
Sbjct: 184 NGNVVRGKGIGKRIGWPTANLEIDGRKFLPGEGVYAAWTIIENSNQKIPSVMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + + +  +YG   +V   + LR +I+F+++++L   + ED   A K+ +
Sbjct: 244 NPLLPSAVEVHLINKNMNLYGLNLSVEPVEKLRSQIQFQNVDQLSNQIKEDRDYALKVFK 303

Query: 311 S 311
           +
Sbjct: 304 N 304


>gi|225572735|ref|ZP_03781490.1| hypothetical protein RUMHYD_00924 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039908|gb|EEG50154.1| hypothetical protein RUMHYD_00924 [Blautia hydrogenotrophica DSM
           10507]
          Length = 309

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 16/313 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M    NIE    +P  L+   V +G FDG+H GH  ++++ ++        V        
Sbjct: 6   MDYQKNIE---KIPQVLR-CAVTLGKFDGLHRGHQKLIQRVLEKKEQGLSAV-------- 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +         +     +   LE MG    +         +   E F++++LV+ L V  
Sbjct: 54  -VFAFDQSNRMILSHEERRAKLETMGVDLFLECPLNERLRHMLPEVFVKEILVDRLHVGF 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  FRFG +R G+  +LQK G++Y F    I +   +  + +SS+ +R  L +G V 
Sbjct: 113 LAVGQDFRFGYERKGNAQLLQKMGQQYDFQVEVIPD-ETDGKRKISSTYVREQLNEGKVE 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYS 239
             A LLG  F+   +V+HG  +G     PT N+    + L    GVY  + R  DQ  + 
Sbjct: 172 KVAELLGEYFSTTGEVLHGRGLGHRKLMPTTNLVPPKEKLMPPNGVYITKSRFGDQ-QFH 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G+ N G  PT+     L +E+++F   Q +YGQ+  VSF  +LRPE +F  +EKLK  + 
Sbjct: 231 GITNVGYKPTVGAEEFLGVETYLFHCDQNLYGQKSVVSFLKFLRPERRFDSLEKLKAQLM 290

Query: 300 EDEKKARKILESS 312
            D +KA+   E +
Sbjct: 291 ADIEKAQNYFEET 303


>gi|212550382|ref|YP_002308699.1| riboflavin kinase/FMN adenylyltransferase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212548620|dbj|BAG83288.1| riboflavin kinase/FMN adenylyltransferase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
          Length = 310

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 89/307 (28%), Positives = 158/307 (51%), Gaps = 5/307 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQ 64
           ++I        +     +G FDG+HLGH  +++   + A  S +   +++F  HP  I+Q
Sbjct: 1   MKIICDFSLIEESTTATVGFFDGVHLGHRYLIKLLKEYAKKSKLKTAIITFPIHPCKILQ 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                F L+    + + L            FT E +  +A+ FIQ++L + L +K ++ G
Sbjct: 61  KDYQPFLLNTFEEKVRRLSLTEIDYCYVINFTQEFSKITAQDFIQQILHKQLRIKELLVG 120

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFGK R        + G+  G     ID+L   +    SS++IR  L +G V  AA 
Sbjct: 121 YDNRFGKGRIYGYKQYVQYGKSCGMSVRQIDKLPEKEDIHNSSTSIRQLLMEGKVKKAAD 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVA 242
            L Y +++E  V+ G ++GRT+ +PTAN+ L     ++  +G+YA     +    + G+ 
Sbjct: 181 KLSYYYSLEGKVVQGNQLGRTIDYPTANISLYDKEKVIPCKGIYATYVFIKGDK-HIGMT 239

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
             G+ PT+  +    +E  IFDF + IYG+R  + F  ++RP+I F ++++L+  +G+D+
Sbjct: 240 YIGKRPTITFDEDNRIEVNIFDFDKNIYGKRIRIEFLQFIRPDIYFHNLKELQKQLGKDK 299

Query: 303 KKARKIL 309
            K +KI+
Sbjct: 300 AKVKKII 306


>gi|187932656|ref|YP_001885475.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720809|gb|ACD22030.1| riboflavin biosynthesis protein RibF [Clostridium botulinum B str.
           Eklund 17B]
          Length = 308

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 96/289 (33%), Positives = 153/289 (52%), Gaps = 7/289 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G+FDG+H+GH  ++++  +I   NN    V +F  HPR  I  ++ +  L     + 
Sbjct: 18  VALGSFDGLHIGHLSLIDEVTRIAGKNNGKSMVFTFKNHPRKFINPNNTLKLLMENDDKI 77

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K+LE  G        F  E    + E+FI+ + V  L VK ++ G  ++FG    GD  +
Sbjct: 78  KMLEDKGIDIAYFANFNEEFMKITPEEFIKFLCVN-LNVKGIVVGFNYKFGYKNLGDTKL 136

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +KYG+    +D     K +++SS+ IR  L  G+VL A+  L   + I+ +++HG
Sbjct: 137 LKELQKKYGYELHIMDS-CTYKDEVISSTRIRKELETGNVLEASITLNRPYFIKGEIVHG 195

Query: 200 EKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            K GR +GFPTAN++ + DI L K GVY    R  +   Y G+ N G NPT+     + L
Sbjct: 196 RKFGRIMGFPTANLKYNKDIVLPKIGVYYTNVRVNN-KIYRGITNIGNNPTVN-GKEITL 253

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           E+ I DF  +IYG    V F   +R + KF  ++ L   +  ++  A K
Sbjct: 254 ETNILDFDNDIYGNTIEVHFIKKVRDQKKFNSVDDLVNELKNNKLFAEK 302


>gi|15895082|ref|NP_348431.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           acetobutylicum ATCC 824]
 gi|15024779|gb|AAK79771.1|AE007689_9 Riboflavin kinase/FAD synthase [Clostridium acetobutylicum ATCC
           824]
 gi|325509220|gb|ADZ20856.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           acetobutylicum EA 2018]
          Length = 303

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 100/292 (34%), Positives = 161/292 (55%), Gaps = 7/292 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPS 76
              V IG+FDGIH+GH  ++++AI ++  +    +  +F  HP  +I  S     L    
Sbjct: 15  RTYVTIGSFDGIHMGHLSLIKKAISLSKKNNTMSMLSTFKEHPLNVINKSIVPKILMDNE 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +IL+ +G   L  + F  E      E FI  + +    +  +ITG   RFG   +GD
Sbjct: 75  TKIEILKSIGLDILNFFDFNEEIMKMMPEDFILNM-INHYNIDGIITGFNHRFGYKNSGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+   EKYGF    +  + + K+ +VSS+ IR  ++ G++  A  +L   F+I++ V
Sbjct: 134 IHLLKTLSEKYGFELYVLPPV-SFKNDMVSSTRIRNCISDGNIEEANQMLLRPFSIKAKV 192

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           IHG +IGR +GFPTAN+      IL K GVY       ++ +Y G+ N G NPT+  +  
Sbjct: 193 IHGREIGRQIGFPTANLSYDNKFILPKIGVYYTTVEY-NKITYKGITNVGTNPTVNGDK- 250

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           L +E++I DF+Q IY +   V+F   +R +IKF+ IE+LK+ + +D+K A K
Sbjct: 251 LTIETYILDFNQNIYDEEIRVNFVKKIRDQIKFESIEQLKVQLEKDKKFAYK 302


>gi|218133597|ref|ZP_03462401.1| hypothetical protein BACPEC_01466 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990972|gb|EEC56978.1| hypothetical protein BACPEC_01466 [Bacteroides pectinophilus ATCC
           43243]
          Length = 307

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 84/312 (26%), Positives = 145/312 (46%), Gaps = 10/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M   H+ +            VV +G FDG+H GH  +L      A+         +F+  
Sbjct: 1   MRYIHDTDKF----TIEGATVVTLGKFDGVHKGHQKLLATVRDKASGYGAMSAAFTFDHI 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P + +  +     +   + +   +E +G   L+ Y FT E  N   E F++ ++ + L+ 
Sbjct: 57  PVS-LSKTPGQSYIMTNAERRSFIESLGIDILVEYPFTSEFMNTEPEVFVEDIIRKSLKA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ G  + FGK   G+  +L    ++ GF  V + +    + + +SS+ +R  L  GH
Sbjct: 116 VCVVVGPDYTFGKGGRGNVQMLADMADEAGFELVVVPKECYEERE-ISSTFVREELQVGH 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +     LL   +++   +  G +IGRT+  PT N+      +L   GVYA         S
Sbjct: 175 METVNMLLARPYSVNGVIAKGSQIGRTMNLPTINIYPPAGKLLPPNGVYAS-VTILGGKS 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GV N G  PT+  N  + +E+F+FDF +++YG    V    + RPE+KF +IE L   
Sbjct: 234 FYGVTNVGIKPTVKDNAEISVETFLFDFDEDVYGVNVEVQLRHFQRPEMKFDNIEALHKQ 293

Query: 298 MGEDEKKARKIL 309
           +  D + AR++ 
Sbjct: 294 IDADAQFARQLF 305


>gi|291519305|emb|CBK74526.1| riboflavin kinase/FMN adenylyltransferase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 308

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 156/314 (49%), Gaps = 10/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHP 59
           M   H++          +   V +G FDGIH GH L+    I K        +++F   P
Sbjct: 1   MEYLHSLFDT----VISEPTAVTVGKFDGIHRGHTLLTSDIISKKEQGLKSCLITFTNSP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           R +++  S    ++    +  +L+  G   LI   F        A+ FI+ + V+ L +K
Sbjct: 57  RFLLKEDSTPSLITN-KERMFMLDNNGLDYLIECPFDERLMQTDAKSFIEFL-VKNLNMK 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +I+G+ F FG   AG+  +L K  ++ GF    I++++ +  + +SS+ IR  L +GH+
Sbjct: 115 YMISGSDFTFGHKGAGNARLLLKLSKELGFEYKVIEKIKKDN-RDISSTYIREELKEGHI 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSY 238
                +LGY + +  +V+HG  +G  +G PT N+      ++ K GVY       D   Y
Sbjct: 174 DCVNEMLGYDYFVWGEVVHGAHLGHKIGIPTINIMPGKVKLVPKFGVYVTTIDF-DGRIY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G  P++     + +E+ I D++ ++YG+   V+F  +LRPE+KF  IE+LK  M
Sbjct: 233 HGVTNVGTKPSVSDENVVGIETHILDYNGDLYGKFVKVTFESFLRPEMKFNSIEELKNQM 292

Query: 299 GEDEKKARKILESS 312
             D+ KA+     +
Sbjct: 293 NADKIKAKNYFNKN 306


>gi|167945703|ref|ZP_02532777.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 263

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +F P PR      +    L+    + + + + G   ++  +F  + +   A +F+ ++L+
Sbjct: 1   TFEPQPREFFTPGAAPARLTRLREKLQAMYEAGIERVVILEFNRKFSVMPAREFVIELLI 60

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L V+ +  G  FRFG  RAGD  +LQ  G ++GF    ++  + +  + VSS+ IR  
Sbjct: 61  QGLGVRFLSVGDDFRFGLGRAGDFHLLQAMGSEHGFEVENMNTFKLDADR-VSSTRIREL 119

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L++G +  AA  LG  + I   V HG+K GRT+GFPT N+ L   +    GV+A+R    
Sbjct: 120 LSRGDLDRAAACLGRPYRICGRVAHGDKRGRTIGFPTMNVDLHRHVSPLRGVFAVRVHGL 179

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +    GVAN G  PT+  +   LLE  +FDF++ +YG+   V F   LR E KF   E+
Sbjct: 180 AEGVLPGVANIGTRPTVCGDPRYLLEVHLFDFNRVVYGEHLQVEFVHKLRDEKKFGSFEE 239

Query: 294 LKIYMGEDEKKARKIL 309
           L+  + ED +  R+ L
Sbjct: 240 LRAQILEDARLGREWL 255


>gi|225390149|ref|ZP_03759873.1| hypothetical protein CLOSTASPAR_03899 [Clostridium asparagiforme
           DSM 15981]
 gi|225043802|gb|EEG54048.1| hypothetical protein CLOSTASPAR_03899 [Clostridium asparagiforme
           DSM 15981]
          Length = 318

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 7/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG H GH  ++ + ++I         V +F+  P  ++         +   
Sbjct: 15  PTVVTLGKFDGRHRGHQKLMRKMMEIKAGFGYETAVFTFSVTPAVMVTGQRQPVLTTNLE 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   L+K G   L+ Y FT ET +   E+F+++VLV  +  + ++ GT   FG  R+G+
Sbjct: 75  RRNN-LKKTGIDWLVEYPFTEETKHMQPEEFVREVLVNRMNARAIVVGTDCGFGYRRSGN 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L +   KYG+    I++ ++++ + +SS+ IR  L KG+V  A  LLG  + I   V
Sbjct: 134 AQVLMELSGKYGYQLYVIEKEKDDR-RDISSTYIREELEKGNVEKANGLLGEPYAIHGTV 192

Query: 197 IHGEKIGRT-LGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           +HG  +G + LGFPTAN+      +L + GVY  R    D+  Y GV N GR PT+    
Sbjct: 193 VHGRHMGGSVLGFPTANLIPPEIKLLPRFGVYVSRVLV-DRRYYRGVTNIGRKPTIDGEN 251

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           P+ +E+FIFD  Q IYG    V    ++RPE  F  + +LK  +G D++ A +  + 
Sbjct: 252 PVGVETFIFDLEQNIYGHVIEVQLLSFIRPERTFASLGELKEQIGRDKETAAEYFKQ 308


>gi|297623841|ref|YP_003705275.1| riboflavin biosynthesis protein RibF [Truepera radiovictrix DSM
           17093]
 gi|297165021|gb|ADI14732.1| riboflavin biosynthesis protein RibF [Truepera radiovictrix DSM
           17093]
          Length = 321

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 14/305 (4%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSS 66
           ++  L   L+G V+ IGNFDG+HLGH L+L +  + A +   P  VL+F P  +   Q  
Sbjct: 17  VSSPLALELRGVVLCIGNFDGVHLGHQLLLRRLQEAATSLRAPSVVLTFFPPAKVFFQGK 76

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                L+    +  +L +   +A++   F  + A    E F++++  + L  K +I G  
Sbjct: 77  ---PYLTSAEEKLFLLRRFSPTAVVMTPFDHDYARTPKEAFLEQL--QHLAPKLLIVGED 131

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FG  R+G    LQ   E+       +  LR  + + + SS+IR  L  G V  A   L
Sbjct: 132 FHFGYKRSGGLDDLQHVTERL-----EVFSLRRLEEEPIKSSHIRELLRTGEVEQARRFL 186

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           GY +    +V  G++ GRT+GFPTAN+QL+P+  L  GV+A+   T    ++ G+AN G 
Sbjct: 187 GYSYLAIGEVTAGDRRGRTVGFPTANLQLAPEKALPIGVFAVWVETP-YGTFGGMANVGP 245

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            P+  P+ P  LE  +FDF  ++YG+   VSF  +LR + +F  ++ LK  +  DE++AR
Sbjct: 246 RPSY-PDAPPSLEVHLFDFDGDLYGKTIRVSFERFLRAQRRFAGLDDLKAQLAADEQRAR 304

Query: 307 KILES 311
             L++
Sbjct: 305 AALQA 309


>gi|190570919|ref|YP_001975277.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019435|ref|ZP_03335241.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357191|emb|CAQ54607.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994857|gb|EEB55499.1| riboflavin biosynthesis protein RibF [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 310

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 12/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + +N E  Q + +++    +  GNFDG+HLGH   +    K+      P  VL+F PH
Sbjct: 1   MKIIYNCE--QGIKDNV---ALTFGNFDGVHLGHKFAISNLKKVAQERGLPSAVLTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++ S +  F L     +++++   G   L    F    +  S + FI K+LV+    
Sbjct: 56  PSTVLFSRNN-FRLIDQEQKKELISSYGIDYLYIINFNRGFSEVSCDDFIGKILVKKYGA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G    FG  R G+   L+K  + Y +    ++ L  ++    SSS IR  L KG 
Sbjct: 115 KHITVGESCTFGHKRLGNILTLEKYSQVYEYSLTKLEPLIIDRKICSSSS-IRECLQKGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRT--QDQ 235
           +  A  LLG  + +   V  G   GR +GFPT N+ +   ++  K G Y  +        
Sbjct: 174 IEIANKLLGRSYQVSGIVTKGACRGREIGFPTINIPIEDYMIKPKLGTYYAKVAFSENSS 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           +   GV N G  PT       ++E  IFDF++ +Y  +  +    ++R E KF  I +L 
Sbjct: 234 SWLYGVVNIGMRPTFKDLKKPIVEMHIFDFNENVYNFKVDIQLLKFIRAEKKFHSINELT 293

Query: 296 IYMGEDEKKARKI 308
             +  D  KA ++
Sbjct: 294 KQIDRDIMKAYQL 306


>gi|123969004|ref|YP_001009862.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. AS9601]
 gi|123199114|gb|ABM70755.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. AS9601]
          Length = 307

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/301 (30%), Positives = 156/301 (51%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  +++  ++    +P    SF PHPR ++     +  L
Sbjct: 7   PSEVKSPTSIAIGSFDGLHAGHRQLIKSVVEENQYTPTIA-SFWPHPREVLYKEMRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P+ +  ILE +G   L+   F +E +  SAE+F++ +L+  L+ K +  G  F+FG  
Sbjct: 65  DLPNEKLSILEDLGIEQLVLIPFDIELSKLSAERFVRDILINQLQAKNISVGANFKFGFR 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   ++   +        I  L +   + +SSS IR  L K  + NA  +L   ++ 
Sbjct: 125 RSGDINTIKNMIKDTDIKLKIIPILEDKDGR-ISSSRIRNLLEKSDLNNAFKILNRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
              V+ G+ IG+++G+PTAN+++     L  EGVYA     ++       V N G  PT+
Sbjct: 184 NGKVVKGKGIGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNKKIESVMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + +   ++YG   +V   + LR +IKFK+I++L   +  D   A KI +
Sbjct: 244 NPLLPSAVEVHLINKDIDLYGLNLSVEPVEKLRSQIKFKNIDQLSNQIKIDRDNALKIFK 303

Query: 311 S 311
           +
Sbjct: 304 N 304


>gi|257066120|ref|YP_003152376.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii DSM
           20548]
 gi|256798000|gb|ACV28655.1| riboflavin biosynthesis protein RibF [Anaerococcus prevotii DSM
           20548]
          Length = 319

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 173/318 (54%), Gaps = 10/318 (3%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS 65
           ++N  LP  L+   V++GNFDG+HLGH  +++  ++I+    +  +VL F  + +  ++ 
Sbjct: 9   DLNMDLP-DLEKKAVSLGNFDGVHLGHQKLMKNNLEISKKYDLEPSVLLFKENTKLRLKD 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 ++    + +IL +MG +      F  +  N S  +FI +++ + L    VI G 
Sbjct: 68  EK--EYMTSLEDKIEILAEMGINTFCLIDFDEKFMNLSPREFIAEIINKKLNASFVICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFG+  +G+   L+K  ++Y + T  ++  + ++   +SS++IR  + +G++     L
Sbjct: 126 DYRFGRKASGNIETLRKLEDEYDYKTSVVEFEKEDEVNKISSNHIRDLIREGNISKVNKL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANF 244
           LG  + I+  V+ G K GRTL FPTAN++LS   +L  +GVY  +      + Y  ++N 
Sbjct: 186 LGRNYKIKGRVVDGAKRGRTLNFPTANLKLSFNYVLPVDGVYFTKVNIDGASFY-ALSNV 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT        +E++I DF+Q IYG+  ++ F ++ R +IKF   E L   M  D+KK
Sbjct: 245 GTNPTF-DESYRKVETYILDFNQNIYGKDISIEFVEFFRYDIKFDSKEALIEQMNSDKKK 303

Query: 305 ARKILESSYPLSERDRII 322
           A + LE+   L  +D ++
Sbjct: 304 AYEYLEN--ILQNKDELV 319


>gi|255003475|ref|ZP_05278439.1| riboflavin kinase / FAD synthetase protein [Anaplasma marginale
           str. Puerto Rico]
          Length = 323

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 18/326 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +  E  +++        +  GNFDGIHLGH  I  +  + A     P  VL+F+PH
Sbjct: 1   MEVLYGHEGKEAV-------ALTFGNFDGIHLGHVQIFAELTRRAAELSLPAAVLTFSPH 53

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               ++     F L     + +++E  G   L   +F  E A  S + FI  VLV   + 
Sbjct: 54  TAAFLRQRKN-FLLVDFEHKVELIEACGVDYLYVVEFGQEFAQLSPDAFIHNVLVGGCKA 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V+ G    FG   AG+   L+      G+    + +   +  +  SSS IR  L  G 
Sbjct: 113 RHVVVGKDCVFGHKCAGNLKSLELHAATCGYGVTGVPQYMVD-GRACSSSRIRECLQLGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG R  +   V+ G   G+ +GFPT N+ +   +L K GVY  R R      +
Sbjct: 172 IETANLLLGRRHVVSGRVLKGRGRGKLIGFPTLNLSMDHTVLPKNGVYHARVRFGGNNYW 231

Query: 239 -SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             GV N G  PT       LLE  +FDF  ++YG+   V    +LRPE KF ++++L   
Sbjct: 232 LPGVVNIGTRPTFAEEICPLLEMHVFDFDDDVYGKWADVELISFLRPERKFHNVDQLVR- 290

Query: 298 MGEDEKKARKILESSYPLSERDRIIC 323
                 +AR I   +  L    R++C
Sbjct: 291 -----HRARHIPRKAKALVAHLRLLC 311


>gi|332686761|ref|YP_004456535.1| riboflavin kinase/ FMN adenylyltransferase [Melissococcus plutonius
           ATCC 35311]
 gi|332370770|dbj|BAK21726.1| riboflavin kinase/ FMN adenylyltransferase [Melissococcus plutonius
           ATCC 35311]
          Length = 317

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V      +  L    +  V+ +G FDGIH GH  +++  + I       + V++FN H
Sbjct: 1   MKVIPIHHPHDPLQLLTEEVVMVLGFFDGIHKGHQKVIQTGREIAKKRGLKLAVMTFNQH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  I Q   P  +  L+    +EK +  +G   L    FT E +  S ++F+ + +V+ L
Sbjct: 61  PAIIFQRKMPTEVTYLTNLEEKEKRMADLGVDILYIVDFTEEFSKLSPQEFVDEYIVD-L 119

Query: 117 EVKTVITGTKFRFGK--DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             K  + G  + +G          IL K   K  F  V +DE    +++ +SS+ IR  +
Sbjct: 120 HTKVAVAGFDYTYGHGTKEETSVEILPKY-AKNRFEIVIVDE-ELLENEKISSTKIRLLM 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ 233
            +G +L  A  LG+ +T    V+HG+  GR LGFPTAN+Q+   + L K GVYA+R +  
Sbjct: 178 QEGDMLGVAKRLGHFYTTTGIVVHGDARGRLLGFPTANVQVDSSVYLPKNGVYAVRMKVG 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D   Y G+ + G N T   N  L +E  IF F+Q IY ++  V + DYLR +I+F++I+ 
Sbjct: 238 D-IWYLGMGSIGHNDTFGSNRKLTVEINIFHFNQMIYDEKVIVEWHDYLRNQIQFENIDA 296

Query: 294 LKIYMGEDEKKARKIL 309
           L   + +D+       
Sbjct: 297 LVQQLNQDKNDTLHYF 312


>gi|157413831|ref|YP_001484697.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9215]
 gi|157388406|gb|ABV51111.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9215]
          Length = 307

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/301 (30%), Positives = 160/301 (53%), Gaps = 6/301 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  +++  ++    +P T+ SF PHPR ++     +  L
Sbjct: 7   PSEVKSPTSIAIGSFDGLHAGHRQLIKSVVEENQYTP-TIASFWPHPREVLYKEMRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P+ +  ILE +G   L+   F ++ +  SAE+F++ +L+  L+ K +  G  F+FG  
Sbjct: 65  DLPNEKLSILEDLGIEQLVLIPFDMKLSKLSAERFVRDILINQLQAKNISVGANFKFGFR 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R+GD   ++   +        I  L + + + +SSS IR  L K  + NA  +L   ++ 
Sbjct: 125 RSGDINTIKNIIKDTDIKLKIIPILEDKEGR-ISSSRIRDLLEKSDLKNAFKILNRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
              V+ G+ IG+++G+PTAN+++     L  EGVYA     ++       V N G  PT+
Sbjct: 184 NGRVVKGKGIGKSIGWPTANLEIDGRKFLPGEGVYASWTTIENSNKKIESVMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + +   ++YG   +V   + LR +IKFK+I++L   + +D   A KI +
Sbjct: 244 NPLLPSAVEVHLINKDIDLYGLNLSVEPVEKLRSQIKFKNIDQLSNQIKKDRDNALKIFK 303

Query: 311 S 311
           +
Sbjct: 304 N 304


>gi|300773863|ref|ZP_07083732.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760034|gb|EFK56861.1| possible FAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 327

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 100/331 (30%), Positives = 155/331 (46%), Gaps = 26/331 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ N++  + L       VV IG FDG+H+GH  IL    + A   N    +L+F PH
Sbjct: 1   MKIYRNLDDFEPLDC----AVVTIGTFDGVHIGHQKILSHLKESAKKINGETVLLTFFPH 56

Query: 59  PRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR II        L +    +   L   G   LI   FT + +N + E++I  VL+  L 
Sbjct: 57  PRLIINPDDDSLRLINDIEEKVCHLANAGIDHLILTPFTRDFSNQTPEEYISNVLIGKLG 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G    FGKDR G    L+   E + +    I E ++     VSS+ IR +L KG
Sbjct: 117 TKKIVIGYDHHFGKDRKGSLVELEHFAEIFDYTVEQIPE-QDINDVAVSSTRIRESLIKG 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQD- 234
           ++  A   LGY F +   VI G++IGRT+GFPTAN+ +     ++   G+YA+     D 
Sbjct: 176 NIDTANQYLGYPFELTGTVIRGDQIGRTIGFPTANLHVHEKHKLIPAYGIYAVEVEIFDK 235

Query: 235 --------------QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
                              G+   G  PT+       +E  +FDF+++IYG+   V F  
Sbjct: 236 IEEVLTGQYTEKVPFRKAKGMGYIGTRPTV-DGMTRNIEVSLFDFNEDIYGKTLKVKFLH 294

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           ++R + +F+ IE +K  +  D+K        
Sbjct: 295 FVRHDERFETIEIMKEQIQADKKYITAYFAD 325


>gi|314923880|gb|EFS87711.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL001PA1]
 gi|314966063|gb|EFT10162.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL082PA2]
 gi|314981896|gb|EFT25989.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA3]
 gi|315090760|gb|EFT62736.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL110PA4]
 gi|315095009|gb|EFT66985.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL060PA1]
 gi|315104234|gb|EFT76210.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL050PA2]
 gi|327328058|gb|EGE69827.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL103PA1]
          Length = 336

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 94/312 (30%), Positives = 152/312 (48%), Gaps = 14/312 (4%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H+   N S+P   +   V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++ 
Sbjct: 33  HHRLPNVSVPE--ESSTVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVA 90

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                  L     + + L+  G S +    FT E A+++   F+ +V +  L+ + V+ G
Sbjct: 91  PDQAPALLCSLERRIEWLKDAGASEVRVVNFTTEIASWAPAAFVDRV-LGPLQPRHVLVG 149

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+   G    L     ++G   V   +L       VSS+ +R  +  G V  AA 
Sbjct: 150 QNFRFGRHAVGTPDAL----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAE 205

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYS 239
           LLG  F +   V+ G++ GR LGFPTAN+ +  D  +  +GVYA                
Sbjct: 206 LLGRPFEVGGVVVMGDQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLP 265

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NPT        +E+++ D    E+YG    V+F + LR +IKF  IE L   M
Sbjct: 266 SAISVGTNPTFDGV-ERRVETYVIDRDDLELYGVDIAVTFAERLRGQIKFDGIEPLISQM 324

Query: 299 GEDEKKARKILE 310
            +D + A+++L 
Sbjct: 325 ADDVETAKRVLS 336


>gi|269219593|ref|ZP_06163447.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269210835|gb|EEZ77175.1| riboflavin biosynthesis protein RibF [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 331

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 143/312 (45%), Gaps = 11/312 (3%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQ 64
               + +P+ L G  V IG FDG+H GH  +L + ++ A    +    L+F+PHP ++  
Sbjct: 6   WRKPEDIPSGLVGTAVTIGVFDGVHKGHRAVLRETVRQAKERGLVSVALTFDPHPASV-H 64

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           S+  +  +S    +   L   G  A+   ++TL+ A  +  +F +  LV  L  + V+ G
Sbjct: 65  SAQNVHLVSTLEDRIDRLAAAGIDAVYVQRYTLDYARATPREFFENQLVGELRARVVVVG 124

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              RFG    GD  +L + GE+ G     + +L   + +  SS+ +R  L  G V  AA 
Sbjct: 125 EDVRFGFRNEGDGAVLAELGEEKGVDVTLVSDLAAPEGRRWSSTWVRELLAAGDVAGAAR 184

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ-----DQTSY 238
           +LG R  I  +V+HG + GR +GFPTAN+       +  +GVYA                
Sbjct: 185 VLGRRHRIRGEVVHGFQRGRAIGFPTANLAGDDLGEVPADGVYAGWLVRSVEGSCAAEYL 244

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP         +E  +       +YG+   V F +YLRP + F  +E L   
Sbjct: 245 PAAISVGTNPHF-EGTERTVEVHVLGRSDLNLYGESIAVDFVEYLRPMLSFDSLEGLLGQ 303

Query: 298 MGEDEKKARKIL 309
           M ED +   +IL
Sbjct: 304 MDEDLRNTAEIL 315


>gi|310828061|ref|YP_003960418.1| riboflavin biosynthesis protein RibF [Eubacterium limosum KIST612]
 gi|308739795|gb|ADO37455.1| riboflavin biosynthesis protein RibF [Eubacterium limosum KIST612]
          Length = 302

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 85/293 (29%), Positives = 150/293 (51%), Gaps = 6/293 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTL 72
           N  +  V+A+G FDG+HLGH  ++   IK A   N    V++F  HP T I  +   + +
Sbjct: 6   NPNEKIVLALGFFDGVHLGHQELINATIKKAKELNCASGVMTFAEHPLTHIFPAYSPWLI 65

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + ++++ +G   +    F  +   YS + FI+  L++   V  ++ G  + FG  
Sbjct: 66  TTNEEKVQVMKDLGIDYVFLNPFNDQLMCYSPKAFIRDYLLQKYNVAHIVVGFNYSFGFK 125

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             GD  +L + G+++ F    I        Q VSS+ IR  +  G V   +  LG  ++I
Sbjct: 126 GEGDIQMLTEFGKRFNFGVTVIPP-CIIDGQSVSSTLIRELIGTGKVNEVSTFLGRDYSI 184

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  ++ G+ +G T   PTAN+++   ++L   GVY  + + + Q  + G+ N G NPT  
Sbjct: 185 EGTIVKGKGLGHTFDIPTANLKMKEKVILPSSGVYYTKIKVRGQE-HDGLTNLGFNPTFE 243

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
            + P  +E++I+DF + IYG   T++F + +R EIKF ++  L   +  D + 
Sbjct: 244 KH-PYSIETYIYDFDENIYGDYVTLTFKERIRGEIKFDNLGDLVAQIKSDIRN 295


>gi|300813702|ref|ZP_07094022.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300512159|gb|EFK39339.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 302

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/293 (32%), Positives = 157/293 (53%), Gaps = 8/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++A+GNFDG+H GH  +LE  +KI         VL F  H  + + S +    L+  
Sbjct: 14  KNSIIALGNFDGVHKGHRKLLESTVKIAKEKKLKSAVLGFKSH-SSNMYSENKKKILTTN 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + KI   +G   +    F+ E  + S  +F++  L E L+VK ++ G  + F   +AG
Sbjct: 73  TSKFKIFSDLGIDIVYLIDFSKEFMSMSPMEFLKDFLQEKLKVKGLVVGYDYTFAYKKAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++    Y F+ + I E +  + Q +SSS IR  +++G +  A  LL   FT+   
Sbjct: 133 DVNYLKEHS--YLFNWLDIIEEQTWQGQAISSSLIRKLISEGKIKEANFLLDSNFTVMGK 190

Query: 196 VIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIH + +G+ +G+PTAN++L    I+ + GVY       D   Y    + G NPT+  +G
Sbjct: 191 VIHNKGLGQKMGYPTANLELCDNYIIPRYGVYDTDI-IVDGKKYKAATSVGTNPTVEDDG 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            + +E+ I +F+  IYG+   + F D++RPE+ FK+I++L   +  D KK R+
Sbjct: 250 -IKIEAHILNFNDNIYGKTVELIFLDFIRPELVFKNIDELFKQINLDVKKVRE 301


>gi|300214377|gb|ADJ78793.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius CECT 5713]
          Length = 318

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +    E            V+A+G FDG+H GH  ++++AI+        + V++F+ H
Sbjct: 1   MKIVKLKEPYDKNAIVDSPIVLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ I Q+        L+    + +  + +G       KF    A  S + FI K +V  L
Sbjct: 61  PKIIFQNIDGEKFKYLTMLDEKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ G  + +GK    +   +    +   F  + +D L+ N  Q +SS+ IR  L  
Sbjct: 120 HAICVVAGQDYTYGKHDIANMDTISDFAKGR-FEIITVDHLQRNN-QKISSTQIRKDLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ-D 234
           G+V  A  LLGY++     V HG K GR +GFPT N+ +   + +L EGVYA++ +   D
Sbjct: 178 GNVEAANLLLGYQYENHGTVEHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            + Y G+A+ G N T   +    +E  +F+F + +YG++  V ++ +LR  +KF  +E+L
Sbjct: 238 NSWYEGMASIGHNETFGDDLEKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEEL 297

Query: 295 KIYMGEDEKKARKIL 309
              + +D++      
Sbjct: 298 IDQLNKDKRDTEVFF 312


>gi|294782069|ref|ZP_06747395.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 1_1_41FAA]
 gi|294480710|gb|EFG28485.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 1_1_41FAA]
          Length = 318

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 8/295 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLS 73
             +   VAIGNFDG+H GH  ++ + IK A        V +F  HP   +        ++
Sbjct: 13  EFEDTYVAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFPERKFDYIN 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +LE +G   +I  K       Y+  +F++ +L   L+VK +  G  F FGK  
Sbjct: 73  TNEEKLYLLESLGVDVVIMQKLDKNFLEYTPLEFVR-ILKNKLKVKEIFVGFNFSFGKGG 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    L+   E +      +  +     ++VSSS IR  +       A  LL +   + 
Sbjct: 132 LGTAEDLEYLAEVHNIKVNELPPV-TLDGELVSSSAIRKKIANSDFDGAIKLLDHPMIVI 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--TSYSGVANFGRNPTMV 251
            +VIHG+KI R LGFPT N+++   +    G+Y    +  D+      GV N G NPT+ 
Sbjct: 191 GEVIHGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTLK 250

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               + LE  I DF +E+YG++  +    ++R E KF  I++LK  +  D  + +
Sbjct: 251 --QEMSLEVHILDFDREVYGEKLYIQIVKFMREEKKFSSIDELKATIQADVDRWK 303


>gi|269956015|ref|YP_003325804.1| riboflavin biosynthesis protein RibF [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304696|gb|ACZ30246.1| riboflavin biosynthesis protein RibF [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 330

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 22/330 (6%)

Query: 1   MHVFHNIEINQSL------PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-- 52
           M V+H++                   VV IGNFDG+H GH  +L + + +A         
Sbjct: 1   MQVWHDLAQAVEAFAVGVGDGGHTSAVVTIGNFDGVHRGHQAVLGRVVGLARADDRAAVA 60

Query: 53  LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           L+F+PHP  + +  +    L+  + +  ++ + G   ++   +TLE A  + ++F+ + L
Sbjct: 61  LTFDPHPAQVHRPDAAPELLTGLTDKLALMAETGLDGVLVVPYTLELAALTPDEFVTRYL 120

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL------RNNKSQIVS 166
           VE L  +TV+ G   RFGKD +G+   +   G  +GF  V +D++          S   S
Sbjct: 121 VEALRARTVVVGHDVRFGKDNSGNLASMVDLGGVHGFEVVAVDDIGLSRLRTPGGSARWS 180

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           SS  R  L +G V  AA +LG    +   V+HG+  GR LGFPTAN+     ++  +GVY
Sbjct: 181 SSAARLLLAEGDVAGAAAILGRPHRLRGVVVHGDARGRLLGFPTANLGRISGMVPADGVY 240

Query: 227 AIRFRTQD------QTSYSGVANFGRNPTMVPNGPLLLESFI-FDFSQEIYGQRCTVSFF 279
           A R                   + G NPT        +E+++      ++Y +   V   
Sbjct: 241 AGRLLRPSLDDAHPDRDLPAAVSVGTNPTFDGV-DRRVEAYVLDRDDLDLYDEEVVVELV 299

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           D LRP ++F  ++ L   M +D  +AR IL
Sbjct: 300 DRLRPTLRFDGVDALVAQMHDDVDRARGIL 329


>gi|256824996|ref|YP_003148956.1| FMN adenylyltransferase /riboflavin kinase [Kytococcus sedentarius
           DSM 20547]
 gi|256688389|gb|ACV06191.1| FMN adenylyltransferase /riboflavin kinase [Kytococcus sedentarius
           DSM 20547]
          Length = 290

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 11/291 (3%)

Query: 30  IHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           +H GH  +L + +    +++    VL+F+PHP  ++        +     + + LE+ G 
Sbjct: 1   MHRGHRAVLARLVDEARSHDLASIVLTFHPHPLEVLHPERAPEAICSLEQRLEHLERAGV 60

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
             ++   FT E A  S  +F+ +  V    ++ ++ G   RFG+  AG    L++ GE+ 
Sbjct: 61  DVVVAQAFTHELAAQSPREFVTETYVRNFGMRRIVVGRDSRFGRHNAGTVDTLRELGEEL 120

Query: 148 GFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLG 207
           GF  V ++++ +  +   SS+ +RTAL +G +  A+  LG    +   V+HGE+ GR LG
Sbjct: 121 GFDVVVLEDVGDPATTRWSSTAVRTALGQGRIDAASEHLGRPHCVRGTVVHGERRGRELG 180

Query: 208 FPTANMQLSPD-ILLKEGVYAIR------FRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           FPTAN+    + ++  +GVYA             +       + G NPT        +E+
Sbjct: 181 FPTANLSADAEGMVPADGVYAGWLVRDTLPEGDPERRQPAAISVGSNPTF-DAHRRTVEA 239

Query: 261 FIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + D    ++YG+  T+ F + LR  ++++ IE L   M  D   AR++L 
Sbjct: 240 HVLDRTDLDLYGEPVTIEFVERLRGMVRYEGIEPLIEQMRADVSAAREVLS 290


>gi|90961551|ref|YP_535467.1| riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius UCC118]
 gi|90820745|gb|ABD99384.1| Riboflavin kinase / FMN adenylyltransferase [Lactobacillus
           salivarius UCC118]
          Length = 318

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +    E            V+A+G FDG+H GH  ++++AI+        + V++F+ H
Sbjct: 1   MKIVKLKEPYDKNAIVDSPIVLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ I Q+        L+    + K  + +G       KF    A  S + FI K +V  L
Sbjct: 61  PKIIFQNIDGEKFKYLTMLDEKLKHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ G  + +GK    +   +    +   F  + +D L+ N  Q +SS+ IR  L  
Sbjct: 120 HAICVVAGQDYTYGKHDIANMDTISDFAKGR-FEIITVDHLQRND-QKISSTQIRKDLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ-D 234
           G+V  A  LLGY++     V HG K GR +GFPT N+ +   + +L EGVYA++ +   D
Sbjct: 178 GNVEAANLLLGYQYENHGTVEHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y G+A+ G N T   +    +E  +F+F + +YG++  V ++ +LR  +KF  +E+L
Sbjct: 238 NLWYEGMASIGHNETFGDDLEKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEEL 297

Query: 295 KIYMGEDEKKARKIL 309
              + +D++      
Sbjct: 298 IDQLNKDKRDTEVFF 312


>gi|319938941|ref|ZP_08013305.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           1_2_62CV]
 gi|319811991|gb|EFW08257.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           1_2_62CV]
          Length = 310

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M     I+  + +   ++  V+ +G FDG+H GH  +  +A KIA   +  I VL+F   
Sbjct: 1   MKTIR-IKNEKDI-QQIEHTVLVLGYFDGLHKGHQALFAEARKIAAAKDLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  + + LE +G   L    FT + A  +AEQF  K  +  L
Sbjct: 59  PKLAFVRYQPSLMLHLTSPEERLQQLENLGVDYLYLVDFTSQFARNTAEQFFTKY-ISRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + KTVI G  + FG DR      L+K  E      + +  + N     +SS+ IR  +  
Sbjct: 118 KAKTVIAGFDYHFGSDRR-SAEDLEKLFEGQ---VIIVPSV-NFNGVKISSTRIRETVLA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  +  LLGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +     D 
Sbjct: 173 GNVAESNQLLGYSLSTSGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVE-HDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E+ IFDFSQ+IYG    + + D +R  +KF ++++L 
Sbjct: 232 QMYRGMASVGKNVTFEGD-ELRFEANIFDFSQDIYGDTIRIFWLDKIRDMVKFDNVDELV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ AR  
Sbjct: 291 KQLQVDKEIARYW 303


>gi|282882035|ref|ZP_06290676.1| riboflavin biosynthesis protein RibF [Peptoniphilus lacrimalis
           315-B]
 gi|281298065|gb|EFA90520.1| riboflavin biosynthesis protein RibF [Peptoniphilus lacrimalis
           315-B]
          Length = 302

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 8/293 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  ++A+GNFDG+H GH  +LE  +KI         VL F  H  + + S +    L+  
Sbjct: 14  KNSIIALGNFDGVHKGHRKLLESTVKIAKEKKLKSAVLGFKSH-SSNMYSENKKKILTTN 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +I   +G   +    F+ E  + S  +F++  L E L+VK ++ G  + F   +AG
Sbjct: 73  TSKFEIFSDLGIDIVYLIDFSKEFMSMSPMEFLKDFLQEKLKVKGLVVGYDYTFAYKKAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++    + F+ + I E +  + Q +SSS IR  +++G +  A  LL   FT+   
Sbjct: 133 DVNYLKEHS--FLFNWLDIIEEQTWQGQAISSSLIRKLISEGKIKEANFLLDSNFTVMGK 190

Query: 196 VIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIH + +G+ +G+PTAN++L    I+ + GVY       D   Y    + G NPT+  +G
Sbjct: 191 VIHNKGLGQKMGYPTANLELCDNYIIPRYGVYDTDI-IVDGKKYKAATSVGTNPTVEDDG 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            + +E+ I DF+  IYG+   + F D++RPE+ FK+I++L   +  D KK R+
Sbjct: 250 -IKIEAHILDFNDNIYGKTVELIFLDFIRPELVFKNIDELFKQINLDVKKVRE 301


>gi|159903858|ref|YP_001551202.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9211]
 gi|159889034|gb|ABX09248.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9211]
          Length = 305

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 151/295 (51%), Gaps = 5/295 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
              +A+G+FDG+H GH  ++++        P TV+SF PHPR ++   S +  L  PS +
Sbjct: 13  PTAIALGSFDGLHAGHKRVIKEITNSDKGVP-TVVSFWPHPREVLYGESRL-RLDLPSEK 70

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +LE +G   L+   F    A  +AE+F  +VL+  L+ K +  G  FRFGK+R GD  
Sbjct: 71  GALLETLGVKQLVLVPFDHYLAELTAEKFFNEVLINKLQSKRIAVGANFRFGKNREGDPY 130

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K  E        +  L + + ++ SSS IR+ L +G++     LLG  +     VI 
Sbjct: 131 VLKKLCESADLELSIVPILEDAQGRM-SSSRIRSELKQGNLKATKDLLGRPYIFRGLVIP 189

Query: 199 GEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFR-TQDQTSYSGVANFGRNPTMVPNGPL 256
           G+ +G+T+G+PTAN+Q+    LL   GVYA        +  +  V N G  PT+ P  P 
Sbjct: 190 GKGLGKTIGWPTANLQVDGRKLLPGIGVYAAWATKLNGKNKFPAVMNLGPQPTIDPLAPS 249

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E  + +   ++      +     +R + KFKD+  L   +G D K A++IL  
Sbjct: 250 AVEVHLLNQEIDLTQNELIIEPVKRIRSQKKFKDLNTLSEQIGLDAKIAQEILSK 304


>gi|322506233|gb|ADX01687.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii 1656-2]
          Length = 333

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 149/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KNYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 230 --FRTQDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD +   G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNSEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|162447669|ref|YP_001620801.1| bifunctional FAD synthetase/riboflavin kinase [Acholeplasma
           laidlawii PG-8A]
 gi|161985776|gb|ABX81425.1| bifunctional enzyme, FAD synthetase / riboflavin kinase
           [Acholeplasma laidlawii PG-8A]
          Length = 297

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 167/311 (53%), Gaps = 14/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   H     +S+ N+     + IGNFDG+H+GH  ++E+  K ++ +   V++F PHP 
Sbjct: 1   MKTIHT--TYESIKNNEPIT-LTIGNFDGLHIGHQNLIEKVKKFSD-TKSAVMTFFPHPM 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           ++I  +  +  L   S +E+ L+ M     +  +FT   +     +FI+ +  + L+VK 
Sbjct: 57  SVIT-NKELPILMDISDKERALKMMHVDIFMVVEFTKAFSKLEKLEFIEWL--KSLQVKR 113

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F+FG   +G    L++      F  + +++L    ++ VS++ I+  L +G + 
Sbjct: 114 IVVGRDFKFGHKGSGSVDDLKQH-----FEVLVVEDLLYKDTR-VSTTYIKLLLEQGDMK 167

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LL   ++I  +VIHG+K+G+ +G+PTAN+      L K GVYA+     D+T Y G
Sbjct: 168 LARKLLNKSYSIHGEVIHGDKVGKMIGYPTANIDYKNHFLPKIGVYAVIVEIGDKT-YLG 226

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            AN G NPT+  +    LE FI D+   +Y +  TVSF  YLR EIK+  +E +   + +
Sbjct: 227 CANLGHNPTINYSTTRRLEVFIMDYDGNLYEKEITVSFEYYLRDEIKYDKVEAMLEQIKK 286

Query: 301 DEKKARKILES 311
           D ++   +L+ 
Sbjct: 287 DVEQTYNLLKK 297


>gi|170017446|ref|YP_001728365.1| riboflavin biosynthesis protein RibF [Leuconostoc citreum KM20]
 gi|169804303|gb|ACA82921.1| Riboflavin biosynthesis protein RibF [Leuconostoc citreum KM20]
          Length = 316

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 11/318 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFN 56
           M +     ++  + N  +    VVA+G FDG+HLGH  ++++A   A+    P+ VL+++
Sbjct: 1   MTMIKTTTLHYPIQNFKQPVRQVVAMGFFDGVHLGHQAVIKRAKAEADALGVPLAVLTYD 60

Query: 57  PHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           PHP    ++ + P+  L+    + ++LE +G S + + +FT + A  S + F+ +VL++ 
Sbjct: 61  PHPSVAFKALTEPLKYLTVVKQKAQLLETLGVSEMYKMQFTSQLAGLSPQVFVDEVLMQ- 119

Query: 116 LEVKTVITGTKFRFGKD-RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L    V+ G    +G D    +   L     K  F  + + E  ++    + SS IR+AL
Sbjct: 120 LNPVAVVAGFDHLYGSDKNQANMANL-AIYAKARFDVIIVPEF-DDLGLKIGSSKIRSAL 177

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ 233
             G +      LG  +     V+HGE  GR LGFPTAN+     + L   G+YA++    
Sbjct: 178 CVGDMQTVNRQLGRIYHTTGIVVHGEARGRELGFPTANVLTPELEWLPGIGIYAVKISIA 237

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            Q  + G+A+ GRN T   N P+ +E  I DF+Q IYG+  TV++  +LR E+KF  ++ 
Sbjct: 238 GQ-WHIGMASIGRNVTFGDNRPITVEINILDFNQTIYGEDVTVAWHHHLRGEVKFNQVDD 296

Query: 294 LKIYMGEDEKKARKILES 311
           L   + +D+   R   E+
Sbjct: 297 LITQLEKDKVATRTYFET 314


>gi|332295457|ref|YP_004437380.1| riboflavin biosynthesis protein RibF [Thermodesulfobium narugense
           DSM 14796]
 gi|332178560|gb|AEE14249.1| riboflavin biosynthesis protein RibF [Thermodesulfobium narugense
           DSM 14796]
          Length = 307

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 8/290 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FD +HLGH L+ +Q  K+  N    I+V++F PHPR   +S   +  ++    + 
Sbjct: 17  LTIGTFDSVHLGHQLLFKQLKKMRKNKEDLISVVTFEPHPRIFFKSIENLSLITIIEERI 76

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L +     +I  +F    +  + E+FI  +   + ++ T++ G  F FG+ + GD  +
Sbjct: 77  RLLLEH-VDEVIVLQFDELLSKLTPEEFINFLCSNF-KINTIVEGENFHFGRGKGGDVNL 134

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++ G ++GF+    + L       +SSS IR  +  G +  A  LLG+ F +  +VIHG
Sbjct: 135 LKELGNRFGFNVDVAN-LYIFDGVPISSSRIRRLIISGKIDEANKLLGWEFFVSGEVIHG 193

Query: 200 EKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           ++IG  LGFPTAN++L    I+ + GVY+          Y G  N G  PT+       +
Sbjct: 194 DRIGTFLGFPTANLRLPEYKIVPQSGVYSAEVEIAG-ERYLGALNIGIKPTV-GGKKRSI 251

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           E  + +F   +Y +  TV F   +R EIKF  I  LK  +  D     KI
Sbjct: 252 EVHVINFEGNLYQEVITVYFKSKIRDEIKFDSIAALKKQIKLDIDNIVKI 301


>gi|227890639|ref|ZP_04008444.1| FAD synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867577|gb|EEJ74998.1| FAD synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 318

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 9/315 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +    E            V+A+G FDG+H GH  ++++AI+        + V++F+ H
Sbjct: 1   MKIVKLKEPYDKNAIVDSPIVLALGFFDGVHRGHQEVIKRAIEKGKSLGVKVAVMTFDRH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ I Q+        L+    + +  + +G       KF    A  S + FI K +V  L
Sbjct: 61  PKIIFQNIDGEKFKYLTMLDEKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDKYVV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ G  + +GK    +   +    +   F  + +D L+ N  Q +SS+ IR  L  
Sbjct: 120 HAICVVAGQDYTYGKHDIANMDTISDFAKGR-FEIITVDHLQRND-QKISSTQIRKDLDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ-D 234
           G+V  A  LLGY++     V HG K GR +GFPT N+ +   + +L EGVYA++ +   D
Sbjct: 178 GNVEAANLLLGYQYENHGTVEHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVKVKIDKD 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y G+A+ G N T   +    +E  +F+F + +YG++  V ++ +LR  +KF  +E+L
Sbjct: 238 NLWYEGMASIGHNETFGDDLEKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKFDSVEEL 297

Query: 295 KIYMGEDEKKARKIL 309
              + +D++      
Sbjct: 298 IDQLNKDKRDTEVFF 312


>gi|169632049|ref|YP_001705785.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii SDF]
 gi|169797771|ref|YP_001715564.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter baumannii AYE]
 gi|184156363|ref|YP_001844702.1| FAD synthase [Acinetobacter baumannii ACICU]
 gi|213155431|ref|YP_002317476.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB0057]
 gi|215485120|ref|YP_002327361.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB307-0294]
 gi|239503749|ref|ZP_04663059.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB900]
 gi|301347568|ref|ZP_07228309.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB056]
 gi|301510773|ref|ZP_07236010.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB058]
 gi|301596563|ref|ZP_07241571.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB059]
 gi|332855722|ref|ZP_08436018.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013150]
 gi|332866679|ref|ZP_08437141.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013113]
 gi|332873533|ref|ZP_08441482.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6014059]
 gi|169150698|emb|CAM88608.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter baumannii AYE]
 gi|169150841|emb|CAO99444.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter baumannii]
 gi|183207957|gb|ACC55355.1| FAD synthase [Acinetobacter baumannii ACICU]
 gi|213054591|gb|ACJ39493.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB0057]
 gi|213987942|gb|ACJ58241.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           AB307-0294]
 gi|323516109|gb|ADX90490.1| FAD synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727308|gb|EGJ58748.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013150]
 gi|332734448|gb|EGJ65563.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6013113]
 gi|332738230|gb|EGJ69108.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii
           6014059]
          Length = 333

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KNYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 230 --FRTQDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|289426518|ref|ZP_06428261.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK187]
 gi|289153246|gb|EFD01964.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           SK187]
          Length = 298

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 91/297 (30%), Positives = 147/297 (49%), Gaps = 12/297 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++        L     + 
Sbjct: 8   STVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALLCSLERRI 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L+  G S +    FT E A+++   F+++V +  L+ + V+ G  FRFG+   G    
Sbjct: 68  EWLKDAGASEVRVVNFTTEIASWAPAAFVERV-LGPLQPRHVLVGQNFRFGRHAVGTPDA 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L     ++G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G
Sbjct: 127 L----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVVMG 182

Query: 200 EKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYSGVANFGRNPTMVPNG 254
           ++ GR LGFPTAN+ +  D  +  +GVYA                   + G NPT     
Sbjct: 183 DQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTFDGV- 241

Query: 255 PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E+++ D    E+YG   TV+F + LR +IKF  IE L   M +D + A+++L 
Sbjct: 242 ERRVETYVIDRDDLELYGVDITVTFAERLRGQIKFDGIEPLISQMADDVETAKRVLS 298


>gi|260557769|ref|ZP_05829983.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii ATCC
           19606]
 gi|260408942|gb|EEX02246.1| riboflavin biosynthesis protein RibF [Acinetobacter baumannii ATCC
           19606]
          Length = 333

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 149/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KNYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI--------- 228
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVDVICETTSL 231

Query: 229 -RFRTQDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
            +   QD     G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDNPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|57234593|ref|YP_181344.1| riboflavin biosynthesis protein RibF [Dehalococcoides ethenogenes
           195]
 gi|57225041|gb|AAW40098.1| riboflavin biosynthesis protein RibF [Dehalococcoides ethenogenes
           195]
          Length = 305

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 8/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  ++ IG FDG+HLGH  ++ +  K     N    +++F  HP  ++     I  +   
Sbjct: 15  QNTLITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDD-IKLILSL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L +MG   +I   FT E +  SA  F+  + ++ L +K ++ G+ F  G++RAG
Sbjct: 74  EERNLALSQMGLDQIIMLSFTPEISTVSATDFVGYL-LDHLHMKGIVVGSDFALGRNRAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++      F    +  +   ++QIVSS+ IR AL  G+V  A  +LG  + I   
Sbjct: 133 DATALRRLSHIMDFSVSVVSPVVI-ENQIVSSTAIRRALLSGNVSKARLMLGRNYHIRGT 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V +G   G  LGFPTAN+ L   + L  +GVYA +     +  Y+ VAN G  PT     
Sbjct: 192 VQNGANRGTKLGFPTANLTLPGYLALPADGVYAAKA-FLGEKEYNAVANIGSCPTF-GQE 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              LE  + DF+ +I GQ   V F ++LRPEI F D E LK  +  D  KAR IL 
Sbjct: 250 EHRLEVHLLDFAGDIRGQVLKVEFVEFLRPEICFADAEALKTQISADISKARDILR 305


>gi|254456521|ref|ZP_05069950.1| riboflavin biosynthesis protein RibF [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083523|gb|EDZ60949.1| riboflavin biosynthesis protein RibF [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 307

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 5/304 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           +  N ++  + K  ++ IGNFDG+HLGH  + + A       N  I V++F+P P+    
Sbjct: 4   LYKNFNINKNHKQSIILIGNFDGVHLGHQKLFKLAQSYKKKYNLKIGVINFDPMPKMFFN 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            S   F LS    +  +L   G   +I  +F    +   +  F++ +L + L  + +   
Sbjct: 64  RSLTNFRLSSIDQKLVLLNNQGVDFIITKQFDKIFSKTKSINFVKNILSQKLNARFIFVS 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG  R GD  +L +  +++ F  V   +    K +IVSSS IR+ L +G +  A  
Sbjct: 124 NNFRFGNKREGDVNLLIQNEKRFNFKVVK-PKPLLLKKKIVSSSLIRSYLERGFLKEANK 182

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVAN 243
           LL   ++IE  V  G +IG+ +GFPT N+ +   +L K GVYA++   ++ T Y  G+AN
Sbjct: 183 LLNRNWSIEGIVQKGRQIGKKIGFPTCNIDIGDYVLAKPGVYAVKVLRKNNTKYIKGIAN 242

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT      +LLE  +F+FS  +Y +  +V F  ++R E KFK++ +LK  +  D  
Sbjct: 243 LGYRPTFNQ-KKILLEVHLFNFSGNLYNKYLSVEFLKFIRKEKKFKNVNQLKNQIKNDLS 301

Query: 304 KARK 307
            A+K
Sbjct: 302 IAKK 305


>gi|226323223|ref|ZP_03798741.1| hypothetical protein COPCOM_00995 [Coprococcus comes ATCC 27758]
 gi|225208413|gb|EEG90767.1| hypothetical protein COPCOM_00995 [Coprococcus comes ATCC 27758]
          Length = 310

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M     +E  Q      +   + +G FDG+H GH  ++++   +K        V +F+ +
Sbjct: 1   MDYIRGLEAYQD----SREAAITLGKFDGVHRGHQKLIKKVCQLKAKKGVRSVVFAFDMN 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    +       +     +  +L++     L+   F+ +  + SAE FI+K+L+E +  
Sbjct: 57  PL-YEKLGKSREGIMSNEERRCLLDE-KVDVLLECPFSEDVTSMSAEDFIRKILIEKIHA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ GT F FG D+ GD  +L +  + YG+    I++    K + +SSS +R  L KG+
Sbjct: 115 RYIVIGTDFHFGHDKRGDAKMLAEYADVYGYELFVIEKEMYGKRE-ISSSYVREELRKGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           +     +LGY +T+   V HG ++GR LGFPT N+  S D +L   GVY    R  D   
Sbjct: 174 MEAVNDMLGYAYTVRGKVEHGRQLGRKLGFPTLNVHPSRDKLLPPNGVYLDSVRI-DGIW 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G+ N G  PT+     +L+ES + D+S + YG+   +  + + RPE KF+ +E +K  
Sbjct: 233 YNGIGNVGFKPTVSDENRMLIESNLLDYSGDAYGKEVEIQLYHFKRPEQKFESVEMMKAQ 292

Query: 298 MGEDEKKARKILE 310
           + +D   A++   
Sbjct: 293 IDQDIAYAKEFFR 305


>gi|291448155|ref|ZP_06587545.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
 gi|291351102|gb|EFE78006.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptomyces roseosporus NRRL 15998]
          Length = 312

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/280 (32%), Positives = 135/280 (48%), Gaps = 9/280 (3%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII 63
                + +P      VV IG++DG+H GH LI+ +A++ A     P  V++F+PHP  ++
Sbjct: 27  RWRGLEDIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGIPSVVVTFDPHPSEVV 86

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +  S    L+P   + ++  ++G  AL+   FT E +  S   FI KVLV+ L  K VI 
Sbjct: 87  RPGSHPPLLAPHHRRAELTAELGVDALLILPFTAEFSKLSPADFIAKVLVDRLHAKAVIE 146

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALTKGHVL 180
           G  FRFG   AG+  +L + G  Y +    ID          Q  SS+  R  + +G V 
Sbjct: 147 GPNFRFGHKAAGNVALLTELGATYDYTVEVIDLYVTGEAGGGQPFSSTLTRRLIAEGDVA 206

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYS 239
            AA +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA      D  S  
Sbjct: 207 GAAEILGRPHRVEGIVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLEV-DGESMP 265

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
              + G NP         +E++  D    ++YG    V F
Sbjct: 266 AAISVGTNPQF-DGTERTVEAYAIDRVDLDLYGLHVAVDF 304


>gi|262281443|ref|ZP_06059224.1| riboflavin kinase [Acinetobacter calcoaceticus RUH2202]
 gi|262257269|gb|EEY76006.1| riboflavin kinase [Acinetobacter calcoaceticus RUH2202]
          Length = 333

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    Q       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFQGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSATEFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KDYGFGVTNLHTI-ELEGERVSSTRIRQVLQAG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 230 --FRTQDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDAPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D  + R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVHQLRQY 324


>gi|325124002|gb|ADY83525.1| bifunctional protein ribF [Acinetobacter calcoaceticus PHEA-2]
          Length = 333

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/333 (27%), Positives = 146/333 (43%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q   I  A      V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKNIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDEHFRSMSASEFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KDYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---- 233
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +    +    
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 234 -----------------DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                             + S  G  + G  P +    P   LE    D S  +YG    
Sbjct: 232 TEKVRQETPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|239626264|ref|ZP_04669295.1| riboflavin biosynthesis protein RibF [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520494|gb|EEQ60360.1| riboflavin biosynthesis protein RibF [Clostridiales bacterium
           1_7_47FAA]
          Length = 326

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/297 (30%), Positives = 151/297 (50%), Gaps = 7/297 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  +V +G FDG H GH  +L    ++      P  + +F+  P T + S  P   ++  
Sbjct: 14  EPTIVTLGKFDGRHRGHQKLLRTMKELKQELGYPTAIFTFSIAPLTQM-SGQPQTVITTN 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   +E+MG   L+ Y F  E      E F++ +L   +  + ++ G    FG   AG
Sbjct: 73  MERRANMERMGIDYLVEYPFNEEIRRMMPEDFVKDILAGRMGAREIVVGPDCSFGYQGAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  +L+   ++ G+H   I++ +++  + +SS+ IR  L KG+V  A  LLG  ++I   
Sbjct: 133 NAELLKHMEKELGYHLHVIEKEKDH-MRDISSTYIREELEKGNVEKANALLGEPYSIHGK 191

Query: 196 VIHGEKIGRT-LGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG  IG + LGFPTAN++      L + GVY  R    D   Y GV N G+ PT+   
Sbjct: 192 VVHGNHIGSSILGFPTANLEPPAIKRLPRFGVYVSRVLV-DNVYYRGVTNIGKKPTVEGQ 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P+ +E++IFD  ++IYG    V    + RPE KF  +E+LK  +  D++ A    E
Sbjct: 251 YPVGVETYIFDLDRDIYGDTIEVQLLAFDRPEQKFASLEELKHRIEMDKEFAAGYFE 307


>gi|291541805|emb|CBL14915.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus bromii
           L2-63]
          Length = 310

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 7/298 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
              VA+G FDG+H GH  ++  A++   N  +    +F   P+ ++  SS    L     
Sbjct: 13  NTAVALGFFDGLHKGHRRVILSAVEQKKNGLLPVCFTFAQSPKEVLGKSSKGA-LMTTED 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + K LE +G        F  +  N SA+ F++K++   L  K V+ G  + FGK+  GD 
Sbjct: 72  KLKTLESLGIEHTFSPDF-KKLMNMSAKDFVEKIIFGNLNAKFVVCGFNYHFGKNGEGDT 130

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+K  ++ G     I+  R++    VSS+ IR+ +++G++  A  LL   F   + + 
Sbjct: 131 DLLKKLCDENGTELKVIEPERDDGDV-VSSTLIRSLVSEGNIRRANKLLCSYFGFSAVIT 189

Query: 198 HGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG+++GR LG PT N +L  ++ + K GVYA     ++   Y GV N G  PT+     L
Sbjct: 190 HGKRLGRELGTPTINQKLPENLAVPKYGVYASAVTLENGKVYCGVTNIGVKPTV-GGTKL 248

Query: 257 LLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           L E+++ DF   EIYGQ   V   D++RPE KF +I +LK  + ++   A++I +  Y
Sbjct: 249 LSETWMPDFHGGEIYGQTADVRLLDFIRPEKKFDNITELKNAITDNAVTAKEIFDEMY 306


>gi|322436419|ref|YP_004218631.1| riboflavin biosynthesis protein RibF [Acidobacterium sp. MP5ACTX9]
 gi|321164146|gb|ADW69851.1| riboflavin biosynthesis protein RibF [Acidobacterium sp. MP5ACTX9]
          Length = 324

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 152/324 (46%), Gaps = 13/324 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M ++ ++     LP  L   V  IGNFDG+H GH  +++Q    A     P  +++F+PH
Sbjct: 1   MKIYRSL---SELPADLGPVVATIGNFDGVHRGHRWVIDQVNARARTLCLPSLLITFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +P   ++P   +  +L + G  A +   FT E +  +A QF + +  + + V
Sbjct: 58  PVRVLRPDAPHSLITPLEQKLALLGETGIDAALILPFTPELSRLTARQFAEILAND-IHV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  FRFG         L++ G + GF           ++  VSSS IR  +  G 
Sbjct: 117 REVHEGENFRFGHKAEAGMEGLEQLGHELGFTAQTYSP-HILRAAPVSSSRIRNLIAAGA 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---DQ 235
           + +A  L G  F I+S    G   G     PT N+   P++L  +GVY    +       
Sbjct: 176 LHHARALTGRPFAIQSTPASGRGYGTRYTVPTINLAPYPELLPAKGVYVTTLKVGTGPHA 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQR-CTVSFFDYLRPEIKFKDIEK 293
            +++ V N G  PT   +    +ES + +F   ++  Q    ++F   LRPEI++ + E 
Sbjct: 236 ETFNAVTNIGDRPTFGADS-FAVESHLLNFHAVDLNEQTPLELTFLQRLRPEIRWPNPEA 294

Query: 294 LKIYMGEDEKKARKILESSYPLSE 317
           L+  +G D KKA++       L++
Sbjct: 295 LRTQIGLDVKKAQRYFALCTTLTK 318


>gi|262068108|ref|ZP_06027720.1| riboflavin biosynthesis protein RibF [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378196|gb|EFE85714.1| riboflavin biosynthesis protein RibF [Fusobacterium periodonticum
           ATCC 33693]
          Length = 316

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 8/295 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLS 73
             +   VAIGNFDG+H GH  ++ + IK A        V +F  HP   +        ++
Sbjct: 13  EFEDTYVAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFPERKFDYIN 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +LE +G   +I  K       Y+  +F+ K+L + L+VK +  G  F FGK  
Sbjct: 73  TNEEKLYLLESLGVDIVIMQKLDKNFLEYTPLEFV-KILKDKLKVKEIFVGFNFSFGKGG 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    L+   E +      +  +     ++VSSS IR  +       A  LL +   + 
Sbjct: 132 TGTAEDLEYLAEVHNIKVNELPPV-TLDGELVSSSAIRKKIANSDFDGAVKLLDHPMIVI 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--TSYSGVANFGRNPTMV 251
            +VIHG+KI R LGFPT N+++   +    G+Y    +  D+      GV N G NPT+ 
Sbjct: 191 GEVIHGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTLK 250

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               + LE+ I DF +E+YG++  +    ++R E KF  I++LK  +  D  + +
Sbjct: 251 --QEMSLEAHILDFDREVYGEKLYIQIVKFMRKEKKFSSIDELKATIQADVDRWK 303


>gi|296111959|ref|YP_003622341.1| riboflavin biosynthesis protein RibF [Leuconostoc kimchii IMSNU
           11154]
 gi|295833491|gb|ADG41372.1| riboflavin biosynthesis protein RibF [Leuconostoc kimchii IMSNU
           11154]
          Length = 314

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 92/295 (31%), Positives = 157/295 (53%), Gaps = 7/295 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQS-SSPIFTLSPPSI 77
           VVA+G FDG+H GH  ++E+A   A+    P+ VL+++P+P  + ++   P+  L+P + 
Sbjct: 21  VVAMGFFDGVHRGHQAVIERAKSEADKLGVPLAVLTYDPYPAVVFRALEKPLRYLTPLAQ 80

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ +L K+G   +   +FT E A    +QF+  VL+  L    V+ G    +G + +   
Sbjct: 81  KKILLTKLGVDKIYVMQFTSELAKVEPQQFVDDVLM-CLNPILVVGGFDHLYGGNSSTAD 139

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +      +  F  + + E  ++  + + SS IR AL  G +      LG  +     V+
Sbjct: 140 MMHLPFYAQQRFDVIVVPEF-DDNHKKIGSSAIRRALDIGDMNQVNQQLGRIYQTTGLVV 198

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HGE  GR LGFPT N++    + L   G+YA++ +  D   Y G+A+ GRN T     P+
Sbjct: 199 HGEARGRKLGFPTINIKTPELEWLPGIGIYAVKVKVGD-DWYEGMASIGRNITFGDERPV 257

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +E  I DF +EIYG+  TV+++ YLR E+KF  +  L + +  DE + R+  ++
Sbjct: 258 TVEINILDFQREIYGENVTVTWYTYLRGEVKFSTVSDLIVQLNSDEYQTRQYFDT 312


>gi|299772088|ref|YP_003734114.1| riboflavin biosynthesis protein RibF [Acinetobacter sp. DR1]
 gi|298702176|gb|ADI92741.1| riboflavin biosynthesis protein RibF [Acinetobacter sp. DR1]
          Length = 333

 Score =  278 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA  F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASAFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            ++++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQSLVLGDDFHFGKDRQGNSEFL----KDYGFGVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT----- 232
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 233 -----QDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVRQDTPEKPGIAGYHDNSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|187778993|ref|ZP_02995466.1| hypothetical protein CLOSPO_02588 [Clostridium sporogenes ATCC
           15579]
 gi|187772618|gb|EDU36420.1| hypothetical protein CLOSPO_02588 [Clostridium sporogenes ATCC
           15579]
          Length = 303

 Score =  278 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 89/293 (30%), Positives = 150/293 (51%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K    NN    VL+F  HP   I        L    
Sbjct: 12  KTYIALGSFDGLHKGHMKLIKETKKMAKDNNGKSMVLTFKDHPLNTINKDLAPKILLDNP 71

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KILE+ G   +    F  E      E FI+K+L  +      + G  +RFG    GD
Sbjct: 72  SKAKILEEYGVDLVNFINFDKEYMELCPEDFIKKMLY-YYNAGGFVVGFNYRFGYKNLGD 130

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  A  +LG  + ++ D
Sbjct: 131 IELLNKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGD 189

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 190 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTVQ-DK 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 248 KLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKHQLKKDKSFAKR 300


>gi|254467869|ref|ZP_05081275.1| riboflavin biosynthesis protein RibF [beta proteobacterium KB13]
 gi|207086679|gb|EDZ63962.1| riboflavin biosynthesis protein RibF [beta proteobacterium KB13]
          Length = 296

 Score =  278 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 139/312 (44%), Gaps = 19/312 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++ + E  +S        +  IGN+DGIHLGH  ++   I  +   N    V++F PH
Sbjct: 1   MRIYRHFEQARS------PCIATIGNYDGIHLGHQSLINHVISESRAKNLESAVITFEPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+   Q  +    +     + +             +F    +N     FI+ +L   L V
Sbjct: 55  PKEFFQPKAAPKRVISLREKLEFFHSHKLDRAYVIRFDENFSNLEGNDFIE-ILKNKLLV 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  FRFGK R      L    +++G        +  N  + +SSS +R AL    
Sbjct: 114 EGLVVGDDFRFGKKRQFGINEL----KQFGIQVTQPGTIFLNDER-ISSSRVRDALQDAD 168

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
                 LLG  + I   VIHGEK  R LG+PTAN+ +        GV+A++       S+
Sbjct: 169 FHQVESLLGRPYVIAGRVIHGEKKARLLGYPTANVHMFHKSPPLTGVFAVKL-----DSF 223

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GVAN G  PT      L+LE  +FDF + IYG+   V+FF  +R E KF    +L   +
Sbjct: 224 FGVANLGLKPTFGGVKNLVLEVHLFDFDKNIYGKHVHVTFFKKIRDEKKFSTTNELSSQI 283

Query: 299 GEDEKKARKILE 310
             D    ++  +
Sbjct: 284 ASDVNDVKQFFK 295


>gi|307704965|ref|ZP_07641853.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK597]
 gi|307621475|gb|EFO00524.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK597]
          Length = 305

 Score =  278 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +AE+F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAEEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGELLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 DQLKADEEVARNW 304


>gi|237740781|ref|ZP_04571262.1| riboflavin kinase [Fusobacterium sp. 2_1_31]
 gi|229422798|gb|EEO37845.1| riboflavin kinase [Fusobacterium sp. 2_1_31]
          Length = 318

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 8/295 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLS 73
             +   VAIGNFDG+H GH  ++ + IK A        V +F  HP   + S      ++
Sbjct: 13  EFEDTYVAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLEFLFSERKFDYIN 72

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +LE +G   +I  K       Y+  +F++ +L   L+VK +  G  F FGK  
Sbjct: 73  TNEEKLYLLESLGVDVVIMQKLDKNFLEYTPLEFVR-ILKNKLKVKEIFVGFNFSFGKGG 131

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            G    L+   E +      +  +     ++VSSS IR  +       A  LL +   + 
Sbjct: 132 LGTAEDLEYLAEIHNIKVNELPPV-TLDGELVSSSAIRKKIANSDFDGAIKLLDHPMIVI 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--TSYSGVANFGRNPTMV 251
            +VIHG+KI R LGFPT N+++   +    G+Y    +  D+      GV N G NPT+ 
Sbjct: 191 GEVIHGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGVVNIGYNPTLK 250

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
               + LE  I DF +E+YG++  +    ++R E KF  I++LK  +  D  + +
Sbjct: 251 --QEMSLEVHILDFDREVYGEKLYIQIVKFMREEKKFSSIDELKATIQADVDRWK 303


>gi|218960609|ref|YP_001740384.1| Riboflavin biosynthesis protein [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729266|emb|CAO80177.1| Riboflavin biosynthesis protein [Includes: Riboflavin kinase
           (Flavokinase); FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase)] [Candidatus
           Cloacamonas acidaminovorans]
          Length = 311

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 92/298 (30%), Positives = 155/298 (52%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+ IG FDG+HLGH  +L++ ++IA        V+S+  HP  ++++      L P 
Sbjct: 13  KKSVLTIGTFDGLHLGHQKVLKKVVEIAMAEGLQSVVISYQDHPAFVLKTHPMPKMLCPA 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            I+ + ++KMG   +    FTLE A     +F++  ++   + K ++ G    FG  R G
Sbjct: 73  EIKLQEMKKMGIERIELLDFTLELAKTPPLKFLKDYIIPLFQPKVIVMGYDSHFGHLRQG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L +  E+ G+   +++ L   + + +SSS+IR  L  G +  A +LLG  + +   
Sbjct: 133 NYDFLCRHSEELGYRVEYVEPLL-FEGKPISSSSIRNLLLSGKIEAANYLLGRPYRLIGK 191

Query: 196 VIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V H    GR LGFPTAN+ L     ++ K G+Y  +   Q+   + G+ N G +PT+   
Sbjct: 192 VGHSNSKGRKLGFPTANLNLLCPHQLIPKSGIYLSKVIWQENVFF-GLTNIGCSPTVKNT 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           G + +E+ I DF   +YGQ   +    YLR E  FK++++LK  +  D   AR +L+ 
Sbjct: 251 GVIEIETHILDFQDNLYGQIMELDLLSYLREEKMFKNVDELKTAIQNDIALARVMLKE 308


>gi|260553014|ref|ZP_05825929.1| riboflavin kinase [Acinetobacter sp. RUH2624]
 gi|260405256|gb|EEW98753.1| riboflavin kinase [Acinetobacter sp. RUH2624]
          Length = 333

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L ++G   +   KF     + SA +F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASKFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + ++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQALVLGDDFHFGKDRQGNSEFL----KNYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +         
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 230 --FRTQDQTSYSGVA-----------NFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                QD     G+A           + G  P +    P   LE    D S  +YG    
Sbjct: 232 TQKVLQDDPEKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|297202741|ref|ZP_06920138.1| riboflavin biosynthesis protein RibF [Streptomyces sviceus ATCC
           29083]
 gi|297148188|gb|EFH28875.1| riboflavin biosynthesis protein RibF [Streptomyces sviceus ATCC
           29083]
          Length = 275

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 86/280 (30%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+  A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPEDWGRSVVTIGSYDGVHRGHQLIIRHAVDRARELGVPSVVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++ ++G  AL+   FT E +  S  +F+ KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPLLAPHHRRAELMAELGVDALLILPFTTEFSKLSPAEFVVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN---NKSQIVSSSNIRTALT 175
           K V+ G  FRFG   AG+   L ++G+ Y F    +D          +  SS+  R  + 
Sbjct: 118 KAVVEGPNFRFGHKAAGNVDFLVEQGKTYDFEVEVVDLYVTGSAGGGEPFSSTLTRRLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +GVYA    TQ 
Sbjct: 178 EGDVEGAGEILGRPHRVEGVVVRGAQRGRELGFPTANVETLPHTAIPADGVYAGWLHTQG 237

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQR 273
             +     + G NP         +E++  D    ++YG  
Sbjct: 238 -EAMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLH 275


>gi|282854620|ref|ZP_06263955.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J139]
 gi|282582202|gb|EFB87584.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes J139]
          Length = 298

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 12/297 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             V IGNFDG+H GH  ++++A ++  +  + V++F PHP T++        L     + 
Sbjct: 8   STVVIGNFDGVHRGHQALVQEAKRLDPDGYVVVVTFWPHPLTVVAPDQAPALLCSLERRI 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L+  G S +    FT E A+++   F+ +V +  L+ + V+ G  FRFG+   G    
Sbjct: 68  EWLKDAGASEVRVVNFTTEIASWAPAAFVDRV-LGPLQPRHVLVGQNFRFGRHAVGTPDA 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L     ++G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G
Sbjct: 127 L----AEHGCFQVHAMDLVAISGVTVSSTRVREVVAAGKVTEAAELLGRPFEVGGVVVMG 182

Query: 200 EKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYSGVANFGRNPTMVPNG 254
           ++ GR LGFPTAN+ +  D  +  +GVYA                   + G NPT     
Sbjct: 183 DQRGRELGFPTANLVVPQDRAVPADGVYAGWLEPTSGPDAGRRLPSAISVGTNPTFDGV- 241

Query: 255 PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E+++ D    E+YG    V+F + LR +IKF  IE L   M +D + A+++L 
Sbjct: 242 ERRVETYVIDRDDLELYGVDIAVTFAERLRGQIKFDGIEPLISQMADDVETAKRVLS 298


>gi|251773215|gb|EES53767.1| Riboflavin kinase / FAD synthase (RibC) [Leptospirillum
           ferrodiazotrophum]
          Length = 321

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 10/314 (3%)

Query: 1   MHVFHN--IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M  +      + +SLP       + IGNFDG+H GH  +L Q    A +   P  +L+F+
Sbjct: 1   MQTYRGDLATLRRSLPP--GPYAMTIGNFDGVHAGHQYLLSQLFDRARSLSCPSLLLTFD 58

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PHP  ++   S    +     QE++L ++G   L+   F    A  +A+ F+  VL    
Sbjct: 59  PHPLFVLAPDSSFRMIMSRERQEEVLGELGLEILVSLAFDKALAAMAAKDFVSDVLRPLF 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               ++ G +FRFG  R G    L       G   + +      +   +SSS IR A+ +
Sbjct: 119 HPALILVGEEFRFGAGRLGTLDTLSHELSSEGTQVIPLSPFME-EGHRISSSRIRKAVDQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQ 235
           G +  A  LL     I   V+ GE+ GR LGFPT N+      L    GVYA R R +  
Sbjct: 178 GEIEQANRLLTRPLEISGPVVRGEQRGRLLGFPTLNLIPPDHRLVPPPGVYATRTRVEG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +      G  PT   + P ++E+ +  FS ++YG    V F+  +R E  F +++ LK
Sbjct: 237 VLHDSATYIGTKPTFGTHRP-VIETHLPGFSGDLYGVDHEVFFYHRVRGERSFPNVDALK 295

Query: 296 IYMGEDEKKARKIL 309
             +  D   + + L
Sbjct: 296 AQIASDIDSSLRYL 309


>gi|270307964|ref|YP_003330022.1| FAD synthase [Dehalococcoides sp. VS]
 gi|270153856|gb|ACZ61694.1| FAD synthase [Dehalococcoides sp. VS]
          Length = 305

 Score =  278 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 8/296 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  +V IG FDG+HLGH  ++ +  K     N    +++F  HP  ++     I  +   
Sbjct: 15  QDTLVTIGIFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLGQDD-IKLILSL 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   L +MG   +I   FT E +  SA  F+  + ++ L +K ++ G+ F  GK+RAG
Sbjct: 74  EERNLALSQMGLDQIIMLSFTPEISTVSATDFVGYL-LDHLHMKGIVVGSDFALGKNRAG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++      F    +  +   ++QIVSS+ IR AL  G+V  A  +LG  + +   
Sbjct: 133 DATALRRLSHIMDFSVSVVSPVVI-ENQIVSSTAIRRALLSGNVSKARLMLGRNYHLRGT 191

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V +G   G  LGFPTAN+ L   + L  +GVYA +     +  Y+ VAN G  PT     
Sbjct: 192 VQNGANRGTKLGFPTANLTLPGYLALPADGVYAAKA-FLGEKEYNAVANIGSCPTF-GQE 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              LE  + DF+ +I GQ   V F ++LRPEI F D E LK  +  D  KAR IL 
Sbjct: 250 EHRLEVHLLDFAGDIRGQVLKVEFVEFLRPEICFADAEALKTQISADISKARDILR 305


>gi|260060924|ref|YP_003194004.1| riboflavin biosynthesis protein RibF [Robiginitalea biformata
           HTCC2501]
 gi|88785056|gb|EAR16225.1| riboflavin biosynthesis protein RibF [Robiginitalea biformata
           HTCC2501]
          Length = 264

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 138/264 (52%), Gaps = 5/264 (1%)

Query: 50  ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            T+L+F PHPR ++Q  S +  L+    +  IL + G   L+ + FT   +  +A QF++
Sbjct: 3   STLLTFYPHPRMVLQKDSGLKLLNTIEEKTDILRETGLDCLVIHPFTQRFSRLTATQFVR 62

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           ++LVE L  K +I G   RFG++R  +   L+  G  + F    I   +      VSS+ 
Sbjct: 63  EMLVEKLHTKKIIIGYDHRFGRNRTANIQDLEAFGNLFDFSVEEISA-QEVDEVSVSSTK 121

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD--ILLKEGVYA 227
           IR AL  G +  A   LGY + +   V  G+ +GR LGFPTAN+ +  +  ++   GVYA
Sbjct: 122 IRKALEAGDLETANAYLGYPYMLSGTVRRGKGLGRNLGFPTANLGIDSEYKLIPANGVYA 181

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           +R +  D+  + G+ N G NPT+  +G   +E   FD  Q++Y Q   V     LR E K
Sbjct: 182 VRSQLGDREVF-GMMNIGSNPTVEDSGQH-IEVHFFDLDQDLYDQPLRVGLLARLRDERK 239

Query: 288 FKDIEKLKIYMGEDEKKARKILES 311
           F  +E LK  +  D++ AR+ +  
Sbjct: 240 FDSLEALKEQLSLDQQAARRAIRQ 263


>gi|293611282|ref|ZP_06693580.1| hypothetical protein HMPREF0013_03445 [Acinetobacter sp. SH024]
 gi|292826533|gb|EFF84900.1| hypothetical protein HMPREF0013_03445 [Acinetobacter sp. SH024]
          Length = 333

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q  KIA        V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       ++    + + L  +G   +   KF     + SA  F   +L + L 
Sbjct: 58  QPLEFFKGYDAPPRINSLREKVEYLAALGVDYIAVAKFDEHFRSMSASAFAD-LLKDKLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            ++++ G  F FGKDR G+   L    + YGF    +  +   + + VSS+ IR  L  G
Sbjct: 117 AQSLVLGDDFHFGKDRQGNSEFL----KDYGFQVTNLHTI-ELEGERVSSTRIRQVLQVG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---- 233
           ++  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+Y +    +    
Sbjct: 172 NLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSL 231

Query: 234 -----------------DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                             + S  G  + G  P +    P   LE    D S  +YG    
Sbjct: 232 TEKVRQETPEKLGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  +  D ++ R+ 
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDNDVQQLRQY 324


>gi|126696796|ref|YP_001091682.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9301]
 gi|126543839|gb|ABO18081.1| putative riboflavin kinase/FAD synthase [Prochlorococcus marinus
           str. MIT 9301]
          Length = 307

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 14  PNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           P+ +K    +AIG+FDG+H GH  +++  ++    +P    SF PHPR ++   + +  L
Sbjct: 7   PSEVKSPTSIAIGSFDGLHAGHRKLIKSVVEDNLYTPTIA-SFWPHPREVLYKETRL-RL 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             P  +  ILE +G   L+   F  E +  SAE+F++ +L+  L+ K +  G  F+FG  
Sbjct: 65  DLPEEKLPILEDLGIEQLVLIPFDKELSKLSAERFVRDILINQLQAKNISVGANFKFGFK 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R GD   ++   +           L + + + +SSS IR  L K  + NA  +L   ++ 
Sbjct: 125 RRGDINTIKNMIKDTDIKLKITPILEDKEGR-ISSSRIRDLLEKSDLKNAFKILNRPYSF 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTM 250
              V+ G+ IG+++G+PTAN+++     L  EGVYA     ++       + N G  PT+
Sbjct: 184 NGKVVKGKGIGKSIGWPTANLEIDGRKFLPGEGVYAAWTTIENSNKKIESIMNLGSQPTI 243

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            P  P  +E  + +   ++YG   +V   + LR +IKF +I++L   +  D++ A  I +
Sbjct: 244 NPLLPSAVEVHLINKDIDLYGLNLSVVPVEKLRSQIKFNNIKQLASQIKNDKENALGIFK 303

Query: 311 SS 312
           + 
Sbjct: 304 NC 305


>gi|154497689|ref|ZP_02036067.1| hypothetical protein BACCAP_01665 [Bacteroides capillosus ATCC
           29799]
 gi|150273187|gb|EDN00332.1| hypothetical protein BACCAP_01665 [Bacteroides capillosus ATCC
           29799]
          Length = 301

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V+A+G FDG+H GH  +L +  ++A         ++F+ HP  +I   SP+  +S P
Sbjct: 4   KKRVIALGFFDGVHRGHGALLSRVAQVAQEMGATPAAVTFDTHPENLIIG-SPMPLISSP 62

Query: 76  SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + +++ +  G   +I   F     +     F+   L+       ++ G  F FG    
Sbjct: 63  LDRAELMRRYYGIQEVIIAHFDDRMMHMPWRDFVTDFLIRENGAVHLVAGHDFHFGYKGE 122

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G+   L+    + G     I ++       +SS+ IRT L +G +  A + LG+  T+  
Sbjct: 123 GNPERLKTVCAEMGIGCDIIPKV-ELDGITISSTYIRTLLAQGEMERANYFLGHPHTLTD 181

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V HG+K+G TLGFPT N+  +P +L    GVYA R   ++  S   V N G  PT+  +
Sbjct: 182 TVAHGKKLGTTLGFPTVNLHFAPGVLIPARGVYATRVCFENGDSRPAVTNIGVRPTVDDH 241

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           G + +E FI DF  ++YGQ   + F+ +LR E KF  +E L+  +  + ++ R+   +
Sbjct: 242 GSVNVEGFILDFDGDLYGQTIRMEFYRHLRGEQKFPSLEALRDEVMRNAEQTREYFAT 299


>gi|307709228|ref|ZP_07645687.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK564]
 gi|307620174|gb|EFN99291.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK564]
          Length = 305

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +AE+F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAEEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG     D    +   + +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGS----DTKTAEDLKDYFDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAEELLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 DQLKADEEVARNW 304


>gi|229824133|ref|ZP_04450202.1| hypothetical protein GCWU000282_01437 [Catonella morbi ATCC 51271]
 gi|229786487|gb|EEP22601.1| hypothetical protein GCWU000282_01437 [Catonella morbi ATCC 51271]
          Length = 315

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 84/316 (26%), Positives = 152/316 (48%), Gaps = 11/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +      N  +P      V+ +G FDG+H GH  +++   + A+    P+ V++FN H
Sbjct: 1   MEIIRIHHPN--IPQLKGPIVLVLGFFDGVHRGHQAVIQAGRRQADRLGLPLAVMTFNQH 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ +     ++ +  LS    +  +LE      +    FT    + S + F++  +V  L
Sbjct: 59  PKIVYSRLTAAEMDYLSDLDRKMDLLEANQVDMVFLVDFTYPFGSQSPQAFVENYIV-GL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  + +G     +   L +      F  + + EL  N+ + + S+ IR  L +
Sbjct: 118 KAQVVVAGFDYTYGPKEEANMSTLPQHAAGR-FQIIEVPELVLNQ-EKIGSTPIRELLLE 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQ 235
           G +  A   LGY +     V+HGEK GRT+GFPTAN++  +  +    G+Y +  +    
Sbjct: 176 GKIDEANLALGYVYETSGVVVHGEKRGRTIGFPTANIRPQAGQVQPGPGIYVVEIQVNG- 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G+A+ G N T   +  L  E  IF+F+Q IYG+   V +  YLR E+KF+ ++ L 
Sbjct: 235 IWHQGMASIGYNVTFETDTGLTCEVHIFNFNQLIYGETVKVRWHHYLRGEVKFESVQGLI 294

Query: 296 IYMGEDEKKARKILES 311
             +  D+  ++   + 
Sbjct: 295 QQLQADQAASQAYFQE 310


>gi|322376733|ref|ZP_08051226.1| riboflavin biosynthesis protein RibF [Streptococcus sp. M334]
 gi|321282540|gb|EFX59547.1| riboflavin biosynthesis protein RibF [Streptococcus sp. M334]
          Length = 305

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +AE+F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAEEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDQK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGELLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 DQLKADEEVARNW 304


>gi|325282580|ref|YP_004255121.1| riboflavin biosynthesis protein RibF [Deinococcus proteolyticus
           MRP]
 gi|324314389|gb|ADY25504.1| riboflavin biosynthesis protein RibF [Deinococcus proteolyticus
           MRP]
          Length = 296

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 13/281 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            VVAIG+FDG+HLGH  +L Q    A     P  V +F+P P  ++     +  LS    
Sbjct: 15  TVVAIGSFDGVHLGHQALLAQLKAKAREYRVPSVVYTFDP-PTKVLTKG--VEYLSTLPE 71

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +L   G    +   FT E A      F+  + +  L  + V+ G  F FGK RAG  
Sbjct: 72  KLDLLTVYGIDETVAVPFTPEFAARDKSAFLDDLRL--LRPRAVVVGEDFYFGKARAGGV 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+          V +  +     + + S+ +R  L +G V  AA LLG  +  +  V+
Sbjct: 130 DDLRDVTRD-----VMVVPIHGVSGEDIKSTRVREYLREGDVTGAARLLGRPYAAQGVVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+++GRT+G+PTAN+++     L  GV+A+R       S+ G+AN G  PT+       
Sbjct: 185 QGDQLGRTIGYPTANIRVPEGKALPRGVFAVRVADDRGGSWGGMANIGVRPTV-GGEERR 243

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            E  +FDF+ ++YGQ   V F   LR E +F  +++L+  +
Sbjct: 244 FEVNLFDFAGDLYGQELQVQFVARLRGEQRFSGLDELQAQL 284


>gi|304390812|ref|ZP_07372764.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304325695|gb|EFL92941.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 331

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 21/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F         P++    +V IG FDG+H GH  I+E+ +     +     VL+F+P 
Sbjct: 1   MQIFR------DKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +         +     +   +E++G  A    ++ L+ A  S  +F+   LV  L  
Sbjct: 55  PRQVHHPDPKNKLICSLPDRLTRIEQLGVDATWVQQYDLDFAAQSPAEFVHNYLVAPLRP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
           + V+ G   RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G
Sbjct: 115 EVVVIGEDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ--- 233
            V  AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 RVDQAAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPP 234

Query: 234 ------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEI 286
                          + G +P     G   +E+ +      ++YG+   + F   +R  +
Sbjct: 235 HSKTPSSLEVVPAAISVGTSPHFGDVG-RTVEAHVLGRADLDLYGEEVVIEFVHRIRDNL 293

Query: 287 KFKDIEKLKIYMGED 301
            F  ++ L   M  D
Sbjct: 294 AFDSLDALLERMDRD 308


>gi|226952304|ref|ZP_03822768.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|294648749|ref|ZP_06726208.1| FAD synthetase [Acinetobacter haemolyticus ATCC 19194]
 gi|226836970|gb|EEH69353.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|292825363|gb|EFF84107.1| FAD synthetase [Acinetobacter haemolyticus ATCC 19194]
          Length = 333

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNP 57
           M +   + +N   PN  L    V IGNFDG+HLGH  ++ Q      A      V+ F P
Sbjct: 1   MKL---LRLNALSPNFQLPPTAVTIGNFDGVHLGHQAMIAQLKSLASAQGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       +S    + + L ++G   +   KF     + +A +F   +    L 
Sbjct: 58  QPLEFFKGYDAPPRISSLREKVEYLTELGVDYIAVAKFDQYFRSLNATEFADLLKF-KLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +T++ G  F FGKDR G+   L+     YGF+   +D +  N  + VSS+ IR  L +G
Sbjct: 117 AQTLVLGDDFHFGKDRQGNSEFLR----DYGFNVTNLDTIALNDER-VSSTRIRQVLQEG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--- 234
            +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+YA+    ++   
Sbjct: 172 DLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLSGIYAVDVVCENASL 231

Query: 235 ------------------QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                               S  G  + G  P +    P   LE    D S  +YG    
Sbjct: 232 TAKVKHTNPALNGIAGYQSDSLFGAGHVGTRPAIEQVQPEWRLEVHFPDVSANLYGLLMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  + +D +K R  
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDDDVQKLRDY 324


>gi|258645569|ref|ZP_05733038.1| riboflavin biosynthesis protein RibF [Dialister invisus DSM 15470]
 gi|260402927|gb|EEW96474.1| riboflavin biosynthesis protein RibF [Dialister invisus DSM 15470]
          Length = 307

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 163/314 (51%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M++   ++    LP   +  V+A G FDG+H GH  +L+  +++A         ++F PH
Sbjct: 1   MNIIKTLD---QLPEK-RPVVLAFGFFDGVHRGHQAVLQACLQLAREKKAMPVAVTFYPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P T++  S+ I  L   S +E++ ++MGF   +    T E    SA +F+Q +      +
Sbjct: 57  PLTVLLPSASIQLLLSESEKEELFKQMGFETTVVISPTEEFLGQSAGRFLQSLS-RITSL 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++TG  F FGK+  G+  +L       G   + I +L   +  ++SS+ IR  + +G 
Sbjct: 116 CGIVTGENFTFGKNAEGNAELLNSYFLDKGVF-IQIVKLEKAEGGVISSTRIRKCILQGD 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI-LLKEGVYAIRFRTQDQT 236
           V  A + LG  + I  D+IHG + G   LGFPTAN++   +  +  +GVYA R   +   
Sbjct: 175 VKKAGYFLGRPYRICGDIIHGFRRGTEVLGFPTANLKPERERAVPGDGVYATRAFIRG-R 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  V N G NPT   N    +E+FIF F ++IY     + + + +R E +F DIE L  
Sbjct: 234 QYPSVTNVGTNPTF-GNKERSIETFIFSFDEKIYDAPFALEWIEKIREEKQFPDIEALCR 292

Query: 297 YMGEDEKKARKILE 310
            + ED K+A++ILE
Sbjct: 293 QIEEDIKRAKQILE 306


>gi|253580816|ref|ZP_04858079.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847886|gb|EES75853.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 299

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/306 (30%), Positives = 156/306 (50%), Gaps = 13/306 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + I    P  +    V +G FDGIH GH  ++E+ I+        V         ++   
Sbjct: 5   LRIENDFP-RISHSAVTLGKFDGIHRGHQKLVEKIIEQKQEGAQAV---------VLALG 54

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +   T+     + +ILE+MG   L+    T +  +  AE FI+++L+  L+V  V  G  
Sbjct: 55  TASRTILTKEERCRILEEMGVDILLECPLTEKIRHMKAENFIKEILIGDLQVSYVAVGED 114

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG +R G   +L++ G+KYGFHT  + + + +  + +SS+ +R  L +G++     L+
Sbjct: 115 FRFGYERKGTPAMLKEFGKKYGFHTEVLPK-KMDGRRKISSTFVREELNRGNMEKFRFLM 173

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           G  F++E  V HG  +G     PT N+      ++   GVY      +D  SY G+ N G
Sbjct: 174 GTDFSVEGIVEHGRGMGHKYLLPTTNLIPPVEKLMPPNGVYITVSHFRD-RSYQGITNVG 232

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     + +E+++FD ++++YG+ C V F  +LRPE KF  +E LK  +  D  K 
Sbjct: 233 HKPTVGGEKFIGVETYLFDCNEDLYGEYCKVDFKKFLRPEQKFSSLEALKAQLERDAVKG 292

Query: 306 RKILES 311
           ++  E+
Sbjct: 293 QEYFET 298


>gi|148652439|ref|YP_001279532.1| riboflavin biosynthesis protein RibF [Psychrobacter sp. PRwf-1]
 gi|148571523|gb|ABQ93582.1| FMN adenylyltransferase / riboflavin kinase [Psychrobacter sp.
           PRwf-1]
          Length = 355

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 144/344 (41%), Gaps = 51/344 (14%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRT 61
            H  + + +L +     V+ IGNFDG+HLGH  +L+Q             V+ F P PR 
Sbjct: 11  IHGTKSDLALASA---SVLTIGNFDGVHLGHQAMLKQLQDTAKQQQLSSMVMIFEPQPRE 67

Query: 62  IIQ-----SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                     S    L+    +  +L+  G   ++  KF     + SA +F   +  ++L
Sbjct: 68  YFAQLKGDPESAPARLTSQDEKLTLLKDFGIDTVVVAKFDEAFRSLSATEFADMLT-QYL 126

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-----------SQIV 165
            V+ ++ G  FRFG DR GD   L+     YG     +  + + +              +
Sbjct: 127 NVQALVLGDDFRFGHDRTGDSAFLRS----YGLPVTNLHTITDTQAIASGVADDLSDNRI 182

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGV 225
           SS+ IR  L  G +  A HLL   ++I  +V+ G+KIGRTL FPTAN++L+       GV
Sbjct: 183 SSTRIRELLLAGDLRMANHLLNRDYSITGEVVGGDKIGRTLDFPTANIELNRVRPALHGV 242

Query: 226 YAIRFRTQD-------------------------QTSYSGVANFGRNPTMVPNGPLLLES 260
           Y +     D                           S  G AN G  PT+       LE 
Sbjct: 243 YGVDVVVLDEQGAVIKNAFAHLAQPEQLGISGLRPHSLFGTANIGIRPTVDKPHEWRLEV 302

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           F   FS ++YG+   V F  +L  E K+  +E LK  + +D   
Sbjct: 303 FFPKFSGDLYGKTLQVRFLHHLHDERKYDGLEALKAGIQQDVAD 346


>gi|256544702|ref|ZP_05472074.1| riboflavin biosynthesis protein RibF [Anaerococcus vaginalis ATCC
           51170]
 gi|256399591|gb|EEU13196.1| riboflavin biosynthesis protein RibF [Anaerococcus vaginalis ATCC
           51170]
          Length = 313

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 173/314 (55%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           + +F +++ N+     L    V++GNFDG+H GH  ++++ IKI+ +  +T  VL F  +
Sbjct: 5   IKIF-DLDFNEF---DLSPKAVSLGNFDGVHKGHQKLMKENIKISKSKNLTPSVLLFKEN 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            + I+        L+    + +IL+ +G       +F+ +  + S  +FI+++L + L  
Sbjct: 61  TKNILNGER--EYLTSLEDKIEILKNLGIECFCLLEFSDKFKDLSPYEFIEEILYKKLNT 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K VI G  +RFGK   GD   L+K  E + + T  +D    +  +I++S++IR  + +G 
Sbjct: 119 KYVIVGDNYRFGKMAKGDIKTLKKYEEDFAYKTKVVD-FELDDGKIINSTDIRQMVREGK 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +  A   LG+ F ++  VI G + GR L FPTAN++ S   +  K GVY  R    D+  
Sbjct: 178 IEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFKYVTAKSGVYFTRVNI-DRDF 236

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + + G NPT   N  + +E++I DFS++IYG+  ++ F +YLRP+ KF   E+L   
Sbjct: 237 YYALTDIGTNPTF-ENKKMKIETYIMDFSKDIYGKNISIEFLEYLRPDYKFNSPEELIGQ 295

Query: 298 MGEDEKKARKILES 311
           M +D+K  R ++E 
Sbjct: 296 MEKDKKTGRNLIEK 309


>gi|148994559|ref|ZP_01823718.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP9-BS68]
 gi|168483188|ref|ZP_02708140.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1873-00]
 gi|168488955|ref|ZP_02713154.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP195]
 gi|147927153|gb|EDK78190.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP9-BS68]
 gi|172043328|gb|EDT51374.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1873-00]
 gi|183572583|gb|EDT93111.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP195]
          Length = 305

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 EQLKADEEVTRNW 304


>gi|262282381|ref|ZP_06060149.1| riboflavin biosynthesis protein RibF [Streptococcus sp. 2_1_36FAA]
 gi|262261672|gb|EEY80370.1| riboflavin biosynthesis protein RibF [Streptococcus sp. 2_1_36FAA]
          Length = 305

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M   H    N+      +  V+ +G FDG+H GH  +  +A +I       I VL+F   
Sbjct: 1   MKTIHI--SNEKDIQQTQDTVLVLGYFDGLHRGHQALFAEARQIAAEKKLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +E++LE  G   L    FT   A   A+ F +K  V+ L
Sbjct: 59  PKLAFVRYQPDLLLHLNSPEEREQLLEAQGVDYLYLIDFTSCFAGNKAKDFFEK-FVKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  + FG D+   + + Q    +     + I    N   + +SS+ IR A+ +
Sbjct: 118 KARAVVAGFDYHFGSDKKEAKELSQFFDGQ-----IVIVSSVNEDDEKISSTRIRQAIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V +A  LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY +       
Sbjct: 173 GRVADATKLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVFLPGDGVYVVEVEHNG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E+ IFDFS++IYG    + + D +R  +KF  IE L 
Sbjct: 232 ERYKGMASVGKNVTFEGD-ELRFEANIFDFSKDIYGDTIKIYWLDKIRDMVKFDGIESLL 290

Query: 296 IYMGEDEKKARKI 308
             +  DE  AR  
Sbjct: 291 NQLKSDEAIARAW 303


>gi|313897512|ref|ZP_07831055.1| riboflavin biosynthesis protein RibF [Clostridium sp. HGF2]
 gi|312957882|gb|EFR39507.1| riboflavin biosynthesis protein RibF [Clostridium sp. HGF2]
          Length = 314

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 13/315 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M V H N+     +   L      IG FDG+HLGH  ++E+   +    N+   +++F+P
Sbjct: 1   MKVVHINLTGTAVIEEPLTAC---IGYFDGLHLGHQKLIEEVKRVAARRNTRCALITFDP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P  +I+    I  ++P   + +I E MG    I   F+ E A+ + + F +KV ++ L 
Sbjct: 58  DPWCVIRGLQDIAHITPMKQRMRIAEAMGIEYWIILDFSREMADLTPQDFHEKV-LKPLR 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + T++ G  F +G+   GD    Q   E+  F    ID++ +++ + +SSS I   + +G
Sbjct: 117 LDTLVCGYDFHYGRKGEGDA---QSLHEQTDFDVHVIDQV-SSEHRKISSSRIEELIQEG 172

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            +  AA  +G  + +E  V  G  +GR  GFPTAN++L    ++ K+GVY    +    T
Sbjct: 173 DMEKAARFMGRWYDMEGSVKGGSHVGRKNGFPTANLRLQELYVMPKKGVYVGAVKVLG-T 231

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + N G NPT        +E+ + DF Q+IY +     F  Y+R E KF D   L  
Sbjct: 232 WHRAMMNVGNNPTYNYQEAGSIEAHLLDFDQDIYEEPVIFRFLSYIREERKFPDARALGE 291

Query: 297 YMGEDEKKARKILES 311
            + +D    R   E 
Sbjct: 292 QLKKDLATTRSYFEK 306


>gi|312869003|ref|ZP_07729180.1| riboflavin biosynthesis protein RibF [Lactobacillus oris
           PB013-T2-3]
 gi|311095429|gb|EFQ53696.1| riboflavin biosynthesis protein RibF [Lactobacillus oris
           PB013-T2-3]
          Length = 323

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 13/320 (4%)

Query: 1   MHVF--HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFN 56
           M V   H+   +Q +P+     V+A+G FDG+H GH  ++  A KI    N P+ VL+++
Sbjct: 1   MRVIKIHHPLNHQLVPD--GPVVLAMGFFDGVHRGHQEVIGTAKKIAQERNLPLAVLTYD 58

Query: 57  PHPRTIIQSSSPIF-TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             P  +       F  LS    + ++LE++G   +    FT   A+ S E F+    ++ 
Sbjct: 59  HAPGIVYHQYPDGFDYLSTTKRKLELLEELGVDLVYLVSFTSAYASLSPEDFVTDY-LQA 117

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTA 173
              + V+ G    +G         L        F  V + +   +      V S  IR  
Sbjct: 118 FHSQVVVAGFDHTYGTKDVATMERLPMYAAGR-FEVVTVPKFTLSGQSGAKVGSRQIRQL 176

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRT 232
           +  G V  A   LGYR+     V+HG   GRTLGFPTAN++    +++   GVYA+  + 
Sbjct: 177 IATGQVGAANTALGYRYQTSGLVVHGLARGRTLGFPTANIEAPQEELIPGIGVYAVEVKV 236

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
            D   Y G+A+ G N T      L +E ++FDF Q IYG+   V ++ YLR E KF   +
Sbjct: 237 GD-RWYGGMASVGHNITFGKAAKLTVEIYLFDFKQMIYGEEVRVRWYQYLRGEEKFAGAD 295

Query: 293 KLKIYMGEDEKKARKILESS 312
           +L   M  DE  AR++L  +
Sbjct: 296 ELVAQMHHDETNARRVLADA 315


>gi|258648269|ref|ZP_05735738.1| riboflavin biosynthesis protein RibF [Prevotella tannerae ATCC
           51259]
 gi|260852185|gb|EEX72054.1| riboflavin biosynthesis protein RibF [Prevotella tannerae ATCC
           51259]
          Length = 320

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSF 55
           M V  + +  Q +   L      V  +G FDG+HLGH  +L+Q    A         ++F
Sbjct: 1   MLVIKDFDQTQPIRQPLHSATPIVATVGFFDGVHLGHRYLLKQVRDEARRRGGWAMAITF 60

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           + HPR ++  S     L+    +   + + G        FT   A   A+ F+Q  L + 
Sbjct: 61  SVHPRRVLDVSYRPQMLTTTEEKLGFIAESGMDCCTILDFTPALAKLPAKDFMQYFLRDK 120

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L V  ++ G    FG DR       +  G   G   +  +  +N+    +SSS IR  L 
Sbjct: 121 LGVSVLLMGYDHHFGSDRLVGLAPYKALGASLGIEVLKAEAYKNDD-LTLSSSLIRRCLE 179

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQ 233
            G++      LG R+ ++  V+ G  IGR LGFPTAN++       L   GVYA+    +
Sbjct: 180 AGNIACVNSSLGRRYDLKGHVVEGHHIGRDLGFPTANLEPDDPQKCLPGRGVYAVFAEIR 239

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            +T Y  + N G  PT+     + +E+ +F F    YG+  T+SF   LR E +F  +E 
Sbjct: 240 GKT-YPAMLNIGFRPTLNDGNKVTIETHLFGFEGNAYGEALTLSFVHRLRDEQRFDSLET 298

Query: 294 LKIYMGEDEKKARKIL 309
           L+  + +D      IL
Sbjct: 299 LRHQLQQDADNTLHIL 314


>gi|227499292|ref|ZP_03929404.1| possible FAD synthetase [Anaerococcus tetradius ATCC 35098]
 gi|227218643|gb|EEI83877.1| possible FAD synthetase [Anaerococcus tetradius ATCC 35098]
          Length = 312

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/307 (31%), Positives = 167/307 (54%), Gaps = 8/307 (2%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS 65
           ++N  LP  L+   V++GNFDG+HLGH  +++  ++I+    +   VL F  + +  ++ 
Sbjct: 9   DLNIDLP-DLQRKAVSLGNFDGVHLGHQKLMKNNLEISKKYDLEPAVLLFKQNTKLRLKD 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 ++    + +IL  +G        F  +  N S  +FI +++ + L    +I G 
Sbjct: 68  EK--EYMTSLEDKIEILSSIGIHTFCLIDFDEKFMNLSPREFIAEIINKKLNASYIICGK 125

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +RFGK  +GD   L+K  E+Y + T  +D  + ++   +SS+++R  + +G++     L
Sbjct: 126 DYRFGKKASGDVDTLEKYEERYNYKTSVVDFEKEDEFNKISSNHLRDLIREGNIKKVNKL 185

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANF 244
           L   + I+  ++ G K GRTL FPTAN++LS   +L  +GVY  R    D  SY  ++N 
Sbjct: 186 LARPYKIKGTIVDGMKRGRTLNFPTANLKLSFNYVLPIDGVYLTRINI-DNKSYYALSNV 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G+NPT   N    +E++I DF Q IYG+  ++ F ++ R +IKF   E+L   M  D+K+
Sbjct: 245 GKNPTFGENS-RKVETYILDFDQNIYGENVSIEFLEFFRYDIKFTSREELIEQMNIDKKR 303

Query: 305 ARKILES 311
           A K LE+
Sbjct: 304 AYKYLEN 310


>gi|307700014|ref|ZP_07637063.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris FB024-16]
 gi|307614775|gb|EFN93995.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris FB024-16]
          Length = 331

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 21/323 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +FH        P+     VV IG FDG+H+GH  I+ Q +++A         L+F+P 
Sbjct: 1   MQIFH------ESPSKFGPSVVTIGTFDGVHMGHQQIIRQVVELARENHLNSLALTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR + Q S     +     +   L  +G  A     + L+ A  + + F+ K LVE L+ 
Sbjct: 55  PRQVHQPSPGNKLICTLGDRLLFLAALGLDATWVQHYDLDFAALTPKDFVVKCLVEPLQP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKG 177
           + ++ G   RFG   +G+   L + G KYGF    + ++ +   S+  SSS +R  L  G
Sbjct: 115 RIIVVGKDTRFGAQNSGNIVTLTELGAKYGFAVQVVPDIIDPITSKRWSSSWVRRLLEAG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ--- 233
           +V  A ++LG    +   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 NVDQAGYVLGRPHQVRGLVVHGKQRGRQLGFPTANLDAEYVEAIPADGVYAGWVRRAYPH 234

Query: 234 ------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEI 286
                    +     + G +P     G   +E+ +       +YG+   V F   +R   
Sbjct: 235 GSNHPTSLEALPAAISVGTSPHFGDVG-RTVEAHVLGRSDLNLYGEEIVVQFVHRIRENR 293

Query: 287 KFKDIEKLKIYMGEDEKKARKIL 309
            F+ ++ L   M +D  +   +L
Sbjct: 294 AFESLDALLSRMDQDLLETATVL 316


>gi|319947275|ref|ZP_08021508.1| riboflavin biosynthesis protein RibF [Streptococcus australis ATCC
           700641]
 gi|319746517|gb|EFV98777.1| riboflavin biosynthesis protein RibF [Streptococcus australis ATCC
           700641]
          Length = 305

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/294 (30%), Positives = 147/294 (50%), Gaps = 13/294 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSP--IFTLSPP 75
            V+ +G FDG+H GH  +   A  IA+   +   VL+F   P+       P  +  L  P
Sbjct: 18  AVLVLGYFDGLHRGHQELFRTARAIADEQGLRVAVLTFPESPKLAFARYQPELLLHLQNP 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + K +E++G   L    FT + A ++AE+F+    +  L  + ++ G  + FG D+  
Sbjct: 78  EERFKRMEELGVDDLYLIDFTSDFAAHTAEEFVATY-LTRLRARVLVAGFDYSFGSDKK- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L    +      + +  + + + + +SS+ IR A+  G V  AA+LLGY  +    
Sbjct: 136 VASDLGTYFKGQ---VIVVPPVLD-QGEKISSTRIRQAIASGQVKEAANLLGYPLSSRGI 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+GFPTAN+  +    L ++GVY +         + G+A+ G+N T     
Sbjct: 192 VVHGDARGRTIGFPTANLAPIDRTHLPQDGVYVVEVEVLG-KRHRGMASVGKNSTF-DGT 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            L  E+ IFDFS++IYG    + + D +R  +KF  +E L   + +DE  ARK 
Sbjct: 250 ELRFEANIFDFSKDIYGHTIRIFWLDKIREMVKFDSVEALVEQLRQDEILARKW 303


>gi|241896000|ref|ZP_04783296.1| FAD synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870731|gb|EER74482.1| FAD synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 311

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 160/313 (51%), Gaps = 9/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M V +            +  V+A+G FDG+H GH +++++A + A      + VL+++ H
Sbjct: 1   MEVIYLHHPYAVNQIKKEPVVLAMGFFDGVHAGHRMVIKRAAEEAKKRGIKLAVLTYDHH 60

Query: 59  PRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  + ++ + P+  L+    +  +L ++G        FT E A  + + F+ + +   L 
Sbjct: 61  PSIVFKTYNKPLTYLTRLPKKLALLAELGVDLTYVVNFTSEFAQLTPQIFVDQYMF-GLH 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + V+ G    +G   A D   L +  +   F  + + ++  +  +  S++  R  + +G
Sbjct: 120 AEAVVAGFDHTYGPKNA-DMKHLPQYAQSR-FDVIEVQQVNVDGKESASTTA-RKMVDEG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            +    HLL   +     ++HGE  GR LG+PTAN++ +P + L   GVY +  +  DQT
Sbjct: 177 RLDTLTHLLMRPYETTGLIVHGEARGRELGYPTANIETTPGERLPGVGVYVVEMKI-DQT 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y G+A+ G N T   N P  +E  +F+FS+ IYG+   + +  YLR E+KF ++++L  
Sbjct: 236 WYPGMASIGYNVTFGENRPKTVEINLFNFSRAIYGENVQIKWHHYLRGEVKFNNVQELID 295

Query: 297 YMGEDEKKARKIL 309
            + EDEK+A+  L
Sbjct: 296 QLAEDEKEAQAFL 308


>gi|297626621|ref|YP_003688384.1| riboflavin biosynthesis protein (riboflavin kinase) FAD synthetase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922386|emb|CBL56958.1| Riboflavin biosynthesis protein (Riboflavin kinase) FAD synthetase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 325

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 16/307 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIA-------NNSPITVLSFNPHPRTIIQSSSPIFTL 72
            VV IGNFDG+H GH  +L+ A + A        +  +  ++  PHP T+  +      L
Sbjct: 4   SVVVIGNFDGVHQGHQRLLQVARERAHTLAEGGRDLKVIAVTLWPHPMTVFAADRAPRLL 63

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    + ++L   G   +   +F  E A++S E+F+  + V  L    VI G  F FGK 
Sbjct: 64  TTLDDRLRLLRHYGADEVRVIQFNREVASWSPERFVDTM-VRPLNPAVVIVGANFTFGKG 122

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
             G    L++      F    +  L +   +  SSS IR  L  G V  AAH LG  F +
Sbjct: 123 ARGTGETLRELSGG-DFEVQNLG-LVSVGGRKTSSSFIRRTLAAGDVATAAHHLGRTFRV 180

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQ---TSYSGVANFGRNP 248
              V+ G++ G TLGFPTAN+ +S ++    +GVYA      D+          + G NP
Sbjct: 181 TGVVMVGDQRGHTLGFPTANLAISAELATPGDGVYAGWLTPLDEPDAEPLEAAISVGTNP 240

Query: 249 TMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T        +ES++ D     +YG+   V F ++LR   +F DI++L   M  D K+ R+
Sbjct: 241 TFDGV-ERRVESYVVDRTDLHLYGRHIAVDFVEHLRGMARFHDIDELITQMHSDVKRTRE 299

Query: 308 ILESSYP 314
           +L+++ P
Sbjct: 300 VLDATRP 306


>gi|87301113|ref|ZP_01083954.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 5701]
 gi|87284081|gb|EAQ76034.1| putative riboflavin kinase/FAD synthase [Synechococcus sp. WH 5701]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/315 (31%), Positives = 151/315 (47%), Gaps = 15/315 (4%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPI 69
           +S    ++   VA+G+FDG+H GH  ++             TV+SF PHPR ++    P 
Sbjct: 31  RSPQEAMRPTAVALGSFDGLHQGHRRVIAAIAAAPTPGLIPTVVSFWPHPRELLYGE-PR 89

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L  P  +  +LE  G   L+   FT   +  S E F+++VLV  L+ + V  G  FRF
Sbjct: 90  LRLDLPGEKLALLEPYGIRQLVLVPFTRALSLLSPEAFVEQVLVGELQAREVAVGENFRF 149

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G DRAGD   L++ G ++G     +  +  + ++ +SSS IR AL  G +  A  LL   
Sbjct: 150 GHDRAGDTASLREIGGRHGLRV-LVSSMLWDGAERISSSRIRRALAAGAIDEANRLLERP 208

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ-----------TS 237
           +     V+ G  +GR L +PTAN+Q+     L +EGVYA   R  +              
Sbjct: 209 YRFSGRVVRGRGLGRQLSWPTANLQVDGRKFLPQEGVYAAWVRNLEPAEGGEALQPCGAP 268

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            + V N G  PT+ P  P  +E  + D + E+ G+   V     LR + +F  +E+L   
Sbjct: 269 MAAVMNLGPQPTVDPLAPSAVEVHLLDRALELVGRDLEVEPVQLLRRQQRFAGLEELSCQ 328

Query: 298 MGEDEKKARKILESS 312
           +G D   AR +L  S
Sbjct: 329 IGVDAALARSLLNRS 343


>gi|15900977|ref|NP_345581.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae TIGR4]
 gi|111658015|ref|ZP_01408719.1| hypothetical protein SpneT_02000812 [Streptococcus pneumoniae
           TIGR4]
 gi|14972585|gb|AAK75221.1| macrolide-efflux protein [Streptococcus pneumoniae TIGR4]
          Length = 305

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKNY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|15903061|ref|NP_358611.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae R6]
 gi|116517107|ref|YP_816469.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae D39]
 gi|148985083|ref|ZP_01818326.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP3-BS71]
 gi|148989154|ref|ZP_01820544.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP6-BS73]
 gi|149003772|ref|ZP_01828604.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP14-BS69]
 gi|149012894|ref|ZP_01833807.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP19-BS75]
 gi|149024912|ref|ZP_01836313.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP23-BS72]
 gi|168486475|ref|ZP_02710983.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1087-00]
 gi|168493054|ref|ZP_02717197.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC3059-06]
 gi|169832490|ref|YP_001694531.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae Hungary19A-6]
 gi|182684141|ref|YP_001835888.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae CGSP14]
 gi|221231847|ref|YP_002510999.1| riboflavin biosynthesis protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854606|ref|YP_002736118.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae JJA]
 gi|225858920|ref|YP_002740430.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae 70585]
 gi|225861073|ref|YP_002742582.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|237822366|ref|ZP_04598211.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229875|ref|ZP_06963556.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254155|ref|ZP_06977741.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502873|ref|YP_003724813.1| FAD synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254182|ref|ZP_07340294.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae BS455]
 gi|303259773|ref|ZP_07345748.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP-BS293]
 gi|303262948|ref|ZP_07348883.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264910|ref|ZP_07350826.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS397]
 gi|303266891|ref|ZP_07352769.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS457]
 gi|303268927|ref|ZP_07354712.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS458]
 gi|307127359|ref|YP_003879390.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           670-6B]
 gi|15458634|gb|AAK99821.1| Macrolide-efflux protein [Streptococcus pneumoniae R6]
 gi|116077683|gb|ABJ55403.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae D39]
 gi|147758218|gb|EDK65220.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP14-BS69]
 gi|147763183|gb|EDK70123.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP19-BS75]
 gi|147922781|gb|EDK73898.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP3-BS71]
 gi|147925377|gb|EDK76455.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP6-BS73]
 gi|147929535|gb|EDK80529.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP23-BS72]
 gi|168994992|gb|ACA35604.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182629475|gb|ACB90423.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae CGSP14]
 gi|183570529|gb|EDT91057.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC1087-00]
 gi|183576605|gb|EDT97133.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674307|emb|CAR68850.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           ATCC 700669]
 gi|225721286|gb|ACO17140.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           70585]
 gi|225724053|gb|ACO19906.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae JJA]
 gi|225727774|gb|ACO23625.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238468|gb|ADI69599.1| possible FAD synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794223|emb|CBW36643.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           INV104]
 gi|301800075|emb|CBW32672.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           OXC141]
 gi|301802001|emb|CBW34730.1| putative riboflavin biosynthesis protein [Streptococcus pneumoniae
           INV200]
 gi|302598853|gb|EFL65887.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae BS455]
 gi|302635925|gb|EFL66425.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638978|gb|EFL69438.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae SP-BS293]
 gi|302641545|gb|EFL71907.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS458]
 gi|302643589|gb|EFL73858.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS457]
 gi|302645598|gb|EFL75829.1| riboflavin kinase/flavin adenine dinucleotide synthase
           [Streptococcus pneumoniae BS397]
 gi|306484421|gb|ADM91290.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           670-6B]
 gi|332075064|gb|EGI85535.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA17545]
 gi|332200512|gb|EGJ14584.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA41317]
          Length = 305

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|315222694|ref|ZP_07864583.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           F0211]
 gi|315188380|gb|EFU22106.1| riboflavin biosynthesis protein RibF [Streptococcus anginosus
           F0211]
          Length = 310

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I+  + +   ++  V+ +G FDG+H GH  +  +A K     +  I VL+F   
Sbjct: 1   MKTIR-IKNEKDI-QQIEHTVLVLGYFDGLHKGHQALFAEARKMAAEKHLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  + + +E +G   L    FT + A  +AEQF +K  +  L
Sbjct: 59  PKLAFVRYQPSLMLHLTSPEDRLQQMENLGVDYLYLIDFTSQFARNTAEQFFEKY-ISRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K VI G  + FG DR      L+K    +    + +  + N   + VSS+ IR  +  
Sbjct: 118 KAKVVIAGFDYHFGSDRR-SAEDLKKL---FDGQVIVVPSV-NFNGEKVSSTRIRETVLA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  +  LLGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +       
Sbjct: 173 GNVAESNQLLGYSLSTRGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVEHNG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E+ IF+FSQ+IYG    + + D +R  +KF ++++L 
Sbjct: 232 KVYRGMASVGKNVTFEGD-ELRFEANIFEFSQDIYGDTIRIFWLDKIRDMVKFDNVDELV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ AR  
Sbjct: 291 KQLQVDKEIARYW 303


>gi|160940471|ref|ZP_02087816.1| hypothetical protein CLOBOL_05361 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437051|gb|EDP14818.1| hypothetical protein CLOBOL_05361 [Clostridium bolteae ATCC
           BAA-613]
          Length = 346

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/298 (31%), Positives = 149/298 (50%), Gaps = 7/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  +V +G FDG H GH  +L   +++      P  + +F   P T +    P   ++  
Sbjct: 44  EPTIVTLGKFDGRHRGHQKLLRTMMELKEATGYPTAIFTFGTAPGTAVTG-KPQTVITTN 102

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +   +EK+G   L+ Y FT ET +   E F++ +L   +  + ++ G    FG   AG
Sbjct: 103 LERRANMEKVGIDYLVEYPFTEETRHMEPEAFVKDILAGRMHAREIVVGPDCSFGYKGAG 162

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L       G+H   I++ ++++ + +SS+ IR  L KG+V  A  LLG  + I  +
Sbjct: 163 SAELLSAMARDLGYHLHVIEKEKDHR-RDISSTYIREELEKGNVEKANQLLGQPYAIHGE 221

Query: 196 VIHGEKIGRTL-GFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           V+HG  IG +L GFPTAN+   P   L + GVY  R    D   Y GV N G+ PT+   
Sbjct: 222 VVHGNHIGGSLLGFPTANILPPPIKRLPRYGVYVSRVLV-DGVYYKGVTNIGKKPTVGGE 280

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            P  +E++IF    +IYG+   V    + RPE KF   E+LK  + +D++ A    E+
Sbjct: 281 YPAGVETYIFGLEGDIYGKNIEVQLLAFDRPEQKFTSFEELKERIEKDKEFANAYYEN 338


>gi|262374479|ref|ZP_06067753.1| riboflavin biosynthesis protein RibF [Acinetobacter junii SH205]
 gi|262310475|gb|EEY91565.1| riboflavin biosynthesis protein RibF [Acinetobacter junii SH205]
          Length = 333

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 34/333 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNP 57
           M +   + +N   P+  L    V IGNFDG+HLGH  ++ Q      A      V+ F P
Sbjct: 1   MKL---LRLNALSPDFQLPPSAVTIGNFDGVHLGHQAMIAQLKTLADAKGLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       +S    + + L ++G   +   KF     + +A +F + + +  L 
Sbjct: 58  QPLEFFKGYDAPPRISSLREKVEYLTELGVDYIAVAKFDQYFRSLNATEFAELLKL-KLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            ++++ G  F FGKDR G+   L+     YGF    ++ +  N  + VSS+ IR  L  G
Sbjct: 117 AQSLVLGDDFHFGKDRQGNSEFLR----DYGFDVTNLNTVALN-GERVSSTRIRQVLQAG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD--- 234
            +  AA LLG  ++I   V +G++IGRTL FPT N++L+       G+YA+    ++   
Sbjct: 172 DLALAAKLLGRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLSGIYAVDVVCENASL 231

Query: 235 ------------------QTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                               S  G  + G  P +  + P   LE    D S  +YG    
Sbjct: 232 TAKIQHIDTELNGIAGYQADSLFGAGHVGTRPAIQQDHPEWRLEVHFPDVSANLYGLLMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           V+F  YL  E+ +  +E LK  + +D +K R  
Sbjct: 292 VTFLHYLHGELNYPSLEALKAGIDDDVQKLRDY 324


>gi|254303699|ref|ZP_04971057.1| riboflavin kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323891|gb|EDK89141.1| riboflavin kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 319

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++++ IK A        V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLIKETIKAARENGKQAVVFTFEKH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++    +  +LE +G   +I  K   E   Y+  +F++ +L   L+V
Sbjct: 58  PMEVLFPERKFEYINTNEEKLYLLESLGVDVVIMQKVNQEFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +     ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKVEDLEYLAEVHNIKVTELPPV-TLDGELVSSSAIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--T 236
              A   L +   +  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+   
Sbjct: 176 FEGAIKFLDHPMLVIGEVIHGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGDKNSK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE+ I DF++E+YG++  +    ++R E KF  +++LK 
Sbjct: 236 VLYGVVNVGYNPTLK--QEISLEAHILDFNREVYGEKVYIQIVKFMRKEKKFSSVDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|148998380|ref|ZP_01825822.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576165|ref|ZP_02722059.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           MLV-016]
 gi|194398283|ref|YP_002037738.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae G54]
 gi|307067708|ref|YP_003876674.1| FAD synthase [Streptococcus pneumoniae AP200]
 gi|147755777|gb|EDK62822.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP11-BS70]
 gi|183578016|gb|EDT98544.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           MLV-016]
 gi|194357950|gb|ACF56398.1| macrolide-efflux protein [Streptococcus pneumoniae G54]
 gi|306409245|gb|ADM84672.1| FAD synthase [Streptococcus pneumoniae AP200]
          Length = 305

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|168492005|ref|ZP_02716148.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC0288-04]
 gi|183573787|gb|EDT94315.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           CDC0288-04]
          Length = 305

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPIEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|153937918|ref|YP_001391712.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum F str. Langeland]
 gi|152933814|gb|ABS39312.1| riboflavin biosynthesis protein RibF [Clostridium botulinum F str.
           Langeland]
 gi|295319739|gb|ADG00117.1| riboflavin biosynthesis protein RibF [Clostridium botulinum F str.
           230613]
          Length = 306

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 85/293 (29%), Positives = 152/293 (51%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K+A +      VL+F  HP   I        L    
Sbjct: 15  KTYIALGSFDGLHKGHMKLIKEIKKMAKDNSGKSMVLTFKDHPLNTINKDLAPKILLDNP 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KIL++ G   +    F  E      E FI+K+ + +      + G  +RFG    GD
Sbjct: 75  SKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKM-IYYYNAGGFVVGFNYRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  A  +LG  + ++ +
Sbjct: 134 IELLDKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 193 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTV-EDK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF+++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 251 KLNIETHILDFNKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKNFAKR 303


>gi|289167995|ref|YP_003446264.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mitis B6]
 gi|288907562|emb|CBJ22399.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mitis B6]
          Length = 305

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAAMKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +AE+F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSKFASLTAEEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGELLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 DQLKADEEVARNW 304


>gi|329116065|ref|ZP_08244782.1| riboflavin biosynthesis protein RibF [Streptococcus parauberis NCFD
           2020]
 gi|326906470|gb|EGE53384.1| riboflavin biosynthesis protein RibF [Streptococcus parauberis NCFD
           2020]
          Length = 310

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +   I+  + +    K  V+ +G FDG+H GH  + ++A       N  I  L+FN  
Sbjct: 1   MKI-QQIKSYKDISEDDK-TVLVLGYFDGLHRGHKALFDKAKSLAKKENLKIVSLTFNET 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      +P   L  + P  + +   + G   L    FT   +  +++ FI+   +  L
Sbjct: 59  PKLAFAKYNPELLLHITYPEKRYQKFSEHGVDHLYLIDFTTAFSKITSDDFIKNY-IGSL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  ++FG +R  +   LQ     +      IDE+  N  + +SS+ IR A+  
Sbjct: 118 NAKYIVVGFDYKFGHNRT-NSDYLQ---RNFDGKVYTIDEVSFN-GRKISSTWIREAIKS 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY FT    V+HG+  GRTLGFPTAN+  +    L  +GVY        +
Sbjct: 173 GDVNAANQLLGYDFTTRGMVVHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVLVNGR 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T   +  L LE  IFDF  +IYG+   + + D +R   KF+ IE L 
Sbjct: 233 I-YRSMTSIGKNITFGGD-ELRLEVNIFDFDGDIYGESLEIIWLDKIRDMAKFEGIEDLI 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DQLNNDKEIALNW 303


>gi|332075444|gb|EGI85913.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA41301]
          Length = 305

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYIVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|298345255|ref|YP_003717942.1| putative FAD synthetase [Mobiluncus curtisii ATCC 43063]
 gi|298235316|gb|ADI66448.1| possible FAD synthetase [Mobiluncus curtisii ATCC 43063]
          Length = 331

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 21/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F         P++    +V IG FDG+H GH  I+E+ +     +     VL+F+P 
Sbjct: 1   MQIFR------DKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +         +   + +   +E++G       ++ L+ A  S  +F+ K LV  L  
Sbjct: 55  PRQVHHPDPKNKLICSLADRLTRIEQLGVDTTWVQQYDLDFAAQSPAEFVHKYLVAPLRP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
           + V+ G   RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G
Sbjct: 115 EVVVIGEDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ--- 233
            V  AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 RVDQAAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPP 234

Query: 234 ------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEI 286
                          + G +P     G   +E+ +      ++YG+   + F   +R  +
Sbjct: 235 HSKTPSSLEVVPAAISVGTSPHFGDVG-RTVEAHVLGRADLDLYGEEVVIEFVHRIRDNL 293

Query: 287 KFKDIEKLKIYMGED 301
            F  ++ L   M  D
Sbjct: 294 AFDSLDALLERMDCD 308


>gi|224540973|ref|ZP_03681512.1| hypothetical protein CATMIT_00124 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526124|gb|EEF95229.1| hypothetical protein CATMIT_00124 [Catenibacterium mitsuokai DSM
           15897]
          Length = 309

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/303 (32%), Positives = 154/303 (50%), Gaps = 12/303 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V    E N   P       +AIG FDG+HLGH  ++ + +K    +   V+SF+ HP 
Sbjct: 1   MKVIKMEEANLKEPLS-----LAIGFFDGLHLGHMSLINEVLKYKGETKTAVMSFDVHPL 55

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++       ++     +++LEKMG   L+   FT E A  S + FI +  +  L +K 
Sbjct: 56  CVLKGEKRQSIITLEEK-KELLEKMGIDYLLVIHFTKEVAALSPQAFIDEY-LNKLPLKR 113

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FG   +G+   L    +K  F  +  D +  N+++ VSS+ I+  + +G + 
Sbjct: 114 LVCGYDFHFGDHNSGNIEDL----KKQSFDLIVKDAVMYNETEKVSSTLIKKLMDQGMIA 169

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
               LL   + ++  VIHG++ GR +GFPT N+      L K GVY       +   Y G
Sbjct: 170 EVNTLLDRPYQVKGTVIHGKQRGRLIGFPTLNIDYGMKYLPKRGVYGTIVEI-NHRYYIG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +AN G NPT      L LE  +FDF++++YG+   V+F+ Y R E  F  +E LK  + E
Sbjct: 229 MANIGMNPTFNDISRLSLEVNVFDFNEDVYGKEVEVTFYLYKREETVFNGLEGLKTQLTE 288

Query: 301 DEK 303
           D+K
Sbjct: 289 DKK 291


>gi|326803568|ref|YP_004321386.1| riboflavin biosynthesis protein RibF [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650640|gb|AEA00823.1| riboflavin biosynthesis protein RibF [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 318

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 157/318 (49%), Gaps = 13/318 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNP 57
           M V   +  I+Q+L N+ +G V+A+G FDG+H GH  +++ A K       P+ V++FN 
Sbjct: 1   MQVITIHHPIDQNLKNN-EGIVLALGFFDGVHRGHQAVIKAARKEAFKRKLPLAVMTFNI 59

Query: 58  HPRTI---IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
            P  +   +  +  +  L+    +  +LE  G   +    +T   +N S + F+   LV 
Sbjct: 60  SPLIVNQDLHPNQ-MKYLTQNQEKMLLLETFGVDRVYLVDYTSAFSNQSPKAFVDNYLV- 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  K V+ G  + +G     +   L    E   F  + +  + N  +  ++S  IR  L
Sbjct: 118 GLNAKVVVAGFDYTYGAKAIANMKNLPDYAEDR-FKIIEV-PVLNENNNKIASKQIRKEL 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQ 233
           T+G +  A   LGY +     VI+G K GRTLGFPTAN+   +  ++ K GVY ++ +  
Sbjct: 176 TEGSLEEANQALGYPYFFRGLVINGFKRGRTLGFPTANIYTQASTLIPKVGVYLVQCQI- 234

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           +   + G+A+ G N T   +    +E  +FDF  EIYG+   V +++YLR E KF  +E 
Sbjct: 235 NHQLFWGMASIGYNVTFGDDNDKTIEINLFDFESEIYGEEMLVFWYEYLRGEKKFSSVEA 294

Query: 294 LKIYMGEDEKKARKILES 311
           +   + +D+      L+ 
Sbjct: 295 MVEQLNQDKSDCLSRLQK 312


>gi|256847054|ref|ZP_05552500.1| riboflavin biosynthesis protein RibF [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715718|gb|EEU30693.1| riboflavin biosynthesis protein RibF [Lactobacillus coleohominis
           101-4-CHN]
          Length = 317

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 94/320 (29%), Positives = 157/320 (49%), Gaps = 9/320 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M           +       V+A+G FDG+H GH  +L  A +I    N P+ VL+++  
Sbjct: 1   MKEIRLKYPVDEVKTVPGPVVLAMGFFDGVHRGHQQVLATARRIAEQQNQPLAVLTYDKL 60

Query: 59  PRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P  + +    P+  L+    +  +L + G        FT      + + F+ +V++  L+
Sbjct: 61  PAIVFKQLEQPVRYLTSLDRKLHLLAEFGVDVAYVMDFTSMVGELAPQTFVDEVIM-KLQ 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR-NNKSQIVSSSNIRTALTK 176
             TV+ G    +G     +   L +  +   F    + +L  +N    +SS+ IR  + +
Sbjct: 120 PSTVVAGFDHTYGPKEIANMAKLPEYAQGR-FAIKTVSKLTNDNDETKISSTVIRQLIDQ 178

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQ 235
           G V NA  LLGYR+T    ++HG   GRT+GFPTAN+Q    + +   GVYA+R + Q+Q
Sbjct: 179 GAVANANQLLGYRYTTSGIIVHGFARGRTIGFPTANVQWPENERIPAVGVYAVRLKVQNQ 238

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             ++G+A+ G N T        +E  IFDF + IYG+   V +   LR E+KF D++ L 
Sbjct: 239 -WFNGMASVGYNVTFGKQTNKTIEVNIFDFHRHIYGEHVQVQWVQRLRDEVKFADVDDLV 297

Query: 296 IYMGEDEKKARKILESSYPL 315
             + +D+  + +IL +  PL
Sbjct: 298 EQLKKDQVASCRIL-NQQPL 316


>gi|315655676|ref|ZP_07908574.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii ATCC
           51333]
 gi|315489740|gb|EFU79367.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii ATCC
           51333]
          Length = 331

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 21/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F         P++    +V IG FDG+H GH  I+E+ +     +     VL+F+P 
Sbjct: 1   MQIFR------DKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +         +   + +   +E++G       ++ L+ A  S  +F+   LV  L  
Sbjct: 55  PRQVHHPDPKNKLICSLADRLTRIEQLGVDTTWVQQYDLDFAAQSPAEFVHNYLVAPLRP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
           + V+ G   RFG   +GD   L++ GE++GF    +  + +    +  SSS +R  L +G
Sbjct: 115 EVVVIGEDMRFGAQNSGDAQTLRELGEEFGFTVETVSNIVDPIFGRRWSSSWVRELLAQG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ--- 233
            V  AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 RVDQAAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPP 234

Query: 234 ------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEI 286
                          + G +P     G   +E+ +      ++YG+   + F   +R  +
Sbjct: 235 HSKTPSSLEVVPAAISVGTSPHFGDVG-RTVEAHVLGRADLDLYGEEVVIEFVHRIRDNL 293

Query: 287 KFKDIEKLKIYMGED 301
            F  ++ L   M  D
Sbjct: 294 AFDSLDALLERMDCD 308


>gi|255284458|ref|ZP_05349013.1| riboflavin biosynthesis protein RibF [Bryantella formatexigens DSM
           14469]
 gi|255265003|gb|EET58208.1| riboflavin biosynthesis protein RibF [Bryantella formatexigens DSM
           14469]
          Length = 317

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 23/313 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   V +G FDG+H GH  ++ +   K A       ++  P+P+           L+   
Sbjct: 14  RDTAVTLGKFDGLHRGHQELVRRICAKKAQGLESAAVTIWPNPK-------APALLT-KG 65

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++ +L+++G    I   F  + ++   E+F++++L + L  K +  G+ FRFG  R GD
Sbjct: 66  EKKALLKRLGVQWWIDCPFLPQISHMEPEEFVREILTKRLRAKYIAVGSDFRFGYQRRGD 125

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L +   + G+    + +    + + +SSS ++ AL +G +    +LLGY +T++ +V
Sbjct: 126 CALLLQMQAECGYELEVVPKECYGERE-ISSSYVKEALERGDMELVNNLLGYPYTVQGEV 184

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS-----------YSGVANF 244
           +HG +IGRTLG PT N+  S   +L   GVYA R   Q Q               G+ N 
Sbjct: 185 LHGRRIGRTLGMPTTNIIPSVGKLLPPNGVYASRTVIQPQAYGTEAAEEEPETLCGITNI 244

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G  PT+       +E+++FD+  ++YG+   V    Y RPE KF D+E LK  M  D + 
Sbjct: 245 GYKPTVGEYF-RGVETYLFDYEGDLYGRMIEVQLHAYERPEQKFPDMESLKAQMQRDIEF 303

Query: 305 ARKILESSYPLSE 317
            ++     +P+  
Sbjct: 304 GKEYFSERFPIIH 316


>gi|223557978|gb|ACM90984.1| riboflavin biosynthesis protein RibF [uncultured bacterium URE4]
          Length = 293

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/293 (30%), Positives = 152/293 (51%), Gaps = 9/293 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ-SSSPIFTLSPPSI 77
           +   G FDG+HLGH L++E+ + +A        V++F PHPR ++Q  +  +  L+    
Sbjct: 2   IATTGFFDGVHLGHRLVIERLVSLARERGDESLVVTFWPHPRAVLQDGARELRLLNSLEE 61

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++ +L  +G   +    FT   A  +AEQ+++ +L +   V T++ G   R G DR    
Sbjct: 62  KKGLLRNLGVDRVEVLDFTRSFAALTAEQYLRDILRDRFGVTTLLMGYDNRLGSDRL-TA 120

Query: 138 GILQKRGEKYGFHTVFIDELRNNKS-QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             L+      G   V ++     +  Q V+++ IR +L +G V  A+ +LGY + ++  V
Sbjct: 121 ASLKPIASSIGIELVELEPFGMGEHPQTVAATVIRKSLEEGKVETASEMLGYGYALKGVV 180

Query: 197 IHGEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           + G ++GRT+GFPTANM+L     ++   GVY +         Y G+ N G  PT+  + 
Sbjct: 181 VAGNRLGRTIGFPTANMKLYEPLKLVPGRGVYVVEAEVLG-KKYRGMTNIGLRPTVGGSF 239

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
              +E+ I DF ++IYG    ++F   LR E+ F  +E LK  + +D +  R+
Sbjct: 240 T-TIETHILDFDEDIYGLPLRITFLRRLRDEVHFPSLEALKDQLEKDRECCRE 291


>gi|262377099|ref|ZP_06070324.1| riboflavin biosynthesis protein RibF [Acinetobacter lwoffii SH145]
 gi|262307837|gb|EEY88975.1| riboflavin biosynthesis protein RibF [Acinetobacter lwoffii SH145]
          Length = 333

 Score =  275 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 30/314 (9%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           + L    V IGNFDG+HLGH  ++ Q   +  A      V+ F P P    Q       +
Sbjct: 13  SELPKTAVTIGNFDGVHLGHQAMIRQLQQVAKAQGLKSVVMIFEPQPLEYFQGYDAPPRI 72

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S    + + L ++G   +   KF     + +AE F   +L E L  + ++ G  F FGK+
Sbjct: 73  SSLREKVEYLTELGVDYIAVAKFDHTFRSLTAEAFAD-ILKEKLNARHLVLGDDFHFGKN 131

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G+   L+     YGF    ++ +     + VSS+ IR  L  G +  AA LLG  ++I
Sbjct: 132 RQGNSEFLRN----YGFEVTNLNTI-ALDGERVSSTRIRQTLQAGDLALAAQLLGRPYSI 186

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ------------------- 233
              V +G++IGRT+ FPT N++L+      +G+Y +    +                   
Sbjct: 187 TGRVQYGDQIGRTIDFPTINVRLNRHKPCLKGIYGVEVICETQSLKDKVKADSATQTGIA 246

Query: 234 --DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
             D T+  G  + G  P +    P   LE    + S  +YG    V+F +YL  E  +  
Sbjct: 247 GYDPTALFGAGHVGTRPAIKQAHPEWRLEVHFPNVSANLYGLLMRVTFLNYLHGEKDYPS 306

Query: 291 IEKLKIYMGEDEKK 304
           +E LK  + +D +K
Sbjct: 307 LEALKAGIDDDVEK 320


>gi|153812988|ref|ZP_01965656.1| hypothetical protein RUMOBE_03395 [Ruminococcus obeum ATCC 29174]
 gi|149830935|gb|EDM86025.1| hypothetical protein RUMOBE_03395 [Ruminococcus obeum ATCC 29174]
          Length = 310

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 16/299 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
             V +G FDGIH GH  +++  +           V++F           S   T+     
Sbjct: 16  CAVTLGKFDGIHRGHRKLIQTILNRKKEYGELAVVMAF----------VSDRQTILTSEE 65

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +LEKMG   L+      +  +  A+ FI+++L   L+   V+ G  FRFG +R G  
Sbjct: 66  RRILLEKMGVDILLECPLNDQIKHMKADVFIRQILKGDLQASCVVVGEDFRFGHERKGSP 125

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            +L+K GEKY + T+ I +     ++ +SS+ IR  L KG++   A LLG  F     + 
Sbjct: 126 ELLEKYGEKYDYETIVIAK-EMEGNRKISSTYIREELKKGNMEKIADLLGSPFFTAGVIE 184

Query: 198 HGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG  +G    FPTAN +     ++   GVY      +D   Y G+ N G  PT+  N  L
Sbjct: 185 HGRGMGHRDFFPTANIIPPKSKLMPPNGVYVTVSHLED-GDYPGITNVGYKPTVGENF-L 242

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
            +E+ +FD   ++YGQ+C V F+ Y+RPE KF   E LK  +  D +  +   +    L
Sbjct: 243 GVETNLFDCDLDLYGQKCRVDFYKYIRPEQKFTSFEALKAQIRRDIESGKNWFQEEKEL 301


>gi|315656410|ref|ZP_07909299.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492969|gb|EFU82571.1| riboflavin biosynthesis protein RibF [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 331

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 21/315 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F         P++    +V IG FDG+H GH  I+E+ +     +     VL+F+P 
Sbjct: 1   MQIFR------DKPSNFGPSIVTIGTFDGVHTGHKRIIEKVVTLAHQHEVASVVLTFDPL 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +         +   + +   +E++G  A    ++ L+ A  S  +F+   LV  L  
Sbjct: 55  PRQVHHPDPKNKLICSLADRLTRIEQLGVDATWVQQYDLDFAAQSPAEFVHNYLVAPLRP 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN-NKSQIVSSSNIRTALTKG 177
           + V+ G   RFG   +GD   L++ GE+ GF    +  + +    +  SSS +R  L +G
Sbjct: 115 EVVVIGEDMRFGAQNSGDAQTLRELGEESGFTVETVSNIVDPIFGRRWSSSWVRELLAQG 174

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ--- 233
            V  AA++LG+  ++   V+HG++ GR LGFPTAN+     + +  +GVYA   R     
Sbjct: 175 RVDQAAYVLGHAHSVRGTVVHGKRRGRELGFPTANLDADFIEAIPADGVYAGWLRMPYPP 234

Query: 234 ------DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEI 286
                          + G +P     G   +E+ +      ++YG+   + F   +R  +
Sbjct: 235 HSKTPSSLEVVPAAISVGTSPHFGDVG-RTVEAHVLGRADLDLYGEEVVIEFVHRIRDNL 293

Query: 287 KFKDIEKLKIYMGED 301
            F  ++ L   M  D
Sbjct: 294 AFDSLDALLERMDCD 308


>gi|229495812|ref|ZP_04389540.1| riboflavin biosynthesis protein RibF [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317386|gb|EEN83291.1| riboflavin biosynthesis protein RibF [Porphyromonas endodontalis
           ATCC 35406]
          Length = 323

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 11/312 (3%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTII 63
           + E  + LP  +   V  IG FDG+H GH  ++EQ    A     P  V++F+  P  ++
Sbjct: 15  SCESPELLPEQV---VATIGVFDGVHGGHRFLIEQLKHEAQRLRLPSAVITFDTPPVMVV 71

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           +   P   L+  + +E++L K G   L    F    A  SAE+F + ++   L V T++ 
Sbjct: 72  RPDHPFEKLNSNTEREQLLAKTGVDFLFLLPFDWALAALSAEEFFRHIITRQLHVHTLLM 131

Query: 124 GTKFRFGK-DRAGD-RGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGHVL 180
           G    FG+  +AGD     +  GEK+G   +  +   +  + +  SSS IR  L   ++ 
Sbjct: 132 GYDHHFGRPPKAGDPPTDYKSLGEKWGVRVLPQEPFFDEKEGKPYSSSRIRKLLRADNLS 191

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQTSY 238
            A  LLGY F I  +V  G  IG+TLGFPTAN+Q   +  ++   GVYA+      +  Y
Sbjct: 192 LANQLLGYNFRITGEVKGGLGIGKTLGFPTANIQPEDAHKLIPPLGVYAVWAH-LGEARY 250

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+   G  PT+       +E  +F+F   +Y ++  V    + R E +F   E+L   +
Sbjct: 251 GGMLYIGNRPTIADGLERTIEVNLFNFQGNLYDKKIAVELIAHTRGEARFSSYEELSQAL 310

Query: 299 GEDEKKARKILE 310
            +D +  + +L 
Sbjct: 311 RQDAEITQGLLS 322


>gi|226943308|ref|YP_002798381.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Azotobacter
           vinelandii DJ]
 gi|226718235|gb|ACO77406.1| riboflavin biosynthesis protein RibF [Azotobacter vinelandii DJ]
          Length = 274

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 2/249 (0%)

Query: 47  NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
             P  V+ F P PR           L+    + ++L   G   ++   F       SA  
Sbjct: 2   GLPSCVVIFEPQPREFFSPQRAPARLTRLREKLELLAAQGVDRVLCLAFNRRLCELSARA 61

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           F+Q VLVE L V+ +  G  FRFG DRAGD   L + G   GF       +  +    VS
Sbjct: 62  FVQSVLVEGLGVRHLEVGDDFRFGCDRAGDFEFLCQTGVAEGFTVEAAVTVEVD-GLRVS 120

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ +R AL+ G +  A  LLG  F++   V+HG+K+GR LG PTAN+QL    +   GVY
Sbjct: 121 STRLRAALSHGDLPLAERLLGRPFSLCGRVLHGQKLGRQLGTPTANVQLKRRRVPLTGVY 180

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
            +     D   + GVAN G  P++  +G   LE+ + DF+ ++YG+   V+F   LR E 
Sbjct: 181 LVSTE-LDGRRWPGVANIGVRPSVTGDGRAHLEAHLLDFAGDLYGRHLCVTFHHKLRDEE 239

Query: 287 KFKDIEKLK 295
           +F  ++ LK
Sbjct: 240 RFASLDALK 248


>gi|223984484|ref|ZP_03634617.1| hypothetical protein HOLDEFILI_01911 [Holdemania filiformis DSM
           12042]
 gi|223963555|gb|EEF67934.1| hypothetical protein HOLDEFILI_01911 [Holdemania filiformis DSM
           12042]
          Length = 318

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V  ++      P   +     IG FDG+H GH  ++++ I+ A        +++F+P 
Sbjct: 7   MKV--DMIKTHGEPVLNEPVCACIGYFDGLHRGHRALIDETIRRAKAAGCESALITFSPD 64

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   I     +  L+    + ++  KMG   +I   F  E A  S  +FI  +  E   +
Sbjct: 65  PWITIGRMQKVQHLTTLQQRIELAGKMGIDRVIVLDFVKEMAELSPSEFIDMLA-EHCRL 123

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  F +GK  +G    L+       F  V I+ + N++   +SSS I   L +G 
Sbjct: 124 KALICGFDFHYGKFGSGSVETLKAEAAGR-FDVVVIEAV-NDQGDKISSSRISRCLEQGD 181

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTS 237
           V  A  LLGY + I   V+HG + GR  GFPTAN++   + +L   GVYA    +    S
Sbjct: 182 VAEAGRLLGYPYEIRGVVVHGRQKGREWGFPTANLKTEEETLLPLGGVYAGEAESGG-RS 240

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + N G NPT  P   L +E+ + D +++ Y Q   + F+  LR E +F  +++L   
Sbjct: 241 WKAMINIGHNPTCNPVRELSVEANLLDCAEDFYDQPMRLRFYKRLRTERQFASLQELIEQ 300

Query: 298 MGEDEKKARKILES 311
           +  D++  R   + 
Sbjct: 301 LHRDQQAVRDYFQE 314


>gi|146318767|ref|YP_001198479.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis 05ZYH33]
 gi|145689573|gb|ABP90079.1| FAD synthase [Streptococcus suis 05ZYH33]
 gi|292558432|gb|ADE31433.1| FAD synthetase [Streptococcus suis GZ1]
          Length = 337

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 102/313 (32%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M++   I+    L N  +  V+ +G FDG+HLGH  +L++A K+A+   +TV  L+F   
Sbjct: 31  MNI-RTIKHYSEL-NQEEPTVLVLGYFDGLHLGHKALLDRARKVADEQGLTVTVLTFPES 88

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP  +  L+    +  +L+K G   LI   FT E AN + +QF+++  ++ L
Sbjct: 89  PRLAFSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMERY-IKGL 147

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  + FG  RA D   L +    +      + E+ +   + VSS+ IR A+  
Sbjct: 148 NAQILVAGFDYHFGNCRA-DVKDLTEL---FDGQVEIVSEV-SLGGEKVSSTRIRQAIQS 202

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D 
Sbjct: 203 GDVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DG 261

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L 
Sbjct: 262 KRYRAMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLM 320

Query: 296 IYMGEDEKKARKI 308
             M  DEK A + 
Sbjct: 321 EQMKSDEKFALQW 333


>gi|225856750|ref|YP_002738261.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae P1031]
 gi|225724451|gb|ACO20303.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           P1031]
          Length = 305

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GR +G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGKLLGAPLPSRGMVVHGNARGRIIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF  +++L 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+  R  
Sbjct: 292 DQLKADEEVTRNW 304


>gi|160946365|ref|ZP_02093574.1| hypothetical protein PEPMIC_00325 [Parvimonas micra ATCC 33270]
 gi|158447481|gb|EDP24476.1| hypothetical protein PEPMIC_00325 [Parvimonas micra ATCC 33270]
          Length = 308

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 8/294 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+GNFDG H GH  ++ +   +K+       V  F  H + +I   +    +     +
Sbjct: 18  VVALGNFDGFHRGHQKLILELNNVKLDKGYKSAVFLFENHTKDLIFHQNA-SRIMSFEDK 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
              LE      +   +F+ +  N S ++F+  + +  L +K ++ G  ++F K+R G+  
Sbjct: 77  LNKLESFKIDYVFSIEFSEKIKNLSPKEFLDFLTIN-LNIKHIVVGEDYKFSKNREGNTD 135

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            ++   ++       ID+LR +  + +SS+ I   +  G +  A  LLG  F+I+  V  
Sbjct: 136 FIKSYMKEKCLSCTIIDKLRYDNIE-ISSTKIIEYIKSGKIELANDLLGDNFSIKGKVTQ 194

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GR LG+PTAN+++S   +++KEGVY  +    D   Y   ++ G NPT   N    
Sbjct: 195 GFQRGRDLGYPTANLEISFNYVMVKEGVYFTK-TIVDGKGYFSFSSVGYNPTF-DNKKST 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +ES IFDF ++IYG+   + F + LR  IKF  +E+L   + +DE + R+++++
Sbjct: 253 IESHIFDFDKDIYGKDIELCFLERLRDNIKFNSVEELIEQLKKDEIRCRELIKN 306


>gi|147669222|ref|YP_001214040.1| riboflavin kinase / FMN adenylyltransferase [Dehalococcoides sp.
           BAV1]
 gi|146270170|gb|ABQ17162.1| riboflavin kinase / FMN adenylyltransferase [Dehalococcoides sp.
           BAV1]
          Length = 305

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/307 (31%), Positives = 148/307 (48%), Gaps = 8/307 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ 64
           +E    L    +  ++ IG FDG+HLGH  ++ +  K     N    +++F  HP  ++ 
Sbjct: 4   LEEELILHASDQDTLITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLG 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
               I  +     +   LE+MG   +I   FT E A   A  F+  + ++ L ++ ++ G
Sbjct: 64  QDD-IKLILSLEERNLALEQMGLDRIIMLSFTPEIAEICATDFVGYL-LDHLHMQGIVVG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           + F  G++RAGD   L++      F    +  +   ++QIVSS+ IR AL  G+V  A  
Sbjct: 122 SDFALGRNRAGDATALRRLSHIMDFSVSVVSPVVI-ENQIVSSTAIRQALRTGNVTKARL 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVAN 243
           +LG  + +   V  G   G  LGFPTAN+ L   + L  +GVYA +    +   Y  VAN
Sbjct: 181 MLGRNYHLRGTVQSGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLAE-KEYKAVAN 239

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT        LE  + DF  +I GQ   V F ++LR E+ F + E LK  +  D  
Sbjct: 240 IGSCPTF-GQEEHRLEVHLLDFKGDIKGQTLKVEFVEFLRSEVCFANAEALKAQISVDIL 298

Query: 304 KARKILE 310
           KAR IL 
Sbjct: 299 KARDILR 305


>gi|332366479|gb|EGJ44227.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1059]
          Length = 310

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 144/313 (46%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR     +       +    + I    N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKESHEL-----RDFFNGKIVIVPSVNLDNRKISSTRIRETIAA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + +   +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFDSIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|227486453|ref|ZP_03916769.1| possible FAD synthetase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235634|gb|EEI85649.1| possible FAD synthetase [Anaerococcus lactolyticus ATCC 51172]
          Length = 314

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 7/311 (2%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRT 61
               ++N  LP  L+  VV++G FDG+HLGH  ++++ + ++     T  +L F  + +T
Sbjct: 5   IRIYDLNSDLP-DLEKKVVSLGYFDGVHLGHQKLMKRNVDLSKKYGYTPSILLFKENTKT 63

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
            ++       LS    + +IL ++G        F       S   FI+ ++ E L  K +
Sbjct: 64  TVKDDK--RYLSSLEDKVEILSQLGIKTFCLVNFDENFMKLSPTDFIKTIIAEKLNAKII 121

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           I G  +RFG   +G    L++    + + T  +D    +    +SS ++R  +  G +  
Sbjct: 122 IVGDDYRFGYKASGTVDTLREYENIFAYITDVVDFEMEDDHAKISSGHLRNFIRNGEIKK 181

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSG 240
           A   LG  + I   V+HG++ GR L FPTAN+ LS P ++  +GVY      + +  Y G
Sbjct: 182 ANKYLGRPYKIRGKVVHGKRRGRLLNFPTANLDLSFPYVIPTDGVYLTITNIRGKDYY-G 240

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + N G NPT        +E+FIFDF+  IY +  +V F ++LRP+ KF   E+L   M +
Sbjct: 241 LTNIGSNPTFEEGDDKKIETFIFDFNDSIYDEDISVEFIEFLRPDFKFNSAEELIAQMDK 300

Query: 301 DEKKARKILES 311
           D++     +E 
Sbjct: 301 DKENGLNYIEK 311


>gi|238924300|ref|YP_002937816.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Eubacterium
           rectale ATCC 33656]
 gi|238875975|gb|ACR75682.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Eubacterium
           rectale ATCC 33656]
 gi|291525071|emb|CBK90658.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium rectale DSM
           17629]
          Length = 309

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 9/289 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR-TIIQSSSPIFTLSP 74
           +  V++ G FDG+H GH  ++E+ I+ +N       + +F+  P+  ++   S +  +  
Sbjct: 14  EPSVISFGKFDGLHRGHEFLMEKQIEQSNLHGYKRIIFTFDIPPKSEVLGVESKV--IIT 71

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E + EK G   LI   F  +     A+ F++ + V+ L VK +I G  FRFG +RA
Sbjct: 72  NDEKEYVFEKSGIDYLIECPFVPQVMTMEADAFVRWI-VKSLNVKCIIVGDDFRFGHNRA 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L     + G+  + +D++++   + +SS+ IR  +  GH+  A  LLGY F I+ 
Sbjct: 131 GDHRLLSAMAGELGYELIVVDKIKDGD-RDISSTYIREEIAAGHIKKANELLGYPFFIKG 189

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG  +GRT+G PT N+ +  D +L  +GVY  R   +D   Y GV N G  PT+   
Sbjct: 190 RVVHGRALGRTIGIPTVNLSVPHDKLLPPKGVYMSRVLVRDN-WYLGVTNIGCKPTIEGK 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            P+  E++I DF Q++YGQ   V    ++RPE+KF  IE LK  M  D 
Sbjct: 249 NPIGAETYIIDFGQDVYGQDIMVELHKFVRPEMKFDSIEALKSQMSADI 297


>gi|83648576|ref|YP_437011.1| riboflavin biosynthesis protein RibF [Hahella chejuensis KCTC 2396]
 gi|83636619|gb|ABC32586.1| riboflavin biosynthesis protein RibF [Hahella chejuensis KCTC 2396]
          Length = 276

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 2/266 (0%)

Query: 47  NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
             P  V+ F P PR   +       L     +   +  +    L+  +F       +A+Q
Sbjct: 2   GVPAVVMVFEPQPREFFEKLDAPPRLMRFREKLDAIAALNVDYLLCLQFNRRLRGLTAQQ 61

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           FI  VLV  L VK ++ G  FRFG DR+GD  +L+K G   GF       +   + + VS
Sbjct: 62  FIDDVLVTGLHVKHLVVGDDFRFGCDRSGDFRLLEKSGLVSGFSVENTPTV-EVEGERVS 120

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ IR  L +G    A  LLG  ++I   V+HG K+GR L  PTAN+ L     +  GVY
Sbjct: 121 STRIRATLAQGEFTQAEDLLGRPYSITGCVVHGRKLGRQLNAPTANVSLGRKRPVLSGVY 180

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
            ++          GVAN G  PT+   G    LE  +F+ + +IYGQR  V F + LR E
Sbjct: 181 LVKTTLATGHVRFGVANIGVRPTIDGLGVTPALEVHLFEHADDIYGQRINVQFLEKLRDE 240

Query: 286 IKFKDIEKLKIYMGEDEKKARKILES 311
            KF  +E+L+  +  D + A++ L+S
Sbjct: 241 RKFSGLEQLQAQIQRDIEGAKRRLQS 266


>gi|319441542|ref|ZP_07990698.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium variabile DSM 44702]
          Length = 340

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 40/348 (11%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHP 59
            +++ +E    +P  L G VV IG FDG+H GH  ++  A++ A     P  +++F+PHP
Sbjct: 4   DIWNGLE---QVPADLAGSVVTIGVFDGVHRGHQRLIASAVQRARDLGVPAVMVTFDPHP 60

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
               +  +    L+    +     + G  A++   F  E A ++ E++ ++V+V+ L  +
Sbjct: 61  TVFFRPEAIPPALASLEQRSVTAARYGIDAMLVINFDRELAGWTPEEYFERVIVDTLHAR 120

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK----------SQIVSSSN 169
           +V+ G  F FG   AG    ++  G+  G   +  D L +              +V S+ 
Sbjct: 121 SVVIGDNFTFGHLAAGTSDTMRTLGDARGVEVITHDLLTDAGDPALGGASAVDHVVCSTW 180

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSP-DILLKEGVYA 227
           IR  L +G V  A   LG  FT+   V     + G  LGFPTAN+       L  +GVYA
Sbjct: 181 IRDRLAEGDVAAAGRALGRNFTVRGVVTRGAGRGGAALGFPTANLYFPDAQALPSDGVYA 240

Query: 228 IRFRTQDQT---------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
              R                          + G NPT   +    +E+F+ D   ++YG+
Sbjct: 241 GDLRILPTHKDPAGELVGDMPVEVHMPAAISVGTNPTF-GDETRSVEAFVLDHEADLYGR 299

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
           + TVSF + +R    + D+++L   +  D  + R        L  RDR
Sbjct: 300 KVTVSFIERIRGMEAYGDLDQLITAINRDVSETR-------HLVPRDR 340


>gi|296327890|ref|ZP_06870426.1| riboflavin biosynthesis protein RibF [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155024|gb|EFG95805.1| riboflavin biosynthesis protein RibF [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 319

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++++AIK A        V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLIKEAIKAARENGKQAVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        ++    +  +LE +G   +I  K   +   Y+  +F++ +L   L+V
Sbjct: 58  PMEILFPEKKFDYINTNEEKLYLLESLGVDVVIMQKVDKDFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +  N  ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKAEDLEYLAEVHNIKVTELPPVTLN-GELVSSSVIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
              A   L +   +  +VIHG+KI R LGFPT N+++   +    G+Y    +  ++ S 
Sbjct: 176 FEGAIKFLDHPMLVIGEVIHGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGNKNSQ 235

Query: 238 -YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE  I DF++E+YG++  V    ++R E KF  I++LK 
Sbjct: 236 VLYGVVNVGYNPTLK--QEISLEVHILDFNKEVYGEKVYVQIVKFMRKEKKFSSIDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|330813621|ref|YP_004357860.1| riboflavin kinase / FMN adenylyltransferase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486716|gb|AEA81121.1| riboflavin kinase / FMN adenylyltransferase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 300

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 102/302 (33%), Positives = 161/302 (53%), Gaps = 5/302 (1%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           +L   ++  V+AIGNFDG+H GH  I +  + I   N     V++F P P    Q +   
Sbjct: 2   ALNKIVRNAVIAIGNFDGVHKGHQSIFKLGKKIAKRNKQKFGVITFAPLPYEFFQKNKKN 61

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             ++   ++  +++K     +   KF  + +  SAE FI +++++ L    +I G  FRF
Sbjct: 62  IRITLDDLKVDLIKKNDVDFVFICKFNKKFSMISAENFITEIVIKKLNPAHIIVGKNFRF 121

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G  R G+  +L+K G+ + F    +   + NK   +SS+ IR A+ KG+V  A  LLG  
Sbjct: 122 GNKRKGNIALLRKFGKVHNFKVSDLRLAKENK-TKISSTRIRLAIEKGNVDLAGRLLGRN 180

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           ++I   VI G K+GR LGF TAN+ +  +I  K GVYA++ + ++   Y+GVANFG  PT
Sbjct: 181 WSIREKVIPGRKVGRQLGFRTANIIIKNNIAPKTGVYAVKAKIKN-KIYNGVANFGLAPT 239

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              N  L+LE  +F      YGQ   ++F   LR E  FK+   L   + +D   A++IL
Sbjct: 240 FSRN-KLVLEINLFKKIPSFYGQFAEIAFVKRLRNEKSFKNKILLIRQIKKDITTAKEIL 298

Query: 310 ES 311
           + 
Sbjct: 299 KK 300


>gi|168180707|ref|ZP_02615371.1| riboflavin biosynthesis protein RibF [Clostridium botulinum NCTC
           2916]
 gi|226949767|ref|YP_002804858.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A2 str. Kyoto]
 gi|182668627|gb|EDT80606.1| riboflavin biosynthesis protein RibF [Clostridium botulinum NCTC
           2916]
 gi|226841191|gb|ACO83857.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A2 str.
           Kyoto]
          Length = 306

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 84/293 (28%), Positives = 149/293 (50%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K    N     VL+F  HP   I        L    
Sbjct: 15  KTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNTINKDLAPKILLDNP 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KIL++ G   +    F  E      E FI+K+ + +      + G  +RFG    GD
Sbjct: 75  SKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKM-IYYYNAGGFVVGFNYRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  +  +LG  + ++ +
Sbjct: 134 IELLDKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKSKKMLGRNYFLKGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 193 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTV-EDK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 251 KLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSFAKR 303


>gi|188586074|ref|YP_001917619.1| riboflavin biosynthesis protein RibF [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350761|gb|ACB85031.1| riboflavin biosynthesis protein RibF [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 316

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 96/314 (30%), Positives = 152/314 (48%), Gaps = 9/314 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +  +  + +   N  K   +++GNFDG+H+ H  IL   +K A     T  +L   PH
Sbjct: 1   MKLISDFNLTKD--NKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPH 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P     + S  F L+    +   +  +G    +  +F  E A  S  ++ + +  + L V
Sbjct: 59  PEIKFHNKSN-FLLTTLEEKINKISSLGIQVGVLKEFDREFAELSPREYSKWLC-DKLRV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + V  G  + FG+   G    LQ  G++ GF    I+ ++ + + IVSS   R  + +GH
Sbjct: 117 QGVSVGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGAIIVSSQLCRKYIREGH 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +  A  +L   +TI   V  G   G  LGFPTAN+++    I+ + GVY +R    +Q  
Sbjct: 177 INKANQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEV-NQNK 235

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G  PT      L+ E+F+ D  Q++Y +  TVSF D++R E KF D   L   
Sbjct: 236 YWGVCNVGNKPTF-SGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQ 294

Query: 298 MGEDEKKARKILES 311
           +  D K AR I+ +
Sbjct: 295 VNRDIKMARDIIAN 308


>gi|291529166|emb|CBK94752.1| riboflavin kinase/FMN adenylyltransferase [Eubacterium rectale
           M104/1]
          Length = 309

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 9/289 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPR-TIIQSSSPIFTLSP 74
           +  V++ G FDG+H GH  ++E+ I+ +N       + +F+  P+  ++   S +  +  
Sbjct: 14  EPSVISFGKFDGLHRGHEFLMEKQIEQSNLHGYKRIIFTFDIPPKSEVLGVESKV--IIT 71

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E + EK G   LI   F  +     A+ F++ + V+ L VK +I G  FRFG +RA
Sbjct: 72  NDEKEYVFEKSGIDYLIECPFVPQVMTMEADAFVRWI-VKSLNVKCIIVGDDFRFGHNRA 130

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +L     + G+  + +D++++  ++ +SS+ IR  +  GH+  A  LLGY F I+ 
Sbjct: 131 GDHRLLSAMAGELGYELIVVDKIKD-GARDISSTYIREEIAAGHIKKANELLGYPFFIKG 189

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG  +GRT+G PT N+ +  D +L  +GVY  R   +D   Y GV N G  PT+   
Sbjct: 190 RVVHGRALGRTIGIPTVNLSVPHDKLLPPKGVYMSRVLVRDN-WYLGVTNIGCKPTIEGK 248

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            P+  E++I DF Q++YGQ   V    ++RPE+KF  IE LK  M  D 
Sbjct: 249 NPIGAETYIIDFGQDVYGQDIMVELHKFVRPEMKFDSIEALKSQMSADI 297


>gi|73748442|ref|YP_307681.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. CBDB1]
 gi|289432489|ref|YP_003462362.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. GT]
 gi|73660158|emb|CAI82765.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. CBDB1]
 gi|288946209|gb|ADC73906.1| riboflavin biosynthesis protein RibF [Dehalococcoides sp. GT]
          Length = 305

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/307 (31%), Positives = 148/307 (48%), Gaps = 8/307 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQ 64
           +E    L    +  ++ IG FDG+HLGH  ++ +  K     N    +++F  HP  ++ 
Sbjct: 4   LEEELILHASDQDTLITIGVFDGVHLGHQHLINELKKQAKERNLQSCLITFKDHPSKVLG 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
               I  +     +   LE+MG   +I   FT E A   A  F+  + ++ L ++ ++ G
Sbjct: 64  QDD-IKLILSLEERNLALEQMGLDRIIMLSFTPEIAEICATDFVGYL-LDHLRMQGIVVG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           + F  G++RAGD   L++      F    +  +   ++QIVSS+ IR AL  G+V  A  
Sbjct: 122 SDFALGRNRAGDATALRRLSHIMDFSVSVVSPVVI-ENQIVSSTAIRQALRTGNVTKARL 180

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVAN 243
           +LG  + +   V  G   G  LGFPTAN+ L   + L  +GVYA +    +   Y  VAN
Sbjct: 181 MLGRNYHLRGTVQSGANRGTKLGFPTANLTLPGYLALPADGVYAAKAFLAE-KEYKAVAN 239

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT        LE  + DF  +I GQ   V F ++LR E+ F + E LK  +  D  
Sbjct: 240 IGSCPTF-GQEEHRLEVHLLDFKGDIKGQTLKVEFVEFLRSEVCFANAEALKAQISVDIL 298

Query: 304 KARKILE 310
           KAR IL 
Sbjct: 299 KARDILR 305


>gi|332361833|gb|EGJ39636.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK355]
          Length = 310

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAVEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDEQIARSW 304


>gi|331090937|ref|ZP_08339779.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405159|gb|EGG84695.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 305

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHP 59
           M     IE N + P+H     + +G FDG+H GH  ++EQ  K A+      V SF+  P
Sbjct: 1   MRYIRGIE-NYNCPSH---TAITLGKFDGLHRGHQKLIEQVKKHADGQIKSVVFSFDMFP 56

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               +      + L     +   LE+     L+   F  +     AE FI++VL++    
Sbjct: 57  --FFKELGKQNYILMTSEEKCLRLEEQ-VDYLVECPFVEKIHTMDAETFIKEVLMKKFHA 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V+ GT FRFG  + GD  +L+K  +  G+  + I++    + + +SS+ ++  + KG+
Sbjct: 114 KYVVVGTDFRFGYQKKGDIYLLEKYQQICGYKLIVIEKEMYGERE-ISSTFVKEEIHKGN 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTS 237
           +  A  LLGY +TI   V HGEK+GR LGFPT N+  + + LL   GVY +     D   
Sbjct: 173 MELAEKLLGYPYTILGTVEHGEKLGRKLGFPTMNVIPAEEKLLSPNGVY-VSSVMIDGKE 231

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+      L+E+F+FD+ ++ YG++  +  + ++R E KF  +  L+  
Sbjct: 232 YRGISNVGCKPTVSDKKEKLVETFLFDYDEDAYGKKIQIRLYSFVREEKKFSSVSALQKQ 291

Query: 298 MGEDEKKARKILES 311
           M  D +  +   + 
Sbjct: 292 MRSDIEMGKGFFKK 305


>gi|157151108|ref|YP_001450339.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075902|gb|ABV10585.1| riboflavin biosynthesis protein RibF [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 305

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M   H    N+      +  V+ +G FDG+H GH  +  +A +I       I VL+F   
Sbjct: 1   MKTIHI--SNEKDIQQTQDTVLVLGYFDGLHRGHQALFAEARQIAAEKKLKIAVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +E++LE  G   L    FT   A   A+ F +K  V+ L
Sbjct: 59  PKLAFVRYQPDLLLHLNSPEEREQLLEAQGVDYLYLIDFTSCFAGNKAKDFFEKY-VKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  + FG D+   + + Q    +     + I    N   + + S+ IR A+ +
Sbjct: 118 KARAVVAGFDYHFGSDKKEAKELSQFFDGQ-----IVIVSSVNEDDKKICSTRIRQAIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V +A  LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY +       
Sbjct: 173 GRVADATKLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVFLPGDGVYVVEVEHNG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E+ IFDFS++IYG    + + D +R  +KF  IE L 
Sbjct: 232 KRYKGMASVGKNVTFEGD-ELRFEANIFDFSRDIYGDTIKIYWLDKIRDMVKFDGIESLL 290

Query: 296 IYMGEDEKKARKI 308
             +  DE  AR  
Sbjct: 291 NQLKSDEAIARSW 303


>gi|313836840|gb|EFS74554.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA2]
 gi|314929748|gb|EFS93579.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL044PA1]
 gi|314972181|gb|EFT16278.1| riboflavin biosynthesis protein RibF [Propionibacterium acnes
           HL037PA3]
 gi|328907606|gb|EGG27370.1| riboflavin biosynthesis protein RibF [Propionibacterium sp. P08]
          Length = 300

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 91/297 (30%), Positives = 147/297 (49%), Gaps = 10/297 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             V IGNFDG+H GH  ++++A ++  +  + V++F PHP +++        L P   + 
Sbjct: 8   STVVIGNFDGVHRGHQALVQEAKRVDPDGCVVVVTFWPHPLSVLAPDRAPALLCPLERRI 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L+  G S +    FT E A+++   F+++V +  L+ + V+ G  FRFG+   G    
Sbjct: 68  EWLKDAGASEVRVVNFTPEIASWTPAVFVERV-LGPLQPRHVLVGQNFRFGRHAIGTPDA 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L + G  +G   V   +L       VSS+ +R  +  G V  AA LLG  F +   V+ G
Sbjct: 127 LTEMG--HGRFQVHAMDLVAISGVTVSSTRVREMVAAGKVAEAALLLGRPFEVGGVVVMG 184

Query: 200 EKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFR----TQDQTSYSGVANFGRNPTMVPNG 254
           ++ GR LGFPTAN+    D  +  +GVYA                   + G NPT     
Sbjct: 185 DQRGRELGFPTANLVAPRDRAVPSDGVYAGWLEPSGGLDAGRRLPSAISVGTNPTFEGV- 243

Query: 255 PLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E+++      E+YG   TV+F ++LR +IKF  IE L   M +D + A++ L 
Sbjct: 244 EQRVETYVIGRDDLELYGVDVTVTFAEWLRGQIKFDGIEPLISQMSDDVEAAKRALS 300


>gi|171779509|ref|ZP_02920473.1| hypothetical protein STRINF_01354 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282126|gb|EDT47557.1| hypothetical protein STRINF_01354 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 326

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M++ H I+  + + N  +  V+ +G FDG+H GH  + +QA  I   N   +TVL+FN  
Sbjct: 17  MNIQH-IKDARDI-NRTRDSVLVLGYFDGLHKGHKALFDQARSIANRNQLDLTVLTFNES 74

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR  +   +P   L  + P    +   + G   L    FT   +  S+E+F++   ++ L
Sbjct: 75  PRLALARFTPELLLNLTAPEKSYEKFAEYGVDDLYLVDFTSAFSKVSSEEFLRTY-IKAL 133

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +T++ G  ++FG DR  D   L    E +    + + E+++N  + +SSS IR  +  
Sbjct: 134 RARTIVVGFDYKFGHDRK-DAAHL---SEIFDGDVIVVPEVQDN-GEKISSSRIRQEILS 188

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G+V     LLGY F+ +  V+HG+  GRT+GFPTAN+ +   + L  +GVY         
Sbjct: 189 GNVSEVNRLLGYEFSTQGIVVHGDARGRTIGFPTANLAVLDRVYLPGDGVYVTDIIVSG- 247

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   + + D +R  IKF   ++L 
Sbjct: 248 KRYRSMTSIGKNVTF-GGQDLRLEANIFDFENDIYGETVEIIWLDKIRGMIKFAGADELV 306

Query: 296 IYMGEDEKKARKI 308
             +  D+K A+  
Sbjct: 307 EQLKSDKKFAQNW 319


>gi|168184620|ref|ZP_02619284.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Bf]
 gi|237795850|ref|YP_002863402.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum Ba4 str. 657]
 gi|182672254|gb|EDT84215.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Bf]
 gi|229261513|gb|ACQ52546.1| riboflavin biosynthesis protein RibF [Clostridium botulinum Ba4
           str. 657]
          Length = 306

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K    N     VL+F  HP   I        L    
Sbjct: 15  KTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKDHPLNTINKDLAPKILLDNP 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KIL++ G   +    F  E      E FI+K+ + +      + G  +RFG    GD
Sbjct: 75  SKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKM-IYYYNAGGFVVGFNYRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  A  +LG  + ++ +
Sbjct: 134 IELLDKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 193 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTV-EDK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF ++IYG+   +     +R E KF  +E+LK  + +D+  A++
Sbjct: 251 KLNIETHILDFHKDIYGENIVIYLSKRIRDEKKFSSLEELKKQLKKDKSFAKR 303


>gi|222153118|ref|YP_002562295.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus uberis 0140J]
 gi|222113931|emb|CAR42159.1| putative riboflavin biosynthesis protein [Streptococcus uberis
           0140J]
          Length = 313

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  Q +  + +  ++ +G FDG+HLGH  + +QA K+A      I  L+FN  
Sbjct: 1   MEITQ-IKSYQDIAENDE-TILVLGYFDGLHLGHKALFDQAKKLAEKESLKIVTLTFNES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      +P   L  + P  + +   + G   L    FT + +  S++ FI K  +  L
Sbjct: 59  PKLAFTRFTPDLLLHIAYPEKRYEKFSEYGVDHLYLIDFTTDFSKVSSDDFI-KYYIGQL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  +   LQ+  E        IDE+  +  + +SS+ IR  + +
Sbjct: 118 KAKYIVVGFDYKFGHNRT-NSDYLQRNFEG---KVYTIDEVSID-GRKISSTWIRELIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V     LLGY F+    V+HG+  GRTLGFPTAN+  +    L  +GVY +     + 
Sbjct: 173 GNVSKINQLLGYEFSTRGMVVHGDARGRTLGFPTANLAPIDRTYLPADGVY-VTDVIVNG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  + + G+N T      L LE+ IFDF ++IYG+   + +   +R   KF  IE L 
Sbjct: 232 KRHRSMTSIGKNVTF-GGTELRLEANIFDFDRDIYGESIEIIWLSKIREMTKFSGIEDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A + 
Sbjct: 291 DQLHADKQIALEW 303


>gi|309775467|ref|ZP_07670469.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916763|gb|EFP62501.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 319

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 13/313 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M   H +++    +   L      IG FDG+HLGH  ++E+   +    N+   +++F P
Sbjct: 6   MKEIHISLKQTPVVEESLTAC---IGYFDGLHLGHQKLIEEVKQVAEKRNTRSALITFEP 62

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P  +I+    I  ++P   + +I E MG    I   F+ E A+ + + F ++V ++ L 
Sbjct: 63  DPWCVIKGLREIAHITPMKQRMRIAEAMGIEYWIILDFSKEMADLTPQDFHERV-LKPLH 121

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + T++ G  F +G+   GD    ++   +  F    IDE+ +++ + +SS+ I   + +G
Sbjct: 122 LDTLVCGYDFHYGRKGEGDA---RQLQRQQDFEVHIIDEV-SSEHKKISSTRIEELIKEG 177

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT 236
            +  AA  +G  + +E  V  G ++GR  GFPTAN+ L    ++ K+GVY    + Q  T
Sbjct: 178 SMEKAARFMGRWYDMEGSVKGGSRVGRKHGFPTANLHLYELYVMPKKGVYVGAVKVQG-T 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            +  + N G NPT      L +E+ + DF ++IY +  T  F  Y+R E KF D + L  
Sbjct: 237 WHKAMINVGNNPTYNYQEQLSIEAHLLDFDRDIYDEPVTFRFLSYIREEQKFHDADALHE 296

Query: 297 YMGEDEKKARKIL 309
            + +D        
Sbjct: 297 QLKKDLAATHSYF 309


>gi|255320683|ref|ZP_05361860.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SK82]
 gi|255302299|gb|EET81539.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SK82]
          Length = 348

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 34/329 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M +   + +N  +P+  L    V IGNFDG+HLGH  ++ Q   +    N    V+ F P
Sbjct: 16  MKL---LRLNALMPDFQLPATAVTIGNFDGVHLGHQAMIAQLKTVAAQKNLKTLVMLFEP 72

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       +S    + + L ++G   +   KF  +  + SAE F   +L + L 
Sbjct: 73  QPLEYFKGYEAPPRISSLREKVEYLTELGVDYIAVAKFDDQFRSMSAEGFA-SLLKDKLH 131

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             +++ G  F FGK+R G+   L    + YGF    ++ + + + + VSS+ IR  L +G
Sbjct: 132 AHSLVLGDDFHFGKNRQGNSEFL----KNYGFAVTNLNTV-DFQGERVSSTRIRQVLQQG 186

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
            +  AA LLG  +++   + +G++IGRTL FPT N+ ++       G+YA+         
Sbjct: 187 DLTLAAQLLGRPYSMVGRIQYGDQIGRTLNFPTINVGMNRHKPCLHGIYAVEVISEHNSL 246

Query: 230 -------------FRTQDQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                               S  G  + G  P +    P   LE    + S  +YG    
Sbjct: 247 AARVRLEHPDLPGIAGYGPESLFGAGHVGTRPAIQQQQPEWRLEVHFPEVSANLYGLLVR 306

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           V+F  YL  E+ +  +E LK  +  D  K
Sbjct: 307 VTFLKYLHGEVNYPSLEALKTGIDNDVAK 335


>gi|320546829|ref|ZP_08041135.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equinus ATCC 9812]
 gi|320448525|gb|EFW89262.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equinus ATCC 9812]
          Length = 310

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 13/300 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTL--S 73
           +  V+ +G FDG+H GH  + +QA KI   +   +TVL+FN  PR  +   +P   L  +
Sbjct: 16  RDSVLVLGYFDGLHRGHKALFDQARKIAERDQLELTVLTFNESPRLALARFTPELLLNLT 75

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            P  +     + G   L    FT   +  S+++F++   ++ L  KT++ G  ++FG DR
Sbjct: 76  APQKRYGKFAEYGVDNLYLIDFTSSFSKGSSKEFLETY-IKALRAKTIVVGFDYKFGHDR 134

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   L    E +    + + E++ N  + +SS+ IR  +  G+V   + LLGY F+ +
Sbjct: 135 K-DANYL---SEIFDGQVIVVPEVQEN-GEKISSTRIRKEILSGNVSEVSRLLGYEFSTK 189

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+  GR++GFPTAN+ +   +    +GVY           Y  + + G+N T   
Sbjct: 190 GIVVHGDARGRSIGFPTANLAVLDRVYTPGDGVYVTDIIVSG-KRYRSMTSVGKNVTF-G 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
              L LE+ IFDF ++IYG+   + + D +R   KF   ++L   + +D+K A+  +++S
Sbjct: 248 GQDLRLEANIFDFQEDIYGETVEIIWLDKIRGMEKFSGADELVEQLKKDKKIAQNWIKNS 307


>gi|325661688|ref|ZP_08150311.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331084719|ref|ZP_08333807.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471941|gb|EGC75156.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330410813|gb|EGG90235.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 304

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/309 (30%), Positives = 146/309 (47%), Gaps = 10/309 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHP 59
           M     +E  Q      +   V +G FDG+H GH  ++ +     +      V +F+  P
Sbjct: 1   MQYVRELECYQ----EQRKAAVTLGKFDGLHRGHQKLVSRVKAHASKEVVSVVFAFDMAP 56

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
               +      +L     + + L+      LI   FT E +   AE FI++VLV+     
Sbjct: 57  L-YERLGKQKKSLMTGKERYEHLDGQ-TDYLIDCPFTEEISGMEAETFIKEVLVDQFHAA 114

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  GT F FG ++ GD  +L++    YG+    +D+    + + +SS+ I+  +  GH+
Sbjct: 115 YIAVGTDFHFGHEKRGDIHMLKQYAGIYGYELEVVDKELY-QGREISSTYIKEEVRAGHM 173

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
             A  LLGY + +   V HG K+GR LG PT N+      +    GVYA R R  D   Y
Sbjct: 174 EVARELLGYPYAMSGVVEHGRKLGRKLGIPTMNITPDIGKLAPPNGVYACRVRI-DGNYY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+ N G  PT+  +G L+LE  +F F +E YGQ   V    ++RPE KF  +E+LK  M
Sbjct: 233 QGIGNLGNKPTVDADGKLILEVNVFSFDRETYGQTIQVELLSFVRPERKFASVEELKSQM 292

Query: 299 GEDEKKARK 307
             D    ++
Sbjct: 293 EADIAAIKR 301


>gi|146320970|ref|YP_001200681.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis 98HAH33]
 gi|253751862|ref|YP_003025003.1| riboflavin biosynthesis protein [Streptococcus suis SC84]
 gi|253753685|ref|YP_003026826.1| riboflavin biosynthesis protein [Streptococcus suis P1/7]
 gi|145691776|gb|ABP92281.1| FAD synthase [Streptococcus suis 98HAH33]
 gi|251816151|emb|CAZ51775.1| putative riboflavin biosynthesis protein [Streptococcus suis SC84]
 gi|251819931|emb|CAR46020.1| putative riboflavin biosynthesis protein [Streptococcus suis P1/7]
 gi|319758217|gb|ADV70159.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus suis JS14]
          Length = 307

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/313 (32%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M++   I+    L N  +  V+ +G FDG+HLGH  +L++A K+A+   +TV  L+F   
Sbjct: 1   MNI-RTIKHYSEL-NQEEPTVLVLGYFDGLHLGHKALLDRARKVADEQGLTVTVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP  +  L+    +  +L+K G   LI   FT E AN + +QF+++  ++ L
Sbjct: 59  PRLAFSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMERY-IKGL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  + FG  RA D   L +    +      + E+ +   + VSS+ IR A+  
Sbjct: 118 NAQILVAGFDYHFGNCRA-DVKDLTEL---FDGQVEIVSEV-SLGGEKVSSTRIRQAIQS 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D 
Sbjct: 173 GDVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L 
Sbjct: 232 KRYRAMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLM 290

Query: 296 IYMGEDEKKARKI 308
             M  DEK A + 
Sbjct: 291 EQMKSDEKFALQW 303


>gi|332359774|gb|EGJ37589.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK49]
          Length = 310

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIADKQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  I  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELILHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTHELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|254445099|ref|ZP_05058575.1| riboflavin biosynthesis protein RibF [Verrucomicrobiae bacterium
           DG1235]
 gi|198259407|gb|EDY83715.1| riboflavin biosynthesis protein RibF [Verrucomicrobiae bacterium
           DG1235]
          Length = 315

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 148/295 (50%), Gaps = 4/295 (1%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPS 76
              +AIG FDG+H GH L++E A   A  S      L+F PHP  + +   P   +  P 
Sbjct: 20  PVHLAIGMFDGLHRGHRLVVESAKAAAKASGGVCGALTFWPHPSRLFRPDDPARMILSPE 79

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           ++   L K+G   ++   FT E A   AE F+  +     E+ +V  G  +RFG+ RAGD
Sbjct: 80  LKRLELGKLGLDFIVEEPFTREFAGIEAELFLSHLKSVLPELASVHAGENWRFGRGRAGD 139

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L ++GE+ G     ID L +  S+ VSS+ IR+ LT G +  A  LLGY +     V
Sbjct: 140 MTELARQGEETGILVNAIDCLESKDSR-VSSTRIRSLLTTGEIEEANALLGYDYYSIGTV 198

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
             G+++GRT+  PT N+    D+    GVYA+          Y  VANFG  PT+     
Sbjct: 199 TQGKRMGRTIDAPTLNLPFEGDLKPAYGVYAVSVSDVSLTKQYRAVANFGIRPTVEVTQK 258

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            LLE+F+ D     YG R  V +  +LR E KF  I+ LK  + +D  +A+   +
Sbjct: 259 PLLEAFLLDSCPFDYGHRLKVIWHSFLRQEQKFNGIDALKSQIAKDVIQAKAYFD 313


>gi|170754240|ref|YP_001781957.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum B1 str. Okra]
 gi|169119452|gb|ACA43288.1| riboflavin biosynthesis protein RibF [Clostridium botulinum B1 str.
           Okra]
          Length = 306

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 84/293 (28%), Positives = 151/293 (51%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K+A +      VL+F  HP   I        L    
Sbjct: 15  KTYIALGSFDGLHKGHMKLIKEIKKMAKDNSGKSMVLTFKDHPLNTINKDLAPKILLDNP 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KIL++ G   +    F  E      E FI+K+ + +      + G  +RFG    GD
Sbjct: 75  SKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKM-IYYYNAGGFVVGFNYRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  A  +LG  + ++ +
Sbjct: 134 IELLNKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 193 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTV-EDK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF+++IY +   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 251 KLNIETHILDFNKDIYEENIVIYFSKRIRDEKKFSSLEELKEQLKKDKNFAKR 303


>gi|309800245|ref|ZP_07694422.1| riboflavin biosynthesis protein RibF [Streptococcus infantis
           SK1302]
 gi|308116127|gb|EFO53626.1| riboflavin biosynthesis protein RibF [Streptococcus infantis
           SK1302]
          Length = 303

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/312 (31%), Positives = 157/312 (50%), Gaps = 14/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +   I+  + +       V+ +G FDG+HLGH  + E A  I       + +++FN  
Sbjct: 1   MIITVPIKTEKDIATP-GPNVLVLGYFDGVHLGHQKLFEIASNIAAEKRQGVALVTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  +   SP  +  +   S +E+ L++ G  +L    FT   AN +A++FI    V+  
Sbjct: 60  PKLTLNQYSPEHLLHILYASERERRLKRAGVESLYLMDFTSRVANMTAQEFIDT-FVKEA 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +  T++ G  +  G DR      L++    +    V +  + + K + +SS+ IR A+ +
Sbjct: 119 KADTIVVGFDYTLGSDRK-TAEDLKEL---FHGEVVIVPPVEDEKGK-ISSTRIRQAILE 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G V  A   LG+       V+HG   GRT+GFPTAN+  L    +  +GVYA+    Q +
Sbjct: 174 GDVKEAGKFLGFPLPTRGVVVHGNARGRTIGFPTANLVNLDRTYMPADGVYAVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T         E  IFDFS +IYG+   VS+ D +R  +KF  +++L 
Sbjct: 233 KVYRGMASLGKNETFDGEEERF-EVHIFDFSDDIYGETVIVSWLDRIRDMVKFDSVDQLV 291

Query: 296 IYMGEDEKKARK 307
             + EDEK ARK
Sbjct: 292 KQLEEDEKIARK 303


>gi|253755435|ref|YP_003028575.1| riboflavin biosynthesis protein [Streptococcus suis BM407]
 gi|251817899|emb|CAZ55665.1| putative riboflavin biosynthesis protein [Streptococcus suis BM407]
          Length = 307

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/313 (32%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M++   I+    L N  +  V+ +G FDGIHLGH  +L++A K+A+   +TV  L+F   
Sbjct: 1   MNI-RTIKHYSEL-NQEEPTVLVLGYFDGIHLGHKALLDRARKVADEQGLTVTVLTFPES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP  +  L+    +  +L+K G   LI   FT E AN + +QF+++  ++ L
Sbjct: 59  PRLAFSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFANNTPQQFMERY-IKGL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  + FG  RA D   L +    +      + E+ +   + VSS+ IR A+  
Sbjct: 118 NAQILVAGFDYHFGNCRA-DVKDLTEL---FDGQVEIVSEV-SLGGEKVSSTRIRQAIQS 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D 
Sbjct: 173 GDVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L 
Sbjct: 232 KRYRAMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLM 290

Query: 296 IYMGEDEKKARKI 308
             M  DEK A + 
Sbjct: 291 EQMKSDEKFALQW 303


>gi|227875836|ref|ZP_03993962.1| FMN adenylyltransferase / riboflavin kinase [Mobiluncus mulieris
           ATCC 35243]
 gi|269977472|ref|ZP_06184444.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris 28-1]
 gi|306819117|ref|ZP_07452831.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris ATCC
           35239]
 gi|227843584|gb|EEJ53767.1| FMN adenylyltransferase / riboflavin kinase [Mobiluncus mulieris
           ATCC 35243]
 gi|269934388|gb|EEZ90950.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris 28-1]
 gi|304648093|gb|EFM45404.1| riboflavin biosynthesis protein RibF [Mobiluncus mulieris ATCC
           35239]
          Length = 332

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 15/317 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQ 64
           ++I    P+     VV IG FDG+H+GH  I+ Q +++A         L+F+P PR + Q
Sbjct: 2   VQIFHESPSKFGPSVVTIGTFDGVHMGHQQIIRQVVELARENHLNSLALTFDPLPRQVHQ 61

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            S     +     +   L  +G  A     + L+ A  + + F+ K LVE L+ + ++ G
Sbjct: 62  PSPGNKLICTLGDRLLFLAALGLDATWVQHYDLDFAALTPKDFVVKCLVEPLQPRIIVVG 121

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGHVLNAA 183
              RFG   +G+   L + G KYGF    + ++ +   S+  SSS +R  L  G+V  A 
Sbjct: 122 KDTRFGAQNSGNIVTLTELGAKYGFAVQVVPDIIDPITSKRWSSSWVRRLLEAGNVDQAG 181

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ--------- 233
           ++LG    +   V+HG++ GR LGFPTAN+     + +  +GVYA   R           
Sbjct: 182 YVLGRPHQVRGLVVHGKQRGRQLGFPTANLDAEYVEAIPADGVYAGWVRRAYPHGSNHPT 241

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              +     + G +P     G   +E+ +       +YG+   V F   +R    F+ ++
Sbjct: 242 SLEALPAAISVGTSPHFGDVG-RTVEAHVLGRSDLNLYGEEIVVQFVHRIRENRAFESLD 300

Query: 293 KLKIYMGEDEKKARKIL 309
            L   M +D  +   +L
Sbjct: 301 ALLSRMDQDLLETATVL 317


>gi|325696839|gb|EGD38727.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK160]
          Length = 310

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  ++ 
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETISA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|295110269|emb|CBL24222.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus obeum
           A2-162]
          Length = 310

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 16/298 (5%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSP 74
           L    V +G FDGIH GH  ++   ++          V++F           S    +  
Sbjct: 13  LTKSAVTLGKFDGIHRGHRKLIRTILERKKEYGELAVVMAF----------VSDRQMIFT 62

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +   L KMG   L+      E  +  AE FI+++L   L+ + V+ G  FRFG +R 
Sbjct: 63  SEERRTYLAKMGVDVLLECPLNDEIKHMKAENFIRQILKGDLQAECVVVGEDFRFGYERK 122

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G   +LQK GEKY + TV I +     S+ +SS+ IR  L KG++     LLG  F +  
Sbjct: 123 GTPELLQKFGEKYEYETVVISK-EMEGSRKISSTYIREELKKGNMEKIRDLLGRPFCVSG 181

Query: 195 DVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            + HG  +G    FPTAN +     ++   GVY      +D   Y G+ N G  PT+  +
Sbjct: 182 RIEHGRGLGHRDFFPTANIIPPKSKLMPPNGVYVTMSHFED-GDYPGITNVGYKPTVGES 240

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             L +E+ +FD   ++YG+ CTV F+ + RPE KF   E LK  + +D +  ++  ++
Sbjct: 241 F-LGVETNLFDCDLDLYGRECTVDFYKFTRPEQKFTSFEALKAQIRKDIQSGKEYFQN 297


>gi|153814914|ref|ZP_01967582.1| hypothetical protein RUMTOR_01129 [Ruminococcus torques ATCC 27756]
 gi|317500426|ref|ZP_07958650.1| hypothetical protein HMPREF1026_00593 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089567|ref|ZP_08338466.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847945|gb|EDK24863.1| hypothetical protein RUMTOR_01129 [Ruminococcus torques ATCC 27756]
 gi|316898181|gb|EFV20228.1| hypothetical protein HMPREF1026_00593 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330404935|gb|EGG84473.1| riboflavin biosynthesis protein RibF [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 300

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 19/314 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHP 59
           M     IE    +    +   + +G FDG+H GH  ++++    +  N    + +F+ H 
Sbjct: 1   MEYITGIEQYAGI----EKTALTLGKFDGLHKGHQKLIDKICAYSGENCKSVLCAFDMH- 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                      +L     +   LE      LI Y FT E     AE FI+ +L E L   
Sbjct: 56  ---------RESLMTKQERRSHLEG-KIDCLIEYPFTKELREMEAEVFIKNILCEKLHAA 105

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ GT F FG ++ G+  +L+   EK G+    I++ R ++   +SS+ IR  L++G+V
Sbjct: 106 HIVVGTDFAFGHEKRGNTEMLKMFSEKGGYTLDVIEKERYDQIV-ISSTYIRDVLSQGNV 164

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSY 238
             AA LLGYR+ +   V HG ++GRTLGFPT N++     IL + GVY  R    D   Y
Sbjct: 165 TLAAELLGYRYGVTGIVRHGRQLGRTLGFPTMNVEPEEKKILPRFGVYVCRINI-DGKWY 223

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G+ N G  PT+      L+E F++D+  + YG+  TV F D+ RPEI+F  + +LK  +
Sbjct: 224 NGIGNVGVKPTVTEEHKRLVEVFVYDYEGDAYGKEITVEFCDFERPEIRFSSVNELKKQV 283

Query: 299 GEDEKKARKILESS 312
            +D +  +   ++S
Sbjct: 284 AKDLRYGKDYFKAS 297


>gi|19704042|ref|NP_603604.1| FMN adenylyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714236|gb|AAL94903.1| Riboflavin kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 319

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++++ IK A        V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLIKETIKAARENGKQAVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        ++    +  +LE +G   +I  K   +   Y+  +F++ +L   L+V
Sbjct: 58  PMEILFPEKKFDYINTNEEKLYLLESLGVDVVIMQKVDKDFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +  N  ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKAEDLEYLAEVHNIKVTELPPVTLN-GELVSSSVIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
              A   L +   +  +VIHG+KI R LGFPT N+++   +    G+Y    +  ++ S 
Sbjct: 176 FEGAIKFLDHPMLVIGEVIHGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGNKNSQ 235

Query: 238 -YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE  I DF++E+YG++  V    ++R E KF  I++LK 
Sbjct: 236 VLYGVVNVGYNPTLK--QEISLEVHILDFNKEVYGEKVYVQIVKFMRKEKKFSSIDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|325694318|gb|EGD36232.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK150]
          Length = 310

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|93006866|ref|YP_581303.1| riboflavin biosynthesis protein RibF [Psychrobacter cryohalolentis
           K5]
 gi|92394544|gb|ABE75819.1| FMN adenylyltransferase / riboflavin kinase [Psychrobacter
           cryohalolentis K5]
          Length = 347

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 34/320 (10%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFT 71
           P  L   V+ IGNFDG+HLGH  +L Q  ++    N    V+ F P PR     ++    
Sbjct: 22  PVALAPCVLTIGNFDGVHLGHQAMLTQVRELAKTRNLGSAVMIFEPQPREFFAPAAAPAR 81

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + ++ +L + G   LI   F  E  + SA+ F   +L + L V+ ++ G  F+FG 
Sbjct: 82  LTNLAEKQALLAEYGVETLIVAGFDNEFRSLSAQAFAD-ILAQRLNVQALVLGDDFKFGH 140

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLNAAHLLGYR 189
           DR GD   L+     YG H   +D + ++  +   +SS+ IR  L  G +  A  LLG  
Sbjct: 141 DRTGDSQFLR----DYGLHVTNLDTITDDNHKAARISSTRIRDLLLAGDINAANALLGRD 196

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT------------- 236
           + I   V+ G+KIGRT+ FPTAN+ L        G++A+   + D               
Sbjct: 197 YAITGTVVGGDKIGRTMDFPTANIDLKRIKPALHGIFAVDVVSLDNDGNVIPSDLVRRAD 256

Query: 237 ------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                       S  G AN G  P++       LE        ++YG    V F  YL  
Sbjct: 257 DGHKGIAGLQAHSLFGTANIGTRPSVDKTHDWRLEVHFPQLQADLYGLTLQVRFLHYLHG 316

Query: 285 EIKFKDIEKLKIYMGEDEKK 304
           E  ++ ++ LK  +  D ++
Sbjct: 317 ERHYESLDALKEGIHHDVQE 336


>gi|325689916|gb|EGD31920.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK115]
          Length = 310

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P+  L  + P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLSFVRYQPVLMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|262380685|ref|ZP_06073838.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SH164]
 gi|262297633|gb|EEY85549.1| riboflavin biosynthesis protein RibF [Acinetobacter radioresistens
           SH164]
          Length = 333

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 34/329 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNP 57
           M +   + +N  +P+  L    V IGNFDG+HLGH  ++ Q   +    N    V+ F P
Sbjct: 1   MKL---LRLNALMPDFQLPATAVTIGNFDGVHLGHQAMIAQLKTVAAQKNLKTLVMLFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       +S    + + L ++G   +   KF  +  + SAE F   +L + L 
Sbjct: 58  QPLEYFKGYEAPPRISSLREKVEYLTELGVDYIAVAKFDDQFRSMSAEGFA-SLLKDKLH 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             +++ G  F FGK+R G+   L    + YGF    ++ + + + + VSS+ IR  L +G
Sbjct: 117 AHSLVLGDDFHFGKNRQGNSEFL----KNYGFAVTNLNTV-DFQGERVSSTRIRQVLQQG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR-------- 229
            +  AA LLG  +++   + +G++IGRTL FPT N+ ++       G+YA+         
Sbjct: 172 DLTLAAQLLGRPYSMVGRIQYGDQIGRTLNFPTINVGMNRHKPCLHGIYAVEVISEHNSL 231

Query: 230 -------------FRTQDQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                               S  G  + G  P +    P   LE    + S  +YG    
Sbjct: 232 AARVRLEHPDLPGIAGYGPESLFGAGHVGTRPAIQQQQPEWRLEVHFPEVSANLYGLLVR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           V+F  YL  E+ +  +E LK  +  D  K
Sbjct: 292 VTFLKYLHGEVNYPSLEALKTGIDNDVAK 320


>gi|323351789|ref|ZP_08087443.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           VMC66]
 gi|322122275|gb|EFX94001.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           VMC66]
          Length = 310

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 147/313 (46%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLENLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + +   +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|312880108|ref|ZP_07739908.1| riboflavin biosynthesis protein RibF [Aminomonas paucivorans DSM
           12260]
 gi|310783399|gb|EFQ23797.1| riboflavin biosynthesis protein RibF [Aminomonas paucivorans DSM
           12260]
          Length = 350

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 89/307 (28%), Positives = 146/307 (47%), Gaps = 13/307 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++A+G+FDG H GH L+L+ A K      +P  VL+F+ HP++++Q   P   L     +
Sbjct: 2   ILALGSFDGFHRGHQLLLQGARKRAAEKKTPWGVLTFSCHPQSVLQG-HPYPLLFLEKER 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +    G    +   F    A  S E F+  +         ++ G  FRFGK R G   
Sbjct: 61  QLLAAYWGIPRFLVIPFDRALAELSPEGFLDYLD-RRFSPTGLVVGENFRFGKGRGGTPE 119

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           IL++  +   +    I  L   + + +SSS IR ++  G +  AA  LG+ F ++  V  
Sbjct: 120 ILRRLCDARHWSLDVIPSL-YWQDRPISSSQIRESVRSGRLEEAAACLGHPFLVQGTVTR 178

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G++ GR LGFPTAN+ L P+ ++ + GVY       +   ++G  N G NPT      L 
Sbjct: 179 GDQRGRELGFPTANLALKPEKIVPDRGVY-GACVWAEGAWWTGALNVGFNPTFDGIRGLR 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
            E  +   S ++YG+   V     +R E++F D   L   M +D +  R+        ++
Sbjct: 238 FEVHLLGASLDLYGKPLWVFPLRKVREELRFPDRGSLIRQMEKDVETIRRW------KAQ 291

Query: 318 RDRIICF 324
           +D   CF
Sbjct: 292 KDSYACF 298


>gi|153954060|ref|YP_001394825.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           kluyveri DSM 555]
 gi|219854673|ref|YP_002471795.1| hypothetical protein CKR_1330 [Clostridium kluyveri NBRC 12016]
 gi|146346941|gb|EDK33477.1| RibF [Clostridium kluyveri DSM 555]
 gi|219568397|dbj|BAH06381.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 312

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 9/302 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSP 74
           +K   +A+G+FDG+HLGH  ++ + IK+A N  +   V +F  HP + I        L  
Sbjct: 13  MKSTYIALGSFDGLHLGHMSLVNKTIKLAKNNGAKSMVFTFKNHPLSTINPDLAPKILMD 72

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L   G   +    F  E      E F+  + +     K +I G  +RFG    
Sbjct: 73  TECKVNVLRNAGLDIINMANFNREFMKIHPEDFVIHL-LNNYRAKGIIVGFNYRFGYKNL 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TKGHVLNAAHLLGYRFTIE 193
           GD  +L+K  + Y F    ID ++  K Q+VSSS IRT +  +G +     LL   F I+
Sbjct: 132 GDVSLLKKMSKNYKFSLSIIDSVKY-KGQVVSSSIIRTLISDEGDMKKVNKLLTRPFAIQ 190

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             VIHG+ +GR LGFPT N+      ++ K GVY    +  D   + G+ N G NPT   
Sbjct: 191 GKVIHGKHLGRKLGFPTINLNYDKKFVIPKGGVYYTIVQ-LDNGIFKGITNVGYNPTTCD 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA-RKILES 311
           N  L +E+ I +F+++ YG+   V F + +R E+KF  + +L   + +D+  A +K L+ 
Sbjct: 250 N-KLSIETHILNFNEDAYGKNAKVHFIERIRDELKFNSLSELANQLKKDKLYASKKKLQI 308

Query: 312 SY 313
           ++
Sbjct: 309 NF 310


>gi|296185345|ref|ZP_06853755.1| riboflavin biosynthesis protein RibF [Clostridium carboxidivorans
           P7]
 gi|296050179|gb|EFG89603.1| riboflavin biosynthesis protein RibF [Clostridium carboxidivorans
           P7]
          Length = 312

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDGIH+GH  ++ + IK+A    +   + +F  HP ++I        +   S
Sbjct: 15  NTYIALGSFDGIHIGHVSLVNKTIKLARKNQAKSMIFTFKNHPLSVINKEIAPKIIMDNS 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE  G  A+    F  E    S E FI  + V     K ++ G   RFG    GD
Sbjct: 75  NKIEVLESFGLDAINMANFDKELMMLSPEDFILNL-VSHYRAKGIVVGFNNRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TKGHVLNAAHLLGYRFTIESD 195
             +L+K  +KY F    +D ++  K+Q+VSSS IR  +  +G +   + +L   F ++ +
Sbjct: 134 VELLKKLSKKYSFDLCVVDPVKY-KAQVVSSSVIRNVISDEGDMKKVSKMLTRPFMLQGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+++GRTLGFPT N+      +L + GVY    + +D   + G+ N G NPT+  N 
Sbjct: 193 VVKGKQLGRTLGFPTVNLNYDKRFVLPRGGVYYTVVKYED-KFFRGITNVGYNPTVEDN- 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DFS+ IY +   + F D +R E KF  ++ L   + +D+  A+K
Sbjct: 251 KLSVETHILDFSENIYNKHIKIYFMDRIRDEKKFDSVQFLAEQLKKDKIYAKK 303


>gi|302537268|ref|ZP_07289610.1| riboflavin biosynthesis protein RibF [Streptomyces sp. C]
 gi|302446163|gb|EFL17979.1| riboflavin biosynthesis protein RibF [Streptomyces sp. C]
          Length = 313

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 11/270 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M  +  +E    +P      VV IG++DG+H GH LI+ +A+  A     P  V++F+PH
Sbjct: 1   MQRWRGLE---DIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVAKARELGVPAVVVTFSPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  S    L+P   + +++  +G  AL+   FT E +  S   FI KVLV+ L  
Sbjct: 58  PSEVVRPGSHPPILAPYDRRAELMAGLGVDALLILPFTAEFSQLSPADFIVKVLVDKLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL---RNNKSQIVSSSNIRTALT 175
           + VI G  FRFG   AG+   L++ G  Y +    +D +           SS+  R  + 
Sbjct: 118 RAVIEGPNFRFGHRAAGNVDFLRELGSTYDYEVDVVDLVERGEAGGGVPFSSTLARKLVA 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
           +G +  AA +LG    +E  V+ G + GR LG+PTAN++  P   +  +GVYA    T D
Sbjct: 178 EGDMDGAAEILGRPHRVEGIVVRGAQRGRELGYPTANVETQPHTAIPADGVYAGWL-TAD 236

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
                   + G N          +E++  D
Sbjct: 237 GERMPAAISVGTNVQF-DATERTVEAYAID 265


>gi|34762574|ref|ZP_00143569.1| Riboflavin kinase; FMN adenylyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|237741678|ref|ZP_04572159.1| riboflavin kinase [Fusobacterium sp. 4_1_13]
 gi|256845002|ref|ZP_05550460.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_36A2]
 gi|294785711|ref|ZP_06750999.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_27]
 gi|27887740|gb|EAA24814.1| Riboflavin kinase; FMN adenylyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|229429326|gb|EEO39538.1| riboflavin kinase [Fusobacterium sp. 4_1_13]
 gi|256718561|gb|EEU32116.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_36A2]
 gi|294487425|gb|EFG34787.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_27]
          Length = 319

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 86/310 (27%), Positives = 142/310 (45%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++ + IK A        V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLINETIKAARENGKQAVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++        ++    +  +LE +G   ++  K       Y+  +F++ +L   L+V
Sbjct: 58  PMEVLFPERKFDYINTNEEKLYLLESLGVDVVVMQKVDKNFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +     ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKAEDLEYLAEIHNIKVTELPPV-TLDGELVSSSAIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--T 236
              A   L +   +  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+   
Sbjct: 176 FEGAVKFLDHPMLVIGEVIHGKKIARELGFPTTNIKMDNRLYPPFGIYGAFLQVGDKNSK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE  I DF++E+YG++  +    ++R E KF  I++LK 
Sbjct: 236 VLYGVVNVGYNPTLK--QEISLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|324990879|gb|EGC22814.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK353]
          Length = 310

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 LAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDEQIARSW 304


>gi|260889681|ref|ZP_05900944.1| riboflavin biosynthesis protein RibF [Leptotrichia hofstadii F0254]
 gi|260860287|gb|EEX74787.1| riboflavin biosynthesis protein RibF [Leptotrichia hofstadii F0254]
          Length = 333

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/306 (31%), Positives = 168/306 (54%), Gaps = 12/306 (3%)

Query: 6   NIEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTI 62
           +I+ +++L    +   +V +GNFDG+H+GH +IL +A+K     N    V +F    R  
Sbjct: 23  SIDYDKNLKEIKRNKNIVILGNFDGVHIGHQIILHKAVKQAKEKNLKTIVYTF----REY 78

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               +    ++  S +  +L + G   L   +F  +  NY+ E+F++KVLV+ L    V 
Sbjct: 79  --PKNQQTKITTCSEKAYLLNENGIDYLYLEQF-EKVRNYTPEEFVEKVLVDILNATEVY 135

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G  F FGK+++G+   L+K   +        + + +   +I+SS+ +R  + +G+    
Sbjct: 136 CGFNFTFGKEKSGNTDTLEKLLTEKNIKLNVQEPILDENGEIISSTRVRNYIKEGNFEKV 195

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGV 241
             LLG+ F I  +VI+G+++GR +GFPTAN++    I  + GVY ++   QD    Y+GV
Sbjct: 196 RELLGHNFIILGEVIYGKQLGRVIGFPTANLRFENKIYPEFGVYGVKICIQDDEKVYNGV 255

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            N GRNPT+   G L +E+ IFDF ++IYG+   +   + +R E KF+ +++LK  +G+D
Sbjct: 256 MNIGRNPTV-DVGVLSVETNIFDFDEDIYGKVIFIEILENIRHEKKFESVDELKEQIGKD 314

Query: 302 EKKARK 307
               + 
Sbjct: 315 VSYWKN 320


>gi|317133688|ref|YP_004093002.1| riboflavin biosynthesis protein RibF [Ethanoligenens harbinense
           YUAN-3]
 gi|315471667|gb|ADU28271.1| riboflavin biosynthesis protein RibF [Ethanoligenens harbinense
           YUAN-3]
          Length = 306

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 13/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++        LP+  +   V +G FDG+H+GH  ++  A +        +++F  HP 
Sbjct: 1   MEIYR----ADKLPDMREPVAVILGMFDGVHVGHAAVIRAAQET--GLRTALVTFTEHPA 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++++      L+    +E+I   M    LI   F     + SAE+FIQ VLV  +  K 
Sbjct: 55  QVLKNRRAPE-LTTARQRERIFAAMQVDFLIYLDF-KTIKSLSAEEFIQNVLVP-IRTKA 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
              G  + FG         L++ GE+YGF  V +  + +     VSS+ IR  +  G + 
Sbjct: 112 AFCGFNYTFGAGGKAGPAELERFGERYGFTAVRVPPVCDADG-PVSSTRIREQIVDGRME 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYS 239
           +AA LLG  FT+E  VIHG ++GR LG PT N ++    +  + GVYA            
Sbjct: 171 DAARLLGRPFTLEFPVIHGRQLGRKLGIPTINQRIPDGHVCPRYGVYAASALVDGCWR-D 229

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            VA+ G  PT+  +  +L E+FIFD+  ++Y +   V+   +LRPE +F  +E+LK  M 
Sbjct: 230 AVASVGVKPTVGSDD-VLCETFIFDYDGDLYDRWIEVALHTFLRPEERFAGVEELKTQME 288

Query: 300 EDEKKARKILE 310
            D + A+  L 
Sbjct: 289 RDIRHAKAWLA 299


>gi|149917191|ref|ZP_01905691.1| riboflavin biosynthesis protein RibF [Plesiocystis pacifica SIR-1]
 gi|149822107|gb|EDM81500.1| riboflavin biosynthesis protein RibF [Plesiocystis pacifica SIR-1]
          Length = 358

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 15/289 (5%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             V +G FDG+H GH  ++ +A  +A    + V++F P P  ++        L  P+ + 
Sbjct: 28  TAVCLGTFDGMHRGHQGLIARARSLA--GRVAVVTFEPRPADVLAPGKAAPRLQTPAQRV 85

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++  ++G   L+  +F    +  S + F+Q  L++ L    VI G  FRFG  RAG    
Sbjct: 86  RVCRELGVDELVMLRFDPSVSTMSPQAFVQAFLLDGLAPAAVIVGYDFRFGARRAGGPEE 145

Query: 140 LQKRGEKYGFHTVFIDELR---NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
           L+   E  G     ++++        + + S+ IR  +++G V  AA +LG  + +E +V
Sbjct: 146 LRALLEPAGVRVSVVEKIEGRGELAGEKLGSTAIRRYVSEGQVERAARVLGRLYAVEGEV 205

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR----TQDQTSYSGVANFGRNPTMVP 252
           +HG+  GR LGFPTAN+  +  +L   GVYA             S++ VAN G NPT   
Sbjct: 206 VHGDARGRGLGFPTANVAAAS-LLPSSGVYACFLTDLSDGDAGDSWAAVANLGTNPTFTG 264

Query: 253 ---NGPLLLESFIFDFS--QEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              + PL LE    D      +YG+R  V+F DY+R E +F   + L+ 
Sbjct: 265 AREDAPLRLEVHALDVDLGARLYGRRVEVAFVDYIRGEQRFDGPQALRE 313


>gi|329942814|ref|ZP_08291593.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci Cal10]
 gi|332287406|ref|YP_004422307.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|313847986|emb|CBY16983.1| riboflavin biosynthesis protein [Chlamydophila psittaci RD1]
 gi|325506709|gb|ADZ18347.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|328815074|gb|EGF85063.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci Cal10]
 gi|328914655|gb|AEB55488.1| riboflavin biosynthesis protein RibF [Chlamydophila psittaci 6BC]
          Length = 304

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++    S+P  +    + IG FDG HLGH  +L             V++F+ HP 
Sbjct: 1   MEIFYSL---TSIPRSVDS--ITIGFFDGCHLGHKKLLTVLSSYP--GLSGVITFDLHPH 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++QS +P   ++    +  +L+      L    FT E AN SAE FI+ +  + L  + 
Sbjct: 54  AVLQSPTP-KLITSTKERLLLLQDFPIDYLCILSFTQEFANQSAESFIRSL-HQTLRCRR 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   R GK R G+   LQ      G   + +   + ++ +IVSS  IR  L +G + 
Sbjct: 112 LILGYDSRLGKGREGNAKTLQPLANSLGIEIIEVAPHKIDQ-EIVSSKRIRQFLMEGDLD 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NA   LG+ +     +  G  +G  LG  T N+      LL  GVYA        T Y G
Sbjct: 171 NANRHLGHSYKYVGKIEAGYGLGTQLGVATINL-PQDQCLLPLGVYACEIEYH-TTIYQG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + N G+ PT+  N  L LE+ +F FS  +YG+  +V    ++R E KF   E L   + +
Sbjct: 229 IMNLGKAPTVGRNS-LCLEAHLFGFSGNLYGETVSVIPKKFIRKERKFSSREMLSQAIQK 287

Query: 301 DEKKARKILESSYP 314
           D + A+    ++Y 
Sbjct: 288 DIESAKAFFSTNYA 301


>gi|317057650|ref|YP_004106117.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 7]
 gi|315449919|gb|ADU23483.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 7]
          Length = 308

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 102/294 (34%), Positives = 149/294 (50%), Gaps = 6/294 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG V A+G FDG+H GH L++  A+ +A        V +F     T       I  +   
Sbjct: 12  KGTVCALGLFDGVHRGHRLVINNALSLAEKLGVRSAVFTFRTDTVTSKGHDGRIEMILSD 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +  E MG   L    F  E  N SAE F++ +L   L  + V+ G+ FRFGK   G
Sbjct: 72  AEKCRHFEDMGVDLLYSPDFN-ELKNMSAEAFVRDILSGLLGCRAVVCGSDFRFGKGAEG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L+  G  YG   +  D+L   K + VSS+ IR  +  G +  A  LLGY F ++  
Sbjct: 131 DCNTLELYGRIYGIDVMVCDKLSY-KGEEVSSTVIRECIRTGQIEKANELLGYIFGLKLV 189

Query: 196 VIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V HG ++GRT  FPT N  +    IL K GVYA R     ++ + GV N G  PT+  + 
Sbjct: 190 VEHGRQLGRTWNFPTINQTIPRGQILPKFGVYATRVMIDGKSRF-GVTNIGVKPTLKAHD 248

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             L E++I DFS ++YG+   +    ++RPE  F  I++LK  +G+D  K R+ 
Sbjct: 249 APLAETYILDFSGDLYGREIEILLDKFIRPEKGFDSIDELKAQIGKDTLKVREF 302


>gi|254556862|ref|YP_003063279.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
 gi|254045789|gb|ACT62582.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
          Length = 333

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M V  N++   +L    +G  V+A+G FDG+H GH  ++  A + A        V++F+ 
Sbjct: 1   MQVI-NLKYPVALSQIPEGPIVLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQ 59

Query: 58  HPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           HP  + + + P  +  L+    +  ++ ++G   L    F         + F+ +++V  
Sbjct: 60  HPSVVFKHTDPQQVRYLTTIDQKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIV-G 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  +TV+ G  + +G     +   L   G    F  + + +     ++ +SS+ IR AL 
Sbjct: 119 LHAQTVVAGFDYTYGPAEIANMQRLNDYGHNR-FEIIEVPK-AELDAEKISSTRIRRALD 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
            G +  A  LLGY++    +V+HGE  GRTLGFPTAN+   P+  +   G+YA   +   
Sbjct: 177 AGDIDTANRLLGYQYETAGEVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYATMVQI-G 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                G+A+ GRN T   + P+ +E ++ DF  ++YG   TV +   +R EIKF   + L
Sbjct: 236 TRWVMGMASVGRNVTFGDHRPITVEIYLLDFRGDLYGHNLTVRWGHRMRGEIKFAGADAL 295

Query: 295 KIYMGEDEKKARKI 308
              +  DE+  R  
Sbjct: 296 VAQLKRDEQNTRDY 309


>gi|28378664|ref|NP_785556.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|28271500|emb|CAD64405.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
          Length = 333

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M V  N++   +L    +G  V+A+G FDG+H GH  ++  A + A        V++F+ 
Sbjct: 1   MQVI-NLKYPVALSQIPEGPIVLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQ 59

Query: 58  HPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           HP  + + + P  +  L+    +  ++ ++G   L    F         + F+ +++V  
Sbjct: 60  HPSVVFKHTDPQQVRYLTTIDQKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIV-G 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  +TV+ G  + +G     +   L   G    F  + + +     ++ +SS+ IR AL 
Sbjct: 119 LHAQTVVAGFDYTYGPAEIANMQRLNDYGHNR-FEIIEVPK-AELDAEKISSTRIRRALD 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
            G +  A  LLGY++    +V+HGE  GRTLGFPTAN+   P+  +   G+YA   +   
Sbjct: 177 AGDIDTANRLLGYQYETAGEVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYATMVQI-G 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                G+A+ GRN T   + P+ +E ++ DF  ++YG   TV +   +R EIKF   + L
Sbjct: 236 TRWVMGMASVGRNVTFGDHRPITVEIYLLDFRGDLYGHNLTVRWGHRMRGEIKFAGADAL 295

Query: 295 KIYMGEDEKKARKI 308
              +  DE+  R  
Sbjct: 296 VAQLKRDEQNTRDY 309


>gi|148380369|ref|YP_001254910.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932766|ref|YP_001384589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936853|ref|YP_001388105.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A str. Hall]
 gi|170759316|ref|YP_001787725.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Clostridium
           botulinum A3 str. Loch Maree]
 gi|148289853|emb|CAL83961.1| putative riboflavin biosynthesis protein RibC [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928810|gb|ABS34310.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932767|gb|ABS38266.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A str.
           Hall]
 gi|169406305|gb|ACA54716.1| riboflavin biosynthesis protein RibF [Clostridium botulinum A3 str.
           Loch Maree]
 gi|322806680|emb|CBZ04249.1| riboflavin kinase [Clostridium botulinum H04402 065]
          Length = 306

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 8/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDG+H GH  ++++  K    N     VL+F  HP   I        L    
Sbjct: 15  KTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKDHPLNTINKDLAPKILLDNP 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + KIL++     +    F  E      E FI+K+ + +      + G  +RFG    GD
Sbjct: 75  SKVKILKENEVDLVNFINFDKEYMKLCPEDFIKKM-IYYYNAGGFVVGFNYRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-ALTKGHVLNAAHLLGYRFTIESD 195
             +L K  +K+ F+   +  ++    +I+SSS IR   +  G+V  A  +LG  + ++ +
Sbjct: 134 IELLDKMSKKFNFNLKVVSPVKYLN-EIISSSKIRHILIEDGNVDKAKKMLGRNYFLKGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           ++ G+++GR LG+PT N+  +   +L + GVY      ++   Y G+ N G NPT+  + 
Sbjct: 193 IVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYEN-KLYKGITNVGYNPTV-EDK 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L +E+ I DF ++IYG+   + F   +R E KF  +E+LK  + +D+  A++
Sbjct: 251 KLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKNQLKKDKSFAKR 303


>gi|166154314|ref|YP_001654432.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 434/Bu]
 gi|166155189|ref|YP_001653444.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335565|ref|ZP_07223809.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis L2tet1]
 gi|165930302|emb|CAP03788.1| riboflavin kinase [Chlamydia trachomatis 434/Bu]
 gi|165931177|emb|CAP06742.1| riboflavin kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 301

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K        V++F+ HP 
Sbjct: 4   MDLFYSL-----LPSSNPIESVTIGFFDGCHLGHQALLSFLTKFP--GKSGVITFSQHPE 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E AN  AE FIQ +  + L    
Sbjct: 57  HTL-SNSPPETITSLEERIQLLAGCGIDYLAVLPFNQEIANQEAELFIQSIY-KTLHPSR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+  +  IVSS  IR  L +  + 
Sbjct: 115 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLC 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F     V HG  IG + G+ T N+ L+  +L   GVY      +   SY+G
Sbjct: 174 SAEKFLGRPFAYTGKVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAG 231

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 232 VMNLGMAPTMQRH-QLCLEAHILDFSEDLYDKSITVILEQFLREEKLFSSKDELVLAIQE 290

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 291 DIRQAR 296


>gi|223933474|ref|ZP_03625458.1| riboflavin biosynthesis protein RibF [Streptococcus suis 89/1591]
 gi|330832927|ref|YP_004401752.1| riboflavin biosynthesis protein RibF [Streptococcus suis ST3]
 gi|223897847|gb|EEF64224.1| riboflavin biosynthesis protein RibF [Streptococcus suis 89/1591]
 gi|329307150|gb|AEB81566.1| riboflavin biosynthesis protein RibF [Streptococcus suis ST3]
          Length = 307

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M++   I+    L N  +  V+ +G FDGIHLGH  +L++A ++A+   +  TVL+F   
Sbjct: 1   MNI-RTIKHYSEL-NQEEPTVLVLGYFDGIHLGHKALLDRARQVADEKGLSVTVLTFPET 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP  +  L+    +  +LE+ G   L+   FT E A+ + +QF+++  ++ L
Sbjct: 59  PRLAFSRFSPELLLHLTSQDQRYHLLEQYGVDQLVLTDFTSEFASNTPQQFLERY-IKGL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  + FG  RA D   L +    +      + E+ +   + VSS+ IR A+  
Sbjct: 118 NAQVLVAGFDYHFGNCRA-DVTDLTEL---FDGQVEIVSEV-SLGGEKVSSTRIRQAIQS 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G V  A  LLGY F  E  V+HG+  GRT+G+PTAN+     + L  EGVY       D 
Sbjct: 173 GEVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLPSEGVYVADVEV-DG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      + +E+ IF F + IYG++ T+ + + +R  +KF  IE L 
Sbjct: 232 KRYRAMTSVGKNVTF-DGTEMRIEAHIFGFHRFIYGEKITIFWLEKIRDMVKFDGIEGLM 290

Query: 296 IYMGEDEKKARKI 308
             M  DEK A + 
Sbjct: 291 EQMKSDEKFALQW 303


>gi|313885293|ref|ZP_07819044.1| riboflavin biosynthesis protein RibF [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619399|gb|EFR30837.1| riboflavin biosynthesis protein RibF [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 329

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 10/328 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M V              +  V+A+G FDG+HLGH  +++  QA   A + P+ V++F+  
Sbjct: 1   MQVIEITHPYHPTDIVDQDIVLALGFFDGVHLGHQHVIKVAQAYAQAQDLPLAVMTFDQQ 60

Query: 59  PRTIIQ--SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       +S +  +S    + ++  ++G   L    ++ E  + S + F+   +V  L
Sbjct: 61  PKIFYSELKASEVEYVSSNQRRTELFAELGVDYLYMVHYSHEFGSQSPQAFVDDYMV-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + +G     +   L     K  F  V + EL+  ++  V S  I   L +
Sbjct: 120 HAKIVVAGFDYTYGPSHLANMQTLP-MHAKGRFKVVEVPELQV-QTHKVGSRFILDYLKE 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +  A   LGY +     VIHGEK GRT+GFPTAN+Q     ++ K GVY +  + ++ 
Sbjct: 178 GQLDQANLELGYIYQTHGKVIHGEKRGRTIGFPTANIQHFGQQVIPKIGVYVVAIKVEN- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  +A+ G N T   +  L +E +I DF+Q+IYGQ   + ++ YLR EIKF   + L 
Sbjct: 237 IWHRAMASIGYNVTFPGDRGLSIEVYILDFAQDIYGQEVDIRWYHYLRGEIKFDSAQGLI 296

Query: 296 IYMGEDEKKARKILESSYPLSERDRIIC 323
             + +D +      ++ +P  +R+  + 
Sbjct: 297 DQLNQDREDTILYFQA-HPDYQREDSLA 323


>gi|260494126|ref|ZP_05814257.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_33]
 gi|260198272|gb|EEW95788.1| riboflavin biosynthesis protein RibF [Fusobacterium sp. 3_1_33]
          Length = 319

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++ + ++ A        V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLINETVRAARENGKQAVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        ++    +  +LE +G   ++  K       Y+  +F++ +L   L+V
Sbjct: 58  PMEILFPEKKFDYINTNEEKLYLLESLGVDVVVMQKVDKNFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +     ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKAEDLEYLAEIHNIKVTELPPV-TLDGELVSSSAIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--T 236
              A  LL +   I  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+   
Sbjct: 176 FDGAVKLLDHPMIIIGEVIHGKKIARELGFPTTNIKMDNRLYPPSGIYGAFLQVGDKNSK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE  I DF++E+YG++  +    ++R E KF  I++LK 
Sbjct: 236 VLYGVVNVGCNPTLK--HEMSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|328946089|gb|EGG40235.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1087]
          Length = 310

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDF Q+IYG    + + D +R  +KF+ I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFYQDIYGDTIRIFWLDKIREMVKFEGIDSLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|324993135|gb|EGC25055.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK405]
          Length = 310

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREISTEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRIAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +T 
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETITV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDSIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|225164873|ref|ZP_03727094.1| riboflavin biosynthesis protein RibF [Opitutaceae bacterium TAV2]
 gi|224800522|gb|EEG18897.1| riboflavin biosynthesis protein RibF [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 31/342 (9%)

Query: 1   MHVFHNIEINQSLP-----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           MH F +I    +         ++   +AIG FDG+HLGH  ++E A+  A  S     VL
Sbjct: 1   MHTFTSIAEAAAALAAPAAQSVRPLHLAIGMFDGVHLGHQAVIEAAVHSARRSGGTAAVL 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +F PHP  + +  +P+  +  P+++ ++L ++G   +I   F    A   A +F+  +  
Sbjct: 61  TFWPHPSRLFRPDAPVRMIMTPALKARLLAQLGVDVIISQTFDAAYAQTPASEFLPLLKR 120

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               ++T+  G  +RFG+ R GD   L       G      + + N+  + +SS+ IR  
Sbjct: 121 HLPALRTIYVGENWRFGRGREGDISYLINEARPLGLSVFSAERI-NHNGEPISSTRIRAH 179

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-- 231
           L  G +  A  LLGY +  E  ++ G+++GRT+GFPT N+   PD+L + GVYA+R    
Sbjct: 180 LETGGIEEANTLLGYSYFAEGVIMPGKQLGRTIGFPTLNVDWQPDLLPRLGVYAVRVTAG 239

Query: 232 --------------------TQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIY 270
                                    S+  VAN+G  PT+       LE  +  D      
Sbjct: 240 TSPGLTSAPPPSPPPPPAAAAPAAPSFPAVANYGLRPTVENATRPRLEIHLLGDRCPFDA 299

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           G   TV +  +LRPE +F ++  L+  +  D + A     + 
Sbjct: 300 GDFVTVEWLTFLRPEQRFPNLPALRAQLAADRQSALDWFSAQ 341


>gi|225024894|ref|ZP_03714086.1| hypothetical protein EIKCOROL_01782 [Eikenella corrodens ATCC
           23834]
 gi|224942298|gb|EEG23507.1| hypothetical protein EIKCOROL_01782 [Eikenella corrodens ATCC
           23834]
          Length = 312

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 105/291 (36%), Positives = 149/291 (51%), Gaps = 11/291 (3%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTII---Q 64
           N     H  G  V IGNFDG+HLGH  ILE+    A+   +    + F P P+      +
Sbjct: 7   NTVFRPHPHGSAVTIGNFDGVHLGHRHILERLRHEADERGLAAVAIVFEPQPQEFFSRQR 66

Query: 65  SSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           S    F LSP   + ++L   G   A+   +F    A  SA  FIQ +L+E L  + ++ 
Sbjct: 67  SVEKPFRLSPLREKLRLLRDTGCLDAVWVLRFNAGLAAVSAADFIQHLLIEQLHTRHLLI 126

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G  FRFG  R GD  +L +  E   F T     +   +    SS+ +R AL++G +  A 
Sbjct: 127 GDDFRFGAGRQGDFSLLSRCPE---FTTERTPSVMV-QDVRASSTLVRQALSEGRLGYAE 182

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
            LLG+ +++   V HG K+GRT+G PTAN+ L P      GV+ I       T Y GVA+
Sbjct: 183 SLLGHPYSLSGRVKHGAKLGRTIGCPTANLHLPPHRYPLCGVFVIAAHGTFGTRY-GVAS 241

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           FGRNPT+       LE+ +FDF+ ++YGQR  + F   LR E KF  + +L
Sbjct: 242 FGRNPTVSSLPTQKLEAHLFDFADQLYGQRLCIDFLHKLRDEAKFPGLPEL 292


>gi|332670051|ref|YP_004453059.1| riboflavin biosynthesis protein RibF [Cellulomonas fimi ATCC 484]
 gi|332339089|gb|AEE45672.1| riboflavin biosynthesis protein RibF [Cellulomonas fimi ATCC 484]
          Length = 346

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 32/333 (9%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSP 68
             +P+     VV IGNFDG+H GH  +L +    A  +    +  +F PHP  + +    
Sbjct: 12  ADVPSGFGPSVVTIGNFDGVHRGHASVLTRMCADARAAGARAVAVTFTPHPLQVHRPDEA 71

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+    + ++LE+ G  A++   +TLE A  + ++F+++ LV+ L  +TV+ G   R
Sbjct: 72  PELLTGDEDRLELLEQTGLDAVLLLPYTLEFARQTPQEFVERYLVDGLRARTVVVGRDVR 131

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELR---------------NNKSQIVSSSNIRTA 173
           FG   +GD   +   GE+YGF    ID++                +   +  SS+  R  
Sbjct: 132 FGWQNSGDLSTMVALGERYGFEVEVIDDVTPAAAADPGSAEDRAADPLRRRWSSTWAREL 191

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFR- 231
           L  G V+ AA +LG    +   V+HG+  GR LG+PTAN+      ++  +GVYA   R 
Sbjct: 192 LAAGDVVQAARVLGRPHRVRGTVVHGDARGRELGYPTANLGGDLAGMVPADGVYAGWLRR 251

Query: 232 -----------TQDQTSYSGVANFGRNPTMVPNGPLLLESFI-FDFSQEIYGQRCTVSFF 279
                       +         + G NPT        +E+++      ++Y Q+  V   
Sbjct: 252 TRHADGSPVDPHEGDVVLPAAVSIGTNPTFDGV-ERRVEAYVLDRDDLDLYDQQVVVELV 310

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           + LRP ++F  +E L   MGED ++ R +L  +
Sbjct: 311 ERLRPTLRFDSVEALLERMGEDVERVRVVLAGT 343


>gi|29840224|ref|NP_829330.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila caviae GPIC]
 gi|29834572|gb|AAP05208.1| riboflavin biosynthesis protein RibF [Chlamydophila caviae GPIC]
          Length = 304

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + +++    ++P+ +    + IG FDG HLGH  +L      +      +++F+ HPR
Sbjct: 1   MEILYSL---ATVPSSVDS--ITIGFFDGCHLGHKQLLTVLSSYS--GTSGIITFDLHPR 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           +I+Q S P   ++    +  +L+      L    F+   A+ SAE FI  +  + L+ K 
Sbjct: 54  SILQPSLP-KLITSTRERFLLLQDFQIDYLYILPFSKSFADQSAESFILSL-HQILKCKR 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   + GKD  GD   L+   +  G   + +   + +  +IVSS  IR  L +G + 
Sbjct: 112 LILGYDSKLGKDGQGDAVTLKPLADSLGIEIIEVPPYKIDN-EIVSSKRIRQFLIQGDLD 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG+ +     +  G  +G  LG  T N+      LL  GVYA      +  +Y G
Sbjct: 171 SANRHLGHSYKYVGKIETGYGLGIQLGVATINL-PQEQCLLPYGVYACEIE-HNSITYQG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + N G  PT+  N  L LE+ +FDFS  +YG+  +V    +LR E KF   E L   + +
Sbjct: 229 IMNLGEAPTVGRNS-LCLEAHLFDFSGNLYGETVSVIPRKFLREEKKFPSREDLSKAIRK 287

Query: 301 DEKKARKILESSYP 314
           D  +A+    ++Y 
Sbjct: 288 DIAEAKAFFTTNYA 301


>gi|327469560|gb|EGF15029.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK330]
          Length = 310

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + +   +R  +KF+ I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLHKIREMVKFEGIDSLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|324995562|gb|EGC27474.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK678]
 gi|325687886|gb|EGD29906.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK72]
          Length = 310

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR     +       +    + I    N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKESHEL-----RDFFNGKIVIVPSVNLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVRLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|327461403|gb|EGF07734.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis SK1]
 gi|327474038|gb|EGF19451.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK408]
 gi|327489261|gb|EGF21054.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1058]
          Length = 310

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRIAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +T 
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETITV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     +LL  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVLLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDSIRIFWLDKIREMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|300768175|ref|ZP_07078080.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180803|ref|YP_003924931.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|300494239|gb|EFK29402.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046294|gb|ADN98837.1| FAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 333

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 87/314 (27%), Positives = 151/314 (48%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP 57
           M V  N++   +L    +G  V+A+G FDG+H GH  ++  A + A        V++F+ 
Sbjct: 1   MQVI-NLKYPVALSQIPEGPIVLALGFFDGVHRGHQQVVATARQAAQAQHAKLAVMTFDQ 59

Query: 58  HPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           HP  + + + P  +  L+    +  ++ ++G   L    F         + F+ +++V  
Sbjct: 60  HPSVVFKHTDPQQVRYLTTIDQKTALMSELGVDILYVLHFDATVGAMPPQTFVDQLIV-G 118

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  +TV+ G  + +G     +   L   G    F  + + +     ++ +SS+ IR AL 
Sbjct: 119 LHAQTVVAGFDYTYGPAEIANMQRLNDYGHNR-FEIIEVPK-AELDAEKISSTRIRRALD 176

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD 234
            G +  A  LLGY++    +V+HGE  GRTLGFPTAN+   P+  +   G+YA   +   
Sbjct: 177 AGDIDTANRLLGYQYETAGEVVHGEARGRTLGFPTANVAHGPNTRVPGIGIYATMVQI-G 235

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                G+A+ GRN T   + P+ +E ++  F  ++YG   TV +   +R EIKF   + L
Sbjct: 236 TRWVMGMASVGRNVTFGDHRPITVEIYLLGFQGDLYGHNLTVRWGHRMRGEIKFAGADAL 295

Query: 295 KIYMGEDEKKARKI 308
              +  DE+  R  
Sbjct: 296 VAQLKRDEQNTRDY 309


>gi|320449779|ref|YP_004201875.1| riboflavin biosynthesis protein RibF [Thermus scotoductus SA-01]
 gi|320149948|gb|ADW21326.1| riboflavin biosynthesis protein RibF [Thermus scotoductus SA-01]
          Length = 294

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/291 (32%), Positives = 141/291 (48%), Gaps = 15/291 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VVA+G+FDG+HLGH  +L QA+  A   + P+ V +F+P  +   +       L   + +
Sbjct: 15  VVAVGSFDGVHLGHQHLLHQALAEAKSLHQPLLVYTFDPPTKVFTRGEG---FLMDLTEK 71

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L  +G   ++   F    A   A +F++ +    L    +  G  FRFGK R G   
Sbjct: 72  VEALRALGVELILAVAFNETFAQREAGEFLEDL--RRLGASRIYVGEDFRFGKGRGGGPE 129

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +         V I  L     + V SS IR  L +G V  A HLLG  +     V+ 
Sbjct: 130 DLAQ------VAPVRIVPLLTLGGEPVKSSRIRALLQEGRVEEARHLLGRPYGAYGVVVE 183

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G+K+GR LGFPTAN+ + P  +L  GV+A+  +      Y GVAN G  PT+       L
Sbjct: 184 GDKLGRKLGFPTANLAVHPQKILPPGVFAVEAQG-SFGRYKGVANVGTRPTVN-GMERRL 241

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  +  F+ E+YG+   +SF   LR E +F  +E+LK  + +D   AR   
Sbjct: 242 EVHLLGFAGELYGEEMRLSFLKRLREEKRFDSLEELKAQIAKDVASARAYF 292


>gi|154506283|ref|ZP_02043021.1| hypothetical protein RUMGNA_03825 [Ruminococcus gnavus ATCC 29149]
 gi|153793422|gb|EDN75842.1| hypothetical protein RUMGNA_03825 [Ruminococcus gnavus ATCC 29149]
          Length = 301

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 16/298 (5%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              V +G FDG+H GH  ++ +  + A+       V +F+               L    
Sbjct: 17  RTAVTLGKFDGLHRGHQELISRIQRFADQEKAESVVFAFDM----------GKEALMTGE 66

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++  LE      LI   FT       AE+FI+K+L+E L    +  GT F FG  + GD
Sbjct: 67  EKKAYLEGC-VDTLIICPFTEAIREMEAEEFIEKILIEQLHAAYIAVGTDFHFGHQKRGD 125

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L++  ++YG+    +++    + + +SS+ IR AL  G+V  A  LLGYR+  E  V
Sbjct: 126 ICMLKQYAKRYGYELEIVEKAVY-RKREISSTYIREALKVGNVELAEKLLGYRYRTEGVV 184

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG+K+GRTLGFPT N+   P+    + GVYA R +  D T Y G+ N G  PT+     
Sbjct: 185 EHGQKLGRTLGFPTLNVAWKPEKAAPRFGVYACRVKM-DGTWYCGIGNLGIKPTVTDAKR 243

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           +L E ++FD+  + YG+   + F  + RPE +F  +E+LK  +  D     +   +  
Sbjct: 244 ILTEVYVFDYKGDAYGKYVEIEFCAFERPESRFASLEELKTQVDRDILFGMEYFRAQQ 301


>gi|332361488|gb|EGJ39292.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1056]
          Length = 310

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 96/313 (30%), Positives = 147/313 (46%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAV 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF  I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIRDMVKFDGIDSLI 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|125717775|ref|YP_001034908.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus sanguinis SK36]
 gi|125497692|gb|ABN44358.1| FAD synthase, putative [Streptococcus sanguinis SK36]
          Length = 310

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I       I V++F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIAAEQGLKIAVMTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEERMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDFFNGKIVIVPSV-NLDNRKISSTRIRETIAA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  IFDFSQ+IYG    + + D +R  +KF+ I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNIFDFSQDIYGDTIRIFWLDKIREMVKFEGIDSLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|15604812|ref|NP_219596.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis D/UW-3/CX]
 gi|76788806|ref|YP_327892.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis A/HAR-13]
 gi|237802525|ref|YP_002887719.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237804442|ref|YP_002888596.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255310895|ref|ZP_05353465.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 6276]
 gi|255317195|ref|ZP_05358441.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 6276s]
 gi|255506668|ref|ZP_05382307.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis D(s)2923]
 gi|3328489|gb|AAC67684.1| Riboflavin kinase/FAD Synthase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167336|gb|AAX50344.1| riboflavin kinase [Chlamydia trachomatis A/HAR-13]
 gi|231272742|emb|CAX09646.1| riboflavin kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273759|emb|CAX10540.1| riboflavin kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|289525137|emb|CBJ14609.1| riboflavin kinase [Chlamydia trachomatis Sweden2]
 gi|296434681|gb|ADH16859.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis E/150]
 gi|296435610|gb|ADH17784.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/9768]
 gi|296436533|gb|ADH18703.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/11222]
 gi|296437470|gb|ADH19631.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/11074]
 gi|296438398|gb|ADH20551.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis E/11023]
 gi|297139969|gb|ADH96727.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis G/9301]
          Length = 301

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K    S   V++F+ HP 
Sbjct: 4   MDLFYSL-----LPSSNPVESVTIGFFDGCHLGHQALLSFLTKFP--SKSGVITFSQHPE 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E AN  AE FIQ +  + L    
Sbjct: 57  HTL-SNSPPETITSLEERVQLLAGCGIDYLAVLPFNQEIANQEAEPFIQSIY-KTLRPSR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+  +  IVSS  IR  L K  + 
Sbjct: 115 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLC 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V HG  IG + G+ T N+ L+  +L   GVY      +   SY+G
Sbjct: 174 SAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAG 231

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 232 VMNLGMAPTMQRH-QLCLEAHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQE 290

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 291 DIRQAR 296


>gi|331266252|ref|YP_004325882.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus oralis Uo5]
 gi|326682924|emb|CBZ00541.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus oralis Uo5]
          Length = 308

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVKEVNHLLGTPLPTR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  IE+L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSIEELVDQLQKDEEIARNW 304


>gi|237744290|ref|ZP_04574771.1| riboflavin kinase [Fusobacterium sp. 7_1]
 gi|229431519|gb|EEO41731.1| riboflavin kinase [Fusobacterium sp. 7_1]
          Length = 319

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V ++I              VAIGNFDG+H GH  ++ + ++ A  +     V +F  H
Sbjct: 1   MIVVNDILTTDI---DFNDTYVAIGNFDGVHYGHKKLINETVRAARENGKRAVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+        ++    +  +LE +G   ++  K       Y+  +F++ +L   L+V
Sbjct: 58  PMEILFPEKKFDYINTNEEKLYLLESLGVDVVVMQKVDKNFLEYTPLEFVR-ILKNKLKV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FGK   G    L+   E +      +  +     ++VSSS IR  +    
Sbjct: 117 KEIFIGFNFSFGKGGVGKAEDLEYLAEIHNIKVTELPPV-TLDGELVSSSAIRKKIANSD 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--T 236
              A  LL +   I  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+   
Sbjct: 176 FDGAVKLLDHPMIIIGEVIHGKKIARELGFPTTNIKMDNRLYPPYGIYGAFLQVGDKNSK 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              GV N G NPT+     + LE  I DF++E+YG++  +    ++R E KF  I++LK 
Sbjct: 236 VLYGVVNVGCNPTLK--HEMSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKA 293

Query: 297 YMGEDEKKAR 306
            +  D  + +
Sbjct: 294 TIQADVDRWK 303


>gi|218282373|ref|ZP_03488655.1| hypothetical protein EUBIFOR_01237 [Eubacterium biforme DSM 3989]
 gi|218216659|gb|EEC90197.1| hypothetical protein EUBIFOR_01237 [Eubacterium biforme DSM 3989]
          Length = 330

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 14/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V        ++P  L      IG FDG+H GH  +L+  I  A        +++F+P 
Sbjct: 3   MEVIRI--DYLNVPKDLLKSSCCIGFFDGLHTGHQALLDNCILKAKELGVQSGLITFDPD 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I         ++    +  +   MG   +    F+ + A    + F   +L++ + V
Sbjct: 61  PWKIFFPDRVCRHITTLEDRIHLASAMGIEVMYVITFSKDFAALDVDAF--HLLLQKMNV 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  F++    +G+   LQ    +  F+   ID + N+K++ +SSS I   +  G 
Sbjct: 119 CHITCGFDFKYASKNSGNVHTLQ---NQDYFNVSVIDSV-NSKNEKISSSRIEPLIQSGK 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLG-FPTANM-QLSPDILLKEGVYAIRFRTQDQT 236
           +  A  LLGY ++IE  + HG K G TL  FPTAN+   +  ++   GVYA      D T
Sbjct: 175 IDLANELLGYMYSIEGIIEHGFKRGSTLLKFPTANLGANADYLVPSSGVYAGFVCVND-T 233

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y  + N G NPT   N  + +E+ IFDF Q+IY QR    F    R EI+F   E+LK 
Sbjct: 234 FYGAMINVGNNPTF-ENKKVSIEAHIFDFDQDIYDQRVRFFFLKKTRNEIRFNGFEELKK 292

Query: 297 YMGEDEKKARKILE 310
            +  D    +K++ 
Sbjct: 293 QLESDIITCKKVIS 306


>gi|293365561|ref|ZP_06612270.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|307703516|ref|ZP_07640458.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|291315929|gb|EFE56373.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
 gi|307622923|gb|EFO01918.1| riboflavin biosynthesis protein RibF [Streptococcus oralis ATCC
           35037]
          Length = 316

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVKEVNHLLGTPLPSR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIARNW 304


>gi|315613274|ref|ZP_07888183.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis ATCC
           49296]
 gi|315314509|gb|EFU62552.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis ATCC
           49296]
          Length = 316

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V     LLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVREVNQLLGTPLPTR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIARNW 304


>gi|312866176|ref|ZP_07726397.1| riboflavin biosynthesis protein RibF [Streptococcus downei F0415]
 gi|311098580|gb|EFQ56803.1| riboflavin biosynthesis protein RibF [Streptococcus downei F0415]
          Length = 305

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   IE  Q++    +  V+ +G FD +H GH ++ ++A +IA      I VL+F   
Sbjct: 1   MKIIE-IENYQAI-EQEEETVLVLGYFDALHQGHKVLFDRAKEIAKEKHLKIAVLTFFES 58

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+ +     P  +  ++ P  +     + G   L    FT   +  S++ FI+   +  L
Sbjct: 59  PKLVFSRFEPDLLKHITYPEKRYAKFAEYGVDYLYLTNFTSAFSKVSSDDFIKNY-IGGL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +    + + ++  +  Q +SS+ IR  + +
Sbjct: 118 KAKALVVGFDYKFGHNRT-DADYL---VRNFPGQVLTVPQVSQD-GQKISSTRIRGLIAQ 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G++     LLGY F+    V+HG+  GRT+GFPTAN+  L    L  +GVY      +  
Sbjct: 173 GNIAQVNQLLGYEFSTRGIVVHGDARGRTIGFPTANLAPLDATFLPADGVYVTDVLLKG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ +FDFS +IYG++  + + D +R  +KF  I++L 
Sbjct: 232 RRYRAMTSIGKNVTF-GGTELRLEANLFDFSGDIYGEQLELIWLDKIREMVKFNGIDELV 290

Query: 296 IYMGEDEKKARKI 308
             + +D+K A++ 
Sbjct: 291 DQLHKDQKIAQEW 303


>gi|297748222|gb|ADI50768.1| Riboflavin kinase [Chlamydia trachomatis D-EC]
 gi|297749102|gb|ADI51780.1| Riboflavin kinase [Chlamydia trachomatis D-LC]
          Length = 307

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K    S   V++F+ HP 
Sbjct: 10  MDLFYSL-----LPSSNPVESVTIGFFDGCHLGHQALLSFLTKFP--SKSGVITFSQHPE 62

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E AN  AE FIQ +  + L    
Sbjct: 63  HTL-SNSPPETITSLEERVQLLAGCGIDYLAVLPFNQEIANQEAEPFIQSIY-KTLRPSR 120

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+  +  IVSS  IR  L K  + 
Sbjct: 121 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLC 179

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V HG  IG + G+ T N+ L+  +L   GVY      +   SY+G
Sbjct: 180 SAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAG 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 238 VMNLGMAPTMQRH-QLCLEAHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQE 296

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 297 DIRQAR 302


>gi|307706716|ref|ZP_07643521.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK321]
 gi|307617801|gb|EFN96963.1| riboflavin biosynthesis protein RibF [Streptococcus mitis SK321]
          Length = 311

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 13/295 (4%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS--P 74
             V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L    
Sbjct: 18  KTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYKPELMLHIVS 77

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+ 
Sbjct: 78  HEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDKK 136

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
                L+     +    + +  + + K + +SS+ IR A+  G V  A  LLG       
Sbjct: 137 -TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVREAGQLLGTPLPSRG 191

Query: 195 DVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T    
Sbjct: 192 MVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDIEVQ-RKRYRGMASVGKNVTF-DG 249

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                E  IFDFS +IYG+   V + D +R  +KF  +++L   + +DE+ AR  
Sbjct: 250 EEPRFEVNIFDFSDDIYGETVIVYWLDRVREMVKFDSVDELVDQLQKDEEIARNW 304


>gi|229824774|ref|ZP_04450843.1| hypothetical protein GCWU000182_00123 [Abiotrophia defectiva ATCC
           49176]
 gi|229791103|gb|EEP27217.1| hypothetical protein GCWU000182_00123 [Abiotrophia defectiva ATCC
           49176]
          Length = 299

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 5/303 (1%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +E  Q     L    V IG FDG+HLGH  ++ + +  +N     + +F+ +P +     
Sbjct: 1   MEYIQGSDFKLSDTAVTIGKFDGLHLGHKELINEVLS-SNGLTKVLFTFDVNPLSKFF-D 58

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             +  +     +  +++  G   +I + F  ET N SA+ FI+ ++ + L  K ++ GT 
Sbjct: 59  RTMRVIDTNEERRMLVQNFGLDYMINFPFDKETINTSADDFIKNIIHDKLGAKKLVVGTD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFGK R GD   L+KR   +G+    I + +    + +SS+ IR  + KG +     LL
Sbjct: 119 FRFGKGRLGDVDYLEKRSGDFGYELKVIAK-KVMYGEEISSTRIRELIKKGDIKTVNDLL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           G  F++   +IHG  +G T+G PT N++     +L   GVYA      D   Y G+ N G
Sbjct: 178 GRTFSVSGIIIHGNHLGHTVGMPTINIKPDENKLLPPFGVYASDTE-LDGKIYRGITNIG 236

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+  N  + +E+++F  ++++YG    V+  D++RPE+KF  +E++K  +  D  KA
Sbjct: 237 VKPTISENNAVGVETWLFGLNEDVYGHFAKVNLLDFIRPEMKFASLEEVKKQVNIDVIKA 296

Query: 306 RKI 308
           ++I
Sbjct: 297 KEI 299


>gi|149196216|ref|ZP_01873271.1| riboflavin biosynthesis protein RibF [Lentisphaera araneosa
           HTCC2155]
 gi|149140477|gb|EDM28875.1| riboflavin biosynthesis protein RibF [Lentisphaera araneosa
           HTCC2155]
          Length = 308

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 15/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGV-VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
           M + H++   Q L NH    V +A GNFDGIH GH  +L++AI     +     VLSF+P
Sbjct: 1   MLLCHSL---QELQNHGINDVSIACGNFDGIHRGHRKLLQKAIDQGKENNSTPVVLSFSP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE-WL 116
           HPR        I TLS    + K  E +G  AL+   F    A      FI+  L+E  +
Sbjct: 58  HPREFFTG-QCIPTLSSLERRLKTFESLGIKALVILPFNKGLAETPPRDFIKNHLLESGI 116

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +     G ++ FG DR GD  +LQ+  +   F T  +DE   +  + VSSS IR AL +
Sbjct: 117 NLTDFCVGREWLFGADRKGDINLLQEYSD--HFTTHPVDEYLLD-GEAVSSSRIRKALEE 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
                A  LL +++ +   V+ G  +    L  PTAN+     +L   GV+A+  +  D+
Sbjct: 174 HKFAEAERLLSHKWYLSGKVVKGLGLASEKLKTPTANIDTGIPLLPISGVFAVHAKI-DR 232

Query: 236 TSYSGVANFGRNPTMVPNGP--LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
             Y+G+ N G  PT +        +E  IFDFS E+Y +  ++    ++R E KF   ++
Sbjct: 233 QVYTGILNIGSAPTFLEKQQHNQHVELHIFDFSGELYDKEVSIHIHRFIRDEKKFDSPDE 292

Query: 294 LKIYMGEDEKKARKIL 309
           LK  +  D  +AR+IL
Sbjct: 293 LKKQIQHDIAQARQIL 308


>gi|269792598|ref|YP_003317502.1| riboflavin biosynthesis protein RibF [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100233|gb|ACZ19220.1| riboflavin biosynthesis protein RibF [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 333

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 7/294 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  +  IG FDG HLGH  +L +A++ A    +   VLSF PHPR +I S  P+  L  P
Sbjct: 12  RPMIWVIGYFDGFHLGHQALLREAMRAARERSVDWGVLSFTPHPRGVI-SGRPMELLFTP 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +++ +G   L    F    A+ S  +F+Q +    L    V+ G  FRFGK R+G
Sbjct: 71  RERGVLVDFLGVPVLKELPFDRALADMSPLEFLQMMEA-RLSPTGVVVGGNFRFGKGRSG 129

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+    + G+    +  L     + VSS+ IR  L  G   + + +LGY F I   
Sbjct: 130 DVDLLRDFCHRRGWFFKSVRCL-ELGGEPVSSTRIRETLVSGRAQDVSAMLGYPFMILGR 188

Query: 196 VIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V  G++ GR +GFPTAN+ +    +L   GVY       D   +    N G NPT     
Sbjct: 189 VCRGDQRGRAIGFPTANLSIPHGKLLPARGVYGALAWV-DGGWHPSALNVGFNPTFEGVR 247

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            + +E+ +  F  +IYG+   V     +R E KF  + +L   M  D ++AR+I
Sbjct: 248 GIRVEAHLMGFQGDIYGREMAVFPLKMIREEHKFPSVAQLVRQMEMDVEEARRI 301


>gi|270292632|ref|ZP_06198843.1| macrolide-efflux protein MreA/riboflavin biosynthesis protein RibF
           [Streptococcus sp. M143]
 gi|270278611|gb|EFA24457.1| macrolide-efflux protein MreA/riboflavin biosynthesis protein RibF
           [Streptococcus sp. M143]
          Length = 308

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     ++ L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-IKALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVKEVNHLLGTPLPSR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RKRYRGMASVGKNVTFYG 249

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             P   E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR  
Sbjct: 250 EEPRF-EVNIFDFSDDIYGETVIVYWLDRVRDMVKFDSVEELVDQLQKDEEIARNW 304


>gi|306825117|ref|ZP_07458459.1| riboflavin biosynthesis protein RibF [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304432553|gb|EFM35527.1| riboflavin biosynthesis protein RibF [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 308

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVKEVNHLLGTPLPSR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIARNW 304


>gi|327459837|gb|EGF06177.1| riboflavin biosynthesis protein RibF [Streptococcus sanguinis
           SK1057]
          Length = 310

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/313 (30%), Positives = 149/313 (47%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I I++   +  +  V+ +G FDG+H GH  + E+A +I    +  I VL+F   
Sbjct: 1   MMITKRI-IDEKGIDQTEDTVLVLGYFDGLHKGHQALFEKAREIATEQDLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   A  +A  F +K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLASPEDRMAQLESLGVDYLYLIDFTSHFAGNTARDFFEKY-VSRL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG DR        +  + +    V +  + N  ++ +SS+ IR  +  
Sbjct: 119 RAKAVVAGFDYHFGSDRKES----HELRDYFNGKIVIVPSV-NLDNRKISSTRIRETIAA 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +L    LLGY  +    V+HG   GRT+G+PTAN+     + L  +GVY        Q
Sbjct: 174 GDMLKTQELLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVHLPGDGVYVADVEHNGQ 233

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   +  L  E  +FDFSQ+IYG    + + D +R  +KF+ I+ L 
Sbjct: 234 -RYRGMASVGKNVTFDGD-ELRFEVNMFDFSQDIYGDTIRIFWLDKIREMVKFEGIDSLV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 AQLQSDERIARSW 304


>gi|255348455|ref|ZP_05380462.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 70]
 gi|255502997|ref|ZP_05381387.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           trachomatis 70s]
          Length = 301

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++     LP+      V IG FDG HLGH  +L    K    S   V++F+ HP 
Sbjct: 4   MDLFYSL-----LPSSNPIESVTIGFFDGCHLGHQALLSFLTKFP--SKSGVITFSQHPE 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L   G   L    F  E +N  AE FIQ +  + L    
Sbjct: 57  HTL-SNSPPETITSLEERIQLLAGCGIDYLAVLPFNQEISNQEAEPFIQSIY-KTLRPSR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G   R GK   G    L+      G     +  L+  +  IVSS  IR  L K  + 
Sbjct: 115 IVLGYDSRLGKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLC 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V HG  IG + G+ T N+ L+  +L   GVY      +   SY+G
Sbjct: 174 SAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAG 231

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PTM  +  L LE+ I DFS+++Y +  TV    +LR E  F   ++L + + E
Sbjct: 232 VMNLGMAPTMQRH-QLCLEAHILDFSEDLYDKSITVIPEQFLREEKLFSSKDELVLAIQE 290

Query: 301 DEKKAR 306
           D ++AR
Sbjct: 291 DIRQAR 296


>gi|58584673|ref|YP_198246.1| FAD synthase [Wolbachia endosymbiont strain TRS of Brugia malayi]
 gi|58418989|gb|AAW71004.1| FAD synthase [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 342

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 44/345 (12%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + ++ E  + + N++    +  GNFDGIHLGH L +    KIA     P  +L+F PH
Sbjct: 1   MKIIYDYE--RGIENNV---ALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P TI+ + +  F L     +++++   G   L    F    +  S + FI K+L++    
Sbjct: 56  PSTILFNRNN-FRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNT 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G    FG  R G+  IL+K  E YG+    ++ L  N     SSS IR  + KG 
Sbjct: 115 KHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSS-IREHIQKGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIR-------- 229
           +  A  LLG  + +   V+ G   GR +GFPT N+ +   ++  K G Y  +        
Sbjct: 174 IEIANKLLGRSYQVSGTVMKGALRGREIGFPTINIPIEDCMIKPKFGTYYAKVAFTSLDV 233

Query: 230 --------------------------FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
                                     F     +   GV N G  PT       ++E  IF
Sbjct: 234 IPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIF 293

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           DF+++IY ++  +    ++R E +F  +++L   +  D  +A ++
Sbjct: 294 DFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQL 338


>gi|251782478|ref|YP_002996780.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391107|dbj|BAH81566.1| riboflavin biosynthesis protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127366|gb|ADX24663.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis ATCC
           12394]
          Length = 310

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 148/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPH 58
           M +   I+  Q + +  +  V+ +G FDG+H GH  + ++A +IA    + V++  FN  
Sbjct: 1   MDI-EYIKGYQDI-HQEEDTVLVLGYFDGLHRGHKALFDKAQEIARAENLAVVTLTFNES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP   L  + P  + +   + G   L    FT   +  S++ FI    ++ L
Sbjct: 59  PRLAFSRFSPDLLLHITYPEKRHEKFAEYGVDRLYLIDFTSAFSMLSSDDFIAHY-IKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +  +   I E+  ++ + +SS+ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYLA---RNFDGNVYTIPEVTEDQ-EKISSTRIRKLILE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY         
Sbjct: 173 GEVAKANQLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDSTYLPADGVYVTDVLVNG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             +  + + G+N T      L LE+ IF F  +IYG+   + + D +R   KF  I+ L 
Sbjct: 232 KKHRSMTSIGKNVTF-GGKELRLEANIFGFEGDIYGESIEIIWLDKIRDMAKFDGIKDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 ERLELDKETALNW 303


>gi|306829617|ref|ZP_07462807.1| riboflavin biosynthesis protein RibF [Streptococcus mitis ATCC
           6249]
 gi|304428703|gb|EFM31793.1| riboflavin biosynthesis protein RibF [Streptococcus mitis ATCC
           6249]
          Length = 308

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GKTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + A+ + ++F     V  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFASLTGQEFFDTY-VRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                +     + +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 KTAVDL----KDYFDGEIIIVPPVEDEKGK-ISSTRIRKAILDGDVKEVNHLLGTPLPTR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  I++L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSIDELVDQLQKDEEIARNW 304


>gi|71066316|ref|YP_265043.1| riboflavin kinase / FMN adenylyltransferase [Psychrobacter arcticus
           273-4]
 gi|71039301|gb|AAZ19609.1| riboflavin kinase / FMN adenylyltransferase [Psychrobacter arcticus
           273-4]
          Length = 347

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 34/320 (10%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFT 71
           P  L   V+ IGNFDG+HLGH  +L Q  ++A    +   V+ F P PR     ++    
Sbjct: 22  PVALAPCVLTIGNFDGVHLGHQAMLAQVRELAKARKLNSAVMIFEPQPREFFAPAAAPAR 81

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+  + ++ +L + G   LI   F  E  + SA+ F   +L   L V+ ++ G  F+FG 
Sbjct: 82  LTNLAEKQALLAEYGVETLIVAGFDNEFRSLSAQAFAD-ILARRLNVQALVLGDDFKFGH 140

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           DR GD   L+     YG H   +  + ++  K+  +SS+ IR  L  G +  A  LLG  
Sbjct: 141 DRTGDSQFLR----DYGLHVTNLHTVNDDSHKAARISSTRIRDLLLAGDINAANALLGRD 196

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT------------- 236
           + I   V+ G+KIGRT+ FPTAN+ L        G++A+   + DQ              
Sbjct: 197 YAITGTVVGGDKIGRTMDFPTANIDLERMKPALHGIFAVDVVSLDQDGNVIPDGLYKRAD 256

Query: 237 ------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRP 284
                       S  G AN G  P++       LE    +   ++YG    V F  YL  
Sbjct: 257 NNHKGITGLRAHSLFGTANIGTRPSVDKTHEWRLEVHFPELQADLYGSTLQVRFLHYLHG 316

Query: 285 EIKFKDIEKLKIYMGEDEKK 304
           E  ++ ++ LK  +  D ++
Sbjct: 317 ERHYESLDALKEGIHHDVQE 336


>gi|313888291|ref|ZP_07821962.1| riboflavin biosynthesis protein RibF [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845694|gb|EFR33084.1| riboflavin biosynthesis protein RibF [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 302

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/310 (27%), Positives = 163/310 (52%), Gaps = 12/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M +   IEI+ +     +  V+A+GNFDG+H GH  ++ +A+K A       ++L FN H
Sbjct: 1   MKI---IEIDLNYIAD-EDSVIALGNFDGVHKGHMELINRAVKNAKKLNIKSSLLLFNEH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              +++       ++    + +I+E +G   +    FT E   Y+   F++  L + L++
Sbjct: 57  TDNLVKVGKK-DIITTNQTKFEIIEGLGVDIIYLINFTREFMAYTPIMFLKDFLADNLKI 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  + +G  ++GD   L K   KY F +V + +  ++    +SS+ IR+ + +G 
Sbjct: 116 KGIVVGYDYTYGYKKSGDVDFLNK--NKYLFKSVDVIDQISSHGVKISSTLIRSLIEEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS 237
           +  A  LL   + +  ++IH + +G+ +G+PTAN++L    ++ + GVY           
Sbjct: 174 LKEANELLSRPYKLIGEIIHAKGLGKKMGYPTANLKLIDNFVIPRFGVYDTDIIING-ER 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +    N G NPT+  +G + +E+ I DF+++IYG+   +   D++RPE+KF  IE+L   
Sbjct: 233 FRASTNIGTNPTVEHDG-IKIEAHILDFNRDIYGEIVELELLDFVRPELKFDSIEELFEQ 291

Query: 298 MGEDEKKARK 307
           + +D    R 
Sbjct: 292 IAKDVLVTRN 301


>gi|313679897|ref|YP_004057636.1| fmn adenylyltransferase; riboflavin kinase [Oceanithermus profundus
           DSM 14977]
 gi|313152612|gb|ADR36463.1| FMN adenylyltransferase; riboflavin kinase [Oceanithermus profundus
           DSM 14977]
          Length = 295

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 15/295 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
              VVA+G+FDG+HLGH  +L +A  +      P+ V +F+P  +  ++    +  LS  
Sbjct: 13  GPKVVAVGSFDGVHLGHQSLLAKARALAAQERLPLLVYTFDPPTKVFMRG---VGMLSTL 69

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S +  +L + G    +   F  + A      F+  ++   LE + ++ G  F FG+ R+G
Sbjct: 70  SEKLDLLREQGVDLALAVPFDEDFAARDKAAFLDDLV--RLEARRLVVGEDFAFGRGRSG 127

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+               L +     V S+ IR  L +G V  A HLLG  +     
Sbjct: 128 GPADLK------TVAPTLTVPLLDLGGAPVKSTRIRELLEQGDVEAARHLLGRPYGARGI 181

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V  GE++GR LGFPTAN++ +P  +L  GV+A R    ++  Y  V N G  PT+  +G 
Sbjct: 182 VRQGERLGRRLGFPTANVETAPGKVLPRGVFAARTWVAERA-YPAVVNVGTRPTVRGSG- 239

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L LE+ +  FS E+YG    + F   LR E  F+D+E L+  +  D + AR+   
Sbjct: 240 LRLEAHLIGFSGELYGHELRLVFLKKLRDERAFEDLEALRSQIARDLEAARRFFR 294


>gi|294084714|ref|YP_003551472.1| FMN adenylyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664287|gb|ADE39388.1| FMN adenylyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 327

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 9/302 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            AIGNFDG+H GH  +++ A      ++    V++F+PHPR   +     F L+    ++
Sbjct: 28  AAIGNFDGVHRGHQKVIQAACIHAATHDLTPAVITFDPHPREFFRQDDIPFHLADRHEKD 87

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L ++    +I   F        A+ F+  + +  L V  +  G+ F FG  R GD   
Sbjct: 88  RLLGQLAVDQIIHVTFDDALRRTDAKVFVTDI-LPALGVVQLFAGSDFAFGHGRGGDIDT 146

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           + + G         +  L ++ S I+SSS IR AL  G   +AA +LG+ + I   V  G
Sbjct: 147 INEIGRMAHISATTVPLLVDDNSIIISSSRIRAALQAGAPEHAAAMLGHDWAISGIVQTG 206

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRF-----RTQDQTSYSGVANFGRNPTMVPNG 254
           +K GRT+GFPTAN+ L   +    GVYA++       +  Q   +GVAN G  PT     
Sbjct: 207 DKRGRTIGFPTANISLGNLLHPAFGVYAVQVFEDNGTSDGQFIANGVANIGIRPTFET-R 265

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +L E+ +FD+  +IYG+R +V    +LR E KF  +E+LK+ + +D   AR+IL ++  
Sbjct: 266 DVLCETHLFDYDGDIYGRRLSVRLKSFLRAERKFSGLEELKVQIAKDAADARQILPATQK 325

Query: 315 LS 316
           ++
Sbjct: 326 IA 327


>gi|113954373|ref|YP_730007.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9311]
 gi|113881724|gb|ABI46682.1| riboflavin biosynthesis protein RibF [Synechococcus sp. CC9311]
          Length = 309

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/299 (32%), Positives = 152/299 (50%), Gaps = 6/299 (2%)

Query: 9   INQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSS 66
           I+   P   K    +A+G+FDG+H GH  ++    +  +   I TV+SF PHPR ++   
Sbjct: 2   IHLCSPQQAKTPTTLALGSFDGLHAGHRRVISSVTETDHLHAIPTVVSFWPHPREVLHGE 61

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            P   L  P  + ++LE +    L+   F  + A  SA  F+++VL+  L+ + +  G  
Sbjct: 62  -PRLRLDLPEEKLELLEPLSIQQLVLVPFNRQLAQLSAADFVEQVLLGCLKARQIAVGAN 120

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG+ R GD   L+   E  G     +  L + + ++ SSS IR AL+ G +  A+ LL
Sbjct: 121 FRFGRGRKGDTNTLRALAEAAGVQVSVLPILEDAEGRM-SSSRIREALSNGDLQTASALL 179

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ-DQTSYSGVANF 244
           G  +     V+ G  +GR LG+PTAN+Q+     L   GVYA R  TQ D  +   V N 
Sbjct: 180 GRPYRFRGTVVRGRGLGRDLGWPTANLQVDGRKFLPGLGVYAARAWTQRDGEALPAVMNL 239

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G  PT+ PN P  +E  + D   E+ GQ   V   + LR + +F  +++L   +G+D  
Sbjct: 240 GPQPTVDPNSPSAVEVHLLDRRIELVGQELVVEPVERLRGQQRFSGLDELSAQIGQDAD 298


>gi|50083318|ref|YP_044828.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Acinetobacter sp. ADP1]
 gi|49529294|emb|CAG67006.1| bifunctional protein [Includes: riboflavin kinase (Flavokinase);
           FMN adenylyltransferase (FAD pyrophosphorylase) (FAD
           synthetase)] [Acinetobacter sp. ADP1]
          Length = 333

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 34/329 (10%)

Query: 1   MHVFHNIEINQSLPN-HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNP 57
           M +   + +N   P+  L    V IGNFDG+HLGH  ++ Q   IA  N+    V+ F P
Sbjct: 1   MKL---LRLNALSPDFELAATAVTIGNFDGVHLGHQAMISQLKNIADANSLKTLVMIFEP 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            P    +       +S    + + L ++G   +   KF       SA++F   +    L 
Sbjct: 58  QPLEYFKGYEAPPRISSLREKVEYLTELGVDYIAIAKFDHYFRGLSAQEFADLLKF-KLN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            K ++ G  F FGK+R G+   L+     YGF    +D +   K + VSS+ IR  L +G
Sbjct: 117 AKQLVLGDDFHFGKNRQGNSEFLR----DYGFKITNLDTI-EFKGERVSSTRIRQVLAEG 171

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---- 233
            +  AA LLG  +++   V +G++IGRTL FPT N++L        G+Y +    +    
Sbjct: 172 DLALAAKLLGRPYSMIGRVQYGDQIGRTLNFPTINVRLGRHKPCLSGIYGVDVVCETTSL 231

Query: 234 -----------------DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCT 275
                            D  S  G  + G  P +    P   LE    + S  +YG    
Sbjct: 232 RKKIMHDPNAPKGIAGYDPDSLYGAGHVGTRPAIKQAHPEWRLEVHFPEVSANLYGLLMR 291

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           V+F  YL  E  +  ++ LK  + +D + 
Sbjct: 292 VTFLHYLHGERNYPSLDALKAGIDQDVED 320


>gi|300173105|ref|YP_003772271.1| riboflavin biosynthesis protein RibF [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887484|emb|CBL91452.1| riboflavin biosynthesis protein RibF [Leuconostoc gasicomitatum LMG
           18811]
          Length = 316

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 167/311 (53%), Gaps = 9/311 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTII 63
           +  I + +       VVA+G FDG+HLGH  +++QA         P+ VL+++P P  + 
Sbjct: 8   HYPILKKIIPDPTPQVVAMGFFDGVHLGHQAVIKQAKLEADKQGVPLAVLTYDPQPIVVF 67

Query: 64  QS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +  + P+  L+  + +  +L  +G + +   +FT + A  + ++F+ +V++  L   TV+
Sbjct: 68  EMLTQPLRYLTSINQKAALLADLGVNTMYVMQFTSQLAKLAPQEFVNQVIM-RLNPVTVV 126

Query: 123 TGTKFRFGKDRA-GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            G    +G D +  D   L +  +K  F+ V + EL +  +Q + SS+IR AL  G +  
Sbjct: 127 GGFDHVYGGDVSIADMDHLPQYAKKR-FNVVSVSEL-DVNNQKIGSSSIRKALELGSMNI 184

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSG 240
               LG        VIHGE  GR LGFPT N++    + L   G+YA++    D   + G
Sbjct: 185 VNSQLGRIHQTTGLVIHGEARGRELGFPTVNIKTPELEWLPTIGIYAVKIMIGD-DWHLG 243

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           +A+ GRN T     P+ +E  I DF+Q++YG+  TV++++YLR E+KF +I +L   + +
Sbjct: 244 MASIGRNITFGDARPITVEINILDFNQQVYGENVTVNWYNYLRGEVKFTNIPELVTQLKK 303

Query: 301 DEKKARKILES 311
           DE   R+  ++
Sbjct: 304 DEIATRQYFDA 314


>gi|89898352|ref|YP_515462.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila felis Fe/C-56]
 gi|89331724|dbj|BAE81317.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56]
          Length = 304

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 141/312 (45%), Gaps = 13/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F+++    S  +      + IG FDG HLGH  +L             +++F+ HPR
Sbjct: 1   METFYSLTSIHSSVDS-----ITIGFFDGCHLGHKKLLSVLSSYP--GSSGIITFDSHPR 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            I+QS +P   ++    +  +L+      L    FT   A+ SAE FI  +  + L  K 
Sbjct: 54  AILQSPTP-KLITNTKERILLLQDFSIDYLCILPFTQSFADKSAESFILSL-HQTLGCKR 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   R GK   G+   LQ   +  G   + +   + +  +IVSS  IR  L +G + 
Sbjct: 112 LILGYDSRLGKGGEGNAQTLQPLADSLGIEIIEVPPYKIDN-EIVSSKRIRQFLVQGDLD 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NA   LG+ +     +  G  +G  LG  T N+      LL  GVYA     Q    Y G
Sbjct: 171 NANRHLGHSYKYVGKIETGYGLGTQLGVATINL-PQEQCLLPYGVYACEIEHQ-AKVYQG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + N G  PT+  N  L LE+ +FDFS ++YG+  +V    +LR E +F   E L   +  
Sbjct: 229 IMNIGEAPTVERNS-LCLEAHLFDFSGDLYGEIVSVIPKKFLRQEERFPSQEDLSQAIRT 287

Query: 301 DEKKARKILESS 312
           D   A+    +S
Sbjct: 288 DINNAKAFFSTS 299


>gi|300933066|ref|ZP_07148322.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Corynebacterium resistens DSM 45100]
          Length = 339

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 138/336 (41%), Gaps = 46/336 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G  V IG FDG+H GH  ++E+ I  A     P  + +F+PHP  +         L    
Sbjct: 4   GSAVTIGVFDGVHRGHQQLVERVIAKARELGVPSVMYTFDPHPTVVFSPERVPALLGTVE 63

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++   MG   ++   FT E A++S  +++ + LV+ L  K V+ G  F FG   AG 
Sbjct: 64  QRAELAHSMGIDHVVVVGFTPEIASWSPAEYVDRALVDMLRAKAVVVGDNFTFGHKAAGT 123

Query: 137 RGILQKRGEKYGFHTVFIDELRNNK-----------SQIVSSSNIRTALTKGHVLNAAHL 185
             +LQ+ G + G     I  L ++              +V S+ IR  L  G+V  AA  
Sbjct: 124 AQMLQELGAERGIDVDVISLLADSDATLGTEAEHPRDWVVCSTYIREQLAAGNVAAAARA 183

Query: 186 LGYRFTIESDVIH-GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ-------- 235
           LG  F++  +V H   + GR LGFPTAN+       L  +GVYA                
Sbjct: 184 LGRNFSVRGEVTHGAGRGGRALGFPTANLYFQDKYALPADGVYAGYVTVLPDQVDREAQV 243

Query: 236 ----------------------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR 273
                                        + G NPT   + P  +ESFI D   ++YG  
Sbjct: 244 QQPGEPPILVKAGQKVGTMPVGERLPAAISVGTNPTF-GHEPRSVESFILDHEADLYGLD 302

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             V F   +R +  + D+++L   +  D    R  L
Sbjct: 303 VEVEFIARIRGQETYSDLDELIAAIQRDVDATRDAL 338


>gi|322375349|ref|ZP_08049862.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C300]
 gi|321279612|gb|EFX56652.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C300]
          Length = 308

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 13/296 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLS-- 73
              V+ +G FDGIH GH  + E A K    +  P+ V++F   P+  +Q   P   L   
Sbjct: 17  GNTVLVLGYFDGIHKGHQKLFEVASKASMKDYLPVVVMTFTESPKLALQPYQPELMLHIV 76

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +E  ++  G  AL    F+ + AN + ++F     +  L+   ++ G  + FG D+
Sbjct: 77  NHEEREHKMKWHGVEALFLLDFSSKFANLTGQEFFDTY-IRALKPAIIVAGFDYTFGSDK 135

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                 L+     +    + +  + + K + +SS+ IR A+  G V    HLLG      
Sbjct: 136 K-TADDLKDY---FDGEIIIVPPVEDEKGK-ISSTRIRQAILDGDVKEVKHLLGTPLPSR 190

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG   GRT+G+PTAN+ L     +  +GVY +    Q +  Y G+A+ G+N T   
Sbjct: 191 GMVVHGNARGRTIGYPTANLVLRDRTYMPADGVYVVDVEVQ-RQRYRGMASVGKNVTF-D 248

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 E  IFDFS +IYG+   V + D +R  +KF  +E+L   + +DE+ AR  
Sbjct: 249 GEEPRFEVNIFDFSDDIYGETVMVYWLDRVRDMVKFDSVEELVDQLQKDEEIARNW 304


>gi|188996310|ref|YP_001930561.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931377|gb|ACD66007.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 309

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 10/300 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +     IGNFDG+H GH  IL++   I    N    V++F PHPR I+       ++   
Sbjct: 12  EKTACTIGNFDGVHKGHKEILDKLKNIASERNLKTVVITFYPHPRKILNPQQYKCSIVNL 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + ++L++     ++   F         E F+  +  E +  K ++ G  +RFG  R+G
Sbjct: 72  ETKVQLLKEAKIDYILVIDFDKNFYEKQPEDFLNFL-KEKINCKYLVVGKDWRFGHKRSG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  + +   EK  +  V I+++   +++ +SSS+IR  L  G +  A  LLG  + +   
Sbjct: 131 DINLAKSLEEKLDYKVVIIEDI-TEENKRISSSDIRDFLKNGSLEKAVQLLGRDYYLIDK 189

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           V+ G+K GR LGFPT N++   D+ LK+GVYA  F   +      V N+G  PT+     
Sbjct: 190 VVEGDKKGRELGFPTINLKPDDDLCLKKGVYAG-FICYENVCQKAVINYGNRPTVDGTKT 248

Query: 256 LLLESFIFDFSQEIYGQR---CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
            + E+ I +   +I+ +      + F  YLR E KF  +++LK  +  D +KA ++L  S
Sbjct: 249 FM-EAHIIE-DLKIHPKTNDYVKLVFKTYLREERKFNSVDELKNQIKLDIQKALEVLNES 306


>gi|167758072|ref|ZP_02430199.1| hypothetical protein CLOSCI_00410 [Clostridium scindens ATCC 35704]
 gi|167663969|gb|EDS08099.1| hypothetical protein CLOSCI_00410 [Clostridium scindens ATCC 35704]
          Length = 308

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 146/312 (46%), Gaps = 11/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M     +       N      V  G FDG+H GH  ++++  +    +     V +F+  
Sbjct: 1   MQYIRGLSNY----NDSGKSAVTFGKFDGLHKGHQKLVKKVREFGEKNKINSIVCAFDMR 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P    +  +P   ++    Q  +  +     LI   FT E +   AE+FI+ ++      
Sbjct: 57  PLWEEKGLNPQLLMNGKEQQMHLEGQ--VDYLIECPFTREFSQIPAEEFIKDIIKGLFHA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ GT F FG D+ GD  +L    ++ G+  V +++ R    +I+SS+ ++  L  G 
Sbjct: 115 DYVVVGTDFCFGHDKQGDIHMLAAYEKECGYDLVVVEKERYED-RIISSTYVKEVLRSGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS 237
           +  A+ LLGY + +   V HG+K+GRTLGFPT N+      I    GVY       D+  
Sbjct: 174 MKLASRLLGYPYGLTGIVEHGKKLGRTLGFPTFNVAWPKAKIAPPNGVYLCDVTV-DKDR 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+AN G  PT+     LL+ESF+F ++   YG+  T+      RPE KF  IE++K  
Sbjct: 233 YHGIANVGVKPTVTSENRLLIESFLFGYAGSAYGKEVTIELLSMCRPEQKFDSIEEMKAC 292

Query: 298 MGEDEKKARKIL 309
           +  D +  +   
Sbjct: 293 IDRDIEAGKHFF 304


>gi|219558795|ref|ZP_03537871.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis T17]
          Length = 386

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 18/301 (5%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPR 60
           +         +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PHP 
Sbjct: 68  IVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPM 127

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++   S    L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V  
Sbjct: 128 EVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVE 187

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALTKG 177
           V+ G  F FGK  AG+   L++ GE++GF       + E  +N++   SS+ IR+ +  G
Sbjct: 188 VVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAG 247

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ- 235
            ++ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F      
Sbjct: 248 DMVAAMEALGRPHRVEGVVVRGEGRGAALGFPTANVAPPMYSAIPADGVYAAWFTVLGHG 307

Query: 236 ---------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD-YLRPE 285
                      Y    + G NPT        +E+F+ D + ++YGQ   +     Y RPE
Sbjct: 308 PVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALGLRRAYPRPE 366

Query: 286 I 286
            
Sbjct: 367 E 367


>gi|146329723|ref|YP_001209013.1| riboflavin kinase RibF [Dichelobacter nodosus VCS1703A]
 gi|146233193|gb|ABQ14171.1| riboflavin kinase RibF [Dichelobacter nodosus VCS1703A]
          Length = 319

 Score =  268 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 95/325 (29%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNP 57
           M ++      + + P      V+ IGNFDG+H GH  ++   Q +       +T +SF P
Sbjct: 4   MKIYRCTTRFHLTAPR-----VLMIGNFDGVHRGHQKMISCLQEMAAPQKLVLTAMSFYP 58

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HPR  +        LS    +   LEK G    I   FT      +AE F+Q  L   L+
Sbjct: 59  HPRQ-LTRQQAPQFLSTIHDRAYFLEKYGIEDWILVPFTPSFMQLAAEDFVQTYLFNQLD 117

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++ ++ G  FRFG   AG+  +L+K   K       +  + + +++ +SSS IR AL + 
Sbjct: 118 LRALLVGDDFRFGYRGAGNVDLLRK-MSKNALKIAALATVADEQAR-ISSSRIRQALLQH 175

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT--QDQ 235
            +  A HLLG+  T    V  G   GR +G PTAN+ +SP   L +GVY ++ R     Q
Sbjct: 176 RLDEATHLLGHALTFTGLVRAGAARGRKIGVPTANIHVSPYWCLPDGVYVVKLRRCKAPQ 235

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ------EIYGQRCTVSFFDYLRPEIKFK 289
             +  VAN G  PT         E  +   S        +YG R  ++   +LR E KF+
Sbjct: 236 QWHWAVANLGTAPTFSGQQRKW-EVHLLPDSHGVSQAFHLYGCRVQIAVMQFLRTEKKFE 294

Query: 290 DIEKLKIYMGEDEKKARKILESSYP 314
           +++ L   + +D   A+ ++ +  P
Sbjct: 295 NMQALSDQIHQDIAAAQSVIAAQTP 319


>gi|241889583|ref|ZP_04776881.1| riboflavin biosynthesis protein RibF [Gemella haemolysans ATCC
           10379]
 gi|241863205|gb|EER67589.1| riboflavin biosynthesis protein RibF [Gemella haemolysans ATCC
           10379]
          Length = 305

 Score =  268 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 85/311 (27%), Positives = 152/311 (48%), Gaps = 13/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA-NNSPITVLSFNPHP 59
           M +F NI     +    K  V A+G FDGIH  H  I+  A++ A       V++ +  P
Sbjct: 1   MEIF-NISDISEIKEENKKRVAALGFFDGIHKAHQKIIGSAVEAAGKGFKSAVITLDKSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     +S   +L+P + + ++L  +G   +   +F  +  N SA++FI  + ++ L V+
Sbjct: 60  KEYFGKTSE-ESLTPTNKKNELLTSLGVDEVYYLEFNEKLQNLSAKEFINNI-LKKLNVE 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  +RFG    G   +++      G     + E +    + +S++ +   + KG  
Sbjct: 118 KVFCGFDYRFGYKGLGTPDLIKDS----GIEV-IVQEKQKIDEEKISTTVLIEFVRKGEF 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTS 237
                  G  ++I   V+ G ++GRT+ FPTAN++L    LL +  GVY  + +  +   
Sbjct: 173 SKYKAYTGRFYSISGLVVKGRQLGRTINFPTANLELDDKYLLPDTNGVYITKIKVNNNI- 231

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  V N G NPT+        +E+ I DF ++IYG++  + F+++LR E KF+  + LK 
Sbjct: 232 YKSVTNIGYNPTVSDEKNKKFIETHILDFDEDIYGEKIEIYFYEFLRKEQKFESFDHLKE 291

Query: 297 YMGEDEKKARK 307
            +  D+K   +
Sbjct: 292 QLKLDKKNCEE 302


>gi|225874890|ref|YP_002756349.1| riboflavin biosynthesis protein RibF [Acidobacterium capsulatum
           ATCC 51196]
 gi|225794117|gb|ACO34207.1| riboflavin biosynthesis protein RibF [Acidobacterium capsulatum
           ATCC 51196]
          Length = 322

 Score =  268 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 90/319 (28%), Positives = 135/319 (42%), Gaps = 16/319 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M VF +++    +P  L   V AIGNFDG+H GH  I+      A         ++F+PH
Sbjct: 1   MQVFRSLD---EIPAALGPTVAAIGNFDGVHRGHQAIIADVRARAAALQAASVAVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++  +    ++P   +  +L   G  A +   FT E +   A  F ++VL   L  
Sbjct: 58  PVRLLRPEAAPRLITPLPERLDLLAATGLDATLVLPFTREFSQTPARDFAERVLARGLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  FRFG+        L + G++ GF       +   +   VSSS +R  +  G 
Sbjct: 118 VEVHEGDSFRFGRGAEAGTPELVEFGKEMGFAVYG-HRVLTVRGVPVSSSEVRRRIAAGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ---DQ 235
           +  A  LLG  F++ S    G  IG  L  PT N+    +++   GVY  R R      +
Sbjct: 177 MGMARALLGRAFSVCSTQERGRGIGSRLLVPTINLAAYDELVPAHGVYVTRVRIGAGAAK 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-----EIYGQR-CTVSFFDYLRPEIKFK 289
            S+  V N G  PT        +ES++  ++      EI  +    V F   LR E  F 
Sbjct: 237 RSFRAVTNCGVRPTF-GVERFAIESYLLGWNPEADPVEITPETPVEVCFLQRLRDEQAFP 295

Query: 290 DIEKLKIYMGEDEKKARKI 308
             E LK  +  D  KA   
Sbjct: 296 SPEALKAQIMRDVAKAEHY 314


>gi|296876752|ref|ZP_06900800.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432254|gb|EFH18053.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 15912]
          Length = 314

 Score =  268 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 89/296 (30%), Positives = 151/296 (51%), Gaps = 13/296 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSP--IFTLSPP 75
            V+ +G FDG+HLGH  + ++A +I       + +L+F   P+       P  +  L  P
Sbjct: 18  TVLVLGYFDGLHLGHQELFKKARQIAGEKGLKVALLTFPESPKLAFVRYQPELLLHLQSP 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  + FG D+  
Sbjct: 78  EDRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSFGSDKK- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L      +      I  + + + + +SS+ IR A+ +G V  AA LLG+  +    
Sbjct: 136 NASDLAAY---FDGQVEVISPVLD-QGEKISSTRIRQAVLEGRVQEAARLLGHPLSSRGI 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+G+PTAN+  +    L  +GVY +    + Q  Y G+A+ G+N T     
Sbjct: 192 VVHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQI-YRGMASVGKNVTF-DGK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R   E
Sbjct: 250 ELRFEVNLFDFSGDIYGHTLTIHWLDKIREMVKFDGIDQLVAQLKEDEAVSRNWTE 305


>gi|88801254|ref|ZP_01116790.1| hypothetical protein MED297_18248 [Reinekea sp. MED297]
 gi|88776005|gb|EAR07244.1| hypothetical protein MED297_18248 [Reinekea sp. MED297]
          Length = 282

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 9/260 (3%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           + LK   V IG+FDG+H+GH  I+++  +   AN+    V++F P PR  +   +    L
Sbjct: 9   SPLKPAAVTIGSFDGVHVGHQQIIQRLTRYAQANDLSSVVVTFEPQPREFLSPENAPARL 68

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           S  + +   L ++G   L+   F     + SA+ F++ VL++ L  + +  G  FRFG D
Sbjct: 69  SSLTDKALRLAELGVDHLVVLPFNRRLRSLSADDFVRSVLIDRLNTQWLQVGDDFRFGAD 128

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           R G+   L+     Y F    +   R +  + VSS+ IR A+ +     AA LLG  F +
Sbjct: 129 RKGNVDFLRN----YAFDVTDLPSQRVD-GERVSSTLIRQAIAENDFNRAATLLGESFAL 183

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
              V++G ++GRT+G PTAN+ L    L  +GV+A+      +T + GVAN G  PT+  
Sbjct: 184 SGRVVYGRQLGRTIGVPTANILLPHHRLPTDGVFAVSSAIDGKTIH-GVANLGPKPTVGD 242

Query: 253 NGPLLLESFIFDFSQEIYGQ 272
           +  L LE+  FD+   +YG+
Sbjct: 243 H-RLWLETHFFDYDGHLYGR 261


>gi|258544243|ref|ZP_05704477.1| riboflavin biosynthesis protein RibF [Cardiobacterium hominis ATCC
           15826]
 gi|258520481|gb|EEV89340.1| riboflavin biosynthesis protein RibF [Cardiobacterium hominis ATCC
           15826]
          Length = 313

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 142/317 (44%), Gaps = 11/317 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M + H  +   +LP   +   + IGNFDG+H GH  IL+  +      +    +LSF PH
Sbjct: 1   MQI-HRWQRRLALP---QPVALTIGNFDGVHRGHQAILQTLLAEAAREDLAPVLLSFFPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+ ++   SP   L+P   +   L   G    +   FT      +   FI+  L+     
Sbjct: 57  PKALVSGESP-SLLTPLRDRAHWLAAAGLPHWLLLSFTRALMQKAPADFIRDYLLPLRLR 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
              + G  FRFG    GD  +LQ+  ++ GF    +  +  + ++ +SSS IR AL    
Sbjct: 116 FL-LVGDDFRFGYRGQGDFALLQRFADECGFRVQSLATVSADGAR-ISSSRIRAALAAHD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTS 237
           +  A  LLG+  T    V HG+  GR L  PTAN+ L     L +GVY ++    Q    
Sbjct: 174 LDGARALLGHDLTFTGKVRHGDGRGRALHTPTANLHLPASWCLPDGVYVVQVAPPQPGAL 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + GVAN G  PT        LE  +F+ +  +YGQ   V    YLR   +F D   L+  
Sbjct: 234 HWGVANVGTTPTFGGI-RRKLEVHVFEQNAALYGQTLRVHIRHYLRDVRRFADAAALQAQ 292

Query: 298 MGEDEKKARKILESSYP 314
           + +D  +A   +    P
Sbjct: 293 IRDDIARAHAFINQELP 309


>gi|24379574|ref|NP_721529.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus mutans UA159]
 gi|24377520|gb|AAN58835.1|AE014951_6 putative macrolide-efflux protein [Streptococcus mutans UA159]
          Length = 306

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+ ++ +    +  V+ +G FDG+H GH  +  QA +IA      I VL+F   
Sbjct: 1   MEIIK-IDSHKDI-EQQEDSVLVLGYFDGLHRGHKELFNQAREIAQKMQLKIVVLTFPES 58

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P     ++ P  +     + G   L    FT   A  S++ FI+   ++ L
Sbjct: 59  PQLAFTRFEPDLLNHINYPEKRYCKFAEYGVDCLYLTDFTSSFAKISSDDFIKNY-IKAL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K V+ G  ++F   +A +   L+          + + E++  + + +SS+ +R  + +
Sbjct: 118 KAKAVVMGFDYKFSHSKA-NSDYLKHHFAGQ---VITVPEVQY-EGKKISSTRVRQLIKQ 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +     LLGY F+    V+HG+  GRT+GFPTAN+  L    L  +GVY +      +
Sbjct: 173 GDMTQVNRLLGYEFSTRGIVVHGDARGRTIGFPTANLAPLDRTYLPADGVY-VADVIVGR 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   + + + +R  +KF  +  L 
Sbjct: 232 KRYRSMTSIGKNITF-GGTELRLEANIFDFDDDIYGETIEIFWLNKIREMVKFNSVNDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 EQLKSDKEIAINW 303


>gi|210612472|ref|ZP_03289330.1| hypothetical protein CLONEX_01531 [Clostridium nexile DSM 1787]
 gi|210151580|gb|EEA82587.1| hypothetical protein CLONEX_01531 [Clostridium nexile DSM 1787]
          Length = 311

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 11/313 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M     ++  Q+     K   + +G FDG+H+GH  ++E+ I    N      V +F+  
Sbjct: 1   MQYIKGMQFYQN----DKKTAITLGKFDGLHIGHETLIERIIAHQKNDGVDSVVFAFDMA 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P            ++      ++L +     L+   F    +   AE FI+++LVE    
Sbjct: 57  PLYEKLKKKKESLITNEERAGRLLGR--VDYLVECPFVEAVSKIEAETFIKEILVEQFHA 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ GT F FG  + GD  +LQ+   +YG+    I++ +  + + +SS+ I+  + KG+
Sbjct: 115 KYIVVGTDFHFGYQKKGDYHMLQQYSGEYGYEVEVIEK-KCYEDREISSTYIKEEVKKGN 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTS 237
           +     LLGY +T+  +V +G+++GR LGFPT N+      +L   GVY    R      
Sbjct: 174 MKLVTQLLGYPYTVTGEVQYGKQLGRKLGFPTMNIVAEKEKLLPPNGVYVSSIRIDGM-L 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G++N G  PT+     + +E+F+FD+  + YG++  V+ ++Y+RPE KF  +E L+  
Sbjct: 233 YGGISNIGCKPTVSEKEQMGIETFVFDYHGDAYGKKIEVALYEYVRPEKKFHSVEMLRKQ 292

Query: 298 MGEDEKKARKILE 310
           + +D    RK L+
Sbjct: 293 VEQDIAYGRKWLQ 305


>gi|322411872|gb|EFY02780.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 310

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 147/313 (46%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPH 58
           M +   I+  Q + +  +  V+ +G FDG+H GH  + ++A +IA    + V++  FN  
Sbjct: 1   MDI-EYIKGYQDI-HQEENTVLVLGYFDGLHRGHKALFDKAQEIARAENLAVVTLTFNES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           PR      SP   L  + P  + +   + G   L    FT   +  S++ FI    ++ L
Sbjct: 59  PRLAFSRFSPDLLLHITYPEKRHEKFAEYGVDRLYLIDFTSAFSMVSSDDFIAHY-LKLL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +      I E+  ++ + +SS+ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYLA---RNFDGDVYMIPEVTEDQ-EKISSTRIRKLILE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V    HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY         
Sbjct: 173 GEVAKVNHLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVNG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IF F  +IYG+   + + D +R   KF  IE L 
Sbjct: 232 KKYRSMTSIGKNVTF-GGKELRLEANIFGFEGDIYGESIEIIWLDKIRDMAKFDGIEDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 ERLELDKETALNW 303


>gi|298373600|ref|ZP_06983589.1| riboflavin biosynthesis protein RibF [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274652|gb|EFI16204.1| riboflavin biosynthesis protein RibF [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 305

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 7/292 (2%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           H    V  IG FDG+HLGH  +L+        N     V++F  +P+        I  L+
Sbjct: 11  HGTPTVATIGFFDGVHLGHKFLLDSVADEARRNGKKSVVVTFVHNPKKFFDCRYDIRQLT 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + +   +        +   F  + A  +A+ F+  +   +  + T+  G    FG DR
Sbjct: 71  TTAEKTPKISSCDIDYCLLLDFDQQIATQTAKDFLAFLKHSFC-LDTLFVGYDHTFGSDR 129

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             D   ++      G       E  +   Q VSSS IR  L  G +L A  +LGY+++++
Sbjct: 130 IRDFDKIEAICNAMGIKAHK-SEQFDLTGQTVSSSRIREYLHNGKILEANAMLGYKYSLK 188

Query: 194 SDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP 252
             V+HG+ IGRTLGFPTAN+++ S  +L   GVYA+     D   + G+ N G  PT+  
Sbjct: 189 GIVMHGQMIGRTLGFPTANLKIISDKLLPHNGVYAVE-VIIDGIRHKGMLNIGNRPTVDG 247

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                +E  IFDF ++IYG+   V F  ++R E+KF  +E+LK  +  D + 
Sbjct: 248 VNH-TVEVNIFDFDRDIYGKEIEVVFCRFVRDEVKFSSLEELKTQLNIDRQT 298


>gi|290580426|ref|YP_003484818.1| putative macrolide-efflux protein [Streptococcus mutans NN2025]
 gi|254997325|dbj|BAH87926.1| putative macrolide-efflux protein [Streptococcus mutans NN2025]
          Length = 306

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+ ++ +    +  V+ +G FDG+H GH  +  QA +IA      I VL+F   
Sbjct: 1   MEIIK-IDSHKDI-EQQEDSVLVLGYFDGLHRGHKELFNQAREIAQKMQLKIVVLTFPES 58

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P     ++ P  +     + G   L    FT   A  S++ FI+   ++ L
Sbjct: 59  PQLAFTRFEPDLLNHINYPEKRYCKFAEYGVDCLYLTDFTSSFAKISSDDFIKNY-IKAL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K V+ G  ++F   +A +   L+     +    + + E++  + + +SS+ +R  + +
Sbjct: 118 KAKAVVMGFDYKFSHSKA-NSDYLKHH---FVGQVITVPEVQY-EGKKISSTRVRQLIKQ 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G +     LLGY F+    V+HG+  GRT+GFPTAN+  L    L  +GVY +      +
Sbjct: 173 GDMTQVNRLLGYEFSTRGIVVHGDARGRTIGFPTANLAPLDRTYLPADGVY-VADVIVGR 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   + + + +R  +KF  +  L 
Sbjct: 232 KRYRSMTSIGKNITF-GGTELRLEANIFDFDDDIYGETIEIFWLNKIREMVKFNSVNDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 EQLKSDKEIAINW 303


>gi|332977967|gb|EGK14711.1| FAD synthetase [Psychrobacter sp. 1501(2011)]
          Length = 355

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 137/321 (42%), Gaps = 40/321 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSS-----PIFTLS 73
           V+ IGNFDG+HLGH  +L+Q             V+ F P PR                L+
Sbjct: 25  VLTIGNFDGVHLGHQAMLKQLQTSASEQQLATMVMIFEPQPREYFAQLKSDLLAAPARLT 84

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               +  +L + G   ++  KF     + SA QF   + +  L VK+++ G  F+FG DR
Sbjct: 85  SQDEKLALLSEFGIDTVVIAKFDEAFRSLSAAQFADML-IHHLRVKSLVLGDDFKFGHDR 143

Query: 134 AGDRGILQKRGEKYGFHTVFID-------ELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            GD   L+  G          D       E    +   +SS+ IR  L KG +  AAHLL
Sbjct: 144 TGDSKFLRNYGLPVTNLQTITDTQAVAEKEPLTLQDNRISSTRIRELLAKGDLKTAAHLL 203

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT---------- 236
              +TI  +V+ G+KIGRTL FPTAN++L+       GVY +     D            
Sbjct: 204 NRDYTITGEVVGGDKIGRTLDFPTANIELNRIRPALHGVYGVDVVVLDAEGKVIPHAFDN 263

Query: 237 ---------------SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
                          S  G AN G  P++       LE F  +FS  +YG+   V F  +
Sbjct: 264 LANEGKTGIAGLLEYSLFGTANIGVRPSVDKPNDWRLEVFFPEFSGNLYGKTLQVRFLHH 323

Query: 282 LRPEIKFKDIEKLKIYMGEDE 302
           L  E K+  +E LK  + +D 
Sbjct: 324 LHDERKYDGLESLKAGIQQDV 344


>gi|330444476|ref|YP_004377462.1| riboflavin biosynthesis protein RibF [Chlamydophila pecorum E58]
 gi|328807586|gb|AEB41759.1| riboflavin biosynthesis protein RibF [Chlamydophila pecorum E58]
          Length = 308

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 9/304 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           ++EI+  L + +    + +G FDG HLGH  +L             V++F+PHP+ ++  
Sbjct: 10  HMEISYKLASSVPIDSLTVGFFDGCHLGHQKLLSILTSYP--GSSGVITFDPHPQAVLSK 67

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           S     ++    + ++L+K     L    F+LE A+ SAE+F+ ++    L  K +I G 
Sbjct: 68  S--PKLITETPERLELLQKFPIDFLGILPFSLEFASLSAEEFLSEL-HSQLHCKRLILGP 124

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             R GK   G+   LQ  G+  G   V       N    +SS  IR  L+ G +  A   
Sbjct: 125 DSRLGKGGLGNIKTLQPLGKSLGIEIVQAPSFYFNNEV-ISSQKIRKMLSHGDLETAHLY 183

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG  + I   V  G  IG  LGF T N+ +  + LL  GVYA   + +   +Y  V N G
Sbjct: 184 LGRPYAICGTVTAGNGIGSRLGFATLNV-IKEECLLPYGVYACEVKHK-HQTYFAVMNLG 241

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+  +  L LE+ +F+FS  +YG+R T     +LR E KF   E+L   +  D  +A
Sbjct: 242 EAPTVHRDS-LCLEAHLFNFSGNLYGERITFFPKKFLREEKKFASKEELICAIKHDVLQA 300

Query: 306 RKIL 309
           + + 
Sbjct: 301 KTLF 304


>gi|62185077|ref|YP_219862.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila abortus S26/3]
 gi|62148144|emb|CAH63901.1| riboflavin biosynthesis protein [Chlamydophila abortus S26/3]
          Length = 304

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 144/314 (45%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + +++    S+P  +    V IG FDG HLGH  +L             V++F+ HP+
Sbjct: 1   MEICYSL---TSIPQSVDS--VTIGFFDGCHLGHKKLLTVLSSYP--GLSGVITFDLHPQ 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++Q       ++    +  +L+      L    FT   AN SAE FI+ +  + L  K 
Sbjct: 54  AVLQ-FPAPKLITSTKERLLLLQDFPIDYLCILSFTQRFANQSAESFIRSL-HQTLRCKR 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   + GK   G+   LQ      G   + +   + ++ +IVSS  IR  L +G + 
Sbjct: 112 LILGYDSKLGKGGEGNATTLQPLANSLGIEIIEVAPHKIDQ-EIVSSKRIRQFLMQGDLD 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NA   LG+ +     +  G  +G  LG  T N+      LL  GVYA     +  T Y G
Sbjct: 171 NANRHLGHSYKYLGTIEAGYGLGTQLGVATINL-PQEQCLLPYGVYACAIDYR-TTIYQG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + N G+ PT+  N  L LE+ +FDFS  +YG+  +V    ++R E KF   E L   + +
Sbjct: 229 IMNLGKAPTVGRNS-LCLEAHLFDFSGNLYGETVSVIPKKFIRKERKFPSREMLSQAIRK 287

Query: 301 DEKKARKILESSYP 314
           D   A+    ++Y 
Sbjct: 288 DIDSAKAFFSTNYA 301


>gi|261416684|ref|YP_003250367.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373140|gb|ACX75885.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327498|gb|ADL26699.1| riboflavin biosynthesis protein RibF [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 297

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 7/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V +GNFDG HLGH  +    +A+   N+   TV+SF PH   +++       L+    +
Sbjct: 4   AVTMGNFDGCHLGHQALFRTLKAVAEVNHLQPTVISFEPHSNYVLRGPGDPLLLTTTEEK 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + +E +G   L    FT E A    ++F++  L+E  EV ++  G    FG    G+  
Sbjct: 64  REFVESLGIEFL-VLPFTSELAKLPFDKFVRTELIEKREVVSMFFGHDHCFGAGGKGNYE 122

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            +     +    +  +  +  +K + VSSS +R AL  G V  A   LG  + +   V+ 
Sbjct: 123 TITAAFPEL---STQMLSMVLHKGERVSSSAVRNALLNGDVDRAQTYLGRPYRLSGTVVV 179

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+++G T+GFPTAN+Q+     L K GVY    R  D   Y  V N G  PT      L 
Sbjct: 180 GKRLGHTIGFPTANVQMEQYKFLPKGGVYVASARLSDGRIYRSVVNIGTQPTTPGTHNLA 239

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +E+++ DF+++IYGQ   +    +LRPE KF  IE L   +G D   A+  
Sbjct: 240 VEAYLLDFNEDIYGQHLALDLLAFLRPEKKFASIEDLVRQIGMDADTAKNY 290


>gi|322389231|ref|ZP_08062792.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 903]
 gi|321144136|gb|EFX39553.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           ATCC 903]
          Length = 306

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 13/297 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSP--IFTLSPP 75
            V+ +G FDG+HLGH  + ++A +I       + +L+F   P+       P  +  L  P
Sbjct: 18  TVLVLGYFDGLHLGHQELFKKARQIADEKGLKVALLTFPESPKLAFVRYQPELLLHLQSP 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  + FG D+  
Sbjct: 78  EDRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSFGSDKK- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L      +      I  + + + + +SS+ IR A+ +G V  AA LLG+  +    
Sbjct: 136 TASDLAAY---FDGQVEVISPVLD-QGEKISSTRIRQAILEGRVQEAARLLGHPLSSRGI 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+G+PTAN+  +    L  +GVY +    + QT Y G+A+ G+N T     
Sbjct: 192 VVHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQT-YRGMASVGKNITF-DGK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R   E 
Sbjct: 250 ELRFEVNLFDFSGDIYGHTLTIHWLDKIREMVKFDGIDQLVAQLEEDEAVSRNWTED 306


>gi|114777734|ref|ZP_01452694.1| hypothetical protein SPV1_08701 [Mariprofundus ferrooxydans PV-1]
 gi|114551950|gb|EAU54484.1| hypothetical protein SPV1_08701 [Mariprofundus ferrooxydans PV-1]
          Length = 309

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 153/313 (48%), Gaps = 7/313 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M + H+ E   SL   LKGG + +GNFDG+H+GH  +L +     +    P  V++F PH
Sbjct: 1   MQIIHSWEEAASL-AELKGGAITVGNFDGVHMGHEQVLAETRGHAMDVGGPTIVVTFEPH 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR ++        L     + + L++ G  A++  +F    A +SAE+F + +  +    
Sbjct: 60  PRAVLFPGEAPRRLCHVHERLQYLQQAGADAVLLLEFNKAMAAWSAEKFSRMLF-DTFAF 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG DR G    L+K G++ GF            S + S S IR+A+    
Sbjct: 119 RHIHVGYDFAFGHDRQGHVDDLRKLGDEAGFTVSEAAAFAMLGSVVSS-SRIRSAVEAAD 177

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              AA LLG  + I  +V+HG+K GR + FPTAN+ +        G+YA+R     +  +
Sbjct: 178 FTLAASLLGRDYAIAGEVLHGDKRGRQMNFPTANIDVGDLAHPPVGIYAVRAN-NKEKQW 236

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G A  G  PT      LLLE+ + D S ++YGQ   V+F   +R + KF     L   +
Sbjct: 237 LGAAYLGYRPTFN-GRTLLLETHLLDDSPDLYGQCLNVAFVQRIREDRKFTGHADLADQI 295

Query: 299 GEDEKKARKILES 311
             D + AR+IL  
Sbjct: 296 ALDCQAAREILAE 308


>gi|323340005|ref|ZP_08080271.1| riboflavin biosynthesis protein RibF [Lactobacillus ruminis ATCC
           25644]
 gi|323092511|gb|EFZ35117.1| riboflavin biosynthesis protein RibF [Lactobacillus ruminis ATCC
           25644]
          Length = 320

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 12/320 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V    E   +        V+ +G FDG+H GH  ++ +  + A    + + +++ + +
Sbjct: 2   MQVVKLQEPYDNNLIPEGPIVLCLGFFDGVHRGHQAVIREGKRRAEKIGAKLAIMTLDRY 61

Query: 59  PRTIIQSS--SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  +  +        LS    + ++ E+ G        F  +    S + F++K +V  L
Sbjct: 62  PGIVFNNEANKDFAYLSSERKKLELFERFGVDLCYVVSFDEKFYTLSQQDFVEKYIVS-L 120

Query: 117 EVKTVITGTKFRFGK---DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
                + G+ + +GK      GD   L+       F  V +  + ++  + +SS+ IR A
Sbjct: 121 HAVCAVAGSDYTYGKMPYANGGDMSHLEGYANGR-FEVVKVSHMLDD-GEKISSTRIRKA 178

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT 232
           L KG+V  AA LLGY +     V+HG + GR LGFPT N++    + +  EGVYA+  R 
Sbjct: 179 LRKGNVKMAADLLGYSYETSGQVVHGFERGRKLGFPTLNLETKEPVMIPSEGVYAVFVRF 238

Query: 233 QDQ-TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           + +   Y G+A+ GRN T   +    +E  + DFS  +YG+   V + + LR   KF   
Sbjct: 239 EGEEKRYMGMASIGRNETFGNHFEKTIEINLLDFSDMVYGKNVFVEWIELLRGMKKFSGA 298

Query: 292 EKLKIYMGEDEKKARKILES 311
           + L   +  D+++ RKILE 
Sbjct: 299 KDLIEQLNHDKERTRKILEK 318


>gi|313890109|ref|ZP_07823744.1| riboflavin biosynthesis protein RibF [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121470|gb|EFR44574.1| riboflavin biosynthesis protein RibF [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 304

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M++ H I++ + +    +  V+ +G FDG+HLGH  + +  QAI    +  I  L+F   
Sbjct: 1   MNIKH-IKVAEDI-FEPEETVLVLGYFDGLHLGHKALFDKAQAIAQKESLKIVTLTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P   L  + P  + +     G   L    FT   +N +++ FI+   +  L
Sbjct: 59  PKLAFARFEPELLLHIAYPEKRFEKFADYGVDNLYLVDFTTAFSNITSDDFIKNY-IGRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  ++FG +R  +   L++  +   F    I      +++ +SS+ IR  + +
Sbjct: 118 NAKYIVVGFDYKFGHNRT-NSDYLRRNFKGTVFTIEEIS----YENRKISSTWIRELIKE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V     LLGY F+    V+HG+  GRTLGFPTAN+  +    L  +GVY +     + 
Sbjct: 173 GNVAKVNQLLGYEFSTRGMVVHGDARGRTLGFPTANLAPIDRTYLPADGVY-VTDVIVNG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF +EIYG+   + +   +R   KF+ IE L 
Sbjct: 232 QRYRSMTSIGKNVTF-GGTELRLEANIFDFDREIYGESIEIIWLQKIREMTKFEGIEDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 EQLRVDKEIALNW 303


>gi|325677840|ref|ZP_08157482.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 8]
 gi|324110394|gb|EGC04568.1| riboflavin biosynthesis protein RibF [Ruminococcus albus 8]
          Length = 308

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/293 (32%), Positives = 147/293 (50%), Gaps = 6/293 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G V A+G FDG+H GH L++  A+ +A        V +F  +  T       +  +    
Sbjct: 13  GTVCALGLFDGVHRGHRLVINTAVSLAKELGAQSAVFTFKTNTVTSKGHDGRLEMILSDE 72

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +    +G   L    F  E  + SAE F++ +LV  L  + V+ G  FRFGK   GD
Sbjct: 73  EKRRHFGDLGVELLYSPSF-EELKDMSAEAFVRDILVGVLGCRAVVCGDDFRFGKGAEGD 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G  YG   +  D+L   K + VSS+ IR  +  G +  A  +LGY F+++ +V
Sbjct: 132 CSSLELYGRIYGIEVIVCDKLSY-KGEEVSSTMIRECIRTGKIEKANEMLGYIFSLKLEV 190

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG ++GRT  FPT N  +    I+ K GVYA R     +  + GV N G  PT+  +  
Sbjct: 191 EHGRELGRTWNFPTMNQTIPRGQIMPKFGVYATRVTVGGEEKF-GVTNIGVKPTLKAHDA 249

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            L E+FI DF  ++YGQ+  +    ++RPE  F  I++L+  + +D  K R+ 
Sbjct: 250 PLAETFILDFEGDLYGQKIEIMLDKFIRPEKGFDSIDELRAQIAKDTDKVRRF 302


>gi|259503131|ref|ZP_05746033.1| riboflavin biosynthesis protein RibF [Lactobacillus antri DSM
           16041]
 gi|259168997|gb|EEW53492.1| riboflavin biosynthesis protein RibF [Lactobacillus antri DSM
           16041]
          Length = 300

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/296 (30%), Positives = 135/296 (45%), Gaps = 9/296 (3%)

Query: 24  IGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIF-TLSPPSIQEK 80
           +G FDG+H GH  ++  A +I      P+ VL+++  P  +       F  LS    + +
Sbjct: 1   MGFFDGVHRGHQAVIGTAKRIAKQRGLPLAVLTYDHAPGIVYHQYPDGFDYLSTTKRKLE 60

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE++G   +    FT   A+ +   F+    +     + V+ G    +G         L
Sbjct: 61  LLEELGVDLVYLVSFTSAYASLAPADFVADY-LRAFHSQVVVAGFDHTYGTRDVATMERL 119

Query: 141 QKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            K      F  V + +    +     V S  IR  +  G V  A   LGYR+     V+H
Sbjct: 120 PKYAGGQ-FEVVTVPKFTLADQPDVKVGSRQIRQLIATGQVGAANDALGYRYQTSGLVVH 178

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   GRTLGFPTAN+     ++L   GVYA+  +      Y G+A+ G N T      L 
Sbjct: 179 GLARGRTLGFPTANIEAPENELLPGIGVYAVTVQVGGH-WYGGMASVGHNITFGKAAKLT 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           +E ++FDF Q IYG+   V ++ YLR E KF   ++L   M  DE  AR+IL  + 
Sbjct: 238 VEIYLFDFQQMIYGEEVKVRWYQYLRGEEKFAGADELVAQMKHDEANARQILARAQ 293


>gi|291550236|emb|CBL26498.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus torques
           L2-14]
          Length = 303

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/321 (31%), Positives = 154/321 (47%), Gaps = 21/321 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     ++             V +G FDG+H GH  +L + IK     +    V +F+  
Sbjct: 1   MQYIKGLDAFDGRNQ----TAVTLGKFDGLHRGHQKLLNRIIKYAQKEDCDSVVCAFDM- 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                        L     +   LE      LI   FT E     AE+FI+++L + L  
Sbjct: 56  ---------DRDCLMTNEERRAFLED-KVDYLIEIPFTREMMEMEAEKFIEEILYKKLHA 105

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ GT F FG ++ G+  +L+K   KYG+    +++    K + +SS+ IR  L  G+
Sbjct: 106 SHIVVGTDFNFGHEKRGNHQMLEKYAAKYGYTVDVVEK-AYYKDREISSTYIRELLLDGN 164

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTS 237
           V  A  LLGY + I S V HG+++GRTLGFPT N+      IL K GVYA R    D   
Sbjct: 165 VPLANELLGYPYEITSVVEHGQQLGRTLGFPTMNLAPQEKKILPKYGVYACRVLV-DGVW 223

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y GV N G  PT+      L E +++ +  + YG+  TV   ++ RPE KF  +E+LK  
Sbjct: 224 YGGVGNAGVKPTVAQEKRRLFEVYVYGYEGDAYGKTATVQILEFERPETKFHSVEELKDR 283

Query: 298 MGEDEKKARKILESSYPLSER 318
           + +D +   + L+ ++P  ER
Sbjct: 284 VMKDMRYGEEYLK-NHPFDER 303


>gi|291460006|ref|ZP_06599396.1| tRNA pseudouridine synthase B [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417347|gb|EFE91066.1| tRNA pseudouridine synthase B [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 536

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 11/303 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V++ G FDG HLGH LI ++ ++I+    +   +L+F+  P   +        +S    
Sbjct: 232 TVLSFGKFDGGHLGHQLIFDKILEISREKKLRSVLLTFSRSPEGKLLGEKR-DRISTEEE 290

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
               L   GF  +     T    + S E FI+ +L   + VK ++ G    FGK   GD 
Sbjct: 291 HLSRLRSRGFDRVFELPLTEAFLDMSPEAFIEGILHRQMHVKELVVGEDASFGKGARGDV 350

Query: 138 GILQKRGEKYGFHTVFIDELRNNKS----QIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            +L++  E +G+    + +          Q++SSS IR  L+ G V     LLG  F++ 
Sbjct: 351 ALLRRYAEAFGYTVHALKKRETADEGGELQVISSSLIRKELSLGRVSRVRELLGRYFSLS 410

Query: 194 SDVIHGEKIGRTLG-FPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
             V+HG++IG TL  FPTAN++ SP  ++   GVY +R    DQ+ Y+G+ N G NPT+ 
Sbjct: 411 GTVVHGKRIGGTLLHFPTANLKPSPGKLIPAFGVYIVR-VLSDQSFYAGICNVGNNPTVS 469

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              P+ +ESF+  F  ++YG++  + F + LRPE++F  + +L   +  D+++A +    
Sbjct: 470 AENPVSIESFLLHFQGDLYGKKIRIDFIERLRPELRFSSLSELSEQLERDKEEA-ECFRE 528

Query: 312 SYP 314
            +P
Sbjct: 529 KHP 531


>gi|325265387|ref|ZP_08132111.1| riboflavin biosynthesis protein RibF [Clostridium sp. D5]
 gi|324029388|gb|EGB90679.1| riboflavin biosynthesis protein RibF [Clostridium sp. D5]
          Length = 303

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 20/312 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M  + +I   Q      +   + +G FD +H GH  ++ +             V +F+  
Sbjct: 1   MQYYTDINSYQG----TESTAITLGKFDSLHRGHQKLISRVRDSAEKEKLKSIVFAFDM- 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                       TL     + + L++     +I   FT E     AE FI++VLV  L  
Sbjct: 56  ---------KRDTLLTNRERRQHLKQQ-VDCMIECPFTKEIREMEAETFIEEVLVNTLHA 105

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ GT F FG  + GD G+L +  EKY +    +++   N  + +SS+ +R AL  G 
Sbjct: 106 SHIVVGTDFGFGHGKRGDAGMLAEYAEKYNYQLDVVEKELYN-GREISSTYVREALEAGD 164

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           V  A  LLGY + +   V HG ++GRTLGFPT N+  +   I+ + GVY    +  D  +
Sbjct: 165 VKLANQLLGYPYHMSGLVEHGRRLGRTLGFPTMNITPAERKIVPRFGVYTCGIQV-DGVN 223

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y G+ N G  PT+     LL E F+F F  + YG+   V F  ++RPE KF  +E+LK  
Sbjct: 224 YHGIGNVGIKPTVTDEPRLLTEVFVFGFKGDAYGKEIRVKFCSFVRPETKFCSVEELKKQ 283

Query: 298 MGEDEKKARKIL 309
           +  D +  ++  
Sbjct: 284 VDRDIESGKEYF 295


>gi|309804433|ref|ZP_07698501.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           09V1-c]
 gi|309809700|ref|ZP_07703555.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           2503V10-D]
 gi|308166246|gb|EFO68461.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           09V1-c]
 gi|308169980|gb|EFO72018.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           2503V10-D]
          Length = 309

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+   F   T       FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K   + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFNNNKK 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IYG++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 254 -TIETYIFDFCEDIYGEKIILYWYEFIRDNIKFNDINSLINQLNIDKTNIQRYFDKK 309


>gi|332638623|ref|ZP_08417486.1| FAD synthase [Weissella cibaria KACC 11862]
          Length = 313

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPH 58
           M V        +     +  V+A+G FDG+H GH  ++ +A   A   +  + VL+++ H
Sbjct: 1   MEVITLHHPFDAATIADEPVVLAMGFFDGVHAGHRAVINRAKAEATARSVKLAVLTYDQH 60

Query: 59  PRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +      P+  L+    +  +L +MG        FT   A  +   F+++ ++  L 
Sbjct: 61  ASVVFTAHQHPLTYLTTLPRKLTLLAEMGVDVAYVVNFTSALAKLAPADFVEQYMI-GLR 119

Query: 118 VKTVITGTKFRFGK-DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              V+ G    +G  D   D   L        F  + +  + +   +  +S+  R  +  
Sbjct: 120 ATAVVAGFDHTYGASDAQADMSHLPGYAAGR-FDVIEVSRV-DVDGEESASTRARQLVDA 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQ 235
           G V     LL   +     V+HGE  GR +G+PTAN++ +P + L   GVY +       
Sbjct: 178 GQVDALNELLTQPYQTSGVVVHGEARGREMGYPTANIETTPGERLPGVGVYVVELEIAG- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G N T   N P  +E  +FDF+QEIYG+R  V +  Y+R E KF  ++ L 
Sbjct: 237 KWYGGMASIGYNVTFGENRPKTVEINLFDFAQEIYGERVNVRWHHYIRGEEKFTGMDALI 296

Query: 296 IYMGEDEKKARKILES 311
             + EDE  +R+ L  
Sbjct: 297 AKLQEDESVSRRFLAE 312


>gi|197303051|ref|ZP_03168099.1| hypothetical protein RUMLAC_01778 [Ruminococcus lactaris ATCC
           29176]
 gi|197297906|gb|EDY32458.1| hypothetical protein RUMLAC_01778 [Ruminococcus lactaris ATCC
           29176]
          Length = 302

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS-FNPHP 59
           M     I+  +      K   V +G FDG+H GH  ++E+    A N  ++V+  F+   
Sbjct: 1   MQYIKGIDAFR----EGKRTAVTLGKFDGLHRGHQKLIEKICSYAGNDCVSVVCAFDMQ- 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                       L     ++K+L+      LI Y FT +     AE+FIQK+L E L   
Sbjct: 56  ---------RNCLMTKEERKKLLDG-KVDYLIDYPFTGDLMTMEAERFIQKILYEKLHAA 105

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G+ F FG  + GD  +L++  +KY +    +++ R    + +SS+ +R AL+ G++
Sbjct: 106 HIVVGSDFSFGYRKRGDHQMLERYAQKYDYTVDVVEKARLGDRE-ISSTYVREALSHGNI 164

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSY 238
             A  LLGY + +   V HG ++GRTLGFPT N+      IL + GVYA R    D   Y
Sbjct: 165 RLAQELLGYPYEMTGIVEHGRELGRTLGFPTMNVAPQDGKILPRYGVYACRVLI-DGKWY 223

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            GV N G  PT+      L E +++D+  + YG+  T+ F ++ RPE +F  +++L+  +
Sbjct: 224 GGVGNAGVKPTVTQEQRELFEVYVYDYEGDAYGKYITIRFLEFERPETRFDSVKELRACV 283

Query: 299 GEDEKKARKILESSYPLSE 317
            +D +   +     +PL +
Sbjct: 284 MQDMRYGEEYFRE-HPLKK 301


>gi|312867703|ref|ZP_07727909.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           F0405]
 gi|311096766|gb|EFQ55004.1| riboflavin biosynthesis protein RibF [Streptococcus parasanguinis
           F0405]
          Length = 306

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/294 (29%), Positives = 149/294 (50%), Gaps = 13/294 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSP--IFTLSPP 75
            V+ +G FDG+HLGH  + ++A +I       + +L+F   P+       P  +  L  P
Sbjct: 18  TVLVLGYFDGLHLGHQELFKKARQIADEKGLKVALLTFPESPKLAFVRYQPELLLHLQSP 77

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L ++G   L    FT + A+ +A++F+ +  V+ L  + +I G  +  G D+  
Sbjct: 78  EDRFQKLNELGVDELFLIDFTTDFASKTAKEFVDQ-FVKALRARVLIAGFDYSLGSDKK- 135

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L      +      I  + + + + +SS+ IR A+ +G V  AA LLG+  +    
Sbjct: 136 TASDLAAY---FDGQVEVISPVLD-QGEKISSTRIRQAILEGRVQEAARLLGHPLSSRGI 191

Query: 196 VIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG+  GRT+G+PTAN+  +    L  +GVY +    + QT Y G+A+ G+N T     
Sbjct: 192 VVHGDARGRTIGYPTANLAPIDRTYLPSDGVYVVDVDFKGQT-YRGMASVGKNVTF-DGK 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            L  E  +FDFS +IYG   T+ + D +R  +KF  I++L   + EDE  +R  
Sbjct: 250 ELRFEVNLFDFSGDIYGHTLTIRWLDKIREMVKFDGIDQLVAQLEEDEAVSRNW 303


>gi|313892640|ref|ZP_07826227.1| riboflavin biosynthesis protein RibF [Dialister microaerophilus
           UPII 345-E]
 gi|313119037|gb|EFR42242.1| riboflavin biosynthesis protein RibF [Dialister microaerophilus
           UPII 345-E]
          Length = 312

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 14/316 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + H++E      N  +  V AIG FDGIH GH  IL Q  K+A        +++F PH
Sbjct: 1   MKIIHSLEEM----NIKEPIVFAIGFFDGIHKGHQEILNQTKKLAAKKSAKSGIITFYPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++I   +P+  L   + + +IL+K     +I  K  +E  + S E+F+ K+  ++  +
Sbjct: 57  PLSVIFPENPVKLLLTQTEKYEILKKYNLDIIIEIKPDIEFLHQSHEEFLNKL-KKFSNL 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTK 176
           K +I G  F FG   +G+   ++K   K       I+ ++N    + ++SS+NIR  +  
Sbjct: 116 KGIIVGENFTFGYKGSGNAETMKKFF-KNEVEVKKINLIKNTLADNTVISSTNIRKFIAD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLS-PDILLKEGVYAIRFRTQD 234
           G++  A   LG  + I   ++HG K G  L G PTAN++     +L  +GVYA     + 
Sbjct: 175 GNMREAMKFLGRPYFIADKIVHGFKRGSELLGIPTANLEYGFERMLPSDGVYATYIEVKG 234

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +  + N G NPT   +    +E+FI DF +EIYGQ   + + + +R EIKF+  + L
Sbjct: 235 NK-HPSITNIGTNPTFN-DKERTIETFILDFDEEIYGQTVKLEWIEKIRDEIKFEKYQDL 292

Query: 295 KIYMGEDEKKARKILE 310
            + + +D KKA +IL+
Sbjct: 293 ILQIKKDIKKAEEILK 308


>gi|153855231|ref|ZP_01996397.1| hypothetical protein DORLON_02411 [Dorea longicatena DSM 13814]
 gi|149752230|gb|EDM62161.1| hypothetical protein DORLON_02411 [Dorea longicatena DSM 13814]
          Length = 307

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 7/298 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTL 72
           N      V  G FDG+H GH +++ +  ++    N    V SF+  P    +       L
Sbjct: 11  NGNGRAAVTFGKFDGLHRGHQMLVTKVRELGKQENINSIVCSFDMRPLW-KEKGIAPELL 69

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                +++ ++      LI   FT      SAE FIQ+++ +    K ++ GT F FG +
Sbjct: 70  MVGEERQERVKDE-VDYLIECPFTESFRQKSAEDFIQEIIHDLFRAKYIVVGTDFTFGCE 128

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           + GD  +L +  ++Y +  + I++ R +  +I+SS+ ++  + +G V  A  LLGY F +
Sbjct: 129 KRGDVHMLAEYADQYDYELIVIEKERYHD-RIISSTYVKEVVKEGDVGLAETLLGYPFEV 187

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           E  V HG ++GRTLGFPT N+      I+   GVY  +   + +T Y G+AN G  PT+ 
Sbjct: 188 EGTVEHGRQLGRTLGFPTLNVAWPEGKIVPAHGVYFCKIDIEGKT-YPGIANVGIKPTVT 246

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
               LL+E+F+F +S   YG++  ++   + RPE KF  I+ LK  + +D  K  +  
Sbjct: 247 EEKKLLIEAFLFGYSGNAYGEKVRINLKKFRRPEQKFDGIDALKRQIDKDIAKGMEYF 304


>gi|289570965|ref|ZP_06451192.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T17]
 gi|289544719|gb|EFD48367.1| bifunctional FAD synthetase/riboflavin biosynthesis protein ribF
           [Mycobacterium tuberculosis T17]
          Length = 318

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 21/303 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M  +        +P      V+ IG FDG+H GH  ++  A+K   A   P  +++F+PH
Sbjct: 1   MQRWRG---QDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   S    L+  + + ++++ +G    +   FT +    + ++FI ++LVE L V
Sbjct: 58  PMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF---IDELRNNKSQIVSSSNIRTALT 175
             V+ G  F FGK  AG+   L++ GE++GF       + E  +N++   SS+ IR+ + 
Sbjct: 118 VEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVD 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQD 234
            G ++ A   LG    +E  V+ GE  G  LGFPTAN+       +  +GVYA  F    
Sbjct: 178 AGDMVAAMEALGRPHRVEGVVVRGEGRGAALGFPTANVAPPMYSAIPADGVYAAWFTVLG 237

Query: 235 Q----------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD-YLR 283
                        Y    + G NPT        +E+F+ D + ++YGQ   +     Y R
Sbjct: 238 HGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEAFVLDTTADLYGQHVALGLRRAYPR 296

Query: 284 PEI 286
           PE 
Sbjct: 297 PEE 299


>gi|307776578|pdb|3OP1|A Chain A, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
 gi|307776579|pdb|3OP1|B Chain B, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
 gi|307776580|pdb|3OP1|C Chain C, Crystal Structure Of Macrolide-Efflux Protein Sp_1110 From
           Streptococcus Pneumoniae
          Length = 308

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 13/294 (4%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSP--IFTLSPP 75
            VV +G FDGIH GH  +   A K A     PI V +FN  P+  ++   P     +  P
Sbjct: 22  SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVXTFNESPKIALEPYHPDLFLHILNP 81

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + +E+ L++ G   L    F+ + A+ +A++F     ++    K ++ G  + FG D+  
Sbjct: 82  AERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAXNAKIIVAGFDYTFGSDKK- 139

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+     +    + +  + + K + +SS+ IR A+  G+V  A  LLG        
Sbjct: 140 TAEDLKNY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILDGNVKEAGKLLGAPLPSRGX 195

Query: 196 VIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+HG   GRT+G+PTAN+  L       +GVY +    Q +  Y   A+ G+N T     
Sbjct: 196 VVHGNARGRTIGYPTANLVLLDRTYXPADGVYVVDVEIQ-RQKYRAXASVGKNVTF-DGE 253

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
               E  IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R  
Sbjct: 254 EARFEVNIFDFNQDIYGETVXVYWLDRIRDXTKFDSVDQLVDQLKADEEVTRNW 307


>gi|254796438|ref|YP_003081274.1| riboflavin biosynthesis protein RibF [Neorickettsia risticii str.
           Illinois]
 gi|254589675|gb|ACT69037.1| riboflavin biosynthesis protein RibF [Neorickettsia risticii str.
           Illinois]
          Length = 303

 Score =  265 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 13/308 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V++  E+   LP+     VV  GNFDG+HLGH  +L     ++    +   V++F+PH
Sbjct: 1   MRVYNTPEL---LPH---PSVVTFGNFDGVHLGHLALLSALSSVSKLDALHRVVITFDPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++S    F ++    +  +L      +L   KF  +    S E+F++ +   +L +
Sbjct: 55  PFCFLKSKKD-FLITDQYTKSVLLSPY-VDSLYFIKFDDDLRGLSPEEFLKFLS-SFLNL 111

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++     RFGK  +G    ++K  E   +  V I    N+     SS+ +R ++  G 
Sbjct: 112 KYLVNAENCRFGKFSSGSITEIEKYQELLSYEAVVIKPELNDSGNRYSSTLVRASIKNGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           +L+A  LLG   +I   +     +  T+GFPT N+ +  +I+  K GVY +    +  T 
Sbjct: 172 MLSARRLLGRYHSIRGIIRRDRGLASTIGFPTINIAIPEEIIKPKLGVYVVDVSIEG-TV 230

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           YSG+AN G+ PT   +G ++LE  IF+FS  +YG+  TV    +LR E  F  +E+LK  
Sbjct: 231 YSGIANIGKRPTTSDSGDVILEVHIFNFSDNVYGKDATVYLKAFLREEKHFPSVERLKEQ 290

Query: 298 MGEDEKKA 305
           +  D   A
Sbjct: 291 ILADIHTA 298


>gi|312873344|ref|ZP_07733397.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2052A-d]
 gi|325912542|ref|ZP_08174929.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           60-B]
 gi|311091134|gb|EFQ49525.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2052A-d]
 gi|325478151|gb|EGC81276.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           60-B]
          Length = 309

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKKFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+   F   T       FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K   + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFNNNKK 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 254 -TIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSLIKQLNIDKTNIQRYFDKK 309


>gi|329919850|ref|ZP_08276788.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           1401G]
 gi|328936940|gb|EGG33370.1| riboflavin biosynthesis protein RibF [Lactobacillus iners SPIN
           1401G]
          Length = 309

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKKFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+   F   T       FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMTFNESTCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K   + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGVKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFNNNKK 253

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 254 -TIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSLIKQLNIDKTNIQRYFDKK 309


>gi|325912468|ref|ZP_08174861.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           143-D]
 gi|325475715|gb|EGC78888.1| riboflavin biosynthesis protein RibF [Lactobacillus iners UPII
           143-D]
          Length = 309

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IHTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ + S  IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINSKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFN-NSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSLIKQLNIDKTNIQRYFDKK 309


>gi|75764627|ref|ZP_00744067.1| Riboflavin kinase / FMN adenylyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74487884|gb|EAO51660.1| Riboflavin kinase  / FMN adenylyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 269

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 7/266 (2%)

Query: 53  LSFNPHPRTII-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
           ++F+PHP  ++ +  + +  ++P   +EKI+E +G   L   KF    A    +QF+   
Sbjct: 1   MTFHPHPSGVLGKKDAHVEYITPMRDKEKIVESLGIDILYVIKFDESFAGLLPQQFVDDY 60

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           ++  L VK V+ G  + +G+   G    L          TV   E    + + VSS+ +R
Sbjct: 61  II-GLNVKHVVAGFDYSYGRLGKGKMETLPFHARGEFTQTVI--EKVEFQEEKVSSTALR 117

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRF 230
             +  G +     +LG  +T+   VIHG+K GR +GFPTAN+ LS + LL   GVYA+R 
Sbjct: 118 KLIRNGEMEQIPSILGRAYTVAGTVIHGDKRGRQIGFPTANVGLSDEYLLPPVGVYAVRL 177

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           +  D   Y GV N G  PT   +   L +E  +F+F+++IY Q  TV +   +R E KF 
Sbjct: 178 KVHD-EWYDGVCNIGYKPTFKEDERQLSIEVHLFEFNKDIYDQNVTVEWHMRIREEKKFN 236

Query: 290 DIEKLKIYMGEDEKKARKILESSYPL 315
            I++L   + +D+K A++   S   +
Sbjct: 237 GIDELVEQIAKDKKTAQEYFASEKNI 262


>gi|322385465|ref|ZP_08059109.1| riboflavin biosynthesis protein RibF [Streptococcus cristatus ATCC
           51100]
 gi|321270203|gb|EFX53119.1| riboflavin biosynthesis protein RibF [Streptococcus cristatus ATCC
           51100]
          Length = 308

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I     + N  +  V+ +G FDG+H GH  + ++A KI       I VL+F   
Sbjct: 2   MKI-RRINNELEI-NQEEDTVLVLGYFDGLHKGHQTLFKEARKIAAEQGLKIAVLTFPES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P  +  L+ P  +   LE +G   L    FT   +  +A +F  K  V  L
Sbjct: 60  PKLAFVRYQPELMLHLNHPEERAAHLENLGVDYLYLIDFTSHFSKNTAREFFDKY-VSAL 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K V+ G  + FG D+       ++  + +    V +  + N   + +SS+ IR  +  
Sbjct: 119 KAKAVVAGFDYHFGSDKRKA----EELADYFDGRIVIVSSV-NQDDEKISSTRIRETIQN 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY  +    V+HG   GRT+G+PTAN+  L   IL  +GVY +       
Sbjct: 174 GDVAKAHQLLGYPLSTRGIVVHGNARGRTIGYPTANLAPLDRVILPADGVYVVDVEHNG- 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G+A+ G+N T   +  L  E+ +FDF++EIYG    + + D +R  +KF  IE+L 
Sbjct: 233 KIFRGMASVGKNVTFEGD-ELRFEANLFDFAEEIYGDTIRIIWLDKIRDMVKFDGIEELV 291

Query: 296 IYMGEDEKKARKI 308
             +  DE+ AR  
Sbjct: 292 TQLKSDEEVARNW 304


>gi|309804406|ref|ZP_07698480.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           11V1-d]
 gi|309807188|ref|ZP_07701162.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           03V1-b]
 gi|312871844|ref|ZP_07731929.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           3008A-a]
 gi|312872027|ref|ZP_07732105.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2062A-h1]
 gi|312875708|ref|ZP_07735705.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2053A-b]
 gi|315653439|ref|ZP_07906361.1| riboflavin biosynthesis protein RibF [Lactobacillus iners ATCC
           55195]
 gi|308163521|gb|EFO65794.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           11V1-d]
 gi|308166409|gb|EFO68614.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           03V1-b]
 gi|311088773|gb|EFQ47220.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2053A-b]
 gi|311092440|gb|EFQ50806.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092625|gb|EFQ50984.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LEAF
           3008A-a]
 gi|315489364|gb|EFU79004.1| riboflavin biosynthesis protein RibF [Lactobacillus iners ATCC
           55195]
          Length = 309

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPQKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPYNGVYATQTLIKG-KLYNSMTSVGYNDTFN-NSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRDNIKFNDINSLINQLNIDKTNIQRYFDKK 309


>gi|260654729|ref|ZP_05860217.1| riboflavin biosynthesis protein RibF [Jonquetella anthropi E3_33
           E1]
 gi|260630444|gb|EEX48638.1| riboflavin biosynthesis protein RibF [Jonquetella anthropi E3_33
           E1]
          Length = 303

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 7/295 (2%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            IG FDG H GH  +   A K++     P  V++F P PRT++  +  +  L   +   K
Sbjct: 4   VIGAFDGYHRGHQALFAAASKMSQQLEKPWRVVTFQPRPRTVLAGAETV--LFTDAEMTK 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +    G    ++  F     +   E F++++ +  + +  V+ G  FRFG  R+G    L
Sbjct: 62  LDRWFGLLEPVKLSFDERLRSLPPEAFLEEL-LRSVHLDGVVVGQDFRFGYRRSGGEAEL 120

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +    +      +  +++ + Q VSS+ +R  +  G V  A  LLGY +     V +G+
Sbjct: 121 SRWCSAHRVWLDIVPSVQDPEGQTVSSTRLRKIVASGDVTGARRLLGYGWFASGTVENGQ 180

Query: 201 KIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             G+TLGFPTANM L    L   +GVYA          Y+   + G NPT        +E
Sbjct: 181 GRGKTLGFPTANMSLPGTKLRPADGVYAGAALVDGHA-YAAAISVGINPTFGDVTERRVE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           +F+ D   ++Y +   + F   LRP I+F++ ++L + +G D  ++R++    +P
Sbjct: 240 AFLLDMEGDLYRRPVDLFFLQRLRPMIRFQNSDELSLQIGRDADRSRELFARLWP 294


>gi|329769821|ref|ZP_08261222.1| riboflavin biosynthesis protein RibF [Gemella sanguinis M325]
 gi|328838183|gb|EGF87801.1| riboflavin biosynthesis protein RibF [Gemella sanguinis M325]
          Length = 305

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 81/303 (26%), Positives = 158/303 (52%), Gaps = 13/303 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT-VLSFNPHP 59
           M +F+  +IN+ +    K  + A+G FDG+H  H  I++ AI  + N  ++ V++F+  P
Sbjct: 1   MRIFNISKINE-IEKDSKRRIAALGFFDGLHTAHQEIIKGAIDKSQNDALSIVITFDKSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     ++    ++P + + ++LE++G   +   +F  +    SAE FI ++ ++ L V+
Sbjct: 60  KEYFGKTTEEA-ITPINKKSELLEELGVDEVYYLEFNEKLQTLSAEDFINEI-LKKLNVE 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  +RFG    G   +++      G     +++   N  + +S++ ++ A+ +G+ 
Sbjct: 118 KVFCGYDYRFGNKGIGTPQLIKDS----GIEVDILEKKELNDGK-ISTTALKKAVQEGNF 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE--GVYAIRFRTQDQTS 237
               +L    ++I   V+ G ++GRT+ FPTAN++L    LL +  GVY  + + +    
Sbjct: 173 TEYYNLSNRYYSITGIVVKGRQLGRTINFPTANLKLDEKYLLPDTNGVYITKTKVKG-KV 231

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  + N G NPT+        +E+ I DF ++IY ++  V F+++LR E KF+    LK 
Sbjct: 232 YKSITNIGYNPTVSDGKDKKFIETHILDFDEDIYDEKIEVFFYEFLRKEQKFESFNHLKE 291

Query: 297 YMG 299
            + 
Sbjct: 292 QLQ 294


>gi|213022084|ref|ZP_03336531.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 239

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 2/235 (0%)

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +   L + G   ++  KF    A  +A+ FI ++LVE L V+ +  G  FRFG  RA
Sbjct: 1   MREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGVQFLAVGDDFRFGASRA 60

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           GD  +LQK G +YGF               +SS+ +R AL + ++  A  LLG+ FTI  
Sbjct: 61  GDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQALAEDNLALAESLLGHPFTISG 119

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            V+HG+++GRT+GFPTAN+ L   +   +GVYA+           GVAN G  PT+    
Sbjct: 120 RVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV- 178

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              LE  + D   ++YG+   V     +R E +F  +++LK  +  DE  ARK  
Sbjct: 179 RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARKFF 233


>gi|46446392|ref|YP_007757.1| putative riboflavin kinase/FMN adenylyltransferase [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400033|emb|CAF23482.1| putative riboflavin kinase/FMN adenylyltransferase [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 313

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/311 (31%), Positives = 163/311 (52%), Gaps = 12/311 (3%)

Query: 1   MHVFHNIE--INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFN 56
           M ++  +E   ++ +P      ++ IGNFDG+HLGH  +L++   IA  S   ITVL+F+
Sbjct: 1   MKLYSKLEEVFDKKIPQ-----ILTIGNFDGVHLGHLFVLQRVQAIAKQSDAEITVLTFS 55

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            HP  +++   P   L     + K+LE    + L    FT   A +SA  F++++  +++
Sbjct: 56  NHPSEVLRPQDPAKLLCTLPHKIKLLESNHVNHLFLIPFTNYLAKHSAASFVERIR-QFI 114

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               +I G     G+DR G+R ++Q   E +GF   ++DE R  +   VSS++IR  + +
Sbjct: 115 PFSHLILGHDATLGRDRQGNRLVMQTLAEMWGFEVHYLDEYRY-EGLAVSSTSIRKLVQE 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +     LLG  ++I S +  G   GR +G+PTAN+++    L   GVYA+  + + Q 
Sbjct: 174 GDLKKVHALLGRPYSIYSTISSGLGKGRQMGYPTANIEVQNLCLPPFGVYAVEIK-KGQE 232

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              G+AN G  PT+  N   LLE  I     E       V F  Y+RPE KF++IE+L+ 
Sbjct: 233 ILPGIANLGFAPTIRQNNIPLLEVHILTGQTEFSEDPIEVIFQHYIRPEKKFENIEQLRS 292

Query: 297 YMGEDEKKARK 307
            + +D +  + 
Sbjct: 293 QIRQDIELVKA 303


>gi|55821029|ref|YP_139471.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus LMG 18311]
 gi|55822948|ref|YP_141389.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus CNRZ1066]
 gi|55737014|gb|AAV60656.1| riboflavin kinase / FMN adenylyltransferase [Streptococcus
           thermophilus LMG 18311]
 gi|55738933|gb|AAV62574.1| riboflavin kinase / FMN adenylyltransferase [Streptococcus
           thermophilus CNRZ1066]
          Length = 303

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 158/313 (50%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V   I   + + +  K  V+ +G FD +H GH ++ ++A +I       + V +FN  
Sbjct: 1   MKVT-PINDYKDI-HQDKETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVFTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + +  G   L    F  + A  S++ FI +  +  L
Sbjct: 59  PQLTFQRYTDDLLLHITAPQRRCDLFKAYGTDQLYLTDFNSDFARTSSDDFITRY-INRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + ++ G  ++FG  R  D   L    ++    TV + E + +  + +SS+ +R  + +
Sbjct: 118 KAQEIVVGFDYKFGHHRT-DTDYL----DRNFSGTVHVIEEQQSGGEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +   IL  +GVY +     D 
Sbjct: 173 GNVKEANNLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTILPADGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K A K+
Sbjct: 291 DQLKADKKIAEKL 303


>gi|332523748|ref|ZP_08400000.1| riboflavin biosynthesis protein RibF [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315012|gb|EGJ27997.1| riboflavin biosynthesis protein RibF [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 304

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 148/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M++ H I+  + +    +  V+ +G FDG+H GH  + +  QAI    +  +   +F   
Sbjct: 1   MNIKH-IKFAEDI-FEPEETVLVLGYFDGLHRGHKALFDRAQAIAAKESLKVVTFTFTES 58

Query: 59  PRTIIQSSSPIFTLS--PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+       P   L    P  + +   + G  +L    FT   +  +++ FI++  +  L
Sbjct: 59  PKLAFARFEPELLLHIVYPDKRYEKFAEYGVDSLYLVDFTTAFSKITSDDFIKEY-IGRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K +I G  ++FG +R  +   LQ+        TV   E  + + + +SS+ IR  + K
Sbjct: 118 NAKHIIVGFDYKFGHNRT-NSDYLQRNFA----GTVHTIEEISYEDRKISSTWIRELIKK 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V     LLGY F+    V+HG+  GRTLGFPTAN+  +    L  +GVY        Q
Sbjct: 173 GDVAKVNQLLGYEFSTRGMVVHGDARGRTLGFPTANLAPIDRTYLPADGVYVTDVMVNGQ 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF +EIYG+   + + + +R   KF+ IE L 
Sbjct: 233 -RYRSMTSIGKNITF-GGTELRLEANIFDFDREIYGESIEIIWLEKIREMTKFEGIEDLV 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 EQLKVDKEIALNW 303


>gi|118586589|ref|ZP_01544030.1| riboflavin biosynthesis FAD synthase [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432968|gb|EAV39693.1| riboflavin biosynthesis FAD synthase [Oenococcus oeni ATCC
           BAA-1163]
          Length = 324

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 13/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  N++         K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  
Sbjct: 1   MKII-NLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQS 59

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P     +   +   + P   + ++LEK+G   +    + L   + S E ++    +  L 
Sbjct: 60  PAGFYVNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLAFGSQSPEDYVDNY-LAKLG 118

Query: 118 VKTVITGTKFRFGK-DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              V+ G    +G      D   L +      F    + E  +   + +SS+ IR  L++
Sbjct: 119 ASVVVAGFDHTYGSLKDKADMKHLPRYANGR-FEVYTVGECSDYFGK-ISSTRIRRLLSE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT--- 232
           G +     LLGY+F     V+HG +IGR +GFPTAN  L    +L K GVYA+R +    
Sbjct: 177 GDLQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTG 236

Query: 233 -QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + 
Sbjct: 237 PLAGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANA 296

Query: 292 EKLKIYMGEDEKKARKILES 311
           E L   + +D   +  +L+ 
Sbjct: 297 EALIDQLKQDRIDSLDLLKE 316


>gi|228477502|ref|ZP_04062138.1| riboflavin biosynthesis protein RibF [Streptococcus salivarius
           SK126]
 gi|228250937|gb|EEK10125.1| riboflavin biosynthesis protein RibF [Streptococcus salivarius
           SK126]
          Length = 303

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V  +I   + + +  K  V+ +G FD +H GH ++ ++A +I       + VL+FN  
Sbjct: 1   MKVT-SINDYKDI-HQEKETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + E  G   L    F  + A  S++ FI +  ++ L
Sbjct: 59  PQLTFQRYTDDLLLHITAPKRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIARY-IKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  ++FG  R  D   L      +  +   I+E +++  + +SS+ +R  + +
Sbjct: 118 KAQEVVVGFDYKFGHHRT-DADYLA---RNFSGNVHVIEEQQSD-GEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLG+ F+    V+HG+  GRT+GFPTAN+  +    L  +GVY +     D 
Sbjct: 173 GKVKEANKLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTFLPADGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K A K 
Sbjct: 291 AQLEADKKIAEKF 303


>gi|225870411|ref|YP_002746358.1| riboflavin biosynthesis protein [Streptococcus equi subsp. equi
           4047]
 gi|225699815|emb|CAW93644.1| putative riboflavin biosynthesis protein [Streptococcus equi subsp.
           equi 4047]
          Length = 310

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M + H I+  Q + +     V+ +G FDG+H GH  + ++A +I+      I  L+F+  
Sbjct: 1   MDIQH-IKSYQEI-DESADTVLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHES 58

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP F   ++ P  + +   + G   L    FT   +  S++ FI    +  L
Sbjct: 59  PQLAFTRFSPDFLRHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHY-IGRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            V+ ++ G  + FG D A D   L KR +        I E++ ++   +SS+ IR+ +T 
Sbjct: 118 RVRHIVVGFDYHFGCDHA-DSHYLAKRIKG---TVYSISEVKEDQ-IKISSTRIRSLITA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY      +  
Sbjct: 173 GDVAKANQLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVRG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF+++IYG+   + + D +R   KF D+    
Sbjct: 232 KRYRSMTSIGKNITF-GGKELRLEANIFDFNEDIYGETLEIIWLDRIREMNKFSDVSTFI 290

Query: 296 IYMGEDEKKARKI 308
             + +D++ A   
Sbjct: 291 SQLKQDKEAAINW 303


>gi|315606763|ref|ZP_07881773.1| riboflavin biosynthesis protein RibF [Prevotella buccae ATCC 33574]
 gi|315251618|gb|EFU31597.1| riboflavin biosynthesis protein RibF [Prevotella buccae ATCC 33574]
          Length = 315

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 147/313 (46%), Gaps = 8/313 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
             I+I + +   +   V  IG FDG+H GH  ++ + I  A       TV++F+ HPR +
Sbjct: 2   KTIQITKDM-EPMNPCVATIGFFDGVHRGHQYLIRKLIADARAEGMESTVITFDLHPRKV 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +QS      LS  S +  +L K          F  E A  +A +F++++L + L V+ + 
Sbjct: 61  LQSDYQPRMLSTLSEKLLLLSKTSVDNTALLHFDEEMARMTAREFMEQILRDKLNVRKLY 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G   RFG DR        + G + G   V       N   + S S +R+ L  G V  A
Sbjct: 121 IGYDHRFGHDRKEGFDDYVRYGRELGMEVVLSQAFELNGVNVSS-SVVRSFLEAGEVEMA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS- 239
              LGY +TI   V+ G + GR +GFPTAN+  +    ++   GVYA++ R ++      
Sbjct: 180 EMCLGYPYTIVGKVVKGYQEGRKMGFPTANLDTTGFDKLIPAPGVYAVKARLENSMEMKR 239

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G  PT        LE++I +F ++IYG+   VSF   +R E +F   E L+  + 
Sbjct: 240 AMMNIGVRPTF-GGTETTLETYILNFGEDIYGKMMLVSFAHRIREEQRFPSAEALREQLE 298

Query: 300 EDEKKARKILESS 312
            DEK   +  E  
Sbjct: 299 RDEKMVEEQFEKD 311


>gi|290890856|ref|ZP_06553922.1| hypothetical protein AWRIB429_1312 [Oenococcus oeni AWRIB429]
 gi|290479507|gb|EFD88165.1| hypothetical protein AWRIB429_1312 [Oenococcus oeni AWRIB429]
          Length = 324

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 13/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  N++         K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  
Sbjct: 1   MKII-NLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQS 59

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P     +   +   + P   + ++LEK+G   +    + L   + S E ++    +  L 
Sbjct: 60  PAGFYVNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLTFGSQSPEDYVDNY-LAKLG 118

Query: 118 VKTVITGTKFRFGK-DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              V+ G    +G      D   L +      F    + E  +   + +SS+ IR  L++
Sbjct: 119 ASVVVAGFDHTYGSLKDKADMKHLPRYANGR-FEVYTVGECSDYFGK-ISSTRIRRLLSE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT--- 232
           G +     LLGY+F     V+HG +IGR +GFPTAN  L    +L K GVYA+R +    
Sbjct: 177 GDLQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTG 236

Query: 233 -QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + 
Sbjct: 237 PLAGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANA 296

Query: 292 EKLKIYMGEDEKKARKILES 311
           E L   + +D   +  +L+ 
Sbjct: 297 EALIDQLKQDRIDSLDLLKE 316


>gi|225570601|ref|ZP_03779626.1| hypothetical protein CLOHYLEM_06703 [Clostridium hylemonae DSM
           15053]
 gi|225160614|gb|EEG73233.1| hypothetical protein CLOHYLEM_06703 [Clostridium hylemonae DSM
           15053]
          Length = 309

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 15/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M     +E  ++         V +G FDG+HLGH  + +   +          V +F+  
Sbjct: 1   MQYIKGLEAYEA----DGRSAVTLGKFDGLHLGHKKLTDMVKEYGRQDDIKSIVCAFD-- 54

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
             +++     I    L     ++  LE+     L+   FT E +   AE+FI+ V+    
Sbjct: 55  -MSVLWEKKGISREVLMTKDERKNHLEEE-VDCLVDCPFTEEFSRMEAEEFIENVICNIF 112

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ GT FRFG  + GD  +LQ    KY +  + I++ R  +  I+SS+ I+  L +
Sbjct: 113 RAAYVVVGTDFRFGHGKRGDIHMLQAYARKYDYELIVIEKER-REGHIISSTYIKQILKE 171

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQ 235
           G++     LLGY + ++  V HG+K+GR LGFPT N+  + + ++   GVY  R +  D 
Sbjct: 172 GNMPFVCELLGYPYGLQGVVEHGKKLGRRLGFPTFNVAPAREKVMPPNGVYLNRVQV-DG 230

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+AN G  PT+     LL+ES++FD+S + YG+   +   ++ RPE KF D+E++K
Sbjct: 231 VWYDGIANIGVKPTVSDEERLLVESYLFDYSGDAYGKEVQIELLEFCRPEQKFADVEEMK 290

Query: 296 IYMGEDEKKARKILE 310
             +  D    R+  E
Sbjct: 291 KCVAGDIAFGRQYFE 305


>gi|160932913|ref|ZP_02080302.1| hypothetical protein CLOLEP_01754 [Clostridium leptum DSM 753]
 gi|156867987|gb|EDO61359.1| hypothetical protein CLOLEP_01754 [Clostridium leptum DSM 753]
          Length = 317

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITVLSFNPHP 59
           M VF+ +E  Q      +   VA+G FDG+H GH  ++ +A+ + AN    +V +F   P
Sbjct: 2   MQVFNGLEKAQ------RPAAVALGCFDGLHKGHQAVIRKAVTEKANGLVPSVFTFPESP 55

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              +        L   +++EK+LE +G  AL    F     +   E F++++L   L  +
Sbjct: 56  LAELTGRGKP-RLMSNTLKEKMLEDLGVEALYLAPF-AAVKDLPPEAFVEEILKNTLRAE 113

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  + FG      +  L+      G     +  +   +   VSS+ IR AL KG  
Sbjct: 114 KVFCGYNYHFGAGGTAGKEELKALCRPRGIQVCDLPPV-TLEGAPVSSTRIRKALEKGGA 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSY 238
             A  LLG+ F+ + +V+HG  IG  +G PT N     D L  + GVYA         +Y
Sbjct: 173 RQARELLGHPFSYDFEVVHGRHIGHLMGTPTLNQVFPEDYLVPRYGVYASLVSFDQVVTY 232

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQE-IYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            GV N G  PT+      L E+++ D+  E +YG+       +++RPE +F  +E+L+  
Sbjct: 233 -GVTNIGVKPTVGAEEKPLSETWMPDYDGEALYGKMVKTELLEFIRPEKRFGGLEELRAM 291

Query: 298 MGEDEKKARKILES 311
           + ++ ++AR I E 
Sbjct: 292 ILKNGEQARGIAEK 305


>gi|313885878|ref|ZP_07819618.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924633|gb|EFR35402.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 317

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 14/309 (4%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTL 72
             ++  VVA+G FDG+HLGH  ++ Q + IA    +T  V++F PHP+ ++    P   +
Sbjct: 5   ESMRHLVVAMGAFDGVHLGHQALIHQVLTIAKQDHLTSGVVTFEPHPQLVLHPERPFRLI 64

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +E +L +MG   +    FT+  +  SAE+F++  L E L++ T++ G    FG D
Sbjct: 65  TLEREKELLLHQMGIERVAVIPFTVALSQMSAEEFLRTYLDEQLQIHTLVVGFDHHFGHD 124

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHLLGYR 189
           +       Q    +YG   +  +      S     +SS+ IR  +  G V  A   LG+ 
Sbjct: 125 KGLAFEDYQAIAHRYGIRCIRGEAYTLGDSTSQDPISSTAIRRWIDTGAVTEAERQLGHP 184

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT-----SYSGVA 242
           +TI   V  G +IGR LG+PTAN+++      L   GVY  R                + 
Sbjct: 185 YTILGKVKTGLQIGRKLGYPTANIEVPSPHKALPPAGVYMARTTIDPFGASQQRDIPSML 244

Query: 243 NFGRNPTMV-PNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             G  PT+       ++E F+    + ++YGQ   +S  D LR E+ F+ ++ L+  +  
Sbjct: 245 YIGTRPTLELAEEETMIEVFLMGGEEYQLYGQELQISLCDRLRQELHFESLDALRKQITR 304

Query: 301 DEKKARKIL 309
           DE+  R+  
Sbjct: 305 DEEAVRRYF 313


>gi|332300597|ref|YP_004442518.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332177660|gb|AEE13350.1| riboflavin biosynthesis protein RibF [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 311

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 14/307 (4%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSP 74
           ++  VVA+G FDG+HLGH  ++ Q + IA    +T  V++F PHP+ ++    P   ++ 
Sbjct: 1   MRHLVVAMGAFDGVHLGHQALIRQVLTIAKQDHLTSGVVTFEPHPQLVLHPERPFRLITL 60

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +E +L +MG   +    FT+  +  SAE+F++  L E L++ T++ G    FG D+ 
Sbjct: 61  EREKELLLHQMGIERVAVIPFTVALSQMSAEEFLRTYLDEQLQIHTLVVGFDHHFGHDKG 120

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
                 Q    +YG   +  +      S     +SS+ IR  +  G V  A   LG+ +T
Sbjct: 121 LAFEDYQAIAHRYGIRCIRGEAYTLEDSTSQDPISSTAIRRWIDTGAVTEAERQLGHPYT 180

Query: 192 IESDVIHGEKIGRTLGFPTANMQL--SPDILLKEGVYAIRFRTQDQT-----SYSGVANF 244
           I   V  G +IGR LG+PTAN+++      L   GVY  R                +   
Sbjct: 181 ILGKVKTGLQIGRKLGYPTANIEVPSPHKALPPAGVYMARTTIDPFGASQQRDIPSMLYI 240

Query: 245 GRNPTMV-PNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           G  PT+       ++E F+    + ++YGQ   +S  D LR E+ F+ ++ L+  +  DE
Sbjct: 241 GTRPTLELAEEETMIEVFLMGGEEYQLYGQELQISLCDRLRQELHFESLDALRKQITRDE 300

Query: 303 KKARKIL 309
           +  R+  
Sbjct: 301 EAVRRYF 307


>gi|293400610|ref|ZP_06644755.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291305636|gb|EFE46880.1| riboflavin biosynthesis protein RibF [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 310

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/314 (25%), Positives = 156/314 (49%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +     I+  +    +     IG FDG+HLGH  ++++ ++IA  +     +++F+P 
Sbjct: 1   MEILR-FNIHTPIECRERITA-CIGYFDGLHLGHQQLVKRVLEIAEKTHTIPALITFDPD 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +++    I  ++P   ++ I  K+G    I   F  + A  S EQF  +++++ L +
Sbjct: 59  PWVVLKKLHNIPHITPMKHRQDIGAKLGIQKWIILDFQKDMAQLSYEQF-HELVLKPLHI 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G  F +     G    LQ    ++ F    ++E+ +  ++ +SS+ I  ++ +G 
Sbjct: 118 ETLVCGYDFHYANRGEGSVKTLQA---QHFFKVEVVEEIAS-ANEKISSTRIEQSIKRGE 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +   A ++G  + +   V  G ++GR  GFPTAN++     I+ K+GVY       D T 
Sbjct: 174 MEETADIMGRFYEMRGIVKSGNRVGRKYGFPTANLKTQGEYIMPKQGVYIGSVFVLD-TW 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           +  + N G NP+        +E+++ DF + IY +  T  F  +LR E KF  +++LK  
Sbjct: 233 WMAIINVGHNPSFNYQQNTSIEAYLLDFDKMIYDKTVTFRFHRFLREEQKFAGMQELKEQ 292

Query: 298 MGEDEKKARKILES 311
           + +D  +AR     
Sbjct: 293 LLKDCDRARNYFRQ 306


>gi|288925360|ref|ZP_06419294.1| riboflavin biosynthesis protein RibF [Prevotella buccae D17]
 gi|288337831|gb|EFC76183.1| riboflavin biosynthesis protein RibF [Prevotella buccae D17]
          Length = 315

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 147/313 (46%), Gaps = 8/313 (2%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTI 62
             I+I + +   +   V  IG FDG+H GH  ++ + I  A       TV++F+ HPR +
Sbjct: 2   KTIQITKDM-EPMNPCVATIGFFDGVHRGHQYLIRKLIADARAEGMESTVITFDLHPRKV 60

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +QS      LS  S +  +L K          F  E A  +A +F++++L + L V+ + 
Sbjct: 61  LQSDYQPRMLSTLSEKLLLLSKTSVDNTALLHFDEEMARMTAREFMEQILRDKLNVRKLY 120

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            G   RFG DR        + G + G   V       N   + S S +R+ L  G V  A
Sbjct: 121 IGYDHRFGHDRKEGFDDYVRYGRELGMEVVLSQAFELNGVNVSS-SVVRSFLEAGEVEMA 179

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQTSYS- 239
              LGY +TI   V+ G + GR +GFPTAN+  +    ++   GVYA++ R ++      
Sbjct: 180 EMCLGYPYTIVGKVVKGYQEGRKMGFPTANLDTTGFDKLIPAPGVYAVKARLENSMEMKR 239

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            + N G  PT        LE++I +F ++IYG+   VSF   +R E +F   E L+  + 
Sbjct: 240 AMMNIGVRPTF-GGTETTLETYILNFGEDIYGKMMLVSFAHRIREEQRFPSAEALREQLE 298

Query: 300 EDEKKARKILESS 312
            DEK   +  E  
Sbjct: 299 RDEKMVEEQFEKD 311


>gi|116491305|ref|YP_810849.1| FMN adenylyltransferase / riboflavin kinase [Oenococcus oeni PSU-1]
 gi|116092030|gb|ABJ57184.1| FMN adenylyltransferase / riboflavin kinase [Oenococcus oeni PSU-1]
          Length = 324

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 13/320 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +  N++         K  V+A+G FDG+HLGH  +++QA +IA+     + +L+++  
Sbjct: 1   MKII-NLQFPNKYSAKKKEFVLAMGYFDGLHLGHRAVIQQAKRIADKQHLKLALLTYSQS 59

Query: 59  PRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           P     +   +   + P   + ++LEK+G   +    + L   + S E ++    +  L 
Sbjct: 60  PAGFYVNDPVLKVPILPFRQKMQMLEKLGVDTIFLIDYNLTFGSQSPEDYVDNY-LAKLG 118

Query: 118 VKTVITGTKFRFGK-DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
              V+ G    +G      D   L +      F    + E  +   + +SS+ IR  L++
Sbjct: 119 ASVVVAGFDHTYGSLKDKADMKHLPRYANGR-FEVYTVRECSDYFGK-ISSTRIRRLLSE 176

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT--- 232
           G +     LLGY+F     V+HG +IGR +GFPTAN  L    +L K GVYA+R +    
Sbjct: 177 GDLQAVNELLGYQFQTVGFVVHGNQIGRRIGFPTANQALEEKQLLPKSGVYAVRTKIVTG 236

Query: 233 -QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                S++G+A+ GRN T   + P+ +E  +FDFS ++Y +   V +  +LR ++K+ + 
Sbjct: 237 PLAGRSFNGMASIGRNETFGSDNPITIEINLFDFSADVYDEEIIVYWISFLREQVKYANA 296

Query: 292 EKLKIYMGEDEKKARKILES 311
           E L   + +D   +  +L+ 
Sbjct: 297 EALIDQLKQDRIDSLDLLKE 316


>gi|257784629|ref|YP_003179846.1| riboflavin biosynthesis protein RibF [Atopobium parvulum DSM 20469]
 gi|257473136|gb|ACV51255.1| riboflavin biosynthesis protein RibF [Atopobium parvulum DSM 20469]
          Length = 345

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 7/304 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V  +G FDG+H GH  +L  A K   A   P+  ++F P P  ++   SP   LS  
Sbjct: 38  QPCVCVLGVFDGLHEGHQGLLAIAKKDAEARKVPLVAVTFLPDPVEVLFDGSPQRLLSG- 96

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L   G   ++ + FT E A  S  Q+++  L+  +   +V  G+ F  G   A 
Sbjct: 97  EDRLRALAAWGVDGILVHHFTREFAALSGTQYVESKLLPCVPAVSVHVGSDFGLGAQGAE 156

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              +L   G ++GF      EL  +  + +S++ IR  L +G V +AA LLG    +   
Sbjct: 157 GSALLAALGRQHGFEV-HAHELFCSGGEKISATRIRNLLGQGRVEDAASLLGRWHFVSGV 215

Query: 196 VIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V HG   G   GFPTAN+ L   D + ++GVYA  +     T++    N G+ P+     
Sbjct: 216 VKHGRGQGTGFGFPTANVALDVRDCIPQDGVYAC-YVVHGATAWPAAVNVGKAPSFESQT 274

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK-KARKILESSY 313
             LLE+ +  FS  +YG +    F   LR   KF  ++ LK  +  +    A+ +  +SY
Sbjct: 275 GPLLEANLLGFSGNLYGSQVQTVFVKRLRESKKFDSLQDLKQAVRGNIDWVAQNLGTTSY 334

Query: 314 PLSE 317
            L  
Sbjct: 335 NLES 338


>gi|326561333|gb|EGE11691.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis 7169]
          Length = 323

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 137/323 (42%), Gaps = 32/323 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +      +  LP  L    + IGN+DG+HLGH  +L      A    +   V+ F P 
Sbjct: 1   MQII--FLDSHHLPT-LPPLALTIGNYDGVHLGHQALLSALADDAKAMGLLPAVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P   L+  + + + + ++G   LI   F     + SA  F+  +    L V
Sbjct: 58  PREYFSPDNPPARLTNLTEKAEQITQLGVQYLIVASFDDAFRSLSAAAFVDLL--HSLNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  FRFG+DR GD+  LQ      GF    +  +  N    +SSS +R AL  G 
Sbjct: 116 SHLVLGDDFRFGQDRVGDKAFLQAA----GFSVDNLPSITQN-GVRISSSLVRQALAVGD 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR--------- 229
           +  A  +LG  + I   V HG+KIGRTL FPTAN+ L        G++A           
Sbjct: 171 LNAAKSMLGRSYGITGVVEHGDKIGRTLDFPTANVSLGRLKPALHGIFAADVIAYQNGVR 230

Query: 230 ----------FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
                          Q S  G  + G  P++       LE  + DF+ E+YG    V F 
Sbjct: 231 LDWTSLGQGGVMGLKQGSLFGAVSIGLRPSV-GGKQWRLEVHLPDFNGELYGVTLWVVFT 289

Query: 280 DYLRPEIKFKDIEKLKIYMGEDE 302
            +L  E  +  ++ LK  +  D 
Sbjct: 290 HFLHGERHYDGVDALKAGITNDV 312


>gi|296112569|ref|YP_003626507.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis RH4]
 gi|295920263|gb|ADG60614.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis RH4]
 gi|326560154|gb|EGE10543.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           103P14B1]
 gi|326564241|gb|EGE14475.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           46P47B1]
 gi|326567608|gb|EGE17721.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           12P80B1]
 gi|326569731|gb|EGE19781.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC8]
 gi|326570762|gb|EGE20787.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC1]
 gi|326571663|gb|EGE21678.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis BC7]
 gi|326573025|gb|EGE23001.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis CO72]
 gi|326573547|gb|EGE23510.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis
           101P30B1]
 gi|326577692|gb|EGE27568.1| riboflavin biosynthesis protein RibF [Moraxella catarrhalis O35E]
          Length = 323

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 137/323 (42%), Gaps = 32/323 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +      +  LP  L    + IGN+DG+HLGH  +L      A    +   V+ F P 
Sbjct: 1   MQII--FLDSHHLPT-LPPLALTIGNYDGVHLGHQALLSALADDAKAMGLLPAVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +P   L+  + + + + ++G   LI   F     + SA  F+  +    L V
Sbjct: 58  PREYFSPDNPPARLTNLTEKAEQITQLGVQYLIVASFDDAFRSLSAAAFVDLL--HSLNV 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G  FRFG+DR GD+  LQ      GF    +  +  N    +SSS +R AL  G 
Sbjct: 116 SHLVLGDDFRFGQDRVGDKAFLQAA----GFSVDNLPSITQN-GVRISSSLVRQALAVGD 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR--------- 229
           +  A  +LG  + I   V HG+KIGRTL FPTAN+ L        G++A           
Sbjct: 171 LNAAKSMLGRSYGITGVVEHGDKIGRTLDFPTANVSLGRLKPALHGIFAADVIAYQNGVR 230

Query: 230 ----------FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
                          Q S  G  + G  P++       LE  + DF+ E+YG    V F 
Sbjct: 231 LDWASLGQGGVMGLKQGSLFGAVSIGLRPSV-GGKQWRLEVHLPDFNGELYGVTLWVVFT 289

Query: 280 DYLRPEIKFKDIEKLKIYMGEDE 302
            +L  E  +  ++ LK  +  D 
Sbjct: 290 HFLHGERHYDGVDALKAGITNDV 312


>gi|320102616|ref|YP_004178207.1| Riboflavin kinase [Isosphaera pallida ATCC 43644]
 gi|319749898|gb|ADV61658.1| Riboflavin kinase [Isosphaera pallida ATCC 43644]
          Length = 376

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 154/366 (42%), Gaps = 58/366 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           I     LP  ++G V++IGNFDG+H GH ++LE+   +AN    P   L+F+PHP  +++
Sbjct: 4   IRDFTPLPTEVRGAVLSIGNFDGVHRGHRVLLERVRALANQLGGPALALTFDPHPLALLK 63

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                 TL+  + + ++L + G   +  ++      N +A +F  +VL+   + + ++ G
Sbjct: 64  PDRVPATLTRLARRVQLLRQAGMDEVAVFQTGPWLLNLTAREFFDRVLIRQFQARGIVEG 123

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------------- 164
             F FGKDR GD   L    ++ G     +  +R                          
Sbjct: 124 PNFMFGKDRGGDPERLAGWCKESGVVFEVVAAVREGTVGFEAWRPSENDPRLLEPSKQAG 183

Query: 165 ---------VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
                    VSSS IR  +  G V  AAH LG    +E  V+ G + GR LGFPTAN++ 
Sbjct: 184 SQGDPFHAPVSSSRIRGLIDAGRVEEAAHWLGRPHRLEGRVVGGAQRGRELGFPTANLEA 243

Query: 216 SPDILLKEGVYAIRFRTQDQTS------------------------YSGVANFGRNPTMV 251
             +++  +GVYA                                   +   + G N T  
Sbjct: 244 IVEMIPADGVYAALAHVGPHQRDLDADPTGRLAEEWESGRLAPSLLRAAAVHVGPNATF- 302

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
                 +E+F+ DF  ++YG R  +     LR   KF  +E L   M  D +  R +  +
Sbjct: 303 GVNQRSVEAFLLDFQGDLYGHRLALDLIAQLRHSQKFDSVEGLIARMNVDVELTRAL--T 360

Query: 312 SYPLSE 317
             PL+E
Sbjct: 361 LQPLAE 366


>gi|259501591|ref|ZP_05744493.1| riboflavin biosynthesis protein RibF [Lactobacillus iners DSM
           13335]
 gi|302191435|ref|ZP_07267689.1| FAD synthase [Lactobacillus iners AB-1]
 gi|259167109|gb|EEW51604.1| riboflavin biosynthesis protein RibF [Lactobacillus iners DSM
           13335]
          Length = 309

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPKKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IHTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ + S  IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINSKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFN-NSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSLIKQLNIDKTNIQRHFDKK 309


>gi|228470195|ref|ZP_04055102.1| riboflavin biosynthesis protein RibF [Porphyromonas uenonis 60-3]
 gi|228308146|gb|EEK17009.1| riboflavin biosynthesis protein RibF [Porphyromonas uenonis 60-3]
          Length = 304

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 14/303 (4%)

Query: 24  IGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +G FDG+HLGH  ++ Q   I   ++    V++F+PHP+ ++    P   ++    +E +
Sbjct: 1   MGAFDGVHLGHQALIRQVLTIAERDHLTSGVVTFDPHPQLVLHPERPFRLITLEREKELL 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L +MG   +    FT+  +  SAE+F++  L E L + T++ G    FG D+  D    Q
Sbjct: 61  LHQMGIERVAVIPFTVSLSQMSAEEFLRTYLDEQLHIHTLVVGFDHHFGHDKGLDFADYQ 120

Query: 142 KRGEKYGFHTVFIDELRNNKS---QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
              + YG   +  +      S     +SS+ IR  +  G V  A   LG+ +TI   V  
Sbjct: 121 AIAQHYGIRCIRGEAYTLGDSTSQDPISSTAIRRWIDTGAVTEAERQLGHPYTILGKVKT 180

Query: 199 GEKIGRTLGFPTANMQLSPDI--LLKEGVYAIRFRTQDQT-----SYSGVANFGRNPTMV 251
           G +IGR LG+PTAN+++      L   GVY  R                +   G  PT+ 
Sbjct: 181 GLQIGRKLGYPTANIEVPSPYKALPPAGVYMARTTIDPFGATQQRDIPSMLYIGTRPTLE 240

Query: 252 -PNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                 ++E F+    +  +YGQ   +S  D LR E+ F+ ++ L+  +  DE+  R+  
Sbjct: 241 LAKEETMIEVFLMGGEEYHLYGQELQISLCDRLRQELHFESLDALRKQITRDEEAVRRYF 300

Query: 310 ESS 312
           + S
Sbjct: 301 QLS 303


>gi|225868637|ref|YP_002744585.1| riboflavin biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701913|emb|CAW99421.1| putative riboflavin biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 310

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M + H I+  Q + +     V+ +G FDG+H GH  + ++A +I+      I  L+F+  
Sbjct: 1   MDIQH-IKSYQEI-DESADTVLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHES 58

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP F   ++ P  + +   + G   L    FT   +  S++ FI    +  L
Sbjct: 59  PQLAFTRFSPDFLQHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHY-IGRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  + FG D A D   L KR +        I E++ ++   +SS+ IR+ +  
Sbjct: 118 RARHIVVGFDYHFGCDHA-DSHYLAKRIKG---TVYSISEVKEDQ-IKISSTRIRSLIKA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY      +  
Sbjct: 173 GDVAKANQLLGYELSTRGMVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVTDVLVRG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IF F+++IYG+   + + D +R   KF D+    
Sbjct: 232 ERYRSMTSIGKNITF-GGKDLRLEANIFGFNEDIYGETLEIIWLDRIREMTKFSDVSTFI 290

Query: 296 IYMGEDEKKARKI 308
             + +D++ A   
Sbjct: 291 SQLKQDKEAAINW 303


>gi|116072359|ref|ZP_01469626.1| Riboflavin kinase / FAD synthetase [Synechococcus sp. BL107]
 gi|116064881|gb|EAU70640.1| Riboflavin kinase / FAD synthetase [Synechococcus sp. BL107]
          Length = 279

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 38  LEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL 97
           +E         P  V SF PHPR ++   + +  L  P  +  +L  +G   L+   FT 
Sbjct: 5   IEGLDPEIGAVPSVV-SFWPHPREVLFGETRL-RLDLPHEKLSLLGPLGIEQLVLVPFTK 62

Query: 98  ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157
           E A  SAE+F   VL+E L+ K +  GT FRFG  RAGD  +LQ+   + G     ++ +
Sbjct: 63  ELAQLSAEEFADSVLLETLQAKRIAVGTNFRFGHRRAGDAELLQRLAHRRGVDVRIVEIV 122

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS- 216
            +   ++ SSS IR+AL +G +  A  LLG  +  +  V+ G  +GR +G+PTAN+Q+  
Sbjct: 123 EDADGRM-SSSRIRSALEQGALTQAEALLGRPYRFQGTVVRGRGLGREIGWPTANLQVDG 181

Query: 217 PDILLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCT 275
              L   GVYA   +    +     V N G  PT+ PN P  +E  + D + E+  +   
Sbjct: 182 RKFLPGLGVYAAWVQLDGAEDVMPAVMNLGPQPTVDPNSPSAVEVHLLDRNLELEHRELV 241

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           V     LR + KF  +++L   +G D + AR++L +
Sbjct: 242 VEPVHRLRGQQKFNGLQELSAQIGHDAEAARQLLRN 277


>gi|309808388|ref|ZP_07702289.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           01V1-a]
 gi|308168373|gb|EFO70490.1| riboflavin biosynthesis protein RibF [Lactobacillus iners LactinV
           01V1-a]
          Length = 309

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 8/297 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             VV +G FDG+H+ H  I+ +A KI      P+ VL+F+ HP+ +         +   S
Sbjct: 18  NAVVVLGFFDGVHIAHQKIIFKARKIADDKQVPLVVLTFDKHPKELYLDDKNFKYIDTLS 77

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +   + K     L+  KF           FI  V++       V+ G  + +G  +  +
Sbjct: 78  EKTAKMRKFNVDLLVVMKFNESMCRLKPADFIDNVIL-MFNPSVVVVGYDYTYGPQKIAN 136

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L    +  G   + I+     K + + S+ I+ A++ G+V  AA LLG  +++   V
Sbjct: 137 IQTLLTYSK--GKFDLVIEPEATFKGEKIGSTEIKEAISHGNVKLAADLLGCPYSMSGVV 194

Query: 197 IHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   G  LGFPTAN+ ++   IL   GVYA +   +    Y+ + + G N T   N  
Sbjct: 195 VHGFHRGHMLGFPTANLCINCKKILPCNGVYATQTLIKG-KLYNSMTSVGYNDTFN-NSK 252

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             +E++IFDF ++IY ++  + +++++R  IKF DI  L   +  D+   ++  +  
Sbjct: 253 KTIETYIFDFCEDIYDEKIILYWYEFIRNNIKFNDINSLIKQLNIDKTNIQRHFDKK 309


>gi|317490687|ref|ZP_07949153.1| riboflavin biosynthesis protein RibF [Eggerthella sp. 1_3_56FAA]
 gi|316910218|gb|EFV31861.1| riboflavin biosynthesis protein RibF [Eggerthella sp. 1_3_56FAA]
          Length = 307

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 7/296 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
            KG   A G FDG+H GH  +L+ A             L+F+  P  +    + +  L  
Sbjct: 16  FKGTSCAFGVFDGVHRGHRYLLDCARSTAAETGGASVALTFDIDPDEVFHP-TRLKKLMT 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + ++L   G   +    FT + A  S E+F+ +   +      +  G  F+FG   A
Sbjct: 75  NEERVRMLADSGIDVVAVLPFTRDFAASSPEEFLVQTF-DGTVPSFLHVGYDFKFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L       G  +V   +L+++    ++++ IR  L  G V  A  LLG  + +  
Sbjct: 134 GTVRDLDS-WAAVGGTSVQAHDLKSDDGAPITATRIRLLLAGGDVEEANRLLGRPYFMTG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V  G   G  +GF TAN+ +   +    +GVYA      D   Y    N G   T    
Sbjct: 193 VVEPGRGEGADMGFRTANLVVPDQMRPLGDGVYAAYAHV-DGVRYKAAVNVGVAATFADR 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                E  + DFS ++YG+   V F  +LRP  KF D+++L   +  +    R+ L
Sbjct: 252 ATATCEVHLLDFSGDLYGKPVKVEFLHWLRPMRKFDDLDELIATVKGNIAWVRENL 307


>gi|329121248|ref|ZP_08249875.1| riboflavin biosynthesis protein [Dialister micraerophilus DSM
           19965]
 gi|327470182|gb|EGF15645.1| riboflavin biosynthesis protein [Dialister micraerophilus DSM
           19965]
          Length = 317

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 14/318 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + H++E      N  +  V AIG FDGIH GH  IL Q  K+A        +++F PH
Sbjct: 1   MKIIHSLEEM----NIKEPIVFAIGFFDGIHKGHQEILNQTKKLAAKKSAKSGIITFYPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P ++I   +P+  +   + + +IL+K     +I  K  +E  + S E+F+ K+  ++  +
Sbjct: 57  PLSVIFPENPVKLILTQTEKYEILKKYNLDIIIEIKPDIEFLHQSHEEFLNKL-KKFSNL 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTK 176
           K +I G  F FG   +G+   ++K   K       I+ ++N    + ++SS+NIR  +  
Sbjct: 116 KGIIVGENFTFGYKGSGNAETMKKFF-KNEVEVKKINLIKNTLTDNTVISSTNIRKFIAD 174

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLS-PDILLKEGVYAIRFRTQD 234
           G++  A   LG  + I   ++HG K G  L G PTAN++     +L  +GVYA     + 
Sbjct: 175 GNMREAMKFLGRPYFITDKIVHGFKRGSELLGIPTANLEYGFERMLPSDGVYATYIEVKG 234

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +  + N G NPT   +    +E+FI DF +EIYGQ   + + + +R EIKF+  + L
Sbjct: 235 NK-HPSITNIGTNPTFN-DKERTIETFILDFDEEIYGQIVKLEWIEKVRDEIKFEKYQDL 292

Query: 295 KIYMGEDEKKARKILESS 312
            + + +D +KA +IL+ S
Sbjct: 293 ILQIKKDIEKAGEILKRS 310


>gi|322372970|ref|ZP_08047506.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C150]
 gi|321278012|gb|EFX55081.1| riboflavin biosynthesis protein RibF [Streptococcus sp. C150]
          Length = 303

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V  +I   + + +  K  V+ +G FD +H GH ++ ++A +I       + VL+FN  
Sbjct: 1   MKVT-SINDYKDI-HQEKETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + E  G   L    F  + A  S++ FI +  ++ L
Sbjct: 59  PQLTFQRYTDDLLLHITAPQRRCNLFEAYGTDQLYLTDFNSDFARTSSDDFIDRY-IKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + ++ G  ++FG  R  D   L +         V + E + +  + +SS+ +R  + +
Sbjct: 118 KAQEIVVGFDYKFGHHRT-DADYLARNFSGR----VHVIEEQQSDGEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLG+ F+    V+HG+  GRT+GFPTAN+  +    L  +GVY +     D 
Sbjct: 173 GKVKEANDLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTFLPADGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + +Y+R  +KF  I++L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLEYIRDMVKFNSIDELC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K  RK 
Sbjct: 291 GQLNADKKNRRKF 303


>gi|312862673|ref|ZP_07722913.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           F0396]
 gi|311101533|gb|EFQ59736.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           F0396]
          Length = 303

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  +I   + +    K  V+ +G FD +H GH ++ ++A +I       + VL+FN  
Sbjct: 1   MKIT-SINDYKDI-YQEKETVLVLGYFDALHRGHKVLFDKARQIADDKQLEVAVLTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + E  G   L    F  + A  S++ FI +  ++ L
Sbjct: 59  PQLTFQRYTDDLLLHITAPQRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIARY-IKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  ++FG  R  D   L +         V + E + +  + +SS+ +R  + +
Sbjct: 118 KAQEVVVGFDYKFGHHRT-DADYLARNFSGR----VHVIEEQQSDGEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +    L  +GVY +     D 
Sbjct: 173 GKVKEANYLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTYLPADGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K A K 
Sbjct: 291 DQLEADKKIAEKF 303


>gi|257125982|ref|YP_003164096.1| riboflavin biosynthesis protein RibF [Leptotrichia buccalis
           C-1013-b]
 gi|257049921|gb|ACV39105.1| riboflavin biosynthesis protein RibF [Leptotrichia buccalis
           C-1013-b]
          Length = 336

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/290 (32%), Positives = 162/290 (55%), Gaps = 11/290 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +GNFDGIH GH +ILE+A+K A   N    V +F+ +P+      +    ++  S +
Sbjct: 39  IVILGNFDGIHKGHKIILEKAVKKAKEKNLKTIVYTFSEYPK------NRQNKITTCSEK 92

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L +     L   +F  +  NYS E+F++KV+V  L    V  G  F FGK ++G+  
Sbjct: 93  AYLLNENKIDYLYLEEF-EKVRNYSPEEFVEKVIVNILNASEVYCGFNFTFGKKKSGNVI 151

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K  ++        + + +  ++I+SS+ IR  +   +      LLG+   I   VI+
Sbjct: 152 MLEKLLKEKNIKLNIQEPVLDENNEIISSTRIRKYIENTNFTKVKELLGHNLIILGKVIY 211

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGPLL 257
           G+++GR +GFPTAN++    +  + GVY ++   + D+  Y+GV N GRNPT+   G L 
Sbjct: 212 GKQLGRVIGFPTANLRFESKVYPEFGVYGVKIYIENDEKVYNGVMNIGRNPTV-DIGVLS 270

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           +E+ IF+F+++IYG+   +   + +RPE KF  +E+LK  +G D    ++
Sbjct: 271 VETNIFNFNEDIYGKVILIEVLENIRPEKKFNSVEELKTQIGNDVNYWKQ 320


>gi|290770196|gb|ADD61954.1| putative protein [uncultured organism]
          Length = 309

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/298 (30%), Positives = 140/298 (46%), Gaps = 6/298 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  V A+G FDG+H GH LI+  A++ A        V  F     T       I  L   
Sbjct: 13  KKTVCALGLFDGVHRGHQLIITTAVQKAQSLGGQSAVFCFKTDTVTSKGHDGRIEMLMSD 72

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + + ++G   L    F L       E F++KVL E L     + G  F FG+   G
Sbjct: 73  DEKHEKMAELGVEVLFSPDFAL-FKGMEPEGFVKKVLKEKLNCCGAVCGNDFTFGRGAQG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+K GEKY      +  L    ++++SS+ IR  + +G +  A  +LGY F    +
Sbjct: 132 KAADLKKLGEKYDMDVEIVSPLLM-GNEVISSTEIRRCVREGEIAKANEMLGYHFGFCIE 190

Query: 196 VIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V HG + GRT  FPT N Q+    ++ K GVY       D   Y+GV N G  PT+    
Sbjct: 191 VEHGFQRGRTWDFPTINQQIPKGRVMPKFGVYCSTVEI-DGKKYAGVTNIGVKPTVHVET 249

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L E+FI D+  ++YG++  +   ++LRPE  F   + L+  +  ++++A +  E +
Sbjct: 250 APLAETFIVDYHGDLYGRKLKLELHEFLRPEKMFDSFDSLREEIARNKEQAVRYFEEN 307


>gi|166030869|ref|ZP_02233698.1| hypothetical protein DORFOR_00549 [Dorea formicigenerans ATCC
           27755]
 gi|166029136|gb|EDR47893.1| hypothetical protein DORFOR_00549 [Dorea formicigenerans ATCC
           27755]
          Length = 298

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 19/313 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M     +E      ++ +   V  G FDG+H GH  +++   K+ +       V +F+  
Sbjct: 1   MQYIRGLEHY----DNARKTAVTFGKFDGLHKGHMTLVDTVKKLQDKDDVDSVVCAFDM- 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                        L  P  ++  LE      L+   FT E     AE FI+ +++     
Sbjct: 56  --------DSPALLMLPQERQIHLEDE-VDYLVDCPFTDEIRQMRAEDFIRNIIIGTFHA 106

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V+ GT F+FG ++ GD  +L +  E+YG+  + ++++R  ++ I+SS+  +  L  G+
Sbjct: 107 AYVVVGTDFQFGYNKEGDIYMLAQYQERYGYRLIVLEKIRY-ENHIISSTYTKKILGTGN 165

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS 237
           +     LLGY + I   V HG K+GRTLGFPT N+      I+   GVY  R        
Sbjct: 166 MDLVGRLLGYSYGICGTVEHGHKLGRTLGFPTMNIAWPKRKIIPPRGVYLCRAYMDGYG- 224

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y+G+AN G  PT+     + LE+F+FD+  + YG+   V   +++RPE KF+  E+LK  
Sbjct: 225 YNGIANVGVRPTVSNEEKVWLETFLFDYEADAYGKEVMVELIEFVRPEQKFESKEELKAR 284

Query: 298 MGEDEKKARKILE 310
           + +D    R+  +
Sbjct: 285 VDKDIASGRQYFQ 297


>gi|116627788|ref|YP_820407.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus thermophilus LMD-9]
 gi|116101065|gb|ABJ66211.1| FMN adenylyltransferase / riboflavin kinase [Streptococcus
           thermophilus LMD-9]
 gi|312278348|gb|ADQ63005.1| FMN adenylyltransferase / riboflavin kinase [Streptococcus
           thermophilus ND03]
          Length = 306

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M V   I   + + +  K  V+ +G FD +H GH ++ ++A +I       + VL+FN  
Sbjct: 1   MKVT-PINDYKDI-HQDKETVLVLGYFDALHRGHKVLFDKARQIADEKQLEVAVLTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + +  G   L    F  + A  S++ FI +  +  L
Sbjct: 59  PQLTFQRYTDDLLLHITAPQRRCDLFKAYGTDQLYLTDFNSDFARTSSDDFITRY-INRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + ++ G  ++FG  R  D   L    ++    TV + E + +  + +SS+ +R  + +
Sbjct: 118 KAQEIVVGFDYKFGHHRT-DTDYL----DRNFSGTVHVIEEQQSGGEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +   IL  +GVY +     D 
Sbjct: 173 GNVKEANNLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTILPADGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDIIKFNNIDELC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K A   
Sbjct: 291 DQLKADKKIAENF 303


>gi|262038061|ref|ZP_06011467.1| riboflavin biosynthesis protein RibF [Leptotrichia goodfellowii
           F0264]
 gi|261747928|gb|EEY35361.1| riboflavin biosynthesis protein RibF [Leptotrichia goodfellowii
           F0264]
          Length = 335

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/307 (29%), Positives = 164/307 (53%), Gaps = 14/307 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +GNFDG+H GH  +LE+A+K          V +F  +P+           ++ PS +
Sbjct: 36  IVILGNFDGVHRGHAKLLERAVKKAREKGYKTIVYTFCEYPQ------KKESRITTPSEK 89

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++       +    F  +  N+S E+FI+K+L++ L V+ +  G  F  GK ++G+  
Sbjct: 90  CQLINNFNIDYVYMDNF-EDVKNFSPEEFIEKILIQKLNVREIYCGFNFTLGKGKSGNVR 148

Query: 139 ILQKRGEKYGFHTVFI---DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           I++    +   +++ +     + +++++I+SS+ IR  + K  +  A  LLG+ F I  +
Sbjct: 149 IMENILREKYNNSIVLNIQPSILDDENEIISSTRIRKYIQKSDLSKAKELLGHNFIIMGE 208

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTMVPNG 254
           V+HG+K+GRTLGFPTAN+     I  + GVY +      D   Y G+ N G+NPT+  + 
Sbjct: 209 VVHGKKLGRTLGFPTANLTFENRIYPELGVYGVYVHIEGDSNIYHGIMNIGKNPTVKSDS 268

Query: 255 PLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            LL +E+ IFDF Q+IYG+   +   + +  E K   +E+L   + ++    RK ++  Y
Sbjct: 269 LLLNVETNIFDFEQDIYGKIILIEVLEKVGKEKKLNSLEELIQKISDNVSNWRKRIDEKY 328

Query: 314 PLSERDR 320
               ++R
Sbjct: 329 HNKNKNR 335


>gi|331701352|ref|YP_004398311.1| riboflavin biosynthesis protein RibF [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128695|gb|AEB73248.1| riboflavin biosynthesis protein RibF [Lactobacillus buchneri NRRL
           B-30929]
          Length = 318

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 144/316 (45%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +                 VVA+G FDG H GH  +L++A        + + VL+++ H
Sbjct: 1   MQISRLHYPLSDDFKVDGPTVVAMGFFDGFHKGHQAVLQRAKTEAEKRGAKLAVLTYDHH 60

Query: 59  PRTIIQSSSPI--FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +  SP     L+    + ++L   G   +    ++ +  + + E+FI    ++  
Sbjct: 61  PAIVYRKMSPHEQRYLTLNDYKMQLLRDFGVDQVFLVNYSYDFQSQTPEEFINN-FLKRF 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ G    +G  +        K  +   F  + +  +  N  + VSS+ IR  L  
Sbjct: 120 NAVAVVAGFDHTYGDKKVATMANFPKFVKG-AFDVITVPSVDIND-KKVSSTRIRIELDS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ 235
           G V +   LLG  F     ++HGE+ GR LG+PTAN++ S    L   G+Y +     D 
Sbjct: 178 GDVDSVTKLLGRPFQTRGVIVHGEERGRLLGYPTANVEHSEYQWLPTIGIYVVTVEIAD- 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T     P+ +E  + DF + IYG+   V++  YLR EIKF+  E L 
Sbjct: 237 KKYLGMASIGKNVTFSDVHPMTVEINLMDFDRNIYGEVVNVNWLSYLRAEIKFQTPEDLI 296

Query: 296 IYMGEDEKKARKILES 311
             + +D+   R+ LE 
Sbjct: 297 DQLDKDKVATREYLEQ 312


>gi|262370953|ref|ZP_06064276.1| riboflavin kinase [Acinetobacter johnsonii SH046]
 gi|262314029|gb|EEY95073.1| riboflavin kinase [Acinetobacter johnsonii SH046]
          Length = 333

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 30/315 (9%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
              L+   V IGNFDG+HLGH  ++ Q   ++   N    V+ F P P    +       
Sbjct: 12  NTQLEKTAVTIGNFDGVHLGHQAMIHQLKAVSKQQNLKTVVMIFEPQPLEFFKGYDAPPR 71

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +S    + + L ++G   +   KF     + SAEQF   +L E L  ++++ G  F FGK
Sbjct: 72  ISSLREKVEYLTELGVDYIAVAKFDNSFRSLSAEQFAD-ILKEKLNAQSLVLGDDFHFGK 130

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R G+   L    E YGF    ++ +   + + VSS+ IR  L  G +  AA LLG  ++
Sbjct: 131 NRQGNSEFL----ENYGFQIHNLETILA-EGERVSSTRIRQTLAAGDLALAAQLLGRPYS 185

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ------------------ 233
           I   V +G++IGRTL FPT N++L+       G+Y +    +                  
Sbjct: 186 ITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVDVMCETTSLRDKVKADHPNRLGV 245

Query: 234 ---DQTSYSGVANFGRNPTMVPNGP-LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              D ++  G  + G  P +    P   LE    D S  +YG    V+F +YL  E  + 
Sbjct: 246 AGYDHSALFGAGHVGTRPAIQQAQPEWRLEVHFPDVSANLYGLLMRVTFLNYLHGEKNYP 305

Query: 290 DIEKLKIYMGEDEKK 304
            +E LK  + +D  K
Sbjct: 306 SLEALKAGIDDDVVK 320


>gi|299136492|ref|ZP_07029675.1| FAD synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601007|gb|EFI57162.1| FAD synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 322

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 12/316 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  ++    S P+     VV+IGNFDG+H GH +++   I  A        V++F+PH
Sbjct: 1   MQIVRSLAELNSFPS---PSVVSIGNFDGVHCGHRMVVASVIARAREIGARAAVVTFDPH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  I+ ++S +  ++P + + ++L++ G    +   FT E   ++A QF ++VL + L+ 
Sbjct: 58  PAHILHNTSRLPLITPLAEKLELLDQTGVDLALVLPFTEELRLWTARQFAERVLRDGLQA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             V  G  FRFG         L + G + GF     +     +   VSSS IRT ++ G 
Sbjct: 118 VEVHEGETFRFGHRAEAGIDSLSQIGRELGFLVRAYEPY-ILRGAAVSSSRIRTLVSTGE 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS- 237
           +  A  LLG  F+I S    G   G     PT N+    D+L   GVY    R       
Sbjct: 177 LPQARALLGRSFSIHSTPASGRGYGTRYTVPTVNLAPYGDLLPAHGVYITTLRVGTGDQA 236

Query: 238 --YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIEK 293
             + GV N G  PT   +    +E+ + DF      +     ++F   LR E +F + E 
Sbjct: 237 RVFRGVTNAGNRPTFGADS-FAVETHLLDFEPIDLDETSPLEMTFLYRLRGEQRFPNPEA 295

Query: 294 LKIYMGEDEKKARKIL 309
           L+  +G D ++A++  
Sbjct: 296 LRAQIGLDVRRAQRYF 311


>gi|322391870|ref|ZP_08065335.1| riboflavin biosynthesis protein RibF [Streptococcus peroris ATCC
           700780]
 gi|321145350|gb|EFX40746.1| riboflavin biosynthesis protein RibF [Streptococcus peroris ATCC
           700780]
          Length = 313

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPH 58
           M V   I+  + +    +  V+ +G FDGIHLGH  +   A KIA    ++V  ++F+  
Sbjct: 11  MIVTIPIKTEKDIATP-EPTVLVLGYFDGIHLGHQKLFSIAGKIAEEKRLSVALITFHES 69

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++  SP  +  +  P  +E+  ++ G   L    F+   AN +A++F+    V+ +
Sbjct: 70  PKLTLKPYSPENLLHILNPDERERKFKRAGVENLYLMDFSSRVANMTAQEFVDT-FVKEV 128

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +  T++ G  +  G DR      L++  +              ++   +SS+ IR A+ +
Sbjct: 129 KADTIVVGFDYSLGTDRK-SAEDLKEIFDGEVVVVPP----VEDEKGKISSTRIRQAILE 183

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    + +
Sbjct: 184 GDVKEAGQLLGSPLPTRGIVVHGNARGRTIGYPTANLVLLDRTYMPADGVYTVDIEIK-R 242

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T         E  IFDF ++IYG+  TV + D +R  +KF  +EKL 
Sbjct: 243 KLYRGMASVGKNVTFDGEEERF-EVNIFDFDEDIYGETVTVYWLDRIRDMVKFDSVEKLV 301

Query: 296 IYMGEDEKKARK 307
             + ED+K A+K
Sbjct: 302 KQLEEDKKVAQK 313


>gi|283769351|ref|ZP_06342250.1| riboflavin biosynthesis protein RibF [Bulleidia extructa W1219]
 gi|283104008|gb|EFC05392.1| riboflavin biosynthesis protein RibF [Bulleidia extructa W1219]
          Length = 305

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 9/284 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IG FDG+H GH  ++++ +++A        ++SF P PR +I+  S    +   S +
Sbjct: 19  VACIGYFDGLHRGHQALVQKTLEVAKQMKAVPTMISFEPDPRVVIKGISNFKHIMTMSDR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + EK+G    +   FT E A    + FI ++ +  L +K ++ G  F FG+   GD  
Sbjct: 79  FSLAEKLGIEKFVLLDFTKEMAALKPQAFIDQI-LGQLHLKGLVCGFDFHFGQYGQGDYH 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ   ++  +    ID++ + + + +SS+ I  A+ KG +    HLLG  ++ E  VIH
Sbjct: 138 FLQ---KQCDYPVFRIDKVEDQQGK-ISSTRIGKAIQKGRMEEVNHLLGREYSSEGRVIH 193

Query: 199 GEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   G +L FPTAN+  S + IL K GVY              + N G NP++     L 
Sbjct: 194 GLHNGHSLHFPTANIDYSEELILPKVGVYGGYVLLDGIKKLC-MINLGHNPSVQYQKRLS 252

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           LE  I D+  ++Y Q   + +  +LR EI F   E+L   + +D
Sbjct: 253 LEVHILDYKGDLYDQTVRIYWLGFLRDEIHFSSKEELIQQLKKD 296


>gi|257791554|ref|YP_003182160.1| riboflavin biosynthesis protein RibF [Eggerthella lenta DSM 2243]
 gi|325833205|ref|ZP_08165711.1| riboflavin biosynthesis protein RibF [Eggerthella sp. HGA1]
 gi|257475451|gb|ACV55771.1| riboflavin biosynthesis protein RibF [Eggerthella lenta DSM 2243]
 gi|325485587|gb|EGC88055.1| riboflavin biosynthesis protein RibF [Eggerthella sp. HGA1]
          Length = 307

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 7/296 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
            KG   A G FDG+H GH  +L+ A             L+F+  P  +    + +  L  
Sbjct: 16  FKGTSCAFGVFDGVHRGHRYLLDCARSTAAETGGASVALTFDIDPDEVFHP-TRLKKLMT 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + ++L   G   +    FT + A  S E+F+ +   +      +  G  F+FG   A
Sbjct: 75  NEERVRMLADSGVDVVAVLPFTRDFAASSPEEFLVQTF-DGTVPSFLHVGYDFKFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L       G  +V   +L+++    ++++ IR  L  G V  A  LLG  + +  
Sbjct: 134 GTVRDLDS-WAAVGGTSVQAHDLKSDDGAPITATRIRLLLAGGDVEEANRLLGRPYFMTG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V  G   G  +GF TAN+ +   +    +GVYA      D   Y    N G   T    
Sbjct: 193 VVEPGRGEGADMGFRTANLVVPDQMRPLGDGVYAAYAHV-DGVRYKAAVNVGVAATFADR 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                E  + DFS ++YG+   V F  +LRP  KF D+++L   +  +    R+ L
Sbjct: 252 ATATCEVHLLDFSGDLYGKPVKVEFLYWLRPMRKFDDLDELIATVKGNIAWVRENL 307


>gi|291546825|emb|CBL19933.1| riboflavin kinase/FMN adenylyltransferase [Ruminococcus sp. SR1/5]
          Length = 299

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           ++I+   P  L    V +G FDGIH GH  ++E+ ++       TVL             
Sbjct: 4   LKIDGEFP-RLSKSAVTLGKFDGIHRGHQKLVEKILEQKEKGLQTVL---------FSLG 53

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +     + ++LEK G   LI         +  AE F++++LV  L+ + V  G  
Sbjct: 54  IGSQMIFTKEERCQLLEKAGVDVLIECPLDNRIRHMKAETFVKEILVGDLQAEHVAVGED 113

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG +R G   +L+  G K GF    + +      + +SS+ IR  L KG++     LL
Sbjct: 114 FRFGYERKGTPQLLETMGRKLGFTVDVVPK-EMEGRRKISSTFIREELKKGNMEKVNDLL 172

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFG 245
           G  F ++  + HG  +G  +  PT N+  + + L    GVY      +D+T   G+ N G
Sbjct: 173 GIPFFVDGVIEHGRGMGHKVLLPTTNIVPAKEKLMPPNGVYDTVSHFKDRT-LCGITNVG 231

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+     L +E+++FD  +++YG+ C V FF Y RPE +F  IE LK  + +D +K 
Sbjct: 232 YKPTIGE-KFLGVETYLFDCEEDLYGEPCRVEFFHYSRPEKRFSSIEALKQQLLKDAEKG 290

Query: 306 RKILES 311
           +    S
Sbjct: 291 KAYFRS 296


>gi|160915127|ref|ZP_02077340.1| hypothetical protein EUBDOL_01135 [Eubacterium dolichum DSM 3991]
 gi|158432926|gb|EDP11215.1| hypothetical protein EUBDOL_01135 [Eubacterium dolichum DSM 3991]
          Length = 319

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 11/314 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M + H  ++   +       V  IG FDG+H+GH  ++   +  A   N+   +++F P 
Sbjct: 6   MEIIH-FDLRHPIQPDT-PLVACIGYFDGLHVGHRQLITHVLAHAKAQNAKPALITFEPD 63

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +I+    +  L+P   + +I E++G    I   F  +      E F  +++++ L++
Sbjct: 64  PWAVIKQMDDLEHLTPMHKRIEIAEELGIETWIILTFEKDMQQLRVEDF-HELVLKPLKL 122

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           KT++ G  F +G    G+   L    +K  + TV +    ++ ++ +SSS I   L +G+
Sbjct: 123 KTLVCGYDFHYGYRGEGNSESL----KKQPYFTVDVVAQVSSDAKKISSSRIEELLRQGN 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +  A   L   + +E  V+ G + GR  GFPTAN++LS   ++   GVY    + Q    
Sbjct: 179 IEQANVFLQRPYELEGIVVKGNQFGRRYGFPTANLKLSYRYVIPAGGVYIGEVKVQG-RW 237

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N G NPT      + +E+ + DF   IY QR    F  YLR E KF D + L+  
Sbjct: 238 YEAIINIGHNPTYNYQKNISIEAHLLDFDTTIYEQRVIFRFLSYLRKEEKFSDAQALQRQ 297

Query: 298 MGEDEKKARKILES 311
           + +D++ ARK  + 
Sbjct: 298 LAQDKQVARKYFQE 311


>gi|322516810|ref|ZP_08069712.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           ATCC 49124]
 gi|322124647|gb|EFX96111.1| riboflavin biosynthesis protein RibF [Streptococcus vestibularis
           ATCC 49124]
          Length = 303

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  +I   + + +  K  V+ +G FD +H GH ++ ++A +I       + VL+FN  
Sbjct: 1   MKIT-SINDYKDI-HQDKETVLVLGYFDALHRGHKVLFDKARQIADDKQLEVAVLTFNES 58

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+   Q      +  ++ P  +  + E  G   L    F  + A  S++ FI +  ++ L
Sbjct: 59  PQLTFQRYTDDLLLHITAPQRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIARY-IKRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + + V+ G  ++FG  R  D   L +         V + E + +  + +SS+ +R  + +
Sbjct: 118 KAQEVVVGFDYKFGHHRT-DADYLARNFSGR----VHVIEEQQSDGEKISSTRVRQLIRE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +    L   GVY +     D 
Sbjct: 173 GKVKEANYLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTYLPAYGVY-VADVVIDG 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I+ L 
Sbjct: 232 KRYRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDDLC 290

Query: 296 IYMGEDEKKARKI 308
             +  D+K A K 
Sbjct: 291 NQLEADKKIAEKF 303


>gi|288574925|ref|ZP_06393282.1| riboflavin biosynthesis protein RibF [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570666|gb|EFC92223.1| riboflavin biosynthesis protein RibF [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 322

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 89/298 (29%), Positives = 140/298 (46%), Gaps = 7/298 (2%)

Query: 21  VVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +G FDG HLGH  +     A+    +    V+SF PHP+T++     +  L     +
Sbjct: 2   IVVLGAFDGYHLGHQRLFSVASAMAERESCGWAVVSFTPHPKTVLMHER-VSLLFTEEEK 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             + E +    +I++ FT   ++   E F   +  E + V  V+ G  FRFG++R GD  
Sbjct: 61  VLLREILSIPTMIQFPFTSRLSSMDPEDFFSYMDKE-IGVSGVVVGDNFRFGRERRGDVD 119

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +     G     +  +  + S  VSS++IR  ++ G +  A+  LGY F +   VI 
Sbjct: 120 TLSEICRGKGIPFSSVLPVTIDGSV-VSSTSIRDLISMGKISEASTRLGYPFFMRGHVIE 178

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G + GR +G PTAN+      I+ K GVYA      D        + G NPT        
Sbjct: 179 GSRRGRKIGVPTANLSFPSTKIIPKPGVYAG-AAYLDGEWCPAAISIGNNPTFGDISENR 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           +E  I D ++++Y Q   V FF+ LR E +F D E+L   + +D K+ + I      L
Sbjct: 238 VEVHIIDKNEDLYDQTLYVLFFERLRSERRFLDPERLVSQLKDDIKRTKGIFGCKTDL 295


>gi|68304940|gb|AAY89951.1| predicted riboflavin biosynthesis protein [uncultured bacterium
           BAC13K9BAC]
          Length = 305

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 13/307 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M++   IE     P      VV IGNFDGIH GH  ++++  +I++  N    + +FN  
Sbjct: 1   MNIIEKIENISDKPK-----VVTIGNFDGIHKGHQSLIKKTQEISHAENLESIIFTFNML 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  + + S+    +    ++   ++    + ++   F  +  + SA  F +++L++ L  
Sbjct: 56  PEEVFEQSN-FQRIYNNELKFDYIKAHEINTILSINFN-DIKDLSASFFCEEILIKKLIT 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F+FGK R G+   L++      FH   I EL    ++ +SS+ +R  L  G 
Sbjct: 114 KYLVIGKNFKFGKGREGNIDKLKEYHNSGDFHL-IIPELEQYDNEHISSTRVRKLLKDGK 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
             +  + LG  + +   V  GE++GR LG+PTAN+ L  D    +GVY  +    D   Y
Sbjct: 173 FSDVKNCLGREYMLRGTVTTGEQLGRKLGYPTANISLDYDY-PLDGVYLSKVYV-DGVFY 230

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+A+ G  PT       +LE FI +F+Q+IY +   V F + +R +IKF   ++L   M
Sbjct: 231 HGLASVGNKPTYN-GKEKILEVFILNFNQDIYNKEVEVYFLEMIRNQIKFDSQDELIKQM 289

Query: 299 GEDEKKA 305
            ED K A
Sbjct: 290 NEDHKYA 296


>gi|322387776|ref|ZP_08061385.1| riboflavin biosynthesis protein RibF [Streptococcus infantis ATCC
           700779]
 gi|321141643|gb|EFX37139.1| riboflavin biosynthesis protein RibF [Streptococcus infantis ATCC
           700779]
          Length = 305

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 151/312 (48%), Gaps = 14/312 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V   I+  + +       V+ +G FDGIHLGH  +   A  I       + +++F+  
Sbjct: 3   MIVTIPIKTEKDIATP-GSTVLVLGYFDGIHLGHQKLFSIAGEIAAKKRLSVALITFHES 61

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++  SP  +  +     +E+  ++ G   L    F+   AN +A++F+    V+ +
Sbjct: 62  PKLTLKPYSPENLLHILNAEERERKFKRAGVENLYLMDFSSRIANMTAQEFVDT-FVKEV 120

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +  T++ G  +  G DR      L++  +              ++   +SS+ IR A+ +
Sbjct: 121 KADTIVVGFDYSLGSDRK-SAEDLKEIFDGEVVVVPP----VEDEKGKISSTRIRQAILE 175

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    + +
Sbjct: 176 GNVKEAGQLLGSPLPTRGIVVHGNARGRTIGYPTANLVLLDRTYMPADGVYTVDIEIK-R 234

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T         E  IFDF ++IYG+  TV + D +R  +KF  IE+L 
Sbjct: 235 KLYRGMASVGKNVTFDGEEERF-EVNIFDFDEDIYGETVTVYWLDRIRDMVKFDGIEQLV 293

Query: 296 IYMGEDEKKARK 307
             + EDEK ARK
Sbjct: 294 KQLEEDEKAARK 305


>gi|225016943|ref|ZP_03706135.1| hypothetical protein CLOSTMETH_00858 [Clostridium methylpentosum
           DSM 5476]
 gi|224950337|gb|EEG31546.1| hypothetical protein CLOSTMETH_00858 [Clostridium methylpentosum
           DSM 5476]
          Length = 311

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 99/300 (33%), Positives = 152/300 (50%), Gaps = 6/300 (2%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK-IANNSPITVLSFNPHPRTIIQ 64
            ++I   L    +   VA+G FDG+H GH  ++ QA++         VLSF      I  
Sbjct: 2   RLKILHKLEPMEREISVALGLFDGVHQGHRSVIAQAVEGAGEELLPVVLSFRTQ-HAIPA 60

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           S     T+   ++++ IL  +G   LI   F L+  +Y+AE F++++L+  L  K ++ G
Sbjct: 61  SKKGYSTIITDTVKQSILTGLGVRLLIEPDF-LDIKDYTAEVFVREILINRLRAKQIVCG 119

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             +RFGK  AG   +LQ  G +YG     +  L +   + VSS+ IR  + +G +  A  
Sbjct: 120 YDYRFGKGAAGSVELLQALGAQYGAEVTVMPPLLD-GGEPVSSTRIRRCIEQGEIEQANR 178

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVAN 243
           LLGY +  +  VI G K+GRT+G PT N    P+ ++ K GVYA          Y GV N
Sbjct: 179 LLGYDYCFDFPVIDGAKLGRTIGVPTINQMFKPEFLIPKFGVYASYMTI-GHRKYWGVTN 237

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G  PT+      L E+ I  FS ++Y +R  V   +YLR E +F  I +LK  + E+ +
Sbjct: 238 VGIKPTVHNTSFPLAETHIIGFSGDLYKKRIKVHLVEYLRSEQRFSGIPELKKAIQENIR 297


>gi|289670398|ref|ZP_06491473.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 281

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 3/263 (1%)

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
            P PR     ++P   L+    + + L   G  ++   +F    +  SAE F++  LV  
Sbjct: 4   EPLPREFFAPAAPPPRLTLARAKIEGLYGFGADSVGMIRFDGRLSKMSAEDFVRLALVGR 63

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  + V  G +FRFG  R GD  +L   GE++GF    I  +  +  + +S++ IR  L 
Sbjct: 64  LCAREVWIGPEFRFGHRRGGDIRLLHMLGEQHGFVAGEIAPVHLH-GERISATRIRELLV 122

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G   +A  LLG  + I   V+ G+++GR+LG+PTAN++  P      G+YA       +
Sbjct: 123 AGEFAHAGDLLGRPYAIGGRVVRGKQLGRSLGYPTANLRF-PRTPALSGIYATWVHGVAK 181

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T +  V++FG  PT+    P LLE+ +FDF  ++YG+   V F   LR E KF  +E L 
Sbjct: 182 TPWPSVSSFGTRPTVAGVEP-LLEAHLFDFQGDLYGRHIDVEFVAKLRDEEKFDGLEALT 240

Query: 296 IYMGEDEKKARKILESSYPLSER 318
           + M  D  +AR++L +     ++
Sbjct: 241 VQMHRDAGQAREVLAAQANSQQQ 263


>gi|294994121|ref|ZP_06799812.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Mycobacterium tuberculosis 210]
          Length = 291

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 17/291 (5%)

Query: 37  ILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
           ++  A+K   A   P  +++F+PHP  ++   S    L+  + + ++++ +G    +   
Sbjct: 1   MIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMP 60

Query: 95  FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF- 153
           FT +    + ++FI ++LVE L V  V+ G  F FGK  AG+   L++ GE++GF     
Sbjct: 61  FTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESM 120

Query: 154 --IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
             + E  +N++   SS+ IR+ +  G ++ A   LG    +E  V+ GE  G  LGFPTA
Sbjct: 121 SLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTA 180

Query: 212 NMQLSPD-ILLKEGVYAIRFRTQDQ----------TSYSGVANFGRNPTMVPNGPLLLES 260
           N+       +  +GVYA  F                 Y    + G NPT        +E+
Sbjct: 181 NVAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTF-SGRTRTVEA 239

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F+ D + ++YGQ   + F   +R + KF+ + +L   MG D ++AR +L +
Sbjct: 240 FVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLST 290


>gi|88608739|ref|YP_505942.1| riboflavin biosynthesis protein RibF [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600908|gb|ABD46376.1| riboflavin biosynthesis protein RibF [Neorickettsia sennetsu str.
           Miyayama]
          Length = 303

 Score =  258 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 16/316 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M V+H  E+   LP+     VV  GNFDG+HLGH  +L     ++  + +   V++F+PH
Sbjct: 1   MQVYHTPEL---LPH---PSVVTFGNFDGVHLGHLALLSALSGVSKLADLHRVVITFDPH 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   ++     F ++    +  +L      +L   KF  E  + S E F++ +   +L +
Sbjct: 55  PFCFLKRKKD-FLITDQYTKTVLLSPY-ADSLYFIKFDDELRSLSPEDFLKFLS-SFLNL 111

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I     RFGK  +G    ++K  E   +  V I    N+     SS+ +RT++  G 
Sbjct: 112 KYLINAENCRFGKFSSGGIAEIEKYQELLSYKAVVIKPELNDSGSRYSSTLVRTSIKDGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS 237
           +L+A  LLG   +I   +     +  T+GFPT N+ +  +I+  + GVY +    +  T 
Sbjct: 172 MLSARQLLGRYHSIRGIIRRDRGLASTIGFPTINIAIPEEIIKPRLGVYVVDVSIEG-TI 230

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + G+AN G+ PT   +G ++LE  IF+FS  +YG+  TV    +LR E  F  +E+L+  
Sbjct: 231 HRGIANIGKRPTTSGSGEVILEVHIFNFSDNVYGKDATVYLKAFLREEKLFPSVERLREQ 290

Query: 298 MGEDEKKARKILESSY 313
           +  D    R +L  ++
Sbjct: 291 ILADI---RAVLSMNF 303


>gi|71901179|ref|ZP_00683283.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
 gi|71729061|gb|EAO31188.1| Riboflavin kinase / FAD synthetase [Xylella fastidiosa Ann-1]
          Length = 261

 Score =  258 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 87/257 (33%), Positives = 138/257 (53%), Gaps = 3/257 (1%)

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F P PR    S++P   L+    + + L + G  ++   +F    A+ S + F+++VL+ 
Sbjct: 1   FEPLPREYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLG 60

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ V+ G +FRFG  R+GD  +LQ+ G ++GF    I  L  N  + +S++ IR  L
Sbjct: 61  RLGVREVLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNER-ISATKIRALL 119

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             G   +AA LLG  + I   V+ G+++G TLG+PTAN++    I L  G+YA       
Sbjct: 120 AAGDFAHAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIAL-SGIYATWVHGIF 178

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           +  +  V++FG  PT+    P LLE  +FDF  ++YG+R  V F   LR E  F D+  +
Sbjct: 179 EQPWPSVSSFGTRPTVAGVEP-LLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTM 237

Query: 295 KIYMGEDEKKARKILES 311
              +  D ++AR IL  
Sbjct: 238 TTQIHRDAQQARHILSE 254


>gi|270289177|ref|ZP_06195479.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Weiss]
          Length = 298

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + +++     LP+      + IG FDG HLGH  +L    +        V++F+ HP+
Sbjct: 4   MDLSYSL-----LPSSDPIESITIGFFDGCHLGHQALLSSLKQFP--GKSGVITFSEHPK 56

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L       L    F  E AN  AE FI  +  E L    
Sbjct: 57  HTL-SNSPPETITSLEERIQLLTNCHIDYLAILPFNQEIANEEAEMFILSLY-ESLHPSR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   R G+   G+   L+      G     I  L  N   IVSS  IR  L +G +L
Sbjct: 115 IIFGYDSRLGRGGLGNAQTLKPFASSLGISLEEIPPLSIN-GTIVSSRKIRQFLREGDLL 173

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V  G+ IG +LG+ T N+ L+  +L   GVY+   +   + SY G
Sbjct: 174 SAEKFLGRPFSYTGTVTRGQGIGSSLGYATINLNLTRSLLPL-GVYSCSIKI-GRESYLG 231

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PT+  N  L LE+ I D S ++Y QR TV    +LR E  F   ++L + + E
Sbjct: 232 VMNLGMAPTVQRN-QLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQE 290

Query: 301 DEKKAR 306
           D +KAR
Sbjct: 291 DIRKAR 296


>gi|15834987|ref|NP_296746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Nigg]
 gi|270285156|ref|ZP_06194550.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum Nigg]
 gi|301336551|ref|ZP_07224753.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Chlamydia
           muridarum MopnTet14]
 gi|8163211|gb|AAF73550.1| riboflavin kinase/FMN adenylyltransferase [Chlamydia muridarum
           Nigg]
          Length = 295

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + +++     LP+      + IG FDG HLGH  +L    +        V++F+ HP+
Sbjct: 1   MDLSYSL-----LPSSDPIESITIGFFDGCHLGHQALLSSLKQFP--GKSGVITFSEHPK 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             + S+SP  T++    + ++L       L    F  E AN  AE FI  +  E L    
Sbjct: 54  HTL-SNSPPETITSLEERIQLLTNCHIDYLAILPFNQEIANEEAEMFILSLY-ESLHPSR 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +I G   R G+   G+   L+      G     I  L  N   IVSS  IR  L +G +L
Sbjct: 112 IIFGYDSRLGRGGLGNAQTLKPFASSLGISLEEIPPLSIN-GTIVSSRKIRQFLREGDLL 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A   LG  F+    V  G+ IG +LG+ T N+ L+  +L   GVY+   +   + SY G
Sbjct: 171 SAEKFLGRPFSYTGTVTRGQGIGSSLGYATINLNLTRSLLPL-GVYSCSIKI-GRESYLG 228

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V N G  PT+  N  L LE+ I D S ++Y QR TV    +LR E  F   ++L + + E
Sbjct: 229 VMNLGMAPTVQRN-QLCLEAHILDLSADLYEQRVTVIPKQFLREEKTFSSQKELALAIQE 287

Query: 301 DEKKAR 306
           D +KAR
Sbjct: 288 DIRKAR 293


>gi|328479997|gb|EGF49026.1| riboflavin biosynthesis protein ribF [Lactobacillus rhamnosus MTCC
           5462]
          Length = 297

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 13/303 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V       Q+     +  V+ +G FDG+H GH  +++   ++A          +    
Sbjct: 1   MKVIDIQPPLQASATPPQPIVLTLGFFDGVHRGHQAVIQAGKRVALRKKTATCCDD--YL 58

Query: 61  TIIQSS------SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
             I+ S         F +   + +  ++++ G   L    FT   A  S + F+   LV 
Sbjct: 59  ICIRRSCTVALPKLPFDIYRHAKKIALMQQFGVDLLYFVHFTPAFAALSPQAFVDDYLV- 117

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   V+ G  + +GK    +  +L +      F  V + +L  +  + +SS+ IR AL
Sbjct: 118 GLKAAAVVAGFDYTYGKRAVANMALLPEYARGR-FEVVSVPKLAED-GKKISSTRIRDAL 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQ 233
            +G +  A  LLGY +     V+HGE  GR LGFPT N+  L    L   G+YA+  +  
Sbjct: 176 DRGDIDTANELLGYVYLTTGKVVHGEARGRLLGFPTINLTTLGQQRLPGIGIYAVTVKVD 235

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
           D T Y G+A+ GRN T   +  + LE  + DF+Q IYG+   V ++ YLR E+KF   + 
Sbjct: 236 D-TWYLGMASIGRNVTFGDDRAITLEINLLDFNQMIYGKTVQVRWYHYLRGEVKFSGADA 294

Query: 294 LKI 296
           L  
Sbjct: 295 LIA 297


>gi|195978033|ref|YP_002123277.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974738|gb|ACG62264.1| riboflavin biosynthesis protein RibC [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 310

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M + H I+  Q + +     V+ +G FDG+H GH  + ++A +I+      I  L+F+  
Sbjct: 1   MDIQH-IKSYQEI-DESADTVLVLGYFDGLHRGHKALFDKAKEISRQESLKIVTLTFHES 58

Query: 59  PRTIIQSSSPIFT--LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP F   ++ P  + +   + G   L    FT   +  S++ FI    +  L
Sbjct: 59  PQLAFTRFSPDFLQHITYPEKRYEKFAEYGVDKLYLLDFTTSFSKLSSDDFIDHY-IGRL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + ++ G  ++FG D A D   L KR +        I E++ ++   +SS+ IR+ +  
Sbjct: 118 RARHIVVGFDYQFGCDHA-DSHYLAKRIKG---TVYSISEVKEDQ-IKISSTRIRSLIKA 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G V  A  LLGY  +    V+HG+  GRT+GF TAN+  +    L  +GVY      +  
Sbjct: 173 GDVAKANQLLGYELSTRGMVVHGDARGRTIGFSTANLAPIDRTYLPADGVYVTDVLVRG- 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE+ IF F+++IYG+   + + D +R   KF D+    
Sbjct: 232 ERYRSMTSIGKNITF-GGKELRLEANIFGFNEDIYGETLEIIWLDRIREMTKFSDVSTFI 290

Query: 296 IYMGEDEKKARKI 308
             + +D++ A   
Sbjct: 291 HQLKQDKEAAINW 303


>gi|217076700|ref|YP_002334416.1| riboflavin biosynthesis protein RibF [Thermosipho africanus TCF52B]
 gi|217036553|gb|ACJ75075.1| riboflavin biosynthesis protein RibF [Thermosipho africanus TCF52B]
          Length = 289

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 18/298 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT----VLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV +G FDG+H GH  IL     ++     +     + F   P      +     +S   
Sbjct: 3   VVTVGVFDGVHKGHQEILNSLKNLSKEYNASPEIYTIVF---PMEYYTGNFDGLLIS-LE 58

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +LE  G    +      E  + S   F   +  +    K ++ G  FRFGK+ AG+
Sbjct: 59  DRITLLEMYGNVYTLNL---QEIKDLSPYDFFDFISKDT---KAIVVGQDFRFGKNAAGN 112

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+   ++   +   + +L  +  + VSS+ IR  L +G++  A +LLG  + I   V
Sbjct: 113 VNLLENLSKEKNINLKVVADLIID-GKRVSSTLIRKLLKEGNIQKANYLLGRNYPIYGKV 171

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              +++GR LGFPTAN++ S +++  K GVY  +  T     + G+ N G  PT+     
Sbjct: 172 YKDKQLGRKLGFPTANIRRSKELITPKFGVYLCKVYTP--KLHFGLMNIGLRPTVEKTKS 229

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           +  E +I DF++++YG+   V   ++LR E  F+ I+ L   M  DEK ARK+LE  Y
Sbjct: 230 VKYEVYILDFNEDLYGKEIRVELLEFLREETTFESIDALIEQMKNDEKTARKLLEEKY 287


>gi|32491044|ref|NP_871298.1| hypothetical protein WGLp295 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166250|dbj|BAC24441.1| ribF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 320

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/311 (29%), Positives = 143/311 (45%), Gaps = 5/311 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M   H   I      ++ G V+ IGNFDG+HLGH  I+ +     +  N P+ V+ F P 
Sbjct: 1   MKFKHIRNIFNLKKQYINGCVITIGNFDGVHLGHQKIISKLKNESLKRNLPMIVVIFEPQ 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+  I  +SP   ++    + K  +KMG   ++   F       +A+ FI+  L++ L +
Sbjct: 61  PKEFINKNSP-SRITGLRDKIKYFKKMGIKQVLCINFNKNFLMLNAKDFIKNFLIKSLNM 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +I G  FRFG    GD  +L+  G+K GF+ + +  L  + S+ +SS+ IR AL    
Sbjct: 120 KCIIIGKDFRFGYKAYGDVKLLKNSGKKLGFNVLEVKTLEID-SEKISSTAIRNALKNNK 178

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A   LG+ ++I   V+ G+ IGR +GFPT N+          GVYA+      +   
Sbjct: 179 LEKAIKFLGHEYSISGRVVCGKAIGRLIGFPTINISSKNIKFPINGVYAVEVNGITKKII 238

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            G+AN G  PT        +E  + + S   Y     +     +R E  F+    LK  +
Sbjct: 239 YGIANIGTRPTFFGLNQ-KVEVHLLNKSGNFYSCHIEIIIRKKIREERFFRSTFDLKNQI 297

Query: 299 GEDEKKARKIL 309
             D  K     
Sbjct: 298 LYDINKVNDYF 308


>gi|169334793|ref|ZP_02861986.1| hypothetical protein ANASTE_01199 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257531|gb|EDS71497.1| hypothetical protein ANASTE_01199 [Anaerofustis stercorihominis DSM
           17244]
          Length = 304

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 156/311 (50%), Gaps = 13/311 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + H+ +      +  +   +A G FDGIHLGH  I+E+  K   N    V++F+ HP 
Sbjct: 1   MKIVHSFDAV----DKNEPLSLAFGYFDGIHLGHRKIIEENNKDLKN---CVVTFDKHPM 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +I        L     +E  LEKMG   L    F     N +  QFI  ++++ + +K 
Sbjct: 54  DLINKDKSPKMLMTMEEKEGYLEKMGVDYLFIIHFDSNFMNLTDRQFI-SLVIDNVNMKK 112

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +  G  + FGK+  G+   L+K  ++ GF    +DE + +  + V S+ IR  + +G++ 
Sbjct: 113 MKVGFNYHFGKNGRGNADFLRKVSKEEGFELEVVDEYKIDDER-VCSTAIRNLIYEGNIS 171

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYS 239
            A   LG  ++I   V+ G+ +G+ +G PTAN+   P   + K GVY  R    D+  Y 
Sbjct: 172 KANKFLGRPYSITGKVVEGKHLGKQIGIPTANIFPDPVKAIPKRGVYVTRVTIDDEIYY- 230

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           G++N G NPT   N    +E+ IFDF  +IYG+   V F ++ R E  F+ I++LK  + 
Sbjct: 231 GISNVGINPTF--NEEPKVETNIFDFDGDIYGKEIKVEFLEFEREERAFESIDELKKTIE 288

Query: 300 EDEKKARKILE 310
           +  K  R  + 
Sbjct: 289 KSIKFGRDYIA 299


>gi|295112225|emb|CBL28975.1| riboflavin kinase/FMN adenylyltransferase/tRNA pseudouridine 55
           synthase [Synergistetes bacterium SGP1]
          Length = 639

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 8/304 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ 64
           ++     P   +G + AIG FDG H GH  +LE+A  +A   +     ++F PHP   + 
Sbjct: 302 LQDGAERPAVARGPIFAIGAFDGFHRGHARLLERARDLAALLDEDWGAVTFEPHPGVFLG 361

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
                 TL     +E I   +    L+   F  E  + S   F +++      V  V+ G
Sbjct: 362 KLDA--TLFTLRERELIRRVLRVPRLLVLNFDEEVRDLSPSDFWRRLR-GTFPVGGVVVG 418

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             FRFG+ + G    L       G     + EL       +SS+ +R A+ +G    AA 
Sbjct: 419 RNFRFGRGQEGTAEALISLCRDDGLPAEAV-ELLTCGGLRLSSTEVRRAVMEGDAALAAK 477

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVAN 243
           +LG+ +     V+HG+  G  LGFPTAN+ LS  +    EGVYA          + G  +
Sbjct: 478 VLGFPWFFWGAVVHGDWRGHELGFPTANVDLSKALTRPGEGVYAALVPIGG-RWHCGALS 536

Query: 244 FGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
            G NPT         E F+ DF  ++YG+   V     LRP  +F D + L   +  D +
Sbjct: 537 VGGNPTFGDVRETRAEVFLLDFEGDLYGRDLPVFLIRRLRPMTRFPDAQALAAQIARDVE 596

Query: 304 KARK 307
           + R+
Sbjct: 597 RCRE 600


>gi|320528346|ref|ZP_08029508.1| riboflavin biosynthesis protein RibF [Solobacterium moorei F0204]
 gi|320131260|gb|EFW23828.1| riboflavin biosynthesis protein RibF [Solobacterium moorei F0204]
          Length = 308

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 11/312 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ--AIKIANNSPITVLSFNPH 58
           M V +      ++  +       IG FDG+HLGH  +++   A+   +N    +++F P 
Sbjct: 1   MRVINI--GAHTVQKYHNPMCACIGYFDGMHLGHQALVKATVALAEKHNCESALITFEPD 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   I+    +  ++    +     ++G   +I   F  E +  S   FI K  +  L +
Sbjct: 59  PWVTIKGLKDVKHITTMRQRINRAVELGIQNIIILDFDKEMSELSPADFIHK-TLAKLNL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F +G   AGD   L+   +              ++   +SS+ I  A+ +G 
Sbjct: 118 KGIVCGFDFHYGLHGAGDCNTLKSETDYDVVVVDA----VEDEVGKISSTRICDAIVQGD 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTS 237
           +     +LG  +++E  V  G + GR +GFPTAN++     +L KEGVYA      D   
Sbjct: 174 MPAIKKMLGQYYSLEGIVRRGHQQGRLMGFPTANIEYSDEYLLPKEGVYASMVEI-DHHV 232

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + N G NPT   +  L LE++I  +S  +YG+   V   +YLRPEI FK  E L + 
Sbjct: 233 YGAMTNLGHNPTFNTSEKLSLETYIIGYSGTLYGRILKVQLLEYLRPEIHFKSRENLILQ 292

Query: 298 MGEDEKKARKIL 309
           + +D +  +KIL
Sbjct: 293 LEQDVRDIKKIL 304


>gi|167751259|ref|ZP_02423386.1| hypothetical protein EUBSIR_02245 [Eubacterium siraeum DSM 15702]
 gi|167655766|gb|EDR99895.1| hypothetical protein EUBSIR_02245 [Eubacterium siraeum DSM 15702]
          Length = 309

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 8/302 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+I +++   +     A+G FDG+HLGH  ++E+  +        + +F  H  T +   
Sbjct: 15  IDITENIIP-IPPTATALGFFDGLHLGHMKVVEECFR-HGGLCPAMFTF--HSDTALPKR 70

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
             I  L    ++ + L + G   +    F     +Y+A  FI+KVLV+ +  K V+ G  
Sbjct: 71  ERIENLLTNDMKLEKLAEAGVQYIYSPDFN-SVCDYTARDFIEKVLVKIMNAKVVVCGFD 129

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FR G     D   L+    +YG   V I    +    +V S+ I+  +  G +  A  LL
Sbjct: 130 FRLGAGGGSDAEELKCICREYGIKVVIIPPF-SLDGCVVHSTAIKNLIKSGEIAKANKLL 188

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFG 245
           GY F+IE  VI G +IGRT+G PT N +   +I + + GVY       D      V N G
Sbjct: 189 GYDFSIEGRVIEGNRIGRTIGSPTINQRFPENIVMPRFGVYKS-VTYLDGRVMPSVTNIG 247

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+      L E+ I DF  ++YG+   VS  D++RPE +F  + +LK  + +D+  A
Sbjct: 248 VKPTVDYKDSPLAETHIMDFDGDLYGRTLRVSLLDFIRPERRFDSVGELKAQLDKDKITA 307

Query: 306 RK 307
           ++
Sbjct: 308 KQ 309


>gi|282856506|ref|ZP_06265781.1| riboflavin biosynthesis protein RibF [Pyramidobacter piscolens
           W5455]
 gi|282585627|gb|EFB90920.1| riboflavin biosynthesis protein RibF [Pyramidobacter piscolens
           W5455]
          Length = 306

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 7/298 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V IG FDG H GH  +  QA ++A  +     +++F+PHPR ++        L      
Sbjct: 2   IVCIGAFDGYHRGHFSLFRQAREMAARAHTEWKIVTFSPHPRYVLGGLKA--RLFTLEDA 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +         +   FT E A+     F+ ++    L V  ++ G +FRFG+DR+GD  
Sbjct: 60  AFLRRNFDIPEPLEIPFTREFASTEPRLFLDELRA-RLGVTGIVVGREFRFGRDRSGDGE 118

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L +   + G     + +L  +   +VSS+ +R  +  G+V  AA LLGY + + S+V+ 
Sbjct: 119 FLARYCAERGLELALMPQLVMDDGIVVSSTRVRDMVQAGNVDQAAELLGYPWFLFSEVVG 178

Query: 199 GEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           GE+ GR +G+PTANM      L   EGVYA          +    + GRNPT +  G L 
Sbjct: 179 GERRGRAMGYPTANMLPDEKKLTPGEGVYAGAM-WHGGRWWPAAISVGRNPTFLVQGSLR 237

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           +E+ +  F  ++YG+R  ++F   LR   +F     L   +  D ++ R++ ++S PL
Sbjct: 238 IEAHVIGFHGDLYGRRPLLAFLKRLRLMTRFSGRMSLMKQLALDCEETRRVFDASRPL 295


>gi|162455215|ref|YP_001617582.1| riboflavin biosynthesis protein [Sorangium cellulosum 'So ce 56']
 gi|161165797|emb|CAN97102.1| Riboflavin biosynthesis protein [Sorangium cellulosum 'So ce 56']
          Length = 311

 Score =  255 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 16/289 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+HLGH  +L  A   A    +    L+F PHP +++   +P  TL+    + 
Sbjct: 2   VIIGNFDGVHLGHQALLADAALDAERRGLEPVALTFAPHPASVL-GRTPPATLTALPRKI 60

Query: 80  KILEKMGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +++++      IR     F    A  + E+F+++VL++ L  + V+ G  FRFG+ RAGD
Sbjct: 61  ELIQR--VQPAIRVDAVTFDRAFAAQTPEEFVRRVLLDRLAARVVLVGANFRFGRGRAGD 118

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L + GE  GF T     L  +     SS+ +R AL +G + +A  +L     +   V
Sbjct: 119 FTTLGRLGEDLGFETRS-HPLVGDAEGAWSSTRVRAALARGDLESAERMLSRPHMLSGVV 177

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYA-----IRFRTQDQTSYSGVANFGRNPTMV 251
             G + GRT+GFPT N+    + L   GVYA     +    +      GVAN G  PT+ 
Sbjct: 178 AQGARRGRTIGFPTCNIDEIDEALPPFGVYATLVDRVTSSGRAIALARGVANLGVRPTVE 237

Query: 252 PNGPLL--LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            +      LE  +FD  +++YG    V     LR E +F  + +LK  +
Sbjct: 238 ASRQARPNLEVHLFDVDEDLYGAALRVHLIARLREERRFSGLPELKAQI 286


>gi|239618460|ref|YP_002941782.1| riboflavin biosynthesis protein RibF [Kosmotoga olearia TBF 19.5.1]
 gi|239507291|gb|ACR80778.1| riboflavin biosynthesis protein RibF [Kosmotoga olearia TBF 19.5.1]
          Length = 299

 Score =  255 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 85/294 (28%), Positives = 147/294 (50%), Gaps = 11/294 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V IGNFDG+HLGH  I+ + +K++   N   T LS   +P      + P   +   + + 
Sbjct: 7   VCIGNFDGVHLGHRKIMSETLKLSRKLNVCSTALSI-MYPWGYYFPNFP-GLIYTIAKRV 64

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++  +G   ++      E  +   E++I  ++ +   +  ++ G  F FGK   G+  +
Sbjct: 65  ELILSLGIKNVVTVDI-EEIKDIEPEEYILALINQ--GMVGLVVGEDFTFGKGARGNTEL 121

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++   K  F  V +  L+ +  + +SSS IR  L +G +  A  LLG  +TI   V   
Sbjct: 122 LRELSRKLKFELVIVPHLKRD-GRKISSSWIRELLAQGKIELANELLGSPYTISGKVYQD 180

Query: 200 EKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            ++G  LGFPTAN+    + +   + GVY ++        Y G+ N G  PT+  +  + 
Sbjct: 181 NRLGTKLGFPTANISRGIEKVVTPRSGVYIVKS-IIGSRLYYGLLNIGFRPTVNFSKEIK 239

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            E +  DFS ++YG+R  +    +LRPE+KF  I++L   +  DE+ ARK +  
Sbjct: 240 YEVYFLDFSGDLYGKRLEIELLKFLRPELKFASIDELVHAIRRDERIARKWVSK 293


>gi|257439278|ref|ZP_05615033.1| riboflavin biosynthesis protein RibF [Faecalibacterium prausnitzii
           A2-165]
 gi|257198153|gb|EEU96437.1| riboflavin biosynthesis protein RibF [Faecalibacterium prausnitzii
           A2-165]
          Length = 306

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 18/318 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +  ++        H  G  VA+G FDGIH+GH  ++E A++ A    +   V +F   
Sbjct: 1   MQIVSSLSPLAL--EHEGGTAVAMGYFDGIHIGHRAVIEGAVEWAKAHGAAPAVFTFK-- 56

Query: 59  PRTIIQSSSPIF--TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
               + + S +    L     +  ++  +G    +  +F  E    + EQF+  + V+  
Sbjct: 57  ----LPADSKMKGRRLLSTEDKHALIASLGVECYLCPEF-EEIRAMTPEQFVYGI-VQDC 110

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + +  G  F FG   AG   +L++     G   V +  +   + + VSS+ IRTAL  
Sbjct: 111 HARALFCGENFTFGAKAAGTPELLKELCAPLGVEVVVV-PMAQFEEKPVSSTRIRTALEG 169

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQ 235
           G V  A  +LG  + I   V HG  +GRTLG PT N +  +   + + G+Y  R R  D 
Sbjct: 170 GDVPAANAMLGMPYAIRFAVQHGAGLGRTLGVPTINQIYPAGFQMPRYGIYITRTRIGD- 228

Query: 236 TSYSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
           T Y      G  PT+  +   +  E+FI DFS ++YG    V F+ YL P  KF  +++L
Sbjct: 229 TWYPSATGLGTRPTVNSDETKVTCETFIPDFSGDLYGTDPVVEFYAYLSPSKKFDTLDEL 288

Query: 295 KIYMGEDEKKARKILESS 312
           K  +    ++A+     +
Sbjct: 289 KACIDHAARRAKAYFAKA 306


>gi|281491623|ref|YP_003353603.1| riboflavin kinase/ FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375341|gb|ADA64854.1| Riboflavin kinase/ FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 300

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 146/313 (46%), Gaps = 20/313 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +E N  L    +  ++ +G FDG+H GH  +  +A KIA   N  I V +F   
Sbjct: 1   MEI---LEFNDELKFD-EELILVLGYFDGLHRGHQSLFTEAKKIAAVLNLKIAVFTFPEK 56

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P        P  +  L+    + ++  + G   L+   FT   A+ ++ +F + V V+  
Sbjct: 57  PTLTFNKFEPEMLLKLTSDEKRAELFAENGVDYLVFKDFTSNFAHQTSTEFAESV-VKRF 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K VITG  +  G D       ++       +  V + E  +   + +SS+ IR A+ +
Sbjct: 116 NPKVVITGFDYTTGSD-------MKNLKSTEDYRVVIMPEKADEHGK-ISSTRIRKAVEE 167

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HG   GR LG+PTAN+ +   + L   GVY         
Sbjct: 168 GDIAQANELLGYSYETRGLVVHGFARGRQLGYPTANLVIKDYVHLPAVGVYTC-DVIFAG 226

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G A+ G N T        +E  IFDF+ EIYG++ TV + D +R  IKF  I++L 
Sbjct: 227 ERHRGFASIGYNDTFN-GTEKTVEVHIFDFNGEIYGEKLTVLWLDKIRDMIKFDGIDQLI 285

Query: 296 IYMGEDEKKARKI 308
             M EDE+ AR  
Sbjct: 286 KQMKEDEQIARDF 298


>gi|227524403|ref|ZP_03954452.1| FAD synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088634|gb|EEI23946.1| FAD synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 318

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 9/316 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +                 V+A+G FDG H GH  +L++A +    + + + VL+++ H
Sbjct: 1   MDIIKLHYPLDDDCQSKDKTVIAMGFFDGFHTGHQAVLQRAKEEAQKHGTKLVVLTYDHH 60

Query: 59  PRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P  + +   S     ++    + K+ ++ G   ++   ++ +  + S ++FIQ   +   
Sbjct: 61  PALVYKKMSSHEKRYITLLDYKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQH-FLSRF 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               V+ G    +G + A +   L K      F  + +  L+ N  Q VSS+ IR  L  
Sbjct: 120 NPIAVVAGFDHTYGGEPADNMVNLPKYVNG-AFKVITVPALKQND-QKVSSTQIRNNLDN 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQ 235
           GH+     LLG  F  E  ++HGE+ GR LG+PTAN++ S    L   G+Y +      +
Sbjct: 178 GHIEKVNQLLGRPFQTEGVIVHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI-GR 236

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+A+ G+N T   NGP+ +E  + DF Q IYG+   V++  + R EIKFK  + L 
Sbjct: 237 KKYLGMASIGKNVTFSDNGPMTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTADDLV 296

Query: 296 IYMGEDEKKARKILES 311
             +  DE+  R  L  
Sbjct: 297 EQLDRDEQDTRHYLSE 312


>gi|317495425|ref|ZP_07953794.1| riboflavin kinase [Gemella moribillum M424]
 gi|316914484|gb|EFV35961.1| riboflavin kinase [Gemella moribillum M424]
          Length = 305

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 14/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHP 59
           M +F NI     +    K  V A+G FDG+H  H  I+ + +  A    + TV++ +  P
Sbjct: 1   MKIF-NISDYNIIEKSNKKRVAALGFFDGVHKAHQKIISEMVSEAREGYVPTVITLDRSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     S    +L+P   + KI E++G   +   +F  +  N  A +FI K+ ++ L+V+
Sbjct: 60  KEYFAKSKE-ESLTPLKKKSKIFEELGVEEVYYLEFNEQLQNLEAIEFIDKI-LKKLKVE 117

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            V  G  +++G   +G   ++   G K     V I E    +   +S++ +++ +     
Sbjct: 118 KVFFGYDYKYGVKGSGTPEMILDSGIK-----VSIHEKEEIEHHKISTTTLKSFVINNDF 172

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK--EGVYAIRFRTQDQTS 237
           ++     G  ++I   VI G+++GRT+ FPTAN+ L+ + LL    GVY  +     +  
Sbjct: 173 VSYIKFSGRAYSIVGTVIKGKQLGRTINFPTANLDLTENYLLPKTNGVYLTKTMV-GKKI 231

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  + N G NPT+        +E+ I DF ++IYG+   V F+++LRPE KF    +LK 
Sbjct: 232 YKSLTNIGYNPTVSGIKDKKSIETHILDFDEDIYGEEIEVYFYEFLRPEKKFDSFNRLKE 291

Query: 297 YMGEDEKKA-RKIL 309
            +  D+    +KI 
Sbjct: 292 QLQIDKDVCEKKIF 305


>gi|227510259|ref|ZP_03940308.1| FAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227189911|gb|EEI69978.1| FAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 9/298 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQS--SSPIFTLSP 74
             V+A+G FDG H GH  +L++A +    + + + VL+++ HP  + +   S     ++ 
Sbjct: 19  KTVIAMGFFDGFHKGHQAVLQRAKEEAQKHGTKLVVLTYDHHPALVYKKMSSHEKRYITL 78

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + K+ ++ G   ++   ++ +  + S ++FIQ   +       V+ G    +G + A
Sbjct: 79  LDYKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQH-FLSRFNPIAVVAGFDHTYGGEPA 137

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +   L K      F  + +  L+ N  Q VSS+ IR  L  GH+     LLG  F  E 
Sbjct: 138 DNMVNLPKYVNG-AFKVITVPALKQNN-QKVSSTQIRNNLDNGHIEKVNQLLGRPFQTEG 195

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            ++HGE+ GR LG+PTAN++ S    L   G+Y +      +  Y G+A+ G+N T   N
Sbjct: 196 VIVHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI-GRKKYLGMASIGKNVTFSDN 254

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           GP+ +E  + DF Q IYG+   V++  + R EIKFK  + L   +  DE+  R  L  
Sbjct: 255 GPMTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTADDLVEQLDRDEQDTRHYLSE 312


>gi|332653579|ref|ZP_08419324.1| riboflavin biosynthesis protein RibF [Ruminococcaceae bacterium
           D16]
 gi|332518725|gb|EGJ48328.1| riboflavin biosynthesis protein RibF [Ruminococcaceae bacterium
           D16]
          Length = 303

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 10/297 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+A+G FDG+H GH  +L    + A          +F+  P   I     +  LS    +
Sbjct: 7   VIALGFFDGVHKGHGALLSTVTRRAQELDAAACAFTFDRSPTAAITG-QVVPLLSSVEDR 65

Query: 79  EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             ++    G   +I   F         + FI + L++ L V  V+ G  F FG    G+ 
Sbjct: 66  VWLMRSCYGIQEVIVSSFD-GMMRMDWQDFITEYLIKQLNVVHVVAGHDFHFGYMGKGNP 124

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++  EK G     I ++   +   +SS+ IRT + +G +  A   LG+   + + V 
Sbjct: 125 QRLKETCEKLGVGCDIIGKV-EQEGITISSTYIRTLIAQGEMERAVDFLGHPHVLTNRVT 183

Query: 198 HGEKI-GRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-G 254
           HG+KI   +LGFPT N+++  P I+   GVYA R    D  S+  V N G  PT+  N G
Sbjct: 184 HGKKIGSSSLGFPTVNLRIPAPVIVPAFGVYATR-VVVDGESHMAVTNVGVRPTVSDNDG 242

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            + +E FI DFS ++YG+   + F+ YLR E KF  ++ L   +G + ++ R    +
Sbjct: 243 RVTVEGFILDFSGDLYGKELRMEFYSYLRGEKKFPSLQALAEEIGRNAQQTRDFFAA 299


>gi|227513188|ref|ZP_03943237.1| FAD synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083569|gb|EEI18881.1| FAD synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 318

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 15/319 (4%)

Query: 1   MHVFHNIEINQSLPNHLK---GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSF 55
           M +   I+++  L +  +     V+A+G FDG H GH  +L++A +    + + + VL++
Sbjct: 1   MDI---IKLHYPLDDDCQFKDKTVIAMGFFDGFHTGHQAVLQRAKEEAQKHGTKLVVLTY 57

Query: 56  NPHPRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           + HP  + +   S     ++    + K+ ++ G   ++   ++ +  + S ++FIQ   +
Sbjct: 58  DHHPALVYKKMSSHEKRYITLLDYKLKLFKEFGVDEVLLVNYSYQFQSQSPQEFIQH-FL 116

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
                  V+ G    +G + A +   L K      F  + +  L+ N  Q VSS+ IR  
Sbjct: 117 SRFNPIAVVAGFDHTYGGEPADNMVNLPKYVNG-AFKVITVPALKQND-QKVSSTQIRNN 174

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRT 232
           L  GH+     LLG  F  E  ++HGE+ GR LG+PTAN++ S    L   G+Y +    
Sbjct: 175 LDNGHIEKVNQLLGRPFQTEGVIVHGEERGRLLGYPTANVEHSEYQWLPTIGIYIVTVEI 234

Query: 233 QDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             +  Y G+A+ G+N T   NGP+ +E  + DF Q IYG+   V++  + R EIKFK  +
Sbjct: 235 -GRKKYLGMASIGKNVTFSDNGPMTVEINLIDFHQNIYGEVVRVNWLSHGRGEIKFKTAD 293

Query: 293 KLKIYMGEDEKKARKILES 311
            L   +  DE+  R  L  
Sbjct: 294 DLVEQLDRDEQDTRHYLSE 312


>gi|222100692|ref|YP_002535260.1| Riboflavin kinase/FMN adenylyltransferase [Thermotoga neapolitana
           DSM 4359]
 gi|221573082|gb|ACM23894.1| Riboflavin kinase/FMN adenylyltransferase [Thermotoga neapolitana
           DSM 4359]
          Length = 296

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +LE+  ++  +   P  V + + HP   +    P   LS    +
Sbjct: 2   VVSIGVFDGVHIGHRRVLEKLREVASSKKMPALVFTIS-HPPEYLSPDFPGLLLS-VEER 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             IL +  FS ++   F  +  + S ++F++K L     V  V+ G  FRFGK+  GD  
Sbjct: 60  VAILSR--FSEVVVLDF-FQIKDLSPKEFVEKYL---PGVFGVVVGRDFRFGKNAEGDTS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     + +      + VSSS IR  + +G V      LG  + I   V  
Sbjct: 114 FLR----KNGLEVYEVPD-TIVNGKKVSSSLIRKLVQEGRVEEIPPYLGRYYEISGIVYR 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY ++    +Q    GV N G  PT+  +  +
Sbjct: 169 DRQFGRKLGFPTANIDRGREKLVNLKNGVYLVKVNLPNQEEKFGVMNVGFRPTVSDSTHV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YG    V    ++RPE KF  IE+LK  + +D + A+++++ 
Sbjct: 229 KYEVYILDFEGDLYGAHLKVEVLKFIRPEKKFNSIEELKNTITQDVETAKRLMDD 283


>gi|294101958|ref|YP_003553816.1| riboflavin biosynthesis protein RibF [Aminobacterium colombiense
           DSM 12261]
 gi|293616938|gb|ADE57092.1| riboflavin biosynthesis protein RibF [Aminobacterium colombiense
           DSM 12261]
          Length = 316

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 7/293 (2%)

Query: 23  AIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            IG FDG H GH L+L++A  + +  N    V++F PHP+ +      +F L   + + +
Sbjct: 4   VIGAFDGFHKGHQLLLKEAERLSVEQNDTWGVVTFTPHPQYVFNPDR-LFLLFTEAEKRQ 62

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I   +    ++   F    A  +   F++++  +   V  ++ G  FRFG  R GD   L
Sbjct: 63  IASALHIQNILWMPFDQYIAALNPLDFLRRLESQT-SVTGIVVGENFRFGAGRKGDIAFL 121

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++  +K       +  L  +    VSS+ IR+ +  G +  A +LLGY F +   V+HG 
Sbjct: 122 RQYCKKKNILFSPVPTLEID-GLAVSSTVIRSEVLSGRMQMAKYLLGYPFFLYETVVHGH 180

Query: 201 KIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             GR LGFPTAN+ +    I+   G YA      D + + G  N G NPT      L +E
Sbjct: 181 HRGRELGFPTANLTVPDHKIIPPSGTYAA-TVIIDGSFHPGALNIGSNPTFTDVKGLRIE 239

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             I  FS ++Y ++  V   +YLR E +F + + L   +  D + A  + E +
Sbjct: 240 VHIPGFSDDLYNKKIMVFIEEYLRSEKRFSNRQALAKQLSRDSEIAVTLFEEN 292


>gi|15673109|ref|NP_267283.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12724088|gb|AAK05225.1|AE006345_5 riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406676|gb|ADZ63747.1| riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 300

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 20/313 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +E N  L    +  ++ +G FDG+H GH  +  +A KIA   N  I V +F   
Sbjct: 1   MEI---LEFNDELKFD-EELILVLGYFDGLHRGHQSLFTEAKKIAAVLNLKIAVFTFPEK 56

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P        P  +  L+    +  +  + G   L+   FT   A+ ++ +F + V V+  
Sbjct: 57  PTLTFNKFEPEMLLKLTSDEKRADLFAENGVDYLVFKDFTSNFAHQTSTEFAESV-VKRF 115

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K VITG  +  G D       ++       +  V + E  +   + +SS+ IR A+ +
Sbjct: 116 NPKVVITGFDYTTGSD-------MKNLKSTEDYRVVIMPEKADEHGK-ISSTRIRKAVEE 167

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ 235
           G +  A  LLGY +     V+HG   GR LG+PTAN+ +   + L   GVY         
Sbjct: 168 GDIAQANELLGYSYETRGLVVHGFARGRQLGYPTANLVIKDYVHLPAVGVYTC-DVIFAG 226

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             + G A+ G N T        +E  IFDF+ EIYG++ TV + D +R  IKF  I++L 
Sbjct: 227 ERHRGFASIGYNDTFN-GTEKTVEVHIFDFNGEIYGEKLTVLWLDKIRDMIKFDGIDQLI 285

Query: 296 IYMGEDEKKARKI 308
             M EDE+ AR  
Sbjct: 286 KQMKEDEQIARDF 298


>gi|206901756|ref|YP_002250937.1| riboflavin biosynthesis protein RibF [Dictyoglomus thermophilum
           H-6-12]
 gi|206740859|gb|ACI19917.1| riboflavin biosynthesis protein RibF [Dictyoglomus thermophilum
           H-6-12]
          Length = 527

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 93/311 (29%), Positives = 158/311 (50%), Gaps = 11/311 (3%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNP-HPRT 61
           H  +I  +     KG  + IG FDG+HLGH  I+++ +   + NN    V++F    P+ 
Sbjct: 5   HIKKIKLNKLEDKKGFAITIGVFDGLHLGHTSIIDELVNTALINNLNSGVITFENAFPQN 64

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           +   SS  F L+    +       G        F+ E  + S E+FI+ +LV  + +  +
Sbjct: 65  LKNISS--FLLTS-DEKLNFFSLKGVDYSFILPFSEEIRSLSPEKFIE-LLVNTIPISCL 120

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G+ F FGK+R+GD   L++ GEKY F+   +  L    S IVSSS IR  L +G +  
Sbjct: 121 CVGSNFFFGKNRSGDVNTLRELGEKYNFNLKIV-PLEKEDSNIVSSSYIRNLLLEGKINI 179

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSG 240
           A  LLGY++ I   V  G+ +G  +GFPT N++     ++ K G+Y  + + + +  Y+ 
Sbjct: 180 ANKLLGYKYFINGIVERGDNLGSKIGFPTVNIKYEKEKLIPKTGIYKGKVKVR-RDIYNA 238

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
               G  PT        +E++I DF+  +YG++  +   DY+R + KF   +KL+  + +
Sbjct: 239 AIYIGTRPTF-GGKETRVEAYILDFNDHLYGEKVEIVLEDYVRSDQKFDSTDKLRAQIQK 297

Query: 301 DEKKARKILES 311
           D +  R +++ 
Sbjct: 298 DLEVIRDLIKE 308


>gi|227497563|ref|ZP_03927789.1| possible FAD synthetase [Actinomyces urogenitalis DSM 15434]
 gi|226832963|gb|EEH65346.1| possible FAD synthetase [Actinomyces urogenitalis DSM 15434]
          Length = 287

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 11/280 (3%)

Query: 50  ITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
              ++F+PHP  + +  + +  ++  + + ++L   G  A++   +TL+ A  S   F++
Sbjct: 2   AVAVTFDPHPILVHRPHTHLPMVTSLADRLELLATTGLDAVLVIHYTLDFAQQSPYGFVR 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           + L E L  + V+ G   RFG+  +GD   L++ G   G     + ++     +  SS+ 
Sbjct: 62  RWLEELLGARAVVVGDDVRFGRGNSGDAATLEQIGRADGLEVEIVHDVLAPSGRRWSSTW 121

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAI 228
           +R  +  G V  AA +LG    +   V+HG + GR LGFPTAN+Q +   ++  +GVYA 
Sbjct: 122 VRELIEAGDVAGAAQVLGRPHRLRGTVVHGLRRGRELGFPTANLQAATAGVVPPDGVYAG 181

Query: 229 RFR---------TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSF 278
                          Q       + G NPT        +E+ +       +YG+   +  
Sbjct: 182 WLVRSPGAGDGSGGGQERLPAAISIGTNPTFDDVPERTVEAHVLGRSDLNLYGEVVAIEL 241

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
            ++LRP + F  +E L   M  D     ++L    P   R
Sbjct: 242 VEHLRPMLAFDGLEPLLAQMRADVVDTARVLGVPVPAPVR 281


>gi|313115483|ref|ZP_07800948.1| riboflavin biosynthesis protein RibF [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622193|gb|EFQ05683.1| riboflavin biosynthesis protein RibF [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 305

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 135/314 (42%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           M +         L    KG  VA+G FDGIH+GH  ++E A++ A        V +F   
Sbjct: 1   MQIISQF-APLPLAQPKKGTAVAMGFFDGIHIGHRAVIESAVQWAKEHDAAPAVFTFK-L 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P     +      L   + +  ++  +G    +   F  E    + EQF+  + V     
Sbjct: 59  PMV---NKMKGKRLLSTADKHALIASLGVEYYLTPDF-EEIKGLTPEQFVLGI-VRDCNA 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  F FG   AG+  +L+      G   + +  +   + + VSS+ IRTAL  G 
Sbjct: 114 RALVCGENFTFGAKAAGNPELLRTLCAPLGVEVIVV-PMAQFEEKPVSSTRIRTALEGGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS 237
           +  A  +LG  + I  +V HG  +G TLG PT N        L + G+Y  R        
Sbjct: 173 IPAANAMLGMPYAIRFEVQHGAGLGHTLGVPTINQLYPEGFQLPRSGIYITRTHIGG-VW 231

Query: 238 YSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y      G  PT+  +   +  E+FI  FS ++YG    V F  YL P  KF  +++L+ 
Sbjct: 232 YPSATGLGSRPTVNDDATKVTCETFIPGFSGDLYGTDPVVEFHAYLSPSKKFDTLDELRA 291

Query: 297 YMGEDEKKARKILE 310
            +    K+A++   
Sbjct: 292 CINNAAKRAQEYFA 305


>gi|289522936|ref|ZP_06439790.1| riboflavin biosynthesis protein RibF [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503479|gb|EFD24643.1| riboflavin biosynthesis protein RibF [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 329

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 8/291 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           +V +G+FDG H GH  + E A   ++   +   V++F PHP+ ++ + S +   +  S +
Sbjct: 8   IVVLGSFDGFHKGHQALFEVARDASDRMDMLWGVMTFVPHPQIVLGNGSFVPLFTD-SER 66

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + I   +     I+  F+ +  + + + FI+++     + + ++ G  F+FGK R+GD  
Sbjct: 67  DFIASFLNIPDFIKIPFS-DVKDLNPKDFIEELG-SRYKARGIVVGENFKFGKHRSGDVE 124

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G+    I   + + S  VSSS +R  + KG++     +LGY + I + V  
Sbjct: 125 FLKSYLTKKGWFFAAIPPFKIDGSV-VSSSLVRQLVKKGYMQQTEAMLGYPYFIIAPVTE 183

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+  GR LGFPTAN+  S   +L  +GVYA          +SG  N G NPT      + 
Sbjct: 184 GDHRGRILGFPTANLPASELKLLPPKGVYAT-AVLAHGKWWSGALNIGYNPTFERGDEIR 242

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +E  +  F  ++YG+   V     +R E KF+  E L   M +D ++ R+I
Sbjct: 243 IEVHLDQFEGDLYGEMIAVLLLAQIREEKKFESAEGLVAQMKDDVERIREI 293


>gi|125624241|ref|YP_001032724.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|42405316|gb|AAS13486.1| riboflavin kinase [Lactococcus lactis subsp. cremoris NZ9000]
 gi|124493049|emb|CAL98012.1| riboflavin kinase / FMN adenylyltransferase [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071020|gb|ADJ60420.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 300

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/293 (30%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFAEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPDMLLKLTSDK 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  + G   L+   FT + A+ ++ +F + V V     K VITG  +  G D    
Sbjct: 77  KRAELFAENGVDYLVFKDFTSKFAHQTSTEFAKSV-VMRFNPKVVITGFDYTTGSD---- 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++       +  V + E  + + + +SS+ IR A+  G +  A  LLGY +     V
Sbjct: 132 ---MKNLESTEDYRVVIMPEKADEQGK-ISSTRIRKAVEAGDIAQANQLLGYSYETTGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GR LG+PTAN+ +   + L   GVY           + G A+ G N T      
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVLFAG-ERHRGFASIGYNDTFN-GTE 245

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             +E  IFDF+ EIYG+  TV + D +R  IKF+ I++L   M EDE+ AR  
Sbjct: 246 KTVEVHIFDFNGEIYGENLTVLWLDKIRDMIKFEGIDQLIDQMKEDEQIARDF 298


>gi|116511974|ref|YP_809190.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Lactococcus
           lactis subsp. cremoris SK11]
 gi|116107628|gb|ABJ72768.1| FAD synthase [Lactococcus lactis subsp. cremoris SK11]
          Length = 300

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/293 (30%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSP--IFTLSPPS 76
           ++ +G FDG+H GH  +  +A KIA   N  I V +F   P        P  +  L+   
Sbjct: 17  ILVLGYFDGLHRGHQSLFAEAKKIAAVLNLKIAVFTFPEKPTLTFNKFEPDMLLKLTSDK 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++  + G   L+   FT + A+ ++ +F + V V     K VITG  +  G D    
Sbjct: 77  KRAELFAENGVDYLVFKDFTSKFAHQTSTEFAKSV-VMRFNPKVVITGFDYTTGSD---- 131

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              ++       +  V + E  + + + +SS+ IR A+  G +  A  LLGY +     V
Sbjct: 132 ---MKNLESTEDYRVVIMPEKADEQGK-ISSTRIRKAVEAGDIAQANQLLGYSYETTGLV 187

Query: 197 IHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           +HG   GR LG+PTAN+ +   + L   GVY           + G A+ G N T      
Sbjct: 188 VHGFARGRQLGYPTANLVIKDYVHLPAVGVYTCDVLFAG-ERHRGFASIGYNDTFN-GTE 245

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             +E  IFDF+ EIYG+  TV + D +R  IKF+ I++L   M EDE+ AR  
Sbjct: 246 NTVEVHIFDFNGEIYGENLTVLWLDKIRDMIKFEGIDQLIDQMKEDEQIARDF 298


>gi|221195800|ref|ZP_03568853.1| riboflavin biosynthesis protein RibF [Atopobium rimae ATCC 49626]
 gi|221184274|gb|EEE16668.1| riboflavin biosynthesis protein RibF [Atopobium rimae ATCC 49626]
          Length = 347

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 9/299 (3%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V AIG FDG+H GH  ++ +A         P+  ++F+P P  ++ S SP   L     
Sbjct: 42  CVCAIGVFDGLHEGHKALIAEARADAQRREVPLVAVTFDPDPAEVVCSRSP-RRLLQDET 100

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + L      A++ + FT E A  S  ++++K L+ ++    +  G+ F FG    G  
Sbjct: 101 RIRALTTCSVDAILVHAFTPEFAGLSVCEYVEKALLPYIHPVAIHVGSDFGFGARGEGRA 160

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L   G K+GF      +L       +SS+ IR  +    +  AA LLG    +   V+
Sbjct: 161 RDLATLGTKHGFEV-IAHQLIEKDGSAISSTRIRNLIEAARIDEAAALLGRPHFLSGTVM 219

Query: 198 HGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRT----QDQTSYSGVANFGRNPTMVP 252
           HG   G + GFPTAN+ LSP D +  +GVYA           +  +    N G   +   
Sbjct: 220 HGRGQGASFGFPTANISLSPKDCMPADGVYACYIVDTQKPGGEEIWPAAVNVGVPRSFEV 279

Query: 253 NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
               LLE+ +  F   +YG      F +YLRP I F+ +E+L   + ++ +  R  L+S
Sbjct: 280 KKTPLLEANLLGFKGNLYGHTLNCVFMNYLRPPIVFQSVEELSTTVLKNIEWVRTHLDS 338


>gi|187251087|ref|YP_001875569.1| riboflavin biosynthesis protein RibF [Elusimicrobium minutum
           Pei191]
 gi|186971247|gb|ACC98232.1| Riboflavin biosynthesis protein RibF [Elusimicrobium minutum
           Pei191]
          Length = 302

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 9/292 (3%)

Query: 22  VAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FDG+H GH  ++     +   NN    ++ F   P+T++ +S  +  L+ P  + 
Sbjct: 8   ITIGTFDGVHKGHQTLISGLNKLAKKNNMAPLLVCFPLPPKTLLSNSPELTVLTLPDEKY 67

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +L+  G   +    F     + S E F   +L++   +  ++ G  F FGK+R G    
Sbjct: 68  ALLKHYGAKNIEILNF-KSCRHISRENFFD-ILLKRYNMGGLLVGRDFAFGKERKGHIDF 125

Query: 140 LQKRGEKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
           L+    K G   V  D    +++    +SSS IR  L  GH+  A   LG ++T E  V+
Sbjct: 126 LRAACAKQGVKLVVADFYGNKDSGGHKISSSLIRKTLLDGHIRLAGKFLGRKYTAEGIVV 185

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP-- 255
            G+K+GR LGFPTAN+ ++   +L +GV+++      +  + GVAN G  PT+ P     
Sbjct: 186 TGKKLGRKLGFPTANLGINHYKVLPQGVFSVEA-VLGKEKFKGVANIGFRPTVNPIHAKV 244

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            L+E  I +F+++IYG+  +V+F D +R E KF  +  L   M  D+  A K
Sbjct: 245 PLVEVHILNFNRDIYGKNLSVNFVDKIRGEKKFDGLPALIKQMTVDKALAEK 296


>gi|154249095|ref|YP_001409920.1| riboflavin biosynthesis protein RibF [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153031|gb|ABS60263.1| riboflavin biosynthesis protein RibF [Fervidobacterium nodosum
           Rt17-B1]
          Length = 289

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 15/293 (5%)

Query: 22  VAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IG FDG+H GH  IL +  +     NS   + +   +P      +     ++    + 
Sbjct: 3   ITIGVFDGVHRGHVKILSKLKECAERENSDSKIYTI-LYPMEYYTGNFD-GLITSVEDRI 60

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++L   G   ++      +  + S E F +K+      VK ++ G  F+FGK+ +GD  +
Sbjct: 61  ELLSIYGEPEILELP---KIQHLSPEGFFEKISQ---GVKGIVVGHDFKFGKNGSGDIRL 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K  +  G     ++ ++ +  + VSSS IR  L KG VL A   LG  ++I   V   
Sbjct: 115 LEKLCKDKGICLEVVEPVKVDNIR-VSSSYIRELLKKGDVLKAKDFLGRNYSIHGVVYKD 173

Query: 200 EKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           ++IGR LGFPTAN++ S   L     GVY ++        + G+ N G  PT+     + 
Sbjct: 174 KQIGRKLGFPTANVKRSEHFLIDPLAGVYLVKVYVP--EQFYGLINVGYRPTVEKTKKIK 231

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            E +I DFS ++YG+   V F ++LRPE+KF +I +L   M ED K AR+I+E
Sbjct: 232 YEVYILDFSADLYGKEIRVEFLEFLRPELKFSNISELVAQMHEDVKIARRIIE 284


>gi|327392672|dbj|BAK10094.1| riboflavin biosynthesis protein ribF [Pantoea ananatis AJ13355]
          Length = 255

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 124/244 (50%), Gaps = 12/244 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M     I    +L     G V+ IGNFDG+H GH  ++ + ++     N P+ V+ F P 
Sbjct: 1   MKFIRGI---HNLNAQHHGCVLTIGNFDGVHRGHQALMGRLLEEGRKRNLPVMVMVFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +    S    L+    + K L ++G  +++  +F    A  SA+ FI ++LV  L V
Sbjct: 58  PLELFAGESAPARLTRLREKLKYLAEIGVDSVLCVRFDHRFAALSAQSFISELLVNKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFG  R GD  +LQK G +YGF  V  +   +   + +SS+ +R AL + +
Sbjct: 118 NYLAVGDDFRFGAGRQGDFLLLQKAGAQYGFDVVSTETFCD-GGKRISSTAVRQALAEDN 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG+ F+I   V+HG+ +GRTLGFPTAN+ L   +        ++ R    + +
Sbjct: 177 LALAQSLLGHPFSISGRVVHGDALGRTLGFPTANLPLRRCVSP------VKGRLCGGSPW 230

Query: 239 SGVA 242
           +G  
Sbjct: 231 AGAT 234


>gi|307299143|ref|ZP_07578944.1| riboflavin biosynthesis protein RibF [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914939|gb|EFN45325.1| riboflavin biosynthesis protein RibF [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 302

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/304 (26%), Positives = 155/304 (50%), Gaps = 11/304 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V  IGNFDG+HLGH  I+++ + IA N  +  T +S   +P      + P   + P + +
Sbjct: 6   VACIGNFDGVHLGHRAIMQKTVNIAANLDLQSTAISI-VYPWGYYFPNFP-GIIYPVAQR 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +++   G   ++    + E      E +I +++ E   ++ ++ G+ F FG    G+  
Sbjct: 64  LELILATGIERVLTVNMS-EIRYLEPEDYISRLMSE--GMRAIVVGSDFTFGNGAKGNIE 120

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++  ++       + +   +  + +SSS IR ++ KG +     LLG R++I   V  
Sbjct: 121 LLERISKEGDLRVEIVPDALYD-GRRISSSWIRESIAKGDIGLTNSLLGKRYSIRGKVYK 179

Query: 199 GEKIGRTLGFPTANMQLSPD--ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
            +++G  +GFPTAN+    +  ++ + GVY I     D   Y G+ N G  PT+  +  +
Sbjct: 180 DKQLGAKIGFPTANIHRGDERLVIPRSGVYIIMSTI-DSRDYFGLLNVGFRPTVNTSEEV 238

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
             E + FD+S  +Y +   + F +++RPE+KF  + +L   +  DE+ AR+ LE    + 
Sbjct: 239 KYEVYFFDYSGNLYNRNLELEFLEFIRPELKFDSLGELIEQIKHDERVARRWLEIHLNML 298

Query: 317 ERDR 320
           +++R
Sbjct: 299 KKER 302


>gi|300854505|ref|YP_003779489.1| bifunctional enzyme FAD synthetase /riboflavin kinase [Clostridium
           ljungdahlii DSM 13528]
 gi|300434620|gb|ADK14387.1| bifunctional enzyme FAD synthetase /riboflavin kinase [Clostridium
           ljungdahlii DSM 13528]
          Length = 312

 Score =  248 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 6/291 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +A+G+FDG+HLGH  ++ + +K+A N+     V +F  HP +II        L   
Sbjct: 14  KSTYIALGSFDGLHLGHINLINKTVKLARNNKANSMVFTFKNHPLSIINPEVSPKILMNN 73

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +  +L+  G   +    F  E      E F+  + +     K +I G  +RFG    G
Sbjct: 74  ESKINVLKDAGLDIINMANFNEEFMKICPEDFVIHL-LNNYRAKGLIVGFNYRFGYKNLG 132

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K  + + F    ID ++     + SS        +G +  A  LL   F ++ +
Sbjct: 133 DVSLLKKMSKIHKFSLNVIDSVKYKGQVVSSSIIRTIISDEGDIKKANKLLTRPFMLQGE 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           VIHG+++GR LGFPT N+      ++ K GVY       +   + G+ N G NPT   N 
Sbjct: 193 VIHGKQLGRKLGFPTVNLDYDKRFVIPKGGVYYTIVECNN-DLFKGITNVGYNPTTCDN- 250

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L +E+ I +F++ +Y +   + F + +R E KF  + +L   + +D+  A
Sbjct: 251 KLSIETHILNFNENMYDKNIKIYFIERIRDESKFGSLTELADQLKKDKMYA 301


>gi|225848001|ref|YP_002728164.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643618|gb|ACN98668.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 311

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 92/295 (31%), Positives = 154/295 (52%), Gaps = 8/295 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V  +GNFDG+HLGH  I+++   IA   N    V++F+PHPR I+       ++     
Sbjct: 16  TVCTVGNFDGLHLGHKEIIKKVKDIAKKENLKSLVITFHPHPRKILNPKKYKCSIVNLET 75

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  + +K     L+  +F  +    SA +F+  +    L+ K +I G  ++FG  + GD 
Sbjct: 76  KIYLFKKENIDYLLIVEFNKDFYQKSAFEFLNFL-KNALKCKVLIVGKDWKFGFKQEGDI 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              +K G   G   + I+++++N S+I S S IR  L+KG +     LLG R+ +   V+
Sbjct: 135 QYAKKVGSSIGIKVIPIEDIKSNSSRISS-SLIRELLSKGELKKVEKLLGRRYFLIEKVV 193

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+  GR +GFPT N++   D+ LK+GVY      +D+  Y  V N+G  PT+       
Sbjct: 194 KGDGKGREIGFPTINLKPDDDLCLKKGVYVGYLE-KDEKVYKAVINYGNRPTL-DGKKTF 251

Query: 258 LESFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E  + +   ++  +     V F +YLR E KF+ +E LK  +  D +KA+++LE
Sbjct: 252 IEVHLIEDKVDLKTEEDYVKVYFIEYLREEKKFESVEDLKNQIKLDIQKAKEVLE 306


>gi|217967600|ref|YP_002353106.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
 gi|217336699|gb|ACK42492.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
          Length = 529

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/294 (31%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+ IG FDG+HLGH  I+++ +   + N     V++F       ++  S    L     +
Sbjct: 22  VITIGVFDGLHLGHSSIVDELVNNALLNGFNSGVITFENAFSQNLKKISSF--LLTYDEK 79

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +L   G    I   F+ E  N S+E FI KVL+  + +  +  G+ F FGKDR G+  
Sbjct: 80  INLLSLKGVDYSIILPFSKEIKNLSSEDFI-KVLLNTIPISCICVGSNFFFGKDRMGNIN 138

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L   GEKY F+   +  L    S I+SSS+IR  L  G +  A  LLGY++ I   V  
Sbjct: 139 TLLSLGEKYNFNVKIV-PLEKGNSDIISSSHIRNLLLNGEINMANDLLGYKYFINGVVEK 197

Query: 199 GEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G+ +G  +GFPT N++     ++ K G+Y  + + + +  Y+     G+ PT      L 
Sbjct: 198 GDNLGSKIGFPTVNVKYNKEKLIPKAGIYKGKVKIK-KNIYNAAIYIGKRPTFH-GKELR 255

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +E++I DFS  +YG+   ++  DY+RP+ KF  IE LK  + +D +     ++ 
Sbjct: 256 VEAYIIDFSDYLYGEEIEIALEDYIRPDQKFDSIEALKRQIQKDLQAIEDKIKK 309


>gi|297588439|ref|ZP_06947082.1| possible FAD synthetase [Finegoldia magna ATCC 53516]
 gi|297573812|gb|EFH92533.1| possible FAD synthetase [Finegoldia magna ATCC 53516]
          Length = 308

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 12/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +    + N  +        + +GNFDG+HL H  ++ + + +       V+ F  H  
Sbjct: 1   MQIIDLDKDNVKINID----AITLGNFDGLHLAHQKLINKCVSL---GKSGVIIFKSHTS 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            I++       +     +  +L++M     +   F     +   E+F+  V  E    K 
Sbjct: 54  EILE-DDKFKNILITDDKINLLKRMNVDYCLIKSFDKAFLSLKPEEFLDYV-KEHTNFKN 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F+FG + +G+   L+   + + +    ID+   N    + S+ IR  L  G + 
Sbjct: 112 LVVGKDFKFGINASGNVSTLENYQKVFNYKLYIIDDQFIN-GVPIRSTTIRKFLINGEIE 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           NA  +L   F+I   VI G+  GR LG+PTAN++    I+   GVY       D   Y G
Sbjct: 171 NANSMLYRPFSINGVVIDGKHRGRNLGYPTANLECKEYIIPAAGVYYT-NVIYDNKLYKG 229

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T   +  + +E+ I DF  ++YG+  T+ F   +R  +KF    +L   +  
Sbjct: 230 ITSIGENLTYDEH-DVKIETHILDFKGDLYGKELTLVFIKKIRDNVKFNSEIELINKLKS 288

Query: 301 DEKKARK 307
           D   A+ 
Sbjct: 289 DYNFAKN 295


>gi|86148865|ref|ZP_01067122.1| hypothetical protein MED222_01182 [Vibrio sp. MED222]
 gi|85833349|gb|EAQ51550.1| hypothetical protein MED222_01182 [Vibrio sp. MED222]
          Length = 222

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 120/226 (53%), Gaps = 6/226 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKAQHHGCVLTIGNFDGVHLGHQEVLSQVSKQATALGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +         L+    +   L K+  S L+   F    A+ SA+ FI+++LV+ L V
Sbjct: 58  PMELFAKGRAPARLTRLRDKYVQLSKLEISRLLCVNFNQYFASLSAKAFIKELLVDKLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G  F FGK R G+  +L++ GEKYGF  V       N+ + VSS+ IR AL    
Sbjct: 118 KFLVVGDDFCFGKGRTGNFAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIRNALAAND 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           ++++A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    G
Sbjct: 177 LVSSATMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSG 222


>gi|269303196|gb|ACZ33296.1| riboflavin biosynthesis protein RibF [Chlamydophila pneumoniae
           LPCoLN]
          Length = 306

 Score =  246 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 8/305 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +EI  SL +      V +G FDG HLGH  +L      +      V++F+ HP+T++ S 
Sbjct: 1   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYS--GSSGVITFDSHPQTVL-SL 57

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    ++    + ++L+      L    F L  AN SAE+F+  +L   L+ K +I G  
Sbjct: 58  NHTKLINTKEERLQLLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGYD 116

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
              GK++  +   L   G+  G   + I   R +    VSS  IR  L+ G++  A   L
Sbjct: 117 SCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMDNIV-VSSKAIRQFLSAGNLECAHRFL 175

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + I   +  G  IG +LGF T N+     ++   GVYA   R  D T+  GV N G 
Sbjct: 176 GHPYAISGKITEGSGIGSSLGFATINLPREESLIPL-GVYACEIRY-DSTTCQGVMNLGT 233

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L   + +D   A+
Sbjct: 234 APTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETLIRAIEKDILDAQ 292

Query: 307 KILES 311
                
Sbjct: 293 DWFAK 297


>gi|15618240|ref|NP_224525.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae CWL029]
 gi|15835855|ref|NP_300379.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae J138]
 gi|4376597|gb|AAD18469.1| FAD Synthase [Chlamydophila pneumoniae CWL029]
 gi|6672048|dbj|BAA88661.1| FAD synthase [Chlamydophila pneumoniae]
 gi|8978694|dbj|BAA98530.1| FAD synthase [Chlamydophila pneumoniae J138]
          Length = 308

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 8/305 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +EI  SL +      V +G FDG HLGH  +L      +      V++F+ HP+T++ S 
Sbjct: 3   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYS--GSSGVITFDSHPQTVL-SL 59

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    ++    + ++L+      L    F L  AN SAE+F+  +L   L+ K +I G  
Sbjct: 60  NHTKLINTKEERLQLLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGYD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
              GK++  +   L   G+  G   + I   R +    VSS  IR  L+ G++  A   L
Sbjct: 119 SCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMDNIV-VSSKAIRQFLSAGNLECAHRFL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + I   +  G  IG +LGF T N+     ++   GVYA   R  D T+  GV N G 
Sbjct: 178 GHPYAISGKITEGSGIGGSLGFATINLPREESLIPL-GVYACEIRY-DSTTCQGVMNLGT 235

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L   + +D   A+
Sbjct: 236 APTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETLIRAIEKDILDAQ 294

Query: 307 KILES 311
                
Sbjct: 295 DWFAK 299


>gi|33241665|ref|NP_876606.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae TW-183]
 gi|33236174|gb|AAP98263.1| riboflavin kinase [Chlamydophila pneumoniae TW-183]
          Length = 306

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 8/305 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +EI  SL +      V +G FDG HLGH  +L      +      V++F+ HP+T++ S 
Sbjct: 1   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYS--GSSGVITFDSHPQTVL-SL 57

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    ++    + ++L+      L    F L  AN SAE+F+  +L   L+ K +I G  
Sbjct: 58  NHTKLINTKEERLQLLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGYD 116

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
              GK++  +   L   G+  G   + I   R +    VSS  IR  L+ G++  A   L
Sbjct: 117 SCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMDNIV-VSSKAIRQFLSAGNLECAHRFL 175

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + I   +  G  IG +LGF T N+     ++   GVYA   R  D T+  GV N G 
Sbjct: 176 GHPYAISGKITEGSGIGGSLGFATINLPREESLIPL-GVYACEIRY-DSTTCQGVMNLGT 233

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L   + +D   A+
Sbjct: 234 APTF-GRESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETLIRAIEKDILDAQ 292

Query: 307 KILES 311
                
Sbjct: 293 DWFAK 297


>gi|16752718|ref|NP_444985.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Chlamydophila pneumoniae AR39]
 gi|8163432|gb|AAF73668.1| riboflavin kinase/FMN adenylyltransferase [Chlamydophila pneumoniae
           AR39]
          Length = 308

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 8/305 (2%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +EI  SL +      V +G FDG HLGH  +L      +      V++F+ HP+T++ S 
Sbjct: 3   MEIAYSLTSSFSVDSVTVGFFDGCHLGHSNLLSILTSYS--GSSGVITFDSHPQTVL-SL 59

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           +    ++    + ++L+      L    F L  AN SAE+F+  +L   L+ K +I G  
Sbjct: 60  NHTKLINTKEERLQLLQTFPIDWLGVLTFDLNFANQSAEEFL-TLLHRNLKCKRLILGYD 118

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
              GK++  +   L   G+  G   + I   R +    VSS  IR  L+ G++  A   L
Sbjct: 119 SCIGKEQQSNTEALDTIGKPLGIEVIKIPPYRMDNIV-VSSKAIRQFLSAGNLECAHRFL 177

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G+ + I   +  G  IG +LGF T N+     ++   GVYA   R  D T+  GV N G 
Sbjct: 178 GHPYAISGKITEGSGIGGSLGFATINLPREESLIPL-GVYACEIRY-DSTTCQGVMNLGT 235

Query: 247 NPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            PT      L  E+ IF F++ +YG+  ++    +LR E KF+  E L   + +D   A+
Sbjct: 236 APTF-ERESLYAEAHIFSFAENLYGKEVSIIPRKFLREEKKFQSKETLIRAIEKDILDAQ 294

Query: 307 KILES 311
                
Sbjct: 295 DWFAK 299


>gi|197294509|ref|YP_001799050.1| Putative riboflavin kinase [Candidatus Phytoplasma australiense]
 gi|171853836|emb|CAM11785.1| Putative riboflavin kinase [Candidatus Phytoplasma australiense]
          Length = 304

 Score =  245 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +F+++ I       L    +A G+FDG+HLGH  IL++ +    ++   +++F P+ +
Sbjct: 1   MQIFNSLLIPVCF--KLPPLTLAFGDFDGLHLGHQKILQKLLSF-QDTKSALINFVPNSK 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
             +Q     F L+    +      +    L  + +  + A      FI+ +  + + VK 
Sbjct: 58  AFLQQKEDFF-LTSLEQKITFYRFLKLDYLFLWHWNQKLACLKKTDFIRLL--QKINVKR 114

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR--NNKSQIVSSSNIRTALTKGH 178
           VI   + RFG  + G+   L++     GF    ID+    N   Q +S++ I+  LT+G 
Sbjct: 115 VIITQESRFGYQKEGNYQTLKQA----GFLVDLIDDYVKPNGCQQKISTTYIKKLLTQGK 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + +A   L   + I+  VI G++ GR LGF TAN++L    L + GVYA+ F T  +  Y
Sbjct: 171 IDDANLYLSRPYKIQGKVIQGKQRGRLLGFRTANLELINFFLPRLGVYAV-FVTYKKEKY 229

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G+AN G  PT       LLE  + +F Q +Y Q   V F  +LR E KF+++ +L   +
Sbjct: 230 AGIANLGVRPTFEQKPQKLLEIHLLNFDQNLYHQTIEVEFIAFLRNEKKFENVSQLIFQI 289

Query: 299 GEDEKKARKILESS 312
            +D   A+ +L++ 
Sbjct: 290 KKDVLDAKTLLKTK 303


>gi|302380658|ref|ZP_07269123.1| riboflavin biosynthesis protein RibF [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311601|gb|EFK93617.1| riboflavin biosynthesis protein RibF [Finegoldia magna
           ACS-171-V-Col3]
          Length = 308

 Score =  245 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 8/287 (2%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            + +GNFDG+HL H  ++ + + +       V+ F  H   +++  +    +     +  
Sbjct: 17  AITLGNFDGLHLAHQKLINKCVNLGR---SGVIIFKSHTSEVLE-DNKFKNILTMDDKIY 72

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L++M     +   F  +  + + ++F+  +  E    K ++ G  F+FG + +GD   L
Sbjct: 73  LLKRMNVDYCLIKSFDKDFLSLNPKEFLNYL-KEHTNFKNLVVGNDFKFGINASGDVSTL 131

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   + + ++   ID+   N    + S+ IR  L  G V +A  +L   F+I+  V+ G+
Sbjct: 132 KNFQKVFNYNLYIIDDQFIN-GVPIRSTTIRKFLMSGDVEDANSILYRPFSIKGVVVDGK 190

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
             GR LG+PTAN++    I+   GVY       D   Y G+ + G N T   +  + +E+
Sbjct: 191 HRGRNLGYPTANLECKQYIIPAAGVYYT-NVIYDNKLYKGITSVGENLTYDEH-DVKIET 248

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            I DF  ++YG+  T+ F + +R  IKF    +L   +  D   A+ 
Sbjct: 249 HILDFKGDLYGKNLTLVFINKIRSNIKFNSEIELINKLKSDYNFAKN 295


>gi|289674846|ref|ZP_06495736.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. syringae FF5]
          Length = 228

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 2/226 (0%)

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +   G   ++   F       SA  F++ VL++ L V+ +  G  FRFG DR GD   LQ
Sbjct: 1   MSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQ 60

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           + G  YGF       +  +    VSS+ +R AL       A  +LG  F I   V+HG+K
Sbjct: 61  QAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQK 119

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           + R LG PTAN+QL    +   GVY +     D  ++ GVAN G  PT+  +G   LE  
Sbjct: 120 LARQLGTPTANVQLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHLEVH 178

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           + DF+ ++Y +R TV+F   LR E +F  +E LK  +  D   AR 
Sbjct: 179 LLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAARA 224


>gi|257063658|ref|YP_003143330.1| riboflavin kinase/FMN adenylyltransferase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791311|gb|ACV21981.1| riboflavin kinase/FMN adenylyltransferase [Slackia
           heliotrinireducens DSM 20476]
          Length = 290

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 8/294 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           G   A G FDG+H GH  +++ A +    N      L+F+  P  + +    +  L    
Sbjct: 2   GASCAFGVFDGVHKGHQFLIDSACEMARENGGASVALTFDIDPDEVFRPDK-LKKLMTNE 60

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + + L +     ++   FT E A+     F+     E + + ++  G  FRFG    G 
Sbjct: 61  ERIQALSRTCADYVVVLPFTREFASQLPMDFLATTFGEEI-IYSLHVGNDFRFGCKAQGT 119

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L+  G+  G      D L++     ++++ IR  L+ G    A  LLG+ +T    V
Sbjct: 120 VADLKAWGDGLGVRICDHD-LKSKYGSPITATRIRGLLSCGDCEVATKLLGHPYTFTGKV 178

Query: 197 IHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
           + G   G  +GF TAN++L     +L EGVYA      D   Y    + G  PT   +  
Sbjct: 179 LEGRHEGADMGFATANLELPAMRQVLGEGVYAAYGYV-DGRKYKVAMSVGVAPTF-EDAT 236

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              E+ I DF  +IYG   T+    YLRP IKF+  ++L   + ++    R+ L
Sbjct: 237 ATCEAHILDFEGDIYGDTITIEPVHYLRPMIKFESTDELIATVMDNIAWTRENL 290


>gi|295102737|emb|CBL00282.1| riboflavin kinase/FMN adenylyltransferase [Faecalibacterium
           prausnitzii L2-6]
          Length = 305

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 14/315 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M ++  +        H  G  VA+G FDGIH+GH  ++  A++ A    +   V +F   
Sbjct: 1   MQIYSQLAPLALGGAH--GSAVAMGFFDGIHIGHRAVINGAVEWARAHGAAPAVFTF--- 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            R   ++      L     +  ++  +G    +   F  E    + EQF+  ++ +    
Sbjct: 56  -RLPTENKMKGKRLLSTEDKHALIASLGVEHYLCPDF-EEIKAMTPEQFVLGIIRDC-NA 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG   AG   +L++     G   V +  +   + + VSS+ IRTAL  G 
Sbjct: 113 RALFCGENFTFGARAAGTPELLRQLCAPLGVEVVVL-PMAQFEEKPVSSTRIRTALEGGD 171

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
           +  A  +LG  + I   V HG  +GRTLG PT N +      L + G+Y  R R  D   
Sbjct: 172 IPAANAMLGMPYAIRFTVHHGAGLGRTLGVPTINQLYPQGFQLPRYGIYITRTRIGD-RW 230

Query: 238 YSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y      G  PT+  +   +  E+FI  F+ ++YG    V F  YL P  KF  +++L+ 
Sbjct: 231 YPSATGLGTRPTVNSDESKVTCETFIPGFTGDLYGTDPVVEFHAYLSPSKKFDTLDELRE 290

Query: 297 YMGEDEKKARKILES 311
            +    ++A++    
Sbjct: 291 CIDHAAQRAQEYFAE 305


>gi|169824460|ref|YP_001692071.1| riboflavin biosynthesis protein [Finegoldia magna ATCC 29328]
 gi|167831265|dbj|BAG08181.1| riboflavin biosynthesis protein [Finegoldia magna ATCC 29328]
          Length = 308

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 12/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +    + N  +        + +GNFDG+HL H  ++ + + +       V+ F  H  
Sbjct: 1   MQIIDLDKDNVKINID----AITLGNFDGLHLAHQKLINKCVSL---GKSGVIIFKSHTS 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++       +     +  ++++M     +   F  +  + + ++F+   + E    K 
Sbjct: 54  EVLE-DDKFKNILTMEDKIYLVKRMNVDYCLIKSFDRDFLSLNPKEFL-NYVKEHTNFKN 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F+FG + +GD   L+     + +    ID+   N    + S+ IR  L  G V 
Sbjct: 112 LVVGNDFKFGINASGDVSTLKNFQAVFNYKLYIIDDQFIN-GVPIRSTTIRKFLMSGDVE 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LL   F+I+  V+ G+  GR LG+PTAN++    I+   GVY       D   Y G
Sbjct: 171 DANSLLYRPFSIKGVVVDGKHRGRNLGYPTANLECKQYIIPAAGVYYT-NVIYDNKLYKG 229

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T   +  + +E+ I DF  ++YG+  T+ F + +R  IKF    +L   +  
Sbjct: 230 ITSVGENLTYDEH-DVKIETHILDFKGDLYGKNLTLVFINKIRNNIKFNSEIELINKLKS 288

Query: 301 DEKKARK 307
           D   A+ 
Sbjct: 289 DYNFAKN 295


>gi|160943257|ref|ZP_02090493.1| hypothetical protein FAEPRAM212_00743 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445496|gb|EDP22499.1| hypothetical protein FAEPRAM212_00743 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105175|emb|CBL02719.1| riboflavin kinase/FMN adenylyltransferase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 305

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 13/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +         L    KG  VA+G FDGIH+GH  ++E A+     +++   V +F   
Sbjct: 1   MQIISQF-APLPLAQPEKGTAVAMGYFDGIHIGHRAVIEGAVQWAKTHDAAPAVFTF--- 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            R  +++      L     +  ++  +G    +   F       S E+F++ + VE    
Sbjct: 57  -RLPVENKMKGKRLLSTEDKHALIHSLGVEYYLTPDF-EAIKALSPEEFVRGI-VENCHA 113

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  F FG   AG   +L+      G   V +  +   + + VSS+ IRTAL  G 
Sbjct: 114 RALFCGENFTFGAKAAGTPELLRTLCAPLGVEVVVV-PMAQFEEKPVSSTRIRTALEGGD 172

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN-MQLSPDILLKEGVYAIRFRTQDQTS 237
           +  A  +LG  + I   V HG  +G TLG PT N +      + + G+Y  R        
Sbjct: 173 IPAANAMLGMPYAIRFAVQHGAGLGHTLGVPTINQLYPQGFQMPRSGIYITRTCING-VW 231

Query: 238 YSGVANFGRNPTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y      G  PT+  +   +  E+FI  FS ++YG    V F  YL P  KF  +++L+ 
Sbjct: 232 YPSATGLGSRPTVNDDATKVTCETFIPGFSGDLYGTDPVVEFHAYLSPSKKFDTLDQLRD 291

Query: 297 YMGEDEKKARKILE 310
            + +  ++A++   
Sbjct: 292 CINDAARRAQEYFA 305


>gi|218463288|ref|ZP_03503379.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli Kim 5]
          Length = 220

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 106/219 (48%), Positives = 144/219 (65%)

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV 165
            FI  +L +WL    V+TG  F FG+ R G    L   G+ YGF    ID  R+  + +V
Sbjct: 1   DFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVV 60

Query: 166 SSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGV 225
           SSS+IR  L  G+V   A +LGYR+T+E++VI GEK+GR LGFPTANM+L P+  L  G+
Sbjct: 61  SSSHIRALLKDGNVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEAELAAGI 120

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPE 285
           YA+RFR QD T +  VA++GR PT+  NG  LLE+F+FDFS ++YGQ C VSFF Y+RPE
Sbjct: 121 YAVRFRRQDGTLHDAVASYGRRPTVTENGAPLLETFLFDFSGDLYGQLCAVSFFGYIRPE 180

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
           +KF  ++ L   +  DE++AR +L    PL + DR +CF
Sbjct: 181 LKFDGLDPLVAQIRRDEEEARALLAGVKPLGDLDRKLCF 219


>gi|213693048|ref|YP_002323634.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524509|gb|ACJ53256.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459225|dbj|BAJ69846.1| riboflavin kinase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 374

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHGAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPIFT------LSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAAQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKRIANLAVATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSGWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|268608279|ref|ZP_06142006.1| riboflavin kinase / FMN adenylyltransferase [Ruminococcus
           flavefaciens FD-1]
          Length = 291

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 10/290 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
               A+G FDG+HLGH  +L++A+    N       +F+P              +   + 
Sbjct: 5   RTSAALGLFDGVHLGHRAVLKEALAQKQNGLQPCAFTFSPESSA----GKGAKFIYGKAE 60

Query: 78  QEKILEK-MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +E I+ +      +  + F  +      E F +++L   +    V+ G  FRFG   +  
Sbjct: 61  KEYIIREICLIEEIYSHDF-EDICGMDGETFAKEILCGEMNAAHVVCGKDFRFGTGASCG 119

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              L   G KYGF    ++++     + VSS+ IR  L+ G +  A   LG  + I  +V
Sbjct: 120 TDDLAGFGRKYGFTVQTVEDVC-LGGERVSSTEIRRFLSAGELRRANLFLGKPYMIMKEV 178

Query: 197 IHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG ++GRTLGFPTAN    S  ++ K GVYA R    D   Y  + N G  PT+   G 
Sbjct: 179 SHGAQLGRTLGFPTANQVFESGQLVPKFGVYASR-TLADGKWYPSMTNIGVKPTVEYGGA 237

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            L E++I  FS ++YG+   V   D++R E +F  +++L+  +  D   A
Sbjct: 238 PLAETYIHGFSGDLYGRALQVVLLDFIRAEKRFASVDELRDQISSDVNAA 287


>gi|317482179|ref|ZP_07941202.1| riboflavin kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916413|gb|EFV37812.1| riboflavin kinase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|328955629|ref|YP_004372962.1| FMN adenylyltransferase; riboflavin kinase [Coriobacterium
           glomerans PW2]
 gi|328455953|gb|AEB07147.1| FMN adenylyltransferase ;riboflavin kinase [Coriobacterium
           glomerans PW2]
          Length = 338

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 7/299 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPP 75
           +   VAIG FDG+H+GH  ++ QA+  A +  I   V++F+P P  I+ +      L   
Sbjct: 34  RAAAVAIGVFDGVHIGHRDLIAQAVARARDQGISAVVVTFDPDPDRIVCAEPAPE-LMTT 92

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + L  +G   ++   FT E A     +F ++VL+  + ++++  G  FR G   A 
Sbjct: 93  RDRLRQLATLGVDGVLVIPFTRELAALDHVRFFEEVLLRSVRLRSIHVGADFRLGAHGAA 152

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               ++      G       EL +     V++S IR  +    +  A+  LG R+ +   
Sbjct: 153 SVERIRAWCAPRGIDV-CARELVSLGGAPVTASRIRRLIRDAEIKEASACLGRRYLVRGR 211

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN- 253
           V  G   G  +GFPTAN++++P++ L  +GVYA          +    N G  P    + 
Sbjct: 212 VATGRGEGTGMGFPTANVRVAPEMALPADGVYAGFASVDGCV-WPAAINIGVPPMFRDDP 270

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
               LE+ +  FS ++YG+R  ++    LR    F  IE L   +  D  + R  L  S
Sbjct: 271 RSAHLEATLLGFSGDLYGRRIALTIDRRLRAAEVFPSIEDLTAQVLADIDRVRADLGES 329


>gi|296454831|ref|YP_003661975.1| riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184263|gb|ADH01145.1| Riboflavin kinase / FAD synthetase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 374

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHGAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAVATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSGWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITDEWIDLYGHKVRVEFIGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|224155008|ref|XP_002337549.1| predicted protein [Populus trichocarpa]
 gi|222839552|gb|EEE77889.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 21/268 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M +F       + P       V IGNFDG+H GH  +L    A       P  VL+F PH
Sbjct: 160 MKIFRGF----NHPGRESACAVTIGNFDGVHRGHQAMLALLSAEAAQRGVPTCVLTFEPH 215

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   LE+ G    +   F    A+ S + FI +VLV
Sbjct: 216 PRDYFAQTLGRPEIAPARIGTLRDKLSELERCGVDQTVVLPFNQTLASQSPQAFIDEVLV 275

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L  K V+ G  FRFG  RAGD  +L   G++ GF    ++    +    VSS+++R A
Sbjct: 276 AGLGAKYVLVGDDFRFGAQRAGDYAMLDAAGQRQGFDVARMNSYEVH-GLRVSSTHVRAA 334

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL---------GFPTANMQLSPDILLKEG 224
           L +G + +AA LLG+ +TI   V+HG K+GR+L         GF T N++ +       G
Sbjct: 335 LAEGRMQDAARLLGHPYTISGHVVHGRKLGRSLAESRQGAGDGFRTLNLRFNHWKPAASG 394

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMVP 252
           ++A+     ++    GVAN G  P++ P
Sbjct: 395 IFAVLVHGLNERPLRGVANLGVRPSLDP 422


>gi|72161186|ref|YP_288843.1| riboflavin kinase / FMN adenylyltransferase [Thermobifida fusca YX]
 gi|71914918|gb|AAZ54820.1| riboflavin kinase / FMN adenylyltransferase [Thermobifida fusca YX]
          Length = 317

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 16/310 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPI 69
            +P   K   V +G FDG+H GH  +L QA + A+    P+  ++F+P    +  +  P 
Sbjct: 11  EVPADCKRSAVIVGTFDGVHRGHQRLLHQAREHADRLGLPLVAVTFDPPLGLVAGTLDPP 70

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L+    +  +L + G  A+   + T + A   +     ++LV+ +     +   +   
Sbjct: 71  VVLTGAEYRAGLLAQHGVDAVCVLEATPDLAALPSRDLAHRILVDGVPAAVALLAEEDDD 130

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G     D   +   G+++ F  V +     +  + V+++ +R+ +  G V  A   LG  
Sbjct: 131 GV--VFDLAAVHALGKEHDFSVVGLAA--GSGPEAVTAAQVRSLVLAGDVAGAHTALGRP 186

Query: 190 FTIESDVIHGEKIGRTL-GFPTANMQLSPD-ILLKEGVYAIRFRTQDQ------TSYSGV 241
             +E  V+HG   GR L GFPTAN+   P   +  +GVYA      D         +   
Sbjct: 187 HRVEGVVVHGAARGRELLGFPTANLDCPPRSAVPADGVYAGWLLRLDTPPEGTEARWPAA 246

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NPT        +E++  D    E+YG    V F  ++RP ++F  I++L   M  
Sbjct: 247 VSVGTNPTF-DGQVRTVEAYALDRDDLELYGLPMAVEFTHHIRPMLRFDSIDELIEAMQR 305

Query: 301 DEKKARKILE 310
           D  + R++L 
Sbjct: 306 DVDRCRELLA 315


>gi|23336293|ref|ZP_00121516.1| COG0196: FAD synthase [Bifidobacterium longum DJO10A]
 gi|189440608|ref|YP_001955689.1| FAD synthase [Bifidobacterium longum DJO10A]
 gi|189429043|gb|ACD99191.1| FAD synthase [Bifidobacterium longum DJO10A]
          Length = 374

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 153/372 (41%), Gaps = 68/372 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITDEWIDLYGHKVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKAR 306
              +  + ++ +
Sbjct: 359 VDELKRNVEETK 370


>gi|261367195|ref|ZP_05980078.1| riboflavin biosynthesis protein RibF [Subdoligranulum variabile DSM
           15176]
 gi|282570793|gb|EFB76328.1| riboflavin biosynthesis protein RibF [Subdoligranulum variabile DSM
           15176]
          Length = 310

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 17/318 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M ++H +    +     +G  VA+G FDG+H GH ++L  A++ A  + +     +F   
Sbjct: 1   MQIYHTMTPVHTA----QGCAVALGYFDGVHCGHRMVLGSAVRYAAENGLTPAAFTFELP 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
               ++       +  P  +   +E +G    +   F     + S E F+QKVLV+    
Sbjct: 57  GNQTLKGG----RILSPVQKHIRIESLGIEQYLEPPF-EAFRDLSPEDFVQKVLVDCFRA 111

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K V  G  F FG   AGD  +L    E  G     +  +    +Q VSS+ IR AL +G 
Sbjct: 112 KAVFCGKNFTFGARAAGDVEMLHALCEPRGISVHIV-PMAQYGAQAVSSTRIRAALEEGR 170

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-LKEGVYAIRFRTQDQT 236
           + +A  +LG  + I+  V HG+ +G + LG PT N    PD L    GVY  R    D  
Sbjct: 171 LDDANAMLGAPYAIDWTVTHGKGVGTSRLGTPTVNQNYPPDALQPCTGVYLTRI-LLDGH 229

Query: 237 SYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
            +      GR PT+    N  +  E+++ DFS  +YGQ   + F  Y  P  KF+ +++L
Sbjct: 230 WWPAATGIGRRPTVDDSANAAVTCETYVPDFSGNLYGQNPVLEFHRYFCPVRKFRTLQEL 289

Query: 295 KIYMGEDEKKARKILESS 312
              +    ++++    + 
Sbjct: 290 SDLIHRAARESKDYFAAQ 307


>gi|227546515|ref|ZP_03976564.1| possible FAD synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227213064|gb|EEI80943.1| possible FAD synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 374

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 153/372 (41%), Gaps = 68/372 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWVISHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITDEWIDLYGHKVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKAR 306
              +  + ++ +
Sbjct: 359 VDELKRNVEETK 370


>gi|303233665|ref|ZP_07320319.1| riboflavin biosynthesis protein RibF [Finegoldia magna BVS033A4]
 gi|302495099|gb|EFL54851.1| riboflavin biosynthesis protein RibF [Finegoldia magna BVS033A4]
          Length = 308

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 12/307 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +    + N  +        + +GNFDG+HL H  ++ + + +       V+ F  H  
Sbjct: 1   MQIIDLDKDNVKINID----AITLGNFDGLHLAHQKLINKCVSL---GKSGVIIFKSHTS 53

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++       +     +  ++++M     +   F  +  + + ++F+   + E    K 
Sbjct: 54  EVLE-DDKFKNILTMEDKIYLVKRMNVDYCLIKSFDKDFLSLNPKEFL-NYVKEHTNFKN 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F+FG + +GD   L+     + +    I +   N    + S+ IR  L  G V 
Sbjct: 112 LVVGNDFKFGINASGDVSTLKNFQAVFNYKLYIIGDQFIN-GVPIRSTTIRKFLMSGDVE 170

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           +A  LL   F+I+  V+ G+  GR LG+PTAN++    I+   GVY       D   Y G
Sbjct: 171 DANSLLYRPFSIKGVVVDGKHRGRNLGYPTANLECKQYIIPAAGVYYT-NVIYDNKLYKG 229

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + + G N T   +  + +E+ I DF  ++YG+  T+ F + +R  IKF    +L   +  
Sbjct: 230 ITSVGENLTYDEH-DVKIETHILDFKGDLYGKNLTLVFINKIRNNIKFNSEIELINKLKS 288

Query: 301 DEKKARK 307
           D   A+ 
Sbjct: 289 DYNFAKN 295


>gi|302335783|ref|YP_003800990.1| riboflavin biosynthesis protein RibF [Olsenella uli DSM 7084]
 gi|301319623|gb|ADK68110.1| riboflavin biosynthesis protein RibF [Olsenella uli DSM 7084]
          Length = 355

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 87/291 (29%), Positives = 127/291 (43%), Gaps = 5/291 (1%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
               IG FDG H GH  ++   I  A        V++F+P P +++   +    L     
Sbjct: 56  ACCVIGVFDGFHRGHQALVATTIADARARGCLSAVVTFDPDPASVLGHKAISTELLSARD 115

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + L      A++   FT E +  S   F   VL E L   ++  G+ FR G   AGD 
Sbjct: 116 RVRALAAAAPDAILVLDFTEELSATSYRAFFSDVLGEALRPVSLHVGSDFRLGAQGAGDV 175

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L++ G   G      D L       VSS+ +R  L +G V  AA LLG    +   V 
Sbjct: 176 SALRELGRFCGMDVFGHD-LVAEGDVKVSSTRVRNLLHEGRVERAAQLLGRCHFVRGVVT 234

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
           HG   G +LGFPTAN+++ P+  +  EGVYA     +   ++    N G  PT     P 
Sbjct: 235 HGRGEGSSLGFPTANVRVRPEACMPAEGVYAC-LYIEGGRAWPAAVNVGSPPTFADPDPS 293

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            LE+ +  F  ++YG   TV F  +LR    F   E+L+  +  D    R 
Sbjct: 294 FLEANLIGFDGDLYGSEATVIFVRWLRASRPFDSTEELERVVLGDIDWVRT 344


>gi|291457241|ref|ZP_06596631.1| protein RibF [Bifidobacterium breve DSM 20213]
 gi|291381076|gb|EFE88594.1| protein RibF [Bifidobacterium breve DSM 20213]
          Length = 374

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E + + P+  + K  VV +G FDG+HLGH  ++ + +++A+       V+
Sbjct: 1   MEITHLTPDAEGSIAWPSFSNDKKAVVTLGAFDGMHLGHQAVINRVVELAHRHDAFSIVI 60

Query: 54  SFNPHPRTII------------QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +             QS+     L+    + + LE+ G   ++   +TL  A+
Sbjct: 61  LFDPRPAFVHGWAGAHNGEEPTQSNVDADALTGIDERLRRLEEFGVDHVLVVHYTLAFAD 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK RAGD   +       G F    +D+    
Sbjct: 121 KSYIFFLGQLT-GKLGMRTLVLGQDAAMGKGRAGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFRPEAPTEWGEPADPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE  V+HGE+ GRT+GFPTAN+       +  +GVYA      D   +
Sbjct: 240 QDANAILGVPHAIEGKVVHGEERGRTIGFPTANLGSETQGYIPVDGVYAGWLVDGDN-RW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   D   ++YG    V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLHERVVEAYAITDDWLDLYGHNVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VAELKRNVEETKRL 372


>gi|15643620|ref|NP_228666.1| riboflavin kinase/FMN adenylyltransferase [Thermotoga maritima
           MSB8]
 gi|37926833|pdb|1MRZ|A Chain A, Crystal Structure Of A Flavin Binding Protein From
           Thermotoga Maritima, Tm379
 gi|37926834|pdb|1MRZ|B Chain B, Crystal Structure Of A Flavin Binding Protein From
           Thermotoga Maritima, Tm379
 gi|52695651|pdb|1T6X|A Chain A, Crystal Structure Of Adp Bound Tm379
 gi|52695652|pdb|1T6X|B Chain B, Crystal Structure Of Adp Bound Tm379
 gi|52695653|pdb|1T6Y|A Chain A, Crystal Structure Of Adp, Amp, And Fmn Bound Tm379
 gi|52695654|pdb|1T6Y|B Chain B, Crystal Structure Of Adp, Amp, And Fmn Bound Tm379
 gi|52695655|pdb|1T6Z|A Chain A, Crystal Structure Of Riboflavin Bound Tm379
 gi|52695656|pdb|1T6Z|B Chain B, Crystal Structure Of Riboflavin Bound Tm379
 gi|56553709|pdb|1S4M|A Chain A, Crystal Structure Of Flavin Binding To Fad Synthetase From
           Thermotoga Maritina
 gi|56553710|pdb|1S4M|B Chain B, Crystal Structure Of Flavin Binding To Fad Synthetase From
           Thermotoga Maritina
 gi|4981391|gb|AAD35939.1|AE001752_6 riboflavin kinase/FMN adenylyltransferase [Thermotoga maritima
           MSB8]
          Length = 293

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +L    +IA        + + +  P        P   L     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP-EYFLPDFP-GLLMTVESR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +   +  +   F     + + E F+++ L     V  V+ G  FRFGK+ +G+  
Sbjct: 60  VEMLSRY--ARTVVLDF-FRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNAS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     I+++   + + VSSS IR  + +G V      LG  F IE  V  
Sbjct: 114 FLR----KKGVEVYEIEDVVV-QGKRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHK 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+     +
Sbjct: 169 DREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YGQR  +    ++R E KF  IE+LK  + +D K AR +++ 
Sbjct: 229 KYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDD 283


>gi|239621512|ref|ZP_04664543.1| riboflavin kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239515387|gb|EEQ55254.1| riboflavin kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 374

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 155/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG   +IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHSIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|269215366|ref|ZP_06159220.1| riboflavin biosynthesis protein RibF [Slackia exigua ATCC 700122]
 gi|269131222|gb|EEZ62296.1| riboflavin biosynthesis protein RibF [Slackia exigua ATCC 700122]
          Length = 319

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 8/296 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L G   A G FDG+HLGH  +++QAI+ A         L+F+  P  +  +   +  L  
Sbjct: 16  LSGASCAFGVFDGVHLGHRFLIDQAIETARKSGGAAVALTFDVDPDELFHADR-LKKLMG 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + + L + G   ++   FT + A  +  +F++      +    +  G  FRFG   A
Sbjct: 75  NERRLRALAETGADYVVVLTFTEDFAAQAPAEFLEATFGGCVPYA-LHVGADFRFGARAA 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+      G   +   EL+    + + ++ IR  L +G   +AA LLG+ +  + 
Sbjct: 134 GTVADLEAWASAGGTR-ICAHELKGADGRPIRATRIRLLLAEGRCEDAAALLGHPYVFDG 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
           +V  G   G  +GF TAN++L   +  L EGVYA      D   Y    + G  PT    
Sbjct: 193 EVRKGRGEGADMGFRTANLELPAMLQTLGEGVYAAWATV-DGARYRAAMSVGAAPTF-EA 250

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                E  I DF  +IYG    V    +LRP I+F  +++L   +  +    R+ L
Sbjct: 251 ATATCEVNILDFLGDIYGDSIEVEPVRFLRPMIRFSSVDELIATVKGNIAWVRENL 306


>gi|256827227|ref|YP_003151186.1| riboflavin kinase/FMN adenylyltransferase [Cryptobacterium curtum
           DSM 15641]
 gi|256583370|gb|ACU94504.1| riboflavin kinase/FMN adenylyltransferase [Cryptobacterium curtum
           DSM 15641]
          Length = 309

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 7/294 (2%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSP 74
             G     G FDG+H GH  +++ A K A+ +     VL+F+  P  I         LS 
Sbjct: 16  FAGSSCCFGVFDGVHTGHRFLIDAAKKAAHEAGSRSIVLTFDRDPDEIFAPDKLKKLLSN 75

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  +L + G +A+    FT   A  S + F++K          +  G  F FG    
Sbjct: 76  -EDRLALLAQSGVNAVCVLPFTRTLAALSPQDFLEKTF-GVYSPAFLHVGCDFAFGARAQ 133

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    LQ    + G   +   +L++    I++++ IR  L  G V  A  L+G  + +  
Sbjct: 134 GTVDDLQTWAHQSGTS-ICAYDLKSADGDIITATRIRGLLADGWVEEANRLIGRAYALHE 192

Query: 195 DVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V  G   GR  GF TAN+ +  +  ++ EGVYA          Y+   + G  PT   +
Sbjct: 193 TVRPGRSDGRDFGFRTANLTVPSERFVVAEGVYAGYAIVAG-KRYAAAISNGVAPTFADS 251

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               +E  I DF QE+YG+   V F   LRP ++F   ++L   +  + +  R 
Sbjct: 252 TTANVEVHILDFDQEMYGETIWVEFHHRLRPMMRFSSTQELIDTVMGNIQWVRD 305


>gi|307592349|ref|YP_003899940.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
 gi|306985994|gb|ADN17874.1| riboflavin biosynthesis protein RibF [Cyanothece sp. PCC 7822]
          Length = 356

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 50/338 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAI-----KIANNSP------------------ITVL 53
                VAIGNFDGIH GH  +L+  +     +I  N                     TV+
Sbjct: 5   FTPTTVAIGNFDGIHCGHQQVLQPILNSAGHQIPKNGCQNQFFSFSTECNETQIYYPTVV 64

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +FNPHP+           L+P   + K L  +G   ++   F  E A  S +QF++K+LV
Sbjct: 65  TFNPHPKQFFSRQHRP-LLTPLQEKIKQLLSLGIKQVVPLTFNEELATISPQQFVEKILV 123

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L+ + +  G  FRFG  R G    LQ+    +G     +      K + +SSS IR +
Sbjct: 124 QQLKAQKISVGHDFRFGYQRKGTATDLQEIAGSFGIPVTIVPPYTY-KGERISSSLIRQS 182

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRT 232
           L +G++     LLG  +T++      +++G    F    ++L  + +L + G YA R   
Sbjct: 183 LEQGNLQYIKALLGRSYTLQGFTEKQQEMGD---FSRIKLKLPSEKLLPRPGSYAARVFI 239

Query: 233 QDQTS--------------------YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
           +D                       Y G+ N   N   +      +E ++ D+  ++ GQ
Sbjct: 240 EDANQTALETAILKNLSCQFSFPLLYQGIVNI-NNFFGINEEESYVEIYLLDWPGDLQGQ 298

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             T+    +LRP+++F  +E LK  +  D   A+ +L+
Sbjct: 299 TITIELEYFLRPQLEFTSLEALKKQIQIDLSLAKVMLD 336


>gi|194476617|ref|YP_002048796.1| putative riboflavin kinase/FAD synthase [Paulinella chromatophora]
 gi|171191624|gb|ACB42586.1| putative riboflavin kinase/FAD synthase [Paulinella chromatophora]
          Length = 321

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 11/309 (3%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPI 69
           +S    +K   VA+G+FDG+H GH  ++    + +    + TV+SF PHPR ++    P 
Sbjct: 6   RSPQEAVKPTAVAVGSFDGLHKGHRRVITNISENSTTIGVPTVVSFWPHPREVLYGD-PR 64

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L  P+ +  +LE +G   L+   F+   A  + E F+++VL + L    V  G  FRF
Sbjct: 65  LRLDMPAEKLTLLESLGIKQLVLVPFSERLAELTPEIFVRQVLKQQLGALKVAVGKNFRF 124

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G +R+GD   L +  ++ G     +  +  + ++ VSSS IR AL +G +  A  LLG  
Sbjct: 125 GVNRSGDTSALGRIAQEMGIKVEIL-PILWDGNERVSSSRIRRALGEGKIQEATRLLGRP 183

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQ-------DQTSYSGV 241
           +     V++   + R  G PT  + +     L ++G+YA+  R                +
Sbjct: 184 YRFSGRVVNSSDVKRNHGLPTLKVIVDGRKFLPRQGIYAVWVRLDKGDVGLSSGGPIGAI 243

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + G    + P  P  +E +  D   +    R  +     LR + +F   E     +  D
Sbjct: 244 MSLGPQSLVDPTIPSQVEVYFLDGRADFDEVRVYIEPVSLLRGQQEFWGTEGFYQQIHND 303

Query: 302 EKKARKILE 310
             +ARK LE
Sbjct: 304 IMQARKRLE 312


>gi|23466168|ref|NP_696771.1| protein RibF [includes: riboflavin kinase (flavokinase); FMN
           adenylyltransferase [Bifidobacterium longum NCC2705]
 gi|312133912|ref|YP_004001251.1| ribf [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689891|ref|YP_004209625.1| riboflavin kinase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691832|ref|YP_004221402.1| riboflavin kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|23326907|gb|AAN25407.1| protein RibF [includes: riboflavin kinase (flavokinase); Fmn
           adenylyltransferase [Bifidobacterium longum NCC2705]
 gi|311773206|gb|ADQ02694.1| RiBF [Bifidobacterium longum subsp. longum BBMN68]
 gi|320456688|dbj|BAJ67310.1| riboflavin kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320461227|dbj|BAJ71847.1| riboflavin kinase [Bifidobacterium longum subsp. infantis 157F]
          Length = 374

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 155/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWVISHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG   +IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHSIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|291516437|emb|CBK70053.1| FAD synthase [Bifidobacterium longum subsp. longum F8]
          Length = 374

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 154/374 (41%), Gaps = 68/374 (18%)

Query: 1   MHVFH---NIEINQSLPN--HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M + H   + E +   P+  + K  VV +G FDG+HLGH  ++++ +++A+       V+
Sbjct: 1   MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVI 60

Query: 54  SFNPHPRTII------QSSSPI------FTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +           P         L+    +   +E+ G   ++   +TL  A 
Sbjct: 61  LFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRMEQFGVDHVLVVHYTLAFAA 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNN 160
            S   F+ ++    L ++T++ G     GK R GD   +       G F    +D+    
Sbjct: 121 MSYIFFLGRLT-GKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPG 179

Query: 161 KSQI-----------------------------------------VSSSNIRTALTKGHV 179
           + +I                                          SS+N+R  L  G +
Sbjct: 180 EVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRI 239

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTSY 238
            +A  +LG    IE +V+HGE+ GRT+GFPTAN+       +  +GVYA       +  +
Sbjct: 240 QDANAILGAPHAIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWL-VDGENRW 298

Query: 239 SGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
               + G  PT          ++E++   +   ++Y  +  V F  +LRP++KF   ++L
Sbjct: 299 PAAISIGTKPTFSEKTGLNERVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDQL 358

Query: 295 KIYMGEDEKKARKI 308
              +  + ++ +++
Sbjct: 359 VDELKRNVEETKRL 372


>gi|253584369|ref|ZP_04861567.1| riboflavin kinase [Fusobacterium varium ATCC 27725]
 gi|251834941|gb|EES63504.1| riboflavin kinase [Fusobacterium varium ATCC 27725]
          Length = 273

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 89/274 (32%), Positives = 136/274 (49%), Gaps = 11/274 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M + ++I              VAIG FDGIH GH  ++E A++ A  +     V +F  H
Sbjct: 1   MKIINDI---FDTKEQFHNSYVAIGTFDGIHYGHQQLIEAAVEKAKENKGVSVVFTFANH 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  II +S     ++    +  ILE MG   LI   F  + A+ +A +F++ +  + ++ 
Sbjct: 58  PMEIIDASKTPKCINTLEEKIYILENMGIDYLILQPFNKKFADLTAIEFVEILKKD-VDT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G  F FG+        L + G+        I  +  +K QI+SS+ IR ++  G 
Sbjct: 117 KEIFVGFNFSFGEGGKAKTKDLIEIGKSMEIKVNEIPAVILDK-QIISSTLIRKSIQHGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA--IRFRTQDQT 236
                  LG++F I  +VIHG+KI R LGFPTAN++LS  +    G+Y   ++   +D  
Sbjct: 176 FEKVNKYLGHQFLIIGEVIHGKKIARQLGFPTANIKLSNRLYPPFGIYGAMVKIEGEDIE 235

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIY 270
            Y GV N G NPT+ P G   +E  I DF  +IY
Sbjct: 236 RY-GVVNIGVNPTLKP-GERSVEVHILDFDGDIY 267


>gi|281411513|ref|YP_003345592.1| riboflavin biosynthesis protein RibF [Thermotoga naphthophila
           RKU-10]
 gi|281372616|gb|ADA66178.1| riboflavin biosynthesis protein RibF [Thermotoga naphthophila
           RKU-10]
          Length = 293

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +L    +I+        + + +  P      + P   L     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEISFFKKDDSLIYTISYPP-EYFSPNFP-GLLMTVESR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +   +  +   F     + + E+F+++ L     V  V+ G  FRFGK+ +GD  
Sbjct: 60  VEMLSRY--ARTVVLDF-FRIKDLTPEKFVERYLS---GVSAVVVGRDFRFGKNASGDTS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     I+++   +   VSSS IR  + KG        LG  F IE  V  
Sbjct: 114 FLR----KKGVEVYEIEDIVV-QGIRVSSSLIRDLVQKGRAEEIPVYLGRYFEIEGIVHR 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+     +
Sbjct: 169 DREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YG++  +    ++R E KF  IE+LK  + +D K AR I++ 
Sbjct: 229 KYEVYILDFEGDLYGKKLKLEVLKFMREEKKFDSIEELKAAIDQDVKNARNIIDD 283


>gi|269123533|ref|YP_003306110.1| riboflavin biosynthesis protein RibF [Streptobacillus moniliformis
           DSM 12112]
 gi|268314859|gb|ACZ01233.1| riboflavin biosynthesis protein RibF [Streptobacillus moniliformis
           DSM 12112]
          Length = 339

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 30/318 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  +V +GNFDG+HLGHH I+ +A+++    N  + + +F    R           ++  
Sbjct: 30  EKNIVVLGNFDGVHLGHHKIINEALELGKKLNQKVLIYTF----REY--PKKKDTLITTL 83

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           S +  I EKM    +   +F  +    S E F+  +L++ L    +  G  + FG  + G
Sbjct: 84  SEKLYIFEKMNLDYIYLEEF-FDVNELSPEDFVNNILIDKLNASEIFCGFNYSFGNRKKG 142

Query: 136 DR----GILQKRGEKYGFHTV----------FID-----ELRNNKSQIVSSSNIRTALTK 176
           D      +L+ + +    + V           +D     +  +    ++SS+ I+T +  
Sbjct: 143 DVIKLNELLKGKIKVNVINPVLFNLKTDELKIVDIKELKDYLDKDYCLISSTFIKTLIEN 202

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G +     LLG+ + I   V+HG+K+ RTLGFPTAN+     I     VY +R   +   
Sbjct: 203 GKMSYVKKLLGHEYIIMGKVVHGKKLARTLGFPTANLLSRNKIYPLFAVYGVRTHIEGYD 262

Query: 237 S-YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ N G+NPT+   G L +E+ IFDF ++IY +   V   + +R E K   +E+LK
Sbjct: 263 RAYYGIMNIGKNPTIDNEG-LHIETHIFDFDEDIYDKVIVVDLLENIRLERKMCSLEELK 321

Query: 296 IYMGEDEKKARKILESSY 313
             +  D+K  ++ +   Y
Sbjct: 322 KQILMDKKIWKEKIYDKY 339


>gi|289449798|ref|YP_003474591.1| riboflavin biosynthesis protein RibF [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184345|gb|ADC90770.1| riboflavin biosynthesis protein RibF [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 787

 Score =  238 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 7/288 (2%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + +G FDG+H GH  +L   I        +  V +F+  P+   +       L     + 
Sbjct: 57  LCLGFFDGVHQGHRELLRTLIYECGKHGYSPDVWTFDTLPK-FKRPGIVTGLLQTKEQRL 115

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             L  +G +     KFT   A+ S E F+ KV++  L VK ++ G  FRFG + +     
Sbjct: 116 HDLASIGVARTFIQKFTPALADLSGEDFLTKVVLPNLPVKLIVVGYDFRFGHNMSWGVEE 175

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L     ++      +  +    ++ V S+ IRTA+  G +  AA L G  FT+   VI G
Sbjct: 176 LANFSREHNIELRVVPPVTI-GTETVHSAKIRTAIAAGDLSLAAKLSGRHFTLAGRVIKG 234

Query: 200 EKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-GPLL 257
             IGR LGF TAN+ +    +L   GVY    R   +  Y  ++  G  PT+      L 
Sbjct: 235 NAIGRELGFATANILVDESRVLPPHGVYRSLTRVNGRA-YRSISFLGIRPTVNEKQKHLQ 293

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           LE+ IFD + ++YG    V  +++++PE  F D+  LK  + +    A
Sbjct: 294 LETHIFDAAIDLYGSEINVELWEFMQPEKSFADLASLKSAIKQYCATA 341


>gi|170287877|ref|YP_001738115.1| riboflavin biosynthesis protein RibF [Thermotoga sp. RQ2]
 gi|170175380|gb|ACB08432.1| riboflavin biosynthesis protein RibF [Thermotoga sp. RQ2]
          Length = 293

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +L    +IA        + + +  P        P   L     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP-EYFSPDFP-GLLMTVESR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +   +  +   F     + + E F+++ L     V  V+ G  FRFGK+ +G+  
Sbjct: 60  VEMLSRY--ARTVVLDF-FRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNVSGNAS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     I+++   + + VSSS IR  + +G V      LG  F IE  V  
Sbjct: 114 FLR----KKGIEVYEIEDVVV-QGKRVSSSLIRNLVQEGRVEEILAYLGRYFEIEGIVHK 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+     +
Sbjct: 169 DREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YG++  +    ++R E KF  IE+LK  +  D K+AR +++ 
Sbjct: 229 KYEVYILDFEGDLYGKKLKLEVLKFMRDEKKFGSIEELKAAIDHDVKRARNMIDD 283


>gi|19746179|ref|NP_607315.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS8232]
 gi|19748359|gb|AAL97814.1| putative macrolide-efflux protein [Streptococcus pyogenes MGAS8232]
          Length = 310

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFLRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKKL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L +  E        I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYLARNFEGQ---VYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|94990584|ref|YP_598684.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94544092|gb|ABF34140.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 310

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|50914296|ref|YP_060268.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|50903370|gb|AAT87085.1| Riboflavin kinase [Streptococcus pyogenes MGAS10394]
          Length = 310

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKKL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L +  E        I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYLARNFEGQ---VYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|148269215|ref|YP_001243675.1| riboflavin biosynthesis protein RibF [Thermotoga petrophila RKU-1]
 gi|147734759|gb|ABQ46099.1| riboflavin kinase / FMN adenylyltransferase [Thermotoga petrophila
           RKU-1]
          Length = 293

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +L    +IA        + + +  P      + P   L     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP-EYFSPNFP-GLLMTVESR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            ++L +   +  +   F     + + E F+++ L     V  V+ G  FRFGK+ +GD  
Sbjct: 60  VEMLSRY--ARTVVLDF-FRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGDTS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     I+++   +   VSSS IR  + KG        LG  F IE  V  
Sbjct: 114 FLR----KKGVEVYEIEDIVV-QGIRVSSSLIRDLVQKGRAEEIPVYLGRYFEIEGIVHR 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+     +
Sbjct: 169 DREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHFPDGKKKFGVMNVGFRPTVGDARNV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YG++  +    ++R E KF  IE+LK  + +D K AR I++ 
Sbjct: 229 KYEVYILDFEGDLYGKKLKLEVLKFMREEKKFDSIEELKAAIDQDVKNARNIIDD 283


>gi|210633989|ref|ZP_03297938.1| hypothetical protein COLSTE_01856 [Collinsella stercoris DSM 13279]
 gi|210158987|gb|EEA89958.1| hypothetical protein COLSTE_01856 [Collinsella stercoris DSM 13279]
          Length = 333

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 8/301 (2%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSP 68
             +P       +AIG FDG+H GH  +L++A + A    + V  ++F+P P  ++ S+ P
Sbjct: 27  DPVPGAPAPCAIAIGAFDGVHRGHLDLLQRAKRDARERGLAVVAVTFDPDPDEVV-SAHP 85

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+  + + + L   G   +    FT E A      F ++VL  +LEV+ V  G  FR
Sbjct: 86  APKLTSMADRVRALASAGA-GVAIVPFTRELAALDHIGFFERVLAPYLEVRVVHVGADFR 144

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            G   A    +++  G   G   +   EL ++    ++++ IR+ +  G V  A   LG 
Sbjct: 145 LGAHGASTVDVMRAWGAARGMDVMG-HELLSDGDAPITATRIRSLIAAGDVCAARRELGR 203

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRN 247
           R  +   V  G   G  +GFPTAN+++   + +  +GVYA  F   D   +    N G  
Sbjct: 204 RPFVRGVVKRGRGQGTGMGFPTANIEVPGGMQMPADGVYAG-FALVDGAVWPAAINAGVP 262

Query: 248 PTMVPN-GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P    +     LE+ +  +  ++YG+   ++F   +RP   F  +E+L   +  D    +
Sbjct: 263 PMFADSAASARLEANLIGYRGDLYGKTVAIAFDRLVRPSHSFDSVEELIAAVNRDIATIK 322

Query: 307 K 307
           K
Sbjct: 323 K 323


>gi|299144052|ref|ZP_07037132.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298518537|gb|EFI42276.1| riboflavin biosynthesis protein RibF [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 304

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V   I+I+++    ++  ++A+GNFDG+HL H  +L + +  +   N   ++L F  H
Sbjct: 1   MQV---IKIDENY-QAVEESIIALGNFDGVHLAHKKLLLKLVSESKKLNLKSSILIFKNH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            +  I +      L+    + ++L  +G   +    F       S  +FI+K L + L+ 
Sbjct: 57  TKDTIYNKKQ-RLLTSNKQKFEMLRNIGIDIIYEIIFDDSIMKISPVEFIEKFLYKNLKA 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  ++FG    GD  +L+    K       ID +      IVSSS IR  +  G+
Sbjct: 116 RGIVAGYDYKFGYMAKGDIELLKNLSLKNNIKNFIIDAV-IFDGIIVSSSTIRNFIEDGN 174

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS 237
           +  A  LLGY +TI   +IHG+ +G   G+PTAN+Q+    ++ K GVY    + ++   
Sbjct: 175 IEMANKLLGYNYTITGKIIHGKNLGTKNGYPTANIQIDTNYVIPKFGVYDSDIKIKN-KV 233

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y   +N G+NPT+  NG L +ES I +F++ IYG+   +    +LRPE KF +I++L   
Sbjct: 234 YKAASNIGKNPTIENNG-LRIESHILNFNKNIYGETVDLILLKFLRPESKFLNIDELFEK 292

Query: 298 MGEDEKKARK 307
           + ED  K + 
Sbjct: 293 IKEDVNKVKN 302


>gi|15675210|ref|NP_269384.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes M1 GAS]
 gi|71910773|ref|YP_282323.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS5005]
 gi|94988694|ref|YP_596795.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94992517|ref|YP_600616.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|13622377|gb|AAK34105.1| putative macrolide-efflux protein [Streptococcus pyogenes M1 GAS]
 gi|71853555|gb|AAZ51578.1| riboflavin kinase/FMN adenylyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|94542202|gb|ABF32251.1| riboflavin kinase [Streptococcus pyogenes MGAS9429]
 gi|94546025|gb|ABF36072.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS2096]
          Length = 310

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|139473681|ref|YP_001128397.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes str. Manfredo]
 gi|134271928|emb|CAM30166.1| putative riboflavin biosynthesis protein [Streptococcus pyogenes
           str. Manfredo]
          Length = 310

 Score =  236 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYGLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|150020335|ref|YP_001305689.1| riboflavin biosynthesis protein RibF [Thermosipho melanesiensis
           BI429]
 gi|149792856|gb|ABR30304.1| riboflavin biosynthesis protein RibF [Thermosipho melanesiensis
           BI429]
          Length = 292

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 96/299 (32%), Positives = 149/299 (49%), Gaps = 18/299 (6%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPIT----VLSFNPHPRTIIQSSSPIFTLSPPS 76
           VV +G FDG+H+GH  IL +  ++A     T     + F   P    +       L P  
Sbjct: 6   VVTVGVFDGVHIGHVEILSRLKRLAEEFNSTSEIYTIVF---PMEYYKGHFD-GLLIPLE 61

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  +LE  G    +      E  +  A +F + +  +    K ++ G  FRFGK+  GD
Sbjct: 62  DRITLLEVYGEVFPLELN---EIKDIDASKFFEIISKDT---KGIVVGKDFRFGKNAKGD 115

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +L+K  +K       +++L  N  + VSS+ IR  + +G++  A  LLG  + +   V
Sbjct: 116 ISLLEKLCKKKNIKLEVVNDLTEN-GKRVSSTLIRKLIKEGNIKLANKLLGRAYPVYGKV 174

Query: 197 IHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              +++GR LGFPTAN++   + ++ K GVY  +  T     Y G+ N G  PT+     
Sbjct: 175 YKDKQLGRKLGFPTANIRRHKELVIPKFGVYLSKVYTP--KLYFGLVNIGLRPTVEKTKN 232

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
           +  E +IFDF++ IYG+   V   ++LR E KFK+I  L   M EDEK A+KILE  Y 
Sbjct: 233 VKYEVYIFDFNENIYGKEIRVELLEFLRAEEKFKNINDLINRMKEDEKLAKKILEEKYA 291


>gi|229815174|ref|ZP_04445510.1| hypothetical protein COLINT_02219 [Collinsella intestinalis DSM
           13280]
 gi|229809184|gb|EEP44950.1| hypothetical protein COLINT_02219 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 8/304 (2%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSSSPIFTLSPPSI 77
            V+AIG FDG+H GH  +L  AI  A    +    ++F+P P  ++ S+ P   L+    
Sbjct: 52  CVIAIGAFDGVHRGHADLLRHAIDDARERGVAAVAVTFDPDPDEVV-SAHPAPKLTSMDG 110

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + L  +G   +    FT + A      F + VL  +L+++ +  G+ FR G   A   
Sbjct: 111 RLRALTSIGV-RVAVVPFTRQLAALDHVAFFEGVLAPYLDIRAIHVGSDFRLGARGASTV 169

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            I+   G + G      D + +  +  ++++ IR+ + +G V +A  LLG R  +   V 
Sbjct: 170 PIIADWGTQKGIAVTGHDLILDGDA-PITATRIRSLIARGDVDSARRLLGRRPMLRGQVG 228

Query: 198 HGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN-GP 255
            G   G  +GFPTAN+++     +  +GVYA      D   +    N G  P    +   
Sbjct: 229 PGRGQGTGMGFPTANVEVPGYAQMPADGVYAGFAEV-DGAVWPAAINAGVPPMFADSVKS 287

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             LE+ +  FS ++Y ++  ++F   LRP   F+ ++ L   +  D +  R+   +S   
Sbjct: 288 ARLEANLIGFSGDLYDKKVAIAFDRLLRPSHSFESVDALIEAVNRDIETVREQFGASPVR 347

Query: 316 SERD 319
             RD
Sbjct: 348 IARD 351


>gi|213584763|ref|ZP_03366589.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 215

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 2/211 (0%)

Query: 99  TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR 158
            A  +A+ FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF         
Sbjct: 1   FAALTAQTFISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFC 60

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD 218
                 +SS+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   
Sbjct: 61  E-GGVRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQ 119

Query: 219 ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
           +   +GVYA+           GVAN G  PT+       LE  + D   ++YG+   V  
Sbjct: 120 VSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVIL 178

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
              +R E +F  +++LK  +  DE  ARK  
Sbjct: 179 RKKIRNEQRFASLDELKAQIARDELTARKFF 209


>gi|21910422|ref|NP_664690.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS315]
 gi|28895998|ref|NP_802348.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes SSI-1]
 gi|21904620|gb|AAM79493.1| putative macrolide-efflux protein [Streptococcus pyogenes MGAS315]
 gi|28811248|dbj|BAC64181.1| putative macrolide-efflux protein [Streptococcus pyogenes SSI-1]
          Length = 310

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKNYRDI-NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +   D   L +  E        I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNCT-DSDYLARNFEGQ---VYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLTPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|296125681|ref|YP_003632933.1| riboflavin biosynthesis protein RibF [Brachyspira murdochii DSM
           12563]
 gi|296017497|gb|ADG70734.1| riboflavin biosynthesis protein RibF [Brachyspira murdochii DSM
           12563]
          Length = 311

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 88/295 (29%), Positives = 149/295 (50%), Gaps = 15/295 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  +V IG FD +H GH  +++  ++ A    +  +        +I+  +   ++     
Sbjct: 15  KDSIVTIGKFDSVHKGHQKLIKYTVEYAKKHNLVSI------AIVIKKKN--LSIYNTEE 66

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
               ++ +G + +I   F  E     A++F  K+ +E+  +K +  G  F FGKDR GD 
Sbjct: 67  NNSFIKALGINYIIVIDFLPEFYTMEAKEFFNKL-IEYYRMKHIAVGADFAFGKDRMGDS 125

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K  ++      FI +  N K   +SSSNIR AL+ G + +   +LG  +++   V+
Sbjct: 126 EFLKKYSKECSIGVSFI-KFLNYKGDKISSSNIREALSNGDMTSVNRMLGREYSMSGLVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVPNGP 255
           HG  +GR +G+PTAN+++   I + K GVY+   +     T Y  +   G +     N  
Sbjct: 185 HGNALGRKIGYPTANLEIPKTIFIPKMGVYSSTVKIGNGDTIYHALTFIGVS---NINKE 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L +ES + DFS+ IYG++ TV    Y+R  IK   I+++K  +  DEKK RK  +
Sbjct: 242 LRVESHLLDFSKMIYGKKITVVLLKYIRDNIKVNSIDEVKKLLENDEKKIRKYFK 296


>gi|71903598|ref|YP_280401.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS6180]
 gi|71802693|gb|AAX72046.1| riboflavin kinase [Streptococcus pyogenes MGAS6180]
          Length = 310

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + E+A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLVLGYFDGLHRGHKALFEKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +   D   L      +      I E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNCT-DSDYL---TRNFEGQVYTIKEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|94994507|ref|YP_602605.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|94548015|gb|ABF38061.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           MGAS10750]
          Length = 310

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLILGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +R  D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNRT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKVRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|306827274|ref|ZP_07460561.1| riboflavin biosynthesis protein RibF [Streptococcus pyogenes ATCC
           10782]
 gi|304430421|gb|EFM33443.1| riboflavin biosynthesis protein RibF [Streptococcus pyogenes ATCC
           10782]
          Length = 310

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFLRFSPELLLHITYPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +   D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNCT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLAPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|311064859|ref|YP_003971585.1| riboflavin kinase/FMN adenylyltransferase [Bifidobacterium bifidum
           PRL2010]
 gi|310867179|gb|ADP36548.1| RibF Riboflavin kinase/FMN adenylyltransferase [Bifidobacterium
           bifidum PRL2010]
          Length = 419

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 151/397 (38%), Gaps = 104/397 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSP------- 68
           +  VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +   ++        
Sbjct: 23  RKSVVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPG 82

Query: 69  -----IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                   L+    + + LE +G   ++  ++TL  A  S   F+ ++ V  L ++T++ 
Sbjct: 83  DGFCDPMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQM-VGKLGMRTLVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE-------------------------- 156
           GT    G +RAGD   +    +  G F    +D+                          
Sbjct: 142 GTDAAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDP 201

Query: 157 ---------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                           +  + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+
Sbjct: 202 TEGMTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEE 261

Query: 202 IGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD-------------------------- 234
            GRT+GFPTAN+  +    +  +GVYA                                 
Sbjct: 262 RGRTIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGAPADSDENASDGNSGSGNASVIP 321

Query: 235 ----------------QTSYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRC 274
                              +    + G  PT          ++E++   D   ++YG   
Sbjct: 322 RVYDSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDV 381

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            V F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 382 RVEFAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|298253043|ref|ZP_06976835.1| FAD synthase [Gardnerella vaginalis 5-1]
 gi|297532438|gb|EFH71324.1| FAD synthase [Gardnerella vaginalis 5-1]
          Length = 402

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 154/399 (38%), Gaps = 98/399 (24%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ-- 64
           IN    +  +  VV IG FDG+H GH  ++ + + +A+       V+ F+P P  +    
Sbjct: 2   INWPTLSAERKAVVTIGVFDGMHKGHREVIRRTVDLAHRHGAFSVVIMFDPRPSVVHANP 61

Query: 65  -------------SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
                           P   L+    + +++ ++    ++  +++L  A  S   F+ ++
Sbjct: 62  DLYDDFGDVNSKLPDDPDA-LTSVRQRLRVMSQLDVDHVVIVRYSLAFAAKSYRFFLGQL 120

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKSQI------ 164
            V  L ++ ++ G+    G  RAGD   +++  +  G F  + +++L  +  ++      
Sbjct: 121 -VGKLGMRALVLGSDAALGARRAGDIKAIRELSQATGVFELIEVEDLGPDDVRVPDPIVR 179

Query: 165 -----------------------------------VSSSNIRTALTKGHVLNAAHLLGYR 189
                                               SS+N+R  L  G V  A  +L   
Sbjct: 180 EVPQEPGDPKDPSDGMNKAEYRAWSKSMPNKKVRAWSSTNVRWMLATGRVKEAREILDQP 239

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-------------- 234
             +E  V+HG++ GR +GFPT N+       +  +GVYA      D              
Sbjct: 240 HRVEGTVVHGDERGREIGFPTVNLGEKIEGYVPVDGVYAGWVVDLDADNKNDVRPSKNAV 299

Query: 235 -----------------QTSYSGVANFGRNPTMVPNG----PLLLESF-IFDFSQEIYGQ 272
                               +    + G  PT   +G       +E++ +FD  +++YG 
Sbjct: 300 PDVSVLRRDELHLGVHSPWRWPAAISIGTKPTFNKDGEEDAERTVEAYGLFDDWKDLYGH 359

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           R  + F  +LRP+  F  ++ LK  +  + ++ R+I ++
Sbjct: 360 RVCIEFASFLRPQQTFDSVDALKDMLKANVEQVREITDA 398


>gi|209559515|ref|YP_002285987.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pyogenes NZ131]
 gi|209540716|gb|ACI61292.1| Riboflavin kinase / FMN adenylyltransferase [Streptococcus pyogenes
           NZ131]
          Length = 310

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 15/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I+  + + N     V+ +G FDG+H GH  + ++A ++AN     + V +F   
Sbjct: 1   MEI-EYIKDYRDI-NQEDDTVLVLGYFDGLHRGHKALFDKAREVANKEGLKVVVFTFTES 58

Query: 59  PRTIIQSSSPIFTL--SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+      SP   L  + P  + +     G + L    FT + +  S++ FI    ++ L
Sbjct: 59  PKLAFSRFSPELLLHITHPKKRYEKFADYGVNKLYLVDFTSKFSKVSSDHFITHY-IKNL 117

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + K ++ G  ++FG +   D   L      +      I+E++ +  + +S++ IR  + +
Sbjct: 118 KAKHIVVGFDYKFGHNCT-DSDYL---TRNFEGQVYTIEEIKEDH-RKISATWIRKLIQE 172

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V+ A HLLGY  +    V+HG+  GRT+GFPTAN+  +    L  +GVY +       
Sbjct: 173 GNVVKANHLLGYDLSTRGRVVHGDARGRTIGFPTANLVPIDNTYLPADGVY-VTNVIVAN 231

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y  + + G+N T      L LE  IFDF +EIYG+   + + D +R   KF+ IE L 
Sbjct: 232 KIYRSMTSLGKNVTF-GGKELRLEVNIFDFDEEIYGEIIEIVWLDKIRDMEKFEGIEDLT 290

Query: 296 IYMGEDEKKARKI 308
             +  D++ A   
Sbjct: 291 DRLEYDKRTALNW 303


>gi|262276790|ref|ZP_06054583.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HIMB114]
 gi|262223893|gb|EEY74352.1| riboflavin biosynthesis protein RibF [alpha proteobacterium
           HIMB114]
          Length = 302

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/313 (31%), Positives = 161/313 (51%), Gaps = 14/313 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M +  N + N     + K  ++ IGNFDG+H GH  IL +A K++  + +   +L+F+P+
Sbjct: 1   MKILRN-KFNL---QYTKNSILVIGNFDGLHKGHISILNEAKKLSKKNNLKFGLLTFDPN 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P+         F +   + +EK+L K     LI  KF     N SA+ FI+K+L   +  
Sbjct: 57  PKEFFLKDK-YFKIMSNTEKEKLLSKNKLDFLIILKFNNSLRNKSADTFIKKILKSKISP 115

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G +F+FGK+R G   +L+            I   +      +SSS IR  +  G 
Sbjct: 116 SKIIVGKEFKFGKNRTGSPSLLKNYFN------TKIANQKKISGVKISSSQIRKLIQAGK 169

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +  A  LLG  +++  +V  G KIGR LG+ TAN+ ++  I    GVYA R   ++   Y
Sbjct: 170 ISKANRLLGRNWSVIGNVNSGNKIGRKLGYKTANLFINNCIQPYRGVYATRLYFKN-RLY 228

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           +G++NFG  PT+      +LE+ +F   + +Y ++  + FF ++R E KFK  + L   +
Sbjct: 229 NGISNFGIAPTLKLKKREVLETHLFSPVKNLYKKKVKIEFFKFIRKEKKFKTKKNLTDQI 288

Query: 299 GEDEKKARKILES 311
            +D   A+KIL +
Sbjct: 289 KKDITIAKKILNN 301


>gi|119390018|pdb|2I1L|A Chain A, Crystal Structure Of The C2 Form Of Fad Synthetase From
           Thermotoga Maritima
 gi|119390019|pdb|2I1L|B Chain B, Crystal Structure Of The C2 Form Of Fad Synthetase From
           Thermotoga Maritima
          Length = 293

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 17/295 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV+IG FDG+H+GH  +L    +IA        + + +  P        P   L     +
Sbjct: 2   VVSIGVFDGVHIGHQKVLRTXKEIAFFRKDDSLIYTISYPP-EYFLPDFP-GLLXTVESR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + L +   +  +   F     + + E F+++ L     V  V+ G  FRFGK+ +G+  
Sbjct: 60  VEXLSRY--ARTVVLDF-FRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNAS 113

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L+    K G     I+++   + + VSSS IR  + +G V      LG  F IE  V  
Sbjct: 114 FLR----KKGVEVYEIEDVVV-QGKRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHK 168

Query: 199 GEKIGRTLGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPL 256
             + GR LGFPTAN+    + L  LK GVY +R    D     GV N G  PT+     +
Sbjct: 169 DREFGRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVXNVGFRPTVGDARNV 228

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             E +I DF  ++YGQR  +    + R E KF  IE+LK  + +D K AR  ++ 
Sbjct: 229 KYEVYILDFEGDLYGQRLKLEVLKFXRDEKKFDSIEELKAAIDQDVKSARNXIDD 283


>gi|300871235|ref|YP_003786108.1| riboflavin biosynthesis protein [Brachyspira pilosicoli 95/1000]
 gi|300688936|gb|ADK31607.1| riboflavin biosynthesis protein [Brachyspira pilosicoli 95/1000]
          Length = 309

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 19/297 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG VV IG FDG+H GH  +++  + +A   N    V+                 ++   
Sbjct: 16  KGSVVTIGKFDGVHKGHQKLIKYTVNMAKKYNLLSVVMII----------RKKNVSIYNM 65

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
                 ++ +G + +I   F  E     A++F  ++ +E+ ++K ++ G  F FGKDR G
Sbjct: 66  EENISFIKALGVNYIIVIDFLPEFYTMEAKEFFNRL-IEYYKMKRIVIGEDFAFGKDRVG 124

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D   L++   + G +   ++   N+    VSSS IR  L+ G V N + +LG  +++   
Sbjct: 125 DIDFLKRYALEKGVNVNIVN-FLNHCGDKVSSSKIRDCLSNGEVDNVSKMLGRNYSMSGI 183

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPN 253
           +IHG  +GR +G+PTAN++L+  I + K GVY+   +  +    Y  +   G +     N
Sbjct: 184 IIHGNALGRKIGYPTANLELNDSIFVPKMGVYSSLVKIGNSAKLYKALTFIGIS---NIN 240

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             L +ES I DFS+ IYG++ TV F  Y+R  IK   IE++K  + +DE   RK  +
Sbjct: 241 KELRVESHILDFSKMIYGKKITVIFLKYIRDNIKVNSIEEVKSLLEKDEYNVRKYFK 297


>gi|283782789|ref|YP_003373543.1| riboflavin kinase [Gardnerella vaginalis 409-05]
 gi|297242934|ref|ZP_06926872.1| FAD synthase [Gardnerella vaginalis AMD]
 gi|283442117|gb|ADB14583.1| riboflavin kinase [Gardnerella vaginalis 409-05]
 gi|296889145|gb|EFH27879.1| FAD synthase [Gardnerella vaginalis AMD]
          Length = 414

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 157/412 (38%), Gaps = 103/412 (25%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M V       N  IN    +  +  VV IG FDG+H GH  ++ + + +A+       V+
Sbjct: 1   MKVIDIRPDANGMINWPTLSAERKAVVTIGVFDGMHKGHREVIRRTVDLAHRHGAFSVVI 60

Query: 54  SFNPHPRTIIQ---------------SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLE 98
            F+P P  +                    P   L+    + +++ ++    ++  +++L 
Sbjct: 61  MFDPRPSVVHANPDLYDDFGDVNSKLPDDPDA-LTSVRQRLRVMSQLDVDHVVIVRYSLA 119

Query: 99  TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL 157
            A  S   F+ ++ V  L ++ ++ G+    G  RAGD   +++  +  G F  + +++L
Sbjct: 120 FAAKSYRFFLGQL-VGKLGMRALVLGSDAALGARRAGDIKAIRELSQATGVFELIEVEDL 178

Query: 158 RNNKSQI-----------------------------------------VSSSNIRTALTK 176
             +  ++                                          SS+N+R  L  
Sbjct: 179 GPDDVRVPDPIVREVPQEPGDPKDPSEGMNKAEYRAWSKSMPNKKVRAWSSTNVRWMLAT 238

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD- 234
           G V  A  +L     +E  V+HG++ GR +GFPT N+       +  +GVYA      D 
Sbjct: 239 GRVKEAREILDQPHRVEGTVVHGDERGREIGFPTVNLGEKIEGYVPVDGVYAGWVVDLDA 298

Query: 235 ------------------------------QTSYSGVANFGRNPTMVPNG----PLLLES 260
                                            +    + G  PT   +G       +E+
Sbjct: 299 DNKNDVRPSKNAVPDVSVLRRDELHLGVHSPWRWPAAISIGTKPTFNKDGEEDAERTVEA 358

Query: 261 F-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           + +FD  +++YG R  + F  +LRP+  F  ++ LK  +  + ++ R+I ++
Sbjct: 359 YGLFDDWKDLYGHRVCIEFASFLRPQQAFDSVDALKDMLKANVEQVREITDA 410


>gi|332073472|gb|EGI83951.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA17570]
 gi|332201598|gb|EGJ15668.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA47368]
          Length = 252

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 11/259 (4%)

Query: 53  LSFNPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++FN  P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F   
Sbjct: 1   MTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFAT 60

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             ++ +  K ++ G  + FG D+      L+     +    + +  + + K + +SS+ I
Sbjct: 61  Y-IKAMNAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRI 114

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIR 229
           R A+  G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY + 
Sbjct: 115 RQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVD 174

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              Q +  Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF 
Sbjct: 175 VEIQ-RQKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFD 232

Query: 290 DIEKLKIYMGEDEKKARKI 308
            +++L   +  DE+  R  
Sbjct: 233 SVDQLVEQLKADEEVTRNW 251


>gi|160903128|ref|YP_001568709.1| riboflavin biosynthesis protein RibF [Petrotoga mobilis SJ95]
 gi|160360772|gb|ABX32386.1| riboflavin biosynthesis protein RibF [Petrotoga mobilis SJ95]
          Length = 296

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 89/300 (29%), Positives = 150/300 (50%), Gaps = 14/300 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            + IG FDG+H GH  IL+  +++ANN      VL F   P   +        + P   +
Sbjct: 3   ALTIGIFDGVHKGHQYILKNTLQLANNLRFEPLVLMFRYPPEKHLGGFEG--LILPSWRR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++I E +GF   +  K   E      EQ++++++ +   VK ++ G  F FGK+  G+  
Sbjct: 61  KQICEDIGFK--VEVKDLEEVWGLPHEQYLEELMKK--GVKAIVCGEDFTFGKNALGNVE 116

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            LQ   +  G     + +L++ +   VSSS I+  L  G++  A  +LG  +T+E  V  
Sbjct: 117 YLQAVSQSKGLVVKVLKDLKS-QGNRVSSSAIKRELKLGNIKTANGMLGRPWTLEGTVYE 175

Query: 199 GEKIGRTLGFPTANMQLSPD---ILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVP-N 253
              +G  LGFPTAN+ +      +L K GVY ++   + ++ +  G+ N G  PT     
Sbjct: 176 DRHVGFKLGFPTANINVWEKEEILLPKFGVYIVKGYVRGRSGFLWGLMNVGLRPTFDEYK 235

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
               +E +  DF  ++YG    +   D+LR E+KF + ++L   M +DE +ARKI++  Y
Sbjct: 236 KTPKVEVYFLDFFGDLYGDYIVLEVIDFLRDEVKFDNEQELIGAMEKDEDQARKIIQKHY 295


>gi|225620023|ref|YP_002721280.1| riboflavin biosynthesis protein RibF [Brachyspira hyodysenteriae
           WA1]
 gi|225214842|gb|ACN83576.1| riboflavin biosynthesis protein RibF [Brachyspira hyodysenteriae
           WA1]
          Length = 311

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 156/295 (52%), Gaps = 15/295 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  +V IG FD +H GH  +++  ++ AN + +  +        +I+  +   ++     
Sbjct: 15  KDSIVTIGKFDSVHKGHQKLIKYTVEYANKNNLISI------AIVIKKKN--VSIYNTED 66

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              +++ MG + +I   F  E     A++F  K+ +E+  +K +  G  F FGKDR GD 
Sbjct: 67  NNALIKSMGINYIIVIDFLPEFYTMEAKEFFDKL-IEYYRMKHIAVGNDFAFGKDRMGDS 125

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+K  ++ G    FI+   N K   +SSSNIR AL+ G +++   +LG  +++   V+
Sbjct: 126 EFLKKYSKECGIGVSFIN-FLNYKKDKISSSNIREALSNGDMVSVNKMLGREYSMSGLVV 184

Query: 198 HGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGP 255
           HG  +GR +G+PTAN+++  +I + K GVY+   +  +  T Y  +   G +     N  
Sbjct: 185 HGNALGRKIGYPTANLEIPKNIFIPKMGVYSSTVQIGNSDTIYKALTFIGIS---NINKE 241

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           L +ES I DFS+ IYG++ T+    Y+R  IK   I+++K  +  DEKK RK  +
Sbjct: 242 LRVESHILDFSKMIYGKKITIVLLKYIRDNIKVNSIDEVKKLLENDEKKIRKYFK 296


>gi|310287986|ref|YP_003939245.1| riboflavin kinase [Bifidobacterium bifidum S17]
 gi|309251923|gb|ADO53671.1| riboflavin kinase [Bifidobacterium bifidum S17]
          Length = 419

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 151/397 (38%), Gaps = 104/397 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSP------- 68
           +  VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +   ++        
Sbjct: 23  RKSVVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPG 82

Query: 69  -----IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                   L+    + + LE +G   ++  ++TL  A  S   F+ ++ V  L ++T++ 
Sbjct: 83  DGFRDPMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQM-VGKLGMRTLVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE-------------------------- 156
           GT    G +RAGD   +    +  G F    +D+                          
Sbjct: 142 GTDAAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDP 201

Query: 157 ---------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                           +  + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+
Sbjct: 202 TEGMTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEE 261

Query: 202 IGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD-------------------------- 234
            GRT+GFPTAN+  +    +  +GVYA                                 
Sbjct: 262 RGRTIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGATADSDENASDGNSGSGNASVIP 321

Query: 235 ----------------QTSYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRC 274
                              +    + G  PT          ++E++   D   ++YG   
Sbjct: 322 RVYDSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDV 381

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            V F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 382 RVEFAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|327389332|gb|EGE87677.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA04375]
 gi|332202967|gb|EGJ17035.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           GA47901]
          Length = 252

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 11/259 (4%)

Query: 53  LSFNPHPRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++FN  P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F   
Sbjct: 1   MTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFAT 60

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             ++ +  K ++ G  + FG D+      L+     +    + +  + + K + +SS+ I
Sbjct: 61  Y-IKAMNAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRI 114

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIR 229
           R A+  G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY + 
Sbjct: 115 RQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVD 174

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
              Q +  Y  +A+ G+N T         E  IFDF+Q+IYG+   V + D +R   KF 
Sbjct: 175 VEIQ-RQKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFD 232

Query: 290 DIEKLKIYMGEDEKKARKI 308
            +++L   +  DE+  R  
Sbjct: 233 SVDQLVDQLKADEEVTRNW 251


>gi|306820443|ref|ZP_07454079.1| riboflavin biosynthesis protein RibF [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551518|gb|EFM39473.1| riboflavin biosynthesis protein RibF [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 310

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 91/314 (28%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M ++ N E+ +          + IG+FDG+H GH  ++++ I++A N       L+F  +
Sbjct: 5   MKIYENFEVEKKYKRS-----ITIGDFDGLHKGHMPLIKKTIEMAKNKGYVSCALTFRFN 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              +  S++ +  L     + ++ +K G   L   +F  E  N +   FI K+LV+ L V
Sbjct: 60  TANL--SNNKVKYLCDIDEKIELFKKSGIEELFIIEFCNEIKNTNVYDFISKILVDKLNV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G   + G DR  D   +++  +        I +++ +  + V+SS+IR+ +  G 
Sbjct: 118 KYLLLGDDAKLGSDRL-DIHGIEEVCKICNVDFYSISQIQIDNIR-VTSSHIRSLIADGV 175

Query: 179 VLN-AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT 236
           V       LG  +    +V+HG  +G  LGFPTAN+ L+   +L K GVY      +   
Sbjct: 176 VDENLTKFLGRDYCFSGEVVHGNGLGVKLGFPTANIMLNSSLVLPKFGVYYAICEIEG-K 234

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y    N G  PT+  N  L LE+FIFDF+++IYG++  +    ++R E KFK++++L  
Sbjct: 235 RYDCAINIGDKPTV-DNNYLGLEAFIFDFNEDIYGKKIKIYLKKFIRKEEKFKNLDELIN 293

Query: 297 YMGEDEKKARKILE 310
            M +D +  RK+++
Sbjct: 294 QMKKDVEDIRKLMK 307


>gi|154486786|ref|ZP_02028193.1| hypothetical protein BIFADO_00612 [Bifidobacterium adolescentis
           L2-32]
 gi|154084649|gb|EDN83694.1| hypothetical protein BIFADO_00612 [Bifidobacterium adolescentis
           L2-32]
          Length = 409

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 78/389 (20%), Positives = 154/389 (39%), Gaps = 96/389 (24%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ------SS 66
           ++ K  VV IG+FDG+H GH  ++ +  ++A        V+ F+P P  +          
Sbjct: 20  SNDKKSVVTIGSFDGMHQGHQAVIRRVAELAEQEQAFSVVVLFDPRPALVHAYAAKHDGQ 79

Query: 67  SPIF------TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            P         L+    + + ++ +G    +  ++T+  +  S   F+ ++ V  L ++T
Sbjct: 80  EPPAGTPDTQALTSVDERLRAIDAIGVDYTLIVRYTMAFSAKSYRFFLGQM-VGKLGMRT 138

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL---------------------- 157
           ++ G+    G +RAG+   ++      G F    +D+                       
Sbjct: 139 LVLGSDAAMGANRAGNVKAIENLALATGVFQLEVVDDFGPGLTRVPVNAKPVMPSEPGEP 198

Query: 158 -------------------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                              +  + +  SS+N+R  L++G + +A  +LG+   +E  V+H
Sbjct: 199 SDPLEGASKAERRAWSKKHQAKEVRTWSSTNVRYLLSQGRIKDADAILGHAHAVEGTVVH 258

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD----------------------- 234
           GE+ GRT+GFPTAN+ +     L  +GVYA                              
Sbjct: 259 GEERGRTIGFPTANLSENVAGYLPVDGVYAGWLVDLGEKSADGGEEAGEKPADGVSQQYD 318

Query: 235 ------------QTSYSGVANFGRNPTMVPNG--PLLLESFIF-DFSQEIYGQRCTVSFF 279
                          +    + G  PT   +G    ++E++   D   ++YG +  V F 
Sbjct: 319 ASSVNARVAMQSPHRWPAAISIGTKPTFNEDGDAERVVEAYAITDDWLDLYGHQARVEFA 378

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +LRP+IKF   + L + +  + ++ +++
Sbjct: 379 GFLRPQIKFDSADDLVVELKRNVEETKRL 407


>gi|139436985|ref|ZP_01771145.1| Hypothetical protein COLAER_00119 [Collinsella aerofaciens ATCC
           25986]
 gi|133776632|gb|EBA40452.1| Hypothetical protein COLAER_00119 [Collinsella aerofaciens ATCC
           25986]
          Length = 335

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 84/309 (27%), Positives = 145/309 (46%), Gaps = 9/309 (2%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPIFTL 72
            HL    +AIG FDG+H GH  ++   ++   A+     V++F+P P  ++ SSSP   L
Sbjct: 32  EHLGAASIAIGVFDGVHRGHQELIAALVRDARAHGCKAVVVTFDPDPDVVV-SSSPAQKL 90

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              + +   L + G   ++   FT E A      F+  +    ++++++  G+ FR G+ 
Sbjct: 91  MTTADRLHALAQTGVDVVVAVPFTPEVAVLDHVGFLALLS-RVVDIRSIRVGSDFRLGRG 149

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
            A     ++  G  +G      D L     + + ++ IR  L +GHV  AA LLG  + +
Sbjct: 150 GASGVAEMRAWGAVHGVDVYGHD-LLCEGGEAICATRIRHELGQGHVELAAELLGRPYMV 208

Query: 193 ESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
              VI G   G  +GFPTAN+Q+   I +  +GVY       D T +    N G  PT  
Sbjct: 209 RGGVIRGRHEGSGMGFPTANLQVPDGIQVPADGVYEGLVLVDD-TVWPAAVNVGLPPTYA 267

Query: 252 PNGPLL-LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +     LE+ +  ++ ++YG   +++F  +LRP   F  +++L   +  + +  R  L 
Sbjct: 268 DDAASAHLEANLIGYTGDLYGSSVSLAFTRWLRPSRLFDSLDELIATVEGNIEDIRHNLG 327

Query: 311 SSYPLSERD 319
               +S RD
Sbjct: 328 E-QGVSIRD 335


>gi|261338242|ref|ZP_05966126.1| protein RibF [Bifidobacterium gallicum DSM 20093]
 gi|270276895|gb|EFA22749.1| protein RibF [Bifidobacterium gallicum DSM 20093]
          Length = 404

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 89/403 (22%), Positives = 159/403 (39%), Gaps = 91/403 (22%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVL 53
           M +F      +  +   L +  +  VV +G FDG+H GH  ++E+ ++IA+   +   V+
Sbjct: 1   MKIFRLNPQADGTVEWPLLDRERKSVVTVGVFDGLHRGHQAVVERVVQIAHKLDLFSVVI 60

Query: 54  SFNPHPRTIIQSSSPIF------------TLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +   +                 L+    + ++L+++G    I   +T+  + 
Sbjct: 61  MFDPRPGFVHAYAKQHDGADVPDTLRDANLLTDVDRRLQLLQQLGVDVAIVVHYTMAFSR 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE---- 156
            S   F+  + V  L ++T++ G     G +R G    ++   +  G F    +D+    
Sbjct: 121 VSYLTFLGNL-VGKLGMRTLVLGEDAALGAERKGTVERIRTIADGTGMFELDVVDDRGPG 179

Query: 157 ---------------------------------------LRNNKSQIVSSSNIRTALTKG 177
                                                  L+    + +SS+NIR  L  G
Sbjct: 180 KTRVPPKLTGLEAQVLEGQQPSDPRKTMTKAQMRAWSKKLQAKLVRELSSTNIRYLLNLG 239

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD-- 234
            + +A  LLG    +E  V+HGE+ GRTLGFPTAN+       L  +GVYA         
Sbjct: 240 VIEDANALLGRAHAVEGVVVHGEERGRTLGFPTANVGAPVDGYLPADGVYAGWLVDLGPA 299

Query: 235 --------------------QTSYSGVANFGRNPT---MVPNGPLLLESFIF-DFSQEIY 270
                                  ++   + G  PT   +      +LE+    D   ++Y
Sbjct: 300 DQSAATDQMQEQETMEGEQEHGRWAADISIGTKPTYSELTGLHERVLEANAITDDWLDLY 359

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           G R  V F  +LRP+IKF+  + LK  +  + ++A +I ++  
Sbjct: 360 GHRVRVEFVQFLRPQIKFESSDALKAELERNAEQAWEICQAQQ 402


>gi|224283747|ref|ZP_03647069.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140903|ref|ZP_07803096.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133413|gb|EFR51030.1| riboflavin kinase [Bifidobacterium bifidum NCIMB 41171]
          Length = 419

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 151/397 (38%), Gaps = 104/397 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPI------ 69
           +  VV +G FDG+H GH  ++ +A+++A        V+ F+P P  +   ++        
Sbjct: 23  RKSVVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVVMFDPRPGVVHAYAAAHDGQEPG 82

Query: 70  ------FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
                   L+    + + LE +G   ++  ++TL  A  S   F+ ++ V  L ++T++ 
Sbjct: 83  DGFRDSMALTSVDQRLRTLENLGVDHVLIVRYTLAFATKSYRFFLGQM-VGKLGMRTLVL 141

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDE-------------------------- 156
           GT    G +RAGD   +    +  G F    +D+                          
Sbjct: 142 GTDAAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGHVRVPADVTPQMPSEPGEPVDP 201

Query: 157 ---------------LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                           +  + ++ SS+N+R  L  G +  A  +LG+   IE  V+HGE+
Sbjct: 202 TEGMTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIKAADEILGHAHAIEGTVVHGEE 261

Query: 202 IGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD-------------------------- 234
            GRT+GFPTAN+  +    +  +GVYA                                 
Sbjct: 262 RGRTIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGATAGSDENASDDNSGSGNASVIP 321

Query: 235 ----------------QTSYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRC 274
                              +    + G  PT          ++E++   D   ++YG   
Sbjct: 322 RVYDSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLNERVVEAYAVTDEWLDLYGHDV 381

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            V F  +LRP++KF   + LK  +  + ++ R++  +
Sbjct: 382 RVEFAGFLRPQVKFDSADALKDELTRNVQETRELTSA 418


>gi|301300269|ref|ZP_07206478.1| riboflavin biosynthesis protein RibF [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852110|gb|EFK79785.1| riboflavin biosynthesis protein RibF [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 264

 Score =  231 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 7/261 (2%)

Query: 53  LSFNPHPRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           ++F+ HP+ I Q+        L+    + +  + +G       KF    A  S + FI K
Sbjct: 1   MTFDRHPKIIFQNIDGEKFKYLTMLDEKLEHFKNLGVDIAYVVKFDENLAYLSPQDFIDK 60

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            +V  L    V+ G  + +GK    +   +    +   F  + +D L+ N  Q +SS+ I
Sbjct: 61  YVV-GLHAICVVAGQDYTYGKHDIANMDTISDFAKGR-FEIITVDHLQRND-QKISSTQI 117

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIR 229
           R  L  G+V  A  LLGY++     V HG K GR +GFPT N+ +   + +L EGVYA++
Sbjct: 118 RKDLDSGNVEAANLLLGYQYENHGTVEHGFKRGRKIGFPTLNVSIPKNERILGEGVYAVK 177

Query: 230 FRTQ-DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
            +   D   Y G+A+ G N T   +    +E  +F+F + +YG++  V ++ +LR  +KF
Sbjct: 178 VKIDKDNLWYEGMASIGHNETFGDDLEKTVEINLFNFDKSVYGEKVIVKWYKFLREMVKF 237

Query: 289 KDIEKLKIYMGEDEKKARKIL 309
             +E+L   + +D++      
Sbjct: 238 DSVEELIDQLNKDKRDTEVFF 258


>gi|302425311|gb|ADL39577.1| putative riboflavin biosynthesis protein RibF [Hyphomicrobium
           sulfonivorans]
          Length = 313

 Score =  231 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 91/298 (30%), Positives = 146/298 (48%), Gaps = 12/298 (4%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           HL GG V + +FDG H GH  ++  A +++  + SP+  L F+        S      L+
Sbjct: 26  HLLGGHVVVSSFDGFHRGHQALMHHAKQVSAADGSPVVALLFD------AASDDARTPLA 79

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
                 + L   G + ++   F    A++   Q + ++L E+   K++  G  FRFG   
Sbjct: 80  QGEEVARRLRLQGGANVVALGF-ASNASWLECQALCELLREF-APKSITVGANFRFGPKS 137

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           +    +L      +   T  ++ +   +   ++++NIR  L  G +  A  LLG  +TIE
Sbjct: 138 SIGSQVLASMARSFAISTTVMETVACEECGPITAANIRQHLAAGDIQAANRLLGRNWTIE 197

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+HG K GR LGFPTAN+Q    + L   +YA+R     +    GVA +G  P    +
Sbjct: 198 GPVVHGYKRGRELGFPTANVQPLHRLDLAHAIYAVRVY-AGERVLDGVACYGTRPQF-DD 255

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           G   LE  I DF+ ++YGQR  V F  + RPE+KF  ++ L   M  D  +AR++L +
Sbjct: 256 GAPALEVHILDFAGDLYGQRLRVEFVAHQRPELKFSCVDDLVRQMEIDRAEARELLAA 313


>gi|119025375|ref|YP_909220.1| riboflavin kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764959|dbj|BAF39138.1| riboflavin kinase [Bifidobacterium adolescentis ATCC 15703]
          Length = 409

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 79/389 (20%), Positives = 155/389 (39%), Gaps = 96/389 (24%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQ------SS 66
           ++ K  VV IG+FDG+H GH  ++ +  ++A        V+ F+P P  +          
Sbjct: 20  SNDKKSVVTIGSFDGMHQGHQAVVRRVAELAEQEQAFSVVVLFDPRPALVHAYAAKHDGQ 79

Query: 67  SPIF------TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            P         L+  + + + ++ +G    +  ++T+  A  S   F+ ++ V  L ++T
Sbjct: 80  EPPAGTPDTQALTSVNERLRAIDAIGVDYTLIVRYTMAFAAKSYRFFLGQM-VGKLGMRT 138

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDEL---------------------- 157
           ++ G+    G +RAG+   ++      G F    +D+                       
Sbjct: 139 LVLGSDAAMGANRAGNVKAIENLALATGVFQLEVVDDFGPGLTRVPVNAKPVMPSEPGEP 198

Query: 158 -------------------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                              +  + +  SS+N+R  L++G + +A  +LG+   +E  V+H
Sbjct: 199 SDPLEGASKAERRAWSKKHQAKEVRTWSSTNVRYLLSQGRIKDADAILGHAHAVEGTVVH 258

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD----------------------- 234
           GE+ GRT+GFPTAN+ +     L  +GVYA                              
Sbjct: 259 GEERGRTIGFPTANLSENVAGYLPVDGVYAGWLVDLGEKSADGGEEAGEKPADGVSQQYD 318

Query: 235 ------------QTSYSGVANFGRNPTMVPNG--PLLLESFIF-DFSQEIYGQRCTVSFF 279
                          +    + G  PT   +G    ++E++   D   ++YG +  V F 
Sbjct: 319 ASSVNARVDMQSPHRWPAAISIGTKPTFNEDGDAERVVEAYAITDDWLDLYGHQARVEFA 378

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +LRP+IKF   + L + +  + ++ +++
Sbjct: 379 GFLRPQIKFDSADDLVVELKRNVEETKRL 407


>gi|307708007|ref|ZP_07644479.1| riboflavin biosynthesis protein RibF [Streptococcus mitis NCTC
           12261]
 gi|307615944|gb|EFN95145.1| riboflavin biosynthesis protein RibF [Streptococcus mitis NCTC
           12261]
          Length = 275

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 14/278 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +AE+F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSKFASLTAEEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G  + FG D+      L+     +    + +  + + K + +SS+ IR A+  
Sbjct: 119 NAKIIVAGFDYTFGSDKK-TAEDLKDY---FDGEVIIVPPVEDEKGK-ISSTRIRQAILD 173

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQ 235
           G+V  A  LLG        V+HG   GRT+G+PTAN+  L    +  +GVY +    Q +
Sbjct: 174 GNVKEAGELLGAPLPSRGMVVHGNARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-R 232

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR 273
             Y  +A+ G+N T         E  IFDF+Q+IYG+ 
Sbjct: 233 QKYRAMASVGKNVTF-DGEEARFEVNIFDFNQDIYGET 269


>gi|255524224|ref|ZP_05391183.1| FAD synthetase [Clostridium carboxidivorans P7]
 gi|255512049|gb|EET88330.1| FAD synthetase [Clostridium carboxidivorans P7]
          Length = 277

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 8/261 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
              +A+G+FDGIH+GH  ++ + IK+A    +   + +F  HP ++I        +   S
Sbjct: 15  NTYIALGSFDGIHIGHVSLVNKTIKLARKNQAKSMIFTFKNHPLSVINKEIAPKIIMDNS 74

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++LE  G  A+    F  E    S E FI  + V     K ++ G   RFG    GD
Sbjct: 75  NKIEVLESFGLDAINMANFDKELMMLSPEDFILNL-VSHYRAKGIVVGFNNRFGYKNLGD 133

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL-TKGHVLNAAHLLGYRFTIESD 195
             +L+K  +KY F    +D ++  K+Q+VSSS IR  +  +G +   + +L   F ++ +
Sbjct: 134 VELLKKLSKKYSFDLCVVDPVKY-KAQVVSSSVIRNVISDEGDMKKVSKMLTRPFMLQGN 192

Query: 196 VIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
           V+ G+++GRTLGFPT N+      +L + GVY    + +D   + G+ N G NPT+  N 
Sbjct: 193 VVKGKQLGRTLGFPTVNLNYDKRFVLPRGGVYYTVVKYED-KFFRGITNVGYNPTVEDN- 250

Query: 255 PLLLESFIFDFSQEIYGQRCT 275
            L +E+ I DFS+ IY +   
Sbjct: 251 KLSVETHILDFSENIYNKHIK 271


>gi|167772651|ref|ZP_02444704.1| hypothetical protein ANACOL_04032 [Anaerotruncus colihominis DSM
           17241]
 gi|167665129|gb|EDS09259.1| hypothetical protein ANACOL_04032 [Anaerotruncus colihominis DSM
           17241]
          Length = 313

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 88/310 (28%), Positives = 139/310 (44%), Gaps = 17/310 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNP- 57
           M VFH I    +            G FDG+H+GH  ++ +A++ A    +   V +F   
Sbjct: 1   MEVFHTIAQAAAGAPAAVAC----GYFDGLHIGHAAVVGRAVQRAKEEGLCAGVFTFTRA 56

Query: 58  --HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
              P       +    +   + +  IL+  G   ++   F+ E  N   E+F  +VLV  
Sbjct: 57  GGSPER----KTGAGEIVTEADKYAILDAWGVQRVLAPDFS-EFHNLEPEEFFDEVLVRR 111

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +  + V  G  FRFG+  AG   +L+K     G     + E+       VSS+ IR  L 
Sbjct: 112 MGARVVCCGADFRFGRAAAGGAALLEKLCASRGVALEIVPEVLC-GGVRVSSTRIRELLA 170

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQD 234
            G V  A  LLG  F     V+HG+++GRT+  PT N +     + L+ GVYA      D
Sbjct: 171 AGDVKEAGRLLGRAFGYRLTVVHGKRLGRTIDSPTINQRFPKSFVRLRHGVYAA-AAVVD 229

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                 VAN G  PT+     +  E++I  FS ++YG++  V   ++LR E KF  ++ L
Sbjct: 230 GALLPAVANIGLRPTVEQTDAVNSETYIIGFSGDLYGRQIEVRLLEFLRDEQKFASVDAL 289

Query: 295 KIYMGEDEKK 304
           +  +  D + 
Sbjct: 290 RARIQADARA 299


>gi|225351006|ref|ZP_03742029.1| hypothetical protein BIFPSEUDO_02587 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158462|gb|EEG71704.1| hypothetical protein BIFPSEUDO_02587 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 409

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/388 (20%), Positives = 149/388 (38%), Gaps = 95/388 (24%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII------QSS 66
           ++ K  VV IG+FDG+H GH  ++ + +++A        V+ F+P P  +          
Sbjct: 21  SNDKKSVVTIGSFDGMHQGHQAVIRRVVELAKKEQSFSVVVLFDPRPALVHGYAAKNGGQ 80

Query: 67  SPIF------TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            P         L+    + + ++K+G    +   +TL  A  S   F+ ++ V  L ++T
Sbjct: 81  EPPADMVDTQALTSMQERLRAIDKLGVDYTLIVHYTLAFAAKSYRFFLGQM-VGKLGMRT 139

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKS----------------- 162
           +  G+    G +RAGD   ++      G F    +D+    ++                 
Sbjct: 140 LALGSDAAMGANRAGDVKAIENLALATGVFQLEVVDDRGPGETRVPANAQPVMPTGHGEP 199

Query: 163 ------------------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                                   ++ SS+N+R  L +G + +A  +LG+   +E  V+H
Sbjct: 200 TDPLEGASKAERRAWSKKNQAKPVRVWSSTNVRYLLGQGRIKDADAILGHPHAVEGIVVH 259

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQT--------------------- 236
           GE+ GRT+GFPTAN+       L  +GVYA                              
Sbjct: 260 GEERGRTIGFPTANLSDNVAGYLPVDGVYAGWLVDLGSKTAESDHAEAASDGISQQFDSS 319

Query: 237 ------------SYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFD 280
                        +    + G  PT          ++E++   D   ++Y  +  V F  
Sbjct: 320 SVDARLADHSPYRWPAAISIGTKPTFNEATGMNDRVVEAYAITDDWLDLYDHQVRVEFTG 379

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +LRP+IKF   + L   +  + ++ ++I
Sbjct: 380 FLRPQIKFDSAQDLIDELKRNVEETKRI 407


>gi|258615960|ref|ZP_05713730.1| riboflavin biosynthesis protein RibF [Enterococcus faecium DO]
          Length = 235

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 5/239 (2%)

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            S +E+ +  +G   L    FT   A+ + ++F+ + +V  L  K  ++G  + +G    
Sbjct: 1   LSKKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIV-GLHAKYAVSGFDYTYGPKDI 59

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            D     +  +   F  V + +    + + +SS+ IR  L  G V  AA LLG  + +E 
Sbjct: 60  ADVAHFPEYAKGR-FKIVTVSK-EEEQGEKISSTRIRGLLDSGQVKEAAKLLGCTYEVEG 117

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V+HG+  GR LGFPTAN+++   + L KEGVY    +   +T Y  + + G N T    
Sbjct: 118 VVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKI-GETWYPAMGSIGHNDTFGEG 176

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
             L +E +I DF+Q+IYG+   V +  +LR ++KF  +E+L   + EDE+   +     
Sbjct: 177 RELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQATAEYFSQQ 235


>gi|212716575|ref|ZP_03324703.1| hypothetical protein BIFCAT_01503 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660279|gb|EEB20854.1| hypothetical protein BIFCAT_01503 [Bifidobacterium catenulatum DSM
           16992]
          Length = 409

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 81/388 (20%), Positives = 149/388 (38%), Gaps = 95/388 (24%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII------QSS 66
           ++ K  VV IG+FDG+H GH  ++ + +++A        V+ F+P P  +          
Sbjct: 21  SNDKKSVVTIGSFDGMHQGHQAVIRRVVELAKKEQSFSVVVLFDPRPALVHGYAAKNGGQ 80

Query: 67  SPIF------TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            P         L+    + + ++K+G    +   +TL  A  S   F+ ++ V  L ++T
Sbjct: 81  EPPADMVDTQALTSMQERLRAIDKLGVDYTLIVHYTLAFAAKSYRFFLGQM-VGKLGMRT 139

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKS----------------- 162
           +  G+    G +RAGD   ++      G F    +D+    ++                 
Sbjct: 140 LTLGSDAAMGANRAGDVKAIENLALATGVFQLEVVDDRGPGETRVPANAQPVMPTGHGEP 199

Query: 163 ------------------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                                   ++ SS+N+R  L +G + +A  +LG+   +E  V+H
Sbjct: 200 TDPLEGASKAERRAWSKKNQAKPVRVWSSTNVRYLLGQGRIKDADAILGHSHAVEGIVVH 259

Query: 199 GEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQT--------------------- 236
           GE+ GRT+GFPTAN+       L  +GVYA                              
Sbjct: 260 GEERGRTIGFPTANLSDNVAGYLPVDGVYAGWLVDLGSKTVESDHAGAASDGISQQFDSS 319

Query: 237 ------------SYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFD 280
                        +    + G  PT          ++E++   D   ++Y  +  V F  
Sbjct: 320 SVDARLADHSPYRWPAAISIGTKPTFNEATGMNDRVVEAYAITDDWLDLYDHQVRVEFTG 379

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           +LRP+IKF   + L   +  + ++ ++I
Sbjct: 380 FLRPQIKFDSAQDLIDELKRNVEETKRI 407


>gi|84393571|ref|ZP_00992324.1| hypothetical protein V12B01_08767 [Vibrio splendidus 12B01]
 gi|84375780|gb|EAP92674.1| hypothetical protein V12B01_08767 [Vibrio splendidus 12B01]
          Length = 201

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/198 (38%), Positives = 106/198 (53%), Gaps = 2/198 (1%)

Query: 112 LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           +V+ L VK ++ G  F FGK R G+  +L++ GEKYGF  V       N+ + VSS+ IR
Sbjct: 1   MVDKLGVKFLVVGDDFCFGKGRTGNFAMLKEAGEKYGFEVVSTQSYCLNQLR-VSSTEIR 59

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
            AL    +  +A +LG  ++I   V HG K+GRT+GFPTAN+ L   +    GVY +   
Sbjct: 60  NALAVDDLAASATMLGRDYSISGRVSHGRKLGRTIGFPTANIPLKRCVSPVSGVYVVEAL 119

Query: 232 TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
             D     GVAN G+ PT+       LE   FDF   +YG++  V     LR EIKF+  
Sbjct: 120 DIDGVPVGGVANIGQRPTVNGV-RQQLEVHFFDFKANLYGKQLEVRLLHKLRDEIKFESF 178

Query: 292 EKLKIYMGEDEKKARKIL 309
           + LK  +  D + AR  L
Sbjct: 179 DALKNQIELDAEAARVWL 196


>gi|330892729|gb|EGH25390.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 219

 Score =  226 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 6/223 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKIELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +  G  FRFG DR GD   LQ+ G  YGF       +  +    VSS+ +R AL    
Sbjct: 118 QHLEVGDDFRFGFDRVGDFDFLQQAGTTYGFTVEAAQTVEID-GIRVSSTKVRKALAASD 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
              A  +LG  F I   V+HG+K+ R LG PTAN+QL    + 
Sbjct: 177 FALAERMLGRPFQITGRVLHGQKLARQLGTPTANVQLKRRRVP 219


>gi|171741235|ref|ZP_02917042.1| hypothetical protein BIFDEN_00309 [Bifidobacterium dentium ATCC
           27678]
 gi|283455402|ref|YP_003359966.1| riboflavin kinase/FMN adenylyltransferase [Bifidobacterium dentium
           Bd1]
 gi|171276849|gb|EDT44510.1| hypothetical protein BIFDEN_00309 [Bifidobacterium dentium ATCC
           27678]
 gi|283102036|gb|ADB09142.1| ribF Riboflavin kinase/FMN adenylyltransferase [Bifidobacterium
           dentium Bd1]
          Length = 405

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/385 (20%), Positives = 149/385 (38%), Gaps = 92/385 (23%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPI--- 69
           ++ K  V+ IG+FDG+H GH  ++ + +++A        V+ F P P  +   ++     
Sbjct: 20  SNDKKSVLTIGSFDGMHQGHQAVIRRVVELARKERSFSVVVLFEPRPAMVHGYAAKHDGQ 79

Query: 70  ---------FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                      L+    + + +  +G    I   +TLE A  S   F+ ++ V  L ++ 
Sbjct: 80  EPPVGMLDTQALTSVDERLRSINALGVDYTIIVHYTLEFAAKSYRFFLGQM-VGKLGMRA 138

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKS----------------- 162
           ++ G     G +RAGD   ++      G F    +D+    ++                 
Sbjct: 139 LVLGADAALGANRAGDVKAIENLALATGVFQLDVVDDHGPGETRVPANAKPVMPADHGEP 198

Query: 163 ------------------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                                   ++ SS+N+R  L +G + +A  +LG+   +E  V+H
Sbjct: 199 ADPLEGATKAERRAWSKKHQAKAVRVWSSTNVRYLLGQGRIKDADAILGHMHAVEGTVVH 258

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT--------------------- 236
           GE+ GRT+GFPTAN+       L  +GVYA       +                      
Sbjct: 259 GEERGRTIGFPTANLSQDVFGYLPVDGVYAGWLVDLGKAGDEAGKPADGIATAYDSSSMD 318

Query: 237 ---------SYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLR 283
                     +    + G  PT          ++E++   D   ++YG +  V F  +LR
Sbjct: 319 ARLAPHSPYRWPAAISIGTKPTFNEATGMHERVVEAYAITDDWLDLYGHQVRVEFAGFLR 378

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKI 308
           P+I+F   + L   +  + ++ +++
Sbjct: 379 PQIRFASADDLAAELRRNVEETKRL 403


>gi|306823532|ref|ZP_07456907.1| possible FAD synthetase [Bifidobacterium dentium ATCC 27679]
 gi|309802973|ref|ZP_07697074.1| riboflavin kinase [Bifidobacterium dentium JCVIHMP022]
 gi|304553239|gb|EFM41151.1| possible FAD synthetase [Bifidobacterium dentium ATCC 27679]
 gi|308220440|gb|EFO76751.1| riboflavin kinase [Bifidobacterium dentium JCVIHMP022]
          Length = 405

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 78/385 (20%), Positives = 150/385 (38%), Gaps = 92/385 (23%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTIIQSSSPI--- 69
           ++ K  V+ IG+FDG+H GH  ++ + +++A        V+ F P P  +   ++     
Sbjct: 20  SNDKKSVLTIGSFDGMHQGHQAVIRRVVELARKERSFSVVVLFEPRPAMVHGYAAKHDGQ 79

Query: 70  ---------FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                      L+    + + +  +G    I  ++TLE A  S   F+ ++ V  L ++ 
Sbjct: 80  EPPVGMLDTQALTSVDERLRNINALGVDYTIIVRYTLEFAAKSYRFFLGQM-VGKLGMRA 138

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKS----------------- 162
           ++ G     G +RAGD   ++      G F    +D+    ++                 
Sbjct: 139 LVLGADAALGANRAGDVKAIENLALATGVFQLYVVDDHGPGETRVPANAKPVMPADHGEP 198

Query: 163 ------------------------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
                                   ++ SS+N+R  L +G + +A  +LG+   +E  V+H
Sbjct: 199 ADPLEGATKAERRAWSKKHQAKAVRVWSSTNVRYLLGQGRIKDADAILGHMHAVEGTVVH 258

Query: 199 GEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQDQT--------------------- 236
           GE+ GRT+GFPTAN+       L  +GVYA       +                      
Sbjct: 259 GEERGRTIGFPTANLSQDVFGYLPVDGVYAGWLVDLGKAGDEAGKPADGIATAYDSSSMD 318

Query: 237 ---------SYSGVANFGRNPTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLR 283
                     +    + G  PT          ++E++   D   ++YG +  V F  +LR
Sbjct: 319 ARLAPHSPYRWPAAISIGTKPTFNEATGMHERVVEAYAITDDWLDLYGHQVRVEFAGFLR 378

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKI 308
           P+I+F   + L   +  + ++ +++
Sbjct: 379 PQIRFASADDLAAELRRNVEETKRL 403


>gi|189485242|ref|YP_001956183.1| riboflavin biosynthesis protein RibF [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287201|dbj|BAG13722.1| riboflavin biosynthesis protein RibF [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 305

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 14/294 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           K  VVAIG FDG+H GH L++++ +     NN    ++      + +         L+  
Sbjct: 18  KKSVVAIGTFDGMHKGHRLLIDKILSSARKNNLRSVIIVLEKPVKKV------RGLLTTY 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + + ++  G   +       E  +   E+F  + L + L V  ++ G  F FGKD  G
Sbjct: 72  EEKIEKIKFSGADEIFVIGVPSEILSCCPEEFFDEFLHKMLNVSEIMCGIDFAFGKDGKG 131

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   L+K+ ++       +  L+N     +SSS IR  + K  V NAA LLG  ++    
Sbjct: 132 NIEWLKKKAKEKNIKINIVKPLKN-----ISSSYIRILIEKDDVKNAASLLGRNYSFTGI 186

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
               +  G+ LGFPT N+ ++ D LL +GVY      Q +  Y  + N G   T      
Sbjct: 187 PFKEKGEGKKLGFPTVNLHVNSDKLLPKGVYISLIS-QGERIYPSLTNIGIRSTFDRGNK 245

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           ++ E++I DF  E    +  V F   +R E KF  ++ LKI + +D   A +  
Sbjct: 246 IVPETYILDFKGEWKKLQTKVMFLKKIRNEKKFASVDALKIQISKDLLAALRFF 299


>gi|229818204|ref|ZP_04448486.1| hypothetical protein BIFANG_03501 [Bifidobacterium angulatum DSM
           20098]
 gi|229784455|gb|EEP20569.1| hypothetical protein BIFANG_03501 [Bifidobacterium angulatum DSM
           20098]
          Length = 390

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 145/365 (39%), Gaps = 75/365 (20%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQ-----SSSPIF 70
           +  V+ +G FDG+H GH  ++++ +++A   ++   V+ F+P P  +             
Sbjct: 23  RRVVITLGAFDGMHRGHQAVIDRVVELAKRHDAGSAVMLFDPRPAFVHAHGGNTPEVDAD 82

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            LS    +   +E+ G   +   +++L  A  S   F+ ++    L ++T++ G+    G
Sbjct: 83  ALSGVDERIAAMERAGIEQVYVVRYSLAFAEKSYIFFLGQLT-GKLGMRTLVLGSDAALG 141

Query: 131 KDRAGDRGILQKRGEKYG-FHTVFID-----ELRNNKSQI-------------------- 164
             R GD   +       G F    +D     E+R  ++ +                    
Sbjct: 142 AGRKGDVQAIANLAAATGVFELDVVDDRGPGEVRIPRNWMPQMPSKWGEPANPLEGATKA 201

Query: 165 ----------------VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGF 208
                            SSSN+R  L  G +  A  +LG+   +  +V+HGE+ GR++GF
Sbjct: 202 ERRAWSKKHQAKPVRTWSSSNVRYLLGNGRINEADAILGHLHAVTGEVVHGEERGRSIGF 261

Query: 209 PTANMQLS-PDILLKEGVYAIRFRTQDQ--------------------TSYSGVANFGRN 247
           PTAN+  S    L  +GVYA       +                      +    + G  
Sbjct: 262 PTANLGASITGYLPVDGVYAGWLVDLGKAPANAGLEDRVELVCNAVGAQRWPAAISIGTK 321

Query: 248 PTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           PT          ++E++   +   E+YG    V F  +LRP++KF   ++L   +  + +
Sbjct: 322 PTFSEATGRYERVVEAYCLSEDWLELYGHTVRVEFAGFLRPQVKFGSADELVAELKRNVQ 381

Query: 304 KARKI 308
             R+I
Sbjct: 382 TTREI 386


>gi|325295029|ref|YP_004281543.1| riboflavin biosynthesis protein RibF [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065477|gb|ADY73484.1| riboflavin biosynthesis protein RibF [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 276

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 19/289 (6%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +G F+  H GH  ++++A +  N     V         II        +     +E + E
Sbjct: 6   VGKFESFHKGHQSLIKEAKEKCNE----VF--------IISIKKWKDGIFSDKERELLAE 53

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           K     LI + F  E  + + E+F   + ++    + +  G  ++FGK RAG+    Q+ 
Sbjct: 54  KFKVK-LITFNF-EEIKDLTPEEFF--LKLKEAGCQKLFAGEDWKFGKGRAGNIFTAQEL 109

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
           G+K       +  ++    + + +S IR  L +G +  A  LLG+ +     V  G K+G
Sbjct: 110 GKKLEIEVKVL-PIKKFNGKKIGTSEIRKLLQEGKISEANKLLGFNYFCLGKVKEGNKLG 168

Query: 204 RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
           R +GFPT N++   ++L+  GVY +R    D   + G+AN G+ PT+   G  +LE  + 
Sbjct: 169 RKIGFPTLNIEPEKELLMPNGVYEVR-VIVDSKHFKGIANLGKRPTVSSAGKKVLEVHVP 227

Query: 264 DFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           D    E+YG+   + F  +LR E KF  IE+LK  +  D +  +++  S
Sbjct: 228 DILLPELYGKELKIEFLKFLRSEKKFSSIEELKTQIKLDVENLKRLWRS 276


>gi|319790168|ref|YP_004151801.1| riboflavin biosynthesis protein RibF [Thermovibrio ammonificans
           HB-1]
 gi|317114670|gb|ADU97160.1| riboflavin biosynthesis protein RibF [Thermovibrio ammonificans
           HB-1]
          Length = 292

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 21/295 (7%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +     +G F  +H GH  ++E+A K  ++  +          T+ +       L     
Sbjct: 10  QKSCCLVGKFSALHRGHRKLIEEAKKRCSDVKLV---------TVKRGEQ----LFSGEE 56

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E++L+++   ++    F       S E+F++ +  + +    ++ G ++RFGK R+G  
Sbjct: 57  REELLKELRVESV-ELPF-EHIKELSPEEFLKLL--KEMGCSVLVVGKEWRFGKGRSGTA 112

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              +K G K G   V ++ ++  +S+ +S+S I   L +G +  A  LLG+ +     V 
Sbjct: 113 ETAKKLGRKLGIEVVTVEPVKEGESK-ISTSEIVKLLREGSIEEANRLLGFNYFTVGTVE 171

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
            G+ +GR LGFPT N+++  ++ L  GVYA+    + +     VAN+G  PT+  +   +
Sbjct: 172 RGKGLGRRLGFPTLNVKVK-ELPLPYGVYAVNLVIEGRK-LPAVANYGVRPTVERDSKPV 229

Query: 258 LESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LE  +      ++YG+R  V F  +LRPE +F  +E+LK  +  D KK + +LE 
Sbjct: 230 LEVHVPKAHLPQLYGKRVRVEFLKFLRPEKRFSTVEELKNQIKLDLKKFQTVLEE 284


>gi|308233950|ref|ZP_07664687.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
 gi|328943962|ref|ZP_08241427.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
 gi|327491931|gb|EGF23705.1| riboflavin biosynthesis protein RibF [Atopobium vaginae DSM 15829]
          Length = 419

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 50/342 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPHPRTIIQSSSPI------- 69
              VA G FDG H+GH  +L + ++   A+N    V++F+P P +++ S +P        
Sbjct: 69  PSCVAFGVFDGFHVGHQRLLHKTLESAHAHNLTSAVVTFDPDPSSVLHSQAPASCALDLD 128

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             L     + +++ +     ++   FT   A    ++F+  V+++ L  + +  G  F+ 
Sbjct: 129 ACLLTTKQRLELIARTHVDLIVVVAFTPALAKLEYQKFLTDVVMKCLAPRIIHVGADFKM 188

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G    GD   L+  G  +         L  +   ++S++ IRT L  G +  A   L   
Sbjct: 189 GYRGQGDIAALRAFGSLHDIDVFG-HGLAVDNEVVISATLIRTLLQNGDIDLATRYLTRF 247

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
           +++   VIHG   G   GF TAN+   +   + + GVY      Q+   Y    N G +P
Sbjct: 248 YSLSGKVIHGRGKGSGFGFATANILCQANHCVPQPGVYMACVVCQNHI-YPAAVNVGISP 306

Query: 249 TMVPN--------------------------------------GPLLLESFIFDFSQEIY 270
           T                                              LE+ +  F+ +IY
Sbjct: 307 TFSSEIYENEQGKVQDNLQNNAQNGSQDNVEKTTHDSRRRLLSRQGFLEAHLLGFTGDIY 366

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           GQ   V F   +R   KF+ +  L   + ++ K+ +  L  +
Sbjct: 367 GQTVDVIFVKRMRDARKFESVSALIKVVHDNIKEVKNCLGET 408


>gi|294786526|ref|ZP_06751780.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens
           F0305]
 gi|294485359|gb|EFG32993.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens
           F0305]
          Length = 409

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/403 (21%), Positives = 149/403 (36%), Gaps = 96/403 (23%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M +F      + +++  L +  +  VV IG FDG+H GH  +L   +++A        V+
Sbjct: 1   MKIFKLSPDDHGKVDWPLLDAQRRSVVTIGTFDGVHKGHQAVLSTTVELARKHDSFSLVI 60

Query: 54  SFNPHPRTII---------QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
            F P P                     L+    +E+++ + G  AL   ++T E A  + 
Sbjct: 61  IFTPRPSFAHLAWKEGRTASEEEDRLALTSLRQREELIARQGVDALFEMEYTPEFAQTTY 120

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKSQ 163
             F+ ++ V  + ++T++ G   R GKDR+GD   ++   +  G F    +D+       
Sbjct: 121 TAFLGQL-VGKVGMRTLVLGEDARLGKDRSGDIKAIRNVAQAVGVFELEVVDDQGETAGT 179

Query: 164 IV------------------------------------------SSSNIRTALTKGHVLN 181
            V                                          SSS++R  L  G +  
Sbjct: 180 WVPGTVTYQAPQRKGEPANPLAGMSKAQKRAYTKKHHMRPVRDWSSSHVRDCLATGRIAE 239

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT---- 236
           A  +LG    +   V+HG+  GR LGFPTAN+    +  +  +GVYA             
Sbjct: 240 ARSVLGRDPQVAGVVVHGDARGRDLGFPTANVGGYREGFIPVDGVYAGYLLDYGFGDGSV 299

Query: 237 ---------------------------SYSGVANFGRNPTMVPNGP---LLLESFIFD-F 265
                                            + G N T    G      +E+++    
Sbjct: 300 SEGAASRQEDLSGHPYREFDGRDREPARLPAAISVGLNDTFHEAGEDVSRTIEAYVLGSH 359

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             ++YG R  V F  +LRP ++F   E+L   + EDE++  ++
Sbjct: 360 DLDLYGHRVAVDFAAFLRPMVRFDSAEELVDQLKEDERRTEEL 402


>gi|254473541|ref|ZP_05086937.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
 gi|211957253|gb|EEA92457.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
          Length = 221

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 2/210 (0%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPHP 59
           H F +I      P  L+GGVVAIGNFDG+H GH  +L+ A         P   ++F PHP
Sbjct: 9   HSFQHITDLAQFPEKLRGGVVAIGNFDGVHRGHRAVLDLARDEAAKRGVPALAMTFEPHP 68

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           RT  +   P+F L+P  I+ +ILE      +I   FT E A+ +AE F++ +LV+ L + 
Sbjct: 69  RTFFRPEQPVFRLTPSHIKAEILEAEHLDGVIELPFTKEFASMAAEDFVKDILVDRLGIS 128

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
             ITG  F FGK R G    L++ GE +GF    +    +   +++SSS IR AL +G +
Sbjct: 129 QSITGYDFHFGKGRQGTPEFLREAGEAHGFAVTIVGAEGDEGGEVISSSRIRAALGEGDL 188

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
             A  LLGYR+ +E+ V HGEK GR LG+ 
Sbjct: 189 AVANGLLGYRYFVEATVQHGEKRGRELGYR 218


>gi|308234861|ref|ZP_07665598.1| riboflavin kinase [Gardnerella vaginalis ATCC 14018]
          Length = 445

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/443 (19%), Positives = 162/443 (36%), Gaps = 133/443 (30%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVL 53
           M V +     N  IN    +  +  +V IG FDG+HLGH  ++E+ +     NN+   V+
Sbjct: 1   MKVINIRPDANGMINWPTLSAQRKAIVTIGVFDGMHLGHRKVIERTVDLARKNNAFSVVI 60

Query: 54  SFNPHPRTI---------IQSSSPIFT----LSPPSIQEKILEKMGFSALIRYKFTLETA 100
            F+P P  +            ++ I      L+    + ++L+++    +I  +++L  A
Sbjct: 61  MFDPRPSVVHENPDLFDDFGDNAQIPVDSQALTSVRQRLRVLQQLDVDHVIIVRYSLAFA 120

Query: 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRN 159
             S   F+ ++ V  L ++ ++ G+    G  RAG+   +++  +  G F  V +D+   
Sbjct: 121 AKSYRFFLGQL-VGKLGMRALVLGSDAALGARRAGNVHAIKELAQATGVFDLVVVDDFGP 179

Query: 160 NKSQI-----------------------------------------VSSSNIRTALTKGH 178
              ++                                          SS+N+R  L  G 
Sbjct: 180 GDVRVPDPIVPEVPSEDGEPKDPADGMNKAEYRAWSKGMPNKKVRAWSSTNVRWMLANGR 239

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD--- 234
           V +A  +LG    +E  V+HG + GR +GFPT N+ +     +  +GVYA      D   
Sbjct: 240 VRDARDVLGQPHRVEGIVVHGAERGREIGFPTVNLGERIDGYVPVDGVYAGWIVDLDADE 299

Query: 235 ----------------------------QTSYSGVANFGRNPTMVPNGP----------- 255
                                          ++   + G  PT   +             
Sbjct: 300 ASADNLHSSNIPSVGVLRKDELHLGVHSPWRWAAAISIGTKPTFAESNEGSSVKNVVSGD 359

Query: 256 --------------------------LLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKF 288
                                      ++E++   D  Q++YG R  + F  +LRP+  F
Sbjct: 360 SGDIFESDSISDFGADSSTYPNDSENRVVEAYALTDKWQDLYGHRICIEFAQFLRPQHAF 419

Query: 289 KDIEKLKIYMGEDEKKARKILES 311
             +E LK  +  D +K R+I ++
Sbjct: 420 DSVETLKDAVRHDVEKVREITDA 442


>gi|311114230|ref|YP_003985451.1| riboflavin kinase/FMN adenylyltransferase [Gardnerella vaginalis
           ATCC 14019]
 gi|310945724|gb|ADP38428.1| riboflavin kinase/FMN adenylyltransferase [Gardnerella vaginalis
           ATCC 14019]
          Length = 446

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/443 (19%), Positives = 162/443 (36%), Gaps = 133/443 (30%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVL 53
           M V +     N  IN    +  +  +V IG FDG+HLGH  ++E+ +     NN+   V+
Sbjct: 2   MKVINIRPDANGMINWPTLSAQRKAIVTIGVFDGMHLGHRKVIERTVDLARKNNAFSVVI 61

Query: 54  SFNPHPRTI---------IQSSSPIFT----LSPPSIQEKILEKMGFSALIRYKFTLETA 100
            F+P P  +            ++ I      L+    + ++L+++    +I  +++L  A
Sbjct: 62  MFDPRPSVVHENPDLFDDFGDNAQIPVDSQALTSVRQRLRVLQQLDVDHVIIVRYSLAFA 121

Query: 101 NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRN 159
             S   F+ ++ V  L ++ ++ G+    G  RAG+   +++  +  G F  V +D+   
Sbjct: 122 AKSYRFFLGQL-VGKLGMRALVLGSDAALGARRAGNVHAIKELAQATGVFDLVVVDDFGP 180

Query: 160 NKSQI-----------------------------------------VSSSNIRTALTKGH 178
              ++                                          SS+N+R  L  G 
Sbjct: 181 GDVRVPDPIVPEVPSEDGEPKDPADGMNKAEYRAWSKGMPNKKVRAWSSTNVRWMLANGR 240

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQD--- 234
           V +A  +LG    +E  V+HG + GR +GFPT N+ +     +  +GVYA      D   
Sbjct: 241 VRDARDVLGQPHRVEGIVVHGAERGREIGFPTVNLGERIDGYVPVDGVYAGWIVDLDADE 300

Query: 235 ----------------------------QTSYSGVANFGRNPTMVPNGP----------- 255
                                          ++   + G  PT   +             
Sbjct: 301 ASADNLHSSNIPSVGVLRKDELHLGVHSPWRWAAAISIGTKPTFAESNEGSSVKNVVSGD 360

Query: 256 --------------------------LLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKF 288
                                      ++E++   D  Q++YG R  + F  +LRP+  F
Sbjct: 361 SGDIFESDSISDFGADSSTYPNDSENRVVEAYALTDKWQDLYGHRICIEFAQFLRPQHAF 420

Query: 289 KDIEKLKIYMGEDEKKARKILES 311
             +E LK  +  D +K R+I ++
Sbjct: 421 DSVETLKDAVRHDVEKVREITDA 443


>gi|294790495|ref|ZP_06755653.1| riboflavin biosynthesis protein RibF [Scardovia inopinata F0304]
 gi|294458392|gb|EFG26745.1| riboflavin biosynthesis protein RibF [Scardovia inopinata F0304]
          Length = 393

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 151/371 (40%), Gaps = 69/371 (18%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQSS 66
           +   L +  K  VV IG+FDG+H GH  I+ +   +A        ++ F+P P  +    
Sbjct: 17  VEWPLLDKEKRSVVTIGSFDGVHKGHQAIISRVADLARQQGSFSVIIMFDPRPSYVHARE 76

Query: 67  SPI--------------FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
                              LS  S + + +E MG   LI   +TL  AN +   F+ ++ 
Sbjct: 77  KARIAGQGQDSTASRDDQALSSVSQRCEWIEGMGVDYLIIVTYTLPFANQTYVNFLGQL- 135

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNK---------- 161
           V  L ++T++ G   R G+  AGD   ++      G F    +D+               
Sbjct: 136 VGKLGMRTLVLGHDARLGRGLAGDMKAMKNLASATGVFEVESVDDQGQEDVWIPQKIVYE 195

Query: 162 -------------------------------SQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                                          ++  SSS +R AL+ G + +AA +L    
Sbjct: 196 VPQGHGEPADPLEGMTKSERRAWTKKHGMKRARRWSSSFVRYALSTGRMGDAASVLSRFP 255

Query: 191 TIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQD---QTSYSGVANFGR 246
            I   V+HGE+ GRTLG+PTAN+  L    +  +GVYA     QD           + G 
Sbjct: 256 QIRGLVVHGEQRGRTLGYPTANLGGLIEGFIPVDGVYAGFVTDQDDSNPHRIPAAISIGT 315

Query: 247 NPTMVP-----NGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
             T V      +   ++ES++ D    +IY     V F  Y+RP+++FKD + L   +  
Sbjct: 316 KETFVDEIGQEHLKRVVESYLVDQDGIDIYNHHIKVEFGLYMRPQVRFKDAQALVDQLKN 375

Query: 301 DEKKARKILES 311
           DEK+ R   ES
Sbjct: 376 DEKETRTWAES 386


>gi|315226103|ref|ZP_07867891.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens DSM
           10105]
 gi|315120235|gb|EFT83367.1| riboflavin biosynthesis protein RibF [Parascardovia denticolens DSM
           10105]
          Length = 417

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 84/391 (21%), Positives = 145/391 (37%), Gaps = 91/391 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPRTII-- 63
           +++  L +  +  VV IG FDG+H GH  +L   +++A        V+ F P P      
Sbjct: 21  KVDWPLLDAQRRSVVTIGTFDGVHKGHQAVLSTTVELARKHDSFSLVIIFTPRPSFAHLA 80

Query: 64  -------QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                          L+    +E+++ + G  AL   ++T E A  +   F+ ++ V  +
Sbjct: 81  WKEGRTASEEEDRLALTSLRQREELIARQGVDALFEMEYTPEFAQTTYTAFLGQL-VGKV 139

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFIDELRNNKSQIV---------- 165
            ++T++ G   R GKDR+GD   ++   +  G F    +D+        V          
Sbjct: 140 GMRTLVLGEDARLGKDRSGDIKAIRNVAQAVGVFELEVVDDQGETAGTWVPGTVTYQAPQ 199

Query: 166 --------------------------------SSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                                           SSS++R  L  G +  A  +LG    + 
Sbjct: 200 RKGEPANPLAGMSKAQKRAYTKKHHMRPVRDWSSSHVRDCLATGRIAEARSVLGRDPQVA 259

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQT---------------- 236
             V+HG+  GR LGFPTAN+    +  +  +GVYA                         
Sbjct: 260 GVVVHGDARGRDLGFPTANVGGYREGFIPVDGVYAGYLLDYGFGDGSVSEGAASRQEDLS 319

Query: 237 ---------------SYSGVANFGRNPTMVPNGP---LLLESFIFD-FSQEIYGQRCTVS 277
                                + G N T    G      +E+++      ++YG R  V 
Sbjct: 320 GHPYREFDGRDREPARLPAAISVGLNDTFHEAGEDVSRTIEAYVLGSHDLDLYGHRVAVD 379

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           F  +LRP ++F   E+L   + EDE++  ++
Sbjct: 380 FAAFLRPMVRFDSAEELVDQLKEDERRTEEL 410


>gi|226329207|ref|ZP_03804725.1| hypothetical protein PROPEN_03110 [Proteus penneri ATCC 35198]
 gi|225202393|gb|EEG84747.1| hypothetical protein PROPEN_03110 [Proteus penneri ATCC 35198]
          Length = 202

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 3/199 (1%)

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L VK +  G  FRFGK+R GD   LQ+ GE+YGF     +   + K   +SS+ +R A
Sbjct: 2   NKLGVKFLAIGDDFRFGKNREGDFHFLQQAGERYGFEVASTESYCD-KGLRISSTAVREA 60

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L    ++ A  LLG+ +++   V+HG ++GRT+GFPTAN+ +   +   +GVYA+     
Sbjct: 61  LLNDDLVLAESLLGHPYSVCGRVVHGNELGRTIGFPTANIPMKRLVAPVKGVYAVDVYLS 120

Query: 234 DQT-SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
           D      GVAN G  PT+   G + LE  + D + ++YG+R  V     LR E +F  ++
Sbjct: 121 DNQSPLPGVANIGSRPTVKGKG-VQLEVHLIDVNMDLYGRRIDVVLRKKLRNEQRFASLD 179

Query: 293 KLKIYMGEDEKKARKILES 311
            LK  + +D   AR  L  
Sbjct: 180 ALKQQIADDVATARDFLSQ 198


>gi|255321408|ref|ZP_05362568.1| riboflavin biosynthesis protein RibF [Campylobacter showae RM3277]
 gi|255301561|gb|EET80818.1| riboflavin biosynthesis protein RibF [Campylobacter showae RM3277]
          Length = 293

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             VAIG+FDG+H GH  +L+Q  +      + V+                  ++P   + 
Sbjct: 14  TAVAIGHFDGVHRGHKQLLKQLGEY---GGLVVI------------DKNKANITPKLKRA 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +            Y F         ++FI  +  ++  ++ ++ G  FRFG++RA D+  
Sbjct: 59  EYSS----YPCFLYDF-ESIKGLGGDEFIALLKRDFKNLQKIVVGFDFRFGRNRAWDKHD 113

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++    +    + +DE+       V SS IR  + +G +  A  LLG  ++IE  VI G
Sbjct: 114 LRRI---FDGEVIVVDEVC-FDGMGVHSSAIREYIKQGEIYKANRLLGREYSIEGRVIKG 169

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IG     PT N+ +   +L +EGVYA R R  D  +Y  V   G    +  +G   +E
Sbjct: 170 QGIGSRELVPTLNLDIKSYLLPREGVYATRTRI-DYKTYGSVTFIGNR--VSTDGNFSVE 226

Query: 260 SFIFDFSQEIYGQ-RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           + + +  + I G     V F   LR   KF+ + +LK  +G D K+A + 
Sbjct: 227 THVLN--ENIEGASDVAVCFIKRLRDNRKFESLGELKEQIGTDIKQAMEF 274


>gi|118475078|ref|YP_892268.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118414304|gb|ABK82724.1| riboflavin biosynthesis protein RibF [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 293

 Score =  218 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 28/302 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +AIG+FDGIH GH  ++++      N  + V+             S    ++P   +E+
Sbjct: 14  AIAIGHFDGIHKGHKELIKKL---GKNGALVVV------------ESDKACITPGDRREE 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                G      +    +      ++F++ +  E+  +K ++ G  F+FGKDRA D+  L
Sbjct: 59  Y---SGVPCFYYH--LKDIVELRGDEFLKLLQNEFPNLKRIVVGYDFKFGKDRAWDKHDL 113

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +     +    + ++E  +     V SS IR  L  G +  A  LLG  ++I+  VI G+
Sbjct: 114 KNL---FHGEVLVVNEF-SFDGLGVHSSAIRRFLRDGDIYRANRLLGREYSIKGRVISGQ 169

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G+   +PT N+ + P I  K GVYA R +  D T YS +   G       +G   +ES
Sbjct: 170 GLGKKSIYPTLNLVVEPYITPKNGVYATRTKIGDDT-YSSITFIGNR--FTTDGAFSIES 226

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
            +FD   +       V F + +R   KF  +++LK  + +D   AR +      LS +D 
Sbjct: 227 HLFDVDLKDNIDEVRVCFIERIRDNFKFNSLDELKTQISKDMLIARNV-AKCCDLSLQDD 285

Query: 321 II 322
            I
Sbjct: 286 YI 287


>gi|157165726|ref|YP_001467144.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter concisus 13826]
 gi|112801445|gb|EAT98789.1| riboflavin biosynthesis protein RibF [Campylobacter concisus 13826]
          Length = 297

 Score =  218 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 27/288 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             VAIG+FDG+H GH  +L+Q  +      + V+                  ++P   + 
Sbjct: 14  TAVAIGHFDGVHRGHKQLLKQLGEF---GGLVVI------------DKNKANITPKLKR- 57

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
               +        Y F       S E+FI  +  ++  +K ++ G  FRFG++RA D+  
Sbjct: 58  ---AEYSNYPCFLYDF-ESIKGLSGEEFIALLKRDFKNLKKIVVGFDFRFGRNRAWDKHD 113

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +                   V SS+IR  + +G++  A  L+G  ++IE +VI G
Sbjct: 114 LKRIFDGEVVVVDE----VCYDGMGVHSSSIRELIRQGNIDEANRLIGREYSIEGNVIKG 169

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IG      T N+ +   +L +EGVYA R R    T Y  V   G    +  +G   +E
Sbjct: 170 QGIGAKELVATLNLDIKSYLLPREGVYATRTRMGSYT-YGSVTFIGNR--LSTDGNFSVE 226

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           + I D       +   V F   LR   KF ++ +LK  +  D  +AR+
Sbjct: 227 THILDEVAPKVTKHVAVCFIKRLRDNKKFNNLSELKEQIKRDINEARQ 274


>gi|154175170|ref|YP_001408018.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter curvus 525.92]
 gi|112803302|gb|EAU00646.1| riboflavin biosynthesis protein RibF [Campylobacter curvus 525.92]
          Length = 288

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 28/289 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             VAIG+FDG+H GH  +L+Q  +      + V+                  ++P   + 
Sbjct: 14  TAVAIGHFDGVHRGHKQLLKQLGEY---GGLVVI------------DKNKANITPGLKR- 57

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
               +        Y F       S E+FI  +  ++  +K ++ G  FRFG++RA D+  
Sbjct: 58  ---AEYSNYPCFFYDF-ESIKGLSGEEFIALLKRDFKNLKKIVVGYDFRFGRNRAWDKHD 113

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +                   V SS IR  + +G V  A  L+G  ++IE DVI G
Sbjct: 114 LKRLFDGEVVVVDE----VCFNCMGVHSSAIRELIKQGDVSGANRLIGREYSIEGDVISG 169

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G     PT N+ +   +L K GVYA R R     +Y  V   G    +  +G   +E
Sbjct: 170 QGLGSKELVPTLNLDVKSYLLPKSGVYATRTRI-GYATYGSVTFIGNR--VSTDGKFSVE 226

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           + + D   ++      V F   LR  +KF+++ +LK  +  D K+AR +
Sbjct: 227 THVLD-EIDVSASHVAVCFIKRLRDNMKFENLNELKARIELDIKEARTM 274


>gi|85679189|gb|ABC72011.1| RibC [Listeria monocytogenes]
          Length = 213

 Score =  216 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L VK V+ G  + +GK   G    L +  +   F    +D+ + + S  +SS+N
Sbjct: 62  NYLV-ALNVKHVVAGFDYSYGKKGEGKMTDLAQYADGR-FEVTIVDK-QTDASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|325261644|ref|ZP_08128382.1| putative riboflavin biosynthesis protein RibF [Clostridium sp. D5]
 gi|324033098|gb|EGB94375.1| putative riboflavin biosynthesis protein RibF [Clostridium sp. D5]
          Length = 298

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 32/317 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M    NIE       +++   VA G+FDGIH GH  ++E+ +   I  N    VLS    
Sbjct: 1   MDRLKNIE-------NMESTCVAFGSFDGIHKGHLAVVEKLVAEGIRKNCKSVVLS---- 49

Query: 59  PRTIIQSSSPIF--TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                     +    L+    +   LEK G    + Y           E+F++ +++  L
Sbjct: 50  ---CFSEEEAVKNNVLTTEEEKAYFLEKAGVDTFVSYN----IEGTQTEEFLRTMIIGTL 102

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K ++ G + +       +  +L+    + G   + ++  R +   I  S  IR A   
Sbjct: 103 GAKVIVAGKENK-------ELSMLEHICGQEGIELITVETARYHGDVITGS-LIRKAFLD 154

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQ 235
               +   + G+ + +  +V HG+ +GRT+G PTAN+ +    ++   GVYA     ++ 
Sbjct: 155 CRFEDVMDMCGHPYVMIGEVQHGKALGRTVGMPTANLGVADRKLMPPSGVYATLTNIEN- 213

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             Y G+ N G  P++     + +E+F+ DFS++IYG+   +    Y+R   KF  ++K++
Sbjct: 214 EVYKGLTNIGTRPSVDSMPYITIETFLLDFSRDIYGKTLVMEVHLYIRGVQKFDSLDKVQ 273

Query: 296 IYMGEDEKKARKILESS 312
             + +D  + ++ L+S+
Sbjct: 274 EQVQKDLNQVKEYLDST 290


>gi|109947355|ref|YP_664583.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter acinonychis str. Sheeba]
 gi|109714576|emb|CAJ99584.1| riboflavin kinase / FMN adenylyltransferase [Helicobacter
           acinonychis str. Sheeba]
          Length = 279

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 67/300 (22%), Positives = 134/300 (44%), Gaps = 26/300 (8%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++               +P    +I+       
Sbjct: 5   SISSEPKIKSLAIGKFDGLHLGHQALFKELK-------------DPKALLVIEKEHYTKG 51

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P   + K+      +  + + +  E +  +A  F++ +  ++  ++ ++ G  F+FG
Sbjct: 52  YLTPLKYRAKL-----VNMPLFFVYLEEISRLNALDFLELLKKKFPNLERLVVGYDFKFG 106

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
             R  +   L++  +     ++ + E++  ++  V S  IR AL  G +  A  LLG  +
Sbjct: 107 YQRQNNALFLKEHFK----ESIIVPEVKV-QNISVHSKTIRLALDHGDLSLANKLLGRPY 161

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            +  +VI G+ +G     PT N++    IL   GVYA   + +DQT    V+  G    +
Sbjct: 162 EVCGEVIKGQGLGHKELAPTLNLKTKDFILPSFGVYASLVKIKDQTYQRSVSFIGNR--L 219

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +    +E  + D   E   +   +   + +R  + F  +++LK  + +D   A++IL 
Sbjct: 220 STDQNFAIECHVLDTIIENPPKELALRLVEKIRDNMHFNSLKELKNQIQQDISIAKEILR 279


>gi|325995644|gb|ADZ51049.1| Riboflavin kinase / FMN adenylyltransferase [Helicobacter pylori
           2018]
 gi|325997240|gb|ADZ49448.1| Riboflavin kinase / FMN adenylyltransferase [Helicobacter pylori
           2017]
          Length = 280

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 133/292 (45%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKL-----VKMPLFFVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  ++  V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-QNISVHSKIIKLALSHGDLSLANKLLGRYYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL 
Sbjct: 229 ECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEILR 280


>gi|307637052|gb|ADN79502.1| riboflavin kinase/FMN adenylyltransferase [Helicobacter pylori 908]
          Length = 279

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 133/292 (45%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 15  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 60  AKL-----VKMPLFFVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 114

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  ++  V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 115 FLKERFEK----TIIVPEVKI-QNISVHSKIIKLALSHGDLSLANKLLGRYYEVCGEVIS 169

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    +
Sbjct: 170 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFAI 227

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL 
Sbjct: 228 ECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEILR 279


>gi|15611406|ref|NP_223057.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori J99]
 gi|4154866|gb|AAD05918.1| RIBOFLAVIN KINASE [Helicobacter pylori J99]
          Length = 280

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKL-----VKMPLFFVYLEEISQLNALEFLDLLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  ++  V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-QNISVHSKIIKLALSHGDLSLANKLLGRYYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDHNFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++IL 
Sbjct: 229 ECHVLDTIIENPPKEIALRWVQKIRDNMRFNSLKELKNQIQQDILMAKEILR 280


>gi|254779054|ref|YP_003057159.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B38]
 gi|254000965|emb|CAX28909.1| Bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B38]
          Length = 280

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A  F+  +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKL-----VGMPLFFVYLEEISQLNALDFLDLLKKKFPHLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKIIKLALSHGDLSLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQNFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 229 ECHVLDTIIEKPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR 280


>gi|223039665|ref|ZP_03609951.1| riboflavin biosynthesis protein RibF [Campylobacter rectus RM3267]
 gi|222879048|gb|EEF14143.1| riboflavin biosynthesis protein RibF [Campylobacter rectus RM3267]
          Length = 293

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 28/289 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             VAIG+FDG+H GH  +L++         + V+                  ++P   + 
Sbjct: 14  TAVAIGHFDGVHRGHKELLKRLGVY---GGLVVI------------DKNKANITPGLKRA 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +            Y F  E    S ++FI  +  ++  ++ ++ G  FRFG++RA D+  
Sbjct: 59  EYSR----YPCFLYDFN-EIKGLSGDEFIALLKRDFKNLQKIVVGFDFRFGRNRAWDKHD 113

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++    +    V +DE    +   V SS IR  + +G +  A  LLG  ++IE  VI G
Sbjct: 114 LRRI---FDGEAVIVDEFC-FEGMGVHSSAIREYIKQGEIYRANRLLGREYSIEGRVIKG 169

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + IG     PT N+ +   +L +EGVYA R R     +Y  V   G    M  +G   +E
Sbjct: 170 QGIGSRELVPTLNLDVKSYLLPREGVYATRTRI-GYKTYGSVTFIGNR--MSTDGSFSIE 226

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           + + + +   + +   V F   LR   +F+ +E+LK  +G D K+A + 
Sbjct: 227 THVLNENI-AHARDVAVCFIKRLRDNRRFESLEELKGQIGIDIKQAMEF 274


>gi|281324161|gb|ADA60622.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324167|gb|ADA60625.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324169|gb|ADA60626.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALHVQHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   N  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDNQALSIEVYILD 213


>gi|298736697|ref|YP_003729227.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B8]
 gi|298355891|emb|CBI66763.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori B8]
          Length = 280

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  +   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEHEVKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG  R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHGRQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +   VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGKVISDQGLGHKELVPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDRNFAIECHVLDTIIEKPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|15645701|ref|NP_207878.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori 26695]
 gi|2314235|gb|AAD08130.1| riboflavin biosynthesis regulatory protein (ribC) [Helicobacter
           pylori 26695]
          Length = 280

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A  F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISQLNALDFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKV-QEISVHSKMIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   + +   +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQNFAIECHVLDTIIENPPQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|187765102|gb|ACD36390.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765104|gb|ACD36391.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765108|gb|ACD36393.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765112|gb|ACD36395.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765114|gb|ACD36396.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765130|gb|ACD36404.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765134|gb|ACD36406.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765136|gb|ACD36407.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765138|gb|ACD36408.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765142|gb|ACD36410.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765146|gb|ACD36412.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765148|gb|ACD36413.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765152|gb|ACD36415.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765156|gb|ACD36417.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765158|gb|ACD36418.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765160|gb|ACD36419.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765162|gb|ACD36420.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765164|gb|ACD36421.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765166|gb|ACD36422.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765170|gb|ACD36424.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765174|gb|ACD36426.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765180|gb|ACD36429.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765184|gb|ACD36431.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765196|gb|ACD36437.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765198|gb|ACD36438.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765202|gb|ACD36440.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765204|gb|ACD36441.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765208|gb|ACD36443.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765214|gb|ACD36446.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765216|gb|ACD36447.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765220|gb|ACD36449.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765224|gb|ACD36451.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765228|gb|ACD36453.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765232|gb|ACD36455.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765236|gb|ACD36457.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765238|gb|ACD36458.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765246|gb|ACD36462.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765252|gb|ACD36465.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765256|gb|ACD36467.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765258|gb|ACD36468.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765264|gb|ACD36471.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765272|gb|ACD36475.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765276|gb|ACD36477.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765278|gb|ACD36478.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765286|gb|ACD36482.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765292|gb|ACD36485.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765294|gb|ACD36486.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765302|gb|ACD36490.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765304|gb|ACD36491.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765306|gb|ACD36492.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765308|gb|ACD36493.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765310|gb|ACD36494.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765314|gb|ACD36496.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765316|gb|ACD36497.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765318|gb|ACD36498.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765320|gb|ACD36499.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765322|gb|ACD36500.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765330|gb|ACD36504.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765334|gb|ACD36506.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765336|gb|ACD36507.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765340|gb|ACD36509.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765350|gb|ACD36514.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765362|gb|ACD36520.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765374|gb|ACD36526.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765386|gb|ACD36532.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765392|gb|ACD36535.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765394|gb|ACD36536.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765398|gb|ACD36538.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765408|gb|ACD36543.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765420|gb|ACD36549.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765434|gb|ACD36556.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765440|gb|ACD36559.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765442|gb|ACD36560.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765452|gb|ACD36565.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765456|gb|ACD36567.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765460|gb|ACD36569.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765466|gb|ACD36572.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324151|gb|ADA60617.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324155|gb|ADA60619.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324157|gb|ADA60620.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324159|gb|ADA60621.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324163|gb|ADA60623.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324165|gb|ADA60624.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324173|gb|ADA60628.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324175|gb|ADA60629.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324177|gb|ADA60630.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324179|gb|ADA60631.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324181|gb|ADA60632.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324183|gb|ADA60633.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324185|gb|ADA60634.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324187|gb|ADA60635.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324189|gb|ADA60636.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324191|gb|ADA60637.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324193|gb|ADA60638.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324195|gb|ADA60639.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324197|gb|ADA60640.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324199|gb|ADA60641.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324201|gb|ADA60642.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324203|gb|ADA60643.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324207|gb|ADA60645.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324209|gb|ADA60646.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324211|gb|ADA60647.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324213|gb|ADA60648.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324215|gb|ADA60649.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALHVQHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|187765116|gb|ACD36397.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765118|gb|ACD36398.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765122|gb|ACD36400.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765124|gb|ACD36401.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765126|gb|ACD36402.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765132|gb|ACD36405.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765140|gb|ACD36409.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765144|gb|ACD36411.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765178|gb|ACD36428.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765182|gb|ACD36430.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765188|gb|ACD36433.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765190|gb|ACD36434.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765192|gb|ACD36435.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765194|gb|ACD36436.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765200|gb|ACD36439.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765206|gb|ACD36442.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765210|gb|ACD36444.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765212|gb|ACD36445.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765218|gb|ACD36448.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765222|gb|ACD36450.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765226|gb|ACD36452.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765240|gb|ACD36459.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765250|gb|ACD36464.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765260|gb|ACD36469.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765268|gb|ACD36473.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765282|gb|ACD36480.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765284|gb|ACD36481.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765290|gb|ACD36484.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765300|gb|ACD36489.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765312|gb|ACD36495.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765324|gb|ACD36501.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765328|gb|ACD36503.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765338|gb|ACD36508.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765342|gb|ACD36510.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765344|gb|ACD36511.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765348|gb|ACD36513.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765352|gb|ACD36515.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765358|gb|ACD36518.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765360|gb|ACD36519.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765364|gb|ACD36521.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765366|gb|ACD36522.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765368|gb|ACD36523.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765370|gb|ACD36524.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765372|gb|ACD36525.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765376|gb|ACD36527.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765378|gb|ACD36528.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765380|gb|ACD36529.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765382|gb|ACD36530.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765388|gb|ACD36533.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765396|gb|ACD36537.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765402|gb|ACD36540.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765404|gb|ACD36541.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765410|gb|ACD36544.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765414|gb|ACD36546.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765422|gb|ACD36550.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765428|gb|ACD36553.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765430|gb|ACD36554.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765432|gb|ACD36555.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765436|gb|ACD36557.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765444|gb|ACD36561.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765446|gb|ACD36562.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765450|gb|ACD36564.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765464|gb|ACD36571.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324153|gb|ADA60618.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324171|gb|ADA60627.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|187765120|gb|ACD36399.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765332|gb|ACD36505.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765346|gb|ACD36512.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765356|gb|ACD36517.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765384|gb|ACD36531.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L +  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|108562785|ref|YP_627101.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori HPAG1]
 gi|107836558|gb|ABF84427.1| riboflavin kinase [Helicobacter pylori HPAG1]
          Length = 280

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E ++ +A +F++ +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISHLNASEFLELLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG  R  D   L++R EK    T+ + E++  ++  V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHGRQNDALFLKERFEK----TIIVPEVKI-QNISVHSKMIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +   VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGKVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   + +   +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|308184162|ref|YP_003928295.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SJM180]
 gi|308060082|gb|ADO01978.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SJM180]
          Length = 280

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 131/292 (44%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKL-----VGMPLFFVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +   VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGKVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 229 ECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR 280


>gi|187765176|gb|ACD36427.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765186|gb|ACD36432.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765230|gb|ACD36454.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765242|gb|ACD36460.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765244|gb|ACD36461.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765254|gb|ACD36466.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324149|gb|ADA60616.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|281324205|gb|ADA60644.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             +V  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYVV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|183601978|ref|ZP_02963347.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682890|ref|YP_002469273.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190467|ref|YP_002967861.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195873|ref|YP_002969428.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218863|gb|EDT89505.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620540|gb|ACL28697.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248859|gb|ACS45799.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250427|gb|ACS47366.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178191|gb|ADC85437.1| Riboflavin kinase [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793454|gb|ADG32989.1| riboflavin kinase [Bifidobacterium animalis subsp. lactis V9]
          Length = 428

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 84/428 (19%), Positives = 155/428 (36%), Gaps = 118/428 (27%)

Query: 1   MHVFH-----NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVL 53
           M +F      +  +     +  K  VV +G FDG+H+GHH ++E+ ++ A        V+
Sbjct: 1   MDIFRLTPAADGNVAWPTLSTSKKSVVTVGAFDGLHVGHHAVIEETVRQARKLDAYSVVI 60

Query: 54  SFNPHPRTIIQSSSP------------IFTLSPPSIQEKILEKMGFSALIRYKFTLETAN 101
            F+P P  +   +                 ++    + ++L +M    ++  ++T+  + 
Sbjct: 61  MFDPRPAFVHAYAKAHAGKDVPAGVHDPEAITGVDARLRMLSRMHVDYVLIVRYTIAFSE 120

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG-FHTVFI------ 154
            S   F+ ++ V  L ++ ++ G   R G +  GD   ++   E  G F    +      
Sbjct: 121 KSFRFFLGQL-VGKLGMRMLVLGEDARMGANLEGDIKKIRTLAEATGVFELEVVTNQGGT 179

Query: 155 -------------------DELRNNKS---------------QIVSSSNIRTALTKGHVL 180
                              D L                    +  SS+N+R  L++G V 
Sbjct: 180 VRVPERFTPTAPNEPGEPGDPLEGLGKAERRAWSKKHNAREVRNQSSTNVRYLLSQGRVQ 239

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQT--- 236
            A  +LG+   +E  V HGE+ GRT+GFPTAN+       L  +GVYA            
Sbjct: 240 AANEILGHAHAVEGVVEHGEERGRTIGFPTANIAEPMEGYLPVDGVYAGWLVDLGPADEY 299

Query: 237 -------------------------------------------------SYSGVANFGRN 247
                                                             +    + G  
Sbjct: 300 ERDQQQLSGKAADGEAVEAASVTVSDTPVVSHRFSSSRVDSRLAAQSPFRWPAAISIGTK 359

Query: 248 PTMVPNG---PLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           PT   +      +LE++   D   ++YG R  V F  +LRP+IKF   ++L   +  + +
Sbjct: 360 PTYSESTGLNERVLEAYALTDEWLDLYGHRVRVEFERFLRPQIKFGSTDELVAELKHNVE 419

Query: 304 KARKILES 311
           + +++L +
Sbjct: 420 ETKELLGA 427


>gi|187765172|gb|ACD36425.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + ++ S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSDLSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|85679169|gb|ABC72001.1| RibC [Listeria monocytogenes]
 gi|85679173|gb|ABC72003.1| RibC [Listeria monocytogenes]
 gi|85679175|gb|ABC72004.1| RibC [Listeria monocytogenes]
 gi|85679177|gb|ABC72005.1| RibC [Listeria monocytogenes]
 gi|85679179|gb|ABC72006.1| RibC [Listeria monocytogenes]
 gi|85679183|gb|ABC72008.1| RibC [Listeria monocytogenes]
 gi|85679185|gb|ABC72009.1| RibC [Listeria monocytogenes]
 gi|187765106|gb|ACD36392.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765168|gb|ACD36423.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765248|gb|ACD36463.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765262|gb|ACD36470.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765266|gb|ACD36472.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765274|gb|ACD36476.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765298|gb|ACD36488.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765326|gb|ACD36502.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765400|gb|ACD36539.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765406|gb|ACD36542.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765412|gb|ACD36545.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765416|gb|ACD36547.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765418|gb|ACD36548.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765424|gb|ACD36551.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765426|gb|ACD36552.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765438|gb|ACD36558.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765454|gb|ACD36566.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765462|gb|ACD36570.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765468|gb|ACD36573.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L +  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|187765150|gb|ACD36414.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + K+G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQFSELSPQAFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   +  +SS+N
Sbjct: 62  NYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAATDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|210134555|ref|YP_002300994.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori P12]
 gi|210132523|gb|ACJ07514.1| bifunctional riboflavin kinase / FMN adenylyltransferase
           [Helicobacter pylori P12]
          Length = 280

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG  R  D   L++R EK    T+ + E++  ++  V S  I+ AL+ G +L A  LLG 
Sbjct: 106 FGHGRQNDALFLKERFEK----TIIVPEVKI-QNISVHSKTIKLALSHGDLLLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +   VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGKVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   +   + +   +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|225021175|ref|ZP_03710367.1| hypothetical protein CORMATOL_01187 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946082|gb|EEG27291.1| hypothetical protein CORMATOL_01187 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 256

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 14/255 (5%)

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L   + +  +    G   ++   F +  A  S E+F  +++ + L+ + V+ G+ F 
Sbjct: 2   PPLLGTVTQRASLAAAQGIDHILAMSFNVAVAQLSPEEFFLQIVRDTLKARAVVVGSNFT 61

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FGK  AG   +L++ G KYG     ID L  + +  + S+ IR  L +G V  A   LG 
Sbjct: 62  FGKKAAGTTEVLRELGHKYGIEVHVIDLLVEDDAV-ICSTLIRRLLGEGKVREANAALGR 120

Query: 189 RFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQ----------T 236
            F++  +V+ G    GR LGFPTAN+  S  + L ++ VYA       Q           
Sbjct: 121 EFSVAGEVVRGAGRGGRELGFPTANLYFSDLVALPQDAVYAGWLMVISQAPIDGDMKQGV 180

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
            Y    + G NPT   +    +ES++   + ++YG    V F D++R   KF  + +L  
Sbjct: 181 RYPAAISVGHNPTF-GDKRRSVESYVIGKNADLYGHTVVVEFVDWVRSMEKFTGVPELLA 239

Query: 297 YMGEDEKKARKILES 311
            + +D     +ILE+
Sbjct: 240 AIHQDVADTLRILEA 254


>gi|187765110|gb|ACD36394.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765128|gb|ACD36403.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765154|gb|ACD36416.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765234|gb|ACD36456.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765270|gb|ACD36474.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765280|gb|ACD36479.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765288|gb|ACD36483.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765296|gb|ACD36487.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765354|gb|ACD36516.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765458|gb|ACD36568.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|85679171|gb|ABC72002.1| RibC [Listeria monocytogenes]
 gi|85679181|gb|ABC72007.1| RibC [Listeria monocytogenes]
 gi|85679187|gb|ABC72010.1| RibC [Listeria monocytogenes]
 gi|85679191|gb|ABC72012.1| RibC [Listeria monocytogenes]
          Length = 213

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   + + + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKVEKMAELGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L K  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+++  D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVKEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|317013803|gb|ADU81239.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Gambia94/24]
          Length = 280

 Score =  211 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYNKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D  
Sbjct: 61  AKL-----VKMPLFFVYLEEISQLNALEFLELLKEKFPNLERLVVGYDFRFGHGRQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  ++  V S  I+ AL+ G +L A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKV-QNISVHSKMIKLALSHGDLLLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +DQ     V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDQIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E    D   E   +   + +   +R  ++F  +++LK  + +D   A++IL 
Sbjct: 229 ECHAIDTIIENPPKEIALRWVQKIRDNMRFNSLKELKNQIQQDILMAKEILR 280


>gi|297379581|gb|ADI34468.1| riboflavin biosynthesis protein RibF [Helicobacter pylori v225d]
          Length = 280

 Score =  211 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E ++ +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISSLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G+  
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGKR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|317181703|dbj|BAJ59487.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F57]
          Length = 280

 Score =  211 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E ++ +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISSLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|293510043|ref|ZP_06668751.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M809]
 gi|291466987|gb|EFF09505.1| riboflavin biosynthesis protein RibF [Staphylococcus aureus subsp.
           aureus M809]
          Length = 229

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 9/226 (3%)

Query: 92  RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT 151
              F+   AN S E F++  +++   VK VI G  F FGK   G+  +LQ+      F+T
Sbjct: 1   MVNFSSRFANVSVEDFVENYIIKN-NVKEVIAGFDFTFGKFGKGNMTVLQEYDA---FNT 56

Query: 152 VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
             + + +  +++ +S+++IR  L  G +  A   LGY ++I+  V+ GEK GRT+GFPTA
Sbjct: 57  TIVSK-QEIENEKISTTSIRQDLINGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTA 115

Query: 212 NMQL-SPDILLKEGVYAIRFRTQ-DQTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQ 267
           N+Q     +L ++GVYA+      +   Y GVAN G  PT        +++E  IFDF  
Sbjct: 116 NIQPSDDYLLPRKGVYAVSIEIGTENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFED 175

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
            IYG+R TV++  +LRPEIKF  I+ L   M +D+ +A+ +L   +
Sbjct: 176 NIYGERVTVNWHHFLRPEIKFDGIDPLVKQMNDDKSRAKYLLAVDF 221


>gi|187765390|gb|ACD36534.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
 gi|187765448|gb|ACD36563.1| riboflavin kinase and FAD synthase [Listeria monocytogenes]
          Length = 213

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 51  TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
            VL+F+PHP  ++ +    +  L+P   +   + ++G   +   +FT + +  S + F+ 
Sbjct: 2   AVLTFDPHPSVVLSNIRKQVKYLTPLEDKAGKMAELGVDIMYVVRFTTQFSELSPQSFVD 61

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
             LV  L V+ V+ G  + +GK   G    L +  +   F    +D+ +   S  +SS+N
Sbjct: 62  NYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYADGR-FEVTIVDK-QTAASDKISSTN 118

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAI 228
           IR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA+
Sbjct: 119 IRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAV 178

Query: 229 RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
           +FR   +T   G+A+ G N T   +  L +E +I D
Sbjct: 179 KFRVNGETHL-GMASIGYNITFKDDQALSIEVYILD 213


>gi|308182531|ref|YP_003926658.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori PeCan4]
 gi|308064716|gb|ADO06608.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori PeCan4]
          Length = 280

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 30/292 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQ 78
           +AIG FDG+HLGH  + ++                  P+ ++      +    L+P   +
Sbjct: 16  LAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYR 60

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            K+         + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG +R  D  
Sbjct: 61  AKL-----VGMPLFFVYLEEISQLNALEFLELLKKKFPNLERLVVGYDFRFGHERQNDAL 115

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
            L++R EK    T+ + E++  ++  V S  I+ AL+ G +L A  LLG  + +  +VI 
Sbjct: 116 FLKERFEK----TIIVPEVKI-QNISVHSKIIKLALSHGDLLLANKLLGRPYEVCGEVIS 170

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            + +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +
Sbjct: 171 DQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAI 228

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 229 ECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEILR 280


>gi|188527168|ref|YP_001909855.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Shi470]
 gi|188143408|gb|ACD47825.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Shi470]
          Length = 280

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+      S  + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VSMPLFFVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDSIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|317009005|gb|ADU79585.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori India7]
          Length = 280

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 26/290 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF-TLSPPSIQEK 80
           +AIG FDG+HLGH  + ++               +P    II+        L+P   + K
Sbjct: 16  LAIGKFDGLHLGHQALFKELK-------------DPKALLIIEKKYYTKGYLTPLKYRAK 62

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +         + + +  E +  +A +F+  +  ++  ++ ++ G  FRFG +R  D   L
Sbjct: 63  L-----VGMPLFFVYLEEISRLNALEFLDLLKKKFPHLERLVVGYDFRFGHERQNDALFL 117

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++R EK    T+ + E++  K   V S  I+ AL+ G +L A  LLG  + +  +VI  +
Sbjct: 118 KERFEK----TIIVPEVKI-KEISVHSKRIKLALSHGDLLLANKLLGRPYEVCGEVISDQ 172

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G     PT N++    IL   GVYA   + +D      V+  G    +  +    +E 
Sbjct: 173 GLGHKELAPTLNIKTKDFILPGFGVYASLVKIKDPIYQKSVSFIGNR--LSTDQHFAIEC 230

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              D   E   +   +     +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 231 HALDTIIENPPKEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEILR 280


>gi|167759464|ref|ZP_02431591.1| hypothetical protein CLOSCI_01811 [Clostridium scindens ATCC 35704]
 gi|167663021|gb|EDS07151.1| hypothetical protein CLOSCI_01811 [Clostridium scindens ATCC 35704]
          Length = 278

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 21/294 (7%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           ++   VA G FDG+H GH  + ++ ++ A    +T          ++        LS   
Sbjct: 5   MQDTCVAYGYFDGMHKGHINVAKKTVETAKEKGLT--------SVVVSCKKVGEVLSTEE 56

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +E + ++ G    +      +    + E FI+ VLVE    K ++ G           +
Sbjct: 57  EKEYLFKETGVQEFVC----RDYEEMAEEDFIKNVLVEEYGAKVIVLGENHS-------N 105

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
              +++  +  G   V  +  +     ++++  +RTA           L G+ + +   V
Sbjct: 106 VAKVKEAAKVCGAEVVICEAAKAQDGTVITTEAVRTAFDASDFDKILELCGHPYIMIGSV 165

Query: 197 IHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
            HG+ +GRT+G PTAN+ ++ D L    GVYA   +  D   +  + N G+ P++     
Sbjct: 166 EHGKALGRTVGMPTANLGVADDKLKPPSGVYATSVKIDD-GVFKAMTNIGKRPSVDNYDY 224

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + +E+FI DF+++IYG++  +    ++R   KF ++E+++  + +D +K R++L
Sbjct: 225 VTIEAFILDFARDIYGKKIILGVRQFVRGVQKFDNLEQVQKQVQKDIEKVREVL 278


>gi|308061711|gb|ADO03599.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Cuz20]
          Length = 280

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKIEE-ISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|31544324|ref|NP_852902.1| multifunctional FAD synthetase/riboflavin kinase/tRNA-specific
           2-thiouridylase [Mycoplasma gallisepticum str. R(low)]
 gi|81572856|sp|Q7NBZ0|MNMA_MYCGA RecName: Full=Trifunctional protein ribF/mnmA; Includes: RecName:
           Full=FMN adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=tRNA-specific
           2-thiouridylase mnmA
 gi|31541168|gb|AAP56470.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(low)]
 gi|284930363|gb|ADC30302.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(high)]
          Length = 657

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 31/302 (10%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           ++++    KG  + IG FDGIH GH  + +Q+ +        +L+F+  P+         
Sbjct: 9   SKTIKEVNKGVDLVIGFFDGIHKGHAKLFKQSDRFN------LLTFDHIPK-------KQ 55

Query: 70  FTLSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             L P   + + L  + G   L+ Y   L   N SA++FI    ++ ++ K +I G+ F+
Sbjct: 56  RLLYPKVDEIEQLSALSGLEQLLVY--DLLNNNLSAQEFIDNY-IKLIQPKRIIVGSDFK 112

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG D+            K G+  V +      K    S+S I+  +    +  A  LL  
Sbjct: 113 FGSDQVD-----YSLFAKNGYEVVVV------KKDHCSTSEIKKLIINCDLDQANKLLLT 161

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            F ++  VI   + GRT+GF TAN+ L   ++ L EG Y  +    D  +Y G+   G+ 
Sbjct: 162 PFYLKGTVIKNAQRGRTIGFVTANIILDNQLIELTEGSYVCK-VIVDNKTYQGICFIGKP 220

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T         E+ IFDF Q+IYG++  V  + ++RP +KF  I +LK  +  D+K A  
Sbjct: 221 KTF-DEKQRQCEAHIFDFDQDIYGKKIKVELYQFIRPTVKFNSINELKEAIENDKKAALS 279

Query: 308 IL 309
             
Sbjct: 280 FF 281


>gi|308063221|gb|ADO05108.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Sat464]
          Length = 280

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNASEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   +   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPKEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|217033348|ref|ZP_03438779.1| hypothetical protein HP9810_9g101 [Helicobacter pylori 98-10]
 gi|216944289|gb|EEC23714.1| hypothetical protein HP9810_9g101 [Helicobacter pylori 98-10]
 gi|261837796|gb|ACX97562.1| riboflavin kinase [Helicobacter pylori 51]
 gi|317180742|dbj|BAJ58528.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F32]
          Length = 280

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|261839210|gb|ACX98975.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori 52]
          Length = 280

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG++R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGRERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|317012200|gb|ADU82808.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori Lithuania75]
          Length = 280

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISQLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +L A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLLLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   +   + +   +R  ++F  +++LK  + +D   A++I
Sbjct: 220 -LSADQHFAIECHVLDAIIENPPKEIALRWVQKIRDNMRFSSLKELKNQIQQDILMAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|315586352|gb|ADU40733.1| riboflavin biosynthesis protein RibF [Helicobacter pylori 35A]
          Length = 280

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG++R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGRERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANQLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|332673207|gb|AEE70024.1| riboflavin biosynthesis protein RibF [Helicobacter pylori 83]
          Length = 280

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRTKL-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|317179245|dbj|BAJ57033.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F30]
          Length = 280

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K          + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKF-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  K   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELVPTLNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  ++F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMRFSSLKELKDQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|319639914|ref|ZP_07994642.1| riboflavin kinase [Bacteroides sp. 3_1_40A]
 gi|317388453|gb|EFV69304.1| riboflavin kinase [Bacteroides sp. 3_1_40A]
          Length = 247

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 11/241 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +  +I  +Q+LP      V  IG FDG+H GH  ++ Q  ++   +     +++F  H
Sbjct: 1   MKIISDIN-HQTLP----PSVATIGFFDGVHRGHRFLINQVKEVAAKDGLYSALITFPVH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR +IQ++     LS P+ + ++LE M         FT E + +SA +F+Q +      +
Sbjct: 56  PRQVIQTAYRPQLLSSPTEKLELLETMQVDYCFLLPFTQELSLFSAREFMQLLR-NKFNI 114

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            T++ G   RFG +R+ +     + GE+   + V      + + + +SSS IR  L +G 
Sbjct: 115 HTLVIGYDHRFGHNRSENFEDYCRYGEELNIYIVRARAYTDKEGK-ISSSVIRQLLKEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDILLKEGVYAIRFRTQDQT 236
           V  AA  LGY + ++  V+ G K+GR +GFPTAN+Q+     ++  EGVYA+    + + 
Sbjct: 174 VSQAAKFLGYNYYLDGTVVDGYKVGRKIGFPTANLQVDCSDKLIPSEGVYAVYVYVEGKK 233

Query: 237 S 237
            
Sbjct: 234 M 234


>gi|317177174|dbj|BAJ54963.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori F16]
          Length = 280

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 30/302 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF- 70
           S+ +  K   +AIG FDG+HLGH  + ++                  P+ ++      + 
Sbjct: 6   SISSEPKIKSLAIGKFDGLHLGHQALFKELKD---------------PKALLIIEKKHYT 50

Query: 71  --TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              L+P   + K+         + + +  E +  +A +F+  +  ++  ++ ++ G  FR
Sbjct: 51  KGYLTPLKYRAKL-----VGMPLFFVYLEEISPLNALEFLDLLKKKFPHLERLVVGYDFR 105

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG +R  D   L++R EK    T+ + E++  +   V S  I+ AL+ G +  A  LLG 
Sbjct: 106 FGHERQNDALFLKERFEK----TIIVPEVKIEE-ISVHSKTIKLALSHGDLSLANKLLGR 160

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
            + +  +VI  + +G     PT N++    IL   GVYA   + +D      V+  G   
Sbjct: 161 PYEVCGEVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLAKIKDSIYQKSVSFIGNR- 219

Query: 249 TMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
            +  +    +E  + D   E   Q   +     +R  + F  +++LK  + +D  +A++I
Sbjct: 220 -LSTDQHFAIECHVLDTIIENPPQEIALRLVQKIRDNMLFSSLKELKNQIQQDILRAKEI 278

Query: 309 LE 310
           L 
Sbjct: 279 LR 280


>gi|213423835|ref|ZP_03356815.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 193

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 2/191 (1%)

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
           FI ++LVE L V+ +  G  FRFG  RAGD  +LQK G +YGF               +S
Sbjct: 1   FISELLVERLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRIS 59

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +   +GVY
Sbjct: 60  STAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVY 119

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEI 286
           A+           GVAN G  PT+       LE  + D   ++YG+   V     +R E 
Sbjct: 120 AVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQ 178

Query: 287 KFKDIEKLKIY 297
           +F  +++LK  
Sbjct: 179 RFASLDELKSA 189


>gi|317010638|gb|ADU84385.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori SouthAfrica7]
          Length = 280

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 26/290 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF-TLSPPSIQEK 80
           +AIG FDG+HLGH  + ++               +P    +I+        L+P   + K
Sbjct: 16  LAIGKFDGLHLGHQALFKELK-------------DPKALLVIEKKHYTKGYLTPLKYRAK 62

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +         + + +  E +  +A  F++ +  ++  ++ ++ G  F+FG  R  D   L
Sbjct: 63  L-----VCMPLFFVYLEEISRLNALDFLELLKKKFPNLERLVVGYDFKFGYQRQNDALFL 117

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++  +     ++ + E++  ++  V S  I+ AL+ G +L A  LLG  + +  +VI  +
Sbjct: 118 KEHFK----ESIIVPEVKV-QNISVHSKMIKLALSHGDLLLANKLLGRYYEVCGEVISDQ 172

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G     PT N++    IL   GVYA   R +DQ     V+  G    +  +    +E 
Sbjct: 173 GLGHKELVPTLNIKTKDFILPSFGVYASLVRIKDQIYQKSVSFIGNR--LSTDQHFAIEC 230

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + D   E   Q+  + + + +R  + F  +++LK  + +D   A++IL 
Sbjct: 231 HVLDAIIENPPQKLALRWVEKIRDNMHFHSLKELKNQIQQDILIAKEILR 280


>gi|110004499|emb|CAK98836.1| putative riboflavin kinase / fad synthetase protein [Spiroplasma
           citri]
          Length = 295

 Score =  206 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 17/301 (5%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT--IIQSSSPIFT 71
           P++ +  V  +G FDG H GH  ++ + ++I     +  L F         +Q  +    
Sbjct: 9   PSYKEAKVACLGLFDGFHQGHLKLITRLMEIKKQHNLATLFFTMSQSVSDFLQQVN--TK 66

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L     +++I+EK+GF   +    T    N S +QF+  +L +   V  ++ G+ FRFGK
Sbjct: 67  LVDNHSKQQIVEKLGFDYYLEVPITTAFINLSPKQFL-TILKKQFNVTKIVIGSDFRFGK 125

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           +R GD   +      +G   V++   ++N   + SS+ IR  L +  + +A  LL   + 
Sbjct: 126 NREGDFNDIIAF---FGQENVYLITRQDN---LFSSTTIRNFLLQYDLSSANKLLYEDYN 179

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           +  +V  G+++G T+ FPTAN+ L   ++L  GVY      Q    Y  + ++      +
Sbjct: 180 LRGEVKPGKQLGWTINFPTANIYLPQKVILPHGVYITETLAQG-KFYPSMTSY-----RL 233

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             G  ++E ++ + + ++YGQ   V F  YLR  IK  ++ +L   + +D          
Sbjct: 234 FEGKEVVEIYLLNVNLDLYGQEIIVYFKKYLRENIKINNLTELVTLLKQDFVNTLAFFAK 293

Query: 312 S 312
            
Sbjct: 294 K 294


>gi|284931128|gb|ADC31066.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. F]
          Length = 657

 Score =  206 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 31/302 (10%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           ++++    KG  + IG FDGIH GH  + +Q+ +        +L+F+  P+         
Sbjct: 9   SKTIKEVNKGVDLVIGFFDGIHKGHAKLFKQSDRFN------LLTFDHIPK-------KQ 55

Query: 70  FTLSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             L P   + + L  + G   L+ Y   L   N SA++FI    ++ ++ K +I G+ F+
Sbjct: 56  RLLYPKVDEIEQLSALSGLEQLLVY--DLLNNNLSAQEFIDNY-IKLIQPKRIIVGSDFK 112

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
           FG D+            K G+  V +      K    S+S I+  +    +  A  LL  
Sbjct: 113 FGSDQVD-----YSLFTKNGYEVVVV------KKDHCSTSEIKKLIINCDLDQANRLLVA 161

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            F ++  VI   + GRT+GF TAN+ L   ++ L EG Y  +    D  ++ G+   G+ 
Sbjct: 162 PFYLKGTVIKNAQRGRTIGFATANIILDNQLIELTEGSYVCKI-IVDNKTHQGICFIGKP 220

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            T         E+ IFDF Q+IY ++  V    ++RP +KF  I +LK  +  D+K A  
Sbjct: 221 KTF-DEKQRQCEAHIFDFDQDIYEKKIKVELHQFIRPTVKFNSINELKEAIENDKKTALS 279

Query: 308 IL 309
             
Sbjct: 280 FF 281


>gi|224993234|gb|ACN76304.1| RibC [Listeria innocua]
          Length = 211

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + +  +G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMANLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L VK V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALNVKHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993294|gb|ACN76334.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L +  +   F    
Sbjct: 61  RFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAQYADGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993266|gb|ACN76320.1| RibC [Listeria monocytogenes]
 gi|224993288|gb|ACN76331.1| RibC [Listeria monocytogenes]
 gi|224993292|gb|ACN76333.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKI--ANNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +I         VL+F+PHP  ++ +    +  L+P   + + + K+G   +   
Sbjct: 1   VIKQAKQIAGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +   F    
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993186|gb|ACN76280.1| RibC [Listeria innocua]
 gi|224993190|gb|ACN76282.1| RibC [Listeria innocua]
 gi|224993192|gb|ACN76283.1| RibC [Listeria innocua]
 gi|224993194|gb|ACN76284.1| RibC [Listeria innocua]
 gi|224993200|gb|ACN76287.1| RibC [Listeria innocua]
 gi|224993204|gb|ACN76289.1| RibC [Listeria innocua]
 gi|224993212|gb|ACN76293.1| RibC [Listeria innocua]
 gi|224993218|gb|ACN76296.1| RibC [Listeria innocua]
 gi|224993220|gb|ACN76297.1| RibC [Listeria innocua]
 gi|224993222|gb|ACN76298.1| RibC [Listeria innocua]
 gi|224993228|gb|ACN76301.1| RibC [Listeria innocua]
 gi|224993230|gb|ACN76302.1| RibC [Listeria innocua]
 gi|224993238|gb|ACN76306.1| RibC [Listeria innocua]
 gi|224993246|gb|ACN76310.1| RibC [Listeria innocua]
          Length = 211

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + +  +G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMANLGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S   F+   LV  L VK V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPRAFVDNYLV-ALNVKHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|268679993|ref|YP_003304424.1| riboflavin biosynthesis protein RibF [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618024|gb|ACZ12389.1| riboflavin biosynthesis protein RibF [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 293

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 27/292 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG+FDGIH+GH  ++++     ++  + V+                  L+P   + + 
Sbjct: 16  LAIGSFDGIHVGHRQLIKRL---GHHGALCVI------------DKDEANLTPGIKRSEY 60

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
               G   +    F L+  + S  +FI  +  E++ +K ++ G  F FGK RA +   LQ
Sbjct: 61  ---AGCPCMF-LHF-LKVKHLSGAEFIALLQKEFVNLKKIVVGYDFFFGKHRACNAYDLQ 115

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K    +      ++E    +   + SS IRT L +G +  A   LG  ++I   ++ G+ 
Sbjct: 116 KL---FDGEVEVVEEFTY-QGISIHSSLIRTYLIEGRIEEANRFLGREYSITGSIVSGQG 171

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           IG+    PT N+++S  ++  EGVYA R R   Q  Y  V+  G   +   +G   +E+ 
Sbjct: 172 IGKKELVPTLNLKISDYLIPHEGVYATRSRI-GQNVYDSVSFIGTRHS--TDGMFSVETH 228

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           I             + F  +LR   KF  +  LK  +  D K A+K L+S  
Sbjct: 229 IIGEDILEVTTPVELFFVAFLRENQKFNALSDLKKQIECDIKSAQKFLKSCR 280


>gi|224993250|gb|ACN76312.1| RibC [Listeria monocytogenes]
 gi|224993252|gb|ACN76313.1| RibC [Listeria monocytogenes]
 gi|224993264|gb|ACN76319.1| RibC [Listeria monocytogenes]
 gi|224993268|gb|ACN76321.1| RibC [Listeria monocytogenes]
 gi|224993270|gb|ACN76322.1| RibC [Listeria monocytogenes]
 gi|224993272|gb|ACN76323.1| RibC [Listeria monocytogenes]
 gi|224993274|gb|ACN76324.1| RibC [Listeria monocytogenes]
 gi|224993276|gb|ACN76325.1| RibC [Listeria monocytogenes]
 gi|224993278|gb|ACN76326.1| RibC [Listeria monocytogenes]
 gi|224993280|gb|ACN76327.1| RibC [Listeria monocytogenes]
 gi|224993282|gb|ACN76328.1| RibC [Listeria monocytogenes]
 gi|224993286|gb|ACN76330.1| RibC [Listeria monocytogenes]
 gi|224993290|gb|ACN76332.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +   F    
Sbjct: 61  RFTTQFSELSPQAFVDNYLV-ALHVQHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|42525592|ref|NP_970690.1| riboflavin biosynthesis protein RibF, putative [Treponema denticola
           ATCC 35405]
 gi|41815603|gb|AAS10571.1| riboflavin biosynthesis protein RibF, putative [Treponema denticola
           ATCC 35405]
          Length = 307

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/314 (24%), Positives = 141/314 (44%), Gaps = 17/314 (5%)

Query: 7   IEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           + I   L     G   VA+G FDG+H+GH  ++++  K   N    ++S        + +
Sbjct: 1   MRITDKLQPITNGESCVAVGFFDGLHVGHRAVIDRLCK-CKNLRPVLIS--------LSN 51

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +S    +     +  +L+      +      +   N +AE F   VL + L  KT++ G 
Sbjct: 52  NSSP-VIYTEEEKSYLLQNGKLDTMFSLSEDI-IKNMTAESFAHDVLNKMLNTKTLVAGE 109

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
              FG D+  D    +  G+KYGF    +  +       VSS+ I+  +  G     + +
Sbjct: 110 NALFGLDQV-DVNHFRSIGKKYGFTVETV-PMECINGLEVSSNTIKQTIHDGDFSKVSSM 167

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANF 244
           LG  + I   V+HG+  G   G PTAN+ ++ + L    GVY    R Q +  + G+ N 
Sbjct: 168 LGSSYLISGTVVHGKGAGHKFGMPTANISIAANKLFPPHGVYGSISRFQGENHF-GMTNI 226

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK-DIEKLKIYMGEDEK 303
           G  P+        +E+F+ +F ++IYGQ+  +    Y+R   KF   + +++  + +D K
Sbjct: 227 GLRPSDDDIPIPTIETFLLNFDRDIYGQKVFLELLVYIRGIRKFDGGLAEVRQQIDKDIK 286

Query: 304 KARKILESSYPLSE 317
           +    +E +  L +
Sbjct: 287 QIHSYIEENGNLLQ 300


>gi|196019411|ref|XP_002118972.1| hypothetical protein TRIADDRAFT_62949 [Trichoplax adhaerens]
 gi|190577479|gb|EDV18542.1| hypothetical protein TRIADDRAFT_62949 [Trichoplax adhaerens]
          Length = 214

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 4/212 (1%)

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK 161
            S   F++K+L++  +VK V+TG  F FGK+R G+   L +    YGF    ID+ + + 
Sbjct: 1   MSHGDFVEKILIKKFDVKGVVTGYNFHFGKNRLGNANFLSESSNNYGFFYEVIDKYKKDF 60

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDIL 220
            + VSSS +R  + KG V     +LG  + I   V +G+K+   LG+ TAN++L    + 
Sbjct: 61  IE-VSSSKLRELIAKGMVETVRKILGIYYFISGVVCYGKKLAGKLGYKTANIKLIKDLVY 119

Query: 221 LKEGVYAIRFRTQDQT--SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
              GVY +R   +D+   SY GVAN G  PT   N   +LE  IF+F Q+IY +   V F
Sbjct: 120 PLNGVYLVRVTVKDEKDNSYYGVANIGVKPTFSQNQERMLEVHIFEFGQDIYEKDIKVEF 179

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +LRPE +F  +E+L+  +  D   A+ +L+
Sbjct: 180 ISFLRPERQFSIVEELQSQIKRDINFAKYLLK 211


>gi|224993232|gb|ACN76303.1| RibC [Listeria innocua]
          Length = 211

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANDR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993184|gb|ACN76279.1| RibC [Listeria innocua]
 gi|224993196|gb|ACN76285.1| RibC [Listeria innocua]
 gi|224993198|gb|ACN76286.1| RibC [Listeria innocua]
 gi|224993202|gb|ACN76288.1| RibC [Listeria innocua]
 gi|224993208|gb|ACN76291.1| RibC [Listeria innocua]
 gi|224993210|gb|ACN76292.1| RibC [Listeria innocua]
 gi|224993214|gb|ACN76294.1| RibC [Listeria innocua]
 gi|224993216|gb|ACN76295.1| RibC [Listeria innocua]
 gi|224993224|gb|ACN76299.1| RibC [Listeria innocua]
 gi|224993240|gb|ACN76307.1| RibC [Listeria innocua]
 gi|224993242|gb|ACN76308.1| RibC [Listeria innocua]
          Length = 211

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993188|gb|ACN76281.1| RibC [Listeria innocua]
 gi|224993226|gb|ACN76300.1| RibC [Listeria innocua]
 gi|224993248|gb|ACN76311.1| RibC [Listeria innocua]
          Length = 211

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K G T+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGITIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993254|gb|ACN76314.1| RibC [Listeria monocytogenes]
 gi|224993256|gb|ACN76315.1| RibC [Listeria monocytogenes]
 gi|224993258|gb|ACN76316.1| RibC [Listeria monocytogenes]
 gi|224993260|gb|ACN76317.1| RibC [Listeria monocytogenes]
 gi|224993262|gb|ACN76318.1| RibC [Listeria monocytogenes]
 gi|224993284|gb|ACN76329.1| RibC [Listeria monocytogenes]
          Length = 211

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           ++++A +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKKAKQIAEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+   LV  L V+ V+ G  + +GK   G    L K  +   F    
Sbjct: 61  RFTTQFSELSPQSFVDNYLV-ALNVEHVVAGFDYSYGKKGEGKMTDLAKYADGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+ +G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
           +++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 RVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|224993236|gb|ACN76305.1| RibC [Listeria innocua]
 gi|224993244|gb|ACN76309.1| RibC [Listeria innocua]
          Length = 211

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPI--TVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K GRT+GFPTAN+
Sbjct: 119 VDK-QTVASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|261597141|gb|ACX85434.1| putative FMN adenylyltransferase [Arthrobacter sp. NyZ415]
          Length = 269

 Score =  201 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 13/237 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M +++ ++    LPN     V+++G FDG+H GH L+L +   +     +   V++F+P 
Sbjct: 19  MKIWNGLD---DLPNEPGRTVISLGCFDGVHRGHQLLLARLTKVAATKGAKSVVVTFDPL 75

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    +     +   LE  G  A++  K+T + A+  AE F+ +  V+ L  
Sbjct: 76  PAQVLYPETAPVAIMALEDRLSALEAAGVDAVLVIKYTRDIASQPAEDFVAQAFVKSLHA 135

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN--KSQIVSSSNIRTALTK 176
             V+ G   RFG+ RAG+   L+  G ++ F    + +        +  SS+  R AL+ 
Sbjct: 136 AVVVVGEDCRFGRGRAGNIDTLKGAGLRWNFDVSVMSDRTAGGVGGRRYSSTWAREALSS 195

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           G+V  A  +LG    I                 T  +     +L   G YA   R  
Sbjct: 196 GNVGIAEQILGRPHRIRMRATWAAGSW------TTKVGSVRGMLPTSGDYAGWVRIG 246


>gi|152992059|ref|YP_001357780.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Sulfurovum
           sp. NBC37-1]
 gi|151423920|dbj|BAF71423.1| riboflavin biosynthesis regulatory protein RibF [Sulfurovum sp.
           NBC37-1]
          Length = 273

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 42/312 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M + +NI              +AIG+FDG+H+ H  ++E    I       V+       
Sbjct: 1   MKIQNNIRS------------IAIGSFDGMHVAHMKVVEAVDAI------VVI------- 35

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                      L+P   +      +    +  + F     + S E F++K+  ++  ++ 
Sbjct: 36  -----ERNGGYLTPGYKR-----SLYTDKMCCFYFFDTIKSLSPEDFVEKLNEDFPRLER 85

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK++AG    L++  +K     V +DE+   +   V S  I+  L +G++ 
Sbjct: 86  IVVGYDFAFGKNKAGSATTLRELFDK---EVVIVDEIC-LEGIPVHSRTIKAYLREGNIY 141

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  LLG  ++I+  VI G+ +G+    PT N+++    L  EGVYA + +    + Y  
Sbjct: 142 MANKLLGRHYSIKGRVIPGQGLGKKALVPTLNLKVEHYQLPLEGVYATQTKI-GSSWYHS 200

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V+  G    +  +G   +E+ I D    +      + F   +R   KF  ++ LK  + +
Sbjct: 201 VSFLGHR--VSTDGSFAVETHIIDKDIGMVEGEIILEFRALIRKNRKFDTLDMLKGQIEK 258

Query: 301 DEKKARKILESS 312
           D ++A  +L  S
Sbjct: 259 DIERATALLNES 270


>gi|325847927|ref|ZP_08170098.1| putative riboflavin biosynthesis protein RibF [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480796|gb|EGC83850.1| putative riboflavin biosynthesis protein RibF [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 213

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 4/211 (1%)

Query: 102 YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK 161
            S  +FI+++L + L  K VI G  +RFGK   GD   L+K  E + + T  +D    + 
Sbjct: 1   MSPYEFIEEILYKKLNTKYVIVGDNYRFGKMAKGDIKTLKKYEEDFAYKTKVVD-FELDD 59

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-PDIL 220
            +I++S++IR  +  G +  A   LG+ F ++  VI G + GR L FPTAN++ S     
Sbjct: 60  GKIINSTDIRQMVRDGEIEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFKYTT 119

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
            K GVY  +    D+  Y  + + G NPT   N  + +E++I +FS+ IYG+  ++ F +
Sbjct: 120 AKSGVYFTKVNI-DRDFYYALTDIGTNPTF-ENKEIKIETYILNFSKNIYGKNISIEFLE 177

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           YLR + KF   ++L   M +D++  RK++E 
Sbjct: 178 YLRSDYKFNSADELIEQMEKDKETGRKLMEK 208


>gi|315927326|gb|EFV06670.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 283

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 36/314 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M++F  I       + +    +AIG FDG+HLGH   L+    +  N  + V+       
Sbjct: 1   MNIFTTI-------SKINITSLAIGCFDGMHLGH---LKLVKCLDENGALLVI------- 43

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               +      L     +E+I  K     +I   F     +     F+  +  E++ +K 
Sbjct: 44  ----NKFKGQFLCSNRQKEEISGK----KVIEVDF-ESIKSLDGRDFLSFLKKEFVNLKF 94

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK+RA +   ++      G  T+ +DE   +    V +S I+  L+K ++ 
Sbjct: 95  IVVGYDFSFGKNRAYNAKDIESLS---GIKTIIVDEFSID-GIGVHASLIKDFLSKANLQ 150

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A   LG  ++I+  +I G+ +G    F T N+      L + GVY    ++Q + +Y  
Sbjct: 151 KAKEFLGRDYSIKGKMIKGQGLGSKELFATINLDCEGYFLPQNGVYVTLLKSQ-RKTYKS 209

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           V+  G       +    +ES I +   E +  G+   + F  +LR   KF+D++KLK  +
Sbjct: 210 VSFLGVR---SSDENFAIESHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQI 266

Query: 299 GEDEKKARKILESS 312
            +D ++AR++L  +
Sbjct: 267 AKDIEQARELLRKN 280


>gi|224993206|gb|ACN76290.1| RibC [Listeria innocua]
          Length = 211

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 37  ILEQAIKIANNSPIT--VLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRY 93
           +++QA +IA    +   VL+F+PHP  ++ +    +  L+P   + + + ++G   +   
Sbjct: 1   VIKQAKQIAEEKGLQTEVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVV 60

Query: 94  KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +FT + +  S + F+ K LV  L V+ V+ G  + +GK   G    L+       F    
Sbjct: 61  RFTTQFSELSPQAFVDKYLV-ALNVEHVVAGFDYSYGKKGEGKMTELENYANGR-FEVTI 118

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANM 213
           +D+ +   S  +SS+NIR A+T+G +  A  LLGY +T +  VIHG+K G T+GFPTAN+
Sbjct: 119 VDK-QTAASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGITIGFPTANI 177

Query: 214 QLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRN 247
            ++ D L  K GVYA++FR   +T   G+A+ G N
Sbjct: 178 LVNEDYLIPKLGVYAVKFRVNGETHL-GMASIGYN 211


>gi|86149853|ref|ZP_01068082.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596869|ref|ZP_01100105.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218562240|ref|YP_002344019.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|85839671|gb|EAQ56931.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88190558|gb|EAQ94531.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359946|emb|CAL34735.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925850|gb|ADC28202.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315930611|gb|EFV09641.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 284

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH   L+    +  N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGH---LKLVKCLDENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +     F+  +  E++ +K ++ G  F FGK+RA +   
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGRDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYNAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE   +    V +S I+  L+K ++  A   LG  ++I+  +I G
Sbjct: 115 IESLS---GIKTIIVDEFSID-GIGVHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVY    ++Q + +Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYVTLLKSQ-RKTYKSVSFLGVR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELLRKN 281


>gi|167005242|ref|ZP_02271000.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 283

 Score =  198 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 36/314 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M++F  I       + +    +AIG FDG+HLGH   L+    +  N  + V+       
Sbjct: 1   MNIFTTI-------SKINITSLAIGCFDGMHLGH---LKLVKCLDENGALLVI------- 43

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               +      L     +E+I  K     +I   F     +   + F+  +  E++ +K 
Sbjct: 44  ----NKFKGQFLCSNRQKEEISGK----KVIEVDF-ENIKSLDGKDFLSFLKKEFVNLKF 94

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK+RA D   ++      G  T+ +DE        V +S I+  L+K ++ 
Sbjct: 95  IVVGYDFSFGKNRAYDAKDIESLS---GIKTIIVDEFSI-GGVGVHASLIKDFLSKANLQ 150

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A   LG  ++I+  +I G+ +G    F T N+      L + GVYA   ++Q +  Y  
Sbjct: 151 KAKEFLGRDYSIKGKMIKGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKIYKS 209

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           V+  G       +    +ES I +   E +  G+   + F  +LR   KF+D++KLK  +
Sbjct: 210 VSFLGIR---SSDENFAIESHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQI 266

Query: 299 GEDEKKARKILESS 312
            +D ++AR++L  +
Sbjct: 267 AKDIEQARELLRKN 280


>gi|157414871|ref|YP_001482127.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385835|gb|ABV52150.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315931788|gb|EFV10743.1| cytidylyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 283

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 36/314 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M++F  I       + +    +AIG FDG+HLGH   L+    +  N  + V+       
Sbjct: 1   MNIFTTI-------SKINITSLAIGCFDGMHLGH---LKLVKCLDENGALLVI------- 43

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               +      L     +E+I  K     +I   F     +   + F+  +  E++ +K 
Sbjct: 44  ----NKFKGQFLCSNRQKEEISGK----KVIEVDF-ESIKSLDGKDFLSFLKKEFVNLKF 94

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK+RA +   ++      G  T+ +DE        V +S I+  L+K ++ 
Sbjct: 95  IVVGYDFSFGKNRAYNAKDIEFLS---GIKTIIVDEFSI-GGIGVHASLIKDFLSKANLQ 150

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A   LG  ++I+  +I G+ +G    F T N+      L + GVYA   ++Q +  Y  
Sbjct: 151 KAKEFLGRDYSIKGKMIKGQGLGSKELFATINLDCKGYFLPQNGVYATLLKSQ-RKIYKS 209

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           V+  G       +    +ES I +   E +  G+   + F  +LR   KF+D++KLK  +
Sbjct: 210 VSFLGIR---SSDENFAIESHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQI 266

Query: 299 GEDEKKARKILESS 312
            +D ++A+++L  +
Sbjct: 267 AKDIEQAKELLRKN 280


>gi|157738062|ref|YP_001490746.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Arcobacter
           butzleri RM4018]
 gi|157699916|gb|ABV68076.1| bifunctional riboflavin kinase/FAD synthase RibF [Arcobacter
           butzleri RM4018]
          Length = 281

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 27/291 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+H+ H  + +       N  I  +             S    L+P S ++
Sbjct: 15  TAIAIGGFDGMHIAHQELFKNL---GENGAIVSI------------ESGFANLTPKSYRQ 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +   K                     +FI+ +  E+ +++ ++ G  F FGK+R+     
Sbjct: 60  EY-SKYPI-YYYVLD---NIKKLEGIEFIKLLKEEFPKLEKIVVGYDFCFGKNRSCSTQD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++    +    + I E++ +    V S  IR  +  G++  A  LLG  + I   +  G
Sbjct: 115 LEEL---FDGEVIIIPEIKVDN-IAVHSRTIREFIKDGNIELANKLLGKEYKIYGFLQKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G T   PT N+ +   +L KEG+Y  +    D+  YS V+  G   T   +G   +E
Sbjct: 171 QGLGTTNFVPTINLTIDEFLLPKEGIYISK-TVVDEIEYSSVSFLGHRAT--TDGNYAVE 227

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + I D + E+      + F   +R   KF   E+LK  + +D + ++    
Sbjct: 228 THILDKNIEVNNHNIQIKFIKRVRDNQKFDSFEELKKQILDDIEVSKNYFS 278


>gi|121613196|ref|YP_001000290.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87250259|gb|EAQ73217.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 284

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH   L+    +  N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGH---LKLVKCLDENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E++ +K ++ G  F FGK+RA D   
Sbjct: 60  EISGK----KVIEVDF-ENIKSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYDAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G
Sbjct: 115 IESLS---GIKTIIVDEFSI-GGVGVHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q +  Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKIYKSVSFLGIR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELLRKN 281


>gi|307747508|gb|ADN90778.1| riboflavin kinase/FAD synthase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 284

 Score =  196 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH   L+    +  N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGH---LKLVKCLDENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E++ +K ++ G  F FGK+RA +   
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYNAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G
Sbjct: 115 IEFLS---GIKTIIVDEFSI-GGIGVHASLIKDFLSKANLQKAKEFLGRDYSIKGKMIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q +  Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCKGYFLPQNGVYATLLKSQ-RKIYKSVSFLGIR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++A+++L  +
Sbjct: 227 SHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQAKELLRKN 281


>gi|308126671|ref|ZP_07663852.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ4037]
 gi|308107969|gb|EFO45509.1| riboflavin biosynthesis protein RibF [Vibrio parahaemolyticus
           AQ4037]
          Length = 174

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/173 (36%), Positives = 89/173 (51%), Gaps = 2/173 (1%)

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +LQ+ GEKYGF  V        + + VSS+ IR AL +  +  A  +LG  ++I   V H
Sbjct: 1   MLQEAGEKYGFEVVSTQSFCLQQLR-VSSTAIREALARDDLHAAQEMLGRDYSISGRVSH 59

Query: 199 GEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           G K+GRT+GFPTAN+ L   +    GVY ++          GVAN G+ PT+       L
Sbjct: 60  GRKLGRTIGFPTANIPLKRCVSPVSGVYVVQALGLGDKPVGGVANIGQRPTVNGV-RQQL 118

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           E  +FDF   +YG++  V     LR E KF+  E LK  +  D + AR  L  
Sbjct: 119 EVHLFDFHANLYGKQLEVELLHKLRDEQKFESFEALKQQIELDAEAARVWLRQ 171


>gi|315636414|ref|ZP_07891658.1| riboflavin kinase/FAD synthase RibF [Arcobacter butzleri JV22]
 gi|315479280|gb|EFU69969.1| riboflavin kinase/FAD synthase RibF [Arcobacter butzleri JV22]
          Length = 283

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 27/291 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+H+ H  + +       N  I  +             S    L+P S ++
Sbjct: 17  TAIAIGGFDGMHIAHQELFKNL---GENGAIVSI------------ESGFANLTPKSYRQ 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +   K                     +FI+ +  E+ +++ ++ G  F FGK+R+     
Sbjct: 62  EY-SKYPI-YYYVLD---NIKKLEGVEFIKLLKEEFPKLEKIVVGYDFCFGKNRSCSTQD 116

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++    +    + I E++ +    V S  IR  +  G++  A  LLG  + I   +  G
Sbjct: 117 LEEL---FDGEVIIIPEIKVDN-IAVHSRTIREFIKDGNIELANKLLGKEYKIYGFLQKG 172

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G T   PT N+ +   +L KEG+Y  +    D+  YS V+  G   T   +G   +E
Sbjct: 173 QGLGTTNFVPTINLTIDEFLLPKEGIYISK-TIVDEIEYSSVSFLGHRAT--TDGNYAVE 229

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + I D + E+      + F   +R   KF   ++LK  + +D + ++    
Sbjct: 230 THILDKNIEVNNHNIQIKFIKRVRDNQKFDSFKELKKQILDDIEVSKNYFS 280


>gi|325067091|ref|ZP_08125764.1| riboflavin biosynthesis protein RibF [Actinomyces oris K20]
          Length = 213

 Score =  195 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 15/216 (6%)

Query: 1   MHVFHNIEINQSLPNHL-----KGGVVAIGNFDGIHLGHHLILEQAIKIANN------SP 49
           M V++  E    +P  L      G VV +G FDG+H GH  +L + +++++        P
Sbjct: 1   MEVWYGAE---QVPASLSAPGGPGAVVTMGIFDGVHRGHQAVLGRVVELSHELACDGERP 57

Query: 50  ITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           + V ++F+PHPR++ Q  + +  ++  + +   L  +G  A++   +TL+ A  S + F+
Sbjct: 58  LAVAVTFDPHPRSVHQPEADLPLIASLTDRLVSLGDLGLDAVLVITYTLDFAAQSPQDFV 117

Query: 109 QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
           +  L E L  + V+ G   RFG+  +GD   L++ G + GF    +  + +++ +  SS+
Sbjct: 118 RTWLEELLGARAVVVGDDVRFGRHNSGDSATLEQIGREDGFEVEIVSTICSDEGRRWSST 177

Query: 169 NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
            IR  L  G++   + +LG    +   V+ G + GR
Sbjct: 178 WIRQCLKDGNMRQVSRVLGRPHRLRGVVVRGLRRGR 213


>gi|208434309|ref|YP_002265975.1| FMN adenylyltransferase [Helicobacter pylori G27]
 gi|208432238|gb|ACI27109.1| FMN adenylyltransferase [Helicobacter pylori G27]
          Length = 257

 Score =  195 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 30/284 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF---TLSPPSIQEKILEKMG 86
           +HLGH  + ++                  P+ ++      +    L+P   + K+     
Sbjct: 1   MHLGHQALFKELKD---------------PKALLIIEKKHYTKGYLTPLKYRAKL----- 40

Query: 87  FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
               + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D   L++R EK
Sbjct: 41  VGMPLFFVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEK 100

Query: 147 YGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
               T+ + E++  +   V S  I+ AL+ G +  A  LLG  + +  +VI  + +G   
Sbjct: 101 ----TIIVPEVKI-QEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGEVISDQGLGHKE 155

Query: 207 GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFS 266
             PT N++    IL   GVYA   R +D      V+  G    +  +    +E  + D  
Sbjct: 156 LVPTLNIKTKDFILPSFGVYASLVRIKDPIYQKSVSFIGNR--LSTDHNFAIECHVLDTI 213

Query: 267 QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            E   +   + +   +R  ++F  +++LK  + +D   A++IL 
Sbjct: 214 IENPPKEIALRWVQKIRDNMRFNSLKELKNQIQQDILIAKEILR 257


>gi|305431681|ref|ZP_07400850.1| riboflavin biosynthesis protein RibF [Campylobacter coli JV20]
 gi|304445276|gb|EFM37920.1| riboflavin biosynthesis protein RibF [Campylobacter coli JV20]
          Length = 278

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 36/311 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M++F       +L N++K   +AIG FDG+HLGH  ++E      ++S   ++       
Sbjct: 1   MNIF-----TTTLKNNIK--TLAIGCFDGVHLGHRKLIECL----DDSGALLIIDK---- 45

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +       L     +  + +K     +I   F         + F+Q +  E++ ++ 
Sbjct: 46  --FKGKK----LCTNQDKAFLAQK----EIIELDF-ENIKALDGKDFLQALKEEFVNLER 94

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK+R+     ++      G  T  IDE + +    V +S I+  LT+G + 
Sbjct: 95  IVVGFDFSFGKNRSYKAKDIEALS---GIKTTIIDEFKLD-GVGVHASLIKEYLTQGDIK 150

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A   LG  + I+  +I G+ +G    F T N++     L K GVYA      D   Y  
Sbjct: 151 KANSFLGRNYAIKGKLIKGQGLGSKELFATLNLECEEYFLPKNGVYASIVSFHD-KRYKS 209

Query: 241 VANFGRNPTMVPNGPLLLESFIFD-FSQEIY-GQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
           V+  G       +    +ES I + F + +  G+   + F ++LR   KF D+ +LK  +
Sbjct: 210 VSFVGVR---SSDMQFAIESHIIEKFDESLAIGEVLELEFVEFLRENQKFNDLAQLKEQI 266

Query: 299 GEDEKKARKIL 309
            +D  +A++ L
Sbjct: 267 SKDINQAKECL 277


>gi|86151544|ref|ZP_01069758.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153430|ref|ZP_01071634.1| riboflavin kinase/FAD synthase RibF [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|148925948|ref|ZP_01809635.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|205355439|ref|ZP_03222210.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315124108|ref|YP_004066112.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85841173|gb|EAQ58421.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843156|gb|EAQ60367.1| riboflavin kinase/FAD synthase RibF [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|145844934|gb|EDK22038.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|205346673|gb|EDZ33305.1| putative riboflavin kinase/FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315017830|gb|ADT65923.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 284

 Score =  194 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH  +++       N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGHLKLVKYL---DENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E+  +K ++ G  F FGK+RA     
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGKDFLSFLKKEFTSLKFIVVGYDFSFGKNRAYSAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L++ ++  A   LG  ++I+  VI G
Sbjct: 115 IEFLS---GIKTIIVDEFSI-GGIGVHASLIKDFLSRANLQKAKEFLGRNYSIKGKVIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q + +Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKTYKSVSFLGVR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELLRKN 281


>gi|296273829|ref|YP_003656460.1| riboflavin biosynthesis protein RibF [Arcobacter nitrofigilis DSM
           7299]
 gi|296098003|gb|ADG93953.1| riboflavin biosynthesis protein RibF [Arcobacter nitrofigilis DSM
           7299]
          Length = 275

 Score =  194 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 27/290 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+H+ H  +         N  I  +             +    ++P   +E
Sbjct: 9   TSIAIGGFDGMHIAHQSLFNNLTS---NGAIIAI------------ETGHANMTPKEQRE 53

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K       +  I Y    +  N S ++FI+ +  E+ ++K ++ G  F FGK+RA     
Sbjct: 54  KCT-----TFPIFYYELNDIKNLSGKEFIKLLKSEFPKLKKIVVGFDFCFGKNRANSTEE 108

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+     +    V ++E+  N    + S  IR  +  G    A  LLG ++ I+   I G
Sbjct: 109 LKSL---FDGEVVVVNEISIND-IAIHSRIIREYIKNGDFETANTLLGRKYEIKGTQIKG 164

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G++   PT N+ +   +L  EGVY  + +  D  SY  ++  G   T   +G   +E
Sbjct: 165 QGLGKSDFVPTINLDIKEYLLPNEGVYITKTKV-DNVSYPSISFLGHRVT--TDGNFAVE 221

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + I +     +    ++ FF  LR   KF   EKLK  +  D    +   
Sbjct: 222 THILNKDISAHNSNISIKFFKKLRDNQKFDSFEKLKEQIVNDINDCKIYF 271


>gi|57168172|ref|ZP_00367311.1| riboflavin biosynthesis protein RibF [Campylobacter coli RM2228]
 gi|57020546|gb|EAL57215.1| riboflavin biosynthesis protein RibF [Campylobacter coli RM2228]
          Length = 290

 Score =  194 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 29/290 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  ++E      ++S   ++          +       L     +  +
Sbjct: 27  LAIGCFDGVHLGHRKLIECL----DDSGALLIIDK------FKGKK----LCTNQDKAFL 72

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            +K     +I   F         + F+Q +  E++ ++ ++ G  F FGK+R+     ++
Sbjct: 73  AQK----EIIELDF-ENIKALDGKDFLQALKEEFVNLERIVVGFDFSFGKNRSYKAKDIE 127

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                 G  T  IDE + +    V +S I+  LT+G +  A   LG  + I+  +I G+ 
Sbjct: 128 ALS---GIKTTIIDEFKLD-GVGVHASLIKEYLTQGDIKKANSFLGRNYAIKGKLIKGQG 183

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G    F T N++     L K GVYA      D   Y  V+  G       +    +ES 
Sbjct: 184 LGSKELFATLNLECEEYFLPKNGVYASIVSFHD-KRYKSVSFVGVR---SSDMQFAIESH 239

Query: 262 IFD-FSQEIY-GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           I + F + +  G+   + F ++LR   KF D+ +LK  + +D  +A++ L
Sbjct: 240 IIEKFDESLAIGEVLELEFVEFLRENQKFNDLAQLKEQISKDINQAKECL 289


>gi|283956001|ref|ZP_06373490.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|283792477|gb|EFC31257.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 1336]
          Length = 284

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDGIHLGH   L+    +  N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGIHLGH---LKLVKCLDENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E++ +K ++ G  F FGK+RA     
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGKDFLSFLKKEFINLKFIVVGYDFSFGKNRAYSAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L+K ++  A   LG  ++I+  +I G
Sbjct: 115 IESLS---GIKTIIVDEFSI-GGVGVHASLIKDFLSKANLQKAKEFLGRDYSIKGKLIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q +  Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCKGYFLPQNGVYATLLKSQ-KNIYKSVSFLGVR---SSDENFAIE 226

Query: 260 SFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E + Q     + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGENFTQEEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELLRKN 281


>gi|206896362|ref|YP_002247270.1| riboflavin biosynthesis protein RibF, putative [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738979|gb|ACI18057.1| riboflavin biosynthesis protein RibF, putative [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 337

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 20/301 (6%)

Query: 21  VVAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           VV I  G F+ IHLGH  +L     + +     VL+F P P+  +  S     +     +
Sbjct: 34  VVTIVFGGFESIHLGHRRLLSHVSGVNDGG---VLTFEPLPKEALGYSES--RVLTDDER 88

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
               E MG + +I+  F  +  +   E F+ + L +   V+T++ G  FRFG++  GD  
Sbjct: 89  LCAFESMGINQIIKLPF-EKIKDLEPETFLSRYLED---VQTIVVGENFRFGRNAVGDIS 144

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L++   +     + ++ L +   +IVS+  I+  +  G++  A  LLGY + I    +H
Sbjct: 145 LLKQ-WCQLNRKNLIVEPLVSVDGEIVSTKAIKNYIHHGNMERAMKLLGYPYFIRGPRVH 203

Query: 199 GEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G +IG  +G PT N+  S        GVY   F   +Q S   +A+FG+ PT      +L
Sbjct: 204 GNRIGSKIGVPTVNLHWSKQKTRPPYGVYDG-FLLSNQWSGPALASFGKAPTF-DRKDVL 261

Query: 258 LESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           LE ++      I  G+     F  ++R E KF D   L   + EDE      L    PL 
Sbjct: 262 LEIYVPGIDLNIGAGEIVLYGFHRFVREEKKFPDATSLVQQIREDEND----LAKDAPLI 317

Query: 317 E 317
           E
Sbjct: 318 E 318


>gi|152990875|ref|YP_001356597.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Nitratiruptor sp. SB155-2]
 gi|151422736|dbj|BAF70240.1| riboflavin biosynthesis regulatory protein RibF [Nitratiruptor sp.
           SB155-2]
          Length = 263

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/289 (22%), Positives = 116/289 (40%), Gaps = 31/289 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+H GH  + ++      N  + V+                  L+P   +   
Sbjct: 1   MAIGAFDGMHRGHQALFQKLSL---NGAVAVI------------DKGYAVLTPGYERC-- 43

Query: 82  LEKMGFSALIRYKF--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
                        F    +  +  A+ F+  +   +  ++ V+ G  F FGKDR      
Sbjct: 44  -----IHTSYPCYFFPLQKIRHLDAKGFLDLLQKRFPSLQRVVVGYDFAFGKDRKYGIDD 98

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K    +    + ++E++ +    V S  I+  L  G +  A  +LG  ++I   V  G
Sbjct: 99  LEKL---FHGEVIVVEEVQID-GIAVHSRTIKELLRHGDIRMANRMLGRTYSIAGSVQKG 154

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             +G+     T N+++   +L KEGVYA          +  V   G+  ++  +G   +E
Sbjct: 155 LGLGKKKLVATLNLKIKDFLLPKEGVYATWS-GLGGEIFPSVTFIGKRESV--DGSFSIE 211

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           + I D   +   +   + F  +LR   KF     LK  +  D + A++I
Sbjct: 212 THIIDKKIDYPVEAVRIYFVQFLRENRKFDSFTSLKRQIESDIRMAKEI 260


>gi|153951303|ref|YP_001398172.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938749|gb|ABS43490.1| putative riboflavin biosynthesis protein RibF [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 284

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +A+G FDG+HLGH   L+    +  N  + V+           +      L     +E
Sbjct: 14  TSLAMGCFDGMHLGH---LKLVKCLDENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E++ +K ++ G  F FGK+RA     
Sbjct: 60  EISGK----KVIELDF-ESIKSLDGKDFLSFLKKEFVNLKFIVVGYDFSFGKNRAYSAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L+K ++ NA   LG  ++I+  +I+G
Sbjct: 115 IESLS---GIKTIIVDEFSI-GGIGVHASLIKDFLSKANLQNAKEFLGRNYSIKGKLING 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q +  Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKIYKSVSFLGIR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELLRKN 281


>gi|57238215|ref|YP_178704.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter jejuni RM1221]
 gi|57167019|gb|AAW35798.1| riboflavin biosynthesis protein RibF, putative [Campylobacter
           jejuni RM1221]
 gi|315058003|gb|ADT72332.1| Riboflavin kinase / FMN adenylyltransferase [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 284

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH  +++       N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGHLKLVKYL---DENGALLVI-----------NKFKGQFLCSNRQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E+  +K ++ G  F FGK+RA     
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGKDFLSFLKKEFTSLKFIVVGYDFSFGKNRAYSAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L++ ++      LG  ++I+  VI G
Sbjct: 115 IEFLS---GIKTIIVDEFSI-GGIGVHASLIKDFLSRANLQKVKEFLGRNYSIKGKVIKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q + +Y  V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKTYKSVSFLGVR---SSDENFAIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +  G+   + F  +LR   KF+D++KLK  + +D ++AR++L  +
Sbjct: 227 SHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARELLRKN 281


>gi|229088442|ref|ZP_04220196.1| Cytidyltransferase-related domain [Bacillus cereus Rock3-44]
 gi|228694879|gb|EEL48101.1| Cytidyltransferase-related domain [Bacillus cereus Rock3-44]
          Length = 297

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 13/286 (4%)

Query: 1   MH-VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNP 57
           M  V+    I++++ +  +  V+A+G FDG+H+GH  +++ A +IA      + V++F P
Sbjct: 1   MKTVYIQHPISKTVRDETEECVLALGFFDGVHIGHKQLIQTAKEIARQKKMTLAVMTFYP 60

Query: 58  HPR-TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HPR  +  + +P+  L+P +++E+  + MG   LI  KF    A  S E+F++  ++ + 
Sbjct: 61  HPRDIVHSTQNPMKYLTPLTVKEERFKNMGVEKLIVVKFDSAFARLSYEEFVKTYIIGF- 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             + VI G  + +G    G+  +L+++G    F    I ++  +  + +SS+ IR  L  
Sbjct: 120 RCRHVIAGFDYHYGYMGQGNMQLLKEQGRNQ-FAVTTIPKI-EHDHEKISSTAIRNLLKV 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G V      L   + +   V        T  F    +     +L   GVY I    ++  
Sbjct: 178 GLVHAVPKYLDDYYEVRGKVEKSSSFYETYQFLEI-LVDKDYMLPASGVYRIEVEIENDI 236

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
            Y GV       +   +   LL   + + + +  G+R  V +  Y+
Sbjct: 237 -YEGVCQ---QVSQQGDRQALL-IQLSNCTVQTCGKRLKVRWIQYI 277


>gi|322378447|ref|ZP_08052900.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS1]
 gi|322380354|ref|ZP_08054562.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS5]
 gi|321147224|gb|EFX41916.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS5]
 gi|321149138|gb|EFX43585.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter suis HS1]
          Length = 286

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 21/291 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           ++IG FDG+H+ H  +L+            VL        ++  ++    L+P   ++ +
Sbjct: 16  LSIGKFDGVHVAHQHLLQAL-----GPQSAVL--------VVDKTNLKEALTPLDYRQHL 62

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L+K     +               +F++ +  ++  ++ ++ G  FRFG  R G+   L+
Sbjct: 63  LKKW-VDQVYFLALEEAFL-LEPPEFVRLIESKFSCLQKIVVGYDFRFGHKRMGNVDTLK 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                       I E++  K   + + +I+  + KG +  A   LG+ F +E  +I G+ 
Sbjct: 121 TLLNPK-ITLEVIPEIKI-KGISLHAYHIKECIKKGDISLACQFLGHPFMLEGPIISGQG 178

Query: 202 IGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +G    +PT NM ++P++LL   GVYA   +  + +    V+  G    +  +G + LE+
Sbjct: 179 LGHQKLYPTLNMAINPEMLLPSFGVYATHVKFLE-SYLPSVSFLGNR--LSTDGKIALET 235

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            I + S         V F   +R    F ++  LK  +  D ++A+ IL++
Sbjct: 236 HILNTSLSTPPPSMRVFFVQKIRDNALFDNLNSLKHQISLDLQEAKHILKA 286


>gi|213613334|ref|ZP_03371160.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 165

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1   MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  +  +      L+    +   L + G   ++  KF    A  +A+ FI ++LVE L V
Sbjct: 58  PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKFDRRFAALTAQTFISELLVERLGV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSS 167
           + +  G  FRFG  RAGD  +LQK G +YGF               +SS
Sbjct: 118 QFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISS 165


>gi|13507897|ref|NP_109846.1| riboflavin kinase (flavokinase)/FMN adenylyltransferase (FAD
           pyrophosphorylase) (FAD synthetase); bifunctional
           [Mycoplasma pneumoniae M129]
 gi|2500206|sp|P75587|RIBF_MYCPN RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|1674379|gb|AAB96321.1| riboflavin kinase/FMN adenylyltransferase [Mycoplasma pneumoniae
           M129]
 gi|301633510|gb|ADK87064.1| riboflavin biosynthesis protein RibF [Mycoplasma pneumoniae FH]
          Length = 269

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 30/294 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDG+H GH L+ + A       P+  L     P   +QS      L  P  ++  
Sbjct: 5   LIIGAFDGLHKGHQLLAQAAS-----GPVVALLIANIPS--LQSD----WLYEPKQRQVQ 53

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L++      + + + +   N SA+ F  ++ +  L  + ++ G  F FGKD   +   L+
Sbjct: 54  LQQH--FQSVVHSYDVIEHNISAQAFFDQI-ISPLRCQQLVVGADFCFGKDNQ-NADFLR 109

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +       +T  I +     SQ +SSS IR  L +G +  A  +L   +  E  VI G +
Sbjct: 110 RLFP----NTTIIPK----DSQTLSSSTIRQWLKQGQIEQANAVLLEPYFREGVVIRGNQ 161

Query: 202 IGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
             R LG+PTAN+ L P ++    G Y +   T  QT+Y GV           N  L+ E+
Sbjct: 162 QARFLGWPTANITLKPYMVPLRCGSY-VITVTYHQTNYPGVGFISYK-----NDQLVCET 215

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
            +  FS ++YG++   +F  ++RP+ KF  ++ L+  +  D K+A+K    S  
Sbjct: 216 HLIGFSGDLYGKQLRFTFNQFIRPQQKFSGVQALQKAISGDLKQAQKWFAQSTN 269


>gi|282850807|ref|ZP_06260181.1| putative riboflavin biosynthesis protein RibF [Lactobacillus
           gasseri 224-1]
 gi|282557759|gb|EFB63347.1| putative riboflavin biosynthesis protein RibF [Lactobacillus
           gasseri 224-1]
          Length = 199

 Score =  188 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+  TV+ G  + +G     +   L K     G   + ++  ++     V S+ IR A+
Sbjct: 2   KLKADTVVVGFDYTYGPKDIANVENLPKF--AQGRFQIMVEPKQSIDKIKVGSTYIRKAI 59

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP-DILLKEGVYAIRFRTQ 233
             G+V  AA LLG  +     ++HG + G  +GFPTAN+++S   +L  EGVYA R +  
Sbjct: 60  QHGNVELAAALLGQPYETSGIIVHGFRRGHKIGFPTANLEISGAKVLPAEGVYATRAKIN 119

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
               +  + + G N T   N  L +E+ IF+F +E YG+  T+S++ ++R   KF  IE+
Sbjct: 120 G-KWHDAMTSVGYNETFKTNHGLTIETNIFNFDEEAYGKPLTLSWYKFIRSNKKFSGIEE 178

Query: 294 LKIYMGEDEKKARKIL 309
           L   + +D++  ++  
Sbjct: 179 LSRQLDQDKRNIKQYF 194


>gi|152974777|ref|YP_001374294.1| cytidyltransferase-like protein [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023529|gb|ABS21299.1| cytidyltransferase-related domain [Bacillus cytotoxicus NVH 391-98]
          Length = 288

 Score =  188 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 8/237 (3%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS- 65
           I+++L    +  V+A+G FDG+H+GH  ++  A +IAN   I   V++F PHP+ ++   
Sbjct: 5   ISKTLREETEECVLALGFFDGVHIGHRKLIRTAKEIANQKKITFAVMTFYPHPKEVVSPS 64

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
             P+  L+P  ++E+  + MG   LI  KF    A  S ++F++  ++ +   K V+ G 
Sbjct: 65  DGPMKYLTPLKVKEERFKNMGVEKLIVVKFDPVFARLSNQEFVETYIIGFC-CKHVVAGF 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            + +G    G+  +L++   +  F    I ++  ++   +SS+ IR  L+ G   +  + 
Sbjct: 124 DYHYGYKGRGNMQLLKE-QGQNKFEVTTIPKI-EHRHHKISSTAIRKLLSHGATHDIPNY 181

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           LG  + I   V        T  F    ++    +L   GVY I     DQ  Y GV 
Sbjct: 182 LGDYYEIRGIVQKSSLFYETYRFIEVFVEQD-YMLPVPGVYHIVVEI-DQIFYKGVC 236


>gi|219883352|ref|YP_002478513.1| FMN adenylyltransferase [Arthrobacter chlorophenolicus A6]
 gi|219862197|gb|ACL42537.1| FMN adenylyltransferase [Arthrobacter chlorophenolicus A6]
          Length = 279

 Score =  188 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 15/263 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
           M +++++E    +P      VV++G FDG+H GH L+L + +     N +   V++F+P 
Sbjct: 1   MKIWNSLE---DVPAETGQTVVSLGCFDGVHRGHQLLLARLLNAAETNAAKSVVVTFDPL 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P  ++   +    +     +   LE  G  A++  ++T + A  +AE F++KV V+ L  
Sbjct: 58  PAQLLYPETAPLAVMALEDRLAALEVEGVDAVLVIRYTRDVAAQAAEVFVEKVFVKTLHA 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK--SQIVSSSNIRTALTK 176
             V+ G   RFG+ RAG+   L+  G ++ F    + +        +  SS+ +R  L+ 
Sbjct: 118 AAVVVGEDCRFGQGRAGNIETLRAAGLRWSFDVSVLGDRTAGGTEGRRYSSTWVREVLSS 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           G V  A  +LG    I  +V       RT        +    +L   G YA   R     
Sbjct: 178 GDVGIAEQILGRPHRIRMEVTRAAGSWRTKA------RAVQGMLPASGDYAGWARVGSGE 231

Query: 237 SYSGVANFGRNPTMVPNGPLLLE 259
               +    R  ++  +  + +E
Sbjct: 232 RIPAIIRIPRRASLATD--ITVE 252


>gi|154148098|ref|YP_001406574.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter hominis ATCC BAA-381]
 gi|153804107|gb|ABS51114.1| riboflavin biosynthesis protein RibF [Campylobacter hominis ATCC
           BAA-381]
          Length = 282

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 30/286 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIGNFDGIH  H +++++  +   N  + V+             +    L+P   +E  
Sbjct: 15  IAIGNFDGIHKAHQVLIKKLSE---NGAVVVIL------------NENKNLTPYKFRE-- 57

Query: 82  LEKMGFSALIRYKFTLE-TANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                FS L    F L    N S  +F+  +  ++  +  ++ G  FRFGKDRA D   L
Sbjct: 58  ----NFSNLPFIYFELNTLRNLSGGEFLDFLSEKFPHLNKIVVGYDFRFGKDRAFDTNFL 113

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   + +      + E +  +   V SS I+  L KG + NA   LG  + I  +++ G+
Sbjct: 114 R---KNFSGEVYVMPEFKI-EGIGVHSSLIKDFLDKGELENAKKFLGRDYEISGEIVKGQ 169

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            +G+     T N+      L K GVY+      +      V+  G   +   +G   +E+
Sbjct: 170 GLGKVSLVATLNILADNFYLPKNGVYSSFCSLDNSAWQKSVSFIGVRES--TDGNFAIET 227

Query: 261 FIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            I  +FS + Y + C + F  +LR   KF D+  LK  + ED + A
Sbjct: 228 HILENFSDKNY-KNCRIKFIKFLRENRKFSDLNALKSQISEDIQNA 272


>gi|254459016|ref|ZP_05072439.1| riboflavin kinase [Campylobacterales bacterium GD 1]
 gi|207084287|gb|EDZ61576.1| riboflavin kinase [Campylobacterales bacterium GD 1]
          Length = 273

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/292 (23%), Positives = 123/292 (42%), Gaps = 28/292 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+H+GH  +     ++  +  I V+             +    ++P   +E
Sbjct: 5   TAIAIGGFDGMHIGHQHLFA---ELGEHGTIVVI------------ETGYANITPKEERE 49

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
                     L       E  +   + FI  +  E+ ++K ++ G  F FGKDR      
Sbjct: 50  N-FSHYPILYLEL----DEIRHLDGDAFISLLKSEFPKLKKIVVGYDFHFGKDRKYSFED 104

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+     +      ++E+   +   + S  IR  +  G +  A   LG+ +TI   ++ G
Sbjct: 105 LKTL---FSGEVKVVEEV-TLEGDSIHSHKIRAKVKIGDIKGANDFLGHNYTIMGALVAG 160

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLL 258
           + IG+     T N++ +  +  KEGVY    R  D+  Y   V+  G   T   +G   +
Sbjct: 161 QGIGKKELVATINIEATGFLTPKEGVYVTLTRIDDEEHYHPSVSFVGHRVT--TDGSFAI 218

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           ES I D  + I  ++  +SF  ++R   KF  I +LK  +  D   A + L+
Sbjct: 219 ESHILD-GEVICNKKARISFVSFIRDNKKFDSIAELKKAIKSDINIASQKLK 269


>gi|313681946|ref|YP_004059684.1| riboflavin biosynthesis protein ribf [Sulfuricurvum kujiense DSM
           16994]
 gi|313154806|gb|ADR33484.1| riboflavin biosynthesis protein RibF [Sulfuricurvum kujiense DSM
           16994]
          Length = 275

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 28/290 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +AIG FDG+H GH  +     ++  N  I V+             +    L+P   +E 
Sbjct: 8   AIAIGGFDGMHAGHQKLFN---ELGKNGAIVVI------------ETGYANLTPGREREH 52

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                     I Y    +  +   E+F+  +   +  ++ ++ G  F FGK+R      L
Sbjct: 53  YTH-----YPILYYSLDDIRHLEGEEFVALLKERFPHLRKIVVGYDFHFGKNRRYSHANL 107

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
            +    +      ID++       V S  IR+ +  G +  A   LG+ + I+  VI G+
Sbjct: 108 GEL---FSGEVKVIDQVCIEND-SVHSHKIRSKIQIGDLSGANRFLGHNYAIKGTVIKGQ 163

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPLLLE 259
            IG+T   PT N++    +L  EGVYA   R   +  Y   V   G   T   +G   +E
Sbjct: 164 GIGKTDLVPTINLECPGYLLPYEGVYAAFVRLDSEEHYHPCVVFVGHRVT--TDGSYAVE 221

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             + D +     +R ++SF  +LR   KF+ +E LK  + +D   AR+ L
Sbjct: 222 CHVLDENIPSC-ERASISFVKFLRKNQKFESLESLKKAISDDILNARREL 270


>gi|224373027|ref|YP_002607399.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Nautilia
           profundicola AmH]
 gi|223588523|gb|ACM92259.1| riboflavin biosynthesis protein RibF [Nautilia profundicola AmH]
          Length = 255

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 45/292 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
            AIG FDG+HLGH  +++       +  + V+                  L+P S +   
Sbjct: 3   AAIGGFDGMHLGHQALIK------RSDMLVVI-------------EKGSNLTPGSDR--- 40

Query: 82  LEKMGFSALIRYKFTL-ETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                ++ L    F L +  + S  +FI  +  + L +  ++ G  FRFGK+R+GD  +L
Sbjct: 41  ---CDYTNLPCKFFDLNDIKDLSPIEFIAIL--KELNITKIVVGKDFRFGKNRSGDLDLL 95

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
               E      V ID         V S  IR  +  G +  A   LG+ + I+   I G+
Sbjct: 96  NNHFEIDAIEEVKID------GIGVHSRIIREFIKNGEITKANRFLGHTYKIKGKQIKGQ 149

Query: 201 KIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
            +G     PT N+ L    ++ K+GVY           +  +   G   T   +G   +E
Sbjct: 150 GLGGKELVPTININLLKNYLIPKQGVYITLT-----NKHPSLTFVGTRST---DGNFSIE 201

Query: 260 SFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           + I   + E+  +     + F +YLR   KF +++ LK  + +D  KA +  
Sbjct: 202 THILTKNMELKIETDIFKIEFLEYLRENKKFNNLKDLKKQIRQDILKATQFF 253


>gi|26554380|ref|NP_758314.1| riboflavin kinase-FAD synthetase [Mycoplasma penetrans HF-2]
 gi|26454390|dbj|BAC44718.1| riboflavin kinase-FAD synthetase [Mycoplasma penetrans HF-2]
          Length = 289

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 32/312 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGV-VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           M +   I+IN    N ++    + +G+F+ IH GHH + ++    +       L F  +P
Sbjct: 1   MKI---IKINLPFNNQIENTENLVLGHFNLIHYGHHELFKELKNFS------FLIFENNP 51

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
               +  S          + + L K     +  Y       N  A+ FI++VL+  ++ K
Sbjct: 52  SKFKRPYS-------LDERIENLSKFNPEYIFVYDILKN--NIDADVFIKEVLL-KIKPK 101

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G+ F FGK++ G+  +L+       F+   I      K++  SS NI   +  G +
Sbjct: 102 NIVVGSDFCFGKNKKGNVELLKSF-----FNLKEI-----YKNEFYSSRNIIELIESGFL 151

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  ++ + F   + VI G+ +   L  PTAN++ + DI +  G Y       D   Y 
Sbjct: 152 EKANEMMMFNFYYSNVVIKGKGLASELDVPTANIEDNKDIKIPSGSY-SSITLIDDKLYK 210

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            ++  G  P    N    +E+ IFDF+Q+IY ++  +    ++RP  KF DI+ L  ++ 
Sbjct: 211 SISFIGI-PKSFENTKPTVETHIFDFNQDIYNKKIKIYPIKFIRPNQKFDDIKTLIKFIK 269

Query: 300 EDEKKARKILES 311
            D   A+K L  
Sbjct: 270 NDCDIAKKFLSD 281


>gi|307720807|ref|YP_003891947.1| riboflavin biosynthesis protein RibF [Sulfurimonas autotrophica DSM
           16294]
 gi|306978900|gb|ADN08935.1| riboflavin biosynthesis protein RibF [Sulfurimonas autotrophica DSM
           16294]
          Length = 273

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 28/294 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K   ++IG FDG+H+GH  + ++     +   I V+             +    L+P   
Sbjct: 3   KTTTISIGGFDGMHIGHQALFDKL---DDKGTIVVI------------ETGYANLTPDRF 47

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +E+       +  I Y    +  +  A+ F+  + V++ ++K ++ G  F FGKDR    
Sbjct: 48  RERYT-----THRIVYLKLDDIRHLDAKGFVNLLKVKFPKLKKIVVGYDFHFGKDRKYSY 102

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
             L+   +              + +  V S  IR  L  G +  A   LG+ + +    I
Sbjct: 103 DDLKNIFKGEVVVVEE----VKHNNDSVHSHKIRAKLQIGDIKGANEFLGHNYMVVGKRI 158

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY-SGVANFGRNPTMVPNGPL 256
            G+ +G    F T N+ +   +L KEGVYA   R  D+  Y   V+  G    +  +G  
Sbjct: 159 DGQGLGSKELFATINLDVKDFLLPKEGVYATLTRIDDEEHYHPSVSFIGHR--VSTDGTF 216

Query: 257 LLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +ES I D       +   +SF D++R   KF  I++LK  + +D  KA K L+
Sbjct: 217 AVESHILDGELTCKDK-AEISFVDFIRNNEKFDSIQELKEAIKKDIAKAGKELK 269


>gi|196229766|ref|ZP_03128630.1| Riboflavin kinase [Chthoniobacter flavus Ellin428]
 gi|196226092|gb|EDY20598.1| Riboflavin kinase [Chthoniobacter flavus Ellin428]
          Length = 168

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 3/164 (1%)

Query: 147 YGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +GF  V +  ++    +IVSS+ IR A+  G +  AA LLG  FTI   V+ G+++GR L
Sbjct: 3   FGFSEVGVPAVKIGD-EIVSSTLIRAAVEDGDLARAAKLLGREFTILGTVVEGDRLGRKL 61

Query: 207 GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVP-NGPLLLESFIFDF 265
           GFPTAN+    +     GVYA++ R  D     GVAN G  PT+    G  LLE  +FDF
Sbjct: 62  GFPTANLSAHNEQYPPNGVYAVQARRGD-RMLPGVANIGVRPTVKNAGGERLLEVHLFDF 120

Query: 266 SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            +EIYG+   ++F  +LRPE KF  ++ L+  + +D  +AR  L
Sbjct: 121 QEEIYGEDLEITFRKFLRPEQKFSGLDALREQIQKDAAQARLFL 164


>gi|167835734|ref|ZP_02462617.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 174

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 6/178 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VF  +   +S         + IGNFDG+H GH  +L +    A+    P+ V++F PH
Sbjct: 1   MKVFRGLPNAES----RAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR     +S    ++    + + L + G   ++   F    A+ S E F+++ LV  L  
Sbjct: 57  PREFFNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHT 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           + ++ G  F +G  RAG+   L+  GE++GF    ++ L +     +SSS +R AL  
Sbjct: 117 RWIMVGDDFCYGAKRAGNFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAA 174


>gi|224436534|ref|ZP_03657543.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter cinaedi CCUG 18818]
 gi|313143037|ref|ZP_07805230.1| riboflavin kinase/FAD synthase RibF [Helicobacter cinaedi CCUG
           18818]
 gi|313128068|gb|EFR45685.1| riboflavin kinase/FAD synthase RibF [Helicobacter cinaedi CCUG
           18818]
          Length = 288

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/310 (23%), Positives = 140/310 (45%), Gaps = 33/310 (10%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           ++   S+P   +   + +G FDG+HL H  + +   +                  ++   
Sbjct: 1   MKSFLSMPEDRRITHLVLGKFDGMHLAHKELFKHLGESG---------------AVLCIE 45

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           S    L+    +E   +K     +I  +F+ +   ++   F++K+  ++  ++ ++ G  
Sbjct: 46  SGGELLTL--DKELYCDK----EMIFVEFS-DIKEWNGAYFVKKLKEKFRALEKLVVGYD 98

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FGK+RA +   L      +G   + + E    K Q+V SS I+ A+ +G + NA  LL
Sbjct: 99  FCFGKNRAWNAEDLADL---FGGEVIIVPEFCI-KDQVVHSSVIKQAIKQGDMKNAKALL 154

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G  + I+  V+ G+ +G T  + T N++ S  +L + GVYA   + Q++  Y  V   G 
Sbjct: 155 GRYYHIQGRVVKGQNLGSTQLYATINIETSRYVLPQNGVYASFTKLQNRI-YKSVCFVGH 213

Query: 247 NPTMVPNGPLLLESFIFDFS----QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
              +  +G   +E+ I D        I      V F + +R    F D+ +LK  + +D 
Sbjct: 214 R--LSTDGAFSIETHIIDKDFVAEDRISVDSVNVCFIEKIRDNRTFSDLGELKSRIAKDI 271

Query: 303 KKARKILESS 312
            +A  IL+S+
Sbjct: 272 SQAHYILDSA 281


>gi|8574528|gb|AAF77614.1|AF151719_1 RibC-like protein [Streptococcus thermophilus]
          Length = 187

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 8/191 (4%)

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + ++ G  ++FG  R  D   L    ++    TV + E + +  + +SS+ +R  + +G+
Sbjct: 1   QEIVVGFDYKFGHHRT-DTDYL----DRNFSGTVHVIEEQQSGGEKISSTRVRQLIREGN 55

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ-LSPDILLKEGVYAIRFRTQDQTS 237
           V  A +LLG+ F+    V+HG+  GRT+GFPTAN+  +   IL  +GVY +     D   
Sbjct: 56  VKEANNLLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTILPADGVY-VADVVIDGKR 114

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           Y  + + G+N T      L LE+ IFDF  +IYG+   V + DY+R  IKF +I++L   
Sbjct: 115 YRSMTSLGKNVTF-GGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCDQ 173

Query: 298 MGEDEKKARKI 308
           +  D+K A   
Sbjct: 174 LKADKKIAENF 184


>gi|73541272|ref|YP_295792.1| FMN adenylyltransferase [Ralstonia eutropha JMP134]
 gi|72118685|gb|AAZ60948.1| FMN adenylyltransferase [Ralstonia eutropha JMP134]
          Length = 278

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 17/254 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M V       Q+ P  L   VV+IG FDG+H GH  +L            P  +L+F+PH
Sbjct: 1   MQVTR-----QAGPLRLAASVVSIGTFDGVHCGHRAVLAALRASGRALGLPTVLLTFDPH 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           PR  +Q  S    +S    +  +L + G     +   F    +  SA+ F++ +L+  L 
Sbjct: 56  PRAFLQPQSAPRMISTVDDRIALLAESGAVDHCLVLPFDRALSEASADDFVRGLLLARLG 115

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK---SQIVSSSNIRTAL 174
           ++ ++ G  FR G+ R GD   L + G+ + +    +     N        SS+  R  +
Sbjct: 116 MRRLVVGANFRCGRGRQGDIDYLGQLGKSHRYDVESVALHATNATGMDVRCSSTEARRLI 175

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVY--AIRFR 231
             G V  AA LL     I + V+       +     A + L   I +   G Y  A+R R
Sbjct: 176 QSGDVRAAAALLERPHEIHAMVVAKAPARAS---GAAEICLPHGICVPPVGQYAGAVRTR 232

Query: 232 TQDQTSYSGVANFG 245
           T        +   G
Sbjct: 233 TGGPQWRPALVQLG 246


>gi|283954131|ref|ZP_06371656.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794410|gb|EFC33154.1| putative riboflavin kinase /FMN adenylyltransferase [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 284

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 29/295 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+HLGH  +++       N  + V+           +      L     +E
Sbjct: 14  TSLAIGCFDGMHLGHLKLIKCL---DENGVLLVI-----------NKFKGQFLCSNHQKE 59

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +I  K     +I   F     +   + F+  +  E++ +K ++ G  F FGK+RA +   
Sbjct: 60  EISGK----KVIEVDF-ESIKSLDGKDFLNFLKKEFINLKFIVVGYDFSFGKNRAYNAKD 114

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           ++      G  T+ +DE        V +S I+  L K ++  A   LG  ++I+  V+ G
Sbjct: 115 IEPLS---GIKTIIVDEFSI-GGTGVHASLIKNFLVKANLQKAKEFLGRNYSIKGKVVKG 170

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           + +G    F T N+      L + GVYA   ++Q +     V+  G       +    +E
Sbjct: 171 QGLGSKELFATINLDCEGYFLPQNGVYATLLKSQ-RKICKSVSFLGIR---SSDENFSIE 226

Query: 260 SFIFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           S I +   E +   +   + F  +LR   KF+D++KLK  + +D K+A+ +L  S
Sbjct: 227 SHILEKLDENFMQEEFLELEFIAFLRENQKFQDLKKLKSKIVKDIKQAQNLLRKS 281


>gi|222823681|ref|YP_002575255.1| riboflavin kinase/FAD synthase [Campylobacter lari RM2100]
 gi|222538903|gb|ACM64004.1| riboflavin kinase/FAD synthase [Campylobacter lari RM2100]
          Length = 280

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 30/307 (9%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +    +     K   +AIG FDG+HLGH  + +       N  +            I + 
Sbjct: 1   MWNFSTPIEKTKITSLAIGCFDGMHLGHLELFKHL---DKNGAL-----------FIIAK 46

Query: 67  SPIFTLSPPSIQEKILEKMGFSA-LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                L+P   +  +         LI   F     NY  E F++ +  E+ +++ +I G 
Sbjct: 47  EEKEALTPKDFRINL-----VDFPLIFCDFDK-VKNYKGEDFLKLLKQEFPKLERIIVGY 100

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            F+FGK++      +Q      G +T+ +DE +  +++ V +S I+T L +  V  A + 
Sbjct: 101 DFKFGKEKKCSAKDIQNLC---GINTIIVDEFKI-QNKSVHTSMIKTLLKEAKVKEAKNF 156

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG  +TI++++I G+ IG    F T N+      L K+GVYA   + ++  SY  V+  G
Sbjct: 157 LGRFYTIQANIIKGQGIGAKELFATLNLYAKDFFLPKDGVYATLVKIEN-KSYHSVSFIG 215

Query: 246 RNPTMVPNGPLLLESFIFDFS-QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
              T   +    LE+ I D +      +   +SF DY+R   KF DI  LK  + +D  K
Sbjct: 216 IRST---DENFALETHILDENFTNTNAKSVELSFIDYIRANKKFNDIALLKAQISKDINK 272

Query: 305 ARKILES 311
           A++IL +
Sbjct: 273 AKQILGN 279


>gi|261885986|ref|ZP_06010025.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 254

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 19/265 (7%)

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
             +++S      ++P   +E+     G      +    +      ++F++ +  E+  +K
Sbjct: 1   MVVVESDKAC--ITPGDRREEY---SGVPCFYYH--LKDIVELRGDEFLKLLQNEFPNLK 53

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  F+FGKDRA D+  L+     +    + ++E  +     V SS IR  L  G +
Sbjct: 54  RIVVGYDFKFGKDRAWDKHDLKNL---FHGEVLVVNEF-SFDGLGVHSSAIRRFLRDGDI 109

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
             A  LLG  ++I+  VI G+ +G+   +PT N+ + P I  K GVYA R +  D T YS
Sbjct: 110 YRANRLLGREYSIKGRVISGQGLGKKSIYPTLNLVVEPYITPKNGVYATRTKIGDDT-YS 168

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFS--QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            +   G       +G   +ES +FD      IY     V F + +R   KF  +++LK  
Sbjct: 169 SITFIGNR--FTTDGAFSIESHLFDVDLKDNIY--EVRVCFIERIRDNFKFNSLDELKTQ 224

Query: 298 MGEDEKKARKILESSYPLSERDRII 322
           + +D   AR +      LS +D  I
Sbjct: 225 ISKDMLIARNV-AKCCDLSLQDDYI 248


>gi|330945203|gb|EGH46882.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 168

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 2/161 (1%)

Query: 147 YGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           YGF       +  +    VSS+ +R AL       A  +LG  F I   V+HG+K+ R L
Sbjct: 6   YGFTVEAAQTVEID-GIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQL 64

Query: 207 GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFS 266
           G PTAN+QL    +   GVY +     D  ++ GVAN G  PT+  +G   LE  + DF+
Sbjct: 65  GTPTANVQLKRRRVPLSGVYLVSTEI-DGKAWPGVANIGVRPTVTGDGSAHLEVHLLDFA 123

Query: 267 QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
            ++Y +R TV+F   LR E +F  +E LK  +  D   AR 
Sbjct: 124 GDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAARA 164


>gi|315453534|ref|YP_004073804.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           felis ATCC 49179]
 gi|315132586|emb|CBY83214.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           felis ATCC 49179]
          Length = 291

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 23/290 (7%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HL H  +L           + V  F P              L+P   +  +
Sbjct: 16  LAIGKFDGVHLAHQRLLSAL--YPQAGVLVVDRFEP-----------PKALTPLRERACL 62

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L       L          + SA  FI  +  ++  ++ ++ G  F+  + R+     L+
Sbjct: 63  LASY-AQNLYFLPLEQA-RHISARDFIALLTQKFPRLQKIVVGYDFKCAQGRSMGIEELR 120

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                   H   I E++  K   + S +I+T + +G VL A   LG  F ++  VI G+ 
Sbjct: 121 AMLSPQ-IHLEVITEIKI-KGISLHSYHIKTCIERGDVLLARKFLGRPFALQGVVIPGQH 178

Query: 202 IGRTLGFPTANMQ---LSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           +G    +PT N+    L   +L   GVYA      DQ     V+  G    +  +G +  
Sbjct: 179 LGHEHLYPTLNINTHSLQTQLLPCAGVYAT-DVLLDQKRVRAVSFLGHR--LSTDGQMAF 235

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
           E+ I D           V F   +R    F  + +LK  + +D  +AR +
Sbjct: 236 ETHILDQEITTPPPSLRVLFLKKIRDNRHFTHLAELKAQISQDIAQARAL 285


>gi|78777539|ref|YP_393854.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Sulfurimonas denitrificans DSM 1251]
 gi|78498079|gb|ABB44619.1| Riboflavin kinase / FAD synthetase [Sulfurimonas denitrificans DSM
           1251]
          Length = 276

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 28/292 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
             +AIG FDG+H+GH  +      +   S I V+             +    L+P   +E
Sbjct: 8   TAIAIGGFDGMHIGHQQLF---RALDEKSTIVVI------------ETGYANLTPKRERE 52

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
                      + Y    E  + + E+FI  +  ++ +++ ++ G  F FGKDR      
Sbjct: 53  SFSH-----YPLLYLELNEIRHLNGEEFIAFLKDKFPKLQKIVVGYDFHFGKDRKYSFNN 107

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L++  +                   V S  IR  L  G ++ A   LG+ +TI+  ++ G
Sbjct: 108 LKELFDNEVVVVNE----VTLHGDSVHSHKIRAKLQIGDIVGANAFLGHNYTIKGTLVSG 163

Query: 200 EKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS-YSGVANFGRNPTMVPNGPLLL 258
           + IG+     T N++    ++ KEGVY    R  D+   +  V+  G   T   +G   L
Sbjct: 164 QGIGKKELVATINLEAKEYLMPKEGVYVTLTRIDDEEHFHPSVSFVGHRIT--TDGSFAL 221

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           ES I D  + I  +R T+SF  ++R   KF  +++LK  + +D   A K L+
Sbjct: 222 ESHILD-GEVICKERATISFVSFIRENRKFDSLDELKKAIHKDIATASKELK 272


>gi|167753688|ref|ZP_02425815.1| hypothetical protein ALIPUT_01969 [Alistipes putredinis DSM 17216]
 gi|167658313|gb|EDS02443.1| hypothetical protein ALIPUT_01969 [Alistipes putredinis DSM 17216]
          Length = 251

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 16/234 (6%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VFH  E   +LP+  +     +G++DG+H GH ++L++  + A        VL+F PH
Sbjct: 1   MRVFHGFE---NLPS-FRSPAATVGSYDGVHSGHRVLLDRIRREAAAVGGESIVLTFAPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  + +   +  L+    +  +L++ G   LI   F    +   +E F++  L+  + V
Sbjct: 57  PRVTLGTQERLRLLTSLEEKIYLLDRFGIDNLIVIPFDRAFSRIPSESFVKDYLIGKVGV 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G   RFG D+ GD  +L    +++GF    I++ ++  ++ VSS+ IR  + +G 
Sbjct: 117 KNLVVGFNHRFGHDKEGDYRLLNGLHDEFGFRVTEIEK-QDVDAEKVSSTVIRRLIERGE 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           +  AA +L + + +  DV          G   +   L   +L   G Y +R   
Sbjct: 176 MNKAARMLSHPYLLAGDV-------DCAGHIASGEALK--LLPPPGEYPVRIEG 220


>gi|319957365|ref|YP_004168628.1| riboflavin kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419769|gb|ADV46879.1| Riboflavin kinase [Nitratifractor salsuginis DSM 16511]
          Length = 272

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 31/290 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            + +G+FDG+H+ H  ++E A        + V+                 TL+P   +  
Sbjct: 10  AITLGSFDGMHVAHQALIEAAEA------VAVI------------ERQSGTLTPGYKRSW 51

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
             +K     +  Y F     + S + F+  +   +  ++ ++ G  F FG  R G+   L
Sbjct: 52  YTDK----PMDFYLFDR-IRSLSPKAFVAMLREHYPRLRKIVVGYDFHFGVGRGGNAETL 106

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           ++    +      + E++  +   V +  IR  L  G +  A  LLG  + I+ + + G+
Sbjct: 107 KEL---FDGEVRIVPEIKV-EGVPVHARTIRELLRNGDLALANRLLGRCYLIDGEPVRGQ 162

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
             G     PT N+Q+    L  EGVYA  +    +  Y  V   G       +G   +E+
Sbjct: 163 GRGSREFVPTINLQVEGYELPAEGVYAG-YTHLGEACYPSVIFLGYR--DSTDGSFAVET 219

Query: 261 FIFDFSQEIYGQ-RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
            + D       + R  + F   LRP  +F +  +LK  +  D +KA   L
Sbjct: 220 HLLDKIIGPVEEPRVALEFEALLRPNRRFDNPAELKEQIYLDIEKAMARL 269


>gi|289434009|ref|YP_003463881.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170253|emb|CBH26793.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 245

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+H+GH  IL  A+ +  +   +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHIGHQKILNTALSLKKSDEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + EQF+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHFGVDYLIETAFTPRYAETTPEQFVTNHLSN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+     Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVELLRDLCAPYNIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
              A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FQEAEELLGHPWYISGMVENGEM-----------IDLDDYVLPATGEY 212


>gi|331702267|ref|YP_004399226.1| cytidyltransferase-like domain-containing protein [Lactobacillus
           buchneri NRRL B-30929]
 gi|329129610|gb|AEB74163.1| cytidyltransferase-related domain protein [Lactobacillus buchneri
           NRRL B-30929]
          Length = 276

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 12/239 (5%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNP 57
           M V + N     ++ +     V+A+G FDG+H GH  ++  A KI       + V++FN 
Sbjct: 1   MKVVYLNQHSQSNMSSSPTPIVLALGFFDGVHKGHQKVIATARKIASQKGYQLAVMTFNR 60

Query: 58  HPRTIIQSSS--PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           H   +   S       L+    + +++       L    FT + A  S + F+ + ++  
Sbjct: 61  HASRVFNHSQTASFRYLTTLKQKIELVRATHADILYVIDFTKQFAALSPKHFVDQYVI-G 119

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L  K V+ G  + FG+        L K        TV ++EL +++   +SS+ IR  + 
Sbjct: 120 LNAKVVVAGFDYTFGRGGTTTIDSLAKISGGK-VKTVTVNELASDQ-LKISSTRIRHLVR 177

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
             ++  A  LLG+ +     +IH +  G ++  P++ +Q     L + G Y    R  D
Sbjct: 178 DSNIQEATRLLGHPYETTGKLIHAQTNGLSIVNPSSRLQQ----LPESGRYLCEVRVAD 232


>gi|167972640|ref|ZP_02554917.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|167974634|ref|ZP_02556911.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|167976208|ref|ZP_02558485.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|167988706|ref|ZP_02570377.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|168363106|ref|ZP_02696280.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|198273693|ref|ZP_03206228.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209554240|ref|YP_002284755.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225550901|ref|ZP_03771850.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
 gi|225551305|ref|ZP_03772251.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|171903138|gb|EDT49427.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|184209202|gb|EDU06245.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|188018785|gb|EDU56825.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|188997869|gb|EDU66966.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|195659653|gb|EDX53033.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|198249721|gb|EDY74502.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209541741|gb|ACI59970.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225379120|gb|EEH01485.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|225380055|gb|EEH02417.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
          Length = 283

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L       NN   T+L+F   PR        I  L   + + + 
Sbjct: 22  LVIGFFDGIHLGHMNLLS----DPNNQ--TILTFKNIPR-------KIKKLYDFNERIQQ 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +GF  +  Y       N S E+FI ++ ++ L  K +I G  F +G +   +   L+
Sbjct: 69  LEDLGFKRIFIYDIDQN--NLSGEEFIDQI-LKPLTPKKIIVGANFTYGNNFC-NASSLK 124

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +      F+     ++  N    VS++ I+  +    V  A  LL   +    +V+ G++
Sbjct: 125 QY-----FNVEI--KIITND---VSTTKIKELIINKQVEIANKLLIKPYYRVGNVVRGDQ 174

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           I R +GF TAN+    +++ + EGVY  +    +   Y  V   G   T+      ++E+
Sbjct: 175 IARNIGFNTANILCDNNLIDIAEGVYKAQ-VIFNNKKYDSVVYLGIPKTINTRSFSMIEA 233

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            I DF+Q IY +R  + F  YL P +KF +I++L   +  
Sbjct: 234 HILDFNQNIYDERIKIVFLKYLAPNLKFNNIDELITAIKN 273


>gi|227508027|ref|ZP_03938076.1| possible FAD synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227192526|gb|EEI72593.1| possible FAD synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 277

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 11/236 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V +     QS     K  V+A+G FDG+H GH  +++ A  I      P+ V++FN H
Sbjct: 1   MQVIYLDSRQQSFIPSKKPIVLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
              I    S      L+    + +++EK+    L    F    A  S + FI+K ++  L
Sbjct: 61  ASRIFHHDSSSTFRYLTTLKQKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG+        +      +   TV + EL +++   + SS IR  + +
Sbjct: 120 NAKIVVAGFDYTFGQGGTTTIDSM-AAISNHRIQTVTVREL-DSQRLKIGSSRIRKLIGQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           G +  A  LLG+ +     +IH +  G ++  P++ +Q     L + G Y      
Sbjct: 178 GRIKEANKLLGHPYETTGKLIHAQIDGLSIVNPSSRLQQ----LPQTGSYLCDVTV 229


>gi|34557003|ref|NP_906818.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Wolinella
           succinogenes DSM 1740]
 gi|34482718|emb|CAE09718.1| PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE [Wolinella
           succinogenes]
          Length = 295

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 47/321 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F +I  + S+        VAIG FDG+HL H  +     +    + +TV        
Sbjct: 1   MKSFFSIFGDPSV------TSVAIGKFDGMHLAHQRLFSYLDE--GGAILTV-------- 44

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL------ETANYSAEQFIQKVLVE 114
                 +    L+P   + +              F L      +  + S E+FI  +   
Sbjct: 45  -----DAQRGNLTPGEYKRE-----------FTPFPLYSIPLGKIKHLSGERFIYMLKKA 88

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +  +  V+ G  FRFGK+RA     L+          V + E+  ++   V S  IR  +
Sbjct: 89  FPNLTKVVVGYDFRFGKNRAFGVEELRGYFAG---EVVVVPEVF-HRGHSVHSEAIRELI 144

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  LLG  + IE  V+ G  +G +  F T N+++   ++  EGVYA + +   
Sbjct: 145 AQGEMNLAGELLGRDYFIEGRVVRGNGLGSSALFATINLEVESFLIPLEGVYATKTKV-G 203

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR--CTVSFFDYLRPEIKFKDIE 292
           +  +  V+  G+  ++  +    +E+ +   S     +     + F + LR   +F ++ 
Sbjct: 204 ERCFGSVSFVGKRLSV--DNLFSIETHLLGVSPHAIPKTEVARIYFLERLRENRRFAELS 261

Query: 293 KLKIYMGEDEKKARKILESSY 313
            LK  + ED  +A +I   ++
Sbjct: 262 SLKAQISEDIGRAEQIHAKTF 282


>gi|313610067|gb|EFR85407.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes FSL F2-208]
          Length = 245

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   E Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCEPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
              A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FQEAEQLLGHPWYITGTVENGEM-----------IGLDDYVLPATGAY 212


>gi|217965172|ref|YP_002350850.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           HCC23]
 gi|217334442|gb|ACK40236.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes HCC23]
 gi|307570267|emb|CAR83446.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes L99]
          Length = 245

 Score =  179 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
              A  LLG+ + I  +V +GE            + L   +L   G Y
Sbjct: 176 FQEAEQLLGHPWYITGNVENGEM-----------IGLDDYVLPATGTY 212


>gi|242310728|ref|ZP_04809883.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pullorum MIT 98-5489]
 gi|239523126|gb|EEQ62992.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pullorum MIT 98-5489]
          Length = 296

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 83/325 (25%), Positives = 131/325 (40%), Gaps = 46/325 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN---- 56
           M  F ++       N      +A+G FDG+H+ H  I +       +S   VL       
Sbjct: 1   MQSFLSLVKEAKKANSF--TSIALGKFDGMHIAHQEIFKAL-----DSNGMVLCIESNRG 53

Query: 57  ---PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              P P        PI+ L+   I+EK                      S E F++ +  
Sbjct: 54  ELLPKPYRDFYCEFPIYHLALDIIKEK----------------------SGEDFVRFICG 91

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               +K ++ G  FRFGKDR      LQK    +    V I+E+   K   V S  I+  
Sbjct: 92  ILPNLKRIVVGYDFRFGKDRNCYTFDLQKY---FQGEVVVIEEVFC-KKLSVHSGLIKEL 147

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G++  A  LLG  F I   +I G+ IG+   + T N++    IL +EGVYA   +  
Sbjct: 148 LINGNLKEANKLLGRNFEIHGSIIKGQGIGKRELYATINIENDGFILPQEGVYAGYIQLG 207

Query: 234 DQTS----YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
            Q+     Y  V   G    +  +    +E  +     ++  +     F+  +R    F 
Sbjct: 208 KQSHITPKYPAVIFVGNR--LSTDKAFAIEGHLLGMEIKVKDKEAGFYFYRKIRENYYFD 265

Query: 290 DIEKLKIYMGEDEKKARKILESSYP 314
           ++E LK+ + +D +KA KIL+   P
Sbjct: 266 NLETLKMQIKQDIQKAYKILKIEIP 290


>gi|13357915|ref|NP_078189.1| riboflavin kinase/FAD synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|167971788|ref|ZP_02554065.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 6 str. ATCC 27818]
 gi|168282590|ref|ZP_02690257.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 14 str. ATCC 33697]
 gi|168308745|ref|ZP_02691420.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
 gi|170762213|ref|YP_001752438.1| riboflavin biosynthesis protein RibF-like protein [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|11357020|pir||C82902 riboflavin kinase/FAD synthetase UU355 [imported] - Ureaplasma
           urealyticum
 gi|6899335|gb|AAF30764.1|AE002132_8 riboflavin kinase/FAD synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827790|gb|ACA33052.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 3 str. ATCC 27815]
 gi|171902599|gb|EDT48888.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
 gi|182675630|gb|EDT87535.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 14 str. ATCC 33697]
 gi|186700796|gb|EDU19078.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma parvum
           serovar 6 str. ATCC 27818]
          Length = 283

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L       NN   T+L+F   PR        I  L   + + + 
Sbjct: 22  LIIGFFDGIHLGHMNLLS----DPNNQ--TILTFKNIPR-------KIKKLYDFNERIQQ 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           LE +GF  +  Y       N S E+FI ++ ++ L  K +I G  F +G +   +   L+
Sbjct: 69  LEDLGFKRIFIYDIDQN--NLSGEEFIDQI-LKPLTPKKIIVGANFTYGNNFC-NASSLK 124

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +      F+     ++  N    VS++ I+  +    V  A  LL   +    +V+ G++
Sbjct: 125 QY-----FNVEI--KIITND---VSTTKIKELIINKQVEIANKLLIKPYYRVGNVVRGDQ 174

Query: 202 IGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           I R +GF TAN+    +++ + EGVY  +    +   Y  V   G   T+      ++E+
Sbjct: 175 IARNIGFNTANILCDNNLIDIAEGVYKAQ-VIFNNKKYDSVVYLGIPKTINTRSFSMIEA 233

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            I DF+Q IY +R  + F  YL P +KF +I++L   +  
Sbjct: 234 HILDFNQNIYDERIKIVFLKYLAPNLKFNNIDELITAIKN 273


>gi|331699777|ref|YP_004336016.1| cytidyltransferase-related domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326954466|gb|AEA28163.1| cytidyltransferase-related domain protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 279

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 21/281 (7%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPR 60
           V+  +     +P+     VV +G FDG+H GH  ++  A+++  A   P  +++F+PHP 
Sbjct: 14  VWRGL---GEIPDGWGRCVVTLGVFDGVHRGHAHLIGSAVRLGRARRLPTVLVTFDPHPA 70

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++        LS    + ++  ++G  A+    FT   A   A  F  +VLV  L    
Sbjct: 71  KVLGLPRDTAALSTVERRAELAHQLGVDAVCVVPFTAALARVEAGDFAAQVLVGALHADA 130

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G+ F FG    GD   L++ GE++GF T  +  L        SS+ IR  L +G V+
Sbjct: 131 VVVGSNFTFGHRGTGDVDALRRLGEEHGFSTHPVGLLHAV-GTPCSSTYIRGCLARGDVV 189

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            AA  LG    ++  +    ++          +      +   G Y  R           
Sbjct: 190 AAARALGRPHRVDGVLFLAGEVVGAEV-----VVAEGAAVPAPGRYVGRLTGT------- 237

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
               GR   +       L   +   + ++ GQ   V F   
Sbjct: 238 ---VGRPVDLEVTAAGRLFVRLPGRAADLAGQSVAVDFLRR 275


>gi|213612702|ref|ZP_03370528.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 155

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 160 NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI 219
                +SS+ +R AL + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   +
Sbjct: 1   EGGVRISSTAVRQALAEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQV 60

Query: 220 LLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFF 279
              +GVYA+           GVAN G  PT+       LE  + D   ++YG+   V   
Sbjct: 61  SPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLEVHLLDVVMDLYGRHIDVILR 119

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +R E +F  +++LK  +  DE  ARK  
Sbjct: 120 KKIRNEQRFASLDELKAQIARDELTARKFF 149


>gi|227511048|ref|ZP_03941097.1| possible FAD synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227085790|gb|EEI21102.1| possible FAD synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 277

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 11/236 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V +     QS     K  V+A+G FDG+H GH  +++ A  I      P+ V++FN H
Sbjct: 1   MQVIYLDSRQQSFIPSKKPIVLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
              I    S      L+    + +++EK+    L    F    A  S + FI+K ++  L
Sbjct: 61  ASRIFHHDSSSTFRYLTTLKQKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG+        +      +   TV + EL +++   + SS IR  + +
Sbjct: 120 NAKIVVAGFDYTFGQGGTTTIDSM-AAISNHRIQTVTVREL-DSQRLKIGSSRIRKLIGQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           G +  A  LLG+ +     +IH +  G ++  P++ +Q     L + G Y      
Sbjct: 178 GRIKEANKLLGHPYETTGKLIHAQIDGLSIVNPSSRLQQ----LPQTGSYLCDVTV 229


>gi|291276797|ref|YP_003516569.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           mustelae 12198]
 gi|290963991|emb|CBG39830.1| putative riboflavin kinase /FMN adenylyltransferase [Helicobacter
           mustelae 12198]
          Length = 281

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 25/289 (8%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDG+HLGH  +L++         + +++ NP              LS  S ++  
Sbjct: 15  LAIGKFDGVHLGHQRLLQELGSF---GGVLIITQNPQ-------KKSDGALSNLSWRQTW 64

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +++     +   +F      +S E+F+  +   + ++K ++ G  F FG+ R      L 
Sbjct: 65  IKQ----KVFFLEF-EAIKEWSGEEFLCFLKEHFKKLKKLVVGYDFCFGRARQYTSRDLC 119

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                +    V + E+   K   V +  I+  L  G +  A  LLG  + I+  VI G+ 
Sbjct: 120 HL---FDGDVVIVPEV-IEKGIPVHTQKIKELLLLGELSLANLLLGRDYQIQGAVIKGQG 175

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +GR   +PT N+++   ++ K+GVYA   +   +   +     G   T   +G   +E  
Sbjct: 176 LGRKSLYPTFNLRVQNYVIPKDGVYAGYVQ-DGEDRIACAIFVGVRST---DGAFSIEVH 231

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + +  +E      T+ F + +R  + F +++ LK  + +D +  + IL+
Sbjct: 232 LLEKFREF--GHMTLQFRERIRDNLSFANLKDLKKQITQDLQNIKNILK 278


>gi|46906978|ref|YP_013367.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091690|ref|ZP_00229486.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|226223358|ref|YP_002757465.1| riboflavin kinase / FAD synthase [Listeria monocytogenes Clip81459]
 gi|255521404|ref|ZP_05388641.1| riboflavin kinase / FAD synthase [Listeria monocytogenes FSL
           J1-175]
 gi|46880244|gb|AAT03544.1| putative riboflavin kinase/FMN adenylyltransferase [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47020009|gb|EAL10746.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|225875820|emb|CAS04523.1| Putative riboflavin kinase / FAD synthase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|328467292|gb|EGF38372.1| riboflavin kinase / FAD synthase [Listeria monocytogenes 1816]
          Length = 246

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 110/253 (43%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|116872116|ref|YP_848897.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|116740994|emb|CAK20114.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 246

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+HLGH  IL+ A+ I      +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRPAVLTIGKFDGVHLGHQTILKTALSIKKEHEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSNHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G++F FGK R  D  +L+   + YG     +  +  N+   +SS+NIR+ + +GH
Sbjct: 117 SHIIVGSEFNFGKGRDSDVDLLRNLCKPYGISVTSVPVIETNQ-TKISSTNIRSYIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
              A  LLG+ + I   V +G             + L   +L   G
Sbjct: 176 FQEAEQLLGHPWYITGLVENGVM-----------IGLDDYVLPASG 210


>gi|237751770|ref|ZP_04582250.1| riboflavin kinase/FAD synthase RibF [Helicobacter bilis ATCC 43879]
 gi|229373136|gb|EEO23527.1| riboflavin kinase/FAD synthase RibF [Helicobacter bilis ATCC 43879]
          Length = 294

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 82/326 (25%), Positives = 134/326 (41%), Gaps = 36/326 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F +  +N  LP       VAIG FDG+H  H  +L       N   +++        
Sbjct: 1   MKSFLSF-VNSKLPYER----VAIGKFDGMHKAHKYLLGLV--GTNGCALSI-------- 45

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
               S  P F ++PP  + K           R +F     ++ + QF+Q + +    +K 
Sbjct: 46  ---ASVKPPF-ITPPKERTKYTHI----PFFRLRF-ESIKSWDSMQFLQLLFMVMPHLKC 96

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIV--SSSNIRTALTKGH 178
           ++ G  F FGKDR      L    ++ G   V I  +       +   +S I+  L +G 
Sbjct: 97  IVIGYDFHFGKDRMSHASDLYGLLKRMGKAEVQIKIIAPQTYLNIPLHTSIIKDLLKQGE 156

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           + NA  +L   + I+  +I G+ IG    +PT NM+ +   + K GVYA          Y
Sbjct: 157 IQNANAMLERFYHIKGRIIKGQGIGSKELYPTINMKNTLYFVPKHGVYATFAYYNGM-LY 215

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           + V+  G       +    +E+ I + +    + +  T+ F  YLR   KF ++  LKI 
Sbjct: 216 NAVSFVGNR--FSTDERFCIETHIINETINTKHNEVITIFFVAYLRDNKKFLNLNDLKIQ 273

Query: 298 MGEDEKKARKILESSYPLSERDRIIC 323
           +  D   A++       LS  DR  C
Sbjct: 274 IESDITDAKE------KLSTHDRTYC 293


>gi|315281397|ref|ZP_07870030.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           marthii FSL S4-120]
 gi|313614958|gb|EFR88469.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           marthii FSL S4-120]
          Length = 245

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+HLGH  IL  A+ I      +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHLGHQTILNTALSIKKEHEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVTDHLTN-LHL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + YG     +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYGIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            + A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FIEAEQLLGHPWYITGKVENGEM-----------IDLDDYVLPATGTY 212


>gi|313620016|gb|EFR91543.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           innocua FSL S4-378]
          Length = 245

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F+   L   L++
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSDHLSN-LQL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G++F FGK R  D  +L+   + YG     +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIIVGSEFNFGKGRDSDVDLLRDLCKPYGIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            L A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FLEAEQLLGHPWYITGMVENGEM-----------VGLDDYVLPATGTY 212


>gi|16799810|ref|NP_470078.1| hypothetical protein lin0735 [Listeria innocua Clip11262]
 gi|16413187|emb|CAC95967.1| lin0735 [Listeria innocua Clip11262]
          Length = 245

 Score =  178 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F+   L   L++
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVTDHLSN-LQL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G++F FGK R  D  +L+   + YG     +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIIVGSEFNFGKGRDSDVDLLRDLCKPYGIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            L A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FLEAEQLLGHPWYITGMVENGEM-----------VGLDDYVLPATGTY 212


>gi|23100326|ref|NP_693793.1| FMN adenylylate transferase [Oceanobacillus iheyensis HTE831]
 gi|22778558|dbj|BAC14827.1| riboflavin kinase : FMN adenylylate transferase (riboflavin
           biosynthesis) [Oceanobacillus iheyensis HTE831]
          Length = 275

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 17/238 (7%)

Query: 1   MHVF---HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSF 55
           M V    H  +    +P+     ++A+G FDG+HLGH  +L+ A ++A    I  T ++F
Sbjct: 1   MEVINLTHRDKQLSQIPH-----IMAVGFFDGVHLGHQELLKHAKELARKQNILFTAMTF 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           +PHP  +++       L   S + K +E +G   L   +F    A+    +FIQK +V  
Sbjct: 56  SPHPDEVLKGDKNRKYLMSLSQKIKKMESIGVDKLFVMEFDYTFASLLPAEFIQKYIVNS 115

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
              K V+ G  F FG    G+   LQK  EK GF    I + +    + +SS+ +R  + 
Sbjct: 116 -NTKHVVVGFDFTFGFKAQGNTTYLQKESEKLGFGLSVIPK-KTYLQEKISSTLVRGLIQ 173

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           +G+V    + LG  + +   V+  +  G  +  P+        I    G Y ++ +  
Sbjct: 174 EGNVDLVPYYLGSNYEVSVHVLQYKINGNIIVHPS-----EKSIFPSPGSYLVKVKHG 226


>gi|224499598|ref|ZP_03667947.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes Finland 1988]
          Length = 246

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|2765032|emb|CAA71028.1| hypothetical protein [Calothrix viguieri]
          Length = 220

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 13/198 (6%)

Query: 44  IANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYS 103
              N   TV++F+PHP+    S  P   L+P + + K L  +G   L+   F  E    S
Sbjct: 11  QQRNIHSTVVTFDPHPQEFF-SGKPRTLLTPLNEKVKQLRLLGVEQLVLLPFDRELCELS 69

Query: 104 AEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ 163
             +F++K+LV+ L+   +  G  FRFG  R+G    LQ    +Y      +    + +  
Sbjct: 70  PVEFVEKILVQQLQATQISVGQDFRFGSKRSGTAYDLQIIAARYNIPVTIVSLEIDTQHD 129

Query: 164 -----------IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
                       +S+S IR+ L +G+V  A  LLG  +++   V+ G+++GRT+GFPTAN
Sbjct: 130 STAQNTCPEMTRISTSLIRSILEEGNVERAQQLLGRPYSLHGVVVKGQQLGRTIGFPTAN 189

Query: 213 MQLSPDI-LLKEGVYAIR 229
           ++L  D  L + GVYA+R
Sbjct: 190 LELPKDKFLPRNGVYAVR 207


>gi|254994019|ref|ZP_05276209.1| riboflavin kinase / FAD synthase [Listeria monocytogenes FSL
           J2-064]
          Length = 246

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +++ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKKRWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|313624667|gb|EFR94631.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           innocua FSL J1-023]
          Length = 245

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 18/228 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+HLGH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDRRPAVLTIGKFDGVHLGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F+   L   L++
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVSDHLTN-LQL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G++F FGK R  D  +L+   + YG     +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIIVGSEFNFGKGRDSDVDLLRDLCKPYGIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            L A  LLG+ + I   V +GE            + L   +L   G Y
Sbjct: 176 FLEAEQLLGHPWYITGMVENGEM-----------VGLDDYVLPATGTY 212


>gi|32266017|ref|NP_860049.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter hepaticus ATCC 51449]
 gi|32262066|gb|AAP77115.1| riboflavin kinase/FAD synthase RibF [Helicobacter hepaticus ATCC
           51449]
          Length = 286

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 33/313 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F ++  ++ + +      +A+G FDG+HL H  + +          +  +       
Sbjct: 1   MKNFLSMCSDKEVQS------LALGKFDGMHLAHKELFKHL---DKKGALLCI------- 44

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +       L+P        E+    ALI   F  E +++S E+FI  +  ++  +K 
Sbjct: 45  ---EGKFDDMCLTPSK------EQYSPCALIYVAF-EEISHWSGEKFITILKEKFPSLKR 94

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  F FGK+RA     L           V + E R N    V SS I+  +  G + 
Sbjct: 95  LVVGYDFHFGKNRAFSASDLCHLFAG---EVVIMPEYRIN-GVGVHSSLIKEFIRYGDMD 150

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            A  +LG  + ++  +I G+ +G    +PT N+Q    ++ +EGVYA   +  ++     
Sbjct: 151 MAVAMLGRYYHLQGTIIKGQNLGSKRLYPTINIQTRGYVIPQEGVYASFTKV-NEKIMPS 209

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           V   G    +  +    +ES I D          ++ F   +R    F D+  LK  + +
Sbjct: 210 VCFVGHR--LSTDRHFSIESHILDKEIVCESDMASICFVRKIRDNQSFSDLNLLKERITQ 267

Query: 301 DEKKARKILESSY 313
           D   ++ IL ++ 
Sbjct: 268 DIITSKVILSAAQ 280


>gi|149194566|ref|ZP_01871662.1| hypothetical protein CMTB2_00944 [Caminibacter mediatlanticus TB-2]
 gi|149135310|gb|EDM23790.1| hypothetical protein CMTB2_00944 [Caminibacter mediatlanticus TB-2]
          Length = 252

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 55/297 (18%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDG+H+GH  ++ +A                    +I+ +S    L+P       
Sbjct: 3   ITIGGFDGMHIGHMKLIRKADAYL----------------VIEKNS---NLTP------- 36

Query: 82  LEKMGFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
               GF  +          +  +  N SA +FI+ +  +    + +I G  FRFGK+R+G
Sbjct: 37  ----GFDRIYYSPTLLDILYLEKIKNLSAIEFIEIL--KKYNAQKIIVGDDFRFGKNRSG 90

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           D  +L+K      F    I E++ N    + S  IR  +  G +  A   LG+ + I+  
Sbjct: 91  DIELLKKF-----FEVEVIHEIKINN-IGIHSHYIRILIKNGEIKKANKFLGHIYKIKGI 144

Query: 196 VIHGEKIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNG 254
            I G+ +G    FPT N+       L K GVY  +        Y  +   G   T   + 
Sbjct: 145 KIKGQGLGSKELFPTINITPFKNYFLPKAGVYITKTNG-----YQSITFIGTRST---DK 196

Query: 255 PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +E+ I +  ++       + F ++LR  I F+ + +LK  +  D  K      +
Sbjct: 197 NFSIETHILEDFED--NSFFEIEFLEFLRENIYFRSLNQLKNQIAVDIIKTTNFFRN 251


>gi|254823992|ref|ZP_05228993.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300765046|ref|ZP_07075033.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           FSL N1-017]
 gi|293593220|gb|EFG00981.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514171|gb|EFK41231.1| riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           FSL N1-017]
          Length = 246

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 110/253 (43%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPTTGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|254933605|ref|ZP_05266964.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293585168|gb|EFF97200.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|328475601|gb|EGF46354.1| riboflavin kinase / FAD synthase [Listeria monocytogenes 220]
 gi|332311151|gb|EGJ24246.1| Riboflavin kinase/FMN adenylyltransferase [Listeria monocytogenes
           str. Scott A]
          Length = 246

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V +   +        +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSN---VTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVRDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|227523239|ref|ZP_03953288.1| possible FAD synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227089626|gb|EEI24938.1| possible FAD synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 277

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 11/236 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQA--IKIANNSPITVLSFNPH 58
           M V +     QS     K  V+A+G FDG+H GH  +++ A  I      P+ V++FN H
Sbjct: 1   MQVIYLDSRQQSFIPSKKPIVLALGFFDGVHKGHQFVIQTAGKIANQRGLPLAVMTFNRH 60

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                   S      L+    + +++EK+    L    F    A  S + FI+K ++  L
Sbjct: 61  ASRSFHHDSSSTFRYLTTLKQKAELIEKLHADILYVVDFNQHFAGLSPKTFIEKYVI-GL 119

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             K V+ G  + FG+        +      +   TV + EL +++   + SS IR  + +
Sbjct: 120 NAKIVVAGFDYTFGQGGTTTIDSM-AAISNHRIQTVTVREL-DSQRLKIGSSRIRKLIGQ 177

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
           G +  A  LLG+ +     +IH +  G ++  P++ +Q     L + G Y      
Sbjct: 178 GRIKEANKLLGHPYETTGKLIHAQIDGLSIVNPSSRLQQ----LPQTGSYLCDVTV 229


>gi|294502570|ref|YP_003566632.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
 gi|294353029|gb|ADE63370.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
          Length = 152

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 163 QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK 222
             +SS+ IR AL    ++ A  LLG+ ++I   V+HG+++GRT+GFPTAN+ L   +   
Sbjct: 1   MRISSTAIRQALHDDDLVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPV 60

Query: 223 EGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
           +GVYA+       T   GVAN G  PT+       LE  + D + ++YG    V     L
Sbjct: 61  KGVYAVDVYGLGSTPLYGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGCHIDVVLRAKL 119

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
           R E +F  +E LK  +  D   AR       P+
Sbjct: 120 RNEQRFASLEALKQQIANDVVTARTFFGLKTPV 152


>gi|145640632|ref|ZP_01796215.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae R3021]
 gi|145274558|gb|EDK14421.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Haemophilus
           influenzae 22.4-21]
          Length = 163

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 1/151 (0%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
            +Q +SS+ IR AL    +  A +LLG  + I   VIHG K+GRT+GFPTAN++L   + 
Sbjct: 14  DAQRISSTAIREALANDDLQLAENLLGKPYRIFGRVIHGNKLGRTIGFPTANIRLHRQVN 73

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFD 280
             +GVYA++ R +    ++GVAN G+ PT+      LLE  +FDFSQ IYGQ   V F  
Sbjct: 74  PIKGVYAVKVRLKSGEIFNGVANMGKRPTINGLMQ-LLEVHLFDFSQNIYGQMVEVEFCH 132

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +R EIKF   + LK+ + +D + A+    S
Sbjct: 133 KIRNEIKFPSFDDLKVQIEKDVETAKAFFNS 163


>gi|254828812|ref|ZP_05233499.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258601224|gb|EEW14549.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 246

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G + LI  +FT   A  + E+F+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRNSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|16802770|ref|NP_464255.1| hypothetical protein lmo0728 [Listeria monocytogenes EGD-e]
 gi|47095293|ref|ZP_00232904.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224501967|ref|ZP_03670274.1| hypothetical protein LmonFR_05542 [Listeria monocytogenes FSL
           R2-561]
 gi|254830282|ref|ZP_05234937.1| hypothetical protein Lmon1_02937 [Listeria monocytogenes 10403S]
 gi|254900036|ref|ZP_05259960.1| hypothetical protein LmonJ_09485 [Listeria monocytogenes J0161]
 gi|254911411|ref|ZP_05261423.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935738|ref|ZP_05267435.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801058|ref|YP_003412923.1| hypothetical protein LM5578_0807 [Listeria monocytogenes 08-5578]
 gi|284994200|ref|YP_003415968.1| hypothetical protein LM5923_0762 [Listeria monocytogenes 08-5923]
 gi|16410117|emb|CAC98806.1| lmo0728 [Listeria monocytogenes EGD-e]
 gi|47016364|gb|EAL07286.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258608321|gb|EEW20929.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284056620|gb|ADB67561.1| hypothetical protein LM5578_0807 [Listeria monocytogenes 08-5578]
 gi|284059667|gb|ADB70606.1| hypothetical protein LM5923_0762 [Listeria monocytogenes 08-5923]
 gi|293589351|gb|EFF97685.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 246

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 27/253 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G + LI  +FT   A  + E+F+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH
Sbjct: 117 SHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
              A  LLG+ + I   V +GE  G           L   +L   G Y            
Sbjct: 176 FQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPATGTYQTDS-------- 216

Query: 239 SGVANFGRNPTMV 251
            G+ N   N T+ 
Sbjct: 217 -GIVNVTNNRTIE 228


>gi|217031585|ref|ZP_03437090.1| hypothetical protein HPB128_21g143 [Helicobacter pylori B128]
 gi|216946785|gb|EEC25381.1| hypothetical protein HPB128_21g143 [Helicobacter pylori B128]
          Length = 215

 Score =  174 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 104/220 (47%), Gaps = 7/220 (3%)

Query: 91  IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFH 150
           + + +  E +  +A +F++ +  ++  ++ ++ G  FRFG  R  D   L++R EK    
Sbjct: 3   LFFVYLEEISQLNALEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEK---- 58

Query: 151 TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPT 210
           T+ + E++  K   V S  I+ AL+ G +  A  LLG  + +   VI  + +G     PT
Sbjct: 59  TIIVPEVKI-KEISVHSKTIKLALSHGDLSLANKLLGRPYEVCGKVISDQGLGHKELVPT 117

Query: 211 ANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIY 270
            N++    IL   GVYA   + +D      V+  G    +  +    +E  + D   E  
Sbjct: 118 LNIKTKDFILPSFGVYASLVKIKDPIYQKSVSFIGNR--LSTDRNFAIECHVLDTIIEKP 175

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +   + +   +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 176 PKEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR 215


>gi|294500342|ref|YP_003564042.1| FAD Synthetase [Bacillus megaterium QM B1551]
 gi|294350279|gb|ADE70608.1| FAD Synthetase [Bacillus megaterium QM B1551]
          Length = 181

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 12/179 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   V+AIG FDG+H GH  ++++A+  +     P  V +F+P PR   QS      L+P
Sbjct: 11  LPASVIAIGAFDGVHQGHQAVIKRAVNRSKALKVPSVVYTFDPPPRFHFQSDQ---VLTP 67

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  ++ ++G    +   F    A   +  FI  +  + L    +I G  FRFG++R 
Sbjct: 68  IDQKVHLIAELGVDYAVIIHFDELYAKRPSIDFISNL--KKLNPSEIIVGNDFRFGRNRE 125

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           GD  +L K      F    I  +  ++   +SS+ IR  L +G +  +  LLG+    E
Sbjct: 126 GDIKLLAKH-----FLVDIIPPVCCSEGTRISSTRIRQLLQQGAIDQSNDLLGWSLQKE 179


>gi|313157023|gb|EFR56455.1| riboflavin kinase [Alistipes sp. HGB5]
          Length = 245

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 19/228 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M VFH  E   +LP H     V +G++DG+H GH  +L      A        V +F PH
Sbjct: 1   MRVFHGFE---ALP-HFTHPAVTVGSYDGVHSGHLKLLRTVTAAARGQGGESIVFTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  +  +  +  L+    +  +LE++G   L+   F    +  + ++F++  LV     
Sbjct: 57  PRITLGKADGLRLLTTLDEKICLLERLGIDNLVIIPFDRAFSRLAPDEFVRDCLVGHTGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG D+ G    L   G  +G   + + E  +  ++ VSS+ IR  + +G 
Sbjct: 117 ETLVVGFNHRFGHDKQGSYDYLDSHG--FGLRVIEVSE-CDVDAEKVSSTVIRQLVGEGK 173

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           +  AA LL + + +    +               ++    +L   G Y
Sbjct: 174 MARAARLLAHPYLVIGRALRNRIR----------VEDPLKLLPPPGEY 211


>gi|57241997|ref|ZP_00369937.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis RM3195]
 gi|57017189|gb|EAL53970.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis RM3195]
          Length = 282

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 136/290 (46%), Gaps = 29/290 (10%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDGIHLGH  ++++      N  + V+           +      LS    ++++
Sbjct: 16  LAIGCFDGIHLGHLELIKRL---NLNEALLVI-----------NKFKGEILSDFKQKQEL 61

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            ++    A+   +F  E  +  A+ F+  +  E+  ++ ++ G  F FG ++      ++
Sbjct: 62  SKR----AIFTLEF-EEIRHLKAQDFLHLLRQEFKFLEHIVVGYDFVFGHNKEAKAFDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +     G  T  + E + +    V +S I+  L +G V  A   LG +++I++ VI G+ 
Sbjct: 117 RLS---GIKTSIVPEFKLD-GLSVHASLIKDFLARGEVKKAERFLGRKYSIKARVIRGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G+   F T N++     L K GVYA   +   +  +  V+  G   T   +    +E+ 
Sbjct: 173 LGKKELFATLNLRNCNYFLPKNGVYASMIKI-GEERFKSVSFLGVRST---DLTFSIETH 228

Query: 262 IFDFSQEI--YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           I +  ++I  + +   + F ++LR    F D++ LK  + +D +K ++IL
Sbjct: 229 ILENFEKIVQFDEEVELFFVEFLRENESFSDLKALKQKISQDIEKTKEIL 278


>gi|237752360|ref|ZP_04582840.1| riboflavin kinase/FAD synthetase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375849|gb|EEO25940.1| riboflavin kinase/FAD synthetase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 288

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 130/319 (40%), Gaps = 42/319 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP--- 57
           M  F ++  N     ++    +A+G FDG+HLGH  + +   ++  N  I  +       
Sbjct: 1   MQSFLSLVKNSKFAKNI--TSLALGKFDGLHLGHQALFK---ELDENGAILCIEQENGVL 55

Query: 58  HPRTI--IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
            P+      +  P+F ++   I+ K                      S ++F+  +    
Sbjct: 56  LPKKYRSFYAKYPMFYIALDIIRNK----------------------SDKEFVAFLQSVL 93

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             ++ ++ G  FRFGKDR      L +  +      V ++E+   K   V S  I+  L 
Sbjct: 94  PNLRRIVVGYDFRFGKDRFYYPFDLLQSFKG---EVVVVNEVLC-KKLSVHSGLIKELLL 149

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            G+V  A+  LG  + I  ++I G+ +G+   + T N+Q    +L +EGVYA   +  +Q
Sbjct: 150 NGNVKQASKFLGRLYEIRGEIIKGQGLGKRELYATINLQNDGFLLPQEGVYAGFIQLGEQ 209

Query: 236 T----SYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
                 Y  V   G    +  +    +E  +     E+        F   +R   KF ++
Sbjct: 210 KLESKKYPAVIFIGNR--LSTDKSFSIEGHLLGIEVEVKESEAGFYFAKKIRNNRKFDNL 267

Query: 292 EKLKIYMGEDEKKARKILE 310
           E LK  +  D  +A KIL+
Sbjct: 268 ESLKKQISCDINEAYKILK 286


>gi|254555876|ref|YP_003062293.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
 gi|254044803|gb|ACT61596.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum JDM1]
          Length = 282

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 21/243 (8%)

Query: 1   MHVF----HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLS 54
           M V     H +++  S P      V+A+G FDG+H GH  +++ A +IA     P+ V++
Sbjct: 1   MQVINLDAHRLKMLASQP----PLVLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMT 56

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           FN H   + +S +    L+  + + + +  +    L    F  + A  +   FI+  LV 
Sbjct: 57  FNRHASQLFKSQTTFRYLNTVAQKSQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLV- 115

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + V+ G  + FG+  A     L + G  Y F TV +D L  N+   VSS+ IR  +
Sbjct: 116 GLNAQVVVAGFDYTFGQGGANGMRELAELGAPY-FETVTVDRL-ANQQLKVSSTRIRGLI 173

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  LLGY +  ++               T  +      L   G Y     + +
Sbjct: 174 ARGQIEQANDLLGYTYATQATFDP--------LTRTIQLANRQQQLPAAGDYRCWLVSAN 225

Query: 235 QTS 237
              
Sbjct: 226 YRQ 228


>gi|315301998|ref|ZP_07872985.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           ivanovii FSL F6-596]
 gi|313629631|gb|EFR97777.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           ivanovii FSL F6-596]
          Length = 245

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 26/251 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFNPHP 59
           M V H   +        +  V+ IG FDG+H+GH  IL +A+ I      +T +SF+PHP
Sbjct: 1   MEVSH---VTLEPSKDSRPSVLTIGKFDGVHIGHQTILNKALSIKREQEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G + LI   FT + A  + EQF++   +  L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAHFGVNHLIETAFTPKYAETTPEQFVESH-LSQLNL 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +I G++F FGK R  D  +L+          + +  ++ N+   +SS+NIR  + +GH
Sbjct: 117 SHIIVGSEFNFGKGRDSDVELLRDLCVPRNIGVISVPVIQTNQ-TKISSTNIRAFIRRGH 175

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG--------VYAIRF 230
              A  LLG+ + I   V +GE            + L   +L   G        VY    
Sbjct: 176 FQEAEELLGHLWYITGTVENGEM-----------IGLDDYVLPATGKYQTDIGIVYITNA 224

Query: 231 RTQDQTSYSGV 241
           RT       GV
Sbjct: 225 RTIQLDMPDGV 235


>gi|331696909|ref|YP_004333148.1| cytidyltransferase-related domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326951598|gb|AEA25295.1| cytidyltransferase-related domain protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 264

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 17/276 (6%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIF 70
           +P  L+ G+VAIG FDG+H GH  ++ +A + A+   +   V++F+ HP ++++      
Sbjct: 1   MPPALRAGIVAIGQFDGVHRGHRELVSRARRKADELGVAAGVVTFSRHPASLLRPLEEPP 60

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           +L     + ++L + G   ++    +          F+   L+  L+ ++++ G  FRFG
Sbjct: 61  SLCTLHDKVEMLVESGADFVVALPVSARLLQTPPADFVTTTLLRDLQARSIVVGANFRFG 120

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
               GD G+L+  G  +G   + +D L +     VSS+ IR  +  GHV  AA LLG   
Sbjct: 121 HKAVGDAGLLRDIGRAHGTDVLIVD-LLDVDEGPVSSTRIRGLIAAGHVHAAARLLGREH 179

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            ++S V    +   T  F    M          GVY +    +D TS     N  R  T 
Sbjct: 180 RLDSVVTAHRQDVITARFRAGVM------PPAPGVYEV--AVEDLTSL----NRTRQTTA 227

Query: 251 VPNGPLLLESFI--FDFSQEIYGQRCTVSFFDYLRP 284
              GP      +    F++     +  +SF  ++R 
Sbjct: 228 ATIGPARSARILAPPSFARPPVDGQVRLSFLRHVRE 263


>gi|300767669|ref|ZP_07077579.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300494654|gb|EFK29812.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 290

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 21/243 (8%)

Query: 1   MHVF----HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLS 54
           M V     H +++    P      V+A+G FDG+H GH  +++ A +IA     P+ V++
Sbjct: 9   MQVINLDAHRLKMLAPQP----PLVLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMT 64

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           FN H   + +S +    L+  + + + +  +    L    F  + A  +   FI+  LV 
Sbjct: 65  FNRHASQLFKSQTTFRYLNTVAQKSQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLV- 123

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + V+ G  + FG+  A     L + G  Y F TV +D L  N+   VSS+ IR  +
Sbjct: 124 GLNAQVVVAGFDYTFGQGGANGMRELAELGAPY-FETVTVDRL-ANQQLKVSSTRIRGLI 181

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  LLGY +  ++               T  +      L   G Y     + +
Sbjct: 182 ARGQIEQANDLLGYTYATQATFDP--------LTRTIQLANRQQQLPAAGDYRCWLVSAN 233

Query: 235 QTS 237
              
Sbjct: 234 YRQ 236


>gi|28377693|ref|NP_784585.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|28270526|emb|CAD63430.1| bifunctional protein: riboflavin kinase; FMN adenylyltransferase
           [Lactobacillus plantarum WCFS1]
          Length = 282

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 21/243 (8%)

Query: 1   MHVF----HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLS 54
           M V     H +++    P      V+A+G FDG+H GH  +++ A +IA     P+ V++
Sbjct: 1   MQVINLDAHRLKMLAPQP----PLVLALGFFDGVHQGHQRVIQTAKRIAKQRDLPLAVMT 56

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           FN H   + +S +    L+  + + + +  +    L    F  + A  +   FI+  LV 
Sbjct: 57  FNRHASQLFKSQTTFRYLNTVAQKSQHMAALQVDRLYITDFNHQFAGLTPTAFIKDYLV- 115

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L  + V+ G  + FG+        L + G  Y F TV +D L  N+   VSS+ IR  +
Sbjct: 116 GLNAQVVVAGFDYTFGQGGTNGMRELAELGAPY-FETVTVDRL-ANQQLKVSSTRIRGLI 173

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
            +G +  A  LLGY +  ++               T  +      L   G Y     + +
Sbjct: 174 ARGQIEQANDLLGYTYATQATFDP--------LTRTIQLANRQQQLPAAGDYRCWLVSAN 225

Query: 235 QTS 237
              
Sbjct: 226 YRQ 228


>gi|2444455|gb|AAB71604.1| hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 307

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 4/153 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
              + SSS +R  + +G V  A  LLG  F ++  V+ G   GR +GFPTAN+    ++ 
Sbjct: 152 DGVVASSSRVREYILEGRVSAARRLLGRPFDLDGTVVTGAGRGRGIGFPTANVDTQNELR 211

Query: 221 LKEGVYAIRFRTQDQ---TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
              GVYAIR +   +   T + G AN G  PT      + +E+ + DF+ ++YG+   V 
Sbjct: 212 PAPGVYAIRVQLPGESKGTWHGGAANIGVKPTF-GGTEVTIEAHLLDFTGDLYGKELRVQ 270

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           F D LRPE +F  + +L   +  D + AR ++ 
Sbjct: 271 FLDRLRPEQRFGSVVELTGQIKRDVEAARAVIA 303



 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHL 36
          M V+            L G  +A+GNFDG+H+GH  
Sbjct: 1  MKVY---PAVADAGRALAGQALALGNFDGVHVGHQA 33


>gi|195868008|ref|ZP_03080003.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
 gi|195660300|gb|EDX53562.1| riboflavin biosynthesis protein RibF homolog [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
          Length = 288

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 31/281 (11%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + IG FDGIHLGH  +L      +      +L+F   PR           L     + + 
Sbjct: 22  LVIGFFDGIHLGHMSLLSNPENRS------ILTFKRIPR-------KTKNLFEFDERIQQ 68

Query: 82  LEKMGFSALIRYK-FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           LE +GF  +  Y  F          +FI+++L   L    +I G  F +G DR  +   L
Sbjct: 69  LEDLGFKNIFVYDIFENNLIGT---EFIEQILAP-LSPNKIIVGANFTYGNDRC-NAYSL 123

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +K         V I E+  N    +S+S I+  +    +  A  LL   +    +V++G 
Sbjct: 124 KKYFN------VEIKEITYN----ISTSRIKELIINKQIELANELLIKPYYRVGNVVYGN 173

Query: 201 KIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
           +I R+LGF TAN+     ++ + EGVY       D   Y  V   G   T+      ++E
Sbjct: 174 QIARSLGFNTANILCDNSLIDIAEGVYQAE-VVFDNQKYDSVVYLGIPKTIHSRSYSMIE 232

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
           + I +FSQ+IY +   + F  YL P +KF  + +L   + +
Sbjct: 233 AHILNFSQDIYCKEIKIIFLKYLAPNLKFNSVNELTNAIKK 273


>gi|329767230|ref|ZP_08258757.1| hypothetical protein HMPREF0428_00454 [Gemella haemolysans M341]
 gi|328836897|gb|EGF86544.1| hypothetical protein HMPREF0428_00454 [Gemella haemolysans M341]
          Length = 195

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 9/197 (4%)

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L ++ V  G  +RFG    G   ++    E+ G   + +   +    + +S++ ++  
Sbjct: 2   KKLNIEKVFCGFDYRFGNKGLGTPKLI----EENGIE-ISVQNEQTIDGEKISTTVLKKF 56

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLK--EGVYAIRFR 231
           +  G         G  ++I   V+ G ++GRT+ FPTAN+QLS   LL    GVY  + +
Sbjct: 57  VRDGEFQKYREYSGRFYSISGLVVKGRQLGRTINFPTANLQLSEKYLLPETNGVYITKLK 116

Query: 232 TQDQTSYSGVANFGRNPTMVPNG-PLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
                 Y  + N G NPT+        +E+ I DF ++IYG++  + F+++LR E KF+ 
Sbjct: 117 VHS-EIYKSITNIGYNPTVSTEKNKKFIETHILDFDEDIYGEKIEIFFYEFLRKEQKFES 175

Query: 291 IEKLKIYMGEDEKKARK 307
            + LK  +  D+K + +
Sbjct: 176 FDHLKEQLKLDKKTSEE 192


>gi|299822207|ref|ZP_07054093.1| riboflavin kinase/FMN adenylyltransferase [Listeria grayi DSM
           20601]
 gi|299815736|gb|EFI82974.1| riboflavin kinase/FMN adenylyltransferase [Listeria grayi DSM
           20601]
          Length = 244

 Score =  171 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 18/234 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP-ITVLSFNPHP 59
           M + H   ++ +     +  V+ IG FDG+HLGH  IL+QA+K+   S  +  +SF+PHP
Sbjct: 2   MEITH---VDFAPTIDKRPAVLTIGKFDGVHLGHQYILKQALKLKQPSEILATISFSPHP 58

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        ++PP  +   L   G   L    FT   A  S E+F+ + L   L +
Sbjct: 59  LWALKRMEDYREMITPPREKAYWLGHYGVDRLFETAFTAAYAETSPEEFVCEHLAN-LNL 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G +F FGK R  D  +L+   E +G   V +  +  N  + +SS+ IR+ L +G 
Sbjct: 118 SHICVGEEFNFGKGRHSDVELLRDLAEPFGIKVVAVPVVPMNN-EKISSTYIRSLLRRGA 176

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT 232
              A  LLG+ + +   V  G                   +L   G Y      
Sbjct: 177 FKEAERLLGHAWYVNGVVKDGVIADEE-----------DYVLPLPGEYETLEHG 219


>gi|149006213|ref|ZP_01829925.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae SP18-BS74]
 gi|147761990|gb|EDK68952.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Streptococcus pneumoniae SP18-BS74]
          Length = 175

 Score =  171 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 4/169 (2%)

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +   + +    + +  + + K + +SS+ IR A+  G+V  A  LLG        V+HG 
Sbjct: 9   EDLKDYFDGEVIIVPPVEDEKGK-ISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGN 67

Query: 201 KIGRTLGFPTANM-QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLE 259
             GRT+G+PTAN+  L    +  +GVY +    Q +  Y  +A+ G+N T         E
Sbjct: 68  ARGRTIGYPTANLVLLDRTYMPADGVYVVDVEIQ-RQKYRAMASVGKNVTF-DGEEARFE 125

Query: 260 SFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
             IFDF+Q+IYG+   V + D +R   KF  +++L   +  DE+  R  
Sbjct: 126 VNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW 174


>gi|315638278|ref|ZP_07893459.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis JV21]
 gi|315481625|gb|EFU72248.1| riboflavin biosynthesis regulatory protein (ribC) [Campylobacter
           upsaliensis JV21]
          Length = 282

 Score =  171 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 29/292 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FDGIHLGH  ++++      N  + V+          +  +    LS    ++++
Sbjct: 16  LAIGCFDGIHLGHLELIKRL---DLNGALLVI-------NKFKGEN----LSDFKQKQEL 61

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            ++    A+   +F  +     A+ F+  +  E+  ++ ++ G  F FG ++      ++
Sbjct: 62  SKR----AIFTLEF-EKIRYLKAQDFLHLLRQEFKFLEHIVVGYDFVFGHNKEAKAFDIE 116

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +     G  T  + E + +    V +S I+  L +G V  A   LG +++I++ VI G+ 
Sbjct: 117 RLS---GIKTSIVPEFKLD-GLSVHASLIKDFLARGEVKKAERFLGRKYSIKARVIRGQG 172

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           +G+   F T N++     L K GVYA   +   +  +  V+  G   T   +    +E+ 
Sbjct: 173 LGKKELFATLNLRNCNYFLPKNGVYASMIKI-GEECFKSVSFLGVRST---DLAFSIETH 228

Query: 262 IFDFSQEIY--GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           I +  ++I    +   + F ++LR    F D++ LK  + +D +K ++IL +
Sbjct: 229 ILENFEKIVQLDEEVELFFVEFLRENESFSDLKALKQKISQDIEKTKEILGN 280


>gi|295705688|ref|YP_003598763.1| FAD Synthetase [Bacillus megaterium DSM 319]
 gi|294803347|gb|ADF40413.1| FAD Synthetase [Bacillus megaterium DSM 319]
          Length = 181

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 12/179 (6%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           L   V+AIG FDG+H GH  +++QA+  +     P  V +F+P PR   Q       L+ 
Sbjct: 11  LPASVIAIGAFDGVHQGHQAVIKQAVTRSKALKVPSVVYTFDPPPRFHFQQDQ---VLTS 67

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              +  ++ ++G    +   F    A   +  FI  +  + L    +I G  FRFG++R 
Sbjct: 68  IDQKVNLIAELGVDYAVIIHFDELYAKRPSIDFISNL--KKLNPSEIIVGNDFRFGRNRE 125

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           GD  +L K      F    I  +   +   +SS+ IR  + +G +  +  LLG+    E
Sbjct: 126 GDIKLLAKH-----FLVDIIPPVCCAEGTRISSTRIRQLIQQGAIDQSNDLLGWSLQKE 179


>gi|291513944|emb|CBK63154.1| FAD synthase [Alistipes shahii WAL 8301]
          Length = 187

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 11/195 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M VFH  +   +LP+ ++   V +G++DG+HLGH  ++ + I  A        VL+F PH
Sbjct: 1   MRVFHGFD---ALPHFVRP-AVTVGSYDGVHLGHRALIGRLIAEARANGGESIVLTFEPH 56

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR  +  +  +  L+    +  +LE++G   +I   F    +  S E+F    L+  +  
Sbjct: 57  PRITLGKAEGLRLLTTLDEKTALLEELGVDNVIVIPFDRAFSALSGEEFADDYLIGKVGA 116

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +T++ G   RFG DR  D   L   G       V +   R +  + VSS+ IR  L +G 
Sbjct: 117 ETLVAGYNHRFGHDRI-DCDTLAASGR---LRVVKVGPCRVD-GEHVSSTVIRRLLDEGK 171

Query: 179 VLNAAHLLGYRFTIE 193
              A  LLGY    E
Sbjct: 172 TAEAELLLGYSLQTE 186


>gi|289765907|ref|ZP_06525285.1| LOW QUALITY PROTEIN: riboflavin kinase [Fusobacterium sp. D11]
 gi|289717462|gb|EFD81474.1| LOW QUALITY PROTEIN: riboflavin kinase [Fusobacterium sp. D11]
          Length = 198

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 5/182 (2%)

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           F FGK   G    L+   E +      +  +     ++VSSS IR  +       A  LL
Sbjct: 4   FSFGKGGVGKAEDLEYLAEIHNIKVTELPPV-TLDGELVSSSAIRKKIANSDFDGAVKLL 62

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ--TSYSGVANF 244
            +   I  +VIHG+KI R LGFPT N+++   +    G+Y    +  D+      GV N 
Sbjct: 63  DHPMIIIGEVIHGKKIARELGFPTTNIKMDNRLYPPSGIYGAFLQVGDKNSKVLYGVVNV 122

Query: 245 GRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           G NPT+     + LE  I DF++E+YG++  +    ++R E KF  I++LK  +  D  +
Sbjct: 123 GYNPTLK--HEMSLEVHILDFNREVYGEKVYIQIVKFMRKEKKFSSIDELKATIQADVDR 180

Query: 305 AR 306
            +
Sbjct: 181 WK 182


>gi|224418370|ref|ZP_03656376.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|313141900|ref|ZP_07804093.1| bifunctional riboflavin kinase/FAD synthase RibF [Helicobacter
           canadensis MIT 98-5491]
 gi|313130931|gb|EFR48548.1| bifunctional riboflavin kinase/FAD synthase RibF [Helicobacter
           canadensis MIT 98-5491]
          Length = 294

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 72/303 (23%), Positives = 118/303 (38%), Gaps = 46/303 (15%)

Query: 20  GVVAIGNFDGIHLGHHLILEQA--------IKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             +A+G FDG+H+ H  I +          I+      +      P P     +  PI+ 
Sbjct: 17  TSIALGKFDGMHIAHQEIFKALDHQGVILCIETNRGELL------PKPYRDFYTHFPIYH 70

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L    ++EK             +F                      +K ++ G  FRFGK
Sbjct: 71  LDLNIVKEKN----------DIEFVKFLMEILP------------NLKRIVVGYDFRFGK 108

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
           DR      L+K  +      + IDE+   K   V S  I+  L  G++  A  LLG  F 
Sbjct: 109 DRNYYTFDLKKHFKG---EVIVIDEVFY-KKLSVHSGLIKELLINGNLKLANKLLGREFE 164

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS----YSGVANFGRN 247
           I+  +I G+ IGR   + T N++    +L +EGVYA   +   Q+     Y  V   G  
Sbjct: 165 IQGKIIKGQGIGRKQLYATINLENDGFLLPQEGVYAGFIQLGKQSHITPKYPAVIFIGNR 224

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
             +  +    +E  +     E+   +    F+  +R    F  +E LK  + +D  +A K
Sbjct: 225 --VSTDKSFAIEGHLLGIELEVQTTKAGFYFYRKIRENEYFDTLEALKEQIKQDINQAYK 282

Query: 308 ILE 310
           +L+
Sbjct: 283 LLK 285


>gi|302526944|ref|ZP_07279286.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
 gi|302435839|gb|EFL07655.1| riboflavin biosynthesis protein RibF [Streptomyces sp. AA4]
          Length = 299

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 22/235 (9%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRT 61
           +H       +P+     VVA+G FDG+H GH  +L++A+++       V+  +F+PHP T
Sbjct: 60  WHG---TAEVPDGWGPSVVALGVFDGLHRGHQRVLDRAVRLGRERGAPVVLTTFDPHPAT 116

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           I         ++    + ++  + G   ++   FT   A  SAE+F+  VLV  L+   V
Sbjct: 117 IAGRPRDTTPVATVEHRAELARRHGADQVLVLPFTECLARTSAEEFVADVLVRALDATAV 176

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +TG+ FRFG   AGD  +L+K G   GF    ++ L        SS+ +RT +T G ++ 
Sbjct: 177 VTGSNFRFGHRGAGDPALLRKLGHVSGFTAHAVELL-----PGCSSTLVRTLVTAGDLVG 231

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           AA +LG    +   V         +  P   +      L   G Y  R    D+T
Sbjct: 232 AAAILGRPHRVHGTVR------GEIVTPCTTL------LPPPGKYWARTPYGDRT 274


>gi|229155680|ref|ZP_04283787.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 4342]
 gi|228627792|gb|EEK84512.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 4342]
          Length = 182

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTKSIVSIGAFDGVHRGHQAVIKNAVEKAKVLRITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAK---VLTPIDEKVKRIQSLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  F+FGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  + +G 
Sbjct: 113 VEIFVGQDFKFGKNREGNIDLLREH-----FNISIVKDICCDEGERISSTRIRDYVYQGD 167

Query: 179 VLNAAHLLGYRF 190
           +  +  LLG+ F
Sbjct: 168 LQKSNSLLGWSF 179


>gi|42781216|ref|NP_978463.1| riboflavin biosynthesis protein, truncated [Bacillus cereus ATCC
           10987]
 gi|42737138|gb|AAS41071.1| riboflavin biosynthesis protein, truncated [Bacillus cereus ATCC
           10987]
          Length = 182

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTKSIVSIGAFDGVHKGHQAVIKNAVEKAKVLRITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAK---VLTPIDEKVKRIQSLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  F+FGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  + +G 
Sbjct: 113 VEIFVGQDFKFGKNREGNIDLLREH-----FNISIVKDICCDEGERISSTRIRDYVYQGD 167

Query: 179 VLNAAHLLGYRF 190
           +  +  LLG+ F
Sbjct: 168 LQKSNSLLGWSF 179


>gi|229196329|ref|ZP_04323077.1| Riboflavin biosynthesis protein [Bacillus cereus m1293]
 gi|228587183|gb|EEK45253.1| Riboflavin biosynthesis protein [Bacillus cereus m1293]
          Length = 182

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+    + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAQ---VLTTIDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 113 VEIFIGQDFRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYIYHGD 167

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 168 LQKSSSLLGWSF 179


>gi|229172787|ref|ZP_04300342.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
 gi|228610675|gb|EEK67942.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
          Length = 182

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTKSIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P   + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAQ---VLTPIDEKVKRIQNLGVEHVIVIQFDESYLTKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 113 VEIFIGQDFRFGKNREGNIELLREH-----FNISIVKDVCCDEGERISSTRIRDYVYHGD 167

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 168 LQKSSSLLGWSF 179


>gi|196046046|ref|ZP_03113274.1| riboflavin kinase (Flavokinase) [Bacillus cereus 03BB108]
 gi|225864044|ref|YP_002749422.1| riboflavin kinase [Bacillus cereus 03BB102]
 gi|228914685|ref|ZP_04078294.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229091079|ref|ZP_04222302.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|229184303|ref|ZP_04311510.1| Riboflavin biosynthesis protein [Bacillus cereus BGSC 6E1]
 gi|196023101|gb|EDX61780.1| riboflavin kinase (Flavokinase) [Bacillus cereus 03BB108]
 gi|225790442|gb|ACO30659.1| riboflavin kinase [Bacillus cereus 03BB102]
 gi|228599099|gb|EEK56712.1| Riboflavin biosynthesis protein [Bacillus cereus BGSC 6E1]
 gi|228692210|gb|EEL45946.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|228845004|gb|EEM90046.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 182

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+    + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAQ---VLTTIDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 113 VEIFIGQDFRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYVYHGD 167

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 168 LQKSSSLLGWSF 179


>gi|218512929|ref|ZP_03509769.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli 8C-3]
          Length = 125

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/124 (52%), Positives = 88/124 (70%)

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           K+GR LGFPTANM+L P+  L  G+YA+RFR QD T +  VA++GR PT+  NG  LLE+
Sbjct: 1   KLGRQLGFPTANMRLPPEAELAAGIYAVRFRRQDGTLHDAVASYGRRPTVTENGAPLLET 60

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
           ++FDFS ++YGQ C VSFF Y+RPE+KF  ++ L   +  DE++AR +L    PL E DR
Sbjct: 61  YLFDFSGDLYGQLCAVSFFGYMRPELKFDGLDPLVAQIKRDEEEARALLAGVKPLGELDR 120

Query: 321 IICF 324
            +CF
Sbjct: 121 KLCF 124


>gi|196039657|ref|ZP_03106961.1| Riboflavin kinase [Bacillus cereus NVH0597-99]
 gi|196029360|gb|EDX67963.1| Riboflavin kinase [Bacillus cereus NVH0597-99]
          Length = 182

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+    + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAQ---VLTTIDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 113 VEIFIGQDFRFGKNREGNIELLREH-----FNLSIVKDVCCDEGERISSTRIRDYVYHGD 167

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 168 LQKSSSLLGWSF 179


>gi|307718801|ref|YP_003874333.1| riboflavin biosynthesis protein RibF [Spirochaeta thermophila DSM
           6192]
 gi|306532526|gb|ADN02060.1| riboflavin biosynthesis protein RibF [Spirochaeta thermophila DSM
           6192]
          Length = 263

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           SLP + +   V IG FDG+HLGH         ++++    V++F+ +P  +         
Sbjct: 15  SLPRNPEDSAVTIGVFDGVHLGHQE--LLETLLSSSLHPLVITFDKNPEELFSPDKRYER 72

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +   + +MG   ++   F+ + +     +F+++V ++   +K ++ G  FR G+
Sbjct: 73  LTSLRQKVSRIREMGIPDVLVIDFSRDFSTIEGREFLERV-IDVTRMKRLLVGKDFRCGR 131

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             A      ++   + G   V ++++  N ++ VSS+ IR  + +G +  A  +LG   T
Sbjct: 132 GGAVGIAEAEELCARRGVELVVMEDVTQNGTR-VSSTEIRKRILEGELDAAEQMLGRPHT 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS---YSGVANFGRNP 248
           ++   + GE  G TL  P   +   P IL   G YA R    +      +        +P
Sbjct: 191 LDLRGLVGEGRG-TLCIPRWKI---PQILPPPGEYAGRGTGGEPLRISIHPS--EIWISP 244

Query: 249 TMVPNGPLLLESFIFDFSQE 268
            +       LE  I     E
Sbjct: 245 -LDERDSSSLEVMILHKQGE 263


>gi|300118215|ref|ZP_07055963.1| riboflavin kinase [Bacillus cereus SJ1]
 gi|298724526|gb|EFI65220.1| riboflavin kinase [Bacillus cereus SJ1]
          Length = 182

 Score =  164 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 1   MSIIYIHE--QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+    + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 58  PRSYFQGAQ---VLTTIDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L++      F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 113 VEIFIGQDFRFGKNREGNIELLREH-----FNISIVKDVCCDEGERISSTRIRDYVYHGD 167

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 168 LQKSSSLLGWSF 179


>gi|118477512|ref|YP_894663.1| riboflavin biosynthesis protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416737|gb|ABK85156.1| riboflavin biosynthesis protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 194

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  L   +V+IG FDG+H GH  +++ A++ A    I   V +F+P 
Sbjct: 13  MSIIYIHE--QCIPE-LTESIVSIGAFDGVHKGHQAVIKNAVEKAKALKITNVVYTFDPP 69

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+    + K ++ +G   +I  +F       SA  FIQ   ++ L  
Sbjct: 70  PRSYFQGAQ---VLTTIDEKVKRIQNLGVEHVIVIRFDESYITKSASCFIQD--IKRLSP 124

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L+++     F+   + ++  ++ + +SS+ IR  +  G 
Sbjct: 125 VEIFIGQDFRFGKNREGNIELLREQ-----FNLSIVKDVCCDEGERISSTRIRDYVYHGD 179

Query: 179 VLNAAHLLGYRF 190
           +  ++ LLG+ F
Sbjct: 180 LQKSSSLLGWSF 191


>gi|229017402|ref|ZP_04174305.1| Riboflavin biosynthesis protein [Bacillus cereus AH1273]
 gi|229023578|ref|ZP_04180073.1| Riboflavin biosynthesis protein [Bacillus cereus AH1272]
 gi|228737740|gb|EEL88241.1| Riboflavin biosynthesis protein [Bacillus cereus AH1272]
 gi|228743965|gb|EEL94064.1| Riboflavin biosynthesis protein [Bacillus cereus AH1273]
          Length = 176

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 15/189 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  E  Q +P  +K  +V+IG FDG+H GH  +++  ++ A    I   V +F+P 
Sbjct: 1   MRIIYIHE--QCIPELMK-SIVSIGAFDGVHKGHQTVIKNTVEKAKELKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P   + K L+ +G   +I  +F       SA  F+Q +  + L  
Sbjct: 58  PRSYFQGAQ---ILTPIEEKVKRLQNLGVEHVIVIRFDESYITKSASCFVQDL--KRLNP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R G+  +L++      F+   + ++   + + +SS+ IR  +  G 
Sbjct: 113 VDIYIGQDFRFGKNREGNIELLREH-----FNISIVKDVCCEEGERISSTRIRNYVCHGE 167

Query: 179 VLNAAHLLG 187
           +  ++ LLG
Sbjct: 168 LQKSSALLG 176


>gi|294502569|ref|YP_003566631.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
 gi|294353028|gb|ADE63369.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis Z176003]
          Length = 127

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R GD   
Sbjct: 62  KYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGDFST 121


>gi|312110662|ref|YP_003988978.1| FAD synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215763|gb|ADP74367.1| FAD synthetase [Geobacillus sp. Y4.1MC1]
          Length = 285

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPP 75
             V A+G FDG+HLGH  +++   K+A        V+SF PHP+ II      +  L PP
Sbjct: 19  PAVAALGFFDGVHLGHQKVIQTTKKLAEKMGLKTAVISFFPHPKEIIGKTGERVHYLLPP 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + K   ++G       +FT E A    ++F+QK L+  L++K  + G  F +G+   G
Sbjct: 79  AEKAKKFSRLGVDYFYLIRFTPEFARLEPKEFVQKYLIP-LQIKHAVAGYDFSYGRKGKG 137

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +  ++++    Y      ++ ++ N  + +SS+ IR  +  G +      LG  +  +  
Sbjct: 138 NLAMMEE-DSGYSITVTKVEHVKRND-EKISSTLIRNKIRLGLMEELPDYLGEFYETKGK 195

Query: 196 VIHGEKIGRTL 206
           +I  +     L
Sbjct: 196 MICTDGKDELL 206


>gi|229085072|ref|ZP_04217323.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-44]
 gi|228698197|gb|EEL50931.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-44]
          Length = 182

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +   I+ +    L   +V+IG FDG+H GH  ++  A++ +    I   V +F+P 
Sbjct: 1   MKIIY---IHDNYVPKLIKSIVSIGAFDGVHKGHQTVIRNAVEKSQELKITNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PRT  Q       L+    +    + +G   ++  +F       +A  FIQ++  + L  
Sbjct: 58  PRTYFQGDE---VLTSIDEKLNRFQDLGVERVVVNRFDESYVTRTASHFIQEL--QRLCP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R GD  +L K      F    ++E+     + +SS+ IR  L +G 
Sbjct: 113 AGIYVGEDFRFGKNREGDIELLMKY-----FAVSIVEEICCEGGERISSTRIRNHLFQGE 167

Query: 179 VLNAAHLLGYRF 190
           +  +  LLG+  
Sbjct: 168 LQRSHSLLGWPI 179


>gi|262364545|gb|ACY61102.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D182038]
          Length = 186

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           + IGNFDG+H GH  +LEQ  +       P+ V+ F P P  +  +      L+    + 
Sbjct: 2   LTIGNFDGVHRGHQALLEQLKREGQRLGLPVMVMIFEPQPLELFAADKAPARLTRLRDKA 61

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           K L + G   L+  KF    A  +A+ F+ ++LVE L VK +  G  FRFG  R G    
Sbjct: 62  KYLAQAGVDYLLCVKFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDDFRFGAGRQGIFNY 121


>gi|327438122|dbj|BAK14487.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 270

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 17/234 (7%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRT 61
           F N +    +       V+A+G FDGIHLGH  +++ A +       P+ V+SF PHP  
Sbjct: 5   FINSQNLHLIQKQATSCVMALGYFDGIHLGHQQVIKTAREEANKRGLPLAVMSFRPHPIN 64

Query: 62  IIQSSSPI-FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           ++     I   L+ P  +EK L+++G        FTL  A  ++ QF++  L+  L V  
Sbjct: 65  VLSKGQSIVPHLTTPCEKEKRLKQLGVDLFYLVDFTLAFAALTSSQFVEDYLM-KLGVVH 123

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            + G  F +G    G   + Q   +  G  TV   E  +   + +SSS IR  L    V 
Sbjct: 124 AVAGFDFSYGVK--GVAKLSQIVADSNGEITVTKVECIDYDGEKISSSAIRQRLLAAAVH 181

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
              H LG  F  +   +H +             Q+   +L   G+Y +     +
Sbjct: 182 EIPHFLGDHFNSK---VHWDGNKF--------QQIEKTMLPSAGIYKVILELPN 224


>gi|255292713|dbj|BAH89819.1| riboflavin biosynthesis protein RibF [uncultured bacterium]
          Length = 276

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS 73
            L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++     L 
Sbjct: 97  SLDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVYTFDPPPRVAFGAAEK---LI 153

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + + L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+DR
Sbjct: 154 DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELA--ALSPVALWVGDDFRFGRDR 211

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           AGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG++   
Sbjct: 212 AGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGWQQPW 265


>gi|255292447|dbj|BAH89564.1| riboflavin kinase/FMN adenylyltransferase [uncultured bacterium]
          Length = 276

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS 73
            L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++     L 
Sbjct: 97  SLDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVCTFDPPPRVAFGAAEK---LI 153

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + + L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+DR
Sbjct: 154 DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELA--ALSPVALWVGDDFRFGRDR 211

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           AGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG++   
Sbjct: 212 AGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGWQQPW 265


>gi|332712381|ref|ZP_08432308.1| FAD synthase [Lyngbya majuscula 3L]
 gi|332348855|gb|EGJ28468.1| FAD synthase [Lyngbya majuscula 3L]
          Length = 353

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 32/218 (14%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI------------------------ 42
           + I  SL   L    VA+GNFDG+HLGH  ++   +                        
Sbjct: 1   MWITSSLTTALTPTAVALGNFDGVHLGHQQVIAPILPKPVTAQAQALTSSNLEQFSNPET 60

Query: 43  ---KIANNSPI---TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFT 96
               +  N  +   TV +FNPHPR    S      L+PP+ + + L  +G   L    F 
Sbjct: 61  TGPNLDPNLELIYPTVATFNPHPREFF-SGQAWKLLTPPTEKAQQLSALGVQQLALLPFN 119

Query: 97  LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156
            E A+ S ++F++K+LVE L+ + V  G  F FG  RAG    L      YG     +  
Sbjct: 120 RELASLSPQEFVEKILVEQLQAQQVSVGEDFCFGHKRAGTATDLDAIASAYGITVHIVSL 179

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
            +    +I SSS    +L +G +  A   LG  +T+  
Sbjct: 180 YKRQDQRISSSSIR-QSLAQGDIDKANRFLGRPYTLIG 216


>gi|327441745|dbj|BAK18110.1| FAD synthase [Solibacillus silvestris StLB046]
          Length = 261

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 21/231 (9%)

Query: 1   MHVFHNIEINQSL-PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +    E N  +   + +  V+A+G FDG+H GH  ++  A K A      + V+SF P
Sbjct: 1   MKIIIVNENNLPIVQQNSEPAVIALGFFDGVHKGHQEVILAARKKARKNGLKLAVMSFFP 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           HP+T+  +   +  L P   + +  + +G        FT   A    +QF+Q+ LV  L+
Sbjct: 61  HPKTVFSNEE-VDYLMPMEKKAERFQSLGVDLFYIVDFTKLFAALQPKQFVQQYLV-GLQ 118

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V+  + G  + +G   AG    +    +      V I +  +   + VSS+ IR  L +G
Sbjct: 119 VQYAVAGFDYTYGAKGAGTTATIHSDSDCKII--VDIVKRFSISGKKVSSTCIREKLKRG 176

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAI 228
           +V     LLG  ++++  + +G                    L + G Y +
Sbjct: 177 YVEEVTALLGKPYSVQYSMENGLHDY--------------YTLPQCGEYYV 213


>gi|126731664|ref|ZP_01747469.1| riboflavin biosynthesis protein, truncated [Sagittula stellata
           E-37]
 gi|126707830|gb|EBA06891.1| riboflavin biosynthesis protein, truncated [Sagittula stellata
           E-37]
          Length = 204

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS 65
            I       L   V+AIG FDG+H GH  ++  A+  A    +   V +F+P P+ +   
Sbjct: 9   RIVTDEQAALPACVMAIGAFDGVHRGHQALIRGAVAEARAAQTASVVWTFDPPPKVVFGR 68

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           ++    L P   +   + ++G   ++  +F    A  SA++F+  +    L  +T+  G 
Sbjct: 69  AAQ---LCPLEEKLARIARLGPDMIVVARFDRLYAGRSADRFLSDLA--RLNPRTIHVGA 123

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG  ++GD  +L      + F       +     + VSS+ IR     G +  A  L
Sbjct: 124 DFRFGHRQSGDTALL-----SHHFKVNIAQPVICAAGETVSSTRIRALRASGRLTEARAL 178

Query: 186 LG 187
            G
Sbjct: 179 QG 180


>gi|315185934|gb|EFU19698.1| cytidyltransferase-related domain protein [Spirochaeta thermophila
           DSM 6578]
          Length = 263

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
           SLP + +   V IG FDG+HLGH         ++++    V++F+ +P  +         
Sbjct: 15  SLPRYPEDSAVTIGVFDGVHLGHRE--LLETLLSSSLHPLVITFDKNPEELFSPDKRYER 72

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           L+    +   + + G   ++   F+ + +     +F+++V ++   +K ++ G  FR G+
Sbjct: 73  LTSLRQKVSRIRETGIPDVLVIDFSRDFSTIEGREFLERV-IDVTRMKRLLVGKDFRCGR 131

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             A      ++   + G   V ++++  N ++ VSS+ IR  + +G +  A  +LG   T
Sbjct: 132 GGAVGIAEAEELCTRRGVELVVMEDVTQNGTR-VSSTEIRKRILEGELDAAERMLGRPHT 190

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS---YSGVANFGRNP 248
           ++   + GE  G TL  P   +   P IL   G Y  R    +      +        +P
Sbjct: 191 LDLRGLAGEGRG-TLCIPRWKI---PQILPPPGEYPGRGTGGEPFRIVIHPS--EIWISP 244

Query: 249 TMVPNGPLLLESFIFDFSQE 268
            +       LE  I     E
Sbjct: 245 -LDERDSSSLEVMILHEQGE 263


>gi|255292765|dbj|BAH89870.1| riboflavin kinase [uncultured bacterium]
 gi|255292907|dbj|BAH90006.1| riboflavin kinase [uncultured bacterium]
 gi|255293183|dbj|BAH90274.1| riboflavin kinase [uncultured bacterium]
          Length = 286

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLS 73
            L   VV IG FDG+H GH  ++E  ++ A     P  V +F+P PR    ++     L 
Sbjct: 56  SLDASVVTIGAFDGVHRGHQALIEVFVRQARELGVPAVVYTFDPPPRVAFGAAEK---LI 112

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
               + + L  +G   ++   FT E    S  +FI+++    L    +  G  FRFG+DR
Sbjct: 113 DTRERIRRLRFLGADHIVLAHFTTEYRQRSPLEFIEELA--ALSPVALWVGDDFRFGRDR 170

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           AGD  +L +      F    + ++  +  + VSSS IR    +G    A  LLG++   
Sbjct: 171 AGDTALLARH-----FDLQLLPKVVCSGGERVSSSRIRALFAQGRNAEADTLLGWQQPW 224


>gi|145640633|ref|ZP_01796216.1| hypothetical protein CGSHiR3021_06190 [Haemophilus influenzae
           R3021]
 gi|145274559|gb|EDK14422.1| hypothetical protein CGSHiR3021_06190 [Haemophilus influenzae
           22.4-21]
          Length = 158

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 5/151 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   +    +    L+G  + IGNFDG+HLGH  +L    + A+  N P+ VL F   
Sbjct: 1   MQLIRGL---HNANRVLQGCALTIGNFDGVHLGHQTVLRHLRQKADELNLPMAVLLFESQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L     +   LEK     +I  KF    A   A+ FI++ LV  L V
Sbjct: 58  PREYFMGKNAPARLMRLRDKIYYLEKAKVDVVIVAKFDRTFAEQPADVFIEQTLVNHLHV 117

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           K +  G  F+FG  R G+  +LQ   +++ F
Sbjct: 118 KFLSIGDDFKFGSKRQGNFAMLQAASKRFWF 148


>gi|76664967|emb|CAJ17923.1| riboflavin kinase [Candidatus Phytoplasma solani]
          Length = 141

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 168 SNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYA 227
           + I+  L++G +  A   LG  + I+  VI G++ GR LGF TAN+  S   L   GVYA
Sbjct: 1   TYIKNLLSQGKIKEANLSLGKPYLIQGKVILGQQRGRQLGFRTANLDCSNYFLPLLGVYA 60

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIK 287
           +    + +  Y  +AN G  PT       LLE  +FDF +++YG+  TV F  +LR E K
Sbjct: 61  VLVTYK-RKKYRSIANLGVRPTFDSGNKKLLEVHLFDFEKDLYGKTITVEFVAFLRAEKK 119

Query: 288 FKDIEKLKIYMGEDEKKAR 306
           F ++ +L   +  D   A+
Sbjct: 120 FANVSELIEQIKADIILAK 138


>gi|330941227|gb|EGH44093.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 134

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR      +    L+    + ++L   G   ++   F       SA  F++ VL++ L V
Sbjct: 58  PREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGV 117

Query: 119 KTVITGTKFRFGKDRAG 135
           + +  G  FRFG DR G
Sbjct: 118 QHLEVGDDFRFGFDRVG 134


>gi|212696542|ref|ZP_03304670.1| hypothetical protein ANHYDRO_01080 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676478|gb|EEB36085.1| hypothetical protein ANHYDRO_01080 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 157

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 3/154 (1%)

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS-P 217
            +  +I++S++IR  +  G +  A   LG+ F ++  VI G + GR L FPTAN++ S  
Sbjct: 1   MDDGKIINSTDIRQMVRDGEIEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFK 60

Query: 218 DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVS 277
               K GVY  +    D+  Y  + + G NPT   N  + +E++I DFS+ IYG+  ++ 
Sbjct: 61  YTTAKSGVYFTKVNI-DRDFYYALTDIGTNPTF-ENKEVKIETYIMDFSKNIYGKNISIE 118

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           F +YLRP+ KF   ++L   M +D++  RK++E 
Sbjct: 119 FLEYLRPDYKFNSADELIEQMEKDKETGRKLMEK 152


>gi|325971220|ref|YP_004247411.1| FAD synthetase [Spirochaeta sp. Buddy]
 gi|324026458|gb|ADY13217.1| FAD synthetase [Spirochaeta sp. Buddy]
          Length = 278

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 9/230 (3%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
            V IG FDG+H GH  I+ + +++         V++F+ +P+ I++S      L+  S  
Sbjct: 21  AVCIGVFDGLHSGHQAIIRRCVELAAQQGLESMVITFDKNPKMIMKSQPYHSKLASESQI 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK--DRAGD 136
           E+IL  +G   L+   F+ + +  +AE+F+  ++  +  V  ++ G  FR G     AG 
Sbjct: 81  EQILVNIGVDHLVVIDFSADFSKLTAEEFL-TLVCAFCHVNVMVVGEDFRCGAPVSSAGP 139

Query: 137 RGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             + +         TV I   +     +I SS+ +R  L +G +     +LG  + ++  
Sbjct: 140 VQLQEYLSRLSPEATVEIPPFVLTADGEITSSTLVRKKLLEGALEEVQSMLGRPYELDLV 199

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
               + + + L + TA+      +L   GVY  +    D +     A+ G
Sbjct: 200 AYPSKFMEKGLLYRTASFM---QLLPPVGVYEAQLSLSDGSVVDVHAHLG 246


>gi|138896796|ref|YP_001127249.1| riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268309|gb|ABO68504.1| Riboflavin kinase/FMN adenylyltransferase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 179

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 17/193 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPH 58
           M V    E NQ L   L G VVAIG FDG+H GH  +L QA++ +          + +P 
Sbjct: 1   MKVH---EANQGL--TLPGSVVAIGAFDGVHQGHQAVLRQAVERSRQLGVESVAYTIDPP 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR   Q S     L+    +      +G +  +   F    A    + FI+++    L  
Sbjct: 56  PRCRFQGSR---MLTTLQEKLDRFAVLGLNHAVVAHFDERYAARRVDAFIRELT--ALNP 110

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + VI G  FRFG++R GD  +L++      F    +  +     Q +SS+ IR  + +G 
Sbjct: 111 REVIVGQDFRFGRNREGDVALLRRH-----FPVRIVQTVCCADGQRISSTRIRELIERGE 165

Query: 179 VLNAAHLLGYRFT 191
              +  LLG+  +
Sbjct: 166 WEQSTVLLGWPLS 178


>gi|325970201|ref|YP_004246392.1| riboflavin kinase [Spirochaeta sp. Buddy]
 gi|324025439|gb|ADY12198.1| Riboflavin kinase [Spirochaeta sp. Buddy]
          Length = 230

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 66/291 (22%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +  G FDG+H  H  +L Q        P  V    P  + +         L+    ++ +
Sbjct: 3   IVYGVFDGVHRAHQALLSQ-------KPAIVYVLPPQTKQV---------LTTLEEKQAL 46

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           L                 A  +A     +  V  L  K V                  L 
Sbjct: 47  LTAY--------------AGPTAHIEFVQ-QVPKLSSKKV------------------LS 73

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
            +   YG             +  +SS  I+TAL    + +A  +LGY +T+  +V++G +
Sbjct: 74  LKPMLYG-------------NLPISSERIQTALLAAQIEDAEAMLGYPYTLSGEVVYGRQ 120

Query: 202 IGRTLGFPTANMQLSPD-ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
           +GRT+G PT N++++ + +L   GVY       D   Y GV + G  PT+     + +E+
Sbjct: 121 LGRTVGMPTVNLKIADEKLLPAHGVY-GTITIVDGVRYLGVTSIGLRPTVDNLPHITIET 179

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE--KKARKIL 309
           F+  F++++YGQ  ++    ++RP  KF+ +E ++  + ED     A+ +L
Sbjct: 180 FLLHFNRDLYGQHISLELKTFIRPITKFESLEAVRKKVDEDVHFVMAKNLL 230


>gi|12044997|ref|NP_072807.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|255660295|ref|ZP_05405704.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|1351498|sp|P47391|RIBF_MYCGE RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|3844738|gb|AAC71363.1| riboflavin biosynthesis protein RibF [Mycoplasma genitalium G37]
 gi|166078649|gb|ABY79267.1| riboflavin biosynthesis protein RibF [synthetic Mycoplasma
           genitalium JCVI-1.0]
          Length = 269

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 76/294 (25%), Positives = 119/294 (40%), Gaps = 40/294 (13%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF----TLSPPSIQE 79
           IG FDG+H GH  + + +             F P    ++   +P       L     + 
Sbjct: 6   IGYFDGLHQGHLFLKQNSK------------FEP---MVLLIDNPPLKQTNWLYDLQQRV 50

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             ++     A +   F +   N +A  F ++  ++ L    +I GT + FG D       
Sbjct: 51  AQIKTY-LKATVEV-FDVAKHNMNALSFFEQ-QIKRLNCDEIIVGTDWHFGNDHKDGI-W 106

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           L+K  +    +TV +          +SSS IR  LT   +  A  LL   +     V+HG
Sbjct: 107 LKKLFK----NTVIV------NKTNLSSSVIRNYLTNNELEKANQLLVEPYYRVGTVVHG 156

Query: 200 EKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
            K  R LGFPTAN+ +   +L    G Y +R    +QT Y      G       +  L+ 
Sbjct: 157 LKKARLLGFPTANIVMDNHLLTLNKGSYIVRVLLNNQTFY------GIGFISQKDQDLVC 210

Query: 259 ESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESS 312
           E+ IF+F+ EIYG     +   ++R   KF     L+  +  D   A K LE+ 
Sbjct: 211 ETHIFNFNNEIYGSLVKFTLLKFIRTISKFSSQAALQKAIQSDANFALKWLENQ 264


>gi|331696103|ref|YP_004332342.1| FAD synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950792|gb|AEA24489.1| FAD synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 243

 Score =  151 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 25/254 (9%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
            +E+        +   VAIG FDG+H+GH  ++            TVL+F+PHP  +++ 
Sbjct: 6   TVEVTDDASVRRRPRAVAIGVFDGVHIGHAQVIAGCD--------TVLTFDPHPLQVLRP 57

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                 L+    +   L  +G   ++  +F    A  +A  F+  +LV  L   TV  G 
Sbjct: 58  DDVPALLTTVPTKVARLAALGVREVVVLRFDARWAAVAAPSFVDDLLVGRLGAHTVSVGA 117

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            FRFG    G   +L++ G    F T     +R+     VSSS IR +L+ G +     L
Sbjct: 118 NFRFGAGGEGSGHVLRRDGR---FRTRVTPLVRSAAGV-VSSSRIRASLSSGDIGAVTRL 173

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG    +      G  +    G            +   G Y  R    D  +++ V + G
Sbjct: 174 LGRPHALTGRGAPGRSVVVDTGLA----------VPPAGRY--RVLVNDVPTHAVVDDRG 221

Query: 246 RNPTMVPNGPLLLE 259
              T+       +E
Sbjct: 222 -RITVDEQLRGRVE 234


>gi|7993917|sp|O84990|RIBF_RHOOP RecName: Full=Putative riboflavin biosynthesis protein ribF;
           Includes: RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=FMN
           adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase
 gi|3387793|gb|AAC38800.1| putative FAD synthetase [Rhodococcus opacus]
          Length = 248

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 37/266 (13%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +   VAIG FDG+HLGH  +L            TVL+F+PHP  ++     +  LS    
Sbjct: 18  RQSGVAIGAFDGVHLGHRQVLVGCD--------TVLTFDPHPMHVLAPRPALRLLSDRRT 69

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + + LE +G   +    F    +  +A+ F+++V+++ L    V  G  FRFG    G  
Sbjct: 70  KLRKLEALGIRRVAFIPFDEGWSRVTADDFVERVVIDRLHASRVSVGANFRFGAHGVGTP 129

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
                           +   R   ++ +SS+ IR  +  G++ +A  LLG  F++ +  +
Sbjct: 130 ETFNNYQSLQTRVVQLVQ--RGPGAEPISSTRIRKLVAAGNIEDAIDLLGGPFSLPAVAV 187

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
              ++          +      L   G+Y+ +      +            T +     +
Sbjct: 188 SESRL----------VIADEFALPAPGLYSAQVDGNAVSLR----------TFIEG---V 224

Query: 258 LE-SFIFDFSQEIYGQRCTVSFFDYL 282
           +E +      ++       VSF + +
Sbjct: 225 VELTHPASLQRD---TTVEVSFLNRM 247


>gi|255018488|ref|ZP_05290614.1| hypothetical protein LmonF_13696 [Listeria monocytogenes FSL
           F2-515]
          Length = 135

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-LKEGVYAIRFRTQDQ 235
           G +  A  LLGY +T +  VIHG+K GRT+GFPTAN++++ D L  K GVYA++FR   +
Sbjct: 1   GELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNEDYLIPKLGVYAVKFRVNGE 60

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
           T   G+A+ G N T   +  L +E +I DF +EIYG+   + ++ + RPE+KF  +E L 
Sbjct: 61  THL-GMASIGYNITFKDDQALSIEVYILDFHREIYGEEAEIKWYQFFRPELKFNGVEGLI 119

Query: 296 IYMGEDEKKARKIL 309
             + +DE+  R  L
Sbjct: 120 AQLEKDEQDTRAFL 133


>gi|253827689|ref|ZP_04870574.1| riboflavin biosynthesis protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511095|gb|EES89754.1| riboflavin biosynthesis protein [Helicobacter canadensis MIT
           98-5491]
          Length = 268

 Score =  149 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 111/293 (37%), Gaps = 46/293 (15%)

Query: 30  IHLGHHLILEQA--------IKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +H+ H  I +          I+      +      P P     +  PI+ L    ++EK 
Sbjct: 1   MHIAHQEIFKALDHQGVILCIETNRGELL------PKPYRDFYTHFPIYHLDLNIVKEKN 54

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
                       +F                      +K ++ G  FRFGKDR      L+
Sbjct: 55  ----------DIEFVKFLMEILP------------NLKRIVVGYDFRFGKDRNYYTFDLK 92

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           K  +      + IDE+   K   V S  I+  L  G++  A  LLG  F I+  +I G+ 
Sbjct: 93  KHFKG---EVIVIDEVFY-KKLSVHSGLIKELLINGNLKLANKLLGREFEIQGKIIKGQG 148

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS----YSGVANFGRNPTMVPNGPLL 257
           IGR   + T N++    +L +EGVYA   +   Q+     Y  V   G    +  +    
Sbjct: 149 IGRKQLYATINLENDGFLLPQEGVYAGFIQLGKQSHITPKYPAVIFIGNR--VSTDKSFA 206

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +E  +     E+   +    F+  +R    F  +E LK  + +D  +A K+L+
Sbjct: 207 IEGHLLGIELEVQTTKAGFYFYRKIRENEYFDTLEALKEQIKQDINQAYKLLK 259


>gi|228997180|ref|ZP_04156805.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock3-17]
 gi|229004841|ref|ZP_04162571.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock1-4]
 gi|228756394|gb|EEM05709.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock1-4]
 gi|228762574|gb|EEM11496.1| Riboflavin biosynthesis protein [Bacillus mycoides Rock3-17]
          Length = 182

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  + +      L+  +V+IG FDG+H GH  ++  A++      I   V +F+P 
Sbjct: 1   MRIIYIHDYSVP---ELEKSIVSIGAFDGVHKGHQTVIRNAVEKGKELQIPNVVYTFDPP 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P + +    +++G   +I  +F        A  FIQ++  + L  
Sbjct: 58  PRSYFQGAQ---VLTPINEKLNRFQELGVEHVIVIRFDELYVTRRASYFIQEL--QRLCP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R GD  +L K      F    ++E+   + + +SS+ IR  L +G 
Sbjct: 113 IEIYVGEDFRFGKNREGDIELLMKY-----FDVSIVEEVCCEEGERISSTRIRNHLFQGE 167

Query: 179 VLNAAHLLGYRF 190
           +  +  LLG+  
Sbjct: 168 LQRSQSLLGWPL 179


>gi|257460493|ref|ZP_05625594.1| riboflavin biosynthesis protein RibF [Campylobacter gracilis
           RM3268]
 gi|257441824|gb|EEV16966.1| riboflavin biosynthesis protein RibF [Campylobacter gracilis
           RM3268]
          Length = 460

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 27/248 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            VAIGNFDG+HLGH  + E       +  I V+         +        L+P + ++ 
Sbjct: 132 AVAIGNFDGMHLGHQKLFENL---GEHGAIIVI---------LAGGG--TKLTPFASRQA 177

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
             +K      I Y       + S  +FI  +   ++ ++ ++ G  FRFG+DRA D   L
Sbjct: 178 FTDKK-----IFYCDLRAIKSLSGGEFIALLRQNFINLQKIVVGEDFRFGRDRAWDVEFL 232

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
           +    ++   T  + E   +    V SS I+  L++G    AA LLG  + I   ++ G+
Sbjct: 233 R---REFRGRTCVVGEFCLSGGG-VHSSRIKELLSRGRCEEAAELLGRDYEICGRIVRGQ 288

Query: 201 KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
             G      T N+  S   + K GVYA   R  +   ++ V+  G    +  +G   LE+
Sbjct: 289 GRGAREFVATLNLDASGYFMPKSGVYATLAR-AESKEFASVSFLGHR--LSTDGAFALET 345

Query: 261 FIF-DFSQ 267
            I  DF+ 
Sbjct: 346 HILGDFAG 353



 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 272 QRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +   V F  +LR    F D+ +LK  + +D  +A  +L S
Sbjct: 418 KFVCVKFIKFLRENQNFTDLAQLKEQILKDASEAEAVLRS 457


>gi|3248948|gb|AAD09933.1| riboflavin kinase [Coxiella burnetii]
          Length = 153

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/153 (39%), Positives = 84/153 (54%), Gaps = 3/153 (1%)

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           + L  K V+ G   RFG  RAGD  +L++ GE+Y F  + +  +  +  Q VSS+ +R A
Sbjct: 2   DRLGAKAVVVGDDCRFGAKRAGDYALLKQLGEEYNFKAIEMPSVIYD-GQRVSSTRVRQA 60

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           L  G +     LLG  + +   VI GEK GR LGFPTAN+ L   I    G++ +R    
Sbjct: 61  LQAGDMAVMQALLGRPYRLCGRVIAGEKRGRELGFPTANIDLHRAIAPMSGIFVVRA-FL 119

Query: 234 DQTSYSGVANFGRNPTMVP-NGPLLLESFIFDF 265
           ++ SY GVA+ G  PT    N  LLLE ++F F
Sbjct: 120 NKKSYRGVASLGVRPTFKDENARLLLEVYLFGF 152


>gi|227820992|ref|YP_002824962.1| riboflavin biosynthesis protein RibF [Sinorhizobium fredii NGR234]
 gi|227339991|gb|ACP24209.1| riboflavin biosynthesis protein RibF [Sinorhizobium fredii NGR234]
          Length = 356

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M VFH  E    LP  L GGV+AIGNFDG+H GH  +L +A+  A     P  VL+F PH
Sbjct: 1   MTVFHRNETRDPLPERLHGGVIAIGNFDGVHRGHQSVLNRALDEAKGRGVPALVLTFEPH 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFI 108
           PRT+ +   P+F L+P  ++ +ILE MGF A+I Y F    +  SA +F 
Sbjct: 61  PRTVFRPDQPVFRLTPAPLKARILEGMGFGAVIEYPFDRTFSELSASRFH 110


>gi|228991099|ref|ZP_04151059.1| Riboflavin biosynthesis protein [Bacillus pseudomycoides DSM 12442]
 gi|228768635|gb|EEM17238.1| Riboflavin biosynthesis protein [Bacillus pseudomycoides DSM 12442]
          Length = 182

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 15/192 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPH 58
           M + +  + +      L+  +V+IG FDG+H GH  ++  A++      I   V +F+P 
Sbjct: 1   MRIIYIHDYSVP---ELEKSIVSIGAFDGVHKGHQTVIRNAVEKGKELQIPNVVYTFDPS 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR+  Q +     L+P + +    +++G   +I  +F        A  FIQ++  + L  
Sbjct: 58  PRSYFQGAQ---VLTPINEKLNRFQELGVEHVIVIRFDELYVTRRASYFIQEL--QRLCP 112

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  G  FRFGK+R GD  +L K      F    ++E+   + + +SS+ IR  L +G 
Sbjct: 113 IEIYVGEDFRFGKNREGDIELLMKY-----FDVSIVEEVCCEEGERISSTRIRNHLFQGE 167

Query: 179 VLNAAHLLGYRF 190
           +     LLG+  
Sbjct: 168 LQRPQPLLGWPL 179


>gi|237757138|ref|ZP_04585570.1| Riboflavin kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690705|gb|EEP59881.1| Riboflavin kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 159

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 3/148 (2%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +  V  IGNFDG+H GH  IL++   I   NN    V++F PHPR I+       ++   
Sbjct: 12  EKTVCTIGNFDGVHKGHKEILDKLKNIASENNLKTVVITFYPHPRKILNPQQYKCSIVNL 71

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + ++L++     ++   F         E F+  +  E +  + ++ G  +RFG  R+G
Sbjct: 72  ATKVQLLKEAKIDYILVVDFDKNFYEKQPEDFLNFL-KEKINCEYLVVGKDWRFGYKRSG 130

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQ 163
           D  + +   EK  +  V I+++     +
Sbjct: 131 DINLAKSLEEKLDYKVVIIEDITEENKR 158


>gi|254467720|ref|ZP_05081127.1| Riboflavin kinase [Rhodobacterales bacterium Y4I]
 gi|206684157|gb|EDZ44643.1| Riboflavin kinase [Rhodobacterales bacterium Y4I]
          Length = 188

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSS 67
           ++ +P+ L   VV +G FDG+H GH  ++   ++ A     P  V +F+P P+     ++
Sbjct: 11  HRDVPS-LGASVVTLGAFDGVHSGHQALIAGTVRRARALGVPSVVCTFDPPPKVFFGRAA 69

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
               L P + +   +  +G   ++ + F     + S + F+ ++    L  + +  G  F
Sbjct: 70  Q---LCPLAEKLARISALGPDHVVVFSFGEALRSLSPDAFMTRLA--RLRPQEIRVGGDF 124

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           RFG  +AG   +L +R     F       +R    ++VSS+ IR  L +G
Sbjct: 125 RFGAKQAGGVCLLARR-----FDVHIQPPVRCAAGEVVSSTRIRGLLEQG 169


>gi|330836566|ref|YP_004411207.1| FAD synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748469|gb|AEC01825.1| FAD synthetase [Spirochaeta coccoides DSM 17374]
          Length = 298

 Score =  142 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 16/253 (6%)

Query: 1   MHVFHNIEINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNS-----PITVLS 54
           MH F ++  N   P   +   V+AIG FDGIHLGH LIL++ + +A+          V++
Sbjct: 16  MHDFMSLVAN---PILWQVPMVIAIGVFDGIHLGHQLILKECVSLAHEHTADSWQSMVIT 72

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           FN +P+    S +    L    ++ ++         +   F+ E +  S E+F+  ++  
Sbjct: 73  FNRNPKMTHGSKNNQLPLITARLEHEMFVSFDLDHHVIIDFSDEISKLSGEEFL-GLVCG 131

Query: 115 WLEVKTVITGTKFRFGK-DRAGDRGILQKRGEKY--GFHTVFIDELRNNKSQIVSSSNIR 171
           +  V+ V+ G  FR G  D++     LQ+  ++   G   +     R     + SSS IR
Sbjct: 132 FCSVRAVVVGEDFRCGAPDKSAGPVQLQEYLQRMSPGGQVIVPPFYRTEDGLVASSSRIR 191

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR 231
             L  G++     LLG  ++++            L +  +++     +L   G+Y   FR
Sbjct: 192 ALLLDGNIPGIKPLLGRDYSVDLAPYPFTTQAGCLRYRVSSIA---QLLPPAGMYETVFR 248

Query: 232 TQDQTSYSGVANF 244
             D T+     + 
Sbjct: 249 CLDGTARPAHVSI 261


>gi|257457662|ref|ZP_05622829.1| riboflavin kinase/FMN adenylyltransferase [Treponema vincentii ATCC
           35580]
 gi|257445048|gb|EEV20124.1| riboflavin kinase/FMN adenylyltransferase [Treponema vincentii ATCC
           35580]
          Length = 274

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 6/235 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPH 58
           M + +  ++ +    + +G  V+IG FDG H GH LIL   +K A     P  +++F   
Sbjct: 1   MKIIYWDDLIKEENIYPQGTAVSIGGFDGPHRGHELILSAVLKAAQRKAIPAGIITFFRS 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           PR++   S+    +S   ++ +   + GFS  +   F+ + A      F   +L++ + +
Sbjct: 61  PRSVKAGSTYAGDVSTLEMRLQKFAEQGFSFTVLIDFSADFAKMKGAVFFD-ILIKTICI 119

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K +  G+ F  G       G LQ+   + GF    I++L + + + +SSS IR A+ +  
Sbjct: 120 KYLAVGSDFTCGYRHDTGVGDLQRLARERGFCFDSIEQLYSAQHERISSSAIRQAVEQAD 179

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
              A  LLGY F +  DV        T  + +        IL + G Y+ R   Q
Sbjct: 180 FTLAKDLLGYPFFL--DVAKIVPRRETAVW-SIEKPAVTQILPQNGTYSARAYLQ 231


>gi|15639873|ref|NP_219323.1| riboflavin kinase/FMN adenylyltransferase (ribF) [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189026111|ref|YP_001933883.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum SS14]
 gi|3323205|gb|AAC26578.1| riboflavin kinase/FMN adenylyltransferase (ribF) [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189018686|gb|ACD71304.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum SS14]
 gi|291060247|gb|ADD72982.1| riboflavin kinase/FMN adenylyltransferase [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 275

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 10/252 (3%)

Query: 1   MHVFHNIEINQ-SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI------ANNSPITVL 53
           M +F   ++ + +     +G  +++G FDG H GH  + ++                 ++
Sbjct: 1   MRIFRWSQLQEGACIACDRGAAISVGGFDGPHRGHAFLFDKVFAAACAPVADRARCTGLI 60

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +F   PR   ++SS    LS   ++ +     GF  ++   F+ + A      F   + +
Sbjct: 61  TFTHPPRK-HKTSSYEGDLSTLRLRLRYFRARGFDFVVLIDFSKDFARIPGGVFFNTL-L 118

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             + V  +  G  FR G         L++ G+ + F    +      +   VSSS +R A
Sbjct: 119 RAVRVCYLAVGVDFRCGHGLDTGVRELRRLGDAHSFVCDAVGHY-TLEGVRVSSSAVRRA 177

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           +      +A  LLG  F+++ +VI  ++ G       A        L  EG YA+R    
Sbjct: 178 VRCADFESARRLLGRAFSLDGEVIPWQQSGGCARTLCAERGRVSQTLPPEGEYAVRLVQG 237

Query: 234 DQTSYSGVANFG 245
                    + G
Sbjct: 238 SGVGLRAQLSVG 249


>gi|241765399|ref|ZP_04763371.1| FMN adenylyltransferase [Acidovorax delafieldii 2AN]
 gi|241364876|gb|EER59835.1| FMN adenylyltransferase [Acidovorax delafieldii 2AN]
          Length = 134

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 11/138 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAI--KIANNSPITVLSFNPH 58
           M +F         P   +   + IGNFDG+H GH  +L               VL+F PH
Sbjct: 1   MKIFRGFH----HPGIARACALTIGNFDGVHRGHQAMLALLSSEAAHRGVDSCVLTFEPH 56

Query: 59  PRTII-----QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           PR        +       +     +   L++ G    +   F    A  S + FI +VLV
Sbjct: 57  PRDYFAGVHRKPELAPARIGTLRDKLTELQRCGVQQTVVLPFDARLAAQSPQAFIDEVLV 116

Query: 114 EWLEVKTVITGTKFRFGK 131
             L  + V+ G  FRFG 
Sbjct: 117 RGLGARYVLVGDDFRFGA 134


>gi|196229765|ref|ZP_03128629.1| FAD synthetase [Chthoniobacter flavus Ellin428]
 gi|196226091|gb|EDY20597.1| FAD synthetase [Chthoniobacter flavus Ellin428]
          Length = 152

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 5/145 (3%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP--ITVLSFNPHPR 60
           V   I   ++LP  L    +AIG FDG+HLGH  ++ +A+  A        V++F+PHP 
Sbjct: 11  VLRKIGELRNLPGPLH---LAIGVFDGVHLGHQAVICRALDGARQGGGTAVVVTFDPHPV 67

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++       L+  + + +++  +G +  +   F    A    E FI+++      ++ 
Sbjct: 68  RVLRPEHAPRLLTSTAHKLQLIRDLGVTHQLIIHFDHAFAATPPEDFIRELAAAAQPLQE 127

Query: 121 VITGTKFRFGKDRAGDRGILQKRGE 145
           +  G ++ FGK RAG+  ++++ G 
Sbjct: 128 ICVGFEWCFGKGRAGNLALIERLGR 152


>gi|259416272|ref|ZP_05740192.1| FMN adenylyltransferase [Silicibacter sp. TrichCH4B]
 gi|259347711|gb|EEW59488.1| FMN adenylyltransferase [Silicibacter sp. TrichCH4B]
          Length = 130

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD---QTSYSGV 241
           +LG+   IE +VI GE+ GR LGFPTAN  +        GVYA+     D   + SY G 
Sbjct: 1   MLGHWHRIEGEVIGGEQRGRELGFPTANQSIDGLHPPAFGVYAVLVDVLDGPHKGSYHGA 60

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           A+ G  P    + P  +E+++FDF   +YG   +V   DYLRPE+ F  +E     M  D
Sbjct: 61  ASVGVRPMFDGDQP-NIETYLFDFKGNLYGAHLSVGLVDYLRPEMTFDGLEPFIAQMQAD 119

Query: 302 EKKARKILES 311
             +AR IL++
Sbjct: 120 CDQARAILKT 129


>gi|163784311|ref|ZP_02179220.1| riboflavin biosynthesis protein RibF [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880421|gb|EDP74016.1| riboflavin biosynthesis protein RibF [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 167

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 5/158 (3%)

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS 216
           L    +Q +SSS+IR  L KG + +  HLLG  + +  ++I G KIG  +GFPT N+++ 
Sbjct: 4   LELKGNQKISSSDIREFLKKGKIEDVNHLLGRIYCLTGNIIRGNKIGSKIGFPTINIKVD 63

Query: 217 PDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI---FDFSQEIYGQR 273
            ++ LK GVY           Y  V N+GR PT+      +LE  I   F+    +  ++
Sbjct: 64  ENLCLKTGVYVGYIEV-GNEEYRAVINWGRRPTV-DGKNKVLEVHIIEGFNEKAFLENKK 121

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             V F  Y+R EIKF++I +LK  + +D   + K  E 
Sbjct: 122 PKVYFLHYVRNEIKFENIHQLKEQIKKDILYSLKYFEQ 159


>gi|302542819|ref|ZP_07295161.1| LOW QUALITY PROTEIN: riboflavin biosynthesis protein RibF
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460437|gb|EFL23530.1| LOW QUALITY PROTEIN: riboflavin biosynthesis protein RibF
           [Streptomyces himastatinicus ATCC 53653]
          Length = 131

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKE 223
           VSS+ +R  + +G V  A  +LG    +E  V+ G + GR LGFPTAN++  P   +  +
Sbjct: 1   VSSTLVRRLVAEGDVAGAMEVLGRPHRVEGVVVRGAQRGRELGFPTANLETLPHTAIPAD 60

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYL 282
           GVYA     +   S     + G NP         +E++  D    ++YG    V F  +L
Sbjct: 61  GVYAGWLTAEG-ESMPAAISVGTNPQF-DGTERTVEAYAIDRVGLDLYGLHVEVDFLAFL 118

Query: 283 RPEIKFKDIEKL 294
           R + KF  IE L
Sbjct: 119 RGQEKFDSIEAL 130


>gi|226329208|ref|ZP_03804726.1| hypothetical protein PROPEN_03111 [Proteus penneri ATCC 35198]
 gi|225202394|gb|EEG84748.1| hypothetical protein PROPEN_03111 [Proteus penneri ATCC 35198]
          Length = 112

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 5/107 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   I   Q++     G V+ IGNFDG+H GH  +L+   +       P  V++F P 
Sbjct: 1   MELIRGI---QNIRALHHGCVLTIGNFDGVHRGHQALLKHLKQEASQRGLPTVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
           P            L+    + K L + G   L+  KF  + A  + +
Sbjct: 58  PLEFFLPEKAPARLTRLRDKIKYLAECGIDYLLCVKFDKQFAAQTPQ 104


>gi|302338541|ref|YP_003803747.1| FAD synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635726|gb|ADK81153.1| FAD synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 265

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 101/229 (44%), Gaps = 6/229 (2%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M ++   E  +  P+  +   +++G FDG+H GH L++    +  +     + +F+ +PR
Sbjct: 1   MDIYSWAEFIEDPPHISQQSTISVGVFDGVHAGHKLLISYMERFPHTQKW-IFTFSENPR 59

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            +++S      L     + + L+++G ++++   F+ + +  + + F   + ++ + V  
Sbjct: 60  RLLRSGHFPGDLMTKFQKIEELKRLGITSVVLIDFSNDFSKLTGKDFFTAI-IKRIPVHA 118

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  FR G+  +     ++            I      +++ +SS+ IRTA+ +G  +
Sbjct: 119 VVLGDNFRCGRGGSTSAYDVRDFLTSRNIEV-MIPRPLAWRNRTISSTRIRTAIQEGDFV 177

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           +   +    FT++   +        +   T + +    +L   G Y + 
Sbjct: 178 SVRMMTERAFTLDVADLPQRTGVEAI---TIDKKDVQQVLPPPGSYQVY 223


>gi|167835733|ref|ZP_02462616.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 159

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 61/126 (48%)

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFG 245
           LG+ + I   V HG K+GR LGFPT N+ ++       G++ +           GVA+ G
Sbjct: 13  LGHGYAISGHVTHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVHVHGIAPEPLPGVASLG 72

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
             PT+  +G +LLE  + D+  + YG+   V F   LR E KF D+E L   + +D    
Sbjct: 73  VRPTIDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLARAIAQDVVDT 132

Query: 306 RKILES 311
           R     
Sbjct: 133 RAYFAE 138


>gi|320537766|ref|ZP_08037689.1| riboflavin kinase [Treponema phagedenis F0421]
 gi|320145389|gb|EFW37082.1| riboflavin kinase [Treponema phagedenis F0421]
          Length = 276

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 10/241 (4%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNP 57
           M +F  +  +    P   +G  V+IG FDG H GH L+ E+  + A   N    +++F+ 
Sbjct: 1   MEIFSWDALVKAKAPLITQGAAVSIGGFDGPHRGHVLLFEKVFEAAKKENLKAGLITFSR 60

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            PR      + +  +S   ++ +  E++GF  ++   F+   A     QF   +L++ + 
Sbjct: 61  SPRFKKAGENYVGDVSTLRLRLQKFEELGFDFIVLIDFSCSFARIEGVQFFD-ILLKTIR 119

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++ +  GT FR G         L + G + GF    I +L    +  +SSS +R A+ K 
Sbjct: 120 IRYLAVGTDFRCGYRLDTGVHELIQLGSEQGFRFDSIGQLTAANNLRISSSAVRVAVEKA 179

Query: 178 HVLNAAHLLGYRF--TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
               A  LLGY F   I+      E+   +       ++    IL  +G Y+++    D+
Sbjct: 180 DFTLAKDLLGYPFLLDIKDVFTPDEQKVCSYKA----VKQITQILPPDGRYSVKVFLTDK 235

Query: 236 T 236
           T
Sbjct: 236 T 236


>gi|291515855|emb|CBK65065.1| FAD synthase [Alistipes shahii WAL 8301]
          Length = 490

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
              L  R  IE  V HG ++GR LGFPTAN+ +  D+   +GVY  R        Y  ++
Sbjct: 366 RKNLMERILIEGVVEHGRRLGRELGFPTANLAVPEDVAAADGVYRSRAEVGG-KVYDAMS 424

Query: 243 NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
           N GRNP++       LE+ IFDF  E+YG+R  V   + +R E +F  +E+L+  +  D+
Sbjct: 425 NLGRNPSVGGV-ERRLETHIFDFRGELYGRRLRVELLEKIRDERRFASVEELRGQIARDK 483

Query: 303 K 303
           +
Sbjct: 484 E 484


>gi|238020505|ref|ZP_04600931.1| hypothetical protein GCWU000324_00387 [Kingella oralis ATCC 51147]
 gi|237867485|gb|EEP68491.1| hypothetical protein GCWU000324_00387 [Kingella oralis ATCC 51147]
          Length = 122

 Score =  132 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           HG+K+GRT+G PTAN+ L        GV+ +R +       +GVA+FG NPT+       
Sbjct: 3   HGKKLGRTIGCPTANVHLPLHCYSLSGVFVVRAKG-SFGECAGVASFGTNPTVSHTPEAK 61

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           LE  +FDFS  +YG+R  V+F   LR E KF  I  L+  + +D + AR   ++
Sbjct: 62  LEVHLFDFSGCLYGERIQVTFLHKLRDEAKFDSIADLQAQIAQDIETARAWYQA 115


>gi|241766698|ref|ZP_04764538.1| Riboflavin kinase [Acidovorax delafieldii 2AN]
 gi|241362966|gb|EER58655.1| Riboflavin kinase [Acidovorax delafieldii 2AN]
          Length = 167

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 26/166 (15%)

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLG---------FPTANMQLSPDILLKEGVYAIRFRT 232
           AA LLG  +TI   V+HG K+GR LG         F T N++ +       G++A+    
Sbjct: 2   AARLLGRPYTISGHVVHGRKLGRALGASTADAADGFRTLNLRFAHWKPAASGIFAVLVHG 61

Query: 233 QDQTSYSGVANFGRNPTMVP----NGPLLLESFIFDFSQEI-----YGQRCTVSFFDYLR 283
               +  GVAN G  P++ P     G +LLE+    +  ++     YG+   V     L 
Sbjct: 62  LGDGALPGVANLGVRPSLDPADVNGGRVLLETHCLTWPADLGPEGAYGKIIRVELLHKLH 121

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE--------RDRI 321
            E+K+  ++ L   + +D   AR    S++  S         RDRI
Sbjct: 122 DELKYDGLDALTAGIAKDCADARAYFASAHTSSHTETRRQTTRDRI 167


>gi|258611928|ref|ZP_05711719.1| LOW QUALITY PROTEIN: FAD synthetase [Listeria monocytogenes FSL
           R2-503]
 gi|258607223|gb|EEW19831.1| LOW QUALITY PROTEIN: FAD synthetase [Listeria monocytogenes FSL
           R2-503]
          Length = 203

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 23/207 (11%)

Query: 46  NNSPITVLSFNPHPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSA 104
            N  +T +SF+PHP   ++        L+P   +E+ L   G   LI   FT   A  + 
Sbjct: 1   ENEILTAISFSPHPLWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTP 60

Query: 105 EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI 164
           E+F++  L   L +  ++ G++F FGK R  D  +L+   + Y      +  +  N+   
Sbjct: 61  EEFVRDHLTN-LNLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TK 118

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
           +SS+NIR  + +GH   A  LLG+ + I   V +GE  G           L   +L   G
Sbjct: 119 ISSTNIRAFIRRGHFQEAEELLGHPWYITGIVENGEMTG-----------LDDYVLPTTG 167

Query: 225 VYAIRFRTQDQTSYSGVANFGRNPTMV 251
            Y             G+ N   N T+ 
Sbjct: 168 TYQTDS---------GIVNVTNNRTIE 185


>gi|325473487|gb|EGC76682.1| riboflavin biosynthesis protein [Treponema denticola F0402]
          Length = 287

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 9/226 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +++G FDG H GH  +L Q +  A  + +   +++F   P  + ++ +    +S  
Sbjct: 30  KETAISVGGFDGPHKGHDKLLRQVLSYAAENALVPGLVTFFRSPAAV-KNKAYSGDVSSL 88

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ K  +++GF  ++   F+   A      F   +L++ + +K +  G+ F  G  R  
Sbjct: 89  RLRLKKFQELGFHFIVLIDFSASFAKIEGTAFFD-ILIKTIRMKYLAVGSDFFCGYRRGL 147

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+K   + GF    ID + N  S  +SSS IR A+  G    A  LLGY F  +  
Sbjct: 148 GVDDLKKIAPQKGFCFDSIDPV-NRGSLKISSSAIREAVRLGDFSLAKELLGYPFLFDFV 206

Query: 196 VIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            +  E K   T+  P A +     IL + G Y +  +  D+     
Sbjct: 207 SLPWEVKDKNTIFAPKAYI---SQILPQSGKYRVLVQKTDRQEQEA 249


>gi|167753102|ref|ZP_02425229.1| hypothetical protein ALIPUT_01373 [Alistipes putredinis DSM 17216]
 gi|167659416|gb|EDS03546.1| hypothetical protein ALIPUT_01373 [Alistipes putredinis DSM 17216]
          Length = 124

 Score =  129 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 2/114 (1%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
               IE +V+HG ++GR LGFPTANM+++    ++ GVY       D   Y  ++N G N
Sbjct: 1   MSVWIEGEVMHGRQLGRELGFPTANMEVADADTIESGVYESYVEI-DGVEYKAMSNLGSN 59

Query: 248 PTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           P++   GP  LE+ IFDFS ++YG+R  V     +R E KF  +E+L+  +  D
Sbjct: 60  PSV-GGGPRHLETHIFDFSGDLYGRRLRVELRRKIRDERKFDSLEELQRQIERD 112


>gi|255076219|ref|XP_002501784.1| predicted protein [Micromonas sp. RCC299]
 gi|226517048|gb|ACO63042.1| predicted protein [Micromonas sp. RCC299]
          Length = 301

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 70/295 (23%), Positives = 112/295 (37%), Gaps = 47/295 (15%)

Query: 8   EINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           +  + +P    GG  VVA+G FD +H GH  +  +A K+       ++SF      ++  
Sbjct: 25  QKFERIPPAEDGGKIVVALGKFDAMHRGHAELARRASKM---GAPILMSFGGM-AEVLGW 80

Query: 66  SSPIFTLSPPSIQEKILEKMGFS------ALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
              +  ++P   + ++LE    +            F  +    S E+F+  +  + + V 
Sbjct: 81  EEKLPVVAP-GDRARVLEMWKAACEGKTVREHVIPF-ADIRRMSPEEFVSTL--KDIGVG 136

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK-------------SQIVS 166
            V+ G  +RFG   AG   IL+  GEK G     +D L  N+             +  VS
Sbjct: 137 GVVAGANYRFGFKAAGTADILKDLGEKLGVDVSIVDLLPANEPGDEGVYPAGYENTPQVS 196

Query: 167 SSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           S+ +R  L  G V  AA LLG    +   V+     G    FPT+    + +     G Y
Sbjct: 197 STRVRACLAAGDVEQAARLLGRNHAL---VLRIAGAGNDGRFPTS---AATNQYPAIGRY 250

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVP--NGPLLLESFIFDFSQEIYGQRCTVSFF 279
           A      D          GR PT     +G ++LE +              V F 
Sbjct: 251 AAIVVGADG---------GRTPTTAEVTDGEIVLEGWGETNGGND-DANVCVEFV 295


>gi|42526549|ref|NP_971647.1| riboflavin biosynthesis protein, putative [Treponema denticola ATCC
           35405]
 gi|41816742|gb|AAS11528.1| riboflavin biosynthesis protein, putative [Treponema denticola ATCC
           35405]
          Length = 287

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 9/226 (3%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPP 75
           K   +++G FDG H GH  +L Q +  A  + +   +++F   P  + ++ +    +S  
Sbjct: 30  KETAISVGGFDGPHKGHDKLLRQVLTYAAENTLVPGLVTFFRSPAAV-KNKAYSGDVSSL 88

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ K  +++GF  ++   F+   A      F   +L++ + +K +  G+ F  G  R  
Sbjct: 89  RLRLKKFQELGFHFIVLIDFSASFAKIEGTAFFD-ILIKTIRMKYLAVGSDFFCGYRRGL 147

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
               L+K   + GF    ID + N  S  +SSS IR A+  G    A  LLGY F  +  
Sbjct: 148 GVDDLKKIAPQKGFCFDSIDPV-NRGSLKISSSAIREAVRLGDFSLAKELLGYPFLFDFV 206

Query: 196 VIHGE-KIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
            +  E K   ++  P A +     IL + G Y +  +  D+     
Sbjct: 207 SLPWEVKDKNSIFAPKAYI---SQILPQSGKYRVLVQKTDRQEQEA 249


>gi|212696543|ref|ZP_03304671.1| hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676479|gb|EEB36086.1| hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 143

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 8/145 (5%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPH 58
           + +F +++ N+     L    V++GNFDG+H GH  ++++ I+I+    +T  VL F  +
Sbjct: 5   IKIF-DLDFNEF---DLSPKAVSLGNFDGVHRGHQKLMKENIEISKEKNLTPSVLLFKEN 60

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            + I+        L+    + +IL+ +G       +F+ E  N S  +FI+++L + L  
Sbjct: 61  TKNILNGEK--EYLTSLEDKIEILKNIGIECFCLLEFSDEFKNLSPYEFIEEILYKKLNT 118

Query: 119 KTVITGTKFRFGKDRAGDRGILQKR 143
           K VI G  +RFGK   GD   L+K 
Sbjct: 119 KYVIVGDNYRFGKMAKGDIKTLKKI 143


>gi|332298594|ref|YP_004440516.1| FAD synthetase [Treponema brennaborense DSM 12168]
 gi|332181697|gb|AEE17385.1| FAD synthetase [Treponema brennaborense DSM 12168]
          Length = 284

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 5/223 (2%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G  +++G FDG+H GH  +    +   +  P  +++F   PR +   +     +S  + +
Sbjct: 32  GTALSVGGFDGMHAGHDALFNAVLARTDLLP-GIVTFAKPPRALRHPAVFEGAVSTLAQR 90

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I  + GF+  +   F+ E        F+  +L +   +K +  G  FR G   + D  
Sbjct: 91  LDICREKGFAFAVVIDFSGEFGRMEGSTFL-SILADTFRMKFLAEGPDFRCGYKGSADID 149

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +++   EK G     I+ +  +  + VSS+ IR A+  G    A  LL   F ++  +  
Sbjct: 150 VIRTFTEKRGVVLDVIEPVVID-GERVSSTRIRAAVAAGDFFGAERLLRRPFRLDCSLFR 208

Query: 199 GEKIGRTLGFPTANMQLSP--DILLKEGVYAIRFRTQDQTSYS 239
            E+    +    A    +    +L  +G Y +R   ++     
Sbjct: 209 WERSAPDVLTAEAGADGARTVQVLPPDGEYEVRALCRENGFLQ 251


>gi|218506403|ref|ZP_03504281.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
           etli Brasil 5]
          Length = 96

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/95 (48%), Positives = 64/95 (67%)

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           FR QD T +  VA++GR PT+  NG  LLE+++FDFS ++YGQ C VSFF Y+RPE+KF 
Sbjct: 1   FRRQDGTLHDAVASYGRRPTVTENGAPLLETYVFDFSGDLYGQLCAVSFFGYIRPELKFD 60

Query: 290 DIEKLKIYMGEDEKKARKILESSYPLSERDRIICF 324
            ++ L   +  DE++AR +L    PLS  D  +CF
Sbjct: 61  GLDPLVAQIKRDEEEARALLAGVKPLSALDGKLCF 95


>gi|330891593|gb|EGH24254.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 108

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
           M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1   MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ 109
           PR      +    L+    + ++L   G   ++   F       SA  F++
Sbjct: 58  PREFFAPETAPARLARLRDKIELLSAEGVDRVLCLSFNQRLCKLSAASFVE 108


>gi|168039944|ref|XP_001772456.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676253|gb|EDQ62738.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 266

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 33/259 (12%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV--LSFNPHPRTIIQSSSPIFTLSPPS 76
           GGVVA+G F+G+HLGH  ++E+A +I     +++  +        ++     +  ++   
Sbjct: 3   GGVVALGKFEGLHLGHRALVERASEIGKPIMLSLSGM------AEVLGWEPKLPVVA-AD 55

Query: 77  IQEKILEKMG--FSALIRYKFTLETA---NYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            + ++LE  G     ++  +  LE A     S EQF++K+  E L+VK  + G  +RFG 
Sbjct: 56  DRARVLESWGKHCHDMVPQEHVLEFAKIRKLSPEQFVEKLAKE-LKVKGAVAGADYRFGF 114

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ----------IVSSSNIRTALTKGHVLN 181
             AG    L +  EKYG  +  ++ + ++K             VS++ IR AL +G++  
Sbjct: 115 RAAGKASDLVELCEKYGLQSAIVEPIMDSKDTPLDGTAKDKGQVSTTRIRNALAEGNMKR 174

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV 241
              LLG +  +  D+      G+T+  P  N+   P      G Y    +  D +    V
Sbjct: 175 VTELLGRQHRLYLDLKDCVPSGKTITLPIGNVLNQP---PATGSYECSVQFPDLSDDISV 231

Query: 242 ANFGRNPTMVPNGPLLLES 260
                   ++ +  + LES
Sbjct: 232 LQV-----IIRDTEISLES 245


>gi|302786374|ref|XP_002974958.1| hypothetical protein SELMODRAFT_56433 [Selaginella moellendorffii]
 gi|300157117|gb|EFJ23743.1| hypothetical protein SELMODRAFT_56433 [Selaginella moellendorffii]
          Length = 190

 Score =  124 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 22/192 (11%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP-P 75
           L G VVA+G FD +H+GH  + EQA ++    P  VLSF      I+     +  ++P  
Sbjct: 1   LAGSVVALGKFDALHIGHRSLAEQASRM---GPPVVLSFTGM-GEILGWDKRLPVVAPCD 56

Query: 76  SIQEKILEKMGFSALIRYKFTLET---ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
             +  +L     S L   +F+LE     + S +QF++K+ VE L VK V+ G  +RFG  
Sbjct: 57  RARVMLLWSAQCSGLTPDEFSLEFGKVRHLSPQQFVEKLAVE-LRVKGVVAGENYRFGYK 115

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNN-------------KSQIVSSSNIRTALTKGHV 179
            AGD   L+K  +++G     ++ + +                  VSS+ +R AL  G++
Sbjct: 116 AAGDSSELKKLCKEWGLDVFVVEAVMDKFDQAPSSVQGDARDRGQVSSTRVRKALADGNM 175

Query: 180 LNAAHLLGYRFT 191
               +LLG    
Sbjct: 176 KRVTNLLGRNHR 187


>gi|302558064|ref|ZP_07310406.1| riboflavin biosynthesis protein RibF [Streptomyces griseoflavus
           Tu4000]
 gi|302475682|gb|EFL38775.1| riboflavin biosynthesis protein RibF [Streptomyces griseoflavus
           Tu4000]
          Length = 124

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +E  V+ G + GR LGFPTAN++  P   +  +GVYA     Q   +     + G NP  
Sbjct: 1   MEGVVVRGAQRGRDLGFPTANVETLPHTAIPADGVYAGWLHAQG-EAMPAAISVGTNPQF 59

Query: 251 VPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                  +E++  D    ++YG    V F  ++R + KF  +E L   M ED K+ ++++
Sbjct: 60  -DGTERTVEAYAIDRVGLDLYGLHVAVDFLSFVRGQAKFDTLEALLEQMAEDVKRCKELV 118

Query: 310 ESS 312
            ++
Sbjct: 119 AAA 121


>gi|262364546|gb|ACY61103.1| riboflavin biosynthesis protein: riboflavin kinase and FMN
           adenyltransferase [Yersinia pestis D182038]
          Length = 102

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 1/103 (0%)

Query: 213 MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQ 272
           M L   +   +GVYA+       T   GVAN G  PT+       LE  + D + ++YG 
Sbjct: 1   MPLKRLVAPVKGVYAVDVYGLGSTPLYGVANIGTRPTVAGV-RQQLEVHLLDVTMDLYGC 59

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
              V     LR E +F  +E LK  +  D   AR       P+
Sbjct: 60  HIDVVLRAKLRNEQRFASLEALKQQIANDVVTARTFFGLKTPV 102


>gi|111022375|ref|YP_705347.1| riboflavin biosynthesis protein [Rhodococcus jostii RHA1]
 gi|110821905|gb|ABG97189.1| riboflavin biosynthesis protein [Rhodococcus jostii RHA1]
          Length = 481

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 189 RFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNP 248
             +I   V+HG++ GR LGF TAN++L     + +GV+A R    D ++     + GR P
Sbjct: 358 NPSIVGTVVHGDQRGRELGFRTANLELEDSNSVADGVWAGRCTLPDGSTAIAAISIGRRP 417

Query: 249 TMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
           T    +G  LLE+ + DF  ++Y     VS   ++R ++ F   E+L   +  D  + R 
Sbjct: 418 TFYGRSGVRLLEAHLLDFDGDLYDATLEVSLHQWMRGQVTFASKEELVAALAADVVRTRS 477

Query: 308 ILE 310
           ++ 
Sbjct: 478 LIA 480


>gi|313157312|gb|EFR56737.1| regulatory protein RibR family protein [Alistipes sp. HGB5]
          Length = 121

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           IE  V HG ++GR LGFPTAN+ +   +  ++GVY  R    D   Y  ++N GRNP++ 
Sbjct: 6   IEGVVEHGRRLGRELGFPTANVAVPDSVAAEDGVYRSRAEM-DGAVYDAMSNLGRNPSV- 63

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                 LE+ IF F   +YG+   V   + +R E +F  +E+L+  + +D +   K+
Sbjct: 64  GGTARRLETHIFGFRGALYGRMLRVELLEKIRDERRFDTLEELRAQIEKDREYILKL 120


>gi|295107326|emb|CBL04869.1| FAD synthase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 118

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLK-EGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +   V  G   G  LGF TAN+ +   +    +GVYA   +  D T Y    N G   T 
Sbjct: 1   MTGTVEPGRGEGADLGFRTANLAVPDQLRPLGDGVYAAYAQV-DGTRYKAAVNVGVAATF 59

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   E  + DF+ ++YG+   V F  +LRP  KF D+E+L   +  + +  R+ L
Sbjct: 60  ADRATATCEVHLLDFAGDLYGKPVKVEFLHWLRPMRKFDDVEELIATVKGNIQWVRENL 118


>gi|255023602|ref|ZP_05295588.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           monocytogenes FSL J1-208]
          Length = 190

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 14/183 (7%)

Query: 58  HPRTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           HP   ++        L+P   +E+ L   G   LI   FT   A  + E+F++  L   L
Sbjct: 1   HPLWALKQIDIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVKDHLTN-L 59

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +  ++ G++F FGK R  D  +L+   + Y      +  +  N+   +SS+NIR  +  
Sbjct: 60  NLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRC 118

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQT 236
           GH   A  LLG+ + I   V +GE            + L   +L   G Y       + T
Sbjct: 119 GHFQEAEELLGHPWYITGTVKNGEM-----------IDLEDYVLPATGTYQTDSGIVNVT 167

Query: 237 SYS 239
           ++ 
Sbjct: 168 NHR 170


>gi|255018914|ref|ZP_05291040.1| hypothetical protein LmonF_16426 [Listeria monocytogenes FSL
           F2-515]
          Length = 136

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
           M V H   +  +     +  V+ IG FDG+H+GH  IL  A+ I   N  +T +SF+PHP
Sbjct: 1   MEVSH---VTLAPNKDSRAAVLTIGKFDGVHIGHQTILNTALSIKKENEILTAISFSPHP 57

Query: 60  RTIIQS-SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              ++        L+P   +E+ L   G + LI  +FT   A  + E+F+   L   L +
Sbjct: 58  LWALKQIEIYREMLTPRMEKERWLAYYGVNHLIETEFTSRYAETTPEEFVTDHLTN-LNL 116

Query: 119 KTVITGTKFRFGKDRAGDRG 138
             ++ G++F FGK R  D  
Sbjct: 117 SHIVVGSEFNFGKGRDSDVD 136


>gi|157364234|ref|YP_001471001.1| cytidyltransferase-like protein [Thermotoga lettingae TMO]
 gi|157314838|gb|ABV33937.1| cytidyltransferase-related domain [Thermotoga lettingae TMO]
          Length = 247

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 37/274 (13%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT----VLS--FNPHPRTIIQSSSPIF 70
           +K   V +G FDG+HLGH  +L++  +I+    IT    V+S  F+          +   
Sbjct: 1   MKKSAVTVGVFDGVHLGHQRLLKRVQQISEEYKITSTVYVVSYPFD------FFDENFEG 54

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            + P S +   + +  F+  I     LE  +  AE F ++ L +    + ++ G  F+FG
Sbjct: 55  LIMPISSRVAEISR--FAQYIEVLDLLEIKDMPAEDFFKEYLSD---AEFLVVGEDFKFG 109

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K+  GD  +L++   + G       ++ + K   +SSS +R  +  G + N + LLG  +
Sbjct: 110 KNATGDIALLRRLCSQNGTKLEIFSDITDLKGNRISSSLLRKLIQHGDIDNVSKLLGRDY 169

Query: 191 TIESDVIHGEKIGRTL-GFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            +E  +   ++    +  +  A+ ++   +L KEGV+ +       T   G   FG+   
Sbjct: 170 LLEFVIESIDENSDKMHCYLKADEKI---VLPKEGVFEVFEELFGIT---GRVQFGKKII 223

Query: 250 M-VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYL 282
              P  PL +            G    ++F   L
Sbjct: 224 FTAPKTPLAV------------GSMMQLAFKRRL 245


>gi|313634307|gb|EFS00918.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri FSL N1-067]
          Length = 192

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P   +E+ L   G   LI   FT   A  + EQF+   L   L +  ++ G++F FG
Sbjct: 17  MLTPRMEKERWLAHFGVDYLIETAFTPRYAETTPEQFVTNHLSN-LNLSHIVVGSEFNFG 75

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R  D  +L+     Y      +  +  N+   +SS+NIR  + +GH   A  LLG+ +
Sbjct: 76  KGRDSDVELLRDLCAPYNIGVTSVPVIETNQ-TKISSTNIRAFIRRGHFQEAEELLGHPW 134

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            I   V +GE            + L   +L   G Y
Sbjct: 135 YISGMVENGEM-----------IDLDDYVLPATGEY 159


>gi|256376743|ref|YP_003100403.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
 gi|255921046|gb|ACU36557.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
          Length = 790

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQD----QTSYSGVANFG 245
            +   V+HG   G+ LGFPTAN+       + ++GVYA RF   D          + + G
Sbjct: 451 RVSGVVVHGAGRGKDLGFPTANLDFDASTRVPEDGVYAGRFTLLDGPDAPVVLPALVSIG 510

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
            N T        +E+ + DF  ++Y +R  V    ++R ++ F  +E L   M  DE   
Sbjct: 511 SNETF-DGSARTVEAHVLDFDGDLYDRRAEVELESWIRGQVGFSSVEALVEQMRRDEVVG 569

Query: 306 RKILESSYP 314
           R    SS P
Sbjct: 570 RAHFSSSGP 578


>gi|303233365|ref|ZP_07320034.1| riboflavin kinase [Atopobium vaginae PB189-T1-4]
 gi|302480494|gb|EFL43585.1| riboflavin kinase [Atopobium vaginae PB189-T1-4]
          Length = 468

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 13/157 (8%)

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKE 223
           +SS+ IR  +  GHVL AA  L   + +E  V+HG   G ++GF TAN+   PD+ +   
Sbjct: 306 ISSTYIRKLIANGHVLCAARALTRPYCLEGTVMHGRGKGASMGFATANILTRPDVCVPAA 365

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPN-----------GPLLLESFIFDFSQEIYGQ 272
           GVYA  F   D   Y    N G   +                   LE+ + DF   +YG+
Sbjct: 366 GVYAG-FVLADGVLYPAAINMGLPESFSSQAYCALHASNVAHRGFLEAHLIDFDGNLYGR 424

Query: 273 RCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
             +V    Y+R E  F   ++L   +  +    + +L
Sbjct: 425 VVSVMVIAYIRSEQHFSSTDELSRCVKANIAAIQTLL 461



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 22/155 (14%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSS---------- 67
            VV+IG +DG H GH  ++ +  + A     P  V++FNP P  ++++++          
Sbjct: 76  AVVSIGVYDGFHKGHQALIRETKRAAQARRLPSCVITFNPDPADVLRTAACTSDGTHLPS 135

Query: 68  ----------PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
                         L   + + + + +     +I   FT + A  S E F   V  +   
Sbjct: 136 ATEAASAVAVEHTHLMSLAARLEYVARTQVDFIIVIPFTWDFARLSYEDFFSFVQTKLAF 195

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
              +  G+ FR G   AG    L + G+  G    
Sbjct: 196 PCELHVGSNFRLGYKGAGTIAALSEYGKTIGMDVH 230


>gi|16079982|ref|NP_390808.1| RNA-binding riboflavin kinase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310874|ref|ZP_03592721.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315199|ref|ZP_03597004.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320117|ref|ZP_03601411.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221324399|ref|ZP_03605693.1| riboflavin kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|2829804|sp|P94465|RIBR_BACSU RecName: Full=Regulatory protein ribR
 gi|1707406|emb|CAA70887.1| regulatory protein [Bacillus subtilis]
 gi|2293255|gb|AAC00333.1| RibR [Bacillus subtilis]
 gi|2635395|emb|CAB14890.1| RNA-binding riboflavin kinase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 230

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+ G+++GR LGFPTAN+      L + GVY +     +   + GV N G  PT+  N
Sbjct: 6   GTVVKGKQLGRKLGFPTANVDAKIHGL-RNGVYGVLATV-NHQFHLGVMNIGVKPTVGSN 63

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               LE F+FDF ++IYG++   S    +R E +F  +E L   + +D     K  E
Sbjct: 64  LEKTLEIFLFDFHRDIYGEKIECSILFKIREERRFDSLESLTKQIKKDISCVAKRFE 120


>gi|213581352|ref|ZP_03363178.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          E98-0664]
          Length = 94

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
          M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1  MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKF 95
          P  +  +      L+    +   L + G   ++  KF
Sbjct: 58 PLELFATDKAPARLTRLREKLHYLAQCGVDYVLCVKF 94


>gi|302791225|ref|XP_002977379.1| hypothetical protein SELMODRAFT_56432 [Selaginella moellendorffii]
 gi|300154749|gb|EFJ21383.1| hypothetical protein SELMODRAFT_56432 [Selaginella moellendorffii]
          Length = 190

 Score =  119 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 24/193 (12%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP-P 75
           L G VVA+G FD +H+GH  + EQA ++    P  VLSF      I+     +  ++P  
Sbjct: 1   LAGSVVALGKFDALHIGHRSLAEQASRM---GPPVVLSFTGM-GEILGWDKRLPVVAPCD 56

Query: 76  SIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             +  +L     S L       +F     + S +QF++K+ VE L VK V+ G  +RFG 
Sbjct: 57  RARVMLLWSAQCSGLTPDECSLEFGK-VRHLSPQQFVEKLAVE-LRVKGVVAGENYRFGY 114

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNN-------------KSQIVSSSNIRTALTKGH 178
             AGD   L+K  +++G     ++ + +                  VSS+ +R AL  G+
Sbjct: 115 KAAGDSSELKKLCKEWGLDVFVVEAVMDKFDQAPSSVQGDARDRGQVSSTRVRKALADGN 174

Query: 179 VLNAAHLLGYRFT 191
           +    +LLG    
Sbjct: 175 MKRVTNLLGRNHR 187


>gi|148222868|ref|NP_001079669.1| hypothetical protein LOC379356 [Xenopus laevis]
 gi|28422186|gb|AAH46843.1| MGC52924 protein [Xenopus laevis]
          Length = 172

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 7/146 (4%)

Query: 184 HLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSY 238
            +    +    +V+ G   G   LG PTAN      D L  +   G+Y    +  +   Y
Sbjct: 18  AMKTLPYFCRGEVVKGFGRGSKELGIPTANFAEKIVDRLPADISTGIYYGWGQVGNGEVY 77

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             V + G NP    N    +E+ I  DF ++ YG+  ++    Y+RPE  F  ++ L   
Sbjct: 78  KMVMSIGWNP-FYKNTKKSMETHIIHDFHEDFYGEILSIVIAGYIRPEKSFTSLDALISA 136

Query: 298 MGEDEKKARKILESSYPLSERDRIIC 323
           +  D ++A+K LE     + RDR  C
Sbjct: 137 IHSDIEEAKKRLELPEFQALRDRFFC 162


>gi|300784421|ref|YP_003764712.1| riboflavin kinase/FAD synthetase [Amycolatopsis mediterranei U32]
 gi|299793935|gb|ADJ44310.1| riboflavin kinase/FAD synthetase [Amycolatopsis mediterranei U32]
          Length = 150

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIRFRTQDQTSYSGVANF 244
           +   F +   V  G+K GR LGFPTAN+ L   D  L +GV+A      D        + 
Sbjct: 1   MPEYFVVRGTVESGDKRGRELGFPTANIALRDQDGSLGDGVWAGWIGRADGARLPAAISV 60

Query: 245 GRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           GR PT    +G  LLE+ + DFS ++YG+   V    +LR + K+   E L   +  D  
Sbjct: 61  GRRPTYYGADGYRLLEAHVLDFSGDLYGETLVVWLGSHLRQQEKYASAEDLITALKNDIA 120

Query: 304 KARKILESSYPLS 316
            A +        S
Sbjct: 121 AATRWTAEHPAAS 133


>gi|302525657|ref|ZP_07277999.1| predicted protein [Streptomyces sp. AA4]
 gi|302434552|gb|EFL06368.1| predicted protein [Streptomyces sp. AA4]
          Length = 155

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQDQTSYSG 240
           A    G  F +   V  G+K GR LGFPTAN+ L      L +GV+A      D T  + 
Sbjct: 2   ADERDGTFFVVRGPVEPGDKRGRELGFPTANIALRDQRGELGDGVWAGWAERADGTRVAA 61

Query: 241 VANFGRNPTMVP-NGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
             + GR PT    +G  L+E+F+ DF  ++YG+R TV    +LR +  F   + L   +G
Sbjct: 62  AVSVGRRPTYYGADGYRLVEAFLLDFEGDLYGERLTVWLGKHLRNQRGFDSSQDLIDALG 121

Query: 300 EDEKKARKILES 311
            D   AR+ + +
Sbjct: 122 HDVAAAREWVAA 133


>gi|269115012|ref|YP_003302775.1| riboflavin biosynthesis protein [Mycoplasma hominis]
 gi|268322637|emb|CAX37372.1| Riboflavin biosynthesis protein [Mycoplasma hominis ATCC 23114]
          Length = 290

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 46/320 (14%)

Query: 1   MHVF-HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSP---ITVLSFN 56
           M VF  + +   ++   L    + +G+F+ +HLGH+ + + A  +  + P   + ++ F 
Sbjct: 1   MQVFDWDFKAKLNINEPLT---ICLGSFETLHLGHNELFKIAKDLKQSYPDQKLAIMMFK 57

Query: 57  PHP---RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
             P     ++   +       P  +   L  +GF  +          N S   FIQ + +
Sbjct: 58  N-PVKNSQVLTKKA-----MQPKTRLYTLAMLGFDYVFLVDVNQTILNCSYSDFIQGLKI 111

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               VK V+ G  FRFG +R G+   L+K      F+    +EL+ NK Q +SS+ I   
Sbjct: 112 N--NVKNVVCGQDFRFGFNREGNIDKLKKY-----FNVYVANELKVNK-QKISSTIINEF 163

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ 233
           + +G++     LL  +++I   +++ +K      +P    QL   I +   V+       
Sbjct: 164 IEEGNINGLNKLLIDKYSI---IVNSQKFNFK--YPEHLNQLKAGIYIANVVW------- 211

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYG---QRCTVSFFDYLRPEIKFKD 290
           +   Y G+    +N     N  L   + I+ F  + +    Q   + F   +R      +
Sbjct: 212 NNIEYHGLIFINKN-QFDSNNNLQENNIIYLFDIDYFISKYQELYIEFLQCIR---HINN 267

Query: 291 IEKLKIYMG-EDEKKARKIL 309
             +    +   D + A+   
Sbjct: 268 NSE--NQISTNDIEIAKNYF 285


>gi|328948919|ref|YP_004366256.1| tRNA pseudouridine synthase B [Treponema succinifaciens DSM 2489]
 gi|328449243|gb|AEB14959.1| tRNA pseudouridine synthase B [Treponema succinifaciens DSM 2489]
          Length = 620

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 94/244 (38%), Gaps = 16/244 (6%)

Query: 2   HVFHNIEI-NQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
            VF   E  + + P   K  G  + IG+F+ IH GH  +++ A+    N    +++F+  
Sbjct: 358 KVFSWNEFCSLNFPVEWKSKGCALTIGSFEAIHAGHVALIKTAVS-QKNFVSGIITFSSQ 416

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                  +     +     + +  + +G    +   FT + +      FI+ + +    +
Sbjct: 417 -----IKNEGTGLIFTLEQRLEFFKDLGLDFAVVIDFTQDFSKIEGADFIETL-ISVCGM 470

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           K ++ G+ F+ G     +   L+K  +K  F      +    + + +SSS ++  +  G+
Sbjct: 471 KFLVEGSDFKCGYKGLLNMEELEKISQKKNFELCR-QDYVFFEDEKISSSRVKKEILAGN 529

Query: 179 VLNAAHLL--GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
            + A  +L   +   +       + +G     F   N      +L K G+Y +     D 
Sbjct: 530 FICAQKMLLRPFALDVRGISFKEKSVGSENSIFEFHNE--KNQVLPKNGIYKVTALDSDG 587

Query: 236 TSYS 239
             + 
Sbjct: 588 NIFH 591


>gi|148228987|ref|NP_001087452.1| riboflavin kinase [Xenopus laevis]
 gi|50927273|gb|AAH79807.1| MGC86418 protein [Xenopus laevis]
          Length = 154

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN      D L  +   G+Y    +  +   Y 
Sbjct: 1   MKTLPYFCRGEVVKGFGRGSKELGIPTANFAEKIVDRLPADISTGIYYGWGQVGNGEVYK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I  +F ++ YG+  ++    Y+RPE  F  ++ L   +
Sbjct: 61  MVMSIGWNP-FYKNTKKSMETHIIHEFDKDFYGEILSIVIAGYIRPEKSFDSLDALISAI 119

Query: 299 GEDEKKARKILESSYPLSERDRIIC 323
             D ++A+K LE     + RDR  C
Sbjct: 120 HSDIEEAKKQLELPEFQALRDRFFC 144


>gi|195392385|ref|XP_002054838.1| GJ24661 [Drosophila virilis]
 gi|194152924|gb|EDW68358.1| GJ24661 [Drosophila virilis]
          Length = 152

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 7/141 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN+ L     L E    GVY       +   Y 
Sbjct: 2   LHQLPIYASGEIVRGFGRGSKELGIPTANLSLDVVKSLPESLHTGVYYGWSNVNNGEVYK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +   F  ++YGQ   +    YLRPE  F  ++ L   +
Sbjct: 62  MVLSVGWNP-FYNNKEKSVETHMLHKFDCDLYGQTLKICIVGYLRPEKNFDSLDDLIKVI 120

Query: 299 GEDEKKARKILESSYPLSERD 319
             D ++A+ +L+       R+
Sbjct: 121 KSDIEQAKTLLDQPENRKLRE 141


>gi|88854362|ref|ZP_01129029.1| riboflavin biosynthesis protein RibF (riboflavin kinase) [marine
           actinobacterium PHSC20C1]
 gi|88816170|gb|EAR26025.1| riboflavin biosynthesis protein RibF (riboflavin kinase) [marine
           actinobacterium PHSC20C1]
          Length = 147

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 173 ALTKGHVLNAAHLLGYRF--TIESDVIHGEKIGRTLGFPTANMQL-SPDILLKEGVYAIR 229
           AL  G +    H + +    T    V+HG+K GR LGFPTAN+++ SP++L  +GVYA  
Sbjct: 6   ALLTGPITEWGHPMEHSPSATFRGTVVHGDKRGRELGFPTANIEVGSPELLPGDGVYACW 65

Query: 230 FRTQDQTSYSGVA-NFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKF 288
                     G   + G NPT        +E++I DF  ++YG    V+   +LR  ++ 
Sbjct: 66  VSFPPAGLQYGATVSIGANPTFDDVVDRRVEAYIHDFDADLYGSDIKVTVHAWLRAMVRC 125

Query: 289 KDIEKLKIYMGEDEKKARKILE 310
             +++L      D   +R  L 
Sbjct: 126 DSLQELIDKTAADVAASRIALR 147


>gi|294498831|ref|YP_003562531.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium QM B1551]
 gi|294348768|gb|ADE69097.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium QM B1551]
          Length = 240

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I+  V+ G K GR LGFPTAN+    + L K GVY +    +    + GV N G  PT  
Sbjct: 16  IKGQVVPGRKQGRYLGFPTANIDTQHEEL-KNGVYGVLVHLRGLE-HIGVMNVGVKPTFG 73

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  E  I DF+  IYG+         +R E KF  IE LK  +  D  +A++  +
Sbjct: 74  SELSKTFEVHILDFNDVIYGETVQCDVIFRVRGEKKFPSIEFLKHQIKADTLQAKQRFQ 132


>gi|80477803|gb|AAI08784.1| MGC52924 protein [Xenopus laevis]
          Length = 154

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN      D L  +   G+Y    +  +   Y 
Sbjct: 1   MKTLPYFCRGEVVKGFGRGSKELGIPTANFAEKIVDRLPADISTGIYYGWGQVGNGEVYK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I  DF ++ YG+  ++    Y+RPE  F  ++ L   +
Sbjct: 61  MVMSIGWNP-FYKNTKKSMETHIIHDFHEDFYGEILSIVIAGYIRPEKSFTSLDALISAI 119

Query: 299 GEDEKKARKILESSYPLSERDRIIC 323
             D ++A+K LE     + RDR  C
Sbjct: 120 HSDIEEAKKRLELPEFQALRDRFFC 144


>gi|295704153|ref|YP_003597228.1| riboflavin biosynthesis protein [Bacillus megaterium DSM 319]
 gi|294801812|gb|ADF38878.1| Riboflavin biosynthesis protein, Riboflavin kinase [Bacillus
           megaterium DSM 319]
          Length = 240

 Score =  117 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           I+  V+ G + GR LGFPTAN+    + L K GVY +    +    + GV N G  PT  
Sbjct: 16  IKGQVVPGRQQGRHLGFPTANIDTQHEEL-KNGVYGVLVHLRGLE-HIGVMNVGVKPTFG 73

Query: 252 PNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  E  I DF+  IYG+         +R E KF  IE LK  +  D  +A++  +
Sbjct: 74  SKLSKTFEVHILDFNDVIYGETVQCDVIFRVRGEKKFPSIEFLKHQIKADTLQAKQRFQ 132


>gi|159149209|gb|ABW91168.1| riboflavin kinase [Mycobacterium lepromatosis]
          Length = 116

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 12/115 (10%)

Query: 207 GFPTANMQLSPDIL-LKEGVYAIRFRTQDQTS----------YSGVANFGRNPTMVPNGP 255
           G PTAN+          +GVYA  F                 Y    + G NPT      
Sbjct: 2   GDPTANVAPPMYSATPADGVYAAWFTVLGHGPATGTVVPGECYQAAVSVGTNPTF-SGRT 60

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             +E+F+ D   ++YGQ   + F   +R + KF     L   M +D  +AR +L 
Sbjct: 61  HTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSAADLVAAMEKDIDRARALLA 115


>gi|321312466|ref|YP_004204753.1| RNA-binding riboflavin kinase [Bacillus subtilis BSn5]
 gi|320018740|gb|ADV93726.1| RNA-binding riboflavin kinase [Bacillus subtilis BSn5]
          Length = 230

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
             V+ G+++GR LGFPTAN+      L + GVY +     +   + GV N G  PT+  N
Sbjct: 6   GTVVKGKQLGRKLGFPTANVDAKMHGL-RNGVYGVLATV-NHQFHLGVMNIGVKPTVGSN 63

Query: 254 GPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               LE F+FDF ++IYG++   S    +R E +F  +E L   + +D     K  E
Sbjct: 64  LEKTLEIFLFDFHRDIYGEKIECSILFKIREERRFDALESLTKQIKKDISCVAKRFE 120


>gi|84393570|ref|ZP_00992323.1| hypothetical protein V12B01_08762 [Vibrio splendidus 12B01]
 gi|84375779|gb|EAP92673.1| hypothetical protein V12B01_08762 [Vibrio splendidus 12B01]
          Length = 116

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 5/105 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPH 58
           M +   I    ++     G V+ IGNFDG+HLGH  +L Q  K A     P  V++F P 
Sbjct: 1   MELIRGI---HNIKAQHHGCVLTIGNFDGVHLGHQEVLSQVSKQAAALGLPSVVMTFEPQ 57

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYS 103
           P  +         L+    +   L K+  S L+   F      Y 
Sbjct: 58  PMELFARGKAPARLTRLRDKYVQLSKLDISRLLCVNFNSILQAYP 102


>gi|193216700|ref|YP_001999942.1| hypothetical protein MARTH_orf367 [Mycoplasma arthritidis 158L3-1]
 gi|193002023|gb|ACF07238.1| FAD synthase [Mycoplasma arthritidis 158L3-1]
          Length = 290

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 137/321 (42%), Gaps = 43/321 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN---NSPITVLSFNP 57
           M V+ N ++ +  P   +   + +G F+ +HLGH+ ++++A +I      + + +L    
Sbjct: 3   MKVY-NWDLLKQSPIIKEPLTICLGGFESLHLGHYELIKKAREINATNSENKLAILLLKN 61

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
              +I +       L     +   +  + F      + + +  N SAE+FI+K+  + + 
Sbjct: 62  ---SINKGRIQEKKLFQLKTRLYTISALNFDYAFYIEVSEDLINLSAEKFIEKL--KEIN 116

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           VK ++ G  F FG +R G   +L++      F    ++E + NK Q +SSS I   ++ G
Sbjct: 117 VKQIVCGPDFCFGHNRMGSIAMLKE-----NFAVSVVEERKINK-QKISSSLITELISDG 170

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTS 237
           +++ A  LL  ++   +++   +                  + LK G+Y +    +D   
Sbjct: 171 NIIEANKLLLEKYAFITNINRFKFTY-----------PQNLVKLKAGIYCVNVVIKDIE- 218

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEI----YGQRCTVSFFDYLRPEIKFKDI-- 291
           Y GV    ++    P+    L + ++ F  +I    Y +   + F   +R       +  
Sbjct: 219 YHGVCLIKKS---KPDDEQTLINKLYLFDLKIIPSKY-EEIFIEFEKSIR---YISSLAS 271

Query: 292 EKLKIYMGEDEKKARKILESS 312
             L     +D + A+K  E++
Sbjct: 272 NDL---FEKDLQAAQKFFENN 289


>gi|123390012|ref|XP_001299812.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
 gi|121880739|gb|EAX86882.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
          Length = 134

 Score =  116 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 6/126 (4%)

Query: 191 TIESDVIHGEKI-GRTLGFPTANMQLS--PDILLKE--GVYAIRFRTQDQTSYSGVANFG 245
               +VIHG       LGFPTAN+      + +     GVY    R +   +   V + G
Sbjct: 6   QFSGEVIHGFGRGSTKLGFPTANIDPKSWDEKVNPNEYGVYCGLVRVRHDPNRFCVFSIG 65

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           +NPT     P   E  I DF+ +IYG+  TV    Y+RP I F  I  L   +  D + A
Sbjct: 66  KNPTFQTEEP-TFEVHILDFNDDIYGEIITVEVLAYIRPMITFNSIGDLIKQITTDCQTA 124

Query: 306 RKILES 311
           R  L  
Sbjct: 125 RDTLSQ 130


>gi|194899378|ref|XP_001979237.1| GG24851 [Drosophila erecta]
 gi|190650940|gb|EDV48195.1| GG24851 [Drosophila erecta]
          Length = 153

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    G Y       +   Y 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVYK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSVGWNP-FYNNKEKSVETHMLHDFNCDLYGQILKICIVGYLRPERSFDSLEALIAAI 120

Query: 299 GEDEKKARKILESS 312
            ED ++A+  L+ +
Sbjct: 121 REDIEQAKAFLDEA 134


>gi|331703122|ref|YP_004399809.1| riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           capri LC str. 95010]
 gi|328801677|emb|CBW53830.1| Riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           capri LC str. 95010]
          Length = 250

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           I+ AL    + +   + G+ +T    V H   +GRT+GFPTAN+  +  +++K GVY ++
Sbjct: 110 IKKALINADINSFYKIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLVIKNGVYLVK 169

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
               D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K  
Sbjct: 170 VIIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKIN 225

Query: 290 DIEKLKIYMGEDEKKARKILES 311
            +++LK  +  D+K+  K LE 
Sbjct: 226 SLDQLKTLLNNDKKECLKRLEK 247


>gi|256383947|gb|ACU78517.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384779|gb|ACU79348.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455257|gb|ADH21492.1| riboflavin kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 250

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIR 229
           I+ AL    +     + G+ +T    V H   +GRT+GFPTAN+  +  +++K GVY ++
Sbjct: 110 IKKALINADINTFYKIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLVIKNGVYLVK 169

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
               D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K  
Sbjct: 170 VIIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKIN 225

Query: 290 DIEKLKIYMGEDEKKARKILES 311
            +++LK  +  D+K+  K LE 
Sbjct: 226 SLDQLKTLLNNDKKECLKRLEK 247


>gi|195445599|ref|XP_002070399.1| GK11049 [Drosophila willistoni]
 gi|194166484|gb|EDW81385.1| GK11049 [Drosophila willistoni]
          Length = 152

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 7/141 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    GVY       +   + 
Sbjct: 2   LSRLPLYTCGEIVRGFGRGSKELGIPTANYPLDVVKSLPESLPTGVYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  +F+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSIGWNP-FYNNTEKSVETHMLHEFNCDLYGQILKICMVGYLRPERSFDSLEALITAI 120

Query: 299 GEDEKKARKILESSYPLSERD 319
             D  +A+++L +   +  ++
Sbjct: 121 KTDIDQAKELLSTPETMKLQE 141


>gi|313638976|gb|EFS03991.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
           seeligeri FSL S4-171]
          Length = 185

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L+P   +E+ L   G + LI   FT + A  + EQF++   +  L +  +I G++F FG
Sbjct: 10  MLTPRMEKERWLAHFGVNHLIETAFTPKYAETTPEQFVESH-LSQLNLSHIIVGSEFNFG 68

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R  D  +L+     Y      +  +  N+   +SS+NIR  + +G+   A  LLG+ +
Sbjct: 69  KGRDSDVELLRDLCVPYNIGVTSVPVIETNQ-TKISSTNIRAFIRRGYFQEAEELLGHPW 127

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            I   V +GE            + L   +L   G Y
Sbjct: 128 YITGMVENGEM-----------IDLDDYVLPATGEY 152


>gi|62858727|ref|NP_001016959.1| riboflavin kinase [Xenopus (Silurana) tropicalis]
 gi|89266925|emb|CAJ82257.1| riboflavin kinase [Xenopus (Silurana) tropicalis]
          Length = 154

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN      D L  +   G+Y    +  +   + 
Sbjct: 1   MKTLPYFCRGEVVKGFGRGSKELGIPTANFAEKIVDRLPADISTGIYYGWGQVGNGEVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I  D+ ++ YG+  ++    Y+RPE  F  ++ L   +
Sbjct: 61  MVMSIGWNP-FYKNTKKSMETHIIHDYMKDFYGEILSIVIAGYIRPEKSFDSLDALISAI 119

Query: 299 GEDEKKARKILESSYPLSERDRIIC 323
             D ++A+K LE     + RDR  C
Sbjct: 120 YSDIEEAKKRLELPEYQALRDRFFC 144


>gi|149006214|ref|ZP_01829926.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761991|gb|EDK68953.1| riboflavin biosynthesis protein RibF [Streptococcus pneumoniae
           SP18-BS74]
          Length = 145

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 6/140 (4%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
           M +   I+  + +       VV +G FDGIH GH  +   A K A     PI V++FN  
Sbjct: 1   MIITIPIKNQKDI-GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNES 59

Query: 59  PRTIIQSSSP--IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           P+  ++   P     +  P+ +E+ L++ G   L    F+ + A+ +A++F     ++ +
Sbjct: 60  PKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATY-IKAM 118

Query: 117 EVKTVITGTKFRFGKDRAGD 136
             K ++ G  + FG D+   
Sbjct: 119 NAKIIVAGFDYTFGSDKKNS 138


>gi|195157380|ref|XP_002019574.1| GL12140 [Drosophila persimilis]
 gi|198454978|ref|XP_001359802.2| GA15482 [Drosophila pseudoobscura pseudoobscura]
 gi|194116165|gb|EDW38208.1| GL12140 [Drosophila persimilis]
 gi|198133040|gb|EAL28954.2| GA15482 [Drosophila pseudoobscura pseudoobscura]
          Length = 155

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    GVY           + 
Sbjct: 2   LNQLPLYASGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLLTGVYYGWANVDSGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  +F+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSVGWNP-FYNNTEKSVETHMLHEFNCDLYGQLLKICIVGYLRPEKSFDSLEALITAI 120

Query: 299 GEDEKKARKILES 311
             D + A+  LES
Sbjct: 121 KADIEHAKAHLES 133


>gi|24644927|ref|NP_649749.2| CG2846 [Drosophila melanogaster]
 gi|41017592|sp|O76206|RIFK_DROME RecName: Full=Putative riboflavin kinase; AltName:
           Full=ATP:riboflavin 5'-phosphotransferase; AltName:
           Full=Flavokinase
 gi|3213202|gb|AAC39087.1| similar to C. elegans R10H10.6 and S. cerevisiae YD8419.03c
           [Drosophila melanogaster]
 gi|7298960|gb|AAF54164.1| CG2846 [Drosophila melanogaster]
 gi|17945940|gb|AAL49015.1| RE45482p [Drosophila melanogaster]
 gi|211938651|gb|ACJ13222.1| FI08805p [Drosophila melanogaster]
 gi|220949082|gb|ACL87084.1| CG2846-PA [synthetic construct]
 gi|220958164|gb|ACL91625.1| CG2846-PA [synthetic construct]
          Length = 153

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    G Y       +   + 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSIGWNP-FYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 299 GEDEKKARKILESS 312
             D ++A+  L+ +
Sbjct: 121 RGDIEQAKAFLDEA 134


>gi|195498636|ref|XP_002096608.1| GE25761 [Drosophila yakuba]
 gi|194182709|gb|EDW96320.1| GE25761 [Drosophila yakuba]
          Length = 153

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    G Y       +   + 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSVGWNP-FYNNKEKSVETHMLHDFNCDLYGQILKICIVGYLRPERSFDSLEALIAAI 120

Query: 299 GEDEKKARKILESS 312
             D ++A+  L+ +
Sbjct: 121 RLDIEQAKAFLDEA 134


>gi|313664990|ref|YP_004046861.1| riboflavin kinase / FAD synthetase [Mycoplasma leachii PG50]
 gi|312950010|gb|ADR24606.1| riboflavin kinase / FAD synthetase [Mycoplasma leachii PG50]
          Length = 250

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 4/141 (2%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           + AL    + +  ++ G+ +T    V H   +GRT+ FPTAN+  +  +++K GVY ++ 
Sbjct: 111 KQALINADINSFYNIAGFNYTFSGIVTHCNHLGRTINFPTANILTNDSLVIKNGVYLVKV 170

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
              D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K   
Sbjct: 171 IIDDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKINS 226

Query: 291 IEKLKIYMGEDEKKARKILES 311
           +E+LK  +  D+K+  K LE 
Sbjct: 227 LEQLKTLLNNDKKECLKRLEK 247


>gi|16768454|gb|AAL28446.1| GM04958p [Drosophila melanogaster]
          Length = 153

 Score =  112 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   +G PTAN  L     L E    G Y       +   + 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKEMGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSIGWNP-FYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 299 GEDEKKARKILESS 312
             D ++A+  L+ +
Sbjct: 121 RGDIEQAKAFLDEA 134


>gi|195110613|ref|XP_001999874.1| GI22835 [Drosophila mojavensis]
 gi|193916468|gb|EDW15335.1| GI22835 [Drosophila mojavensis]
          Length = 149

 Score =  112 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
              +  +++ G   G   LG PTAN  L     L E    GVY    +  D   Y  V +
Sbjct: 6   PIYVSGEIVRGFGRGSKELGIPTANFSLDVVKSLPESLQTGVYYGWAKVNDSEVYKMVLS 65

Query: 244 FGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    LE+  +  F+ ++YG+   +    YLRPE  FK ++ L   +  D 
Sbjct: 66  VGWNP-FYNNKEKSLETHIMHKFNCDLYGRTLRICIVGYLRPEQNFKSLDDLIKAIKSDI 124

Query: 303 KKARKILESSYP 314
           + A  +L+ +  
Sbjct: 125 EAATTLLDEAEN 136


>gi|42560665|ref|NP_975116.1| riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|42492161|emb|CAE76758.1| Riboflavin kinase / FAD synthetase [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|301321051|gb|ADK69694.1| putative riboflavin biosynthesis protein RibF [Mycoplasma mycoides
           subsp. mycoides SC str. Gladysdale]
          Length = 250

 Score =  112 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 4/141 (2%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           + AL    + +  ++ G+ +T    V H   +GRT+ FPTAN+  +  +++K GVY ++ 
Sbjct: 111 KQALINADINSFYNIAGFNYTFSGIVTHCNHLGRTINFPTANILTNDSLVIKNGVYLVKV 170

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
              D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K   
Sbjct: 171 IIDDKNIQFGMGDHWIN----KNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKINS 226

Query: 291 IEKLKIYMGEDEKKARKILES 311
           +E+LK  +  D+K+  K LE 
Sbjct: 227 LEQLKTLLNNDKKECLKRLEK 247


>gi|195569071|ref|XP_002102535.1| GD19451 [Drosophila simulans]
 gi|194198462|gb|EDX12038.1| GD19451 [Drosophila simulans]
          Length = 153

 Score =  112 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    G Y       +   + 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSVGWNP-FYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 299 GEDEKKARKILESS 312
             D ++A+  L+ +
Sbjct: 121 RGDIEQAKAFLDEA 134


>gi|83320034|ref|YP_424057.1| riboflavin kinase / FAD synthetase family protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283920|gb|ABC01852.1| riboflavin kinase / FAD synthetase family protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 250

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 4/141 (2%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
           + +L    + +  ++ G+ +T    V H   +GRT+GFPTAN+  +  +++K GVY ++ 
Sbjct: 111 KQSLVNADINSFYNIAGFNYTFSGIVTHCNHLGRTIGFPTANILTNDSLVIKNGVYLVKV 170

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
              D+    G+ +   N     N   + E++IF+FS +IY  + T    DY+R   K   
Sbjct: 171 IIGDKNIQFGMGDHWIN----RNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKINS 226

Query: 291 IEKLKIYMGEDEKKARKILES 311
           +++LK  +  D+K+  K +E 
Sbjct: 227 LDQLKTLLNNDKKECLKRMEK 247


>gi|195344336|ref|XP_002038744.1| GM10446 [Drosophila sechellia]
 gi|194133765|gb|EDW55281.1| GM10446 [Drosophila sechellia]
          Length = 153

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           L         +++ G   G   LG PTAN  L     L E    G Y       +   + 
Sbjct: 2   LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +  DF+ ++YGQ   +    YLRPE  F  +E L   +
Sbjct: 62  MVLSVGWNP-FYNNKERSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAI 120

Query: 299 GEDEKKARKILESS 312
             D ++A+  L+ +
Sbjct: 121 RGDIEQAKASLDEA 134


>gi|168051019|ref|XP_001777954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670714|gb|EDQ57278.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 335

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 32/232 (13%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL- 82
           +G FD +H+GH  + E A +I       ++SF      ++     +  ++    + +++ 
Sbjct: 69  LGKFDALHVGHRALAEHAAEI---GAPFLVSFAGM-AEVLGWEVRLPVVARC-DRARVMS 123

Query: 83  ---EKMGFSAL---IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
              E  G   +      +F+    + S EQF++K+  E L+VK V+ G  +RFG   AGD
Sbjct: 124 LWAEHCG-DVVPQEYMLEFSK-VRSLSPEQFVEKLASE-LKVKGVVAGANYRFGYKAAGD 180

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQ--------------IVSSSNIRTALTKGHVLNA 182
              L +  ++YG  +  ++ + +                   VS++ +R AL  G +   
Sbjct: 181 ASDLVRLCQEYGLQSAIVNPIMDASEMSSPVLVDDSSREKGQVSTTRVRKALANGDMKRV 240

Query: 183 AHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           A LLG R  +        +    +  P  N    P    + G Y   F  + 
Sbjct: 241 AELLGRRHRLVIRPDKYVRRDNLISVPAVNALNQP---PRIGSYECSFVLEG 289


>gi|38606212|gb|AAR25146.1| macrolide-efflux protein [Streptococcus agalactiae]
          Length = 101

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 214 QLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQR 273
            ++   L  +GVY           Y  + + G+N T      L LE+ IFDF  +IYG+ 
Sbjct: 2   PINRTYLPADGVYISNVLING-KYYRAMTSIGKNITF-GGTELRLEANIFDFDGDIYGET 59

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315
             + +   +R  +KF  I+ L   + +D++ A    + S  L
Sbjct: 60  IEIFWLKRIREMVKFNGIDDLVKQLKKDKEIALNWKKDSQTL 101


>gi|294460313|gb|ADE75738.1| unknown [Picea sitchensis]
          Length = 382

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN----------AAHLLGYRFTIES 194
           +  G   V +  ++   S    ++ +   L                 A  L    + I  
Sbjct: 183 KAAGMEVVAVPSIKKQASLYTEANCVLNCLFDLRPERWGLPPFEDWIANSLPIEPWYIGG 242

Query: 195 DVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+        L +   GVY        +  Y  V + G NP 
Sbjct: 243 PVIKGFGRGSKILGIPTANLSADELSSTLAQQACGVYLGWAGLSTRGIYKMVMSIGWNP- 301

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F ++ YG+   +    Y+RPE KF  +E L   + ED + A + 
Sbjct: 302 FFDNTKKTIEPWLLHEFDEDFYGEELRLVVVGYIRPEAKFPSLEALIEKIHEDRRIAEEA 361

Query: 309 LE 310
           L+
Sbjct: 362 LD 363


>gi|325067092|ref|ZP_08125765.1| riboflavin biosynthesis protein RibF [Actinomyces oris K20]
          Length = 123

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 210 TANMQLS-PDILLKEGVYAIRFRTQ-----DQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
           TAN++ +   ++  +GVYA           D        + G NPT        +E+ + 
Sbjct: 1   TANLEAATAGVVPPDGVYAGWLIRGCADEGDVQRLPAAISIGTNPTFDDVPQRTVEAHVL 60

Query: 264 DF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYP 314
                 +YG+   V   + LRP + F  ++ L + M  D +   +IL    P
Sbjct: 61  GRADLNLYGEEVGVELVERLRPMLAFDGLDALLVQMRADIEDTARILGVPVP 112


>gi|297477898|ref|XP_002689713.1| PREDICTED: riboflavin kinase [Bos taurus]
 gi|296484743|gb|DAA26858.1| riboflavin kinase [Bos taurus]
          Length = 288

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 7/144 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    +     V+ G   G   LG PTAN  +   D L  +   G+Y       +   + 
Sbjct: 134 MRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGNGDVHK 193

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 194 MVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAI 252

Query: 299 GEDEKKARKILESSYPLSERDRII 322
             D ++A+K L+    L  ++   
Sbjct: 253 QGDIEEAKKRLDLPEHLKLKEDKF 276


>gi|297467363|ref|XP_592590.5| PREDICTED: riboflavin kinase [Bos taurus]
          Length = 339

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 7/144 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    +     V+ G   G   LG PTAN  +   D L  +   G+Y       +   + 
Sbjct: 185 MRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGNGDVHK 244

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 245 MVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAI 303

Query: 299 GEDEKKARKILESSYPLSERDRII 322
             D ++A+K L+    L  ++   
Sbjct: 304 QGDIEEAKKRLDLPEHLKLKEDKF 327


>gi|74354693|gb|AAI02763.1| RFK protein [Bos taurus]
          Length = 234

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 7/144 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    +     V+ G   G   LG PTAN  +   D L  +   G+Y       +   + 
Sbjct: 80  MRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGNGDVHK 139

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 140 MVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLRPEKNFDSLEALISAI 198

Query: 299 GEDEKKARKILESSYPLSERDRII 322
             D ++A+K L+    L  ++   
Sbjct: 199 QGDIEEAKKRLDLPEHLKLKEDKF 222


>gi|324997427|ref|ZP_08118539.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Pseudonocardia sp. P1]
          Length = 199

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 12/166 (7%)

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++ +      LS    + ++    G  A+   +FT E A  + ++F ++VLV  L    
Sbjct: 1   RVLGTGRDTAALSTLGHRAELAADAGADAVCVLRFTRELAARTPQEFAREVLVAGLRAAA 60

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           V+ G  F FG   AG  G L++ G + GF    +D L+       SS++ R  L  G + 
Sbjct: 61  VVVGADFTFGARGAGTVGTLRELGRELGFTAHGVDLLQE-AGTTCSSTHARRCLRAGDLP 119

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
            A   LG    +                    +      L   G Y
Sbjct: 120 GAERALGRPHRVHGQRRSDRV-----------VLEPDTALPPPGRY 154


>gi|50365150|ref|YP_053575.1| riboflavin kinase [Mesoplasma florum L1]
 gi|50363706|gb|AAT75691.1| riboflavin kinase [Mesoplasma florum L1]
          Length = 274

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           + P    E+  + +    ++ + F  E        +  + + + L ++ V          
Sbjct: 59  IIPNKGIEQKAKDLDCELVLWHSFNQE--------YNYERIKQDLNIQKVYL-FD----- 104

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
               +   L K    +   T+   + + N     S       L  G +    +L G+ F 
Sbjct: 105 ----NNSDLAKIETAFEDKTIIKYDEKLNNDIKKS----EEFLKLGKIQEYKNLNGFNFG 156

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRT-QDQTSYSGVANFGRNPTM 250
            +  V HG  IGRT+ +PTAN+ ++ +++LKE VY    +   D+ +Y  ++ +  N   
Sbjct: 157 FKGFVEHGNHIGRTINYPTANIIINDELILKEAVYLTTTKLPNDEKAYPSISAYWTN--- 213

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             NG  + ES I DF Q+IYG    V   D++R  IK  ++++LK  + +D+  A K  +
Sbjct: 214 -KNGVNVFESHILDFDQDIYGWGIDVEIIDFIRESIKVNNLDELKDLLNQDKAYAIKHFK 272


>gi|22326656|ref|NP_568192.2| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|17380946|gb|AAL36285.1| unknown protein [Arabidopsis thaliana]
 gi|20258953|gb|AAM14192.1| unknown protein [Arabidopsis thaliana]
 gi|197258080|gb|ACH56224.1| RibF2 [Arabidopsis thaliana]
 gi|332003903|gb|AED91286.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 367

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 51/308 (16%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 79  NCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGAPYLLSFVGMAE 138

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSI-QEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL + P    + +        S  S   ++  E+         +F     + +  QF++K
Sbjct: 139 VLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEE------YEIEF-ASVRHLTPRQFVEK 191

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN----------- 159
           +  E L V  V+ G  +RFG   +GD   L +  E+ G     I+ + +           
Sbjct: 192 LSKE-LRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSG 250

Query: 160 --NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK-IGRTLGFPTANMQLS 216
                  VSS+ +R AL  G +   + LLG    +   V   +    R +  P +++   
Sbjct: 251 DSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPSERMISVPRSSIL-- 308

Query: 217 PDILLKEGVY-AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES-----FIFDFSQEIY 270
            ++    G+Y A      D++S            +V    + +E+        D+SQE  
Sbjct: 309 -NLPPGIGIYKACLLLVGDESSVPCTV-------VVDTSNIHVETEEVRLCNLDWSQEF- 359

Query: 271 GQRCTVSF 278
            +  +V F
Sbjct: 360 -RLVSVEF 366


>gi|303278446|ref|XP_003058516.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459676|gb|EEH56971.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 335

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 34/245 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             +VA+G FD +H GH  +   A+     +P  V SF      ++  +  +  ++    +
Sbjct: 37  KTIVALGKFDAMHRGHARL--AAVAAGMGAPYLV-SFGGM-AEVLGWTPTLPVVAT-EDR 91

Query: 79  EKILEKMGFSALI-------RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           E++ E      L+          F       S E+F++ +  + + V  V+ G  +RFG 
Sbjct: 92  ERVCELWRAEGLVSRELREHAIPF-AAIRRMSPEEFVKTL--KDIGVGGVVAGRNYRFGF 148

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ----------IVSSSNIRTALTKGHVLN 181
             AG    L   GEK       +D L  +  +           VSS+ +R  L  G V  
Sbjct: 149 KAAGTADTLVDLGEKLDVDVSIVDLLPADIEEDFDCPGGCTPQVSSTRVRACLAAGDVEQ 208

Query: 182 AAHLLGYRFTIESDV------IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ 235
              LLG    +   V      +  +     + F    +  + +     GVYA+R   ++ 
Sbjct: 209 CNALLGRPHRLVMSVDDVAADVSFDASDTEIAFA---LASARNQYPAPGVYAVRAAMREI 265

Query: 236 TSYSG 240
              +G
Sbjct: 266 VEIAG 270


>gi|295400092|ref|ZP_06810072.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977871|gb|EFG53469.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 127

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQS-SSPIFTLSPP 75
             V A+G FDG+HLGH  +++   K+A        V+SF PHP+ II      +  L PP
Sbjct: 19  PAVAALGFFDGVHLGHQKVIQTTKKLAEKMGLKTAVISFFPHPKEIIGKTGERVHYLLPP 78

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           + + K   ++G       +FT E A    ++F+QK+ 
Sbjct: 79  AEKAKKFSRLGVDYFYLIRFTPEFARLEPKEFVQKIF 115


>gi|42567011|ref|NP_193878.2| ATFMN/FHY (riboflavin kinase/FMN hydrolase); FMN
           adenylyltransferase/ riboflavin kinase [Arabidopsis
           thaliana]
 gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana]
 gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana]
 gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana]
 gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana]
          Length = 379

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA----------AHLLGYRFTIES 194
           +  G   + +  L        S+  +  +L    +               L    + I  
Sbjct: 184 KAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+         +    GVY        +  +  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  DF+++ YG+   +    Y+RPE  F  +E L   + ED + A K 
Sbjct: 304 FN-NKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKA 362

Query: 309 LE 310
           L+
Sbjct: 363 LD 364


>gi|123446039|ref|XP_001311774.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
 gi|121893596|gb|EAX98844.1| Riboflavin kinase / FAD synthetase family protein [Trichomonas
           vaginalis G3]
          Length = 139

 Score =  109 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 6/127 (4%)

Query: 191 TIESDVIHGEKI-GRTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFG 245
                V+ G +   R LGFPTAN+      +       GVY       +   Y  V + G
Sbjct: 6   HFSGTVVKGFQRGSRQLGFPTANIDPKSWTIDLSEDDFGVYCGICSINNGPEYKCVFSIG 65

Query: 246 RNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           +N T     P   E  I +F ++IYG++ TV    ++R    FK IE LK  + +D  + 
Sbjct: 66  KNVTFEMTTP-TFEVHILNFDEDIYGEKITVYVHHFIRKMRAFKSIEDLKSRISQDCCET 124

Query: 306 RKILESS 312
                 +
Sbjct: 125 TNFFSKN 131


>gi|255552551|ref|XP_002517319.1| protein-s isoprenylcysteine O-methyltransferase, putative [Ricinus
           communis]
 gi|223543582|gb|EEF45112.1| protein-s isoprenylcysteine O-methyltransferase, putative [Ricinus
           communis]
          Length = 294

 Score =  109 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 33/234 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L GG+VA+G FD +H+GH  +  QA K+       +LSF      +     P   +    
Sbjct: 19  LAGGIVALGKFDALHIGHRELAIQASKVGTPY---LLSFVGM-AEVFGWE-PRAPIVAKC 73

Query: 77  IQEKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
            + ++L         +   +F ++ ++    + +QF++K+  E L V  V+ G  +RFG 
Sbjct: 74  DRNRVLASWAQYCDNITPLEFQIQFSSVRHLNPQQFVEKLSKE-LRVCGVVAGENYRFGY 132

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNN-------------KSQIVSSSNIRTALTKGH 178
             AGD   L +  E+YG     I+ + +N                 VSS+ +R AL  G 
Sbjct: 133 KAAGDASDLVRLCEEYGLGAYIINSVMDNKKDPINSNSRDSKDRGQVSSTRVRQALALGD 192

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIG------RTLGFPTANMQLSPDILLKEGVY 226
           +   + LLG R  +   +     +         +  P + +    ++  K+G Y
Sbjct: 193 MKYVSKLLGRRHRLMLMLKDQRGLTSSSSSRWRISAPKSCLL---NLPPKDGFY 243


>gi|297806875|ref|XP_002871321.1| hypothetical protein ARALYDRAFT_487667 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317158|gb|EFH47580.1| hypothetical protein ARALYDRAFT_487667 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 367

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 37/259 (14%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 79  NCFSQREDDTELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGTPYLLSFVGMAE 138

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSI-QEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL + P    + +        S  S   ++  E+         +F     + + +QF++K
Sbjct: 139 VLGWEPRAPIVAKCDRKRVLTSWASYCGDRAPEEH------EIEF-ASVRHLTPQQFVEK 191

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN----------- 159
           +  E L V  V+ G  +RFG   +GD   L +  E+YG     I+ + +           
Sbjct: 192 LSKE-LRVCGVVAGENYRFGYKASGDAFELVRLCEEYGITAYIINSVMDKKQGSGKRDSG 250

Query: 160 --NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK-IGRTLGFPTANMQLS 216
                  VSS+ +R AL  G +   + LLG    +   V   +    R +  P +++   
Sbjct: 251 DSKDRGQVSSTRVRQALAAGDMKYVSELLGRAHRLILRVRTQDMPSERMISVPRSSIL-- 308

Query: 217 PDILLKEGVY-AIRFRTQD 234
            ++    G+Y A      D
Sbjct: 309 -NLPPGNGIYKACLLLVGD 326


>gi|311894916|dbj|BAJ27324.1| hypothetical protein KSE_14970 [Kitasatospora setae KM-6054]
          Length = 146

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQT-SYSGV 241
                   +   V+HG   G+ LGFPTAN+   P  ++    +Y+           +   
Sbjct: 3   EHAPLPPPLAGTVVHGAGRGKGLGFPTANLAPVPGTVVPPPAIYSGWLARPATGGVHRAT 62

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            + G NPT   +  + +E    D S ++YG+R  + F   LR   +F  ++ L     ED
Sbjct: 63  VSIGTNPTFGDSSEVHVEVHCHDTSDDLYGERVELWFVARLRDTERFATVDALLAAARED 122

Query: 302 EKKARKILESSYPLSER 318
            +++  +L S   L  R
Sbjct: 123 VRRSDALLASPAGLRAR 139


>gi|297742760|emb|CBI35394.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 30/229 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           GG+VA+G FD +H+GH  +   AI+ +      +LSF      ++    P   +     +
Sbjct: 74  GGIVALGKFDALHIGHREL---AIQASRVGAPFLLSFVGM-AEVLGWE-PRAPIVAKCDR 128

Query: 79  EKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           +++L         +   +F +E ++    +  QF++K+  E L V+ V+ G  +RFG   
Sbjct: 129 KRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKE-LGVRGVVAGENYRFGYKA 187

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQ-------------IVSSSNIRTALTKGHVL 180
           AGD   L +  E++G     I  + +N                 VSS+ +R AL+ G + 
Sbjct: 188 AGDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERGQVSSTRVRHALSIGDMK 247

Query: 181 NAAHLLGYRFTIE---SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
             + LLG +  +                +  P + +    ++  KEG+Y
Sbjct: 248 YVSELLGRQHRLILTAQYQEAFTSSKHKVSAPKSCLL---NLPPKEGLY 293


>gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata]
 gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA----------AHLLGYRFTIES 194
           +  G + + +  L        S+  +  +L                    L    + I  
Sbjct: 184 KAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQDWIENTLPIDPWHIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+         +    GVY        +  +  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  DF+++ YG+   +    Y+RPE  F  +E L   + ED + A K 
Sbjct: 304 FN-NKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKA 362

Query: 309 LE 310
           L+
Sbjct: 363 LD 364


>gi|42573309|ref|NP_974751.1| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|332003904|gb|AED91287.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 351

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 37/264 (14%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 79  NCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGAPYLLSFVGMAE 138

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSI-QEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL + P    + +        S  S   ++  E+         +F     + +  QF++K
Sbjct: 139 VLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEE------YEIEF-ASVRHLTPRQFVEK 191

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN----------- 159
           +  E L V  V+ G  +RFG   +GD   L +  E+ G     I+ + +           
Sbjct: 192 LSKE-LRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSG 250

Query: 160 --NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK-IGRTLGFPTANMQLS 216
                  VSS+ +R AL  G +   + LLG    +   V   +    R +  P +++   
Sbjct: 251 DSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPSERMISVPRSSIL-- 308

Query: 217 PDILLKEGVY-AIRFRTQDQTSYS 239
            ++    G+Y A      D++S  
Sbjct: 309 -NLPPGIGIYKACLLLVGDESSVP 331


>gi|145349408|ref|XP_001419126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579357|gb|ABO97419.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 175

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V +G FD +H GH  + E+A    +   + V+SF+    T+         ++ PS + ++
Sbjct: 1   VCLGKFDAMHRGHLALAERAATRGD---VVVVSFSGMAETL--GWETRLPITAPSDRSRV 55

Query: 82  LEKM-GFSALIRYKFTLET---ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           L    G +     +  L        S E F++ +    + V  V+TG  +RFG   AGD 
Sbjct: 56  LAMWSGTTGAAVSEHALAFGDVRELSPEAFVEMLA--RMGVGAVVTGKNYRFGYKAAGDV 113

Query: 138 GILQKRGEKYGFHTVFIDEL------RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
             L++ GE  G     +D +             VSSS IR+AL+ G +     +LG    
Sbjct: 114 EALKRFGEANGLTVDVVDLVPARRPSSAGLGDQVSSSRIRSALSAGDIDEVNEMLGREHR 173

Query: 192 IE 193
           + 
Sbjct: 174 VV 175


>gi|194743512|ref|XP_001954244.1| GF16845 [Drosophila ananassae]
 gi|190627281|gb|EDV42805.1| GF16845 [Drosophila ananassae]
          Length = 154

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 8/134 (5%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           V    +  + LG PTAN  L     L E    G Y       +   +  V + G NP   
Sbjct: 15  VRGFGRGSKELGIPTANFPLEVVKALPESLPTGAYYGWANVNNGEVHKMVLSIGWNP-FY 73

Query: 252 PNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            N    +E+ +  DF+ ++YG    +    YLRPE  F+ +++L   +  D  KA+ +L+
Sbjct: 74  NNKEKSVETHMLHDFNCDLYGNTLKICIVGYLRPERSFESLQELIDAIQGDITKAKVLLD 133

Query: 311 SSYPLSERDRIICF 324
              P + + +  CF
Sbjct: 134 E--PENAKLKEACF 145


>gi|297808337|ref|XP_002872052.1| hypothetical protein ARALYDRAFT_489194 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317889|gb|EFH48311.1| hypothetical protein ARALYDRAFT_489194 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 353

 Score =  107 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 45/249 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIFTL 72
           GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +        
Sbjct: 81  GGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGMAEVLGWKPRAPIVAKCDRKRVLS 140

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           S  S         G   +   +F +E A+    + +QF++K+  E L V  V+ G  +RF
Sbjct: 141 SWASY-------CG--NVAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGENYRF 190

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ----------------IVSSSNIRTA 173
           G   +GD   L +  ++YG     I+ + +                     VSS+ +R A
Sbjct: 191 GYRASGDASELVRLCKEYGISAYIINSVMDKNQVSGNTDTEEDSKSKERGQVSSTRVRHA 250

Query: 174 LTKGHVLNAAHLLGYRFTI----ESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY-AI 228
           L  G V     LLG    +     +  +  +    TL   T+++    ++    GVY A 
Sbjct: 251 LAAGDVRYVTELLGRPHRVLSRARTQDLTSKGRRVTLH--TSSLL---NLPPGNGVYKAC 305

Query: 229 RFRTQDQTS 237
                D+  
Sbjct: 306 SLIVGDKHP 314


>gi|225463681|ref|XP_002273393.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 275

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 30/229 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           GG+VA+G FD +H+GH  +   AI+ +      +LSF      ++    P   +     +
Sbjct: 5   GGIVALGKFDALHIGHREL---AIQASRVGAPFLLSFVGM-AEVLGWE-PRAPIVAKCDR 59

Query: 79  EKILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           +++L         +   +F +E ++    +  QF++K+  E L V+ V+ G  +RFG   
Sbjct: 60  KRVLSSWAPLCGNVTPLEFLIEFSSVRHLTPRQFVEKLYKE-LGVRGVVAGENYRFGYKA 118

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQ-------------IVSSSNIRTALTKGHVL 180
           AGD   L +  E++G     I  + +N                 VSS+ +R AL+ G + 
Sbjct: 119 AGDSSELVRLCEEFGMGAYIIKPVMDNNQDSRNTASSNSKERGQVSSTRVRHALSIGDMK 178

Query: 181 NAAHLLGYRFTIE---SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
             + LLG +  +                +  P + +    ++  KEG+Y
Sbjct: 179 YVSELLGRQHRLILTAQYQEAFTSSKHKVSAPKSCLL---NLPPKEGLY 224


>gi|195036792|ref|XP_001989852.1| GH19022 [Drosophila grimshawi]
 gi|193894048|gb|EDV92914.1| GH19022 [Drosophila grimshawi]
          Length = 152

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK----EGVYAIRFRTQDQTSYSGVAN 243
                 +++ G   G   LG PTAN+       L      GVY       +   +  V +
Sbjct: 6   PICACGEIVRGFGRGSKELGIPTANLAHEVVKSLPAALHTGVYYGWASVNNGDVHKMVLS 65

Query: 244 FGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+  + +++ ++YGQ   +    YLRPE  F  +E L   +  D 
Sbjct: 66  VGWNP-FYNNKEKSVETHIMHNYNCDLYGQMLKICITGYLRPEQNFDSVEALIAVIKSDI 124

Query: 303 KKARKILES 311
           +KA+ +LE+
Sbjct: 125 EKAKTMLET 133


>gi|302788909|ref|XP_002976223.1| hypothetical protein SELMODRAFT_105011 [Selaginella moellendorffii]
 gi|300155853|gb|EFJ22483.1| hypothetical protein SELMODRAFT_105011 [Selaginella moellendorffii]
          Length = 372

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 25/187 (13%)

Query: 145 EKYGFHTVFIDELRNNKSQIV--SSSNIRTALTKGHVLN----------AAHLLGYRFTI 192
           +  G   V +  L +  S+ +  S+ +I ++L                 A  L    + I
Sbjct: 175 KAAGMKVVAVPSLPSKASRHLYASADHIISSLLDFKPELWGLPPFQDWIANALPIEPWYI 234

Query: 193 ESDVIHGEKIGRT-LGFPTANM-------QLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
              VI G   G   LG PTAN+       QL+  +    G+Y    R  D+  +  V + 
Sbjct: 235 SGPVIRGFGRGSKVLGIPTANLPTGAFSKQLAEQVC---GIYLGWARLSDKGVFKMVMSV 291

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP    N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED +
Sbjct: 292 GWNPYF-DNAEKTVEPWLLHEFPEDFYGEELRLIVVGYIRPEANFSSLEDLINKIHEDGR 350

Query: 304 KARKILE 310
            A+  L+
Sbjct: 351 IAKAALD 357


>gi|226495321|ref|NP_001151161.1| riboflavin kinase family protein [Zea mays]
 gi|195644710|gb|ACG41823.1| riboflavin kinase family protein [Zea mays]
          Length = 371

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 30/229 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           GG+VA+G FD +H+GH  +   A+  +      +LSF      ++  +     ++    +
Sbjct: 104 GGIVALGKFDALHIGHREL---AMHASKAGTPFLLSFVGM-AEVLGWTYRPPIVAHCDRK 159

Query: 79  EKILEKMG--FSALIRYKFTLETA---NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            ++L         ++  ++ +E +   + S  QF++++  + L +K V+ G  +RFG   
Sbjct: 160 -RVLSSWAPYCRNVVPLEYQVEFSKVRSLSPRQFVERLSKD-LRIKGVVAGENYRFGYKA 217

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRN---------------NKSQIVSSSNIRTALTKGH 178
           +GD   L K  E++G     +  + +               +    VSSS +R AL  G 
Sbjct: 218 SGDATELVKLCEEFGLSAFIVRSVMDTAKRSLNGFSGAINSSDKGQVSSSRVRHALAMGD 277

Query: 179 VLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           +   + LLG +  +   V  H     +++  P + M   P     EG+Y
Sbjct: 278 MEYVSELLGRKHRLLLMVNQHCLHEKKSIVLPNSCMLNMP---PAEGLY 323


>gi|332372790|gb|AEE61537.1| unknown [Dendroctonus ponderosae]
          Length = 151

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEG----VYAIRFRTQDQTSYSGVAN 243
               + +V+ G   G   LG PTAN        L +G    VY    +      +  V +
Sbjct: 7   PHFTKGEVVKGFGRGSKDLGIPTANFPQDVVNNLPDGLDTGVYYGFGQVDGGQVHGMVMS 66

Query: 244 FGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+  +  F  + YG+   V    YLRPE  F  ++ L   +  D 
Sbjct: 67  IGWNP-FYKNSKKSMETHLMHKFESDFYGKELRVVILGYLRPEQNFPGLDALIAAIDNDI 125

Query: 303 KKARKILE 310
           K+AR  LE
Sbjct: 126 KQARTRLE 133


>gi|307111715|gb|EFN59949.1| hypothetical protein CHLNCDRAFT_14012 [Chlorella variabilis]
          Length = 131

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 8/129 (6%)

Query: 189 RFTIESDVIHGEKI-GRTLGFPTANMQLSPDIL----LKEGVYAIRFRTQDQTSYSGVAN 243
              +   VIHG     + LG PTAN+  +P       L  GVY       D+  +  V N
Sbjct: 1   PIRLSGRVIHGFGRGSKKLGVPTANLPPAPLAQQLAELPAGVYFGWPE-ADRRVHKMVMN 59

Query: 244 FGRNPTMVPNGP-LLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            GR PT     P L +E+ +   +SQ+ Y Q   +    Y+RPE+KF  +++L   +  D
Sbjct: 60  IGRRPTFGDAEPELSVEAHVMHAYSQDFYDQPLRLVVLGYIRPEVKFGGLQELLARINTD 119

Query: 302 EKKARKILE 310
              AR  L+
Sbjct: 120 IGIARSQLD 128


>gi|311245929|ref|XP_003122015.1| PREDICTED: riboflavin kinase-like [Sus scrofa]
          Length = 241

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    +     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 87  MRNLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 146

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 147 MVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAI 205

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A+K L+    L  ++ 
Sbjct: 206 QGDIEEAKKQLDLPEHLKLKED 227


>gi|301111498|ref|XP_002904828.1| riboflavin kinase [Phytophthora infestans T30-4]
 gi|262095158|gb|EEY53210.1| riboflavin kinase [Phytophthora infestans T30-4]
          Length = 149

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           V    + G+ LG PTAN+      D+L  L  G+Y        +  Y  VA+ G NP   
Sbjct: 17  VEGFGRGGKQLGCPTANLSSKDLGDLLEQLPTGIYCGWATVDGKGPYKAVASIGWNPYF- 75

Query: 252 PNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            N    +E  +   F ++ YG +       Y+RPE+ F  +E L   + +D  ++ + L+
Sbjct: 76  KNKEKTVEPHLLHKFDKDFYGAQLKFLITGYIRPEMNFSSLESLIKAIQDDIAQSNEWLD 135

Query: 311 SSYPLS 316
           ++   S
Sbjct: 136 TTEGES 141


>gi|302810878|ref|XP_002987129.1| hypothetical protein SELMODRAFT_125384 [Selaginella moellendorffii]
 gi|300145026|gb|EFJ11705.1| hypothetical protein SELMODRAFT_125384 [Selaginella moellendorffii]
          Length = 372

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 25/187 (13%)

Query: 145 EKYGFHTVFIDELRNNKSQIV--SSSNIRTALTKGHVLN----------AAHLLGYRFTI 192
           +  G   V +  L +  S+ +  S+  I ++L                 A  L    + I
Sbjct: 175 KAAGMKVVAVPSLPSKASRHLYASADQILSSLLDFKPELWGLPPFQDWIANALPIEPWYI 234

Query: 193 ESDVIHGEKIGRT-LGFPTANM-------QLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
              VI G   G   LG PTAN+       QL+  +    G+Y    R  D+  +  V + 
Sbjct: 235 SGPVIRGFGRGSKVLGIPTANLPTGAFSKQLAEQVC---GIYLGWARLSDKGVFKMVMSV 291

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP    N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED +
Sbjct: 292 GWNPYF-DNAEKTVEPWLLHEFPEDFYGEELRLIVVGYIRPEANFSSLEDLINKIHEDGR 350

Query: 304 KARKILE 310
            A+  L+
Sbjct: 351 IAKAALD 357


>gi|296189805|ref|XP_002742926.1| PREDICTED: riboflavin kinase-like [Callithrix jacchus]
          Length = 162

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+HG   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVHGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSVETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K L+    L  ++ 
Sbjct: 131 EEAKKQLDLPEHLKIKED 148


>gi|326499237|dbj|BAK06109.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525355|dbj|BAK07947.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530464|dbj|BAJ97658.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530718|dbj|BAK01157.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 67/191 (35%), Gaps = 17/191 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA-----AHLLG-----YRFTIES 194
           +  G H + +  +     +  S+  I  +L                +        + I  
Sbjct: 184 KAAGMHVIAVPSVPKRTDEFSSADEIINSLLDLKPEKWGLPPFNDWIEGTLPIDPWFIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       +      GVY        +  Y  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGIPTANLAAENFSDILSEHTSGVYFGWAGLSKRGIYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++   F ++ YG+   +    Y+RPE  F  +E L   + ED + A   
Sbjct: 304 F-DNTEKTIEPWLLHGFDEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDGRIAENA 362

Query: 309 LESSYPLSERD 319
           L+       +D
Sbjct: 363 LDLPEYAKYKD 373


>gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFTIES 194
           +  G   V +  + N      S+  +  +L                    L    + I  
Sbjct: 184 KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       L      GVY        Q  Y  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + 
Sbjct: 304 FN-NTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERA 362

Query: 309 LE 310
           L+
Sbjct: 363 LD 364


>gi|194224744|ref|XP_001494854.2| PREDICTED: similar to riboflavin kinase [Equus caballus]
          Length = 260

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +    +V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 110 PYFCRGEVVRGFGRGSKQLGIPTANFPEQVVDNLPADLSTGIYYGWASVGSGDVHKMVVS 169

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 170 IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPERNFDSLESLISAIHGDI 228

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K L+    L  ++ 
Sbjct: 229 EEAKKRLDLPEHLKLKED 246


>gi|237756218|ref|ZP_04584782.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691628|gb|EEP60672.1| riboflavin biosynthesis protein RibF [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 111

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 203 GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
           GR LGFPT N++   D+ LK+GVYA     ++      V N+G  PT+      + E+ I
Sbjct: 2   GRELGFPTINLKPDDDLCLKKGVYAGFICYENLCQ-KAVINYGNRPTVDGTKTFM-EAHI 59

Query: 263 FDFSQEIYGQR---CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            +   +I+ +      + F  YLR E KF  +++LK  +  D +KA ++L  
Sbjct: 60  IE-DLKIHPKTNDYVKLIFKKYLREEKKFNSVDELKNQIKLDIQKALEVLNE 110


>gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFTIES 194
           +  G   V +  +        S+  +  +L                    L    + I  
Sbjct: 184 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQDWVEDTLPVEPWYIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       L      GVY        Q  Y  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + 
Sbjct: 304 FN-NTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERA 362

Query: 309 LE 310
           L+
Sbjct: 363 LD 364


>gi|225466457|ref|XP_002268247.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 230

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFTIES 194
           +  G   V +  + N      S+  +  +L                    L    + I  
Sbjct: 26  KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGG 85

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       L      GVY        Q  Y  V + G NP 
Sbjct: 86  PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 145

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED + A + 
Sbjct: 146 FN-NTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERA 204

Query: 309 LE 310
           L+
Sbjct: 205 LD 206


>gi|71896241|ref|NP_001026776.1| riboflavin kinase [Gallus gallus]
 gi|53127244|emb|CAG31021.1| hypothetical protein RCJMB04_1k1 [Gallus gallus]
          Length = 155

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGV 241
            +    +V+ G   G   LG PTAN   S  ++      +  G+Y           +  V
Sbjct: 5   PYFCRGEVVRGFGRGSKELGVPTAN--FSEQVVESFPSDISTGIYYGWACVGSGDVHKMV 62

Query: 242 ANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N    +E+ I   F ++ YG+  +++   Y+RPE  F  ++ L   + E
Sbjct: 63  LSIGWNP-FYKNTKKSVETHIIHTFKEDFYGEILSIAIVGYIRPEKNFDSLDALIAAIQE 121

Query: 301 DEKKARKILESSYPLSERDR 320
           D ++A++ L+    L  ++ 
Sbjct: 122 DIEEAKRQLDLPEHLKVKED 141


>gi|242037125|ref|XP_002465957.1| hypothetical protein SORBIDRAFT_01g048850 [Sorghum bicolor]
 gi|241919811|gb|EER92955.1| hypothetical protein SORBIDRAFT_01g048850 [Sorghum bicolor]
          Length = 396

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 72/194 (37%), Gaps = 17/194 (8%)

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA-----AHLLG-----YRFT 191
             G+  G H + +  +     +  S+  +  +L +              +        + 
Sbjct: 180 AAGKAAGMHVIAVPSVPKKTVEFSSADEVIDSLLELRPEKWGLPPFNDWIEGTLPIEPWF 239

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGR 246
           I   VI G   G   LG PTAN+       +      GVY        +  Y  V + G 
Sbjct: 240 IGGPVIKGFGRGSKVLGIPTANLPAENFADVVSEHTSGVYFGWAGLSTRGIYKMVMSIGW 299

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP    N    +E ++  +F ++ YG+   ++   Y+RPE  F  +E L   + ED K A
Sbjct: 300 NPYF-DNTEKTVEPWLLHNFGEDFYGEELRLAIVGYIRPEANFPSLESLIERIHEDGKIA 358

Query: 306 RKILESSYPLSERD 319
            K L+       +D
Sbjct: 359 EKALDLPIYARYKD 372


>gi|326499910|dbj|BAJ90790.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 372

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 30/228 (13%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           G+VA+G FD +H+GH  +   A+  + +    +LSF      ++        ++    + 
Sbjct: 105 GIVALGKFDALHIGHREL---AMHASKSGNPFLLSFVGM-AEVLGWEYRPPIVAHCDRK- 159

Query: 80  KILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++L         ++  ++ +E +     +  QF++K+  + L +K V+ G  +RFG   +
Sbjct: 160 RVLSSWAPYCRNVVPLEYQVEFSKVRYLTPRQFVEKLSTD-LRIKGVVAGENYRFGYKAS 218

Query: 135 GDRGILQKRGEKYGFHTVFIDELRN---------------NKSQIVSSSNIRTALTKGHV 179
           GD   L K  E++G     +  + +               +    VSSS +R AL+ G +
Sbjct: 219 GDAAELVKLCEEFGLSAFIVRSVMDTAKGSYNGATPAVNSSDKGQVSSSRVRQALSVGDI 278

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVY 226
              + LLG +  +   V       R  +  P + M   P     +G Y
Sbjct: 279 EYVSKLLGRKHRLVLTVSECSIKERKNIIIPKSCMVNMP---PADGFY 323


>gi|73946766|ref|XP_541275.2| PREDICTED: similar to riboflavin kinase [Canis familiaris]
          Length = 589

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 439 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMVVS 498

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 499 IGWNP-YYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 557

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K L+    L  ++ 
Sbjct: 558 EEAKKRLDLPEHLKFKED 575


>gi|326513002|dbj|BAK03408.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 372

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 30/228 (13%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           G+VA+G FD +H+GH  +   A+  + +    +LSF      ++        ++    + 
Sbjct: 105 GIVALGKFDALHIGHREL---AMHASKSGNPFLLSFVGM-AEVLGWEYRPPIVAHCDRK- 159

Query: 80  KILEKMG--FSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
           ++L         ++  ++ +E +     +  QF++K+  + L +K V+ G  +RFG   +
Sbjct: 160 RVLSSWAPYCRNVVPLEYQVEFSKVRYLTPRQFVEKLSTD-LRIKGVVAGENYRFGYKAS 218

Query: 135 GDRGILQKRGEKYGFHTVFIDELRN---------------NKSQIVSSSNIRTALTKGHV 179
           GD   L K  E++G     +  + +               +    VSSS +R AL+ G +
Sbjct: 219 GDAAELVKLCEEFGLSAFIVRSVMDTAKGSYNGATPAVNSSDKGQVSSSRVRQALSVGDI 278

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVY 226
              + LLG +  +   V       R  +  P + M   P     +G Y
Sbjct: 279 EYVSKLLGRKHRLVLTVSECSIKERKNIIIPKSCMVNMP---PADGFY 323


>gi|126334727|ref|XP_001372394.1| PREDICTED: similar to RFK protein [Monodelphis domestica]
          Length = 250

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 11/139 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGV 241
            +     V+ G   G   LG PTAN        L  D+    G+Y       + + +  V
Sbjct: 100 PYFCRGKVVRGFGRGSKQLGIPTANFPEQVVDNLPNDLSP--GIYYGWASVGNGSVHKMV 157

Query: 242 ANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N    +E+ I   F ++ YG+  ++    Y+RPE  F  I+ L   + +
Sbjct: 158 LSIGWNP-YYRNLKKSVETHIIHTFKEDFYGEILSIVITGYIRPEKNFSSIDALISAIQD 216

Query: 301 DEKKARKILESSYPLSERD 319
           D ++A+K L+    L  ++
Sbjct: 217 DIEEAKKQLDLPEHLKLKE 235


>gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa]
 gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa]
          Length = 381

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVAN 243
            + I   V+ G   G   LG PTAN+       L      GVY        Q  Y  V +
Sbjct: 237 PWHIGGPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSSQGLYKMVMS 296

Query: 244 FGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E ++  +F  + YG+   +    Y+RPE  F  +E L   + ED 
Sbjct: 297 IGWNPYFN-NTEKTIEPWLLHEFDGDFYGEELRLVVVGYIRPEANFSSLESLIAKIHEDR 355

Query: 303 KKARKILESSYPLSERDR 320
           + A + L+       RD 
Sbjct: 356 RIAERALDIPTYSKYRDD 373


>gi|291236232|ref|XP_002738044.1| PREDICTED: MGC86418 protein-like [Saccoglossus kowalevskii]
          Length = 155

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 11/142 (7%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSY 238
           +         VI G   G   LG PTAN     D++      +  GVY    +      +
Sbjct: 3   MPLPVFCSGTVIKGFGRGSKQLGIPTAN--YPEDVVARLPTDIPTGVYYGWAKVNSGKVH 60

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             V + G NP    N    +E+ I  +F ++ YG   ++    ++R E  F  +++L   
Sbjct: 61  KMVMSVGWNP-FYKNEKKSMETHILHEFEKDFYGSNLSLIMVGFVREERNFNSLDELISA 119

Query: 298 MGEDEKKARKILESSYPLSERD 319
           +  D K+A   LE       +D
Sbjct: 120 IHADIKEAETQLELPENNQYKD 141


>gi|291383401|ref|XP_002708289.1| PREDICTED: Riboflavin kinase-like [Oryctolagus cuniculus]
          Length = 366

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 216 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDSLPADFSTGIYYGWASVGSGDVHKMVVS 275

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 276 IGWNP-YYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 334

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K L+    L  ++ 
Sbjct: 335 EEAKKRLDLPEHLKLKED 352


>gi|291320156|ref|YP_003515417.1| riboflavin biosynthesis protein [Mycoplasma agalactiae]
 gi|290752488|emb|CBH40460.1| Riboflavin biosynthesis protein [Mycoplasma agalactiae]
          Length = 295

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 116/307 (37%), Gaps = 62/307 (20%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG F+  HLGH+ + E+A +I  N    I ++ F          +  IF  +    + + 
Sbjct: 21  IGVFESFHLGHNFLYEKAKEIKGNSNRDIVIVFFKDVENMFKNKNGYIF--TDFENRIQE 78

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
              +GF+  I  +F  +     A  F++K+      +  V+ G  FRFG +  G+   ++
Sbjct: 79  FANLGFAQGIYLEF-EKLWALEANLFLEKLFKNQDGLIDVVVGKDFRFGLNAKGNLDTIK 137

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +   +   +   +D ++  ++  VS++ +++ +  G +     L  Y ++  +++   + 
Sbjct: 138 ETIGEQ--NVHSVDIVKIGENIKVSTTFLKSCIEIGDIELVNSLNLYTYSFSANITINDN 195

Query: 202 IGRTLGFPTANMQLSPDILL-KEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
                     N+    +++  K+G+Y       + T Y+                     
Sbjct: 196 TKL------INLTTDSNVIPLKDGIYLSYVEINEMTYYA--------------------- 228

Query: 261 FIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG------------------EDE 302
            +   + + Y     + F D+   E+K  ++  LK  +                    D 
Sbjct: 229 -VLKANIDNY----EIKFLDF---ELK-DNVASLKSRIKILKSLRFISSLEDDMILNSDI 279

Query: 303 KKARKIL 309
             A+KIL
Sbjct: 280 VNAKKIL 286


>gi|308806888|ref|XP_003080755.1| riboflavin biosynthesis protein-related (ISS) [Ostreococcus tauri]
 gi|116059216|emb|CAL54923.1| riboflavin biosynthesis protein-related (ISS) [Ostreococcus tauri]
          Length = 606

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 25/243 (10%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
             +++ +  +   V +G FD +H GH      A   A    + ++SF     T+      
Sbjct: 310 FFRAIGSGDRPTAVCLGKFDAMHRGH---FALAEAAAARGEVVLVSFAGMAETL--GWES 364

Query: 69  IFTLSPPSIQEKIL----EKMGFSALIRYKFT-LETANYSAEQFIQKVLVEWLEVKTVIT 123
              ++ PS + ++L    EKMG + +  +     +    S + F++ +    + V  V+ 
Sbjct: 365 RLPITAPSDRTRVLRKWSEKMGGTPVREHSMAFKDVRELSPDAFVEMLA--RMGVGAVVA 422

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK------SQIVSSSNIRTALTKG 177
           G  ++FG    GD   L++ GE  G     +D +  N          VSSS +R AL  G
Sbjct: 423 GENYKFGYKAVGDSAALKQFGEANGMTVDVVDLVPANTRSRLGLGDQVSSSRVRRALLDG 482

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN-------MQLSPDILLKEGVYAIRF 230
           ++ +   LL     +  DV             +A+       +  + +    +G Y  R 
Sbjct: 483 NIEDVNWLLEREHRLVLDVQGERMQNALRAAASADSDDVLISLDAAENQPPNDGAYTARV 542

Query: 231 RTQ 233
              
Sbjct: 543 TID 545


>gi|18420664|ref|NP_568429.1| riboflavin biosynthesis protein-related [Arabidopsis thaliana]
 gi|10177822|dbj|BAB11188.1| unnamed protein product [Arabidopsis thaliana]
 gi|197258078|gb|ACH56223.1| RibF1 [Arabidopsis thaliana]
 gi|332005769|gb|AED93152.1| riboflavin biosynthesis protein-like protein [Arabidopsis thaliana]
          Length = 354

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 40/250 (16%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP 68
           + + GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +    
Sbjct: 80  SPVAGGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRK 139

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGT 125
               S  S         G   +   +F +E A+    + +QF++K+  E L V  V+ G 
Sbjct: 140 RVLSSWASY-------CG--NIAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGE 189

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ---------------IVSSSNI 170
            +RFG   +GD   L +  + +G     I+ + +                    VSS+ +
Sbjct: 190 NYRFGYRASGDASELVRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRV 249

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR--TLGFPTANMQLSPDILLKEGVY-A 227
           R AL  G V     LLG    + S     +   +   +   T+++    ++    GVY A
Sbjct: 250 RHALAAGDVRYVTELLGRPHRVISRTRTQDLTSKRGRISLQTSSLL---NLPPGNGVYKA 306

Query: 228 IRFRTQDQTS 237
                 D+  
Sbjct: 307 CSLIVGDKHP 316


>gi|313665226|ref|YP_004047097.1| riboflavin kinase [Mycoplasma leachii PG50]
 gi|312949280|gb|ADR23876.1| riboflavin kinase [Mycoplasma leachii PG50]
          Length = 184

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPR 60
           ++ N   N+    ++K  ++ IGNFDG H+ H  I+ + I+IA    +T  V+SF+    
Sbjct: 2   IYINKPFNKLEKLNIKKSIITIGNFDGFHIYHQKIINKVIQIAKQENLTSIVMSFD---- 57

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKM-----GFSALIRYKFTLETANYSAEQFIQKVLVEW 115
              +      T +  + +++ L+ +             K        + +QFI  VL+  
Sbjct: 58  ---KKIKDNITYTNLATKKQKLDFINNNLSDLDYFFDIKVDDSLIKTTKDQFID-VLINK 113

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L V  ++ G  F+FG    G+   L K   K       I   R+N    +SS+ I+  L 
Sbjct: 114 LNVIKIVEGQDFKFGYLSQGNIDDLIKAFSKKN----VIIFKRDND---ISSTKIKKLLD 166

Query: 176 KGHVLNAAHLLG 187
           +  V  A  LLG
Sbjct: 167 ENLVDKAQELLG 178


>gi|156403131|ref|XP_001639943.1| predicted protein [Nematostella vectensis]
 gi|156227074|gb|EDO47880.1| predicted protein [Nematostella vectensis]
          Length = 171

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTAN----MQLSPDILLKEGVYAIRFRTQD 234
             A         I  +V+ G   G   LG PTAN    +       L  G+Y       +
Sbjct: 5   TEANK----PLFIRGEVVKGFGRGSKELGIPTANYPEELVDQFGSSLGTGIYCGWASVDN 60

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              Y  V + G NP    N    +E+ I  DF Q+ YG   +V   +YLRPE  +  +E 
Sbjct: 61  GPVYKMVMSVGWNP-YYKNEKKSMETHIIHDFDQDFYGAELSVIVLNYLRPEKSYPSLES 119

Query: 294 LKIYMGEDEKKARKILESSYP 314
           L   + +D + A+K L+ +  
Sbjct: 120 LIEAIHQDIENAKKTLDQAEN 140


>gi|118104096|ref|XP_424842.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 161

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 182 AAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDIL------LKEGVYAIRFRTQD 234
           AA +    +    +V+ G     R LG PTAN   S  ++      +  G+Y       +
Sbjct: 6   AAAVRYLPYFCRGEVVKGFGRGSRELGVPTAN--FSEQVVESFPSDIPTGIYYGWASVGN 63

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              +  V + G NP    N    +E+ I + F ++ YG+  ++    Y+R E  F  +E 
Sbjct: 64  GDVHKMVLSIGWNP-FYKNIKKSVETHIINTFKEDFYGEILSIVITGYIRSEKNFNSLET 122

Query: 294 LKIYMGEDEKKARKILESSYPLSERDRII 322
           L   + ED ++A++ L+    L  +D   
Sbjct: 123 LVSAIREDIEEAKRQLDLPEHLKLKDNFF 151


>gi|3080391|emb|CAA18711.1| putative protein [Arabidopsis thaliana]
 gi|7268944|emb|CAB81254.1| putative protein [Arabidopsis thaliana]
          Length = 282

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 183 AHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTS 237
             L    + I   VI G   G   LG PTAN+         +    GVY        +  
Sbjct: 135 NTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGV 194

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           +  V + G NP    N    +E ++  DF+++ YG+   +    Y+RPE  F  +E L  
Sbjct: 195 FKMVMSIGWNPYFN-NKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIA 253

Query: 297 YMGEDEKKARKILE 310
            + ED + A K L+
Sbjct: 254 KIHEDREVAEKALD 267


>gi|62078945|ref|NP_001014128.1| riboflavin kinase [Rattus norvegicus]
 gi|62667123|ref|XP_577001.1| PREDICTED: similar to riboflavin kinase isoform 2 [Rattus
           norvegicus]
 gi|50927358|gb|AAH79125.1| Riboflavin kinase [Rattus norvegicus]
 gi|149062554|gb|EDM12977.1| rCG48018 [Rattus norvegicus]
          Length = 155

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    F     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 61  MVVSIGWNP-YYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A+K L+    L  +D 
Sbjct: 120 QGDIEEAKKQLDLPEHLKLKDD 141


>gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula]
          Length = 377

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 69/192 (35%), Gaps = 17/192 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA----------AHLLGYRFTIES 194
           +      V +  L        ++  +  +L    +               L    + I  
Sbjct: 181 KAAEMEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGG 240

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       L      GVY        +  +  V + G NP 
Sbjct: 241 PVIKGFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSIGWNPY 300

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F+++ YG+   +    Y+RPE+ F  +E L   + ED + A   
Sbjct: 301 FN-NKEKTIEPWLLHEFTEDFYGEELKLVIVGYIRPEVNFPTLESLIAKIHEDRRVAESA 359

Query: 309 LESSYPLSERDR 320
           LE     S +D 
Sbjct: 360 LELPMYSSHKDD 371


>gi|87240728|gb|ABD32586.1| Riboflavin kinase / FAD synthetase [Medicago truncatula]
          Length = 237

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 69/192 (35%), Gaps = 17/192 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA----------AHLLGYRFTIES 194
           +      V +  L        ++  +  +L    +               L    + I  
Sbjct: 41  KAAEMEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGG 100

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       L      GVY        +  +  V + G NP 
Sbjct: 101 PVIKGFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSIGWNPY 160

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F+++ YG+   +    Y+RPE+ F  +E L   + ED + A   
Sbjct: 161 FN-NKEKTIEPWLLHEFTEDFYGEELKLVIVGYIRPEVNFPTLESLIAKIHEDRRVAESA 219

Query: 309 LESSYPLSERDR 320
           LE     S +D 
Sbjct: 220 LELPMYSSHKDD 231


>gi|21553715|gb|AAM62808.1| unknown [Arabidopsis thaliana]
          Length = 354

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 40/250 (16%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSP 68
           + + GG+VA+G FD +H+GH  +  QA +I     ++      VL + P    + +    
Sbjct: 80  SPVAGGIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRK 139

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGT 125
               S  S         G  ++   +F +E A+    + +QF++K+  E L V  V+ G 
Sbjct: 140 RVLSSWASY-------CG--SIAPVEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGE 189

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ---------------IVSSSNI 170
            +RFG   +GD   L +  + +G     I+ + +                    VSS+ +
Sbjct: 190 NYRFGYRASGDASELVRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRV 249

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR--TLGFPTANMQLSPDILLKEGVY-A 227
           R AL  G V     LLG    + S     +   +   +   T+++    ++    GVY A
Sbjct: 250 RHALAAGDVRYVTELLGRPHRVISRTRTQDITSKRGRISLQTSSLL---NLPPGNGVYKA 306

Query: 228 IRFRTQDQTS 237
                 D+  
Sbjct: 307 CSLIVGDKHP 316


>gi|14149726|ref|NP_062310.1| riboflavin kinase [Mus musculus]
 gi|37537952|sp|Q8CFV9|RIFK_MOUSE RecName: Full=Riboflavin kinase; AltName: Full=ATP:riboflavin
           5'-phosphotransferase; AltName: Full=Flavokinase;
           AltName: Full=KOI-4
 gi|12833060|dbj|BAB22372.1| unnamed protein product [Mus musculus]
 gi|12842488|dbj|BAB25622.1| unnamed protein product [Mus musculus]
 gi|12846170|dbj|BAB27057.1| unnamed protein product [Mus musculus]
 gi|37572284|gb|AAH51021.1| Riboflavin kinase [Mus musculus]
 gi|127796553|gb|AAH33521.2| Riboflavin kinase [Mus musculus]
 gi|148709608|gb|EDL41554.1| riboflavin kinase, isoform CRA_b [Mus musculus]
          Length = 155

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    F     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 61  MVVSIGWNP-YYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A+K L+    L  +D 
Sbjct: 120 QGDIEEAKKQLDLPEHLKLKDD 141


>gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa]
 gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa]
          Length = 382

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 68/192 (35%), Gaps = 17/192 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFTIES 194
           +      V +  +       +++  + ++L                    L    + I  
Sbjct: 184 KAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDDWIDGTLPLEIWHIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+ G   G   LG PTAN+       L      GVY        +  Y  V + G NP 
Sbjct: 244 PVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F  + YG+   +    Y+RPE  F  +E L   + ED + A + 
Sbjct: 304 FN-NTEKTIEPWLLHEFDGDFYGEELRLVIVGYIRPEANFTTLESLIAKIHEDRRIAERA 362

Query: 309 LESSYPLSERDR 320
           L+    L  +D 
Sbjct: 363 LDIPLYLKYKDD 374


>gi|148906859|gb|ABR16575.1| unknown [Picea sitchensis]
          Length = 362

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 110/286 (38%), Gaps = 34/286 (11%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           GG+VA+G FD +H+GH  +  +A KI       +LSF      ++     +  ++    +
Sbjct: 79  GGIVALGKFDALHVGHRELAIRAAKI---GVPFLLSFVGI-AEVLGLEKRLPVVAKCDRK 134

Query: 79  EKI-LEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + L       ++ +++ ++ A+    S  QF++K+  E L VK V+ G  +RFG    
Sbjct: 135 RVLSLWAPLCDGVVPHEYHVQFAHVRYLSPRQFVEKLSKE-LGVKGVVAGANYRFGYKAL 193

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNN----------------KSQIVSSSNIRTALTKGH 178
           GD   L +   +YG     +D + +                 +   VSS+ +R AL  G+
Sbjct: 194 GDASDLVQLCGEYGLKAYIVDSVMDKFDGSSLEQENTGTDLREKGQVSSTLVRKALAAGN 253

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +     LLG +  +   +     I     F +    +      +EG Y      ++    
Sbjct: 254 IKRVEQLLGRKHRL--MLTTDNCIVTKNIFVSCRSSVLNQ-PPREGQYGCMIMIKENDDV 310

Query: 239 SGVAN-----FGRNPTMVPNGPLLLESFIFDFSQEIYGQ-RCTVSF 278
              +N      G     + +  + +      F   + G+    + F
Sbjct: 311 DRNSNGNENIIGYGDLKINSTQIEVTLHEGSFGAHLNGKSFIDLEF 356


>gi|300123858|emb|CBK25129.2| Riboflavin kinase [Blastocystis hominis]
          Length = 152

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 190 FTIESDVIHGEKIGRTLG-FPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVANF 244
             IE  V+HG K G TL   PTAN+        +K+   GVY         T Y  VAN 
Sbjct: 13  CRIEGTVVHGFKRGSTLLDCPTANICTDHIQDAIKDFKKGVYYGWASLHG-TVYKMVANI 71

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G+NP+   N  + +E  +  +FSQ+ Y +   V     +R E KF  +++LK  + ED  
Sbjct: 72  GKNPSF-GNEHVSVEVHLLHEFSQDFYDENLKVVILGSIRTESKFSSLDELKTAIHEDCG 130

Query: 304 KARKILESS 312
            A K+L+  
Sbjct: 131 IADKLLDDQ 139


>gi|168020472|ref|XP_001762767.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686175|gb|EDQ72566.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 147

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANM---QLSPDIL-LKEGVYA----IRFRTQDQTSY 238
           +     + V+HG   G   +G PTAN+   +L  +IL L +GVY     ++    D    
Sbjct: 3   FPLYASAKVVHGFGRGSKQMGIPTANLNPEELPKEILDLPKGVYFGWVQVKGEGLDAGVQ 62

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
             V N G  PT   +     E  I  D+  + YGQ   ++   ++RPE+KF  ++ L   
Sbjct: 63  KMVMNVGNRPTFADSDA---EVHILHDYKIDFYGQDVGIAVLGFIRPEMKFSSLDALVER 119

Query: 298 MGEDEKKARKILESSYPLS-ERDRII 322
           +G+D K A   LE     S + DR  
Sbjct: 120 IGDDIKAATLYLEEEVLKSYQTDRFF 145


>gi|18845101|gb|AAL79554.1|AF482734_1 riboflavin kinase [synthetic construct]
 gi|7023634|dbj|BAA92033.1| unnamed protein product [Homo sapiens]
          Length = 162

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+  +V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILSVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKRLELPEHLKIKED 148


>gi|289808237|ref|ZP_06538866.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 103

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L V+ +  G  FRFG  RAGD  +LQK G +YGF               +SS+ +R AL
Sbjct: 1   RLGVQFLAVGDDFRFGASRAGDFLLLQKAGAEYGFAVSSTQTFCE-GGVRISSTAVRQAL 59

Query: 175 TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPD 218
            + ++  A  LLG+ FTI   V+HG+++GRT+GFPTAN+ L   
Sbjct: 60  AEDNLALAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQ 103


>gi|331703346|ref|YP_004400033.1| riboflavin kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801901|emb|CBW54054.1| Riboflavin kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 184

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 16/176 (9%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           + K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+      I+++     L+
Sbjct: 15  NTKKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFDKK----IKNNKTYTNLA 70

Query: 74  PPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
               + + +  +       I  K        + +QFI  +L+  L V  ++ G  F FG 
Sbjct: 71  TKKQKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLNKLNVIKIVEGQDFTFGY 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
              G+   L +   K       I   R+N    +SS+ I+  L +  V  A  LLG
Sbjct: 130 LSQGNINDLIRVFSKEN----VIIFKRDND---ISSTKIKKLLDENLVDKAQELLG 178


>gi|297684611|ref|XP_002819922.1| PREDICTED: riboflavin kinase-like [Pongo abelii]
          Length = 162

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKRLELPEHLKVKED 148


>gi|189055105|dbj|BAG38089.1| unnamed protein product [Homo sapiens]
          Length = 162

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKRLELPEHLKIKED 148


>gi|256383932|gb|ACU78502.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384764|gb|ACU79333.1| riboflavin kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455432|gb|ADH21667.1| riboflavin kinase (Flavokinase) [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 184

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 16/176 (9%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           + K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+      I+++     L+
Sbjct: 15  NTKKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFDKK----IKNNKTHTNLA 70

Query: 74  PPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
               + + +  +       I  K        + +QFI  +L+  L V  ++ G  F FG 
Sbjct: 71  TKKQKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLNKLNVIKIVEGQDFTFGY 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
              G+   L +   K       I   R+N    +SS+ I+  L +  V  A  LLG
Sbjct: 130 LSQGNINDLIRVFSKEN----VIIFKRDND---ISSTKIKKLLDENLVDKAQELLG 178


>gi|332236580|ref|XP_003267478.1| PREDICTED: riboflavin kinase-like [Nomascus leucogenys]
          Length = 162

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKQLELPEHLKIKED 148


>gi|67469859|ref|XP_650901.1| Riboflavin kinase / FAD synthetase [Entamoeba histolytica
           HM-1:IMSS]
 gi|56467567|gb|EAL45515.1| Riboflavin kinase / FAD synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 131

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           TI+ +V+ G + GRT+G+PTAN+  +P I L++GVY  + +      Y    + G+NPT 
Sbjct: 4   TIKGNVVKGFQRGRTIGYPTANI--NPTIELEQGVYYGQVKLMG-KVYHAAISVGKNPTF 60

Query: 251 VPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                +++E  IF+ F  E YG+   V    +LR   K   I++LK  +  D       +
Sbjct: 61  CL-KNIVVEVHIFEQFKDEFYGEEIEVKIMKFLRGMKKVNGIDELKKMISNDCNIIENEI 119

Query: 310 ESSYPL 315
             + PL
Sbjct: 120 IPNTPL 125


>gi|47226414|emb|CAG08430.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 145

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN   S  + L  +   G+Y       +   + 
Sbjct: 1   MKSLPYFCRGEVVRGFGRGSKELGIPTANFPDSVVENLPADIGTGIYYGWASLGNGDVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +   F ++ YG+  +V    Y+RPE  F  ++ L   +
Sbjct: 61  MVMSIGWNP-YYKNTKKSMETHVIHTFKEDFYGELLSVVMVGYIRPERSFDSLDALVTAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
            +D ++A   L+    L  ++ 
Sbjct: 120 NDDIEEANTKLDHPEHLKLKED 141


>gi|308492850|ref|XP_003108615.1| hypothetical protein CRE_10924 [Caenorhabditis remanei]
 gi|308248355|gb|EFO92307.1| hypothetical protein CRE_10924 [Caenorhabditis remanei]
          Length = 160

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 8/130 (6%)

Query: 184 HLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEG----VYAIRFRTQDQTSY 238
            +    +  E +V+ G   G   LG PTANM  +    L +G    VY  +   +  T Y
Sbjct: 25  RMQILPYHFEGEVVRGFGRGGKELGCPTANMDDTVIENLPDGLKVGVYYGKATFKGNT-Y 83

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           S   + G NP    N    +E  + D+   + YG+R +     Y+R    F  +E+LK  
Sbjct: 84  SMAMSVGWNPQYH-NEKKTVEVHLIDYAGGDFYGKRLSAVIVGYIRDMRSFASLEELKTA 142

Query: 298 MGEDEKKARK 307
           + +D + AR+
Sbjct: 143 IAKDIEIARR 152


>gi|159108684|ref|XP_001704611.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia ATCC
           50803]
 gi|157432679|gb|EDO76937.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia ATCC
           50803]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGR 246
             F  +  V+ G + GR + F TAN+ LS    L++GV++   R +        V ++G+
Sbjct: 1   MIFCTKGTVVRGFQRGRVINFKTANLVLSNQDQLEDGVFSGWARVELSGDVLPAVISYGK 60

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NPT   N    LE  I   F ++ YG     +    LR  IKF  IE+L   +  D + A
Sbjct: 61  NPTFA-NKSKTLEVHILATFPEDFYGATLYTTIQRRLRSPIKFSGIEELNAQIKMDIENA 119

Query: 306 R 306
           +
Sbjct: 120 Q 120


>gi|325188197|emb|CCA22738.1| riboflavin kinase putative [Albugo laibachii Nc14]
          Length = 153

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 196 VIHGEKIGRTLGFPTANMQLSP--DIL--LKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
           V    + G+ LG PTAN+      + L  L  G+Y           Y  VA+ G NP   
Sbjct: 18  VEGFGRGGKQLGCPTANLSREDLGEKLEQLSTGIYCGWATVNGHGPYKAVASIGWNPYF- 76

Query: 252 PNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            N    +E  +   F ++ YG    +    YLRPE+ F  +E L   +  D K++   L+
Sbjct: 77  KNEVKTVEPHLLHHFEEDFYGATLKLLICGYLRPEMNFPSLESLITAIQNDIKQSEVWLD 136

Query: 311 SSY 313
            + 
Sbjct: 137 QTQ 139


>gi|33303811|gb|AAQ02419.1| hypothetical protein FLJ11149 [synthetic construct]
          Length = 163

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKRLELPEHLKIKED 148


>gi|13937920|gb|AAH07069.1| Riboflavin kinase [Homo sapiens]
 gi|119582982|gb|EAW62578.1| riboflavin kinase, isoform CRA_a [Homo sapiens]
 gi|119582983|gb|EAW62579.1| riboflavin kinase, isoform CRA_a [Homo sapiens]
          Length = 162

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 12  PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 71

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 72  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 130

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 131 EEAKKRLELPEHLKIKED 148


>gi|308162096|gb|EFO64516.1| Riboflavin kinase, FMN adenylyltransferase [Giardia lamblia P15]
          Length = 138

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGR 246
             F  +  V+ G + GR + F TAN+ LS    L++GV++   R + +      V ++G+
Sbjct: 1   MIFCTKGTVVRGFQRGRVINFKTANLVLSNQDQLEDGVFSGWARVELNGDVLPAVISYGK 60

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NPT   N    LE  I   F ++ YG     +    LR  +KF  IE+L   +  D + A
Sbjct: 61  NPTFA-NKNKTLEVHILATFPEDFYGATLYTTIQRRLRSPVKFSGIEELNAQIKMDIENA 119

Query: 306 R 306
           +
Sbjct: 120 Q 120


>gi|319639915|ref|ZP_07994643.1| hypothetical protein HMPREF9011_00240 [Bacteroides sp. 3_1_40A]
 gi|317388454|gb|EFV69305.1| hypothetical protein HMPREF9011_00240 [Bacteroides sp. 3_1_40A]
          Length = 84

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 40/74 (54%)

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
             ++G+ N G  PT+     L +E  I +FS+ IY +   + F  YLRPE K+  I+ L 
Sbjct: 10  KKWAGMLNIGHRPTINNGNNLSIEVNILNFSENIYHKEMRIEFVKYLRPEEKYDTIDALI 69

Query: 296 IYMGEDEKKARKIL 309
             M +D +K  KIL
Sbjct: 70  AQMHKDREKTAKIL 83


>gi|42560884|ref|NP_975335.1| riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492381|emb|CAE76977.1| Riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301321035|gb|ADK69678.1| riboflavin kinase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 184

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 16/176 (9%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLS 73
           + K  ++ IGNFDG H+ H  I+ Q I IA    +T  V+SF+      I+++     L+
Sbjct: 15  NTKKAIITIGNFDGFHIFHQKIINQVINIAKQENLTSIVMSFDKK----IKNNKTYTNLA 70

Query: 74  PPSIQEKIL--EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
               + + +  +       I  K        + +QFI  +L+  L V  ++ G  F FG 
Sbjct: 71  TKKQKLEFINTKLTDLDYFIDIKVDDSLIKTTKDQFID-ILLSKLNVIKIVEGQDFTFGY 129

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
              G+   L +   K       I   R+N    +SS+ I+  L +  V  A  LLG
Sbjct: 130 LSQGNINDLIRVFSKEN----VIIFKRDND---ISSTKIKKLLDENLVDKAQELLG 178


>gi|269973877|ref|NP_060809.3| riboflavin kinase [Homo sapiens]
 gi|209572667|sp|Q969G6|RIFK_HUMAN RecName: Full=Riboflavin kinase; AltName: Full=ATP:riboflavin
           5'-phosphotransferase; AltName: Full=Flavokinase
 gi|57209232|emb|CAI40676.1| riboflavin kinase [Homo sapiens]
          Length = 155

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 5   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 65  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 123

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 124 EEAKKRLELPEHLKIKED 141


>gi|313678669|ref|YP_004056409.1| riboflavin kinase-like protein [Mycoplasma bovis PG45]
 gi|312950646|gb|ADR25241.1| riboflavin kinase-like protein [Mycoplasma bovis PG45]
          Length = 295

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 60/292 (20%), Positives = 113/292 (38%), Gaps = 32/292 (10%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           IG F+  HLGH+ + E+A +I  N    I ++ F             IF  +    + + 
Sbjct: 21  IGVFESFHLGHNFLYEKAKEIKKNSARDIVIVFFKDVEHMFKNKDGYIF--TNFENRIQE 78

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
              +GF+  I  +F  +     A+ F++K+L    E   V+ G  FRFG +  G+   + 
Sbjct: 79  FANLGFTNGIYLEF-EKLWALDADSFLKKLLKNQDESIDVVVGKDFRFGLNAKGNIDTIM 137

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
                       +D ++   +  VS++ +++ +  G +     L  Y ++  + +   + 
Sbjct: 138 NFVGAE--RVHPVDIVKIGDNIKVSTTFLKSCIEIGDIELVNSLNLYIYSFSAQINADDN 195

Query: 202 IGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV-ANFGRNPTMVPNGPLLLES 260
             +      +N+     + LK+G+Y       + T Y+ + AN              LE 
Sbjct: 196 ENKVNLVTDSNI-----VPLKDGIYLCYIEINEMTYYAVLKANIDN-----------LEV 239

Query: 261 FIFDFSQEIYGQRCTVSFFDYLR--PEIKF-KDIEKLKIYMGEDEKKARKIL 309
              DF      +         +R    ++F   I      + ED  KA+KIL
Sbjct: 240 KFLDFEL----KSGVTDLKSRIRVLKSLRFISSIADDIF-LDEDIIKAKKIL 286


>gi|242018566|ref|XP_002429745.1| Riboflavin kinase, putative [Pediculus humanus corporis]
 gi|212514757|gb|EEB17007.1| Riboflavin kinase, putative [Pediculus humanus corporis]
          Length = 152

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQ-LSPDILLKE---GVYAIRFRTQDQTSYS 239
                +     VI G   G   LG PTAN+   + + L  E   GVY    + ++   Y 
Sbjct: 3   YSCLPYYARDVVIKGFGRGSKELGVPTANLPSQTVNKLPPELDTGVYFGWAKVENSPVYK 62

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E  I   F  + YG   +V+   ++RPE+ F ++E L   +
Sbjct: 63  MVMSIGWNP-FYKNKEKSMEIHILHLFENDFYGCMLSVAIVGFIRPEMDFDNVESLIETI 121

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D + A K L+    +  ++ 
Sbjct: 122 RNDIEIAEKELDKPNFIQYKNN 143


>gi|226491025|ref|NP_001146905.1| haloacid dehalogenase-like hydrolase domain-containing protein 1A
           [Zea mays]
 gi|195604978|gb|ACG24319.1| haloacid dehalogenase-like hydrolase domain-containing protein 1A
           [Zea mays]
          Length = 398

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 17/191 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA-----AHLLG-----YRFTIES 194
           +    H + +  +    ++  S+  +  +L                +        + I  
Sbjct: 184 KAAEMHVIAVPSIPKKTAEFSSADEVINSLLDVRPEKWGLPPFNDWIEGTLPIEPWFIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGRNPT 249
            VI G   G   LG PTAN+       +      GVY        +  Y  V + G NP 
Sbjct: 244 PVIKGFGRGSKVLGIPTANLPAENFSDVVSEHTSGVYFGWAGLSTRGIYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  DF ++ YG+   ++   Y+RPE  F  +E L   + ED + A K 
Sbjct: 304 F-DNTEKTVEPWLLHDFGEDFYGEEVRLAIVGYIRPEANFPSLESLIERIHEDGRVAEKA 362

Query: 309 LESSYPLSERD 319
           L+       +D
Sbjct: 363 LDLPMYAKYKD 373


>gi|224090873|ref|XP_002187523.1| PREDICTED: riboflavin kinase [Taeniopygia guttata]
          Length = 155

 Score =  102 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSGV 241
            +    +V+ G   G   LG PTAN   S  ++      +  G+Y       +   +  V
Sbjct: 5   PYFCRGEVVKGYGRGSKELGIPTAN--FSEQVVESFPSDIPTGIYYGWACVGNGDVHKMV 62

Query: 242 ANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N    +E+ I   F ++ YG+  ++    Y+RPE  F  ++ L + + E
Sbjct: 63  LSIGWNP-FYKNIKKSVETHIIHTFKEDFYGEILSIVITGYIRPEKNFDSLDALILAIQE 121

Query: 301 DEKKARKILESSYPLSERDR 320
           D ++A++ L+    L  ++ 
Sbjct: 122 DIEEAKRQLDLPEHLKLKED 141


>gi|224093972|ref|XP_002310055.1| predicted protein [Populus trichocarpa]
 gi|222852958|gb|EEE90505.1| predicted protein [Populus trichocarpa]
          Length = 391

 Score =  102 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 113/291 (38%), Gaps = 43/291 (14%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
             + GG+VA+G FD +H+GH  +   AI+ +     ++LSF      +     P   +  
Sbjct: 109 ASVAGGIVALGKFDALHIGHREL---AIQASKVGAPSLLSFVGMAEIL--GWEPRAPIVA 163

Query: 75  PSIQEKILEKMG------FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              + ++L              ++ +F+    + +  QF++K+  E L V  V+ G  +R
Sbjct: 164 KCDRSRVLSSWAPYCGNLVPEEVQIEFSC-VRHLTPRQFVEKLSKE-LGVIGVVAGENYR 221

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQI-------------VSSSNIRTALT 175
           FG   AGD   L +  +++G     I  + +N                 VSS+ +R AL 
Sbjct: 222 FGYKAAGDASELVRLCKEHGMGAYIISSVMDNNQDYRSMNSNDLKDRGQVSSTRVRQALA 281

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKI-----GRTLGFPTANMQLSPDILLKEGVYAIRF 230
            G +   + LLG    +   +   E+      G  +  P + +    ++  K+G Y    
Sbjct: 282 VGDMKYVSELLGRHHRLILMLKDQEERAKTSSGWRVSAPKSYLL---NLPPKDGFY---- 334

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESFI---FDFSQEIYGQRCTVSF 278
             ++ +   G  N       +    + LE+     FDF  +       + F
Sbjct: 335 --ENCSLLFGNKNPVTCRVFMDTTHIHLETDEADPFDFETDQEPHLLGIEF 383


>gi|301778225|ref|XP_002924531.1| PREDICTED: hypothetical protein LOC100482275 [Ailuropoda
           melanoleuca]
          Length = 311

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 205 TLGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLES 260
            LG PTAN  +   D L  +   G+Y       +   +  V + G NP    N    +E+
Sbjct: 178 QLGIPTANFPEQVVDNLPADVSTGIYYGWASVGNGDVHKMVVSIGWNP-YYKNTKKSMET 236

Query: 261 FIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
            I   F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+    L  ++
Sbjct: 237 HIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQADIEEAKKRLDLPEHLKFKE 296

Query: 320 R 320
            
Sbjct: 297 D 297


>gi|193671562|ref|XP_001950511.1| PREDICTED: putative riboflavin kinase-like [Acyrthosiphon pisum]
          Length = 150

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 7/139 (5%)

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQD 234
             +    G  F     V+ G   G   LG PTAN        L E    GVY    +   
Sbjct: 4   TESTKENGLPFYASGLVVKGFGRGSKDLGIPTANFSRDVIKGLPENISTGVYFGWAQVDK 63

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              Y  V + G NP    N    +E  I   F ++ YG    V    ++RPE+ F  +++
Sbjct: 64  SPVYMMVMSIGWNP-FYQNIEKSMEIHILKQFDEDFYGSNLKVKVVGFIRPELNFNSVDE 122

Query: 294 LKIYMGEDEKKARKILESS 312
           L   +  D + A++ L+ +
Sbjct: 123 LVSTIHSDIEYAKQKLDEN 141


>gi|253747059|gb|EET01951.1| Riboflavin kinase, FMN adenylyltransferase [Giardia intestinalis
           ATCC 50581]
          Length = 138

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANFGR 246
             F  +  VI G + GR + F TAN+ LS    L+EGV++   R + +      V ++GR
Sbjct: 1   MIFCTKGTVIKGFQRGRIINFKTANLLLSDPDQLEEGVFSGWARVESNGDVLPAVISYGR 60

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NPT   N    LE  I   F ++ YG     +    LR  IKF  IE+L   +  D + A
Sbjct: 61  NPTFA-NKDRTLEVHILATFPEDFYGATLYTAIQRRLRSPIKFSGIEELNTQIKIDIEHA 119

Query: 306 R 306
           +
Sbjct: 120 Q 120


>gi|256072934|ref|XP_002572788.1| riboflavin kinase/fmn adenylyltransferase [Schistosoma mansoni]
 gi|238657953|emb|CAZ29020.1| riboflavin kinase/fmn adenylyltransferase, putative [Schistosoma
           mansoni]
          Length = 154

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 7/136 (5%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ--LSPDIL--LKEGVYAIRFRTQDQTSYSG 240
            G  F     V+HG   G   LG PTAN++  +  +I    K G+Y    +  +   Y  
Sbjct: 7   AGALFYASGKVVHGFGRGSKQLGIPTANLEESIVSEIPDSTKNGIYFGWAKLSNTPVYKM 66

Query: 241 VANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           V + G NP    N    +E  I   F +  YG    V    Y RPE  F  IE L   + 
Sbjct: 67  VMSIGWNPYF-KNIKRSVEVHILHRFEENFYGDTIKVIAVKYFRPEYDFPSIEDLIKQIH 125

Query: 300 EDEKKARKILESSYPL 315
            D  +A   L+ S  L
Sbjct: 126 TDISEANLFLDKSEAL 141


>gi|29726587|pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase
 gi|29726597|pdb|1NB9|A Chain A, Crystal Structure Of Riboflavin Kinase
 gi|31615984|pdb|1P4M|A Chain A, Crystal Structure Of Riboflavin Kinase
          Length = 147

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 64  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 122

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 123 EEAKKRLELPEYLKIKED 140


>gi|289742591|gb|ADD20043.1| riboflavin kinase [Glossina morsitans morsitans]
          Length = 165

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 7/140 (5%)

Query: 185 LLGYRFTIESD-VIHGEKIGRTLGFPTANMQLSPDILLK----EGVYAIRFRTQDQTSYS 239
           L    +      V    +    LG PTAN  L     L      G+Y       +   Y 
Sbjct: 2   LNYLPYYASGRIVEGFRRGSSELGVPTANYPLEVVKSLPGCFKTGIYYGWANVDNGPVYK 61

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I  DF+ ++YG         +LRPE  F  +E L   +
Sbjct: 62  MVMSIGWNP-FYNNKEKSMETHILHDFACDLYGSLLKTCIAGFLRPEKDFDSLEDLIRAV 120

Query: 299 GEDEKKARKILESSYPLSER 318
            +D+  A+ +L++    S  
Sbjct: 121 QDDKSLAKDLLDADESKSAL 140


>gi|40889446|pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary
           Product Complex
          Length = 149

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +     V+ G   G   LG PTAN  +   D L  +   G+Y           +  V +
Sbjct: 6   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 65

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D 
Sbjct: 66  IGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDI 124

Query: 303 KKARKILESSYPLSERDR 320
           ++A+K LE    L  ++ 
Sbjct: 125 EEAKKRLELPEYLKIKED 142


>gi|148377494|ref|YP_001256370.1| hypothetical protein MAG_2280 [Mycoplasma agalactiae PG2]
 gi|148291540|emb|CAL58926.1| Riboflavin biosynthesis protein [Mycoplasma agalactiae PG2]
          Length = 295

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 117/305 (38%), Gaps = 58/305 (19%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           IG F+  HLGH+ + E+A +I  NS    V+ F      + ++ +  +  +    + +  
Sbjct: 21  IGVFESFHLGHNFLYEKAKEIKGNSNRDIVIVFFRDIENMFKNKNG-YIFTDFENRIQEF 79

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             +GF+  I  +F  +     A  F++K+      +  V+ G  FRFG +  G+   +++
Sbjct: 80  ANLGFAQGIYLEF-EKLWALEANLFLEKLFKNQDGLIDVVVGKDFRFGLNAKGNLDTIKE 138

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
              +   +   +D ++  ++  VS++ +++ +  G +     L  Y ++  + +   +  
Sbjct: 139 TIGEK--NVHSVDIVKIGENIKVSTTFLKSCIEIGDIELVNSLNLYTYSFSAYITFNDIT 196

Query: 203 GRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
                   +N+     I LK+G+Y       + T Y+                      +
Sbjct: 197 KSIKLTTDSNI-----IPLKDGIYLSYVEINEMTYYA----------------------V 229

Query: 263 FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG------------------EDEKK 304
              + + Y     + F D+   E+K  ++  LK  +                    D   
Sbjct: 230 LKANIDNY----EIKFLDF---ELK-DNVANLKSRIKILKSLRFISSLEDDMILNSDIVN 281

Query: 305 ARKIL 309
           A+KIL
Sbjct: 282 AKKIL 286


>gi|221105666|ref|XP_002163807.1| PREDICTED: similar to MGC86418 protein [Hydra magnipapillata]
          Length = 159

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 183 AHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE-------GVYAIRFRTQD 234
             L    F ++ +V+ G   G   LG PTAN    P+I++K+       GVY    R  +
Sbjct: 10  RRLKTSPFMVQGEVVKGFGRGSKELGIPTANF---PEIVVKDIPSELSAGVYYGWSRVDN 66

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
              Y  V + G NP    N    +E+ I  +F  + YG    +    Y+RPE+ F  + +
Sbjct: 67  GEIYKMVLSIGWNP-FYKNEKKSMETHILHEFDSDFYGSTLRIVMTGYIRPELNFGSLTE 125

Query: 294 LKIYMGEDEKKARKILESSYPLSER 318
           L   +  D   A+  LE S  +S R
Sbjct: 126 LVDAIKNDIAIAQSSLEKSDHISHR 150


>gi|47459303|ref|YP_016165.1| hypothetical protein MMOB4680 [Mycoplasma mobile 163K]
 gi|47458633|gb|AAT27954.1| FAD synthase (riboflavin kinase/biosynthesis protein) [Mycoplasma
           mobile 163K]
          Length = 289

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 109/288 (37%), Gaps = 40/288 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHP 59
           M V    EI+       K  +V  G FD +H+GH  + ++A+    N+ ++++ +    P
Sbjct: 1   MKVIQFPEISSEFITSEKNTIV-FGGFDSMHIGHLELFKKALAENKNAIVSIVQNIENSP 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           +     ++   T+     +  IL  +    ++  K   +  N     FI ++  +  +++
Sbjct: 60  K-----NTDNKTIFSLRNRLDILNAIEIQNVLLIKLDEKLINLEPWDFIDEIT-KKYKIE 113

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            ++ G  ++FGKD   +   L++      F    I  L    +  + +  I   +  G V
Sbjct: 114 KIVVGEDYKFGKDAKWNAKNLKEY-----FPNTIIVPLIKIGNYKIGTKLISEMIKTGEV 168

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYS 239
            +   LL   F+I+ D++          +P         I +  G+YA      +   ++
Sbjct: 169 SDLNSLLIKFFSIDIDLV----SSLEFQYP------KKIIKIHNGIYACLVYINNVIYHA 218

Query: 240 GVANFGRNPTMVPNGPLLLES-FIFDFSQEIYGQ---RCTVSFFDYLR 283
            V              + +E+  I  F    Y +      +SF   +R
Sbjct: 219 TVL-------------IDVENKNIIKFFNYNYEKPQNNIRISFIQEIR 253


>gi|29150370|gb|AAO72379.1| unknow protein [Oryza sativa Japonica Group]
          Length = 345

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 37/231 (16%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIFTLS 73
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q        S
Sbjct: 79  GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 138

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
                           ++  ++ +E +     +  QF++++  + L+++ V+ G  +RFG
Sbjct: 139 WAPY---------CKNVVPIEYQVEFSKVRYLTPRQFVERLSRD-LKIQGVVAGENYRFG 188

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRN--------------NKSQIVSSSNIRTALTK 176
              +GD   L K  E++G     +  + +              +    VSSS +R AL  
Sbjct: 189 YRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAM 248

Query: 177 GHVLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           G +   + LLG +  +   V  +  +  + +  P + M   P     +G+Y
Sbjct: 249 GDMEYVSELLGRKHRLVLTVKENHLQERKRIMLPKSCMLNMP---PADGLY 296


>gi|167394447|ref|XP_001740972.1| riboflavin kinase [Entamoeba dispar SAW760]
 gi|165894674|gb|EDR22583.1| riboflavin kinase, putative [Entamoeba dispar SAW760]
          Length = 131

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRN 247
            + TI+  V+ G + GRT+G+ TAN+  + +  L++GVY  + + +    Y    + G+N
Sbjct: 1   MQITIKGKVVKGFQRGRTIGYRTANINPTNE--LEQGVYYGQVKLRG-KIYHAAISVGKN 57

Query: 248 PTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           PT       ++E  IF+ F  E YG+   V    +LR   K   I++LK  +  D     
Sbjct: 58  PTFCL-KNTVVEVHIFEQFKDEFYGEEIEVKIMKFLRGMKKVNGIDELKKMISNDCNTIE 116

Query: 307 KILESSYPL 315
             +  + PL
Sbjct: 117 NDIIPNTPL 125


>gi|293346161|ref|XP_001079189.2| PREDICTED: riboflavin kinase-like [Rattus norvegicus]
 gi|293357943|ref|XP_230344.5| PREDICTED: riboflavin kinase-like [Rattus norvegicus]
          Length = 155

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 5/141 (3%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    F     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            V + G NP        +    I  F ++ YG+   V+   YLRPE  F  +E L   + 
Sbjct: 61  MVVSIGWNPYYKNVKKSMQTHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQ 120

Query: 300 EDEKKARKILESSYPLSERDR 320
            D ++A+K L+    L  +D 
Sbjct: 121 GDIEEAKKQLDLPEHLKLKDD 141


>gi|83319941|ref|YP_424312.1| riboflavin kinase domain-containing protein [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
 gi|83283827|gb|ABC01759.1| riboflavin kinase (flavokinase) domain protein [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 184

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTIIQSSSPIFTLSPPSI 77
            ++ IGNFDG H+ H  I+ + I+IA    +T  V+SF+       +      T +  + 
Sbjct: 19  AIITIGNFDGFHIYHQKIINKVIQIAKQENLTSIVMSFD-------KKIKDNITYTNLAT 71

Query: 78  QEKILEKM-----GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +++ L+ +             K        + +QFI  VL+  L V  ++ G  F+FG  
Sbjct: 72  KKQKLDFINNNLSDLDYFFDIKVDDSLIKTTKDQFID-VLINKLNVIKIVEGQDFKFGYL 130

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             G+   L K   K       I   R+N    +SS+ I+  L +  V  A  LLG
Sbjct: 131 SQGNIDDLIKAFSKKN----VIIFKRDND---ISSTKIKKLLDENLVDKAQELLG 178


>gi|213512526|ref|NP_001133984.1| Riboflavin kinase [Salmo salar]
 gi|209156058|gb|ACI34261.1| Riboflavin kinase [Salmo salar]
          Length = 162

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN   S  + L  +   G+Y           + 
Sbjct: 1   MKSLPYFSRGEVVRGFGRGSKELGIPTANFPDSVVEHLPGDISTGIYYGWACVGSGDVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +   F ++ YGQ  +V    Y+RPE  +  ++ L   +
Sbjct: 61  MVMSIGWNP-YYKNTKKSMETHVIHTFKEDFYGQILSVVMVGYIRPERSYDSLDALIAAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A++ L+    L  ++ 
Sbjct: 120 NHDIEEAKRNLDLPEHLKLKED 141


>gi|308799797|ref|XP_003074679.1| Riboflavin kinase (ISS) [Ostreococcus tauri]
 gi|116000850|emb|CAL50530.1| Riboflavin kinase (ISS) [Ostreococcus tauri]
          Length = 168

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 18/135 (13%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL--------LKEGVYAIRFRTQ-DQTSYSGVANFGR 246
           V    +  + +G PTAN+   P++         L  GVY    +   + + +  V N G+
Sbjct: 31  VTGFGRGSKQMGVPTANL--DPELCGGEAFLSSLPLGVYFGWAKLAMESSWHECVLNVGK 88

Query: 247 NPTMVPNGPLLLESFIFD-------FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
            PT V      +E  +         + ++ YG+   V    ++RPE++F+ + +L   + 
Sbjct: 89  RPTFVDGDGATIEVHVMGASDAAKLYERDFYGETMRVEVRGFIRPEMRFESLPELVTRIR 148

Query: 300 EDEKKARKILESSYP 314
            D   AR  L S   
Sbjct: 149 ADIGLARNALASGAH 163


>gi|115455987|ref|NP_001051594.1| Os03g0801700 [Oryza sativa Japonica Group]
 gi|108711599|gb|ABF99394.1| riboflavin biosynthesis protein, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113550065|dbj|BAF13508.1| Os03g0801700 [Oryza sativa Japonica Group]
 gi|222625981|gb|EEE60113.1| hypothetical protein OsJ_12987 [Oryza sativa Japonica Group]
          Length = 391

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 37/231 (16%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIFTLS 73
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q        S
Sbjct: 125 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 184

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
                           ++  ++ +E +     +  QF++++  + L+++ V+ G  +RFG
Sbjct: 185 WAPY---------CKNVVPIEYQVEFSKVRYLTPRQFVERLSRD-LKIQGVVAGENYRFG 234

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRN--------------NKSQIVSSSNIRTALTK 176
              +GD   L K  E++G     +  + +              +    VSSS +R AL  
Sbjct: 235 YRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAM 294

Query: 177 GHVLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           G +   + LLG +  +   V  +  +  + +  P + M   P     +G+Y
Sbjct: 295 GDMEYVSELLGRKHRLVLTVKENHLQERKRIMLPKSCMLNMP---PADGLY 342


>gi|108711600|gb|ABF99395.1| riboflavin biosynthesis protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 388

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 37/231 (16%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIFTLS 73
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q        S
Sbjct: 122 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 181

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
                           ++  ++ +E +     +  QF++++  + L+++ V+ G  +RFG
Sbjct: 182 WAPY---------CKNVVPIEYQVEFSKVRYLTPRQFVERLSRD-LKIQGVVAGENYRFG 231

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRN--------------NKSQIVSSSNIRTALTK 176
              +GD   L K  E++G     +  + +              +    VSSS +R AL  
Sbjct: 232 YRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAM 291

Query: 177 GHVLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           G +   + LLG +  +   V  +  +  + +  P + M   P     +G+Y
Sbjct: 292 GDMEYVSELLGRKHRLVLTVKENHLQERKRIMLPKSCMLNMP---PADGLY 339


>gi|218193925|gb|EEC76352.1| hypothetical protein OsI_13934 [Oryza sativa Indica Group]
          Length = 391

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 37/231 (16%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------VLSFNPHPRTIIQSSSPIFTLS 73
           G+VA+G FD +H+GH  +   A K      ++      VL +   P  + Q        S
Sbjct: 125 GIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRVLTS 184

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
                           ++  ++ +E +     +  QF++++  + L+++ V+ G  +RFG
Sbjct: 185 WAPY---------CKNVVPIEYQVEFSKVRYLTPRQFVERLSRD-LKIQGVVAGENYRFG 234

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRN--------------NKSQIVSSSNIRTALTK 176
              +GD   L K  E++G     +  + +              +    VSSS +R AL  
Sbjct: 235 YRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAM 294

Query: 177 GHVLNAAHLLGYRFTIESDV-IHGEKIGRTLGFPTANMQLSPDILLKEGVY 226
           G +   + LLG +  +   V  +  +  + +  P + M   P     +G+Y
Sbjct: 295 GDMEYVSELLGRKHRLVLTVKENHLQERKRIMLPKSCMLNMP---PADGLY 342


>gi|189536414|ref|XP_689407.3| PREDICTED: riboflavin kinase [Danio rerio]
          Length = 163

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +     V+ G   G   LG PTAN   S  D L  +   G+Y    R  +   + 
Sbjct: 1   MRSLPYFFRGPVVRGFGRGSKDLGIPTANFPESVVDSLPTDISTGIYYGWARLDNGDIHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ +   F ++ YG   +V+   Y+RPE  F  +++L   +
Sbjct: 61  MVMSIGWNP-YYKNTKKSMEAHVIHTFKEDFYGHILSVAMAGYIRPERGFTSLDELITAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A+K L+    L  ++ 
Sbjct: 120 HNDIEEAKKKLDLPEHLKLKED 141


>gi|308457605|ref|XP_003091175.1| hypothetical protein CRE_15042 [Caenorhabditis remanei]
 gi|308258129|gb|EFP02082.1| hypothetical protein CRE_15042 [Caenorhabditis remanei]
          Length = 135

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEG----VYAIRFRTQDQTSYS 239
           +    +  E +V+ G   G   LG PTANM  +    L EG    VY  +   +  T YS
Sbjct: 1   MQILPYHFEGEVVRGFGRGGKELGCPTANMDDTVIENLPEGLKVGVYYGKATFKGNT-YS 59

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NP    N    +E  + D+   + YG+R +     Y+R    F  +E+LK  +
Sbjct: 60  MAMSVGWNPQYH-NEKKTVEVHLIDYAGGDFYGKRLSAVIVGYIRDMRSFASLEELKTAI 118

Query: 299 GEDEKKARK 307
            +D + AR+
Sbjct: 119 AKDIEIARR 127


>gi|110289212|gb|ABG66125.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 397

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 17/194 (8%)

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFT 191
             G+  G H + +  +    ++  S+  +  +L                    L    + 
Sbjct: 181 AAGKAAGMHVIAVPSVPKRTAEFSSADEVINSLLDVKPEKWGLPPFSDWIDDTLPIEPWF 240

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGR 246
           I   VI G   G   LG PTAN+       +      GVY        +  +  V + G 
Sbjct: 241 IGGPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGW 300

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP    N    +E ++  DF ++ YG+   +    Y+RPE  F  +E L   + ED + +
Sbjct: 301 NPYF-DNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARIS 359

Query: 306 RKILESSYPLSERD 319
            K L        +D
Sbjct: 360 DKALNLPLYAKYKD 373


>gi|115482402|ref|NP_001064794.1| Os10g0464400 [Oryza sativa Japonica Group]
 gi|22758323|gb|AAN05527.1| putative glutamine synthetase [Oryza sativa Japonica Group]
 gi|31432562|gb|AAP54177.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
           protein, expressed [Oryza sativa Japonica Group]
 gi|33242903|gb|AAQ01155.1| GS1-like protein [Oryza sativa]
 gi|113639403|dbj|BAF26708.1| Os10g0464400 [Oryza sativa Japonica Group]
 gi|125575069|gb|EAZ16353.1| hypothetical protein OsJ_31815 [Oryza sativa Japonica Group]
 gi|215692951|dbj|BAG88371.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694884|dbj|BAG90075.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 397

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 17/194 (8%)

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFT 191
             G+  G H + +  +    ++  S+  +  +L                    L    + 
Sbjct: 181 AAGKAAGMHVIAVPSVPKRTAEFSSADEVINSLLDVKPEKWGLPPFSDWIDDTLPIEPWF 240

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANFGR 246
           I   VI G   G   LG PTAN+       +      GVY        +  +  V + G 
Sbjct: 241 IGGPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGW 300

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP    N    +E ++  DF ++ YG+   +    Y+RPE  F  +E L   + ED + +
Sbjct: 301 NPYF-DNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARIS 359

Query: 306 RKILESSYPLSERD 319
            K L        +D
Sbjct: 360 DKALNLPLYAKYKD 373


>gi|149606991|ref|XP_001516422.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 191

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYS 239
           +    +    +V+ G   G   LG PTAN      + L  +   G+Y       +   + 
Sbjct: 1   MKYLPYFCRGEVVRGFGRGSKQLGIPTANFPEDIVEDLPPDMSTGIYYGWACVGNGEVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+  + +F ++ YG+  ++    Y+RPE  F+ I+ L   +
Sbjct: 61  MVLSVGWNP-YYRNAKKSMETHIMHNFKEDFYGEMLSIIITGYIRPEESFESIDALIAAI 119

Query: 299 GEDEKKARKILESSYPLSERDR 320
             D ++A+K L+       +D 
Sbjct: 120 RNDIEEAKKRLDYPEHSKFKDN 141


>gi|125531419|gb|EAY77984.1| hypothetical protein OsI_33028 [Oryza sativa Indica Group]
          Length = 301

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLG 187
             L    +      + +  +    ++  S+  +  +L                    L  
Sbjct: 81  DSLCCSWKSCRNACIAVPSVPKRTAEFSSADEVINSLLDVRPEKWGLRPFSDWIDDTLPI 140

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVA 242
             + I   VI G   G   LG PTAN+       +      GVY        +  Y  V 
Sbjct: 141 EPWFIGGPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIYKLVM 200

Query: 243 NFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + G NP    N    +E ++  DF ++ YG+   +    Y+RPE  F  +E L   + ED
Sbjct: 201 SIGWNPYF-DNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHED 259

Query: 302 EKKARKIL 309
            + A K L
Sbjct: 260 ARIAEKAL 267


>gi|145341161|ref|XP_001415682.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575905|gb|ABO93974.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 126

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPD------ILLKEGVYAIRFRTQDQ-TSYSGVANFGRNP 248
           V    +  + +G PTAN+             L  GVY    + + +   +  V N G+ P
Sbjct: 2   VTGFGRGSKQMGVPTANLDPETCGGEAVLSALPLGVYFGWAKREGESNWHECVLNVGKRP 61

Query: 249 TMVPNGPLLLESFIF-------DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           T V      +E  +        ++  + YG+   V    ++RPE++F  + +L   +  D
Sbjct: 62  TFVDGDGTTIEVHVMGASDATPEYEDDFYGETMRVDVCGFIRPELRFDSLPELVARIKTD 121

Query: 302 EKKAR 306
              AR
Sbjct: 122 IGLAR 126


>gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus
           communis]
 gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus
           communis]
          Length = 382

 Score = 99.9 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLGYRFTIES 194
           +  G   V +  +        ++  +  +L                    L    + I  
Sbjct: 184 KAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFEDWVEGTLPVEPWHIGG 243

Query: 195 DVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVANFGRNPT 249
            V+ G   G   LG PTAN+       +      GVY        +  Y  V + G NP 
Sbjct: 244 PVVKGFGRGSKVLGIPTANLSTEGYSAVLSQHPSGVYFGWAALSTRGVYKMVMSIGWNPY 303

Query: 250 MVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
              N    +E ++  +F ++ YG+   +    Y+RPE  F  +E L   + ED K A   
Sbjct: 304 FN-NVEKTIEPWLLHEFEEDFYGEELRLVIVGYIRPEANFPSLESLVAKIQEDRKVAEIA 362

Query: 309 LESSYPLSERDR 320
           L+       RD 
Sbjct: 363 LDLPLYSKFRDD 374


>gi|145532627|ref|XP_001452069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419746|emb|CAK84672.1| unnamed protein product [Paramecium tetraurelia]
          Length = 324

 Score = 99.9 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 9/128 (7%)

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYAIRFRTQDQTSYSGV 241
                 S +IHG   G T LG PTAN+Q++ +I      L  GVYA     ++   Y GV
Sbjct: 197 NPIEFTSKIIHGRNRGGTMLGIPTANLQINEEIQQLTKNLLPGVYAGITYLEN-KQYGGV 255

Query: 242 ANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP  + + P  +E  ++ +F ++ YG    +    +LRPE  F+  + L   +  
Sbjct: 256 LSIGYNPYFL-DTPQTIEVHLYGEFQEDFYGANLRLIITHFLRPESDFRTFDHLIKAISN 314

Query: 301 DEKKARKI 308
           D+  ARK+
Sbjct: 315 DKIIARKL 322


>gi|156546795|ref|XP_001605830.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
          Length = 148

 Score = 99.9 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 8/138 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
            +    +V+ G   G   LG PTAN+       L      G+Y      + +T Y  V +
Sbjct: 8   PYYAAGEVVSGFGRGSKSLGCPTANLSEEIVEALPSEFETGIYYGWASLE-KTIYKMVMS 66

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E  +   F  + YG+   V    Y+RPE+ F  +++L   + +D 
Sbjct: 67  IGWNP-FYKNDKKSMEIHLLHKFEDDFYGKELKVIVLGYIRPELNFSSVDQLIKAINKDI 125

Query: 303 KKARKILESSYPLSERDR 320
           + A K L+ +  +  ++ 
Sbjct: 126 EVADKSLDEATSVKYKED 143


>gi|303287376|ref|XP_003062977.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455613|gb|EEH52916.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 138

 Score = 99.9 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 13/136 (9%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPDIL------LKEGVYAIRFRTQDQTSYSG----VANFG 245
           V    +  + +G PTAN+   PD+L      +++GVY    R      ++     V N G
Sbjct: 5   VYGFGRGSKKMGVPTANL--DPDVLEEELGSMRKGVYFGYARLPADEKHAAWTKCVVNVG 62

Query: 246 RNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
             PT      + +E+    D+ ++ YG+   V    YLRPE+KF  +  L   +  D   
Sbjct: 63  SRPTFADGDGVTVETHALRDYGRDFYGEDMEVVVVGYLRPEMKFDGMAALVNRIMTDIGL 122

Query: 305 ARKILESSYPLSERDR 320
           AR  L+        D 
Sbjct: 123 ARNALDDPGHRRRADD 138


>gi|50365099|ref|YP_053524.1| riboflavin kinase/FAD synthase [Mesoplasma florum L1]
 gi|50363655|gb|AAT75640.1| riboflavin kinase/FAD synthase [Mesoplasma florum L1]
          Length = 189

 Score = 99.1 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 19/184 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILE--QAIKIANNSPITVLSFNPH 58
           M VF   +IN  + N  +     IG FD +H  H LI+E  Q I   NN    +++F+  
Sbjct: 10  MKVFKT-DINSIIQNE-RETCATIGMFDALHKYHKLIIEKTQTIAQENNLESIIITFD-- 65

Query: 59  PRTIIQSSSPIFTLSPPSIQEKIL-EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
                + +    TL   + +   + E      +I  +   +  N S EQF+ K+L    +
Sbjct: 66  ----HKPTKGTETLLNENKKINYINENFQIDKMIILQVNNDLINTSKEQFV-KILKNKFK 120

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           V  ++ G+ FRFG +++GD   L+     +G   VFI      + + +S+S I+  + + 
Sbjct: 121 VIKLVEGSDFRFGFEKSGDVEYLK---NSFGEKNVFI----YERDKNISTSKIKKLVKEN 173

Query: 178 HVLN 181
            +  
Sbjct: 174 KIAE 177


>gi|302850271|ref|XP_002956663.1| hypothetical protein VOLCADRAFT_107321 [Volvox carteri f.
           nagariensis]
 gi|300258024|gb|EFJ42265.1| hypothetical protein VOLCADRAFT_107321 [Volvox carteri f.
           nagariensis]
          Length = 394

 Score = 99.1 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 17/135 (12%)

Query: 194 SDVIHGEKI-GRTLGFPTANMQLSPDIL----LKEGVYAIRFRT--------QDQTSYSG 240
             V+ G     R LG PTAN+  +P       +  GVY    +          D   +  
Sbjct: 242 GTVVRGFGRGSRQLGTPTANIDPAPLRRTLGGMPPGVYFGWAKLEAPVGWPAGDSNVHKA 301

Query: 241 VANFGRNPTMVPNGP-LLLESFI---FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           V N G  PT+   G    +E  I   F   +E YG    V    +LRPEI+F  +E L  
Sbjct: 302 VLNIGSRPTVNKGGEAPSVEVHILHEFQGGEEFYGSHLEVLVVGFLRPEIRFSGVETLLA 361

Query: 297 YMGEDEKKARKILES 311
            +  D   AR  L++
Sbjct: 362 RIRTDTAIARLQLDT 376


>gi|289810135|ref|ZP_06540764.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          AG3]
          Length = 81

 Score = 98.7 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
          M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1  MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59 PRTIIQSSSPIFTLSPPSIQEKI 81
          P  +  +      L+    +  +
Sbjct: 58 PLELFATDKAPARLTRLRRKTAL 80


>gi|293363089|ref|XP_002730309.1| PREDICTED: similar to riboflavin kinase isoform 1 [Rattus
           norvegicus]
          Length = 136

 Score = 97.9 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    F     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG+   V+   YLRPE  F  +E L   +
Sbjct: 61  MVVSIGWNP-YYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAI 119

Query: 299 GEDEKKARK 307
             D ++A++
Sbjct: 120 QGDIEEAKR 128


>gi|328782055|ref|XP_003250076.1| PREDICTED: riboflavin kinase-like [Apis mellifera]
          Length = 147

 Score = 97.9 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVANF 244
           + +   V+ G   G   LG PTAN++ +    L      G+Y       D   Y  VA+ 
Sbjct: 8   YFLSGSVVRGFGRGSKALGIPTANLEDNVVENLPNDFNTGIYYGWASI-DGQIYKMVASI 66

Query: 245 GRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP    N    +E  +   F  + YG++    F  Y+RPE  F   E+L   +  D  
Sbjct: 67  GWNP-FYKNKKKTVELHLIHTFENDFYGKQIKAIFVGYIRPEKNFTSEEELIKAIKTDIA 125

Query: 304 KARKILES 311
            A + L+ 
Sbjct: 126 FAEEQLQK 133


>gi|213027445|ref|ZP_03341892.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          404ty]
          Length = 77

 Score = 97.9 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK--IANNSPITVLSFNPH 58
          M +   I    +L     G V+ IGNFDG+H GH  +L+   +       P+ V+ F P 
Sbjct: 1  MKLIRGI---HNLSQAPHGCVLTIGNFDGVHRGHRALLQGLQEEGRRRGLPVVVMIFEPQ 57

Query: 59 PRTIIQSSSPIFTLSPPSIQ 78
          P  +  +      L+    +
Sbjct: 58 PLELFATDKAPARLTRLREK 77


>gi|56758780|gb|AAW27530.1| SJCHGC02943 protein [Schistosoma japonicum]
          Length = 153

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 7/136 (5%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ--LSPDIL--LKEGVYAIRFRTQDQTSYSG 240
            G  F     V+HG   G   LG PTAN++  +   I   +K G+Y    +  +   Y  
Sbjct: 7   NGALFYAAGKVVHGFGRGSKQLGIPTANLEEFIVDQIPDSVKNGIYFGWAKLNNTPVYKM 66

Query: 241 VANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           V + G NP    N    +E  I   F +  YG    +    + RPE+ F  I  L   + 
Sbjct: 67  VMSIGWNPYF-KNAKRSMEVHILHHFEENFYGDTIKLIAVKFSRPELDFPSITDLIKQIH 125

Query: 300 EDEKKARKILESSYPL 315
            D  +A   L  S  L
Sbjct: 126 IDISEANSFLNKSEAL 141


>gi|159463528|ref|XP_001689994.1| riboflavin kinase [Chlamydomonas reinhardtii]
 gi|158283982|gb|EDP09732.1| riboflavin kinase [Chlamydomonas reinhardtii]
          Length = 399

 Score = 97.5 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 182 AAHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQ--LSPDIL--LKEGVYAIRFRTQ--- 233
           A + L     +   V+ G     R +G PTAN++  L  + L  +K GVY    +     
Sbjct: 240 AHYRLRTPLALRGKVVKGYGRGSRQMGTPTANIETGLVKEALASMKPGVYFGWAKLNPPH 299

Query: 234 -----DQTSYSGVANFGRNPTMV-PNGPLLLESFIFDF---SQEIYGQRCTVSFFDYLRP 284
                D   +  V N G  PT+   +    LE  I       QE YG    V    +LRP
Sbjct: 300 GWPSVDSDVHKMVLNVGSRPTVNKGDEAPSLECHILHHFEGGQEFYGSELEVLVLGFLRP 359

Query: 285 EIKFKDIEKLKIYMGEDEKKARKILESSY 313
           EIKF  ++ L   +  D   AR  LE+  
Sbjct: 360 EIKFGSVDALVSRIRADIATARVQLEAPQ 388


>gi|241998286|ref|XP_002433786.1| riboflavin kinase/fmn adenylyltransferase, putative [Ixodes
           scapularis]
 gi|215495545|gb|EEC05186.1| riboflavin kinase/fmn adenylyltransferase, putative [Ixodes
           scapularis]
          Length = 171

 Score = 97.2 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 7/132 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           +      I   V+ G   G   LG PTAN        L E    GVY       D     
Sbjct: 13  MKCLPLFIRGTVVKGFGRGSKQLGIPTANFSHDLVSKLPEELDCGVYYGWAAINDGPVNK 72

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F ++ YG    +    YLRPE  F  +E+L   +
Sbjct: 73  MVMSVGWNP-YYKNEKKSVETHIMARFPEDFYGAMLRIVVLGYLRPEKNFNSVEELVTAI 131

Query: 299 GEDEKKARKILE 310
             D + A + L+
Sbjct: 132 ETDIRDADQNLD 143


>gi|168026625|ref|XP_001765832.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683009|gb|EDQ69423.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 396

 Score = 97.2 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 19/184 (10%)

Query: 145 EKYGFHTVFIDEL--RNNKSQIVSSSNIRTALTKGHVLNA-----AHLLG-----YRFTI 192
           +  G   V +  +  ++ + Q  S+  I ++L                +G       + +
Sbjct: 190 KAAGMQVVAVPSIPSKDARPQYSSADVIYSSLLDFQPEVWGFPSLNDRIGGAIPIEPWYM 249

Query: 193 ESDVIHGEKIGRTL-GFPTANMQLS--PDILLKE--GVYAIRFRTQDQTSYSGVANFGRN 247
              VI G   G  L G PTAN+  S   + L     G+Y       ++  Y  V + G N
Sbjct: 250 GGPVIKGFGRGSKLLGTPTANLPTSAFSNHLASHVCGIYIGWAGLANRGVYKMVMSVGWN 309

Query: 248 PTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P    N    +E +I  DFS++ YG+   +    Y+RPE  F  +E L   + ED + A+
Sbjct: 310 PYF-DNKEKAVEPWILHDFSEDFYGEELRLIVVGYVRPEANFTTLEDLVERIHEDGRVAK 368

Query: 307 KILE 310
             L+
Sbjct: 369 AALD 372


>gi|195996533|ref|XP_002108135.1| hypothetical protein TRIADDRAFT_52300 [Trichoplax adhaerens]
 gi|190588911|gb|EDV28933.1| hypothetical protein TRIADDRAFT_52300 [Trichoplax adhaerens]
          Length = 155

 Score = 96.8 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK----EGVYAIRFRTQDQTSYS 239
           L      ++  V+ G   G   LG PTAN   +    L      G+Y       D   + 
Sbjct: 5   LAKLPAYVKGTVVKGFGRGSKELGIPTANFSENVMESLAGDTGNGIYFGLAAVDDSPVHK 64

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E  +  DF  + YG    V    ++RPE  F  +++L   +
Sbjct: 65  MVMSIGWNP-YYKNTKKTMEVHVIHDFENDFYGSELRVIVLGHIRPEKDFSSLDQLIAEI 123

Query: 299 GEDEKKARKILES 311
             D + A+  LE 
Sbjct: 124 HNDIRIAKSRLEE 136


>gi|307205600|gb|EFN83892.1| Riboflavin kinase [Harpegnathos saltator]
          Length = 147

 Score = 96.8 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 8/137 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
            +     ++ G   G   LG PTAN   S    L +    G+Y      Q +  Y  VA+
Sbjct: 7   PYFAAGTIVKGFGRGSKALGIPTANFSESVVNTLPDDLNTGIYYGWASLQ-KQIYKMVAS 65

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E  +   F  ++YG+   V    Y+RPE  F   E+L   +  D 
Sbjct: 66  IGWNP-YYKNEKKSVEVHLLHKFQDDLYGEELKVIIAGYIRPEKDFSSEEELIKEIKNDI 124

Query: 303 KKARKILESSYPLSERD 319
             A K L+       +D
Sbjct: 125 AIAEKRLDEPVTNKLKD 141


>gi|322787655|gb|EFZ13679.1| hypothetical protein SINV_10326 [Solenopsis invicta]
          Length = 151

 Score = 96.8 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 8/129 (6%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVAN 243
            F +   +I G   G   LG PTAN+       L K+   G+Y         T Y  VA+
Sbjct: 7   PFFVSGIIIKGFGRGSRALGIPTANLSEPVVSALPKDLNTGIYYGWASLHG-TVYKMVAS 65

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E  +   F  + YG+   V    Y+RPE  F  +++L   +  D 
Sbjct: 66  IGWNP-YYKNEKKSMEVHLLHKFQDDFYGEELKVIISGYIRPERDFSSLDELVTEIKNDI 124

Query: 303 KKARKILES 311
             A + LE 
Sbjct: 125 AIAERQLEE 133


>gi|302695687|ref|XP_003037522.1| hypothetical protein SCHCODRAFT_13754 [Schizophyllum commune H4-8]
 gi|300111219|gb|EFJ02620.1| hypothetical protein SCHCODRAFT_13754 [Schizophyllum commune H4-8]
          Length = 190

 Score = 96.4 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 51/147 (34%), Gaps = 25/147 (17%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFRTQ------- 233
            Y   +E  VI G   G   LG PTAN+ +           K GVY      +       
Sbjct: 18  PYPLRMEGKVIKGFGRGSKELGIPTANLPVDESSTPWIADVKSGVYFGWASLRLPSSHPN 77

Query: 234 ----------DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYL 282
                       + Y  V + G NP +  N     E  +  DFS + YG    +    ++
Sbjct: 78  HPMPSSEAPSGFSIYPMVMSIGYNP-VYKNKERSAEVHVLHDFSADFYGVEMRLLIMGFI 136

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKIL 309
           R E  +  ++ L   +  D   AR  L
Sbjct: 137 REEKDYPSLDALIEDIHTDCDVARNSL 163


>gi|17541882|ref|NP_501922.1| hypothetical protein R10H10.6 [Caenorhabditis elegans]
 gi|3879154|emb|CAA94613.1| C. elegans protein R10H10.6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 135

 Score = 96.0 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLS-----PDILLKEGVYAIRFRTQDQTSY 238
           +    +    +V+ G   G   LG PTANM  +     P+ L   GVY    +  D  SY
Sbjct: 1   MNLLPYQFVGEVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPV-GVYFGTAK-LDGKSY 58

Query: 239 SGVANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP    N    +E  + D+S  + YG+  +     ++R    F+ +++LK  
Sbjct: 59  KMAMSIGWNPQYQ-NEKKTVELHLIDYSGSDFYGKTLSAVIIGFIREMKSFESLDELKSA 117

Query: 298 MGEDEKKARK 307
           +  D K AR+
Sbjct: 118 IAMDIKVARR 127


>gi|268553171|ref|XP_002634570.1| Hypothetical protein CBG08376 [Caenorhabditis briggsae]
 gi|187032738|emb|CAP28212.1| hypothetical protein CBG_08376 [Caenorhabditis briggsae AF16]
          Length = 135

 Score = 96.0 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           +    +  E +V+ G   G   LG PTANM  S    L E    GVY       +   YS
Sbjct: 1   MQILPYRFEGEVVRGFGRGGKELGCPTANMDDSVIQNLPESLQVGVYYG-TAILEGEKYS 59

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDF-SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
              + G NP    N    +E  + D+   + YG+R +     ++R    F  + +LK  +
Sbjct: 60  MAMSIGWNPQYQ-NEKKTVEIHLIDYAGGDFYGKRLSAVIIGFIREMKSFGSLGELKSAI 118

Query: 299 GEDEKKARK 307
            +D + AR+
Sbjct: 119 AKDIEVARR 127


>gi|327263542|ref|XP_003216578.1| PREDICTED: riboflavin kinase-like [Anolis carolinensis]
          Length = 156

 Score = 95.6 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGVAN 243
            +    +V+ G   G   LG PTAN      D    +   G+Y       +   +  V +
Sbjct: 5   PYFCRGEVVRGFGRGSKELGIPTANFSEEVVDSFPADISTGIYYGWACVGNGDVHKMVLS 64

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   F ++ YG+  ++    Y+RPE  F+ ++ L   +  D 
Sbjct: 65  IGWNP-YYKNVKKSVETHIIHTFEEDFYGEILSIIIVGYIRPEKNFESLDALIAAIKSDI 123

Query: 303 KKARKILE 310
           +++ K LE
Sbjct: 124 EESEKTLE 131


>gi|320162605|gb|EFW39504.1| riboflavin kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 190

 Score = 95.6 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 55/155 (35%), Gaps = 30/155 (19%)

Query: 191 TIESDVIHGEKIGRT-LGFPTANMQLSPDIL------LKEGVYAIRFRT----------- 232
            +   VI G   G   LG PTAN+    DI       +  G+Y                 
Sbjct: 20  FLRGTVIKGFGRGSKELGIPTANL--PEDIANSMSEGISTGIYYGWASVTQSKASGSGSS 77

Query: 233 --------QDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLR 283
                        Y  V + G NP    N     E  I  DF+Q+ YG    V    Y+R
Sbjct: 78  STPAPAAPAAAPVYPMVMSVGWNP-FYKNEKRSAEVHIIHDFAQDFYGDELAVVVTGYIR 136

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
           PE+ F  ++ L   +  D +KA+K LE       +
Sbjct: 137 PELSFTTLDALIAAIHADIEKAKKDLELPEHAQYK 171


>gi|326935085|ref|XP_003213609.1| PREDICTED: riboflavin kinase-like, partial [Meleagris gallopavo]
          Length = 123

 Score = 95.2 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFF 279
           +  G+Y       +   +  V + G NP    N    +E+ I + F ++ YG+  ++   
Sbjct: 14  IPTGIYYGWASVGNGDVHKMVLSIGWNP-FYKNIKKSVETHIINTFKEDFYGEILSIVIT 72

Query: 280 DYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRII 322
            Y+R E  F  +E L   + ED ++A++ L+    L  +D   
Sbjct: 73  GYIRSEKNFNSLETLISAIKEDIEEAKRQLDLPEHLKLKDNFF 115


>gi|82913424|ref|XP_728638.1| virulence factor MVIN [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485091|gb|EAA20203.1| Virulence factor MVIN, putative [Plasmodium yoelii yoelii]
          Length = 1197

 Score = 95.2 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVLSFNPHPRTIIQSSSPIFT 71
           P HL     AIGNFDG+HLGH  ++ +  +  +    P+ ++ F P PR           
Sbjct: 494 PRHLLLSEKAIGNFDGVHLGHQTLVRRLTEQGHRLGLPVALVLFEPQPREFFDQDQSPPR 553

Query: 72  LSPPSIQEKILEKMGFSALIRYK 94
           L   S +   L ++    ++   
Sbjct: 554 LMRLSEKLTRLAELPVDWVLLLP 576


>gi|91086741|ref|XP_971589.1| PREDICTED: similar to riboflavin kinase [Tribolium castaneum]
          Length = 148

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYS 239
           G     +  V+ G   G   LG PTAN        L  +     GVY    + ++   Y 
Sbjct: 5   GLPHFAQGKVVKGFGRGSKELGIPTANFDEDVVGNLPEETEP--GVYFGFAQIENGPIYK 62

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E++I   F ++ YG+   V    YLR E  FK +E L   +
Sbjct: 63  MVMSVGWNP-FYKNTKKSMETYIIHKFDEDFYGKILKVVMLGYLRSEKDFKSVEDLIQAI 121

Query: 299 GEDEKKARKILESSY 313
             D  +A+  L+   
Sbjct: 122 NNDVLEAQTKLDEEQ 136


>gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 13/135 (9%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
            + I   VI G   G   LG PTAN+       L      GVY        Q  Y  V +
Sbjct: 733 PWYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMS 792

Query: 244 FGRNPTMVPNGPLLL-------ESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLK 295
            G NP        ++       E ++  +F ++ YG+   +    Y+RPE  F  +E L 
Sbjct: 793 IGWNPYFNNTEKTIVSATWTVKEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLI 852

Query: 296 IYMGEDEKKARKILE 310
             + ED + A + L+
Sbjct: 853 AKIHEDRRIAERALD 867


>gi|157060594|gb|ABV03303.1| RibF [Chlamydia trachomatis]
 gi|157060596|gb|ABV03304.1| RibF [Chlamydia trachomatis]
 gi|157060598|gb|ABV03305.1| RibF [Chlamydia trachomatis]
 gi|157060600|gb|ABV03306.1| RibF [Chlamydia trachomatis]
 gi|157060602|gb|ABV03307.1| RibF [Chlamydia trachomatis]
 gi|157060604|gb|ABV03308.1| RibF [Chlamydia trachomatis]
 gi|157060608|gb|ABV03310.1| RibF [Chlamydia trachomatis]
          Length = 122

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK   G    L+      G     +  L+  +  IVSS  IR  L +  + +A   LG  
Sbjct: 1   GKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLCSAEKFLGRP 59

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F     V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PT
Sbjct: 60  FAYTGKVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPT 117

Query: 250 MVPNG 254
           M  + 
Sbjct: 118 MQRHQ 122


>gi|157060618|gb|ABV03315.1| RibF [Chlamydia trachomatis]
          Length = 121

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK   G    L+      G     +  L+  +  IVSS  IR  L +  + +A   LG  
Sbjct: 1   GKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLCSAEKFLGRP 59

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F     V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PT
Sbjct: 60  FAYTGKVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPT 117

Query: 250 MVPN 253
           M  +
Sbjct: 118 MQRH 121


>gi|125532268|gb|EAY78833.1| hypothetical protein OsI_33938 [Oryza sativa Indica Group]
          Length = 348

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
            + I   VI G   G   LG PTAN+       +      GVY        +  +  V +
Sbjct: 189 PWFIGGPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMS 248

Query: 244 FGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E ++  DF ++ YG+   +    Y+RPE  F  +E L   + ED 
Sbjct: 249 IGWNPYF-DNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDA 307

Query: 303 KKARKILESSYPLSERD 319
           + + K L        +D
Sbjct: 308 RISDKALNLPLYAKYKD 324


>gi|207109167|ref|ZP_03243329.1| bifunctional riboflavin kinase/FMN adenylyltransferase
           [Helicobacter pylori HPKX_438_CA4C1]
          Length = 91

 Score = 94.8 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 219 ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSF 278
           IL   GVYA   + +D      V+  G    +  +    +E  + D   E   Q   + +
Sbjct: 2   ILPSFGVYASLVKVKDPIYQKSVSFIGNR--LSTDQNFAIECHVLDTIIENPPQEIALRW 59

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +R  ++F  +++LK  + +D  +A++IL 
Sbjct: 60  VQKIRDNMRFSSLKELKNQIQQDILRAKEILR 91


>gi|115481456|ref|NP_001064321.1| Os10g0209300 [Oryza sativa Japonica Group]
 gi|19881629|gb|AAM01030.1|AC091735_3 Putative Riboflavin biosynthesis protein ribF [Oryza sativa
           Japonica Group]
 gi|110288837|gb|ABG65995.1| Riboflavin kinase/FAD synthetase family protein [Oryza sativa
           Japonica Group]
 gi|113638930|dbj|BAF26235.1| Os10g0209300 [Oryza sativa Japonica Group]
          Length = 329

 Score = 94.8 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 65/188 (34%), Gaps = 17/188 (9%)

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA----------HLLG 187
             L    +      + +  +    ++  S+  +  +L                    L  
Sbjct: 109 DSLCCSWKSCRNACIAVPSVPKRTAEFSSADEVINSLLDVRPEKWGLRPFSDWIDDTLPI 168

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEG----VYAIRFRTQDQTSYSGVA 242
             + I   VI G   G   LG PTAN+       +       VY        +  Y  V 
Sbjct: 169 EPWFIGGSVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSRVYFGWAGLSTRGIYKMVM 228

Query: 243 NFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + G NP    N    +E ++  DF ++ YG+   +    Y+RPE  F  +E L   + ED
Sbjct: 229 SIGWNPYF-DNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHED 287

Query: 302 EKKARKIL 309
            + A K L
Sbjct: 288 ARIAEKAL 295


>gi|255084317|ref|XP_002508733.1| predicted protein [Micromonas sp. RCC299]
 gi|226524010|gb|ACO69991.1| predicted protein [Micromonas sp. RCC299]
          Length = 151

 Score = 94.8 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 14/132 (10%)

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSPDIL----LKEGVYAIRFRTQ-------DQTSYS 239
           +   V+ G   G   LG PTAN+ +SP  L    L  G+Y                  Y 
Sbjct: 1   MRGPVVKGFGRGSKMLGIPTANLDVSPLKLQADALAPGIYFGWAAVAKEDRRDVGGGVYR 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E ++  +F  + Y Q   +    Y+RPE  F  +E L   +
Sbjct: 61  MVMSIGWNP-FFDNAKKTIEPWLLHEFGGDFYDQELRLHVLGYIRPEANFTTLEDLVKRI 119

Query: 299 GEDEKKARKILE 310
             D + A+  L 
Sbjct: 120 HRDAEVAKTCLA 131


>gi|225712280|gb|ACO11986.1| Riboflavin kinase [Lepeophtheirus salmonis]
          Length = 153

 Score = 94.8 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
              +   +I G   G   LG PTAN  +   + L K+   G+Y    +  ++     V +
Sbjct: 10  HIPLSGKIIKGFGRGSKDLGIPTANFSEQVVETLPKDISTGIYFGWAQVDNKGPEKMVVS 69

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   +  ++YG+   +    Y+R E  ++ +E L   +  D 
Sbjct: 70  VGWNP-FYKNEKKTIETHILKKYDSDLYGRLLKILIVGYIREERNYESLEALIEDIHADI 128

Query: 303 KKARKILES 311
             A+  L++
Sbjct: 129 AYAKDRLDN 137


>gi|145341116|ref|XP_001415661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575884|gb|ABO93953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 289

 Score = 94.5 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 8/135 (5%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSPDIL----LKEGVYAIRFRTQDQTSYSGVANF 244
             +   V+ G   G T LG PTAN+ + P       L  G+Y      + +T +  V + 
Sbjct: 152 IEMRGPVVKGFGRGSTQLGIPTANLDIVPLKHQVDSLAPGIYLGFASIRGET-HKMVMSI 210

Query: 245 GRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           G NP    N    +E ++  +F  + YG+  ++    Y+RPE  F  +E L   +  D +
Sbjct: 211 GWNPYF-DNSKKTIEPWLLHEFESDFYGEELSLVVVGYIRPEADFTTLEALVERIHRDAE 269

Query: 304 KARKILESSYPLSER 318
            AR +LE    + +R
Sbjct: 270 VARVVLEREPFVGKR 284


>gi|290561288|gb|ADD38046.1| Riboflavin kinase [Lepeophtheirus salmonis]
          Length = 153

 Score = 94.5 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYSGVAN 243
              +   +I G   G   LG PTAN  +   + L K+   G+Y    +  ++     V +
Sbjct: 10  HIPLSGKIIKGFGRGSKDLGIPTANFSEQVVETLPKDISTGIYFGWAQVDNEGPEKMVVS 69

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E+ I   +  ++YG+   +    Y+R E  ++ +E L   +  D 
Sbjct: 70  VGWNP-FYKNEKKTIETHILKKYDSDLYGRLLKILIVGYIREERNYESLEALIEDIHADI 128

Query: 303 KKARKILES 311
             A+  L++
Sbjct: 129 AYAKDRLDN 137


>gi|157060606|gb|ABV03309.1| RibF [Chlamydia trachomatis]
          Length = 122

 Score = 94.5 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 3/125 (2%)

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           GK   G    L+      G     +  L+  +  IVSS  IR  L K  + +A   LG  
Sbjct: 1   GKGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLCSAEKFLGRP 59

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPT 249
           F+    V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PT
Sbjct: 60  FSYTGKVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPT 117

Query: 250 MVPNG 254
           M  + 
Sbjct: 118 MQRHQ 122


>gi|114625272|ref|XP_001149206.1| PREDICTED: riboflavin kinase [Pan troglodytes]
          Length = 186

 Score = 94.1 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 12/163 (7%)

Query: 162 SQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
                S     A        A    G                    FP    +   D L 
Sbjct: 18  GAWGGSLQREPAAGACGGSRARQRRGGAMMGRGYGSRAGSRPN---FP----EQVVDNLP 70

Query: 222 KE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVS 277
            +   G+Y           +  V + G NP    N    +E+ I   F ++ YG+   V+
Sbjct: 71  ADISTGIYYGWASVGSGDVHKMVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILNVA 129

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
              YLRPE  F  +E L   +  D ++A+K LE    L  ++ 
Sbjct: 130 IVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEHLKIKED 172


>gi|328866477|gb|EGG14861.1| riboflavin kinase [Dictyostelium fasciculatum]
          Length = 189

 Score = 93.7 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 10/126 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQ---DQTSYSG 240
               +  VI G   G   LG PTAN+ +     +      GVY          D   Y  
Sbjct: 19  PLFFKGTVIQGFGRGSKQLGIPTANLPVEEYESILNDIPIGVYYGWANVHGVNDNKIYKM 78

Query: 241 VANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
             + G NP    N    +E  + + F Q+ YG +       ++RP   F  +++L   + 
Sbjct: 79  AMSIGWNP-FYKNTKKTIEIHLINKFEQDFYGHQLNAIAVGFIRPMCDFSSLDELIKAIN 137

Query: 300 EDEKKA 305
           +D + A
Sbjct: 138 DDIEYA 143


>gi|321461574|gb|EFX72605.1| hypothetical protein DAPPUDRAFT_58831 [Daphnia pulex]
          Length = 170

 Score = 93.7 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 7/132 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTAN-MQLSPDILLKE---GVYAIRFRTQDQTSYS 239
           L    F  +  V+ G   G   LG PTAN M    D L  +   G+Y    +      Y 
Sbjct: 7   LGCLPFFAKGIVVKGFGRGSKELGIPTANYMSEVVDTLPSDMETGIYYGYAKVDGGPVYK 66

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F  + YG        +Y+RPE  ++ ++ L   +
Sbjct: 67  MVMSIGWNP-YYKNVKKSMETHILHKFESDFYGSLLKTCIINYIRPEQSYESLDALIDAI 125

Query: 299 GEDEKKARKILE 310
             D   A   L+
Sbjct: 126 KSDIAYADTQLD 137


>gi|219118032|ref|XP_002179799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408852|gb|EEC48785.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 153

 Score = 93.7 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 17/140 (12%)

Query: 190 FTIESDVIHGEKIG-RTLGFPTANMQ----LSPDILLKEGVYAIRFRTQDQT-------- 236
             +   V  G   G + LGFPTAN+      +    +  GVY      +           
Sbjct: 1   LRLRGKVDSGYGRGGKKLGFPTANLPSRLFQNALQDVPAGVYFGWALLESDELAAPGRNI 60

Query: 237 SYSGVANFGRNPTMVP--NGPLLLESFIFDFSQ--EIYGQRCTVSFFDYLRPEIKFKDIE 292
           ++  V N G +PT     N   ++E+ +       + Y +   +    +LRPEIKF    
Sbjct: 61  AHKAVVNVGFSPTFEGQENAEKIVEAHLMAEEPLTDFYNETMRLQLHGFLRPEIKFSSFP 120

Query: 293 KLKIYMGEDEKKARKILESS 312
            L   +  D   A++ L+ S
Sbjct: 121 DLIKQINADVVDAKEALDVS 140


>gi|324502943|gb|ADY41286.1| Riboflavin kinase [Ascaris suum]
          Length = 152

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 7/133 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYS 239
           +  + +     V+ G   G   LG PTAN+       L      GV+    +      Y 
Sbjct: 1   MDRFPYYFSGRVVTGFGRGGKQLGCPTANLDDGAIARLPSDFPCGVFYGLAQVDGGKLYG 60

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E  I   F ++ YG         YLR    F  ++ LK  +
Sbjct: 61  MVMSVGWNPHF-KNEKKTVEVHILHSFPEDFYGSNLRAVALGYLRSMTAFDSLDDLKEAI 119

Query: 299 GEDEKKARKILES 311
             D   A+  L S
Sbjct: 120 KNDIAVAQSNLSS 132


>gi|307182662|gb|EFN69796.1| Riboflavin kinase [Camponotus floridanus]
          Length = 151

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVAN 243
            + I   VI G   G   LG PTAN   S    L E    G+Y        Q  Y  V +
Sbjct: 7   PYFISGTVIKGFGRGSKALGIPTANFSESVVNDLPEDLNTGIYYGWASLHGQV-YKMVTS 65

Query: 244 FGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
            G NP    N    +E  +   F  + YG++  V    Y+RPE  F  +E+L   +  D 
Sbjct: 66  IGWNP-YYKNEKKSMEVHLLHKFHDDFYGKQIKVIITGYIRPERDFSSLEELVREIKNDI 124

Query: 303 KKARKILES 311
             A + LE 
Sbjct: 125 TIAEQKLED 133


>gi|308799713|ref|XP_003074637.1| putative glutamine synthetase (ISS) [Ostreococcus tauri]
 gi|116000808|emb|CAL50488.1| putative glutamine synthetase (ISS) [Ostreococcus tauri]
          Length = 380

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSPDIL----LKEGVYAIRFRTQDQTSYSGVANFGR 246
           +   V+ G   G   LG PTAN+ + P       L  G+Y      + +T +  V + G 
Sbjct: 245 MRGPVVKGFGRGSKMLGIPTANLDVVPLKSQVDSLAPGIYLGFASIRGET-HEMVMSIGW 303

Query: 247 NPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP    N    +E ++  +F  + Y +   V    Y+RPE  F  +E L   +  D + A
Sbjct: 304 NPYF-DNSKKTIEPWLLHEFPDDFYDEELAVVVSGYIRPEADFTTLEALVERIHRDAEVA 362

Query: 306 RKILESSYPLSERDRIIC 323
           R +L+++     R+ ++ 
Sbjct: 363 RTMLKNTPFKETRELLVA 380


>gi|289674845|ref|ZP_06495735.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Pseudomonas syringae pv. syringae FF5]
          Length = 75

 Score = 92.5 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
          M +   +    +L    +G V  IGNFDG+H GH  IL +  +       P  V+ F P 
Sbjct: 1  MQLVRGL---HNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQ 57

Query: 59 PRTIIQSSSPIFTLSPPS 76
          PR      +    L+   
Sbjct: 58 PREFFAPETAPARLARLR 75


>gi|281343262|gb|EFB18846.1| hypothetical protein PANDA_013888 [Ailuropoda melanoleuca]
          Length = 128

 Score = 92.5 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 220 LLKE---GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCT 275
           L  +   G+Y       +   +  V + G NP    N    +E+ I   F ++ YG+   
Sbjct: 11  LPADVSTGIYYGWASVGNGDVHKMVVSIGWNP-YYKNTKKSMETHIMHTFKEDFYGEILN 69

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
           V+   YLRPE  F  +E L   +  D ++A+K L+    L  ++ 
Sbjct: 70  VAIVGYLRPEKNFDSLESLISAIQADIEEAKKRLDLPEHLKFKED 114


>gi|157060612|gb|ABV03312.1| RibF [Chlamydia trachomatis]
          Length = 120

 Score = 92.1 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 3/123 (2%)

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K   G    L+      G     +  L+  +  IVSS  IR  L +  + +A   LG  F
Sbjct: 1   KGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLCSAEKFLGRPF 59

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
                V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PTM
Sbjct: 60  AYTGKVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPTM 117

Query: 251 VPN 253
             +
Sbjct: 118 QRH 120


>gi|126330254|ref|XP_001366863.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 163

 Score = 92.1 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 10/139 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQ------LSPDILLKEGVYAIRFRTQDQTSYSGV 241
            +     V+ G   G   LG PTAN        L  D+    G+Y       + +    V
Sbjct: 12  PYFCRGKVVRGFSRGSKQLGIPTANFPEQVVDNLPNDLSP--GIYYGWASVGNGSVQKMV 69

Query: 242 ANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G  P         +E+ I   F ++ YG+  ++    Y+RPE  F+ I+ L   + +
Sbjct: 70  LSIGWIPYCRYRKKKSVETHIIHTFKEDFYGEILSIVITGYIRPEKNFRSIDALISAIQD 129

Query: 301 DEKKARKILESSYPLSERD 319
           D ++A+K L     L  ++
Sbjct: 130 DLEEAKKRLNLPEHLKLKE 148


>gi|296775760|gb|ADH43029.1| FAD synthase [uncultured SAR11 cluster alpha proteobacterium
           H17925_45G17]
          Length = 158

 Score = 92.1 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 22/148 (14%)

Query: 195 DVIHGEKIGRTLGFPTANMQLS---PDILL--------------KEGVYAIRFRTQDQTS 237
            V    +  + LGFPTANM++     +  L                G+YA     +   S
Sbjct: 1   MVHGFGRGSKQLGFPTANMEIKWGDDESTLSEEEKAVYKFAKESPTGIYACYAVIEGPES 60

Query: 238 YSGV----ANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
             GV     + G NPT        +E +I  DFS++ Y     +    Y+R E+KF+D E
Sbjct: 61  CRGVHKVAMSMGWNPTFTDVKAKTIEPWILHDFSEDFYDCPLRLLVVAYVRDELKFEDFE 120

Query: 293 KLKIYMGEDEKKARKILESSYPLSERDR 320
           +LK  +  D     + L+     + RD 
Sbjct: 121 QLKREIAADGDYCNEALDKPELAALRDD 148


>gi|322698752|gb|EFY90520.1| Riboflavin kinase [Metarhizium acridum CQMa 102]
          Length = 351

 Score = 92.1 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 25/157 (15%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFRTQ------- 233
            Y + +E  VI G   G   LG PTAN+ +   +         GVY              
Sbjct: 187 PYPYRMEGKVISGFGRGSKELGIPTANLPVDSALTPWISSTPSGVYFGYASLNLPAAHPQ 246

Query: 234 --------DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRP 284
                     + Y  V + G NP    N     E  +  +FS + Y     +    ++R 
Sbjct: 247 KPASSPEASFSVYPMVMSIGYNP-FYKNTVRSAEVHVLHEFSADFYDAHMRLLILGFIRE 305

Query: 285 EIKFKDIEKLKIYMGEDEKKARKIL--ESSYPLSERD 319
           E  +K +E L   +  D + A+  L  E   P S RD
Sbjct: 306 ERDYKSLEALIEDISFDCEVAKSSLAREGWKPESLRD 342


>gi|157060614|gb|ABV03313.1| RibF [Chlamydia trachomatis]
          Length = 120

 Score = 91.8 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K   G    L+      G     +  L+  +  IVSS  IR  L K  + +A   LG  F
Sbjct: 1   KGGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLCSAEKFLGRPF 59

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
           +    V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PTM
Sbjct: 60  SYTGKVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPTM 117

Query: 251 VPN 253
             +
Sbjct: 118 QRH 120


>gi|323449805|gb|EGB05690.1| hypothetical protein AURANDRAFT_30516 [Aureococcus anophagefferens]
          Length = 175

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%)

Query: 194 SDVIHGEKIGR-TLGFPTANMQLSPDILL-----------------KEGVYAIRFRTQ-- 233
             V+HG   G   LGFPTAN+ ++    L                 + G+YA   +    
Sbjct: 23  GTVVHGFGRGSAQLGFPTANLAINWAEQLDTLTDEERDVRRFVDENRTGIYAAWAQVASG 82

Query: 234 -DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
            D+  Y    + G NP         +E+++  DF  + Y QR  +    Y+RPE+KF   
Sbjct: 83  ADRGVYKVAMSVGWNPHFGDLERKTIEAWLLHDFEADFYDQRLKLVVVGYVRPELKFDSF 142

Query: 292 EKLKIYMGED 301
           ++L   +  D
Sbjct: 143 DELIREIRAD 152


>gi|198427291|ref|XP_002131847.1| PREDICTED: similar to riboflavin kinase [Ciona intestinalis]
          Length = 181

 Score = 91.0 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTAN----MQLSPDILLKEGVYAIRFRTQDQTSYS 239
           +          V+ G   G   LG PTAN    +  +    L  G+Y    +      + 
Sbjct: 7   MKCLPHFCRGVVVKGFGRGSKQLGIPTANFPDSVVENLPCDLPTGIYYGWAQVNSGEVHK 66

Query: 240 GVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    +E+ I   F+++ Y    ++    Y+R E  F  ++ L   +
Sbjct: 67  MVLSVGWNP-YYKNEKKSMETHIIHSFNEDFYDSVLSIIMLGYIRGEENFSSLDDLISAI 125

Query: 299 GEDEKKAR 306
             D  KA+
Sbjct: 126 NNDIAKAK 133


>gi|157060616|gb|ABV03314.1| RibF [Chlamydia trachomatis]
          Length = 119

 Score = 91.0 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
              G    L+      G     +  L+  +  IVSS  IR  L +  + +A   LG  F 
Sbjct: 1   GGLGTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLCSAEKFLGRPFA 59

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMV 251
               V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PTM 
Sbjct: 60  YTGKVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPTMQ 117

Query: 252 PN 253
            +
Sbjct: 118 RH 119


>gi|294931943|ref|XP_002780064.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239889908|gb|EER11859.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 183

 Score = 91.0 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 18/162 (11%)

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLSPDILLKE------GVYAIRFR 231
           +    HLL     +   V  G   G  L G+PTAN+      + +       GVY    +
Sbjct: 8   ITRVLHLLEPPARLTGIVASGCGRGSKLLGYPTANITSDSPAVAQFLEAAETGVYLGFAQ 67

Query: 232 T----------QDQTSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFD 280
                       D+  +    + G NP+       L+E++ +  F+ + YG    +    
Sbjct: 68  VRYAKECSASKGDREVHPTALSVGVNPSFNDVKEKLVEAYIMHQFTSDFYGTELRLLVLG 127

Query: 281 YLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRII 322
             RPE+ F+ IE+LK  M  D       L +    + RD  +
Sbjct: 128 RFRPELPFESIEQLKAEMKIDCDFTMHELSTERLKAFRDDAL 169


>gi|157060624|gb|ABV03318.1| RibF [Chlamydia trachomatis]
          Length = 116

 Score = 90.6 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+      G     +  L+  +  IVSS  IR  L +  + +A   LG  F    
Sbjct: 1   GTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLREKDLCSAEKFLGRPFAYTG 59

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PTM  +
Sbjct: 60  KVAHGRGIGTSFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPTMQRH 116


>gi|157060620|gb|ABV03316.1| RibF [Chlamydia trachomatis]
 gi|157060622|gb|ABV03317.1| RibF [Chlamydia trachomatis]
          Length = 116

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
           G    L+      G     +  L+  +  IVSS  IR  L K  + +A   LG  F+   
Sbjct: 1   GTAQTLRPFAASLGISLEEVPPLQI-EGTIVSSRKIRQFLRKKDLCSAEKFLGRPFSYTG 59

Query: 195 DVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
            V HG  IG + G+ T N+ L+  +L   GVY      +   SY+GV N G  PTM  +
Sbjct: 60  KVAHGRGIGASFGYATINLPLTHSLLPL-GVYTCTIVIEGF-SYAGVMNLGMAPTMQRH 116


>gi|308126668|ref|ZP_07663851.1| riboflavin kinase [Vibrio parahaemolyticus AQ4037]
 gi|308107961|gb|EFO45501.1| riboflavin kinase [Vibrio parahaemolyticus AQ4037]
          Length = 79

 Score = 89.5 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANN--SPITVLSFNPH 58
          M +   I    ++  H  G V+ IGNFDG+H GH  +L+Q  + A     P  V++F P 
Sbjct: 1  MELIRGI---HNIAPHHYGCVLTIGNFDGVHKGHQQVLQQVSEQAEKLSLPSVVMTFEPQ 57

Query: 59 PRTIIQSSSPIFTLSPPSI 77
          P  +   +      +    
Sbjct: 58 PMELFAKTKRPHVDATARQ 76


>gi|303287460|ref|XP_003063019.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455655|gb|EEH52958.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 402

 Score = 89.5 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 78/249 (31%), Gaps = 40/249 (16%)

Query: 104 AEQFIQKVLVEWLE---VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN 160
            +  I ++    L     + V+       G   A          +  G H V +  +   
Sbjct: 156 PDPEIFRLAASRLGVDPARCVVI-EDTPLGVRAA----------KAAGMHVVAVPSIAKR 204

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHL------------------LGYRFTIESDVIHGEKI 202
               V +       +   +  AA L                  L     +   V+ G   
Sbjct: 205 DDLYVDAGADVVISSLYDLDFAAFLPAGSDWIAHETLLDPVLPLPEIVRVGGAVVKGFGR 264

Query: 203 GRT-LGFPTANMQLSPDIL----LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           G   LG PTAN+  +P  L    L  G+Y           Y  V + G NP    N    
Sbjct: 265 GSKVLGIPTANLDATPLKLQSDALAPGIYFGHAALPGGRIYDMVMSIGWNP-FFDNARKT 323

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
           +E ++  +F  + Y     ++   Y+RPE  F  +E L   +  D   A   L      +
Sbjct: 324 IEPWLLHEFESDFYDVELRLTVVGYVRPEANFTTLECLIARIRRDGDVASAALRMEPFAA 383

Query: 317 ER-DRIICF 324
            R D  + F
Sbjct: 384 HRNDAFLTF 392


>gi|291002011|ref|XP_002683572.1| predicted protein [Naegleria gruberi]
 gi|284097201|gb|EFC50828.1| predicted protein [Naegleria gruberi]
          Length = 161

 Score = 89.1 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 7/125 (5%)

Query: 192 IESDVIHGEKIGRTL-GFPTANMQLSPDILLKE---GVYAIRFRTQDQTSYSGVANFGRN 247
           I  +VI G   G  L G PTAN+ +     L +   GVY    + +  T    V + G N
Sbjct: 29  ITGEVIKGFGRGGKLLGIPTANLPIENCKELSQIEMGVYIGYAKIRGITC-KTVISIGNN 87

Query: 248 PTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           P    N    +E  +  DF+ + YG+  T+S   ++R   K+ +++ L   +  D     
Sbjct: 88  PHFQ-NEQKTIEPHLLHDFNSDFYGENLTISICGFIRYMEKYDNLDDLINAIKSDITIGS 146

Query: 307 KILES 311
           K L+ 
Sbjct: 147 KALDE 151


>gi|330806524|ref|XP_003291218.1| hypothetical protein DICPUDRAFT_92639 [Dictyostelium purpureum]
 gi|325078609|gb|EGC32251.1| hypothetical protein DICPUDRAFT_92639 [Dictyostelium purpureum]
          Length = 161

 Score = 89.1 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 10/132 (7%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL----LKEGVYAIRFRTQD---QTSYSG 240
               +  VI G   G   LG PTAN+ +         +  GVY      +       Y  
Sbjct: 15  PLYFKGSVITGFGRGSKQLGIPTANLPVEELEEELKDIPIGVYYGWANVEGLENDNVYPM 74

Query: 241 VANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
             + G NP    N    +E   I  F ++ YG         ++RP   FK +E+L   + 
Sbjct: 75  AMSIGWNP-FYKNTKKTIEIHLIHHFERDFYGAELRAIGLGFIRPMCDFKTLEELVKAIN 133

Query: 300 EDEKKARKILES 311
           +D +  +K LE 
Sbjct: 134 DDIEYGKKCLEK 145


>gi|323450029|gb|EGB05913.1| hypothetical protein AURANDRAFT_16279 [Aureococcus anophagefferens]
          Length = 133

 Score = 89.1 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 193 ESDVIHGEKIGRT-LGFPTANMQLS----PDILLKEGVYAIRFRTQDQ----TSYSGVAN 243
              V  G   G   LG PTAN+           +  GVY    +             V N
Sbjct: 5   RGPVARGYGRGGKDLGVPTANLPEDLFGDALRTVDAGVYGAWAKLAGDDPAAEPRPAVVN 64

Query: 244 FGRNPTMVP-NGPLLL-ESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            G +PT V    PL + E+ + D+   + YG+   +      RPE KF D   L   +  
Sbjct: 65  VGYSPTFVDAENPLKIAEAHLLDYEGGDFYGETMALVLVSRQRPEQKFPDFPTLLANIRN 124

Query: 301 DEKKARKIL 309
           D   AR+ L
Sbjct: 125 DIDVARRAL 133


>gi|224001818|ref|XP_002290581.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974003|gb|EED92333.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 322

 Score = 89.1 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 45/155 (29%), Gaps = 39/155 (25%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQ----LSPDILLKEGVYAIRFRTQD---------Q 235
             +   V  G   G   LG PTAN+      S    +  GVY      +           
Sbjct: 127 LRLRGPVATGYGRGGKQLGVPTANLPASLFQSALEDVATGVYFGWAVVEAPSTDSTIGRN 186

Query: 236 TSYSGVANFGRNPTMVP--NGPLLLESFIF-----------------------DFSQEIY 270
           T    V N G +PT     N   ++E+ +                            + Y
Sbjct: 187 TPIKAVVNVGYSPTFEGKENKEKIVEAHLITSNSPMEKNELADEYSTSSADDTKIEGDFY 246

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           G+   +    +LR E KF     L   +  D   A
Sbjct: 247 GETMRLQLIGFLRAERKFDSFPDLIAQIHRDIGNA 281


>gi|255083589|ref|XP_002508369.1| predicted protein [Micromonas sp. RCC299]
 gi|226523646|gb|ACO69627.1| predicted protein [Micromonas sp. RCC299]
          Length = 434

 Score = 89.1 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 13/127 (10%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKE------GVYAIRFRTQDQ----TSYSGVANFG 245
           V    +  + +G PTANM   P +L  +      GVY    R  D     +    V N G
Sbjct: 294 VSGFGRGSKQMGTPTANM--DPTVLAPQLERMRRGVYFGFARLPDDPDNDSWSKCVINVG 351

Query: 246 RNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
           + PT      + +E  +      + YG+        YLRPE++FK + +L   +  D   
Sbjct: 352 QRPTFADGDGVTIEVHVMRLMGRDFYGETMECVALGYLRPEMRFKGLRELVGRIMTDIGL 411

Query: 305 ARKILES 311
           AR  L++
Sbjct: 412 ARNALDA 418


>gi|213410297|ref|XP_002175918.1| riboflavin kinase [Schizosaccharomyces japonicus yFS275]
 gi|212003965|gb|EEB09625.1| riboflavin kinase [Schizosaccharomyces japonicus yFS275]
          Length = 177

 Score = 88.7 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 7/125 (5%)

Query: 187 GYRFTIESDVIHGEKI-GRTLGFPTANMQLSP-DILLKE---GVYAIRFRTQDQTSYSGV 241
            Y    + +V+HG     R +G PTAN+  S    LLKE   GVY    +  D   Y  V
Sbjct: 22  PYPIFFQGEVVHGFGRGSREMGIPTANILESAVQELLKERESGVYYGFAQVADGEVYPMV 81

Query: 242 ANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N     E  I   F Q+ YGQ+   +   Y+RPE+ ++ I+KL   +  
Sbjct: 82  MSVGWNP-YYNNEKRTAEIHIMHSFPQDFYGQQVRAAVMGYIRPELDYEGIDKLIADIHF 140

Query: 301 DEKKA 305
           D K A
Sbjct: 141 DIKVA 145


>gi|331233769|ref|XP_003329545.1| riboflavin kinase Fmn1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308535|gb|EFP85126.1| riboflavin kinase Fmn1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 194

 Score = 88.7 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 13/136 (9%)

Query: 187 GYRFTIESDVIHGEKI-GRTLGFPTANMQ---LSPDILLKEGVY----AIRFRTQDQTSY 238
            +   +   V HG K   R LG PTAN+     +   L + GVY    ++   + +    
Sbjct: 44  PFPVKLYGKVEHGFKRGSRELGCPTANLPATLTNNPALERNGVYFGWASVWITSPNPLPP 103

Query: 239 ---SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
                V + G NP +  N    +E  +   F Q+ YG+   V    ++RPE  +   E L
Sbjct: 104 VIKPMVMSVGYNP-VYGNKSRTIEVHVIPTFDQDFYGETVKVIVTGFIRPEYNYSSKEAL 162

Query: 295 KIYMGEDEKKARKILE 310
              +  D+  A + L+
Sbjct: 163 IQDIEIDKTAALQSLK 178


>gi|302830912|ref|XP_002947022.1| hypothetical protein VOLCADRAFT_103251 [Volvox carteri f.
           nagariensis]
 gi|300268066|gb|EFJ52248.1| hypothetical protein VOLCADRAFT_103251 [Volvox carteri f.
           nagariensis]
          Length = 576

 Score = 88.3 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 19/152 (12%)

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRT------------LGFPTANMQLSPDILLK-- 222
           GH+ +A   +     I   V+ G   G              LG PTAN+           
Sbjct: 211 GHLGDAVIPMDRVIRIRGKVVKGFGRGSKVKQWALGGEGADLGIPTANVDPEAVAAALAE 270

Query: 223 --EGVYAIRFRTQD-QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
              G+YA   R  +    +  V + G NP    N    LE +I   F +  YG+  ++  
Sbjct: 271 AVTGIYAGWARVGNRPEVHKTVLSIGWNP-FFGNKEKTLEPWILHSFDEPFYGETLSLVI 329

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             Y+RPE  F  +E L   +  D + +R  L+
Sbjct: 330 CGYVRPEANFSSLEALIARIHADAEVSRAALD 361


>gi|312084790|ref|XP_003144418.1| riboflavin kinase [Loa loa]
 gi|307760420|gb|EFO19654.1| riboflavin kinase [Loa loa]
          Length = 122

 Score = 88.3 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 4/111 (3%)

Query: 210 TANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQE 268
           TA  +L P      GV+           Y  V + G NP    N    +E  I  DF ++
Sbjct: 9   TAIARLPPHF--PCGVFYGFANVNHGEVYGMVTSIGWNPHF-KNERKTIEVHILHDFDED 65

Query: 269 IYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
            YG         ++RP + F  +++LK  +  D   A+ +L +   +  ++
Sbjct: 66  FYGAEVRAVLVGFMRPMVAFNSLDELKTAINNDMSTAKGLLSAPETIFYKN 116


>gi|240047631|ref|YP_002961019.1| hypothetical protein MCJ_005110 [Mycoplasma conjunctivae HRC/581]
 gi|239985203|emb|CAT05216.1| Riboflavin biosynthesis protein [Mycoplasma conjunctivae]
          Length = 280

 Score = 88.3 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 22/232 (9%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
            +  +     +G F+  H GH  ++ QA K  NN  I ++ F+  P+ + ++   IF  S
Sbjct: 11  NHRFEDATFVLGAFESFHQGHLSLINQAPK--NNKTIVLVIFSN-PQDLPKNRGKIF--S 65

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
             + + + +   G   ++  KF    AN S  +FI +++   L     I G  +RFGK  
Sbjct: 66  NLNARLQTIANNGIKNILMLKFDDYLANLSGNKFISELI--NLGASGFIVGKNYRFGKMG 123

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           + D   L++       +T  ID  R  ++  +S++ ++  L  G        L   + IE
Sbjct: 124 SWDAKRLKEVFN----NTHIIDFYRIEQNIKLSTTLLKNYLLFGQFEQLNKYLSSNYLIE 179

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQ-DQTSYSGVANF 244
                                    I    GVY I F  Q  +  Y G+ + 
Sbjct: 180 ISCNEEFYFIWDENV----------IKPNSGVYIIYFVDQKGKQKYPGILHI 221


>gi|225709040|gb|ACO10366.1| Riboflavin kinase [Caligus rogercresseyi]
 gi|225710196|gb|ACO10944.1| Riboflavin kinase [Caligus rogercresseyi]
 gi|225711450|gb|ACO11571.1| Riboflavin kinase [Caligus rogercresseyi]
          Length = 153

 Score = 88.3 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 11/137 (8%)

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDI---LLKE---GVYAIRFRTQDQTSYSG 240
           +   +   +I G   G   LG PTAN   S ++   L  E   G+Y    +   +     
Sbjct: 8   FPIALSGKIIKGFGRGSKELGIPTAN--FSEEVVASLPAELSTGIYFGWAQIDAELPEKM 65

Query: 241 VANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           VA+ G NP    N    +E+ I  ++S ++Y +   V    Y+R E  +K ++ L   + 
Sbjct: 66  VASIGWNP-FYKNEKKTVETHILKEYSGDLYDRSLRVLISGYIREERDYKSLDDLIKDIQ 124

Query: 300 EDEKKARKILESSYPLS 316
            D   A++ LE    LS
Sbjct: 125 GDIAFAKEQLERDSELS 141


>gi|159466268|ref|XP_001691331.1| riboflavin kinase [Chlamydomonas reinhardtii]
 gi|158279303|gb|EDP05064.1| riboflavin kinase [Chlamydomonas reinhardtii]
          Length = 421

 Score = 87.9 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQD-QTSYS 239
           +     +  +V+ G   G   LG PTAN+  +     L E   G+YA   R       + 
Sbjct: 257 MDRVVRLRGEVVKGFGRGSKELGIPTANVCPAAVAKHLAEAVTGIYAGWARVGQRPEIHK 316

Query: 240 GVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N    LE +I  DF Q  YG+  ++    Y+RPE  F  +E L   +
Sbjct: 317 TVLSIGWNP-FFANKEKTLEPWILADFDQPFYGETLSLVICGYVRPEANFSSLEDLVARI 375

Query: 299 GEDEKKARKILE 310
             D   +R  L+
Sbjct: 376 HADADVSRAALD 387


>gi|304373325|ref|YP_003856534.1| Riboflavin biosynthesis protein [Mycoplasma hyorhinis HUB-1]
 gi|304309516|gb|ADM21996.1| Riboflavin biosynthesis protein [Mycoplasma hyorhinis HUB-1]
          Length = 290

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 94/243 (38%), Gaps = 25/243 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   ++  ++ +           +G+F+  H+GH  ++++A ++++ + +  +  NP   
Sbjct: 1   MTKIYSYPLDSNF--KFNNATFVLGSFESFHIGHQKLIQKAKELSD-TVVVCMIKNP--- 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            I    S  F  S    +   L       ++   F  E  N +   FI  ++       +
Sbjct: 55  -IKLPKSNGFVFSDLESRIYALANQDIKNILLIDFNEEIQNMTGNNFIDSLINS--GASS 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGHV 179
            + G  F+FG+    +  IL++  +    +T  I+ ++++ +   +S+  ++  L  G +
Sbjct: 112 FVIGKDFKFGRFGQWNASILKEYFQ----NTHIIEHIKDSQQGIKISTKFLKENLNFGEI 167

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSY 238
                LL   + I+  +   +K                   L  G+Y   F   QD   Y
Sbjct: 168 SLLNSLLTENYKIKVTLDSEKKFHW----------PDEIEKLHTGIYIANFLSIQDSEKY 217

Query: 239 SGV 241
            G+
Sbjct: 218 HGI 220


>gi|158514197|sp|A4QQ05|RIFK_MAGO7 RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
          Length = 200

 Score = 86.8 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 23/147 (15%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-----DILLKEGVYAIRFRTQ------ 233
             + + +E  VI G   G   LG PTAN+ +          +  GVY      Q      
Sbjct: 17  SPFPYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHP 76

Query: 234 ---------DQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLR 283
                        +  V + G  P    N     E  I   F+ + Y     +    ++R
Sbjct: 77  ESPASSSCSPYVVFPMVMSIGYTP-FYNNTERSAEVHILHKFTADFYDAPMRLLILGFIR 135

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILE 310
            E  +  +E L   +  D   AR  L+
Sbjct: 136 DEKNYDSLEALVKDINTDCDVARTSLD 162


>gi|54020335|ref|YP_115616.1| hypothetical protein mhp102 [Mycoplasma hyopneumoniae 232]
 gi|53987508|gb|AAV27709.1| riboflavin biosynthesis protein [Mycoplasma hyopneumoniae 232]
          Length = 281

 Score = 86.4 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            LK  V  +G F+  HLGH  +L+ A +I +     V+     P  +    +     S  
Sbjct: 13  DLKKPVFVLGGFEAFHLGHLKLLKIAAEINDEIVFMVI---KDPSKL--PKNTKENFSDL 67

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + 
Sbjct: 68  NARIQMMANSGVKNIILFDFNAELQQLSGEKFVEIFL--KLQVDFFVVGKNFAFGKNASW 125

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ+   +    T  I+ L++ + + +S+ N++  L  G   N    L   F I   
Sbjct: 126 NPEQLQEFFPR----TKIIEHLKDGQ-KKISTKNLKLFLEFGDFENLNKFLATNFLISLK 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +   ++                 I    G Y       +
Sbjct: 181 IDANKEFVWD----------KNLICPPAGFYLAYLVVVN 209


>gi|322711037|gb|EFZ02611.1| Riboflavin kinase [Metarhizium anisopliae ARSEF 23]
          Length = 189

 Score = 86.4 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 29/153 (18%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVY---AIRFRTQDQT 236
             Y + +E  VI G   G   LG PTAN+ +   +         GVY   A         
Sbjct: 18  APYPYKMEGKVISGFGRGSKELGIPTANLPVDSALTPWISSIPSGVYFGYASLNLPAGHP 77

Query: 237 S------------------YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVS 277
                              Y  V + G NP    N     E  +   F+ + Y     + 
Sbjct: 78  QRPASSSSSSSPGPASFSVYPMVMSIGYNP-FYKNTVRSAEVHVLHGFTADFYDAHMRLL 136

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              ++R E  +K +E L   +  D + A+  L 
Sbjct: 137 ILGFIREEKDYKSLEALIDDINFDCEVAKSSLA 169


>gi|145615850|ref|XP_370135.2| hypothetical protein MGG_11073 [Magnaporthe oryzae 70-15]
 gi|145023067|gb|EDK06674.1| hypothetical protein MGG_11073 [Magnaporthe oryzae 70-15]
          Length = 178

 Score = 86.0 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 46/141 (32%), Gaps = 23/141 (16%)

Query: 192 IESDVIHGEKIGRT-LGFPTANMQLSP-----DILLKEGVYAIRFRTQ------------ 233
           +E  VI G   G   LG PTAN+ +          +  GVY      Q            
Sbjct: 1   MEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESPASS 60

Query: 234 ---DQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFK 289
                  +  V + G  P    N     E  I   F+ + Y     +    ++R E  + 
Sbjct: 61  SCSPYVVFPMVMSIGYTP-FYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKNYD 119

Query: 290 DIEKLKIYMGEDEKKARKILE 310
            +E L   +  D   AR  L+
Sbjct: 120 SLEALVKDINTDCDVARTSLD 140


>gi|10178276|emb|CAC08334.1| putative protein [Arabidopsis thaliana]
          Length = 508

 Score = 85.6 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 101/264 (38%), Gaps = 46/264 (17%)

Query: 2   HVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT------ 51
           + F   E +  LP    + + GG+VA+G FD +H+GH  +  QA +I     ++      
Sbjct: 227 NCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELTIQASRIGAPYLLSFVGMAE 286

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSI-QEKILEKMGFSALIRYKFTLETANYSAEQFIQK 110
           VL + P    + +        S  S   ++  E+         +F     + +  QF++K
Sbjct: 287 VLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEE------YEIEF-ASVRHLTPRQFVEK 339

Query: 111 VLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRN----------- 159
           +  E L V  V+           +GD   L +  E+ G     I+ + +           
Sbjct: 340 LSKE-LRVCGVVAA---------SGDASELVRLCEECGITACIINSVMDMKQGSAKRDSG 389

Query: 160 --NKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK-IGRTLGFPTANMQLS 216
                  VSS+ +R AL  G +   + LLG    +   V   +    R +  P +++   
Sbjct: 390 DSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPSERMISVPRSSIL-- 447

Query: 217 PDILLKEGVY-AIRFRTQDQTSYS 239
            ++    G+Y A      D++S  
Sbjct: 448 -NLPPGIGIYKACLLLVGDESSVP 470


>gi|310794778|gb|EFQ30239.1| riboflavin kinase [Glomerella graminicola M1.001]
          Length = 205

 Score = 85.6 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 49/156 (31%), Gaps = 32/156 (20%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFR-------- 231
             +   +E  VI G   G   LG PTAN+ +           K GVY             
Sbjct: 19  APFPLKMEGKVISGFGRGSKELGIPTANLPVDASQTPWIDTAKSGVYFGWASLSLPASHP 78

Query: 232 ----------------TQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRC 274
                             +   Y  V + G NP    N     E  +   F+ + Y    
Sbjct: 79  DRVAPPPSSGSGPAQPHLEFQLYPMVMSIGYNP-FYKNTVRSAEVHVLHKFAADFYDAHM 137

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +    ++R E  +K +E L   +  D   AR  L+
Sbjct: 138 RLLILGFVREEKDYKSLEALVADINTDCDVARASLD 173


>gi|330723798|gb|AEC46168.1| hypothetical protein SRH_03130 [Mycoplasma hyorhinis MCLD]
          Length = 290

 Score = 85.6 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 95/243 (39%), Gaps = 25/243 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   ++  ++ +           +G+F+  H+GH  ++++A ++++ + +  +  NP   
Sbjct: 1   MTKIYSYPLDSNF--KFNNATFVLGSFESFHIGHQKLIQKAKELSD-TVVVCMIKNP--- 54

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            I    S  F  S    +   L       ++   F  E  N +   FI  ++       +
Sbjct: 55  -IKLPKSNGFVFSDLDSRIYALANQEIKNILLIDFNEEIQNMTGNNFIDSLINS--GASS 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGHV 179
            + G  F+FG+    +  IL++  +    +T  I+ ++++ +   +S+  ++  L  G +
Sbjct: 112 FVIGKDFKFGRFGQWNASILKEYFQ----NTHIIEHIKDSQQGIKISTKFLKENLNFGEI 167

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFR-TQDQTSY 238
                LL   + I+  +   +K                   L  G+Y   F  T+D   Y
Sbjct: 168 SLLNSLLTENYKIKVTLDSEKKFQW----------PDEIEKLHTGIYIANFLSTKDSEKY 217

Query: 239 SGV 241
            G+
Sbjct: 218 HGI 220


>gi|72080617|ref|YP_287675.1| hypothetical protein MHP7448_0278 [Mycoplasma hyopneumoniae 7448]
 gi|71913741|gb|AAZ53652.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 281

 Score = 85.2 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            LK  V  +G F+  HLGH  +L+ A +I++     V+     P  +    +     S  
Sbjct: 13  DLKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVI---KDPSKL--PKNTKENFSDL 67

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + 
Sbjct: 68  NARIQMMANSGVKNIILFDFNTELQQLSGEKFVEIFL--KLQVDFFVVGKNFAFGKNASW 125

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ+   +    T  I+ L++ + + +S+ N++  L  G   N    L   F I   
Sbjct: 126 NPEQLQEFFPR----TKIIEHLKDGQ-KKISTKNLKLFLEFGDFENLNKFLATNFLISLK 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +    +                 I    G Y       +
Sbjct: 181 IDANNEFVWD----------KNLICPPAGFYLAYLVVVN 209


>gi|270009727|gb|EFA06175.1| hypothetical protein TcasGA2_TC009022 [Tribolium castaneum]
          Length = 135

 Score = 85.2 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
           G     +  V+        +G       L  +     GVY    + ++   Y  V + G 
Sbjct: 5   GLPHFAQGKVVKANFDEDVVG------NLPEETEP--GVYFGFAQIENGPIYKMVMSVGW 56

Query: 247 NPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
           NP    N    +E++I   F ++ YG+   V    YLR E  FK +E L   +  D  +A
Sbjct: 57  NP-FYKNTKKSMETYIIHKFDEDFYGKILKVVMLGYLRSEKDFKSVEDLIQAINNDVLEA 115

Query: 306 RKILESSY 313
           +  L+   
Sbjct: 116 QTKLDEEQ 123


>gi|281202355|gb|EFA76560.1| hypothetical protein PPL_10329 [Polysphondylium pallidum PN500]
          Length = 196

 Score = 85.2 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 11/140 (7%)

Query: 183 AHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD----ILLKEGVYAIRFRTQDQTS 237
             L      +   VI G   G   LG PTAN+           +  GV+      +   S
Sbjct: 11  EDLSMLPLFLRGKVIKGFGRGSKDLGCPTANLPTESYEATIKDIPIGVFFGWANVKGIDS 70

Query: 238 ----YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               +  V + G NP    N    LE  I + + ++ YG++       ++RP   FK +E
Sbjct: 71  ESVIHKMVMSVGWNP-FYKNEKKTLEIHILNRYDRDFYGEQVNAIATGFIRPMCDFKSLE 129

Query: 293 KLKIYMGEDEKKARKILESS 312
            L   + +D   A + L+++
Sbjct: 130 GLIKAINDDISYASEQLDTA 149


>gi|320588629|gb|EFX01097.1| riboflavin kinase [Grosmannia clavigera kw1407]
          Length = 195

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 54/163 (33%), Gaps = 34/163 (20%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFRTQD 234
            A     Y   +E  VI G   G   LG PTANM +           + GVY    +  +
Sbjct: 12  EAGPEPPYPVRMEGPVIKGFGRGSKELGIPTANMPVDDKAAPWIADCESGVYFGWAKLGE 71

Query: 235 Q------------------------TSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQ-E 268
                                      Y  V + G NP    N     E  I  DF+  +
Sbjct: 72  VPAEATAGAVAAAAVSSPSTTTSPAGLYPMVMSIGFNP-FYNNTSRTAEVHILHDFAGVD 130

Query: 269 IYGQRCTVSFFDYLRPEI-KFKDIEKLKIYMGEDEKKARKILE 310
            YG    ++   Y+RPE   +  +E L   +  D   AR+ L 
Sbjct: 131 FYGAPLRIAILGYIRPERGDYASVEALVEDIHFDCDVARRSLA 173


>gi|238809837|dbj|BAH69627.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 299

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 99/245 (40%), Gaps = 24/245 (9%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI----ANNSPITVLSFNPHPRTIIQS 65
             ++P   K  +  IG+F+  HLGH+ +LE+A ++         I ++ F       I++
Sbjct: 17  FDNIPKFQKP-IFIIGSFESFHLGHYKLLEKARELAKESEKERDIVLVYFED-----IEN 70

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            S    L     + ++     +  +  I   F  + ++ SA+ FI K++    +    + 
Sbjct: 71  LSKTKNLIFSDAKNRVQEFANLKINFAISL-FYSQISHLSAQDFIDKLIANQDDYSF-VI 128

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G +F+FG  R+G+   L+    K        + +R    Q +S+S ++  +  G +    
Sbjct: 129 GEEFKFGFKRSGNVQFLENHYNK--DKVFAQEVVRLKNKQKISTSYLKELIEFGDIDLLN 186

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV-A 242
            +  + ++          I   +      + +     L++G+YA+     +   Y+ +  
Sbjct: 187 TINMFPYSFS---AKFSTIENKIELKKHELLIP----LRQGIYAVLVELNNYNYYALMQV 239

Query: 243 NFGRN 247
           NF   
Sbjct: 240 NFDTK 244


>gi|308189860|ref|YP_003922791.1| riboflavin kinase [Mycoplasma fermentans JER]
 gi|319777053|ref|YP_004136704.1| riboflavin biosynthesis protein [Mycoplasma fermentans M64]
 gi|307624602|gb|ADN68907.1| riboflavin kinase [Mycoplasma fermentans JER]
 gi|318038128|gb|ADV34327.1| Riboflavin biosynthesis protein [Mycoplasma fermentans M64]
          Length = 290

 Score = 84.1 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 99/245 (40%), Gaps = 24/245 (9%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI----ANNSPITVLSFNPHPRTIIQS 65
             ++P   K  +  IG+F+  HLGH+ +LE+A ++         I ++ F       I++
Sbjct: 8   FDNIPKFQKP-IFIIGSFESFHLGHYKLLEKARELAKESEKERDIVLVYFED-----IEN 61

Query: 66  SSPIFTLSPPSIQEKI--LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
            S    L     + ++     +  +  I   F  + ++ SA+ FI K++    +    + 
Sbjct: 62  LSKTKNLIFSDAKNRVQEFANLKINFAISL-FYSQISHLSAQDFIDKLIANQDDYSF-VI 119

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           G +F+FG  R+G+   L+    K        + +R    Q +S+S ++  +  G +    
Sbjct: 120 GEEFKFGFKRSGNVQFLENHYNK--DKVFAQEVVRLKNKQKISTSYLKELIEFGDIDLLN 177

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGV-A 242
            +  + ++          I   +      + +     L++G+YA+     +   Y+ +  
Sbjct: 178 TINMFPYSFS---AKFSTIENKIELKKHELLIP----LRQGIYAVLVELNNYNYYALMQV 230

Query: 243 NFGRN 247
           NF   
Sbjct: 231 NFDTK 235


>gi|71893626|ref|YP_279072.1| hypothetical protein MHJ_0270 [Mycoplasma hyopneumoniae J]
          Length = 281

 Score = 83.3 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            LK  V  +G F+  HLGH  +L+ A +I++     V+     P  +    +     S  
Sbjct: 16  DLKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVI---KDPSKL--PKNTKENFSDL 70

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   +I + F  E      E+F++  L   L+V   + G  F FGK+ + 
Sbjct: 71  NARIQMMANSGVKNIILFDFNTELQQLRGEKFVEIFL--KLQVDFFVVGKNFAFGKNASW 128

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ+   +    T  I+ L++ + + +S+ N++  L  G   N    L   F I   
Sbjct: 129 NPEQLQEFFPR----TKIIEHLKDGQ-KKISTKNLKLFLEFGDFENLNKFLATNFLISLK 183

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +   ++                 I    G Y       +
Sbjct: 184 IDANKEFVWD----------KNLICPPAGFYLAYLVVVN 212


>gi|144227547|gb|AAZ44361.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 278

 Score = 83.3 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            LK  V  +G F+  HLGH  +L+ A +I++     V+     P  +    +     S  
Sbjct: 13  DLKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMVI---KDPSKL--PKNTKENFSDL 67

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   +I + F  E      E+F++  L   L+V   + G  F FGK+ + 
Sbjct: 68  NARIQMMANSGVKNIILFDFNTELQQLRGEKFVEIFL--KLQVDFFVVGKNFAFGKNASW 125

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ+   +    T  I+ L++ + + +S+ N++  L  G   N    L   F I   
Sbjct: 126 NPEQLQEFFPR----TKIIEHLKDGQ-KKISTKNLKLFLEFGDFENLNKFLATNFLISLK 180

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +   ++                 I    G Y       +
Sbjct: 181 IDANKEFVWD----------KNLICPPAGFYLAYLVVVN 209


>gi|254473660|ref|ZP_05087056.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
 gi|211957372|gb|EEA92576.1| riboflavin kinase/FMN adenylyltransferase protein [Pseudovibrio sp.
           JE062]
          Length = 65

 Score = 83.3 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 262 IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
           +FDFS  +Y +  TV F  ++RPE+KF  I+ L   M +D  +AR ++ S  PLS  D++
Sbjct: 1   MFDFSGNLYEKLVTVCFIGFIRPELKFDGIDGLIAQMDQDSAEARAMIASMRPLSHLDQM 60

Query: 322 I 322
           +
Sbjct: 61  L 61


>gi|241958432|ref|XP_002421935.1| flavin mononucleotide kinase, putative; riboflavin kinase
           precursor, putative [Candida dubliniensis CD36]
 gi|223645280|emb|CAX39936.1| flavin mononucleotide kinase, putative [Candida dubliniensis CD36]
          Length = 176

 Score = 83.3 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 32/145 (22%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT------------------------- 232
             +    LG PTAN+ ++ ++  L+ G+Y    +                          
Sbjct: 23  FGRGSSELGIPTANIPINTELNKLEPGIYYGWCKLIPLTAQCDEIKKRVDGKDVLFNHGN 82

Query: 233 ----QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIK 287
               +++  +  V + G NP    N     E  I   F +  YG +       Y+RPE+ 
Sbjct: 83  ELTNEEKDIFPMVMSIGWNP-YYHNKDKTAEVHIIHKFHENFYGSKIEYVVLGYIRPELN 141

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  I++L   +  D + A+  L+S 
Sbjct: 142 FNSIDELIDTINSDIEYAKSKLKSD 166


>gi|154292620|ref|XP_001546881.1| hypothetical protein BC1G_14636 [Botryotinia fuckeliana B05.10]
 gi|150845850|gb|EDN21043.1| hypothetical protein BC1G_14636 [Botryotinia fuckeliana B05.10]
          Length = 191

 Score = 82.9 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 61/169 (36%), Gaps = 32/169 (18%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQL---SPDILLKEGVY---------AIRFRT 232
             Y   +E +V+ G   G   LG PTAN+ +           GVY         A     
Sbjct: 19  SPYPLRMEGEVVSGFGRGSKELGIPTANIPVTNVPWIDTAPSGVYFGHAALDLPASHPEL 78

Query: 233 QDQTS----------------YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCT 275
           Q  +S                Y  V + G NP    N     E  +   FSQ+ YG    
Sbjct: 79  QTPSSSSPSPSSSSSSPTTRLYPMVMSIGYNP-FYRNTVRSAEVHLLHKFSQDFYGSHMR 137

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE-SSYPLSERDRIIC 323
           V    Y+RPE+ + D E L   +  D + AR  L   ++ + + D  + 
Sbjct: 138 VEILGYIRPELDYVDKESLVRDIETDIEVARASLARENWGVEKSDAWLA 186


>gi|312601252|gb|ADQ90507.1| Riboflavin biosynthesis protein [Mycoplasma hyopneumoniae 168]
          Length = 273

 Score = 82.9 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
            LK  V  +G F+  HLGH  +L+ A +I++     ++     P  +    +     S  
Sbjct: 5   DLKKPVFVLGGFEAFHLGHLKLLKIAAEISDEIVFMLI---KDPSKL--PKNTKENFSDL 59

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + +++   G   +I + F  E    S E+F++  L   L+V   + G  F FGK+ + 
Sbjct: 60  NARIQMMANSGVKNIILFDFNTELQQLSGEKFVEIFL--KLQVDFFVVGKNFAFGKNASW 117

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
           +   LQ+   +    T  I+ L++ + + +S+ N++  L  G   N    L   F I   
Sbjct: 118 NPEQLQEFFPR----TKIIEHLKDGQ-KKISTKNLKLFLEFGDFENLNKFLATNFLISLK 172

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQD 234
           +    +                 I    G Y       +
Sbjct: 173 IDANNEFVWD----------KNLICPPAGFYLAYLVVVN 201


>gi|115717793|ref|XP_789693.2| PREDICTED: similar to Riboflavin kinase [Strongylocentrotus
           purpuratus]
 gi|115925714|ref|XP_001197409.1| PREDICTED: similar to Riboflavin kinase [Strongylocentrotus
           purpuratus]
          Length = 130

 Score = 82.9 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
           GVY       D   +  V + G NP    N    +E+ +   F  + Y     V    + 
Sbjct: 24  GVYYGWACVDDGEVHKMVMSIGWNP-YYKNEKKSMETHVMHIFKDDFYDSILKVCILGFR 82

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDR 320
           RPE  +  ++ L   + ED   A   L     L   D 
Sbjct: 83  RPEKNYPSLDSLIAAIKEDIADADMKLSQPDALKYIDD 120


>gi|255722017|ref|XP_002545943.1| riboflavin kinase [Candida tropicalis MYA-3404]
 gi|240136432|gb|EER35985.1| riboflavin kinase [Candida tropicalis MYA-3404]
          Length = 174

 Score = 82.5 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 32/145 (22%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT------------------------- 232
             +    LG PTAN+ ++ ++  L  G+Y    +                          
Sbjct: 23  FGRGSSELGIPTANVPINEELNKLSTGIYYGWCKLIPLTSQCDEIKKRIDGKEVLFNHGN 82

Query: 233 ----QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIK 287
               ++   +  V + G NP    N     E  I   F++  YG +       Y+RPE+ 
Sbjct: 83  NLTNEEIKVFPMVMSIGWNP-YYHNKDKTAEVHIIHKFNKNFYGSKIEYVVLGYIRPELN 141

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  +++L   + +D K A+  LE+ 
Sbjct: 142 FNSVDELIQTINDDIKYAKDKLEND 166


>gi|302918116|ref|XP_003052589.1| hypothetical protein NECHADRAFT_99626 [Nectria haematococca mpVI
           77-13-4]
 gi|256733529|gb|EEU46876.1| hypothetical protein NECHADRAFT_99626 [Nectria haematococca mpVI
           77-13-4]
          Length = 210

 Score = 82.5 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 42/183 (22%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVY-------- 226
           +A     Y   +E +VI G   G   LG PTAN+ +   +         GVY        
Sbjct: 11  DAGPDAPYPLHMEGNVISGFGRGSKELGIPTANLPVDAALTPWIADMPSGVYFGYASLAL 70

Query: 227 ---------AIRFRTQD-----------------QTSYSGVANFGRNPTMVPNGPLLLES 260
                    A   +                       +  V + G NP    N     E 
Sbjct: 71  PSTHPDHPDATTSKDAPSSNEAALLASAPQSNPPFHIFPMVMSIGYNP-FYKNTVRSAEV 129

Query: 261 FIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
            +   F+ + Y     +    ++R E  +K ++ L   +  D + A+  L     +  + 
Sbjct: 130 HVLHKFTADFYDVPMRLLILGFIREEKDYKSLDALIEDINFDCEVAKNSLAREGWVPSKG 189

Query: 320 RII 322
           R+I
Sbjct: 190 RVI 192


>gi|68481815|ref|XP_715149.1| hypothetical protein CaO19.4373 [Candida albicans SC5314]
 gi|68481918|ref|XP_715098.1| hypothetical protein CaO19.11851 [Candida albicans SC5314]
 gi|46436706|gb|EAK96064.1| hypothetical protein CaO19.11851 [Candida albicans SC5314]
 gi|46436759|gb|EAK96116.1| hypothetical protein CaO19.4373 [Candida albicans SC5314]
 gi|238879835|gb|EEQ43473.1| riboflavin kinase [Candida albicans WO-1]
          Length = 176

 Score = 82.1 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 32/145 (22%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT------------------------- 232
             +    LG PTAN+ ++ ++  L+ G+Y    +                          
Sbjct: 23  FGRGSSELGIPTANIPINTELNKLEPGIYYGWCKLIPLTAQCDEIKKRVDGKDVLFNHGN 82

Query: 233 ----QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIK 287
               +++  +  V + G NP    N     E  I   F +  YG +       Y+RPE+ 
Sbjct: 83  ELTNEERDIFPMVMSIGWNP-YYHNKDKTAEVHIIHKFQKNFYGSKIEYVVLGYIRPELN 141

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           F  I++L   +  D + A+  L+S 
Sbjct: 142 FDSIDELIDTINSDIEFAKSKLKSD 166


>gi|71894574|ref|YP_278682.1| hypothetical protein MS53_0563 [Mycoplasma synoviae 53]
 gi|71851362|gb|AAZ43971.1| riboflavin kinase / FMN adenylyltransferase [Mycoplasma synoviae
           53]
          Length = 278

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 24/216 (11%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           IG F+  HLGH  + ++ +  +      +++FN      +   +  F     S +     
Sbjct: 22  IGAFEAFHLGHFQLYKKLLNNSGRK--VIVTFNN---ENLYKDANYFFQDNHS-KYLNFA 75

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           K+    ++   F  +  N S + FI K+    L  K VI G  FRFGK+       L   
Sbjct: 76  KLNIDCVVELDF-QDIKNQSGQDFINKLT-NNLPAK-VIVGKDFRFGKNAKYKASDLSLI 132

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
                   V I E     +  +S+S ++  +  G +     LL Y +     +       
Sbjct: 133 NPNLQ---VEILEFYKFNNSKISTSELKQLVEFGDIKLLNSLLVYNYNFSGTLNID---- 185

Query: 204 RTLGFPTANMQLSPDILLKE-GVYAIRFRTQDQTSY 238
                  A+++L+P++     G+Y  +F  ++   Y
Sbjct: 186 -------ASVELNPNLTPLHSGIYLAKFVIKNFLYY 214


>gi|158517787|sp|P0C5D9|RIFK_CHAGB RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
          Length = 235

 Score = 81.4 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 47/173 (27%), Gaps = 50/173 (28%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFR--------- 231
            Y F +   VI G   G   LG PTAN+ +             GVY              
Sbjct: 21  PYPFRMSGLVISGFGRGSKELGIPTANLPVDDAQTPWISSIPSGVYFGWASLNLPASHPD 80

Query: 232 ---------------------------------TQDQTSYSGVANFGRNPTMVPNGPLLL 258
                                                  Y  V + G NP    N     
Sbjct: 81  SLTSSAAAAAAAAAAAAAPGEDGGGAGEQRQRGGNGFAVYPMVMSIGYNP-FYKNTVRSA 139

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  +   F  + YG    +    ++R E  +  +E L   +  D + A++ L 
Sbjct: 140 EVHVLHRFGADFYGVEMRLLIAGFIREEKDYSGLEALIADIEFDCEVAKRSLA 192


>gi|116202529|ref|XP_001227076.1| hypothetical protein CHGG_09149 [Chaetomium globosum CBS 148.51]
 gi|88177667|gb|EAQ85135.1| hypothetical protein CHGG_09149 [Chaetomium globosum CBS 148.51]
          Length = 456

 Score = 81.4 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 47/173 (27%), Gaps = 50/173 (28%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFR--------- 231
            Y F +   VI G   G   LG PTAN+ +             GVY              
Sbjct: 242 PYPFRMSGLVISGFGRGSKELGIPTANLPVDDAQTPWISSIPSGVYFGWASLNLPASHPD 301

Query: 232 ---------------------------------TQDQTSYSGVANFGRNPTMVPNGPLLL 258
                                                  Y  V + G NP    N     
Sbjct: 302 SLTSSAAAAAAAAAAAAAPGEDGGGAGEQRQRGGNGFAVYPMVMSIGYNP-FYKNTVRSA 360

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           E  +   F  + YG    +    ++R E  +  +E L   +  D + A++ L 
Sbjct: 361 EVHVLHRFGADFYGVEMRLLIAGFIREEKDYSGLEALIADIEFDCEVAKRSLA 413


>gi|328767247|gb|EGF77297.1| hypothetical protein BATDEDRAFT_14177 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 170

 Score = 81.0 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 54/147 (36%), Gaps = 17/147 (11%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANM----QLSPDILLKEGVYAIRFRTQDQTS--- 237
             Y   +   V  G   G   LG PTAN+      +   LL+ G+Y          S   
Sbjct: 14  SPYPVQLSGIVSKGFGRGGKQLGIPTANLPENVAQTAGELLETGIYYGWACVGHDASSAV 73

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKD------ 290
              V +FG NP    N     E  I  +F ++ YG    V    Y+RPE  +        
Sbjct: 74  LPMVMSFGWNP-FYKNEKRSAEVHIIHEFPKDFYGADLRVIVAGYIRPEQNYTSLGNDVC 132

Query: 291 -IEKLKIYMGEDEKKARKILESSYPLS 316
            ++ L   +  D K A + L+    L+
Sbjct: 133 KLDALIQDINTDIKVAIQSLQRPAYLA 159


>gi|164655311|ref|XP_001728786.1| hypothetical protein MGL_4121 [Malassezia globosa CBS 7966]
 gi|159102670|gb|EDP41572.1| hypothetical protein MGL_4121 [Malassezia globosa CBS 7966]
          Length = 172

 Score = 80.6 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 26/154 (16%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE------ 223
           R  +       A     +   +   V HG   G   L   TAN+ +S             
Sbjct: 3   RPMICGEDTPKA----PFPVYLRGTVEHGYGRGSKQLNCATANLPISALDDPVNDPQHRL 58

Query: 224 ---GVYAIRFRT----------QDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEI 269
              GVY    +            D+  Y  V + G NP    N    +E  I  +++ + 
Sbjct: 59  HETGVYFGYAQVRFRDGAPHVAADREIYPMVMSLGWNPQFQ-NQQKSIEVHILHNYAADF 117

Query: 270 YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           YG+   V    Y+RPE K+ ++E L   +  D++
Sbjct: 118 YGEDMHVVVLGYIRPERKYANLEALMDDINIDKR 151


>gi|46128499|ref|XP_388803.1| hypothetical protein FG08627.1 [Gibberella zeae PH-1]
          Length = 211

 Score = 80.6 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 55/185 (29%), Gaps = 43/185 (23%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL-----KEGVYAIRFRTQ- 233
           +A     Y   +E  VI G   G   LG PTAN+ +   +         GVY        
Sbjct: 11  DAGPEAPYPLHMEGKVISGFGRGSKELGIPTANLPVDEAMTPWISDMASGVYFGYASLAL 70

Query: 234 ----------------------------------DQTSYSGVANFGRNPTMVPNGPLLLE 259
                                                 +  V + G NP    N     E
Sbjct: 71  PSEHPDAPSSASSNAAPQSGTEDALLSAEAPANPPFHIFPMVMSIGYNP-FYKNEVRSAE 129

Query: 260 SFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
             +   F+ + Y     +    ++R E  +K +E L   +  D + A+  L       E+
Sbjct: 130 VHVLHKFTADFYDVPMRLLILGFIREEKDYKSLEALIEDINFDCEVAKNSLAREAWAPEK 189

Query: 319 DRIIC 323
            R+I 
Sbjct: 190 GRVIS 194


>gi|74611259|sp|Q6M923|RIFK_NEUCR RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|40882315|emb|CAF06137.1| conserved hypothetical protein [Neurospora crassa]
          Length = 210

 Score = 80.6 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 40/164 (24%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPD----ILLKEGVY-------------- 226
             + F +E +VI G   G   LG PTAN+ +  +      +  G+Y              
Sbjct: 21  APFPFRMEGEVISGFGRGSKELGIPTANLPVDDENAWIKNIDSGIYFGWASLKLPASHPN 80

Query: 227 -------------------AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS 266
                               +   T     Y  V + G NP    N     E  +  +F+
Sbjct: 81  SVLYQKPPTSEPVMMDPEKLVDQETGQWQIYPMVMSIGYNP-FYKNTVRSAEVHVLGEFA 139

Query: 267 QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            + YG    +    ++R E  +  +E L   +  D + AR  L 
Sbjct: 140 ADFYGVGMRLLITGFIRNEKDYSGLEALIADIHFDCEVARHSLA 183


>gi|224007683|ref|XP_002292801.1| riboflavin kinase/FAD synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220971663|gb|EED89997.1| riboflavin kinase/FAD synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 171

 Score = 80.6 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 27/145 (18%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL----------LKEGVYAIRFRTQDQTS 237
              I S V+ G   G   LG PTAN+     +           L  G+Y    R      
Sbjct: 6   PIRIVSRVVRGFGRGSKDLGIPTANVSREEGVYSCSSSGGFDALPTGIYWGFARIFLGRV 65

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIF---------------DFSQEIYGQRCTVSFFDYL 282
           +    + G NPT   N    +E  +                   Q+ Y ++  +S   YL
Sbjct: 66  HKAAISVGFNPTYN-NKQKTVEPHLIAEYGHPQRHASSTKETLFQDFYDRQIVLSLVGYL 124

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARK 307
           RPE+ F+ +EKL   + +D + A +
Sbjct: 125 RPELPFEGLEKLTAAIKKDIEDAER 149


>gi|302796173|ref|XP_002979849.1| hypothetical protein SELMODRAFT_233432 [Selaginella moellendorffii]
 gi|300152609|gb|EFJ19251.1| hypothetical protein SELMODRAFT_233432 [Selaginella moellendorffii]
          Length = 333

 Score = 79.8 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMV-----PNGPLLLESFIFDFSQEIYGQRCTVSF 278
           G+Y    R  D+  +  V + G NP              L   + +F ++ YG+   +  
Sbjct: 231 GIYLGWARLSDKGVFKMVMSVGWNPYFDNAEKNSGKEPWL---LHEFPEDFYGEELRLVV 287

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             Y+RPE  F  +E L   + ED + A+  L+
Sbjct: 288 VGYIRPEANFSSLEDLINKIHEDGRIAKAALD 319


>gi|307109427|gb|EFN57665.1| hypothetical protein CHLNCDRAFT_30316 [Chlorella variabilis]
          Length = 401

 Score = 79.4 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLKE---GVYAIRFRTQD-QTSYSGVAN 243
             I+  V+ G   G   LG PTAN+       +L E   G++A           Y    +
Sbjct: 253 VRIKGTVVKGFGRGSKQLGIPTANVDPDSLRTVLAEAVTGIFAGWAAVGHSPKLYKTACS 312

Query: 244 FGRNPTMVPNGPLLLESFIF-DFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
            G NP +  N     E ++  DF   +  G    +    Y+RPE  F  ++ L   + +D
Sbjct: 313 IGFNP-VFGNQSKTCEPWLLHDFGGEDFCGSEIRLIICAYIRPEANFPSLQALIDRIHKD 371

Query: 302 EKKARKILE 310
                + LE
Sbjct: 372 AAVTEEALE 380


>gi|170575447|ref|XP_001893247.1| riboflavin kinase [Brugia malayi]
 gi|158600869|gb|EDP37926.1| riboflavin kinase, putative [Brugia malayi]
          Length = 155

 Score = 78.7 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKE----GVYAIRFRTQDQTSYSGVA 242
           Y +     V+ G   G R LG PTANM  +  + L      GV+           Y  V 
Sbjct: 33  YPYYFRGIVVVGFGRGGRKLGCPTANMDDNVILCLPPHFPCGVFYGFANVNRGEVYGMVT 92

Query: 243 NFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           + G NP    N    +E  I  DF ++ YG         +LRP + F  +
Sbjct: 93  SIGWNPHF-KNERKTIEVHILHDFQEDFYGAEVRAVLVGFLRPMVAFNSL 141


>gi|157060610|gb|ABV03311.1| RibF [Chlamydia trachomatis]
          Length = 96

 Score = 78.7 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 161 KSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
           +  IVSS  IR  L K  + +A   LG  F+    V HG  IG + G+ T N+ L+  +L
Sbjct: 6   EGTIVSSRKIRQFLRKKDLCSAEKFLGRPFSYTGKVAHGRGIGASFGYATINLPLTHSLL 65

Query: 221 LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPN 253
              GVY      +   SY+GV N G  PTM  +
Sbjct: 66  PL-GVYTCTIVIEGF-SYAGVMNLGMAPTMQRH 96


>gi|19075895|ref|NP_588395.1| riboflavin kinase Fmn1 [Schizosaccharomyces pombe 972h-]
 gi|51701726|sp|O74866|RIFK_SCHPO RecName: Full=Riboflavin kinase; AltName: Full=ATP:riboflavin
           5'-phosphotransferase; AltName: Full=Flavin
           mononucleotide kinase 1; AltName: Full=Flavokinase
 gi|28948694|pdb|1N05|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948695|pdb|1N06|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948696|pdb|1N06|B Chain B, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948697|pdb|1N07|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948698|pdb|1N07|B Chain B, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948699|pdb|1N08|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|28948700|pdb|1N08|B Chain B, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin
           Kinase Reveals A Novel Atp And Riboflavin Binding Fold
 gi|3766378|emb|CAA21430.1| riboflavin kinase Fmn1 [Schizosaccharomyces pombe]
          Length = 163

 Score = 78.3 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP-DILLK---EGVYAIRFRTQDQTSYSG 240
             Y    E  V+HG   G   LG PTAN+       LL+    GVY      Q +  +  
Sbjct: 20  SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQ-KRVFPM 78

Query: 241 VANFGRNPTMVPNGPLLLESFIFDFSQ-EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           V + G NP    N     E  + +    + Y +   V    Y+RPE+ +  ++KL   + 
Sbjct: 79  VMSVGWNP-YYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIH 137

Query: 300 EDEKKA 305
            D + A
Sbjct: 138 TDIRVA 143


>gi|170088136|ref|XP_001875291.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650491|gb|EDR14732.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 189

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 8/123 (6%)

Query: 194 SDVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYAIRFRTQDQTSYSGVANFGRNP 248
             V  G   G   LG PTAN+       +    K GVY    + +D      V + G NP
Sbjct: 47  GQVQKGFGRGGKDLGCPTANLPDESITPISSVAKTGVYYGYAQ-EDIQVLPMVMSLGWNP 105

Query: 249 TMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK 307
               N  L  E   + DF  + YG         Y+RPE+ +   E L   +  D++ A  
Sbjct: 106 -FYKNKCLTAEIHVMHDFKTDFYGFEMRALVLGYIRPELDYTSREALIEDIEVDKRVALN 164

Query: 308 ILE 310
            LE
Sbjct: 165 CLE 167


>gi|167525527|ref|XP_001747098.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774393|gb|EDQ88022.1| predicted protein [Monosiga brevicollis MX1]
          Length = 140

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 17/118 (14%)

Query: 190 FTIESDVIHGEKIGRT-LGFPTANMQL--------SPDI---LLKE---GVYAIRFRTQD 234
            T+E +V+ G   G   LG PTA + L          D+   L      G+Y    +   
Sbjct: 7   VTLEGEVVRGFGRGSKELGIPTARLHLCFVWTANFPEDVVESLPTNMEQGIYYGWSQVGS 66

Query: 235 QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDI 291
              Y+ V + G NP    N     E  I + F  + YG+   +    Y+RPE+ F  +
Sbjct: 67  GPVYAAVMSVGWNP-FYKNEKRSAEVHIMNKFDSDFYGETMRMLVLGYIRPELNFSSL 123


>gi|299115578|emb|CBN75781.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 470

 Score = 76.7 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 50/158 (31%), Gaps = 29/158 (18%)

Query: 183 AHLLGYRFTIESDVIHGEKI-GRTLGFPTANMQ----LSPDILLKEGVYAIRFRTQD--- 234
               G    +   V  G     + LG PTAN+           L  GVY      +    
Sbjct: 266 HRASGRVRYLRGTVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGAAN 325

Query: 235 ------------------QTSYSGVANFGRNPTM--VPNGPLLLESFIFDFSQ-EIYGQR 273
                             +  +  VAN G +PT     N   ++E  +  +   + YG+ 
Sbjct: 326 KEGEGGKGDASGGGGDGGEGLWKCVANVGYSPTFAGQENAEKIVEGHLIGYEGEDFYGRT 385

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
             +    + R E KF    +L   + +D   A   L+ 
Sbjct: 386 MRMLLAGFQRREKKFASFPELVATINKDVGDAAMALDE 423


>gi|169769446|ref|XP_001819193.1| riboflavin kinase [Aspergillus oryzae RIB40]
 gi|238501916|ref|XP_002382192.1| Riboflavin kinase, putative [Aspergillus flavus NRRL3357]
 gi|121804487|sp|Q2UMM4|RIFK_ASPOR RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|83767051|dbj|BAE57191.1| unnamed protein product [Aspergillus oryzae]
 gi|220692429|gb|EED48776.1| Riboflavin kinase, putative [Aspergillus flavus NRRL3357]
          Length = 198

 Score = 76.7 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 30/159 (18%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFR------TQDQT 236
            +   +   VI G   G   LG PTAN+    LS    L+ GVY           T + T
Sbjct: 20  PFPIKLSGPVIKGFGRGSKELGIPTANIPPDGLSDYPDLQVGVYYGVVALDPSRFTSETT 79

Query: 237 SYSGVANFGRNPTMVPNGPLLLESFI-------------------FDFSQEIYGQRCTVS 277
               V + G NP    N    +E  I                   F+   + YG +  + 
Sbjct: 80  ILPAVLSIGYNP-FYKNTTRSVEIHIMPPLSSPSPTANGEAGQVKFNKLPDFYGTKLNLL 138

Query: 278 FFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLS 316
              Y+RPE  +  +E L   +  D + AR+ L+    +S
Sbjct: 139 ILGYIRPEYDYVSLEALVEDIRIDCEVARQSLQRKAYVS 177


>gi|110736161|dbj|BAF00052.1| hypothetical protein [Arabidopsis thaliana]
          Length = 234

 Score = 76.7 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 25/166 (15%)

Query: 93  YKFTLETAN---YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
            +F +E A+    + +QF++K+  E L V  V+ G  +RFG   +GD   L +  + +G 
Sbjct: 35  VEFEIEFASVRHLNPQQFVEKLSRE-LRVCGVVAGENYRFGYRASGDASELVRLCKDFGI 93

Query: 150 HTVFIDELRNNKSQ---------------IVSSSNIRTALTKGHVLNAAHLLGYRFTIES 194
               I+ + +                    VSS+ +R AL  G V     LLG    + S
Sbjct: 94  SAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTELLGRPHRVIS 153

Query: 195 DVIHGEKIGR--TLGFPTANMQLSPDILLKEGVY-AIRFRTQDQTS 237
                +   +   +   T+++    ++    GVY A      D+  
Sbjct: 154 RTRTQDLTSKRGRISLQTSSLL---NLPPGNGVYKACSLIVGDKHP 196


>gi|294155455|ref|YP_003559839.1| riboflavin kinase [Mycoplasma crocodyli MP145]
 gi|291600517|gb|ADE20013.1| riboflavin kinase [Mycoplasma crocodyli MP145]
          Length = 286

 Score = 76.4 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 112/292 (38%), Gaps = 33/292 (11%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V  +G+F+ +HLGH+ + +       N    ++ FN        ++      S    +
Sbjct: 22  NTVFVLGSFESLHLGHYELFKHTFNNYPNHNKVIVFFNNDSNMAKFNNEFF---SDQKTR 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT-GTKFRFGKDRAGDR 137
              + ++GF A I   FT     +SA++FI+K+       K++   G  F+FG +     
Sbjct: 79  LNQISQIGFDAGIALDFTK-VKQFSAQEFIEKIAQGQ---KSIFIAGEDFKFGHNALSTV 134

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
            ++      Y   ++ I   + N S+ +S+S ++  +  G +      L + ++I +++ 
Sbjct: 135 DLINTFNNNY--KSISIPVFKINNSK-LSTSKLKDHIEFGDIAILNSYLLFDYSINTNLK 191

Query: 198 HGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLL 257
           H  ++                  L  G+YA+R    +  SY G+ +              
Sbjct: 192 HNLELEIC----------QNIKKLHSGIYAVRVDFNNF-SYFGILHV------SLEKVYK 234

Query: 258 LESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           LE   F ++  I      VS    +R  +K  +   L   +  D   A+   
Sbjct: 235 LEFIDFKYT-NIEPIEIEVSLKKLIRIIVKKDN--DLI--LENDLIIAKTFF 281


>gi|328862978|gb|EGG12078.1| hypothetical protein MELLADRAFT_102002 [Melampsora larici-populina
           98AG31]
          Length = 170

 Score = 75.6 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)

Query: 184 HLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           +L  Y   + S+V+ G   G   L  PTAN+      +L++     +   ++Q  +  V 
Sbjct: 35  NLSIYPICLSSNVLKGFGRGSKELNCPTANLNPK---VLED---QSKEYLRNQNVFEMVM 88

Query: 243 NFGRNPTMVPNGPLLLESFI-FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
           + G NP +  N    +E  + F+F Q+ YG    V    Y+RPE  +   ++L   +  D
Sbjct: 89  SIGFNP-VYGNEFKTIEVHVLFEFDQDFYGVEMKVMVLGYIRPEYNYTTKDELITDIEID 147

Query: 302 EKKARKILES 311
           ++ A+  L+ 
Sbjct: 148 KQVAKNTLKQ 157


>gi|149239166|ref|XP_001525459.1| riboflavin kinase [Lodderomyces elongisporus NRRL YB-4239]
 gi|158514327|sp|A5E1A0|RIFK_LODEL RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|146450952|gb|EDK45208.1| riboflavin kinase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 182

 Score = 75.6 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 32/145 (22%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRTQ------------------------ 233
             +    LG PTAN+ ++  +  L  G+Y    +                          
Sbjct: 28  FGRGSSELGIPTANIPINAQLNSLPTGIYYGWCKIHPVSDQNDETRTRPDGQLILFNHGN 87

Query: 234 -----DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIK 287
                +   +  V + G NP    N     E  I   F ++ YG         Y+RPE+ 
Sbjct: 88  KLQANELVVHPMVMSIGWNP-FYQNKEKAAEIHIMSKFERDFYGAELEFIVLGYVRPELD 146

Query: 288 FKDIEKLKIYMGEDEKKARKILESS 312
           +   E L   +  D + +R ILE+ 
Sbjct: 147 YTTKEALIEDILTDIRISRDILENK 171


>gi|322495562|emb|CBZ30867.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 183

 Score = 75.6 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 25/148 (16%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL--LKE---------G-VYAIRFRTQ 233
              + +   VIHG   G T LG+PTAN++LS  ++  LK          G V A    T 
Sbjct: 1   MKPWFLRGRVIHGFGRGGTQLGYPTANLELSETVIEFLKSHNNLVLWGWGCVEAAEPNTG 60

Query: 234 DQ----------TSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
           +             +  V + G NP    N  +  E      F  + YG+   +   + +
Sbjct: 61  EARAEDASPAPLGPFPFVMSIGNNPQF-KNVDVSAEVHFLHKFDGDFYGRVVRIITLERI 119

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           R +  F  +E+L   +  D   A + L+
Sbjct: 120 RSQSAFTTLEELIKTIDGDVVFAEEHLK 147


>gi|71020513|ref|XP_760487.1| hypothetical protein UM04340.1 [Ustilago maydis 521]
 gi|46100382|gb|EAK85615.1| hypothetical protein UM04340.1 [Ustilago maydis 521]
          Length = 417

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEI 286
           +  + +D   Y  V + G NP    N     E  I  DF+ + YG    V    Y+RPE 
Sbjct: 186 VHLQHEDTQVYPMVMSVGWNP-FYKNTHKTAEVHILHDFADDFYGLEIRVVVLGYVRPEY 244

Query: 287 KFKDIEKLKIYMGEDEK 303
            +  ++ L   +  D++
Sbjct: 245 NYDSLDALIEDIEMDKR 261


>gi|156060313|ref|XP_001596079.1| hypothetical protein SS1G_02295 [Sclerotinia sclerotiorum 1980]
 gi|154699703|gb|EDN99441.1| hypothetical protein SS1G_02295 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 206

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 53/159 (33%), Gaps = 37/159 (23%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQL---SPDILLKEGVYAIRFRTQ--------- 233
            Y   ++ +V+ G   G   LG PTAN+ +           GVY                
Sbjct: 20  PYPLRMQGEVVSGFGRGSKELGIPTANIPVTNVPWIDTAPSGVYFGYAALDLPSTHPDLE 79

Query: 234 ----------------------DQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIY 270
                                     Y  V + G NP    N     E  +   F+Q+ Y
Sbjct: 80  NSPLPPSPTNPSSTSPSPSPPQTTRLYPMVMSIGYNP-FYRNSVRSAEVHLLHTFTQDFY 138

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           G +  V    Y+RPE+ + D E L   +  D + AR+ L
Sbjct: 139 GSQMRVKILGYIRPELDYVDRESLVRDIEMDIEVARRSL 177


>gi|218509038|ref|ZP_03506916.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Rhizobium
          etli Brasil 5]
          Length = 52

 Score = 74.8 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI 50
          M VFH  E    LP HL+GGV+AIGNFDG+H GH  +L +A++IA    I
Sbjct: 1  MTVFHRNETRDPLPAHLRGGVIAIGNFDGVHRGHQSVLNRALEIARARGI 50


>gi|72548725|ref|XP_843421.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           major strain Friedlin]
 gi|323363938|emb|CBZ12944.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           major strain Friedlin]
          Length = 183

 Score = 74.8 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 25/148 (16%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQL-----------SPDILLKEG-VYAIRFRTQ 233
              + +   VIHG   G T LG+PTAN++L              +L   G V A    T 
Sbjct: 1   MRPWFLRGRVIHGFGRGGTQLGYPTANLELSEAAIDFLKPYDNFVLWGWGCVEAAEPNTW 60

Query: 234 DQ----------TSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
           +             +  V + G NP    N  +  E      F  + YG+   +   + +
Sbjct: 61  EAHAEDASHAPLGPFPFVMSIGNNPQF-KNVDVSAEVHFLHKFDGDFYGRVVRIITLERI 119

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           R +  F  +E+L   +  D   A + L+
Sbjct: 120 RSQSAFTTLEELIRTIDCDVVFAEEHLK 147


>gi|332028094|gb|EGI68145.1| Riboflavin kinase [Acromyrmex echinatior]
          Length = 91

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 241 VANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMG 299
           V + G NP    N    +E  +   F +++YG+   +    Y+RPE  F  +++L   + 
Sbjct: 2   VVSIGWNP-YYKNEKKSMEVHLLHKFQRDLYGEELKIIISGYIRPEKDFSSLDELVTEIK 60

Query: 300 EDEKKARKILES 311
            D   A + LE 
Sbjct: 61  NDIAIAERQLEE 72


>gi|45185121|ref|NP_982838.1| ABL109Wp [Ashbya gossypii ATCC 10895]
 gi|44980757|gb|AAS50662.1| ABL109Wp [Ashbya gossypii ATCC 10895]
          Length = 222

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 39/167 (23%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL------KEGVYAIRFRTQDQTSYSG---- 240
                V    +    LG PTAN+ +  + L         GVY    R +           
Sbjct: 59  EYVDIVAGFGRGSAELGIPTANVPI--EQLPSEVNEMATGVYFGWARLRPNMDQEAQVHH 116

Query: 241 -------------------------VANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRC 274
                                    V + G NP    N    +E  I  DF ++ YG + 
Sbjct: 117 RNDGSEVIYNFGSKLSETERGVFPIVLSVGWNP-FYNNSKKTVELHILNDFEEDFYGAKI 175

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
             SF  Y+RPE+ +   E L   +  D K A ++L +    S ++++
Sbjct: 176 KFSFLGYIRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQL 222


>gi|85085950|ref|XP_957609.1| hypothetical protein NCU03970 [Neurospora crassa OR74A]
 gi|28918702|gb|EAA28373.1| hypothetical protein NCU03970 [Neurospora crassa OR74A]
          Length = 237

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 228 IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEI 286
           +   T     Y  V + G NP    N     E  +  +F+ + YG    +    ++R E 
Sbjct: 128 VDQETGQWQIYPMVMSIGYNP-FYKNTVRSAEVHVLGEFAADFYGVGMRLLITGFIRNEK 186

Query: 287 KFKDIEKLKIYMGEDEKKARKILE 310
            +  +E L   +  D + AR  L 
Sbjct: 187 DYSGLEALIADIHFDCEVARHSLA 210


>gi|289614345|emb|CBI58855.1| unnamed protein product [Sordaria macrospora]
          Length = 240

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKF 288
            +T     Y  V + G NP    N     E  +  +F  + YG    +    ++R E  +
Sbjct: 132 QQTGQWQIYPMVMSIGYNP-FYKNTVRSAEVHVLENFGADFYGVEMRLLVTGFIRNEKDY 190

Query: 289 KDIEKLKIYMGEDEKKARKILE 310
             +E L   +  D + AR  L 
Sbjct: 191 SGLEALIADIEFDCEVARHSLA 212


>gi|169618291|ref|XP_001802559.1| hypothetical protein SNOG_12337 [Phaeosphaeria nodorum SN15]
 gi|111059030|gb|EAT80150.1| hypothetical protein SNOG_12337 [Phaeosphaeria nodorum SN15]
          Length = 225

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 60/187 (32%), Gaps = 52/187 (27%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYAIRFRTQD------ 234
            +   +   VI G   G   LG PTAN+ L    +     L  G+Y              
Sbjct: 20  PFPLRLRGPVIKGFGRGSKELGIPTANIPLEGLSIGGHDDLDSGIYYGWCTLDHSSIAAQ 79

Query: 235 -------------------------------------QTSYSGVANFGRNPTMVPNGPLL 257
                                                 T Y  V + G NP    N    
Sbjct: 80  TTTTSVPSATEDTSPPSRSSNHAVADLEYTSAPAPSSTTIYPTVLSIGFNP-YYKNTQRS 138

Query: 258 LESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE-SSYPL 315
           +E  I  +F  + YG   ++    ++RPE  +  +E L   +  D + A+K LE  +Y  
Sbjct: 139 IEIHILANFPADFYGATLSLVILGFIRPEYDYVSVEALVEDIRTDIRVAQKSLEREAYQS 198

Query: 316 SERDRII 322
            +RD  +
Sbjct: 199 WKRDEWL 205


>gi|158564051|sp|Q75DY2|RIFK_ASHGO RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
          Length = 186

 Score = 73.7 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 39/167 (23%)

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILL------KEGVYAIRFRTQDQTSYSG---- 240
                V    +    LG PTAN+ +  + L         GVY    R +           
Sbjct: 23  EYVDIVAGFGRGSAELGIPTANVPI--EQLPSEVNEMATGVYFGWARLRPNMDQEAQVHH 80

Query: 241 -------------------------VANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRC 274
                                    V + G NP    N    +E  I  DF ++ YG + 
Sbjct: 81  RNDGSEVIYNFGSKLSETERGVFPIVLSVGWNP-FYNNSKKTVELHILNDFEEDFYGAKI 139

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
             SF  Y+RPE+ +   E L   +  D K A ++L +    S ++++
Sbjct: 140 KFSFLGYIRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQL 186


>gi|50305843|ref|XP_452882.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74606774|sp|Q6CT57|RIFK_KLULA RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|49642015|emb|CAH01733.1| KLLA0C15213p [Kluyveromyces lactis]
          Length = 185

 Score = 73.3 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 39/148 (26%)

Query: 199 GEKIGRTLGFPTANMQLSPDILLK------EGVYAIRFRT-------------------- 232
             +    LG PTAN+ +    L K       GVY    +                     
Sbjct: 30  FGRGSAELGIPTANVPIDD--LPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGREVQ 87

Query: 233 ---------QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
                    +D      V + G NP    N    +E  I   FS   YG +   +F  Y+
Sbjct: 88  YNNGTLLNDEDLAVLPVVLSVGWNP-FYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGYI 146

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           RPE+ +   + L   +  D + A++ L+
Sbjct: 147 RPELDYTTKDALIADIHTDIEIAKEKLQ 174


>gi|84999092|ref|XP_954267.1| riboflavin kinase / fad synthase family protein [Theileria
           annulata]
 gi|65305265|emb|CAI73590.1| riboflavin kinase / fad synthase family protein, putative
           [Theileria annulata]
          Length = 455

 Score = 72.9 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 12/143 (8%)

Query: 185 LLGYRFTIESDVIHGEKIGR-TLGFPTANMQLS--PDILLKE---GVYAIRFRTQD---- 234
           LL  +  I  +V  G   G   LG PTAN++ +  P ++      GVY            
Sbjct: 313 LLKNKVKIVGEVFKGSGRGFPLLGIPTANLKCNSLPHLITGNNILGVYIGYGYINGSKEV 372

Query: 235 --QTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
              T  + + + G NP        +   F   F++ + G    +  + YLR + K+  +E
Sbjct: 373 SEDTRINAIVSIGFNPHFYGENYSVEPYFYHKFNESLLGLTVRLDIYGYLRTDSKYSSLE 432

Query: 293 KLKIYMGEDEKKARKILESSYPL 315
            L   +  D    + IL S+  +
Sbjct: 433 DLVQAIQSDLHFNKLILTSTNNV 455


>gi|150866948|ref|XP_001386718.2| Riboflavin kinase (Flavin mononucleotide kinase 1) [Scheffersomyces
           stipitis CBS 6054]
 gi|158513682|sp|A3M0C9|RIFK_PICST RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|149388204|gb|ABN68689.2| Riboflavin kinase (Flavin mononucleotide kinase 1) [Scheffersomyces
           stipitis CBS 6054]
          Length = 178

 Score = 72.5 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 51/154 (33%), Gaps = 31/154 (20%)

Query: 196 VIHGEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT---------------------- 232
           V    +    LG PTAN+ ++ D+  L+ G+Y    +                       
Sbjct: 25  VSGFGRGSSELGIPTANIPINDDLNQLETGIYYGWCQLKPCTLPDECKTRTNGREVIYNH 84

Query: 233 ------QDQTSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPE 285
                  D      V + G NP          E   +  F    YG +   +   Y+RPE
Sbjct: 85  GKNLRNDDLKVLPMVMSIGWNP-FYHLKEKAAEVHIMHKFDDFFYGAQIKFNVLGYIRPE 143

Query: 286 IKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
           + +   E L   +  D K A + L+     + +D
Sbjct: 144 LDYTTKEALIEDINLDIKIALEALDRDAYQTYKD 177


>gi|15829019|ref|NP_326379.1| hypothetical protein MYPU_5480 [Mycoplasma pulmonis UAB CTIP]
 gi|14089963|emb|CAC13721.1| RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF [INCLUDES: RIBOFLAVIN KINASE
           (FLAVOKINASE); FMN ADENYLYLTRANSFERASE (FAD
           PYROPHOSPHORYLASE) (FAD SYNTHETASE)] [Mycoplasma
           pulmonis]
          Length = 279

 Score = 72.5 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 101/260 (38%), Gaps = 27/260 (10%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           IG F+  H+GH  + E+A++ +      V     +P  + ++ +  F     + + + L 
Sbjct: 20  IGAFESFHIGHKKLFEKALEYSEKDFELVFVIVKNPADLPKNKAKNFL--SFNSRIQSLV 77

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                 L+ + F  E ++     FI+K+ VE     ++I G  F+ GK  + +   L+K 
Sbjct: 78  DFNLKKLVVWDFN-EVSSLDGFDFIKKL-VEKTSDFSIIVGEDFKLGKRASVNASDLKKH 135

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIG 203
            +K     V I E+    S+ +++S ++  L  G +     LL   + IE  +       
Sbjct: 136 FQK-----VEIVEIETINSRKIATSLLKEQLEFGEIDFVNLLLIKNYEIEITI----NEK 186

Query: 204 RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF 263
               +P    ++        G+Y   F   DQ +       G     + N    L   I+
Sbjct: 187 MLFDYPQTIQKIHK------GIYFG-FIVIDQKAIPCAIRIG----FLENEVKSL---IY 232

Query: 264 DFSQEIYGQRCTVSFFDYLR 283
           +  + +  +   +     +R
Sbjct: 233 EEIENLKNKAVVLEIVKKIR 252


>gi|146101482|ref|XP_001469126.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           infantum]
 gi|134073495|emb|CAM72226.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           infantum JPCM5]
 gi|322503136|emb|CBZ38220.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 183

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 25/148 (16%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSP---------DILLKEG---VYAIRFRTQ 233
              + +   VIHG   G T LG+PTAN++LS          D L+  G   V A    T 
Sbjct: 1   MRPWFLRGRVIHGFGRGGTQLGYPTANLELSEAAIDFLKPYDNLVLWGWGCVEAAEPNTW 60

Query: 234 DQ----------TSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYL 282
           +             +  V + G NP    N  +  E      F  + Y +   +   + +
Sbjct: 61  EARAEDASPAPLGPFPFVMSIGNNPQF-KNVDVSAEVHFLHKFDGDFYERVVRIITLERI 119

Query: 283 RPEIKFKDIEKLKIYMGEDEKKARKILE 310
           R +  F  +E+L   +  D   A + L+
Sbjct: 120 RSQSAFTTLEELIKTIDGDVVFAEEHLK 147


>gi|313634315|gb|EFS00925.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
          seeligeri FSL N1-067]
          Length = 64

 Score = 72.1 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
          M V H   +        +  V+ IG FDG+H+GH  IL  A+ +   +  +T +SF+PHP
Sbjct: 1  MEVSH---VTLEPNKDSRPAVLTIGKFDGVHIGHQKILNTALSLKKPDEILTAISFSPHP 57

Query: 60 RTIIQS 65
             ++ 
Sbjct: 58 LWALKK 63


>gi|330927098|ref|XP_003301740.1| hypothetical protein PTT_13316 [Pyrenophora teres f. teres 0-1]
 gi|311323290|gb|EFQ90146.1| hypothetical protein PTT_13316 [Pyrenophora teres f. teres 0-1]
          Length = 213

 Score = 72.1 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 55/172 (31%), Gaps = 50/172 (29%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYAIRFRTQ------- 233
            +   +   V+ G   G   LG PTAN+ LS   +     L  G+Y              
Sbjct: 20  PFPIKLRGPVVKGFGRGSKELGIPTANIPLSGLSIGGNDTLSSGIYYGWCTLDTSTISSQ 79

Query: 234 -----------------------------------DQTSYSGVANFGRNPTMVPNGPLLL 258
                                                T Y  V + G NP    N    +
Sbjct: 80  TSASTVPSATSDTSIPERSSSHAVADLEYSSSTPSPSTVYPTVLSIGYNP-YYKNEKRSI 138

Query: 259 ESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  I  +F ++ YG   ++    ++RPE  +   E L   + ED + AR+ L
Sbjct: 139 EIHILHNFDKDFYGAELSLLIMGFIRPEYDYVSKEALVEDIREDIRVARRSL 190


>gi|312216279|emb|CBX96230.1| hypothetical protein [Leptosphaeria maculans]
          Length = 242

 Score = 72.1 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 55/177 (31%), Gaps = 54/177 (30%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYAIRFRTQD------ 234
            +   +   V+ G   G   LG PTAN+ LS   +     L  G+Y              
Sbjct: 20  PFPIKLRGPVVKGFGRGSKELGIPTANIPLSGLSIGGHDNLDSGIYYGWCTLDHRAPPTS 79

Query: 235 ----------------------------------------QTSYSGVANFGRNPTMVPNG 254
                                                   QT Y  V + G NP    N 
Sbjct: 80  PPTSVPSATSDTSPPAPSSSHGVADLNYPSTSLLTTSPSPQTVYPTVLSIGYNP-YYKNT 138

Query: 255 PLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              +E  I   F  + YG   ++    ++RPE  +   E L   + ED + AR+ LE
Sbjct: 139 QRSIEIHILHSFDADFYGAVLSLVVLGFIRPEYDYVSKEALVEDIREDIRVARRSLE 195


>gi|115400725|ref|XP_001215951.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|121736621|sp|Q0CHR1|RIFK_ASPTN RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|114191617|gb|EAU33317.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 205

 Score = 72.1 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 50/156 (32%), Gaps = 33/156 (21%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQ--------- 233
            +   +   VI G   G   LG PTAN+    L+    L+ GVY                
Sbjct: 20  PFPIRLAGPVIKGFGRGSKELGIPTANIPADGLAEYPDLQVGVYYGVVALNPAQSEVPST 79

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFI-------------------FDFSQEIYGQRC 274
                  V + G NP    N    +E  I                   F    + YG   
Sbjct: 80  SAQILPAVLSIGYNP-FYKNTTRSIEIHIMPPLTAPSPTATGTPGHVTFHKLPDFYGTSL 138

Query: 275 TVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            +    Y+RPE  +   E L   +  D + AR+ L+
Sbjct: 139 KLLILGYIRPEYDYVSAEALIEDIRVDCEVARRSLQ 174


>gi|156083022|ref|XP_001608995.1| riboflavin kinase / FAD synthetase domain containing protein
           [Babesia bovis T2Bo]
 gi|154796245|gb|EDO05427.1| riboflavin kinase / FAD synthetase domain containing protein
           [Babesia bovis]
          Length = 503

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIG-RTLGFPTANMQLSPDILLKEGVYAIRFRTQDQ-- 235
           +  A         I+  VI G   G  +LG PTAN+  S    L  GVY    R Q    
Sbjct: 361 LAAAYLRFTVPVIIQGTVIEGFGRGASSLGVPTANLDCSSIPHLVPGVYFGTCRLQGNAE 420

Query: 236 ----TSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKD 290
               T    + + G NP    +    +E +    F+  + GQ   ++    LR E +F  
Sbjct: 421 VDPNTILDTILSVGFNPHF-DHATYSIEPYIYHSFNYPLLGQHLELNIKGLLRTEARFDS 479

Query: 291 IEKLKIYMGEDE 302
           +  L   +  D 
Sbjct: 480 LGHLIAAIQTDI 491


>gi|296410820|ref|XP_002835133.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295627908|emb|CAZ79254.1| unnamed protein product [Tuber melanosporum]
          Length = 192

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 32/148 (21%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYA------------- 227
            +   +   VI G   G   L  PTAN+ +    +     ++ GVY              
Sbjct: 21  PFPLRLSGPVIKGFGRGSKELQIPTANIPIEGLRVGSCETVESGVYYGYAGLDIPATAGN 80

Query: 228 -----------IRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCT 275
                            D   +  V + G NP    N    +E  I   F ++ YG +  
Sbjct: 81  DNDNHGNKKSSTTVAAADGRVFPMVMSIGWNP-FYKNSVRSVEVHIIHTFPEDFYGVQMN 139

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEK 303
           +    ++RPE  +   E L   +  D K
Sbjct: 140 LVILGFIRPEFDYVSKEALIEDIKMDIK 167


>gi|302697001|ref|XP_003038179.1| hypothetical protein SCHCODRAFT_42190 [Schizophyllum commune H4-8]
 gi|300111876|gb|EFJ03277.1| hypothetical protein SCHCODRAFT_42190 [Schizophyllum commune H4-8]
          Length = 161

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 19/136 (13%)

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVY------------AIRF 230
           +   I+  V  G   G   LG PTAN+       L    K GVY            +  +
Sbjct: 18  FPIHIKGPVQRGFGRGGKDLGCPTANLPDESITPLSTVAKPGVYFGYAQVIPPADASSSW 77

Query: 231 RTQDQTSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFK 289
           R +D+       + G NP    N  L  E   + DF  + YG         Y+RPE+ + 
Sbjct: 78  RKEDRQVLPMAMSMGWNP-YYKNEKLTCEIHIMHDFPTDFYGYEMRAVVLGYIRPELDYV 136

Query: 290 DIEKLKIYMGEDEKKA 305
             E L   +  D++ A
Sbjct: 137 SKELLIADIETDKQVA 152


>gi|302407986|ref|XP_003001828.1| riboflavin kinase [Verticillium albo-atrum VaMs.102]
 gi|261359549|gb|EEY21977.1| riboflavin kinase [Verticillium albo-atrum VaMs.102]
          Length = 212

 Score = 71.7 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
           Y  V + G NP    N     E  +   F+ + Y     +    ++R E  +K +E L  
Sbjct: 101 YPMVMSIGYNP-FYKNTVRSAEVHVLHPFAADFYDAHMRLLLLGFVREEKDYKSLEALVE 159

Query: 297 YMGEDEKKARKILESSYPLSERDRII 322
            +  D   AR+ L  S     R+  +
Sbjct: 160 DIRFDCTVARESLRRSAWCPPREDAL 185


>gi|223590141|sp|A5DAH9|RIFK_PICGU RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|190344502|gb|EDK36186.2| hypothetical protein PGUG_00284 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 180

 Score = 71.7 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 31/153 (20%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT------------------------- 232
             +    LG PTAN+ ++ ++  L+ G+Y    R                          
Sbjct: 29  FGRGSAELGIPTANIPVTSELNKLETGIYYGWCRLVPRNQECAAKQRSDGKKVYFNNGTK 88

Query: 233 ---QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKF 288
               +  ++    + G NP    N     E  I   F +  YG     +   ++RPE+ +
Sbjct: 89  LADDELETFPMAMSIGWNP-FYNNETKTAEVHIIHKFRENFYGADLRYAVMGHIRPELNY 147

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
              E L   + +D +  +  L        R +I
Sbjct: 148 TTKEALIADINKDIEITKDALSKPSYEKYRTKI 180


>gi|146421928|ref|XP_001486907.1| hypothetical protein PGUG_00284 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 180

 Score = 71.7 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 31/153 (20%)

Query: 199 GEKIGRTLGFPTANMQLSPDI-LLKEGVYAIRFRT------------------------- 232
             +    LG PTAN+ ++ ++  L+ G+Y    R                          
Sbjct: 29  FGRGSAELGIPTANIPVTSELNKLETGIYYGWCRLVPRNQECAAKQRSDGKKVYFNNGTK 88

Query: 233 ---QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKF 288
               +  ++    + G NP    N     E  I   F +  YG     +   ++RPE+ +
Sbjct: 89  LADDELETFPMAMSIGWNP-FYNNETKTAEVHIIHKFRENFYGADLRYAVMGHIRPELNY 147

Query: 289 KDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
              E L   + +D +  +  L        R +I
Sbjct: 148 TTKEALIADINKDIEITKDALSKPSYEKYRTKI 180


>gi|71656956|ref|XP_817017.1| riboflavin kinase [Trypanosoma cruzi strain CL Brener]
 gi|70882183|gb|EAN95166.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)

Query: 193 ESDVIHGEKIGRT-LGFPTANMQLSPDI---------LLKEG---VYAI-RFRTQDQTSY 238
              VIHG   G T LGFPTAN++L  ++         L+  G   V AI       +  Y
Sbjct: 16  SGTVIHGYGRGGTQLGFPTANLELDDNVRAQLKPYKNLVLFGWGSVIAIPGKENCGEGPY 75

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP       L  E +   +F+++ YG    +     LR    F  +E L   
Sbjct: 76  PFSMSIGYNPHFHGV-DLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALVDA 134

Query: 298 MGEDEKKARKILES 311
           + +D +K  + L+ 
Sbjct: 135 IKDDVRKTEEALQK 148


>gi|258614822|ref|ZP_05712592.1| riboflavin biosynthesis protein RibF [Enterococcus faecium DO]
          Length = 79

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPH 58
          M++       QS        V+ +G FDG+H+GH  +++  ++I       + +++FN H
Sbjct: 1  MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQH 60

Query: 59 PRTIIQSSSP--IFTLSPP 75
          P  + +   P  +  L+  
Sbjct: 61 PSIVFKKIDPSSVKYLTSL 79


>gi|164519581|pdb|3BNW|A Chain A, Crystal Structure Of Riboflavin Kinase From Trypanosoma
           Brucei
 gi|164519582|pdb|3BNW|B Chain B, Crystal Structure Of Riboflavin Kinase From Trypanosoma
           Brucei
          Length = 181

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPDIL-----LKEGVYAIRFRT--------Q 233
             F +   V+HG+  G   LGFPTAN+ L  D++      K  V               +
Sbjct: 16  QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERE 75

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               Y   A+ G N        L +E +   +F  + YG    +     +R    F  ++
Sbjct: 76  SFGPYPFAASIGFNMQF-DEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQ 134

Query: 293 KLKIYMGEDEKKARKILESSY 313
            L   +  D +  R +L+   
Sbjct: 135 ALVDTIKSDVQFTRDMLQKPQ 155


>gi|317027281|ref|XP_001400582.2| riboflavin kinase [Aspergillus niger CBS 513.88]
          Length = 204

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 49/155 (31%), Gaps = 31/155 (20%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE---GVYAIRFRTQ------DQ 235
             Y   +   VI G   G   LG PTAN+         E   GVY              +
Sbjct: 19  SPYPIRMSGPVIKGFGRGSKELGIPTANIPADELSQHPELSVGVYYGVVALDPARFSTGE 78

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFI--------------------FDFSQEIYGQRCT 275
           T    V + G NP    N    +E  I                    F    + YG    
Sbjct: 79  TVLPAVLSIGYNP-FYKNESKSIEIHIMPPLSAPSPTATTSTDGQVTFHKLPDFYGTPLN 137

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    Y+RPE  +   E L   +  D + AR+ L+
Sbjct: 138 LLILGYIRPEYDYISSEALIEDIRVDCEVARRSLQ 172


>gi|158512850|sp|A2QFH1|RIFK_ASPNC RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|134057528|emb|CAK48882.1| unnamed protein product [Aspergillus niger]
          Length = 214

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 49/155 (31%), Gaps = 31/155 (20%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLKE---GVYAIRFRTQ------DQ 235
             Y   +   VI G   G   LG PTAN+         E   GVY              +
Sbjct: 19  SPYPIRMSGPVIKGFGRGSKELGIPTANIPADELSQHPELSVGVYYGVVALDPARFSTGE 78

Query: 236 TSYSGVANFGRNPTMVPNGPLLLESFI--------------------FDFSQEIYGQRCT 275
           T    V + G NP    N    +E  I                    F    + YG    
Sbjct: 79  TVLPAVLSIGYNP-FYKNESKSIEIHIMPPLSAPSPTATTSTDGQVTFHKLPDFYGTPLN 137

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    Y+RPE  +   E L   +  D + AR+ L+
Sbjct: 138 LLILGYIRPEYDYISSEALIEDIRVDCEVARRSLQ 172


>gi|71745712|ref|XP_827486.1| riboflavin kinase [Trypanosoma brucei TREU927]
 gi|70831651|gb|EAN77156.1| riboflavin kinase, putative [Trypanosoma brucei]
 gi|261331690|emb|CBH14684.1| riboflavin kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 173

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 188 YRFTIESDVIHGEKIG-RTLGFPTANMQLSPDIL-----LKEGVYAIRFRT--------Q 233
             F +   V+HG+  G   LGFPTAN+ L  D++      K  V               +
Sbjct: 8   QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERE 67

Query: 234 DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIE 292
               Y   A+ G N        L +E +   +F  + YG    +     +R    F  ++
Sbjct: 68  SFGPYPFAASIGFNMQF-DEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQ 126

Query: 293 KLKIYMGEDEKKARKILESSY 313
            L   +  D +  R +L+   
Sbjct: 127 ALVDTIKSDVQFTRDMLQKPQ 147


>gi|58265304|ref|XP_569808.1| riboflavin kinase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134109051|ref|XP_776640.1| hypothetical protein CNBC1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259320|gb|EAL21993.1| hypothetical protein CNBC1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226040|gb|AAW42501.1| riboflavin kinase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 242

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 209 PTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQ 267
           PT      P+        A R+  +D+  +  V + G NP    N  +  E  I   F  
Sbjct: 117 PTITAPYPPEHH------AQRWSKEDEKVWPMVMSVGWNPYF-KNEKITAEVHIMHPFKA 169

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + YG   ++    Y+RPE+ +   E L   +  D K A   L 
Sbjct: 170 DFYGHHMSIVILGYIRPELDYVSKEALIDDIKTDVKVALNSLA 212


>gi|321254557|ref|XP_003193116.1| riboflavin kinase [Cryptococcus gattii WM276]
 gi|317459585|gb|ADV21329.1| riboflavin kinase, putative [Cryptococcus gattii WM276]
          Length = 242

 Score = 71.0 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 209 PTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQ 267
           PT      P+        A R+  +D+  +  V + G NP    N  +  E  I   F  
Sbjct: 117 PTITAPYPPEHH------AQRWSKEDEKVWPMVMSVGWNPYF-KNEKITAEVHIMHPFKA 169

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           + YG   ++    Y+RPE+ +   + L   +  D K A   L 
Sbjct: 170 DFYGHHMSIVILGYIRPELDYVSKDALIDDIQTDVKVALNSLA 212


>gi|70989723|ref|XP_749711.1| Riboflavin kinase [Aspergillus fumigatus Af293]
 gi|74668939|sp|Q4WHD2|RIFK_ASPFU RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|66847342|gb|EAL87673.1| Riboflavin kinase, putative [Aspergillus fumigatus Af293]
 gi|159129119|gb|EDP54233.1| Riboflavin kinase, putative [Aspergillus fumigatus A1163]
          Length = 214

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 52/167 (31%), Gaps = 44/167 (26%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------------- 228
            Y   +   VI G   G   LG PTAN+    L     L+ GVY                
Sbjct: 20  PYPVRLSGPVIKGFGRGSKELGIPTANIPAEGLEEYPDLQVGVYYGVVALDPAKFQYQEG 79

Query: 229 -------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI------------------F 263
                       +      V + G NP    N    +E  I                  F
Sbjct: 80  QGSTSTSSTGGAEAAVLPAVLSIGYNP-FYKNKTKSIEIHIMPPLSSPSPTADGAGEVKF 138

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               + YG +  +    Y+RPE  +  +E L   +  D + ARK L+
Sbjct: 139 HKLPDFYGTQLKLLILGYIRPEYDYVSLEALIEDIRVDCEVARKSLQ 185


>gi|67900964|ref|XP_680738.1| hypothetical protein AN7469.2 [Aspergillus nidulans FGSC A4]
 gi|74593591|sp|Q5AW61|RIFK_EMENI RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|40742859|gb|EAA62049.1| hypothetical protein AN7469.2 [Aspergillus nidulans FGSC A4]
 gi|259483775|tpe|CBF79442.1| TPA: Riboflavin kinase (EC 2.7.1.26)(Flavin mononucleotide kinase
           1) [Source:UniProtKB/Swiss-Prot;Acc:Q5AW61] [Aspergillus
           nidulans FGSC A4]
          Length = 210

 Score = 70.6 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 56/171 (32%), Gaps = 44/171 (25%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLS--PDILLKE---GVYAIRFRTQDQT--- 236
             +   +   VI G   G   LG PTAN+ +    ++L KE   GVY         T   
Sbjct: 19  APFPIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPA 78

Query: 237 -------------SYSGVANFGRNPTMVPNGPLLLESFI--------------------F 263
                            V + G NP    N    +E  I                    F
Sbjct: 79  PSSSDSTSGDAAPILPAVLSIGYNP-YYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKF 137

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK-ILESSY 313
               + YG +  +    Y+RPE  +  +E L   +  D + AR  +L  +Y
Sbjct: 138 HKLPDFYGTKLNLLMLGYIRPEYDYVSMEALVEDIRIDCEVARASLLRPAY 188


>gi|71662053|ref|XP_818039.1| riboflavin kinase [Trypanosoma cruzi strain CL Brener]
 gi|70883266|gb|EAN96188.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 70.6 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)

Query: 193 ESDVIHGEKIGRT-LGFPTANMQLSPDI---------LLKEG---VYAI-RFRTQDQTSY 238
              VIHG   G T LGFPTAN++L  ++         L+  G   V AI       +  Y
Sbjct: 16  SGKVIHGYGRGGTQLGFPTANLELDDNVRAQLNPYKNLVLFGWGSVIAIPGKENCGEGPY 75

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP       L  E +   +F+++ YG    +     LR    F  +E L   
Sbjct: 76  PFSMSIGYNPHFH-GLDLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALVDA 134

Query: 298 MGEDEKKARKILES 311
           + +D +K  + L+ 
Sbjct: 135 IKDDVRKTEEALQK 148


>gi|189201067|ref|XP_001936870.1| riboflavin kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983969|gb|EDU49457.1| riboflavin kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 213

 Score = 70.2 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 54/172 (31%), Gaps = 50/172 (29%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL-----LKEGVYAIRFRTQ------- 233
            +   +   V+ G   G   LG PTAN+ LS   +     L  G+Y              
Sbjct: 20  PFPIKLRGPVVKGFGRGSKELGIPTANIPLSGLSIGGHDTLDSGIYYGWCTLDTSTIPSQ 79

Query: 234 -----------------------------------DQTSYSGVANFGRNPTMVPNGPLLL 258
                                                T Y  V + G NP    N    +
Sbjct: 80  TSASSVPSATSDTSIPTRSSSHAVADLEYSSSTPTPSTVYPTVLSIGYNP-YYKNEKRSI 138

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           E  I   F ++ YG   ++    ++RPE  +   E L   + ED + AR+ L
Sbjct: 139 EIHILHSFEKDFYGAELSLLIMGFIRPEYDYVSKEALVEDIREDIRVARRSL 190


>gi|221057582|ref|XP_002261299.1| riboflavin kinase / FAD synthase family protein [Plasmodium
           knowlesi strain H]
 gi|194247304|emb|CAQ40704.1| riboflavin kinase / FAD synthase family protein,putative
           [Plasmodium knowlesi strain H]
          Length = 683

 Score = 69.8 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYS 239
           +      I   V+ G   G   L  PTAN+  S     DI+   G+Y    R + +  Y 
Sbjct: 538 IFKKYMYIHGTVVKGFGRGSKYLNIPTANISYSNLTSTDIMP--GIYFGISRLK-RKIYK 594

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N  + +E+F++  +  + Y +   +     LR E  F     L   +
Sbjct: 595 TVVSIGYNP-FFENKHITIEAFLYYKTNTLFYDEDIHLIIVGILRSESNFSYFSHLIQAI 653

Query: 299 GEDEKKARKILE 310
             D + AR IL 
Sbjct: 654 QFDCELARIILS 665


>gi|121715282|ref|XP_001275250.1| Riboflavin kinase, putative [Aspergillus clavatus NRRL 1]
 gi|158512612|sp|A1C603|RIFK_ASPCL RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|119403407|gb|EAW13824.1| Riboflavin kinase, putative [Aspergillus clavatus NRRL 1]
          Length = 214

 Score = 69.8 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 53/169 (31%), Gaps = 46/169 (27%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANM---QLSPDILLKEGVYAI-------------- 228
            Y   +   VI G   G   LG PTAN+   +L+    L+ GVY                
Sbjct: 20  PYPVRLSGPVIKGFGRGSKELGIPTANIPAEELAEHPDLQVGVYYGVVALDPAKFQYHGD 79

Query: 229 ---RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI----------------------- 262
              +           V + G NP    N    +E  I                       
Sbjct: 80  ASRKGEDSQAAILPAVLSIGYNP-FYKNKTRSIEIHIMPPLSSPSPTAEVTTQGQGHGQV 138

Query: 263 -FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            F    + YG +  +    Y+RPE  +  +E L   +  D + AR  L+
Sbjct: 139 KFHKLPDFYGTQLKLLILGYIRPEFDYVSLEALVEDIRVDCEVARASLQ 187


>gi|254577645|ref|XP_002494809.1| ZYRO0A10164p [Zygosaccharomyces rouxii]
 gi|238937698|emb|CAR25876.1| ZYRO0A10164p [Zygosaccharomyces rouxii]
          Length = 189

 Score = 69.8 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 40/149 (26%)

Query: 199 GEKIGRTLGFPTANMQLSPDILLKE------GVYAI------------------------ 228
             +    LG PTAN+ L  + L  E      GVY                          
Sbjct: 31  FGRGSAELGIPTANVPL--EQLPPETQDLELGVYFGYALLKRVNREDTTALRNDGRTVTY 88

Query: 229 ------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDY 281
                 +    D   +  V + G+NP    N    +E  I   F  + YG +   +    
Sbjct: 89  NYGKLLKETNDDLKIHPVVLSVGKNP-FYHNKLKTVELHILHHFQADFYGAQVKFNLLGR 147

Query: 282 LRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +RPE+ +   E L   + +D+  A +IL 
Sbjct: 148 IRPELNYNSKEALIDDINKDKLIASEILS 176


>gi|313638982|gb|EFS03996.1| riboflavin kinase/FMN adenylyltransferase, putative [Listeria
          seeligeri FSL S4-171]
          Length = 60

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN-NSPITVLSFNPHP 59
          M V H   +        +  V+ IG FDG+H+GH  IL  A+ +   +  +T +SF+PHP
Sbjct: 1  MEVAH---VTLEPNEDSRPAVLTIGKFDGVHIGHQKILNTALSLKKPDEILTAISFSPHP 57

Query: 60 R 60
           
Sbjct: 58 L 58


>gi|68074647|ref|XP_679240.1| riboflavin kinase / FAD synthase family protein, [Plasmodium
           berghei strain ANKA]
 gi|56499938|emb|CAI00034.1| riboflavin kinase / FAD synthase family protein, putative
           [Plasmodium berghei]
          Length = 662

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 28/172 (16%)

Query: 159 NNKSQIVSSSNI----------------RTALTKGHVLNAAHLL--GYRFTIESDVIHGE 200
           +NK    SS+NI                R       + +   L        I   V+ G 
Sbjct: 470 DNKLHEHSSTNIPNESPNKSNDVVYPLSRNCNLTEDIYSWRILYIFNKYIYIYGKVVKGF 529

Query: 201 KIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
             G   L  PTAN+  +     DI+   G+Y    + +    Y  V + G NP    N  
Sbjct: 530 GRGSKYLNIPTANIFNANLTEADIMP--GIYFGISKLK-HKIYKTVVSIGYNPYFQ-NKH 585

Query: 256 LLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
           + +E+F++  +  + Y +   +     LR E  F ++  L   +  D + AR
Sbjct: 586 ITIEAFLYYKTNNLFYDENIELIIVGILRSESNFYELSHLIHAIQFDCELAR 637


>gi|322818920|gb|EFZ26195.1| riboflavin kinase, putative [Trypanosoma cruzi]
          Length = 178

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)

Query: 193 ESDVIHGEKIGRT-LGFPTANMQLSPDI---------LLKEG---VYAI-RFRTQDQTSY 238
              VIHG   G T LGFPTAN++L  ++         L+  G   V AI       +  Y
Sbjct: 16  SGKVIHGYGRGGTQLGFPTANLELDDNVRAQLNPYKNLVLFGWGSVIAIPGKENCGEGPY 75

Query: 239 SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
               + G NP       L  E +   +F+++ YG    +     LR    F  +E L   
Sbjct: 76  PFSMSIGYNPHFHGV-DLTAEVYFIHEFAEDFYGAVVNILVLGDLREMGAFVSLEALVYA 134

Query: 298 MGEDEKKARKILES 311
           + +D +K  + L+ 
Sbjct: 135 IKDDVRKTEEALQK 148


>gi|154344943|ref|XP_001568413.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134065750|emb|CAM43524.1| riboflavin kinase/fmn adenylyltransferase-like protein [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 183

 Score = 69.4 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 35/163 (21%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL------------------------- 220
              + +   VIHG   G T LG+PTAN++LS   +                         
Sbjct: 1   MKPWFLRGKVIHGFGRGGTQLGYPTANLELSEPAIDFLKPYDNFVFWGWGCVEAAAPSTE 60

Query: 221 -LKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSF 278
             + G             +  V + G NP    N  +  E      F  + YG    +  
Sbjct: 61  EPRNG----DLSLAPLGPFPFVMSVGNNPQF-KNVDVSAEVHFLHKFDGDFYGCVVRILT 115

Query: 279 FDYLRPEIKFKDIEKLKIYMGEDEKKARKILE--SSYPLSERD 319
            + +R +  F  +E+L   +  D   A + L+     P  + D
Sbjct: 116 LEAIRSQSAFTTLEELIKSIDGDVMFAGEHLKMPEWAPYEQHD 158


>gi|50545725|ref|XP_500401.1| YALI0B01826p [Yarrowia lipolytica]
 gi|74635789|sp|Q6CG11|RIFK_YARLI RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|49646267|emb|CAG82619.1| YALI0B01826p [Yarrowia lipolytica]
          Length = 192

 Score = 69.4 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 199 GEKIGRTLGFPTANMQLSP---DILLKEGVYAI-------------------RFRTQDQT 236
             +    LG PTAN+ +        L  G+Y                     + R  D  
Sbjct: 36  YGRGSADLGIPTANIPIDDVPVLDALDTGIYYGLVQILKTDKPSEKKTSEFQKDRVVDFQ 95

Query: 237 S------------YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLR 283
                           V + G NP    N     E  I   F+   YG    V    YLR
Sbjct: 96  YTNKLNDQEINAVLPMVMSVGWNP-FYKNDQKSAEIHIIHKFAHTFYGASIKVMVLGYLR 154

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSY 313
           PE  F  +E L   +  D K + + +E + 
Sbjct: 155 PEKNFTSLEALVDEIHNDIKVSEEKMEGTR 184


>gi|156101363|ref|XP_001616375.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148805249|gb|EDL46648.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 680

 Score = 69.4 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYS 239
           +      I   V+ G   G   L  PTAN+  S     DI+   G+Y    + + +  Y 
Sbjct: 535 IFKKYMYIHGTVVKGFGRGSKYLNIPTANISYSNLTSTDIMP--GIYFGISKLK-KKIYK 591

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N  + +E+F++  +  + Y +   +     LR E  F     L   +
Sbjct: 592 TVVSIGYNP-FFENKHITIEAFLYYKTNTLFYDEDIHLIIVGILRSESNFSYFSHLIHAI 650

Query: 299 GEDEKKARKILES 311
             D + AR IL  
Sbjct: 651 QFDCELARIILSK 663


>gi|119480351|ref|XP_001260204.1| Riboflavin kinase, putative [Neosartorya fischeri NRRL 181]
 gi|158512653|sp|A1DG00|RIFK_NEOFI RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
 gi|119408358|gb|EAW18307.1| Riboflavin kinase, putative [Neosartorya fischeri NRRL 181]
          Length = 218

 Score = 69.0 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 52/171 (30%), Gaps = 48/171 (28%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQDQTS----- 237
            Y   +   VI G   G   LG PTAN+    L+    L+ GVY                
Sbjct: 20  PYPVRLSGPVIKGFGRGSKELGIPTANIPAEGLAEYPDLQVGVYYGVVALDPAKFQYQED 79

Query: 238 --------------------YSGVANFGRNPTMVPNGPLLLESFI--------------- 262
                                  V + G NP    N    +E  I               
Sbjct: 80  QGEGSTSSTGGAGAGAGAAILPAVLSIGYNP-FYKNKTKSIEIHIMPPLSSPSPTAEGAG 138

Query: 263 ---FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
              F    + YG +  +    Y+RPE  +  +E L   +  D + ARK L+
Sbjct: 139 EVKFHKLPDFYGTQLKLLILGYIRPEYDYVSLEALIEDIRVDCEVARKSLQ 189


>gi|76156772|gb|AAX27907.2| SJCHGC04098 protein [Schistosoma japonicum]
          Length = 198

 Score = 69.0 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 42/126 (33%), Gaps = 21/126 (16%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL------------------KEGVY 226
            G  F     V+HG   G   LG PT  + +  +                     K G+Y
Sbjct: 24  NGALFYAAGKVVHGFGRGSKQLGIPTGLLYVIINFFPAYIANLEEFIVDQIPDSVKNGIY 83

Query: 227 AIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPE 285
               +  +   Y  V + G NP    N    +E  I   F +  YG    +    + RPE
Sbjct: 84  FGWAKLNNTPVYKMVMSIGWNPYF-KNAKRSMEVHILHHFEENFYGDTIKLIAVKFSRPE 142

Query: 286 IKFKDI 291
           + F  I
Sbjct: 143 LDFPSI 148


>gi|320581204|gb|EFW95425.1| Riboflavin kinase [Pichia angusta DL-1]
          Length = 182

 Score = 69.0 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 53/175 (30%), Gaps = 36/175 (20%)

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKE---GVYAIRFRTQ--- 233
                         S V    +    +G PTAN+ +  +  L++   GVY    R     
Sbjct: 8   ATVQAPFPLVIHNTSVVAGFGRGSAEMGIPTANVPVDNEPELQKLDTGVYFGFVRLLRPE 67

Query: 234 ----------------------------DQTSYSGVANFGRNPTMVPNGPLLLESFIF-D 264
                                       D      V + G NP    N     E  I  +
Sbjct: 68  QTPQKKTVPRSDGKTEVEFTYGANLADSDFEVLPMVMSLGWNP-FFKNSKKACELHILHE 126

Query: 265 FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERD 319
           F    YG R   +   Y+RPE+ +  +E L   +  D + ARK L +       D
Sbjct: 127 FKSTFYGCRLNFNILGYVRPELDYVSMEALIKDIQLDIETARKYLATPEYAKYAD 181


>gi|255948208|ref|XP_002564871.1| Pc22g08590 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591888|emb|CAP98147.1| Pc22g08590 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 255

 Score = 69.0 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 55/167 (32%), Gaps = 42/167 (25%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSY--- 238
            Y   +   VI G   G   LG PTAN+           L  GVY       D T+Y   
Sbjct: 20  PYPVRLSGPVIKGFGRGSKDLGIPTANIPADDLSEKHPELTTGVYYG-VVALDPTTYQHE 78

Query: 239 ------------SGVANFGRNPTMVPNGPLLLESFI-------------------FDFSQ 267
                         V + G NP    N    +E  I                   F+   
Sbjct: 79  TSEGSTSTAVVLPAVLSIGYNP-FYKNTVRSVEIHIMPALTEPSPTAAGQEGQTKFNRLP 137

Query: 268 EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARK-ILESSY 313
           + Y  +  +    Y+RPE  +  +E L   +  D + AR+ +L  +Y
Sbjct: 138 DFYKTKLNLLILGYIRPEFDYVSLEALVEDIRVDCEVARESLLREAY 184


>gi|297271113|ref|XP_002800205.1| PREDICTED: riboflavin kinase-like [Macaca mulatta]
          Length = 168

 Score = 68.7 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSE 317
           E+ I   F ++ YG+   V+   YLRPE  F  +E L   +  D ++A+K L+    L  
Sbjct: 92  ETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKQLDLPEHLKV 151

Query: 318 RDR 320
           ++ 
Sbjct: 152 KED 154


>gi|83315057|ref|XP_730630.1| Riboflavin kinase/FAD synthetase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23490408|gb|EAA22195.1| Riboflavin kinase / FAD synthetase, putative [Plasmodium yoelii
           yoelii]
          Length = 710

 Score = 68.7 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYS 239
           +      I   V+ G   G   L  PTAN+  +     DI+   G+Y    + +    Y 
Sbjct: 562 IFNKYIYIYGKVVKGFGRGSKYLNIPTANIFNANLTEADIMP--GIYFGISKLK-HKIYK 618

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N  + +E+F++  +  + Y +   +     LR E  F ++  L   +
Sbjct: 619 TVVSIGYNPYFQ-NKHITIEAFLYYKTNNLFYDENIELIIVGILRSESNFYELSHLIHAI 677

Query: 299 GEDEKKAR 306
             D + AR
Sbjct: 678 QFDCELAR 685


>gi|328353928|emb|CCA40325.1| hypothetical protein PP7435_Chr4-0150 [Pichia pastoris CBS 7435]
          Length = 188

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 35/150 (23%)

Query: 206 LGFPTANM---QLSPDILLKEGVYAIRFRTQD---------------------------- 234
           +G PTAN+    LS    L  GVY    +                               
Sbjct: 36  IGCPTANIPIEALSEADKLDTGVYFGWCKIHPVDTQKDVHQRQDGTQVEFKYGDGLRKEV 95

Query: 235 --QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDI 291
              T    V + G NP    N     E  +   F +  YG   T +   Y+RPE+ +  +
Sbjct: 96  DINTVLPMVMSLGWNP-FFKNKEKAAEIHVIHKFPETFYGAELTFNILGYIRPELDYTSV 154

Query: 292 EKLKIYMGEDEKKARKILESSYPLSERDRI 321
           E L   +G D + A+  L +    S ++++
Sbjct: 155 ESLIKDIGIDIEVAKDSLATEGYQSYKEQV 184


>gi|289806306|ref|ZP_06536935.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 52

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 264 DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           D   ++YG+   V     +R E +F  +++LK  +  DE  ARK  
Sbjct: 1   DVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARKFF 46


>gi|71032763|ref|XP_766023.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352980|gb|EAN33740.1| hypothetical protein TP01_0503 [Theileria parva]
          Length = 450

 Score = 67.9 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 185 LLGYRFTIESDVIHGEKIGR-TLGFPTANMQLSPDILLKEGVYAIRFRTQD------QTS 237
           LL  R  I  +V  G   G   LG  TAN++ +    L  GVY               T 
Sbjct: 313 LLKNRVKIVGEVFKGSGRGLPLLGISTANLKCNSFPHLITGVYIAYGYIYGSKEVSEDTC 372

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
            + + + G NP        +   F   F+  + G +  +  + YLR + K+  +E L   
Sbjct: 373 VNSIVSIGFNPHFYGENYSVEPYFYHKFNDSLLGLKVHLDIYGYLRTDSKYNSLEDLVQA 432

Query: 298 MGEDEKKARKILES 311
           +  D    + IL S
Sbjct: 433 IQSDLHLNKLILTS 446


>gi|325119977|emb|CBZ55530.1| Riboflavin kinase / FAD synthetase domain containing protein, related
            [Neospora caninum Liverpool]
          Length = 1018

 Score = 67.9 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 236  TSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              Y    + G NP    N  + +E +   +F ++  G   TV    +LR E  F     L
Sbjct: 926  KVYKTAMSIGYNPYF-DNTSVTIEPYIYHEFDEDFVGSPITVVITGFLRSEASFSSFGHL 984

Query: 295  KIYMGEDEKKARKILESSYPLSER 318
               +  D +  R  L+    L  +
Sbjct: 985  IQAIQNDCEICRIALDHPIHLPSK 1008


>gi|254574280|ref|XP_002494249.1| hypothetical protein [Pichia pastoris GS115]
 gi|238034048|emb|CAY72070.1| hypothetical protein PAS_chr4_0996 [Pichia pastoris GS115]
          Length = 179

 Score = 67.9 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 35/150 (23%)

Query: 206 LGFPTANM---QLSPDILLKEGVYAIRFRTQD---------------------------- 234
           +G PTAN+    LS    L  GVY    +                               
Sbjct: 27  IGCPTANIPIEALSEADKLDTGVYFGWCKIHPVDTQKDVHQRQDGTQVEFKYGDGLRKEV 86

Query: 235 --QTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDI 291
              T    V + G NP    N     E  +   F +  YG   T +   Y+RPE+ +  +
Sbjct: 87  DINTVLPMVMSLGWNP-FFKNKEKAAEIHVIHKFPETFYGAELTFNILGYIRPELDYTSV 145

Query: 292 EKLKIYMGEDEKKARKILESSYPLSERDRI 321
           E L   +G D + A+  L +    S ++++
Sbjct: 146 ESLIKDIGIDIEVAKDSLATEGYQSYKEQV 175


>gi|170099926|ref|XP_001881181.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643860|gb|EDR08111.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 200

 Score = 67.5 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 31/155 (20%)

Query: 186 LGYRFTIESDVIHGEKIGR-TLGFPTANMQLSPDILL-----KEGVYAIR---------- 229
             Y   +E  VI G   G   LG PTAN+ +  ++          VY             
Sbjct: 16  APYPLQMERKVIRGFGRGSGELGIPTANLPVDDNLRPWIAEITSWVYFGWASLRLPSSHP 75

Query: 230 ---FRTQDQTS----------YSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCT 275
                + D T+          YS V + G N     N     E  +  +F  + YG    
Sbjct: 76  NQPMASPDTTTTPEASSRFSIYSMVMSIGYN-RFYKNKEQSAEVHVLHEFKADFYGVEMR 134

Query: 276 VSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           +    ++R E  + +++ L   +  D   ARK L+
Sbjct: 135 LLITGFIREEKDYPELKALIEDITVDCDVARKNLD 169


>gi|293363921|ref|ZP_06610657.1| riboflavin kinase [Mycoplasma alligatoris A21JP2]
 gi|292552411|gb|EFF41185.1| riboflavin kinase [Mycoplasma alligatoris A21JP2]
          Length = 285

 Score = 66.7 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 85/229 (37%), Gaps = 37/229 (16%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQA-IKIANNSPITV-------LS-FNPHPRTIIQSSSPI 69
             V  +G F+ +HLGH+ + ++A    +    I V       ++ FN    T        
Sbjct: 22  NDVFIMGAFESLHLGHYELFKKANNDFSTQRKILVYFNNSEQMTKFN---STFF------ 72

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
              +   I++K + K+GF + I   ++    N   + FI  +        T I G  F+F
Sbjct: 73  ---TSQKIRDKWISKIGFDSAISIDYSQ-IKNLEGKNFIDLIANSK--KTTFIVGDDFKF 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G         + K    Y    + +  L+ N    +S+S ++  +  G +     LL ++
Sbjct: 127 GFKAKNTWKDISKFNPIY--SVISVPILKVNN-TKISTSKLKEFIEFGDIEELNDLLLFK 183

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
           +T  S V   ++I          +       L  GVY IR        Y
Sbjct: 184 YTFSSTVKINKEI----------ILNENIQKLHSGVYIIRILYNQMLYY 222


>gi|213863200|ref|ZP_03386455.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 75

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FRFG  R GD  +LQK G +YGF               +SS+ +R AL   ++  A  LL
Sbjct: 1   FRFGAGREGDFLLLQKAGMEYGFDITSTQTFCE-GGVRISSTAVRQALADDNLALAESLL 59

Query: 187 GYRFTIESDVIHGEKI 202
           G+ F I   V+HG+++
Sbjct: 60  GHPFAISGRVVHGDEL 75


>gi|315050222|ref|XP_003174485.1| riboflavin kinase [Arthroderma gypseum CBS 118893]
 gi|311339800|gb|EFQ99002.1| riboflavin kinase [Arthroderma gypseum CBS 118893]
          Length = 218

 Score = 66.3 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 57/189 (30%), Gaps = 50/189 (26%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQ--- 233
           NA     +   +   VI G   G   LG PTAN+    LS    L++GVY          
Sbjct: 14  NAGPEAPFPIRMSGPVIKGFGRGSKELGIPTANIPAETLSEYPDLQQGVYYGVATLDPSQ 73

Query: 234 ------------------DQTSYSGVANFGRNPTMVPNGPLLLESFI------------- 262
                                 +  V + G NP    N    +E  I             
Sbjct: 74  FKHTRTEHDEADQPAAKSGTDIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSMESSPSSA 132

Query: 263 ----------FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE-S 311
                     F    + YG    +    Y+RPE  +   E L   +  D   AR+ L+  
Sbjct: 133 DTDTSGQRPLFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRIDCDVARRSLKRK 192

Query: 312 SYPLSERDR 320
           +Y L   D 
Sbjct: 193 AYALFLNDD 201


>gi|150020966|ref|YP_001306320.1| glycerol-3-phosphate cytidylyltransferase [Thermosipho
           melanesiensis BI429]
 gi|149793487|gb|ABR30935.1| glycerol-3-phosphate cytidylyltransferase [Thermosipho
           melanesiensis BI429]
          Length = 167

 Score = 66.0 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 39/176 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A K+ +   + V +                 + P   +
Sbjct: 2   KTVITYGTFDLFHIGHLRLLQRAKKLGDKLIVAVSTDE------FNLKKGKKAIIPYEQR 55

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            +I++ +     +I           S EQ ++   ++   V   + G  ++      G  
Sbjct: 56  AEIVKNIKSVDLVIPEN--------SWEQKVED--IKKYNVDIFVMGEDWK------GRF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK------GHVLNAAHLLG 187
             L+          +++      ++Q +SS+ IR  L          +  A  +LG
Sbjct: 100 DYLKDYC-----EVIYLP-----RTQGISSTEIRNILQYMSELSITDLKKALDILG 145


>gi|50292525|ref|XP_448695.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528007|emb|CAG61658.1| unnamed protein product [Candida glabrata]
          Length = 251

 Score = 66.0 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 36/155 (23%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS--PDIL--LKEGVYAIRFRT--------------- 232
               V    +    LG PTAN+ +   P+++  L+ GVY    +                
Sbjct: 86  CCDIVCGFGRGSSELGIPTANVPVDQLPEVVNKLELGVYFGYAKVTPVAHDLEQVEREDG 145

Query: 233 ---------------QDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTV 276
                           D      V + G+NP    N    +E  I  DF    YG +   
Sbjct: 146 RVVSYNYGSHLEEDNGDLEVLPVVLSVGKNP-FYHNDFKTVEIHILHDFKSTFYGAKIKF 204

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +   Y+RPE+ +   E L   +  D + ++++L++
Sbjct: 205 NILGYVRPELDYTSKEALIEDIKTDIEISKQVLDT 239


>gi|70942297|ref|XP_741331.1| riboflavin kinase / FAD synthase family protein, [Plasmodium
           chabaudi chabaudi]
 gi|56519645|emb|CAH79813.1| riboflavin kinase / FAD synthase family protein, putative
           [Plasmodium chabaudi chabaudi]
          Length = 379

 Score = 65.6 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSP----DILLKEGVYAIRFRTQDQTSYS 239
           +      I   V+ G   G   L  PTAN+  +     DI+   G+Y    + +    Y 
Sbjct: 230 IFNKYIYIYGKVVKGFGRGSKYLNIPTANIFNANLTEADIMP--GIYFGISKLK-HKIYK 286

Query: 240 GVANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYM 298
            V + G NP    N  + +E+F++  + ++ Y +   +     LR E  F ++  L   +
Sbjct: 287 TVVSIGYNPYFQ-NKHITIEAFLYYKTNKLFYDENIELIIVGLLRSESNFYELSHLIHAI 345

Query: 299 GEDEKKARKILESSYP 314
             D + AR  L     
Sbjct: 346 QFDCELARIALNQIRH 361


>gi|299747292|ref|XP_001836939.2| riboflavin kinase [Coprinopsis cinerea okayama7#130]
 gi|298407452|gb|EAU84556.2| riboflavin kinase [Coprinopsis cinerea okayama7#130]
          Length = 199

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 48/142 (33%), Gaps = 19/142 (13%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILL----KEGVYA------------IR 229
            +   +E  V  G   G   LG PTAN+       +    K G+Y              +
Sbjct: 40  PFPIALEGKVQRGFGRGGKDLGCPTANLPDESTTAMSSVTKTGIYYGYAQVIPPKDEPTQ 99

Query: 230 FRTQDQTSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKF 288
            R  D      V + G N     N  L  E   +  F  + YG         Y+RPE  +
Sbjct: 100 LRRVDTKVLPMVMSLGWNE-FYKNKRLTAEIHIMHKFESDFYGYEMKAIVLGYIRPEFDY 158

Query: 289 KDIEKLKIYMGEDEKKARKILE 310
              E L   +  D++ A   L+
Sbjct: 159 ISREALIEDIEFDKRVALNCLQ 180


>gi|329767231|ref|ZP_08258758.1| hypothetical protein HMPREF0428_00455 [Gemella haemolysans M341]
 gi|328836898|gb|EGF86545.1| hypothetical protein HMPREF0428_00455 [Gemella haemolysans M341]
          Length = 80

 Score = 65.2 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKI-ANNSPITVLSFNPHP 59
          M +F NI     +       V A+G FDGIH  H  I+  A+ +        V++ +  P
Sbjct: 1  MEIF-NISDISEIKKDNTKRVAALGFFDGIHNAHQKIIGDAVSVATEGVKSIVITLDKSP 59

Query: 60 RTIIQSSSPIFTLSPPSIQ 78
          +     +S    L+P + +
Sbjct: 60 KEYFGKTSE-ELLTPINKK 77


>gi|282850808|ref|ZP_06260182.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|282557760|gb|EFB63348.1| conserved domain protein [Lactobacillus gasseri 224-1]
          Length = 63

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 49  PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY 102
           P+ V++F+ HP+ I ++      L     +E+ +EK+G   L+  KFT    + 
Sbjct: 2   PLMVMTFDKHPKEIYKNDHKFVYLETAREKEQKMEKLGVDYLVIIKFTKNLVSL 55


>gi|240275717|gb|EER39230.1| riboflavin kinase [Ajellomyces capsulatus H143]
          Length = 227

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 56/185 (30%), Gaps = 64/185 (34%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK-----EGVYAI------------ 228
            Y   +   VI G   G   LG PTAN+   PD L        GVY              
Sbjct: 20  PYPMRLSGPVIKGFGRGSKELGIPTANI--PPDSLAPYGDVESGVYYGVAALDPSQFKYK 77

Query: 229 --------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS- 266
                                   +++  +  V + G NP    N    +E  I   F+ 
Sbjct: 78  GNRDEQNGANDAADLNTNADGSEDENENVFPCVLSIGYNP-FYKNTVRSVEIHILPQFTS 136

Query: 267 ---------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                                 + YG R  +    Y+RPE  +  +E L   +  D + A
Sbjct: 137 HAAPQPLPQKTTNQPTRFFRVPDFYGTRLNLLVLGYIRPEYDYVSLEALVEDIRVDCEVA 196

Query: 306 RKILE 310
           R+ LE
Sbjct: 197 RRSLE 201


>gi|158563986|sp|Q6FM49|RIFK_CANGA RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1
          Length = 189

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 36/155 (23%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLS--PDIL--LKEGVYAIRFRT--------------- 232
               V    +    LG PTAN+ +   P+++  L+ GVY    +                
Sbjct: 24  CCDIVCGFGRGSSELGIPTANVPVDQLPEVVNKLELGVYFGYAKVTPVAHDLEQVEREDG 83

Query: 233 ---------------QDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTV 276
                           D      V + G+NP    N    +E  I  DF    YG +   
Sbjct: 84  RVVSYNYGSHLEEDNGDLEVLPVVLSVGKNP-FYHNDFKTVEIHILHDFKSTFYGAKIKF 142

Query: 277 SFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           +   Y+RPE+ +   E L   +  D + ++++L++
Sbjct: 143 NILGYVRPELDYTSKEALIEDIKTDIEISKQVLDT 177


>gi|255027755|ref|ZP_05299741.1| hypothetical protein LmonocytFSL_17861 [Listeria monocytogenes FSL
           J2-003]
          Length = 126

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 21/121 (17%)

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
           K R  D  +L+   + Y      +  +  N+   +SS+NIR  + +GH   A  LLG+ +
Sbjct: 9   KGRDSDVDLLRDLCKPYDIGVTSVPVIETNQ-TKISSTNIRAFIRRGHFQEAEELLGHPW 67

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
            I   V +GE  G           L   +L   G Y             G+ N   N T+
Sbjct: 68  YITGIVENGEMTG-----------LDDYVLPATGTYQTDS---------GIVNVTNNRTI 107

Query: 251 V 251
            
Sbjct: 108 E 108


>gi|225563134|gb|EEH11413.1| riboflavin kinase [Ajellomyces capsulatus G186AR]
          Length = 227

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 56/185 (30%), Gaps = 64/185 (34%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK-----EGVYAI------------ 228
            Y   +   VI G   G   LG PTAN+   PD L        GVY              
Sbjct: 20  PYPMRLSGPVIKGFGRGSKELGIPTANI--PPDSLAPYGDVESGVYYGVAALDPSQFKYK 77

Query: 229 --------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS- 266
                                   +++  +  V + G NP    N    +E  +   F+ 
Sbjct: 78  GNRDEQNGANDAADLNTTADGSEDENENVFPCVLSIGYNP-FYKNTVRSVEIHLLPQFTS 136

Query: 267 ---------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                                 + YG R  +    Y+RPE  +  +E L   +  D + A
Sbjct: 137 HAAPQPLPQKTTDQPTRFFRVPDFYGTRLNLLVLGYIRPEYDYVSLEALVEDIRVDCEVA 196

Query: 306 RKILE 310
           R+ LE
Sbjct: 197 RRSLE 201


>gi|223701668|gb|ACN21145.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701671|gb|ACN21147.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701695|gb|ACN21163.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701698|gb|ACN21165.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701743|gb|ACN21195.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701779|gb|ACN21219.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701782|gb|ACN21221.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701821|gb|ACN21247.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701851|gb|ACN21267.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701854|gb|ACN21269.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701857|gb|ACN21271.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701887|gb|ACN21291.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701920|gb|ACN21313.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701950|gb|ACN21333.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701953|gb|ACN21335.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701956|gb|ACN21337.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701959|gb|ACN21339.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701962|gb|ACN21341.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701965|gb|ACN21343.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701968|gb|ACN21345.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  +++QA +IA    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQIAEQKGLQTAVLTFDP 59


>gi|325093090|gb|EGC46400.1| riboflavin kinase [Ajellomyces capsulatus H88]
          Length = 227

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 56/184 (30%), Gaps = 64/184 (34%)

Query: 188 YRFTIESDVIHGEKIGRT-LGFPTANMQLSPDILLK-----EGVYAI------------- 228
           Y   +   VI G   G   LG PTAN+   PD L        GVY               
Sbjct: 21  YPMRLSGPVIKGFGRGSKELGIPTANI--PPDSLAPYGDVESGVYYGVAALDPSQFKYKG 78

Query: 229 -------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS-- 266
                                  +++  +  V + G NP    N    +E  +   F+  
Sbjct: 79  NRDEQNGANDAADLNTNADGSEDENENVFPCVLSIGYNP-FYKNTVRSVEIHLLPQFTSH 137

Query: 267 --------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
                                + YG R  +    Y+RPE  +  +E L   +  D + AR
Sbjct: 138 AAPQPLPQKATDQPTRFFRVPDFYGTRLNLLVLGYIRPEYDYVSLEALVEDIRVDCEVAR 197

Query: 307 KILE 310
           + LE
Sbjct: 198 RSLE 201


>gi|326471314|gb|EGD95323.1| riboflavin kinase [Trichophyton tonsurans CBS 112818]
          Length = 215

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 51/169 (30%), Gaps = 46/169 (27%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------------- 228
            +   +   VI G   G   LG PTAN+    LS    L+ GVY                
Sbjct: 20  PFPIRMSGPVIKGFGRGSKELGIPTANIPAETLSEYPDLQLGVYYGVAALDPAQFKHTRT 79

Query: 229 ------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI-------------------- 262
                 +        +  V + G NP    N    +E  I                    
Sbjct: 80  ENDAAEQPAHTGTDIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSMESSPIAADTSGQRP 138

Query: 263 -FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            F    + YG    +    Y+RPE  +   E L   +  D   AR+ L+
Sbjct: 139 LFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRIDCDVARRSLK 187


>gi|327303080|ref|XP_003236232.1| riboflavin kinase [Trichophyton rubrum CBS 118892]
 gi|326461574|gb|EGD87027.1| riboflavin kinase [Trichophyton rubrum CBS 118892]
          Length = 215

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 50/170 (29%), Gaps = 46/170 (27%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI------------- 228
             +   +   VI G   G   LG PTAN+    LS    L+ GVY               
Sbjct: 19  SPFPIRMSGPVIKGFGRGSKELGIPTANIPAETLSEYPNLQLGVYYGVTALDPAQFKHTR 78

Query: 229 -------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI------------------- 262
                           +  V + G NP    N    +E  I                   
Sbjct: 79  TESDAADEPAHTGTDIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSMESSPISADTSGQR 137

Query: 263 --FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
             F    + YG    +    Y+RPE  +   E L   +  D   AR+ L+
Sbjct: 138 PLFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRIDCDVARRSLK 187


>gi|326479409|gb|EGE03419.1| riboflavin kinase [Trichophyton equinum CBS 127.97]
          Length = 215

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 51/169 (30%), Gaps = 46/169 (27%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------------- 228
            +   +   VI G   G   LG PTAN+    LS    L+ GVY                
Sbjct: 20  PFPIRMSGPVIKGFGRGSKELGIPTANIPAETLSEYPDLQLGVYYGVAALDPAQFKHTRT 79

Query: 229 ------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI-------------------- 262
                 +        +  V + G NP    N    +E  I                    
Sbjct: 80  ENDAAEQPAHTGTDIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSMESSPIAADTSGQRP 138

Query: 263 -FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
            F    + YG    +    Y+RPE  +   E L   +  D   AR+ L+
Sbjct: 139 LFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRIDCDVARRSLK 187


>gi|221502316|gb|EEE28049.1| riboflavin kinase/fmn adenylyltransferase, putative [Toxoplasma
            gondii VEG]
          Length = 1146

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 27/132 (20%)

Query: 213  MQLSPDILLKEGVYAIRFRTQD-------------------------QTSYSGVANFGRN 247
            ++ S  + L  GVY                                    +    + G N
Sbjct: 997  IRTSHPVALFPGVYYGWATLHPLSLANAGGETEQHEIDRNNAKVERKVEVFKTAMSVGYN 1056

Query: 248  PTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKAR 306
            P    N  + +E +   +F ++  G   TV    +LR E  F     L   +  D +  R
Sbjct: 1057 PYF-GNTSVTIEPYIYHEFDEDFVGSPITVLVTGFLRSEAAFSSFGHLIQAIQNDCEVCR 1115

Query: 307  KILESSYPLSER 318
              L+    LS +
Sbjct: 1116 TALDHPSFLSSK 1127


>gi|296813201|ref|XP_002846938.1| riboflavin kinase [Arthroderma otae CBS 113480]
 gi|238842194|gb|EEQ31856.1| riboflavin kinase [Arthroderma otae CBS 113480]
          Length = 217

 Score = 64.0 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 50/172 (29%), Gaps = 48/172 (27%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQ-------- 233
             +   +   VI G   G   LG PTAN+    LS    L+ GVY               
Sbjct: 19  APFPIRMSGPVIKGFGRGSKELGIPTANIPAESLSEHPDLQLGVYYGVAALDPAQFKHTR 78

Query: 234 ------------DQTSYSGVANFGRNPTMVPNGPLLLESFI------------------- 262
                           +  V + G NP    N    +E  I                   
Sbjct: 79  TEGDAANQPANTGTAIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSMQSSPPPASSAEAS 137

Query: 263 ----FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
               F    + YG    +    Y+RPE  +   E L   +  D   AR+ L+
Sbjct: 138 ERPQFHHFPDFYGTPLNLLILGYIRPEYDYVSREALIDDIRIDCDVARRSLK 189


>gi|223701860|gb|ACN21273.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 64.0 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  +++QA ++A    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQLAEQKGLQTAVLTFDP 59


>gi|223701638|gb|ACN21125.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701680|gb|ACN21153.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701929|gb|ACN21319.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNP 57
          V+A+G FDG+HLGH  ++++A +IA    +   VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKKAKQIAEQKGLQTAVLTFDP 59


>gi|319443175|ref|ZP_07992331.1| hypothetical protein CvarD4_15580 [Corynebacterium variabile DSM
           44702]
          Length = 67

 Score = 63.6 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 256 LLLESFIFDF----SQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
            LLE+F+ DF    S+ +YG+   V   + LR ++ F  ++ L   M  D  + R+   +
Sbjct: 2   FLLEAFVLDFPAGHSKNLYGRTLAVHLCERLRGQLAFDSVDALIECMDSDVARTREWAAT 61

Query: 312 SYPLSE 317
              ++ 
Sbjct: 62  HASVAN 67


>gi|223701632|gb|ACN21121.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701635|gb|ACN21123.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701641|gb|ACN21127.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701644|gb|ACN21129.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701647|gb|ACN21131.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701650|gb|ACN21133.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701653|gb|ACN21135.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701656|gb|ACN21137.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701659|gb|ACN21139.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701662|gb|ACN21141.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701665|gb|ACN21143.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701674|gb|ACN21149.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701677|gb|ACN21151.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701683|gb|ACN21155.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701686|gb|ACN21157.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701689|gb|ACN21159.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701692|gb|ACN21161.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701701|gb|ACN21167.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701704|gb|ACN21169.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701707|gb|ACN21171.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701710|gb|ACN21173.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701713|gb|ACN21175.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701716|gb|ACN21177.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701719|gb|ACN21179.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701722|gb|ACN21181.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701725|gb|ACN21183.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701728|gb|ACN21185.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701731|gb|ACN21187.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701734|gb|ACN21189.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701737|gb|ACN21191.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701740|gb|ACN21193.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701746|gb|ACN21197.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701749|gb|ACN21199.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701752|gb|ACN21201.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701755|gb|ACN21203.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701758|gb|ACN21205.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701761|gb|ACN21207.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701764|gb|ACN21209.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701767|gb|ACN21211.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701770|gb|ACN21213.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701773|gb|ACN21215.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701776|gb|ACN21217.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701785|gb|ACN21223.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701788|gb|ACN21225.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701791|gb|ACN21227.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701794|gb|ACN21229.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701797|gb|ACN21231.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701800|gb|ACN21233.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701803|gb|ACN21235.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701806|gb|ACN21237.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701809|gb|ACN21239.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701812|gb|ACN21241.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701815|gb|ACN21243.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701818|gb|ACN21245.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701824|gb|ACN21249.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701827|gb|ACN21251.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701830|gb|ACN21253.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701833|gb|ACN21255.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701836|gb|ACN21257.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701839|gb|ACN21259.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701842|gb|ACN21261.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701845|gb|ACN21263.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701848|gb|ACN21265.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701863|gb|ACN21275.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701866|gb|ACN21277.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701869|gb|ACN21279.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701872|gb|ACN21281.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701875|gb|ACN21283.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701878|gb|ACN21285.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701881|gb|ACN21287.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701884|gb|ACN21289.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701890|gb|ACN21293.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701893|gb|ACN21295.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701896|gb|ACN21297.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701899|gb|ACN21299.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701902|gb|ACN21301.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701905|gb|ACN21303.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701908|gb|ACN21305.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701911|gb|ACN21307.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701914|gb|ACN21309.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701917|gb|ACN21311.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701923|gb|ACN21315.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701926|gb|ACN21317.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701932|gb|ACN21321.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701935|gb|ACN21323.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701938|gb|ACN21325.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701941|gb|ACN21327.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701944|gb|ACN21329.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701947|gb|ACN21331.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701971|gb|ACN21347.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701974|gb|ACN21349.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701977|gb|ACN21351.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701980|gb|ACN21353.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701983|gb|ACN21355.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701986|gb|ACN21357.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701989|gb|ACN21359.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701992|gb|ACN21361.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701995|gb|ACN21363.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223701998|gb|ACN21365.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702001|gb|ACN21367.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702004|gb|ACN21369.1| hypothetical protein lmo1329 [Listeria monocytogenes]
 gi|223702007|gb|ACN21371.1| hypothetical protein lmo1329 [Listeria monocytogenes]
          Length = 59

 Score = 63.6 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNP 57
          V+A+G FDG+HLGH  +++QA +I         VL+F+P
Sbjct: 21 VMALGFFDGVHLGHQAVIKQAKQIAGQKGLQTAVLTFDP 59


>gi|6320442|ref|NP_010522.1| Fmn1p [Saccharomyces cerevisiae S288c]
 gi|41017621|sp|Q03778|RIFK_YEAST RecName: Full=Riboflavin kinase; AltName: Full=Flavin
           mononucleotide kinase 1; Flags: Precursor
 gi|817822|emb|CAA89722.1| unknown [Saccharomyces cerevisiae]
 gi|45269357|gb|AAS56059.1| YDR236C [Saccharomyces cerevisiae]
 gi|190404814|gb|EDV08081.1| riboflavin kinase [Saccharomyces cerevisiae RM11-1a]
 gi|207346551|gb|EDZ73020.1| YDR236Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270000|gb|EEU05249.1| Fmn1p [Saccharomyces cerevisiae JAY291]
 gi|259145472|emb|CAY78736.1| Fmn1p [Saccharomyces cerevisiae EC1118]
 gi|285811253|tpg|DAA12077.1| TPA: Fmn1p [Saccharomyces cerevisiae S288c]
 gi|323334107|gb|EGA75491.1| Fmn1p [Saccharomyces cerevisiae AWRI796]
 gi|323338182|gb|EGA79415.1| Fmn1p [Saccharomyces cerevisiae Vin13]
          Length = 218

 Score = 63.6 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 41/158 (25%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKE------GVYA------------------ 227
               V    +    LG PTAN+ +  + L K       GVY                   
Sbjct: 54  YCDIVCGFGRGSAELGIPTANVPI--NQLPKGINDLDLGVYFGFAHIKTVDGQELSVETR 111

Query: 228 --IRFRTQDQTSY-----------SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQR 273
              R    +   Y             V + G+NP    N    +E  I  DF  + YG R
Sbjct: 112 RDGRTVVYNYGQYLSEANDDLSVLPMVLSVGKNP-FYGNDFKTMELHIIHDFKNDFYGAR 170

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +   ++RPE+ +   E L   +  D + A+ +L +
Sbjct: 171 VKFNILGHIRPELNYTTKEALIEDINIDIRTAQTVLAT 208


>gi|323355577|gb|EGA87397.1| Fmn1p [Saccharomyces cerevisiae VL3]
          Length = 199

 Score = 63.6 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 41/158 (25%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKE------GVYA------------------ 227
               V    +    LG PTAN+ +  + L K       GVY                   
Sbjct: 35  YCDIVCGFGRGSAELGIPTANVPI--NQLPKGINDLDLGVYFGFAHIKTVDGQELSVETR 92

Query: 228 --IRFRTQDQTSY-----------SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQR 273
              R    +   Y             V + G+NP    N    +E  I  DF  + YG R
Sbjct: 93  RDGRTVVYNYGQYLSEANDDLSVLPMVLSVGKNP-FYGNDFKTMELHIIHDFKNDFYGAR 151

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +   ++RPE+ +   E L   +  D + A+ +L +
Sbjct: 152 VKFNILGHIRPELNYTTKEALIEDINIDIRTAQTVLAT 189


>gi|151942213|gb|EDN60569.1| riboflavin kinase [Saccharomyces cerevisiae YJM789]
 gi|323305559|gb|EGA59301.1| Fmn1p [Saccharomyces cerevisiae FostersB]
 gi|323309775|gb|EGA62981.1| Fmn1p [Saccharomyces cerevisiae FostersO]
          Length = 218

 Score = 63.3 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 53/158 (33%), Gaps = 41/158 (25%)

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKE------GVYA------------------ 227
               V    +    LG PTAN+ +  + L K       GVY                   
Sbjct: 54  YCDIVCGFGRGSAELGIPTANVPI--NQLPKGINDLDLGVYFGFAHIKTVDGQELSVETR 111

Query: 228 --IRFRTQDQTSY-----------SGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQR 273
              R    +   Y             V + G+NP    N    +E  I  DF  + YG +
Sbjct: 112 RDGRTVVYNYGQYLSEANDDLSVLPMVLSVGKNP-FYGNDFKTMELHIIHDFKNDFYGAK 170

Query: 274 CTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
              +   ++RPE+ +   E L   +  D + A+ +L +
Sbjct: 171 VKFNILGHIRPELNYTTKEALIEDINIDIRTAQTVLAT 208


>gi|221481816|gb|EEE20186.1| riboflavin kinase/fmn adenylyltransferase, putative [Toxoplasma
            gondii GT1]
          Length = 1031

 Score = 62.9 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 236  TSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKL 294
              +    + G NP    N  + +E +   +F ++  G   TV    +LR E  F     L
Sbjct: 930  EVFKTAMSVGYNPYF-GNTSVTIEPYIYHEFDEDFVGSPITVLVTGFLRSEAAFSSFGHL 988

Query: 295  KIYMGEDEKKARKILESSYPLSER 318
               +  D +  R  L+    LS +
Sbjct: 989  IQAIQNDCEVCRTALDHPSFLSSK 1012


>gi|167949935|ref|ZP_02537009.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 52

 Score = 62.1 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN--NSPITVL 53
          M V   +    ++  H  G V  IGNFDG+HLGH  +L    +       P TV+
Sbjct: 1  MQVIRGL---HNIRAHHHGCVATIGNFDGVHLGHQSVLRHLREKGAEFGLPATVI 52


>gi|303312221|ref|XP_003066122.1| Riboflavin kinase / FAD synthetase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105784|gb|EER23977.1| Riboflavin kinase / FAD synthetase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320040112|gb|EFW22046.1| riboflavin kinase [Coccidioides posadasii str. Silveira]
          Length = 234

 Score = 62.1 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 57/202 (28%), Gaps = 71/202 (35%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRT--------- 232
             Y   +   VI G   G   LG PTAN+    LS    L+ GVY               
Sbjct: 19  SPYPIRLSGPVIKGFGRGSKELGIPTANIPADGLSEHPGLESGVYYGVAALDPSRFQPTD 78

Query: 233 ---------QDQTSYSGVANFGRNPTMVPNGPLLLESFI--------------------- 262
                     + T    V + G NP    N    +E  I                     
Sbjct: 79  AEIQKDRPSNETTILPCVLSIGYNP-FYKNTVRSVEIHILPHLSLQSSPSASPLSSTPTP 137

Query: 263 --------------------FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
                               F    + YG    +    Y+RPE  +  +E L   +  D 
Sbjct: 138 DPTSSPGDNSASKPPHTRHHFHHFPDFYGTPLNLLILGYIRPEYDYVSLEALVEDIRVDC 197

Query: 303 KKARKILESSYPLSERDRIICF 324
           + A++ L        R + ICF
Sbjct: 198 EVAKRSLA-------RRKYICF 212


>gi|255715317|ref|XP_002553940.1| KLTH0E10670p [Lachancea thermotolerans]
 gi|238935322|emb|CAR23503.1| KLTH0E10670p [Lachancea thermotolerans]
          Length = 184

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 50/162 (30%), Gaps = 35/162 (21%)

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS--PDIL--LKEGVYAIRFRT------- 232
           +           V    +    LG PTAN+     P ++  L  GV+    R        
Sbjct: 15  NPYPITTEFCDIVCGFGRGSSELGVPTANVLFEQVPKVVESLPLGVFFGFARLVQAKKGS 74

Query: 233 ----------------------QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD-FSQEI 269
                                 ++   +  V + G NP    N    +E  I   F  + 
Sbjct: 75  KRTLRRPDGSHVDFNFGQSLSDEEMQVWPVVLSIGLNP-FYQNDTKTVELHIIHKFGHDF 133

Query: 270 YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILES 311
           YG +   +   Y+RPE+ +   E L   +  D K A   L  
Sbjct: 134 YGAKVKFNILGYIRPELDYTTKEALIKDIKTDIKIATNTLAK 175


>gi|261195054|ref|XP_002623931.1| riboflavin kinase [Ajellomyces dermatitidis SLH14081]
 gi|239587803|gb|EEQ70446.1| riboflavin kinase [Ajellomyces dermatitidis SLH14081]
 gi|239610704|gb|EEQ87691.1| riboflavin kinase [Ajellomyces dermatitidis ER-3]
          Length = 241

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 60/186 (32%), Gaps = 62/186 (33%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVY--------------- 226
             Y   +   VI G   G   LG PTAN+    LSP   ++ GVY               
Sbjct: 19  APYPMKLSGPVIKGFGRGSKELGIPTANIPPDSLSPYGDVESGVYYGVAALDPSKFKYKA 78

Query: 227 -----------AIRFRTQDQTS--------YSGVANFGRNPTMVPNGPLLLESFIF-DFS 266
                      A+   T+  +         +  V + G NP    N    +E  +   F+
Sbjct: 79  GSDENIQPNGAAVTQATESNSENENQNQNIFPCVLSIGYNP-FYKNTVRSVEIHLLPQFT 137

Query: 267 ----------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                                  + YG R  +    Y+RPE  +  +E L   +  D + 
Sbjct: 138 HRTTPSSPSPNSTDQPNRFFRIPDFYGTRLNLLVLGYIRPEYDYVSLEALVEDIRIDCEV 197

Query: 305 ARKILE 310
           A++ LE
Sbjct: 198 AKRSLE 203


>gi|327348857|gb|EGE77714.1| riboflavin kinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 241

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 60/186 (32%), Gaps = 62/186 (33%)

Query: 186 LGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVY--------------- 226
             Y   +   VI G   G   LG PTAN+    LSP   ++ GVY               
Sbjct: 19  APYPMKLSGPVIKGFGRGSKELGIPTANIPPDSLSPYGDVESGVYYGVAALDPSKFKYKA 78

Query: 227 -----------AIRFRTQDQTS--------YSGVANFGRNPTMVPNGPLLLESFIF-DFS 266
                      A+   T+  +         +  V + G NP    N    +E  +   F+
Sbjct: 79  GSDENIQPNGAAVTQATESNSENENQNQNIFPCVLSIGYNP-FYKNTVRSVEIHLLPQFT 137

Query: 267 ----------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKK 304
                                  + YG R  +    Y+RPE  +  +E L   +  D + 
Sbjct: 138 HRTTPSSPSPNSTDQPNRFFRIPDFYGTRLNLLVLGYIRPEYDYVSLEALVEDIRIDCEV 197

Query: 305 ARKILE 310
           A++ LE
Sbjct: 198 AKRSLE 203


>gi|238586960|ref|XP_002391330.1| hypothetical protein MPER_09259 [Moniliophthora perniciosa FA553]
 gi|215455845|gb|EEB92260.1| hypothetical protein MPER_09259 [Moniliophthora perniciosa FA553]
          Length = 119

 Score = 60.9 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 238 YSGVANFGRNPTMVPNGPLLLESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
              V + G NP    N  L  E  I  +F  + YG +       Y+RPE+ +  +E L  
Sbjct: 28  LPMVMSIGWNP-YYKNERLTAEVHIIHEFKHDFYGYQVRAIVLGYIRPELDYTSLEALIE 86

Query: 297 YMGEDEKKA 305
            +  D++ A
Sbjct: 87  DIDTDKRVA 95


>gi|295400091|ref|ZP_06810071.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977870|gb|EFG53468.1| FAD synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 176

 Score = 60.9 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L++K  + G  F +G+   GD  ++++    Y      ++ ++ N  + +SS+ IR  + 
Sbjct: 9   LQIKHAVAGYDFSYGRKGKGDLAMMEE-DSGYSITVTKVEHVKRND-EKISSTLIRNKIR 66

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            G +      LG  +  +  +I  +     L
Sbjct: 67  LGLMEELPDYLGEFYETKGKMICTDGKDELL 97


>gi|4379138|emb|CAA83734.1| similar protein X in RPST-ILES region [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 70

 Score = 60.2 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 250 MVPNGPLLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
           +  N   + E++IF+FS +IY  + T    DY+R   K   +++LK  +  D+K+  K +
Sbjct: 6   INRNNLKVFETYIFNFSNDIYNSKITFELLDYIRDNQKINSLDQLKTLLNNDKKECLKRM 65

Query: 310 ES 311
           E 
Sbjct: 66  EK 67


>gi|302665535|ref|XP_003024377.1| hypothetical protein TRV_01443 [Trichophyton verrucosum HKI 0517]
 gi|291188429|gb|EFE43766.1| hypothetical protein TRV_01443 [Trichophyton verrucosum HKI 0517]
          Length = 227

 Score = 60.2 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 50/182 (27%), Gaps = 58/182 (31%)

Query: 186 LGYRFTIESDVIHGEKIGRT-------------LGFPTANMQ---LSPDILLKEGVYAI- 228
             +   +   VI G   G               LG PTAN+    LS    L+ GVY   
Sbjct: 19  SPFPIRMSGPVIKGFGRGSKEVRRRPAHLCFCPLGIPTANIPAETLSEYPDLQLGVYYGV 78

Query: 229 -------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI------- 262
                                       +  V + G NP    N    +E  I       
Sbjct: 79  AALDPAQFKYTRTESDAADEPVHTGTDIFPCVLSIGYNP-FYKNTVRSVEIHILPHLSME 137

Query: 263 --------------FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKI 308
                         F    + YG    +    Y+RPE  +   E L   +  D   AR+ 
Sbjct: 138 SSPIAADTSGQRPLFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRIDCDVARRS 197

Query: 309 LE 310
           L+
Sbjct: 198 LK 199


>gi|124513894|ref|XP_001350303.1| riboflavin kinase / FAD synthase family protein, putative
           [Plasmodium falciparum 3D7]
 gi|23615720|emb|CAD52712.1| riboflavin kinase / FAD synthase family protein, putative
           [Plasmodium falciparum 3D7]
          Length = 707

 Score = 60.2 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL--LKEGVYAIRFRTQDQTSYSGV 241
           +      I   V+ G   G   L  PTAN+     I   +  G+Y    + +D   +  V
Sbjct: 561 IFKKYLYIYGKVVKGFGRGSKYLNLPTANIFHPNFISADIMPGIYFGICKLRD-KIFKSV 619

Query: 242 ANFGRNPTMVPNGPLLLESFIFDFSQEI-YGQRCTVSFFDYLRPEIKFKDIEKLKIYMGE 300
            + G NP    N  + +E+F++  + ++ Y +   +     +R E  F     L   +  
Sbjct: 620 ISIGYNPYF-KNKHMTIEAFLYYKTDDLFYDENIHLIIIGIIRSESNFAYFSHLIQAIQF 678

Query: 301 DEKKARKILES 311
           D + AR +L  
Sbjct: 679 DCELARIVLNK 689


>gi|242765267|ref|XP_002340940.1| Riboflavin kinase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724136|gb|EED23553.1| Riboflavin kinase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 229

 Score = 59.4 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 51/175 (29%), Gaps = 53/175 (30%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------------- 228
            Y   +   VI G   G   LG PTAN+    L     L+ GVY                
Sbjct: 20  PYPIRLSGPVIKGFGRGSKELGIPTANIPPGGLEAYPSLQTGVYYGVVALDPARFEYNQI 79

Query: 229 ----------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI---------- 262
                           + +  + T    V + G NP    N    +E  I          
Sbjct: 80  EAAAQTGSSESADAEPKKKKNEITILPAVLSIGYNP-FYKNEVKSIEIHIMPPLTSPSPT 138

Query: 263 --------FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKIL 309
                   F    + Y     +    Y+RPE  +   E L   +  D + ARK L
Sbjct: 139 SNENPTTTFFKLPDFYSTHLNLLILGYIRPEFDYVSREALVEDIRIDCEVARKSL 193


>gi|154281523|ref|XP_001541574.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150411753|gb|EDN07141.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 199

 Score = 59.4 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 52/170 (30%), Gaps = 63/170 (37%)

Query: 201 KIGRTLGFPTANMQLSPDILLK-----EGVYAI--------------------------- 228
           ++   LG PTAN+   PD L        GVY                             
Sbjct: 7   RVQSFLGIPTANI--PPDSLAPYGDVESGVYYGVAALDPSQFKYKGNRDEQNGPNDAADL 64

Query: 229 -----RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS---------------- 266
                    +++  +  V + G NP    N    +E  +   F+                
Sbjct: 65  NTTADGSEDENENVFPCVLSIGYNP-FYKNTVRSVEIHLLPQFTSHAAPKPLPQKTTDQP 123

Query: 267 ------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
                  + YG R  +    Y+RPE  +  +E L   +  D + AR+ LE
Sbjct: 124 TRFFRVPDFYGTRLNLLVLGYIRPEFDYVSLEALVEDIRVDCEVARRSLE 173


>gi|320449407|ref|YP_004201503.1| pantoate--beta-alanine ligase [Thermus scotoductus SA-01]
 gi|320149575|gb|ADW20953.1| pantoate--beta-alanine ligase [Thermus scotoductus SA-01]
          Length = 276

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 35/195 (17%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           M V H + E+ Q+LP    G V  +G    +H GH  ++E+A K     P  V+S   +P
Sbjct: 1   MKVAHTVAELRQALPREGVGFVPTMGY---LHRGHLALVERARKEN---PFVVVSIFVNP 54

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--- 116
                              + +LE+ G   L    F         + F  +V VE     
Sbjct: 55  LQFGPGEDYHRYPRDLKRDQALLEEAGVDLL----FAPGVEEMYPQGFATRVSVEGPLTA 110

Query: 117 ------------EVKTVI------TG-TKFRFGKDRAGDRGILQKRGEKYGF--HTVFID 155
                        V TV+       G ++  FG+       +++K     GF    V + 
Sbjct: 111 LWEGEVRPGHFQGVATVVARLFLLVGPSRAYFGEKDYQQLLVVRKMVRDLGFPLEVVGVP 170

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 171 TVREEDGLALSSRNV 185


>gi|295673252|ref|XP_002797172.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226282544|gb|EEH38110.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 241

 Score = 59.0 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 55/194 (28%), Gaps = 71/194 (36%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------------- 228
            +   +   VI G   G   LG PTAN+    LS    ++ GVY                
Sbjct: 20  PFPMKLSGPVIKGFGRGSKELGIPTANIPPDSLSAYGHVESGVYYGVAALDPSKFKYKKD 79

Query: 229 ------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS--- 266
                                  D   +  V + G NP    N    +E  +   F+   
Sbjct: 80  SDAEKQTNGALETPPPEPTLEDADANVFPCVLSIGYNP-FYKNTVRSVEIHLLPKFTSPS 138

Query: 267 ------------------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                                          + YG R  +    Y+RPE  +  +E L  
Sbjct: 139 SSMNGSPSAHPINNTAQTNQQNQRPNFLRLPDFYGTRLNLLVLGYIRPEYDYVSLEALVD 198

Query: 297 YMGEDEKKARKILE 310
            +  D + AR+ LE
Sbjct: 199 DIRIDCEVARRSLE 212


>gi|225681010|gb|EEH19294.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 241

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 56/196 (28%), Gaps = 71/196 (36%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQ--------- 233
            +   +   VI G   G   LG PTAN+    LS    ++ GVY                
Sbjct: 20  PFPMKLSGPVIKGFGRGSKELGIPTANIPPDSLSAYGHVESGVYYGVAALDPSKFRYKRD 79

Query: 234 -----------------------DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS--- 266
                                  D   +  V + G NP    N    +E  +   F+   
Sbjct: 80  SDAEKHTNGALETPPPEPTPEDADANVFPCVLSIGYNP-FYKNTVRSVEIHLLPQFTSPS 138

Query: 267 ------------------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                                          + YG R  +    Y+RPE  +  +E L  
Sbjct: 139 SSMNGSPSAHPINNTAQTNQQTQPTNFFRLPDFYGTRLNLLVLGYIRPEYDYVSLEALVD 198

Query: 297 YMGEDEKKARKILESS 312
            +  D + AR+ LE +
Sbjct: 199 DIRIDCEVARRSLERT 214


>gi|218294605|ref|ZP_03495459.1| pantoate/beta-alanine ligase [Thermus aquaticus Y51MC23]
 gi|218244513|gb|EED11037.1| pantoate/beta-alanine ligase [Thermus aquaticus Y51MC23]
          Length = 276

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 84/274 (30%), Gaps = 55/274 (20%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           M +   + E+  +LP    G V  +G    +H GH  ++E+A      +   V+S   +P
Sbjct: 1   MKLARTVAELKAALPREGVGFVPTMGY---LHRGHLALVERAR---RENAFVVVSIFVNP 54

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                                +LE+ G   L    F  E A    + F  +V VE   + 
Sbjct: 55  LQFGPGEDYHRYPRDLDRDAALLEEAGVDLL----FAPEVAEMYPKGFATRVQVEG-PLT 109

Query: 120 TVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGF--HTVFI 154
            +  G                        +  FG+       +++K     GF    V +
Sbjct: 110 ALWEGEVRPGHFQGVATVVARLFLLVRPERAYFGEKDYQQLLVIRKMVRDLGFPLEVVGV 169

Query: 155 DELRNNKSQIVSSSNI--------------RTALTKGHVL----NAAHLLGYRFTIESDV 196
             +R      +SS N+              R  +    V     + A  L     +  +V
Sbjct: 170 PTVREEDGLALSSRNVYLSPETRKKASVLYRALMAMREVALSGGSVAQALEAGERVLGEV 229

Query: 197 IHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRF 230
                    +  P   + LS  +    G+ A RF
Sbjct: 230 PEFRPDYLAIVHPDTLLPLSRLVPGARGLVAGRF 263


>gi|170288104|ref|YP_001738342.1| glycerol-3-phosphate cytidylyltransferase [Thermotoga sp. RQ2]
 gi|170175607|gb|ACB08659.1| glycerol-3-phosphate cytidylyltransferase [Thermotoga sp. RQ2]
          Length = 185

 Score = 58.3 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 60/166 (36%), Gaps = 33/166 (19%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   V+  G FD  H+GH  +L++A  + +   + V +          +      L P  
Sbjct: 1   MGKVVITYGTFDLFHIGHLNLLKRAKALGDYLIVGVSTDE------FNAVKGKKALIPFE 54

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+  +     +I             EQ I+   ++   V  ++ G  +       G
Sbjct: 55  QRAEIVASIKYVDLVIP--------ETCWEQKIED--IKKYNVDILVMGKDW------EG 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
               L+K  E           +   +++ +SSS +R+ L K  +  
Sbjct: 99  KFDYLKKYCEV----------VYLERTKGISSSYLRSILKKVRLQK 134


>gi|152978492|ref|YP_001344121.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           succinogenes 130Z]
 gi|150840215|gb|ABR74186.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           succinogenes 130Z]
          Length = 152

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 33/159 (20%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   ++  G FD  H+GH  +L++   + +   + V +                T+ P  
Sbjct: 1   MAKTIITYGTFDLFHIGHLKLLQRLKALGDKLIVAVSTDE------FNQGKGKTTVIPYE 54

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+  +     +I           S EQ I    V+  +V     G  +       G
Sbjct: 55  HRAEIVANIKCVDLVIP--------ESSWEQKITD--VQKYDVDIFAIGNDW------EG 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               L++  E           +   +++ +SS+ I+ AL
Sbjct: 99  KFDFLKEYCEV----------VYLERTKDISSTQIKQAL 127


>gi|88812794|ref|ZP_01128040.1| TagD protein [Nitrococcus mobilis Nb-231]
 gi|88790032|gb|EAR21153.1| TagD protein [Nitrococcus mobilis Nb-231]
          Length = 155

 Score = 57.9 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 33/157 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  + E+A +  +   + V +          S      L P   + +
Sbjct: 7   VITYGTFDLFHIGHLRLFERAKEYGDKLIVAVSTDE------FNSVKGKKVLIPYEQRAE 60

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I++ +     +I           S EQ ++   V    V T+I G  +       G    
Sbjct: 61  IVKSIRCVDIVIP--------EMSWEQKVED--VNKHHVDTLIMGKDW------EGQFDE 104

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++  E           +  +++Q +S++ ++++L K
Sbjct: 105 LKRFCEV----------VYLDRTQDISTTRLKSSLKK 131


>gi|289806304|ref|ZP_06536933.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 48

 Score = 57.5 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 218 DILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFI 262
            +   +GVYA+           GVAN G  PT+       LE  +
Sbjct: 5   QVSPVKGVYAVEVTGLGDKPLPGVANIGTRPTVAGV-RQQLEVHL 48


>gi|119193270|ref|XP_001247241.1| hypothetical protein CIMG_01012 [Coccidioides immitis RS]
          Length = 205

 Score = 57.1 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 52/186 (27%), Gaps = 71/186 (38%)

Query: 202 IGRTLGFPTANMQ---LSPDILLKEGVYAIRFRTQ------------------DQTSYSG 240
               LG PTAN+    LS    L+ GVY      +                  + T    
Sbjct: 6   RPHQLGIPTANIPADGLSEHPDLESGVYYGVAALEPSRFQPTDAEIQKDQPSNETTILPC 65

Query: 241 VANFGRNPTMVPNGPLLLESFI-------------------------------------- 262
           V + G NP    N    +E  I                                      
Sbjct: 66  VLSIGYNP-FYKNTVRSVEIHILPHLSLQSSPSASPLSSTPTTPDPTSSPGDNSASKPPH 124

Query: 263 ----FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPLSER 318
               F    + YG    +    Y+RPE  +  +E L   +  D + A++ L        R
Sbjct: 125 TRHHFHHFPDFYGTPLNLLILGYIRPEYDYVSLEALVEDIRVDCEVAKRSLA-------R 177

Query: 319 DRIICF 324
            + ICF
Sbjct: 178 RKYICF 183


>gi|212528874|ref|XP_002144594.1| Riboflavin kinase, putative [Penicillium marneffei ATCC 18224]
 gi|210073992|gb|EEA28079.1| Riboflavin kinase, putative [Penicillium marneffei ATCC 18224]
          Length = 240

 Score = 57.1 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 52/187 (27%), Gaps = 59/187 (31%)

Query: 181 NAAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAI-------- 228
           +A     Y   +   VI G   G   LG PTAN+    L+    L+ GVY          
Sbjct: 14  DAGPEAPYPIRLSGPVIKGFGRGSKELGIPTANIPSDGLAAYPSLQTGVYYGVVALDPAQ 73

Query: 229 ----------------------RFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFS 266
                                   + ++ T    V + G NP    N    +E  I    
Sbjct: 74  FVYNKIEPSTSTSTSTPTSASAEGKKEEITILPAVLSIGYNP-FYKNEVKSIEIHIMPPL 132

Query: 267 Q------------------------EIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDE 302
                                    + Y     +    Y+RPE  +   E L   +  D 
Sbjct: 133 SSPSPTSTSPTTTTTESETKFFKLPDFYSTHLNLLILGYIRPEFDYVSREALVEDIRIDC 192

Query: 303 KKARKIL 309
           + AR  L
Sbjct: 193 EVARSSL 199


>gi|308180141|ref|YP_003924269.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308045632|gb|ADN98175.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 131

 Score = 56.7 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 58/155 (37%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + V +          +       +P   ++ 
Sbjct: 4   VITYGTFDLLHKGHIRLLKRAKALGDHLTVCVSTDE------FNAEKGKKAYTPYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           IL+ +     +I           + +Q I  V+     +   + G  ++      G    
Sbjct: 58  ILQAIKYVDEVIP--------ETNWDQKINDVIEN--NIDVFVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+          +++      +++ +SS+ I+  L
Sbjct: 102 LKDYC-----EVIYLP-----RTEGISSTKIKQDL 126


>gi|73538819|ref|YP_299186.1| glycerol-3-phosphate cytidylyltransferase [Ralstonia eutropha
           JMP134]
 gi|72122156|gb|AAZ64342.1| Glycerol-3-phosphate cytidylyltransferase [Ralstonia eutropha
           JMP134]
          Length = 158

 Score = 56.3 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 21/157 (13%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +AIG FD  H+GH   L+ A        +T+++ +    T++          P   + +I
Sbjct: 19  LAIGVFDLFHVGHLRYLQYARARCRTL-VTLVTRD---ATVLAKKQRTPA-MPEGERVEI 73

Query: 82  LEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++ +G    ++    TL+      E  ++ +  E L V  +  G  +R     +     L
Sbjct: 74  VQGLGWVDEVMLQPGTLD----DTEDVLRWM--EALRVDHIFIGEDWR----GSARWQRL 123

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + R    G    +       +S  VS++ +R  +   
Sbjct: 124 EPRIAAMGIGLSWTP-----RSNEVSTTALRERILAS 155


>gi|76664805|emb|CAJ17842.1| hypothetical protein [Candidatus Phytoplasma solani]
          Length = 117

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 46  NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
            ++   +++F P+ +   Q+    F L+    +      +GF  L  ++++ +    + +
Sbjct: 3   KDTKSALINFIPNSKAFFQNQKD-FYLTSYDQKVTFYRFLGFDYLFLWRWSKKLTFLTKD 61

Query: 106 QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELR 158
           +FI  +  +   VK VI   + RFG  + G+   L K      F    ID+  
Sbjct: 62  RFIALL--KQNNVKRVIITKEARFGYQKQGNYQDLIKY-----FEVCLIDDYV 107


>gi|50425239|ref|XP_461211.1| DEHA2F19910p [Debaryomyces hansenii CBS767]
 gi|49656880|emb|CAG89599.1| DEHA2F19910p [Debaryomyces hansenii]
          Length = 152

 Score = 55.2 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 33/118 (27%), Gaps = 32/118 (27%)

Query: 199 GEKIGRTLGFPTANMQLS-PDILLKEGVYAIRFRTQDQTS-------------------- 237
             +    LG PTAN+ +S     L  G+Y    +                          
Sbjct: 28  FGRGSSELGIPTANIPISIALHSLPTGIYYGWCKVIPNDKADISEHTRDDGQPIMFNNGT 87

Query: 238 ---------YSGVANFGRNPTMVPNGPLLLESFIFD-FSQEIYGQRCTVSFFDYLRPE 285
                    +  V + G NP    N     E  I   F    YG     +   Y+RPE
Sbjct: 88  NLEKEELGIFPMVMSIGWNP-FYHNKEKAAEVHIIHKFGDNFYGALIKYNVLGYIRPE 144


>gi|270290616|ref|ZP_06196840.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           7_4]
 gi|270280676|gb|EFA26510.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           7_4]
          Length = 134

 Score = 55.2 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 61/163 (37%), Gaps = 35/163 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ ++  + V +          +       +P   ++ 
Sbjct: 4   VITYGTFDLLHKGHVRLLKRARELGDHLTVCVSTDE------FNAVKGKKAYTPYEDRKH 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  ++      G   
Sbjct: 58  ILEAIKYVDEVI-----------PERGWSQKINDVKENDIDIFVMGDDWK------GKFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L+   +      +++      +++ +S++ I+  L       
Sbjct: 101 FLKDYCK-----VIYLP-----RTEGISTTKIKRDLGLRDYKK 133


>gi|116334147|ref|YP_795674.1| cytidylyltransferase [Lactobacillus brevis ATCC 367]
 gi|116099494|gb|ABJ64643.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus brevis
           ATCC 367]
          Length = 138

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 33/165 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +L++A  + ++  + V S          +       +    ++ 
Sbjct: 4   VITYGTFDLIHKGHIRLLKRAKALGDDLTVCVSSDE------FNAEKGKRAYTSYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + +Q I+ V    +++   + G  ++      G    
Sbjct: 58  ILEAIKYVDHVIP--------ETTWDQKIRDVQENDIDI--FVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           L+          V++      +++ +S++ I+  L      +   
Sbjct: 102 LKDYC-----EVVYLP-----RTEGISTTKIKHDLGLTDEDDWKE 136


>gi|226292297|gb|EEH47717.1| riboflavin kinase [Paracoccidioides brasiliensis Pb18]
          Length = 232

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 55/196 (28%), Gaps = 71/196 (36%)

Query: 187 GYRFTIESDVIHGEKIGRT-LGFPTANMQ---LSPDILLKEGVYAIRFRTQ--------- 233
            +   +   VI G   G   LG PTAN+    LS    ++ GVY                
Sbjct: 20  PFPMKLSGPVIKGFGRGSKELGIPTANIPPDSLSAYGHVESGVYYGVAALDPSKFRYKRD 79

Query: 234 -----------------------DQTSYSGVANFGRNPTMVPNGPLLLESFIF-DFS--- 266
                                  D   +  V + G NP    N    +E  +   F+   
Sbjct: 80  SDAEKHTNGALETPPPEPTPEDADANVFPCVLSIGYNP-FYKNTVRSVEIHLLPQFTSPS 138

Query: 267 ------------------------------QEIYGQRCTVSFFDYLRPEIKFKDIEKLKI 296
                                          + YG R  +    Y+RPE  +  +E L  
Sbjct: 139 SSMNGSPSAHPINNTAQTNQQTQPTNFFRLPDFYGTRLNLLVLGYIRPEYDYVSLEALVD 198

Query: 297 YMGEDEKKARKILESS 312
            +  D + A + LE +
Sbjct: 199 DIRIDCEVAGRSLERT 214


>gi|331701992|ref|YP_004398951.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329129335|gb|AEB73888.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus buchneri
           NRRL B-30929]
          Length = 136

 Score = 53.6 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 33/165 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + + S          +       +    ++ 
Sbjct: 4   VITYGTFDLLHKGHVRLLKRAKALGDHLTVCLSSDE------FNAEKGKKAYTSYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + +Q I  V    ++V   + G  ++      G    
Sbjct: 58  ILEAIKYVDEVIP--------ETNWDQKIHDVQDRDIDV--FVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           L+          V++      +++ +S++ I+  L      +   
Sbjct: 102 LKDYC-----EVVYLP-----RTEGISTTKIKEDLGLTDTEDWKA 136


>gi|260948702|ref|XP_002618648.1| hypothetical protein CLUG_02107 [Clavispora lusitaniae ATCC 42720]
 gi|238848520|gb|EEQ37984.1| hypothetical protein CLUG_02107 [Clavispora lusitaniae ATCC 42720]
          Length = 152

 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 38/133 (28%), Gaps = 33/133 (24%)

Query: 185 LLGYRFTIESDVIHGEKI-GRTLGFPTANMQLSPDI-LLKEGVYAIRF------------ 230
              +     S VI G       LG PTAN+ +   +  L  G+Y                
Sbjct: 12  CTPFPILCSSKVICGFGRGSSELGIPTANVPVEEALNKLDTGIYFGWCQLTPETGKESEY 71

Query: 231 -----------------RTQDQTSYSGVANFGRNPTMVPNGPLLLESF-IFDFSQEIYGQ 272
                              +D T    V + G NP    N     E   +  FS   YG 
Sbjct: 72  IKSEVGKEIHFNYGHKLHDRDSTVLPMVMSLGWNP-FYKNDQKAAEVHIMHQFSDNFYGA 130

Query: 273 RCTVSFFDYLRPE 285
                   Y+RPE
Sbjct: 131 NIRFVILGYIRPE 143


>gi|254463049|ref|ZP_05076465.1| Riboflavin kinase [Rhodobacterales bacterium HTCC2083]
 gi|206679638|gb|EDZ44125.1| Riboflavin kinase [Rhodobacteraceae bacterium HTCC2083]
          Length = 153

 Score = 52.9 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 26/157 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V  +G FD +H+GH  +L+    + +   + V S       ++    P   + P   + +
Sbjct: 13  VYTVGTFDLLHVGHLALLKHCKSLGDTLAVGVAS-----DEVVNLYKPNVPVVPLEQRVE 67

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +  Y      +   A           +     + G  +            
Sbjct: 68  MLEALSCVDIVRPYHALEYVSGCIA-----------VGADIFVIGEDWGTNSHNLDVDAY 116

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++ G++       I ++R N     SS+ I+  +  
Sbjct: 117 LKEMGKE-------IAQVRYNPRT--SSTKIKQMVLA 144


>gi|28378016|ref|NP_784908.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           WCFS1]
 gi|254556223|ref|YP_003062640.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           JDM1]
 gi|300767942|ref|ZP_07077850.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180197|ref|YP_003924325.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|28270850|emb|CAD63755.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           WCFS1]
 gi|254045150|gb|ACT61943.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           JDM1]
 gi|300494483|gb|EFK29643.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308045688|gb|ADN98231.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 132

 Score = 52.9 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 60/155 (38%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + V +          +       +    ++ 
Sbjct: 4   VITYGTFDLLHKGHIRLLKRARALGDHLTVCVSTDE------FNAEKGKHAYTSYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           IL+ +     ++           S +Q I+ V+   +++   + G  +R      G    
Sbjct: 58  ILQAIRYVDEVLP--------EKSWDQKIRDVVDNDIDI--FVMGDDWR------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+          V++      +++ +SS+ I+  L
Sbjct: 102 LKDYC-----EVVYLP-----RTEGISSTRIKHDL 126


>gi|255282329|ref|ZP_05346884.1| glycerol-3-phosphate cytidyltransferase [Bryantella formatexigens
           DSM 14469]
 gi|255267277|gb|EET60482.1| glycerol-3-phosphate cytidyltransferase [Bryantella formatexigens
           DSM 14469]
          Length = 143

 Score = 52.5 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 53/157 (33%), Gaps = 26/157 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL++A +  +   + V + +   +   +       +        + 
Sbjct: 9   TTGVFDMFHIGHLNILKRAKEQCDFLIVGV-TSD---KLCFKRKQKYPIICESDRMAIVA 64

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           E      ++             ++ + K+  V+      V  G+ ++             
Sbjct: 65  ELRCVDQVV------------PQENMDKLEAVKKYGADAVFVGSDWK-------GTETWN 105

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +  +++      +  +  N +  +SS+ +R  L  G 
Sbjct: 106 QYEKEFTEVGCTV--VYLNHTDGISSTILRDRLNAGE 140


>gi|318061853|ref|ZP_07980574.1| bifunctional ADP-heptose synthase [Streptomyces sp. SA3_actG]
          Length = 486

 Score = 52.5 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 14/125 (11%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+   +       V   G FD +H GH  +LE A    +   + + S +    ++ +   
Sbjct: 339 EVVARVRARGGRVVATGGCFDLLHAGHVALLEAARAAGDCLVVCLNSDD----SVRRGKG 394

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLE-----TANYSAEQFIQ--KVLVEWLEVK 119
           P   L P   + ++L  +G   A++   F  E           + + +      + L   
Sbjct: 395 PGRPLVPARDRARLLTALGCVDAVLV--FDEETPERVLRALRPDVWAKGADYTRDGLPEA 452

Query: 120 TVITG 124
            ++ G
Sbjct: 453 DLVEG 457


>gi|227510018|ref|ZP_03940067.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227512953|ref|ZP_03943002.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227523080|ref|ZP_03953129.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083812|gb|EEI19124.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227089761|gb|EEI25073.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227190513|gb|EEI70580.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 136

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 33/165 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + + S          +       +    ++ 
Sbjct: 4   VITYGTFDLLHKGHVRLLKRAKALGDHLTVCLSSDE------FNAEKGKKAYTSYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + +Q I  V    ++V   + G  ++      G    
Sbjct: 58  ILEAIKYVDEVIP--------ETNWDQKIHDVQDRDIDV--FVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           L+          V++      +++ +S++ I+  L      +   
Sbjct: 102 LKDYC-----EVVYLP-----RTEGISTTKIKEDLGLTDSKDWQA 136


>gi|46199718|ref|YP_005385.1| pantoate-beta-alanine ligase [Thermus thermophilus HB27]
 gi|55981744|ref|YP_145041.1| pantoate--beta-alanine ligase [Thermus thermophilus HB8]
 gi|78099061|sp|Q72HS0|PANC_THET2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|78099062|sp|Q5SHF5|PANC_THET8 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|42543909|pdb|1V8F|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
           Synthetase) From Thermus Thermophilus Hb8
 gi|42543910|pdb|1V8F|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
           Synthetase) From Thermus Thermophilus Hb8
 gi|46197344|gb|AAS81758.1| pantoate-beta-alanine ligase [Thermus thermophilus HB27]
 gi|55773157|dbj|BAD71598.1| pantoate--beta-alanine ligase [Thermus thermophilus HB8]
          Length = 276

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 79/266 (29%), Gaps = 54/266 (20%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+  +LP    G V  +G    +H GH  ++E+A      +P  V+S   +P        
Sbjct: 9   ELRAALPREGVGFVPTMGY---LHRGHLALVERAR---RENPFVVVSVFVNPLQFGPGED 62

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG--- 124
                        +L++ G   L    F         E F  +V VE   +  +  G   
Sbjct: 63  YHRYPRDLERDRALLQEAGVDLL----FAPGVEEMYPEGFATRVQVEG-PLTALWEGAVR 117

Query: 125 --------------------TKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKS 162
                                +  FG+       ++++     GF    V +  +R    
Sbjct: 118 PGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVREEDG 177

Query: 163 QIVSSSNI--------------RTALTKGHVL----NAAHLLGYRFTIESDVIHGEKIGR 204
             +SS N+              R  L    V     + A  L         V    K   
Sbjct: 178 LALSSRNVYLSPETRKKAPVLYRALLAMREVAGQGGSVAEALRAGEEALRAVPEFRKDYL 237

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRF 230
            +  P   + LS  +    G+ A RF
Sbjct: 238 AIVHPETLLPLSDWVAGARGIVAGRF 263


>gi|116492396|ref|YP_804131.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus pentosaceus
           ATCC 25745]
 gi|116102546|gb|ABJ67689.1| Glycerol-3-phosphate cytidylyltransferase [Pediococcus pentosaceus
           ATCC 25745]
          Length = 134

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 35/163 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + V +          +       +    ++ 
Sbjct: 4   VITYGTFDLLHKGHIRLLKRAKALGDHLTVCVSTDE------FNAIKGKKAYTSFEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  +       G   
Sbjct: 58  ILEAIKYVDEVI-----------PERDWDQKISDVKDHDIDIFVMGDDW------EGQFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L+   +      V++      ++  +S++ I+  L  G    
Sbjct: 101 FLKDYCK-----VVYLP-----RTAGISTTKIKKDLGLGDYKK 133


>gi|218961376|ref|YP_001741151.1| Pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate
           activating enzyme) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730033|emb|CAO80945.1| Pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate
           activating enzyme) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 279

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 64/198 (32%), Gaps = 38/198 (19%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +  NI+  Q + N+       G V  +G F   H GH  ++ +A K      ITV+S 
Sbjct: 1   MQIIDNIQAMQEIGNNWSAGKKIGFVPTMGYF---HQGHLSLVAEANKQCE---ITVVSI 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +              ++L K     +    F+        + +   V VE 
Sbjct: 55  FVNPSQFGPNEDFESYPRDMQRDLELLSKYKVDYV----FSPNPEQMYPQDYRTWVEVEG 110

Query: 116 L--------------EVKTV------ITGTKFRF-GKDRAGDRGILQKRGEKYGFHTVFI 154
           L               V TV      I    F F G+       +LQ   +     T  +
Sbjct: 111 LSSILCGASRPGHFRGVATVILKLINIIKPNFMFMGEKDFQQVTVLQTMLKDLNCETQIV 170

Query: 155 DE--LRNNKSQIVSSSNI 170
               +R      +SS N+
Sbjct: 171 PCPIIREEDGLAMSSRNV 188


>gi|56752220|ref|YP_172921.1| cytidyltransferase [Synechococcus elongatus PCC 6301]
 gi|81300693|ref|YP_400901.1| bifunctional ADP-heptose synthase [Synechococcus elongatus PCC
           7942]
 gi|56687179|dbj|BAD80401.1| probable cytidyltransferase [Synechococcus elongatus PCC 6301]
 gi|81169574|gb|ABB57914.1| RfaE bifunctional protein, domain II [Synechococcus elongatus PCC
           7942]
          Length = 173

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 12/88 (13%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSS 67
           P+  +  V+  G FD +H GH   L+ A  +        NS  +V    P P        
Sbjct: 18  PDRWRPLVLTNGCFDLLHAGHVRYLQAARNLGRSLVIGLNSDASVRGIKPQPE-----GQ 72

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYK 94
           P   + P   + ++L  +G   A++ + 
Sbjct: 73  PPRPIVPEQERAEVLAALGAVDAVVLFN 100


>gi|159482078|ref|XP_001699100.1| riboflavin biosynthesis protein [Chlamydomonas reinhardtii]
 gi|158273163|gb|EDO98955.1| riboflavin biosynthesis protein [Chlamydomonas reinhardtii]
          Length = 363

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 84  KMGFSALIRY---KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
             G   ++R     F       S E+F+  +  + L    V+ G  +RFG   AGD G L
Sbjct: 64  DCGAGRVVRLRTMPFGQ-IRGMSPEEFVALLARD-LGAAGVVAGRNYRFGFKAAGDAGAL 121

Query: 141 QKRGEKYGFHTVFIDEL 157
            + G +YG     +D +
Sbjct: 122 VRLGAQYGLKVSIVDLV 138


>gi|213162791|ref|ZP_03348501.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 38

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 224 GVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESF 261
           GVYA+      + +  GVAN G  PT+       LE  
Sbjct: 2   GVYAVEVLGLGEKALPGVANIGTRPTVAGISQ-QLEVH 38


>gi|289670399|ref|ZP_06491474.1| bifunctional riboflavin kinase/FMN adenylyltransferase
          [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 49

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 3  VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI 50
          +F ++E     P+   G VV IG FDG+HLGH  +++ A+  A    +
Sbjct: 4  LFRDVEGGTLFPH---GSVVCIGAFDGLHLGHRTLVQHAVARARALGV 48


>gi|15606564|ref|NP_213944.1| glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5]
 gi|2983785|gb|AAC07343.1| glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5]
          Length = 168

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 60/162 (37%), Gaps = 35/162 (21%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           N     V+  G FD  H+GH  +L++A  + +   + V +          +     ++ P
Sbjct: 2   NKKGKVVITYGTFDLFHIGHLNLLKRAKALGDFLIVGVSTDE------FNAIKGKKSVYP 55

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKD 132
              + +I+  +     +I               + QK+  ++   V   + G  ++    
Sbjct: 56  YEHRAEIVRSIKYVDLVI-----------PERNWEQKIEDIKKYNVDVFVMGDDWK---- 100

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             G    L++         V++      +++ +S++ ++ AL
Sbjct: 101 --GKFDYLKEYC-----EVVYLP-----RTEGISTTELKEAL 130


>gi|270291073|ref|ZP_06197296.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           7_4]
 gi|304385353|ref|ZP_07367698.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           DSM 20284]
 gi|270280469|gb|EFA26304.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           7_4]
 gi|304328560|gb|EFL95781.1| glycerol-3-phosphate cytidylyltransferase [Pediococcus acidilactici
           DSM 20284]
          Length = 134

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 62/163 (38%), Gaps = 35/163 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ ++  + + +          +       +P   ++ 
Sbjct: 4   VITYGTFDLLHKGHVRLLKRARELGDHLTVCLSTDE------FNAVKGKKAYTPYEDRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  ++      G   
Sbjct: 58  ILEAIKYVDEVI-----------PERGWDQKINDVKENDIDIFVMGDDWK------GQFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L+   +      +++      +++ +S++ I+  L  G    
Sbjct: 101 FLKDYCK-----VIYLP-----RTEGISTTKIKRDLGLGDYKK 133


>gi|239933058|ref|ZP_04690011.1| bifunctional synthase/transferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291441409|ref|ZP_06580799.1| bifunctional synthase/transferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344304|gb|EFE71260.1| bifunctional synthase/transferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 360

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +LE A +I +     V+  N    ++ +   P   L+P  
Sbjct: 215 GGTVVATGGCFDLVHAGHVGLLESARRIGD---CLVVCLNSD-ASVARRKGPGRPLNPAV 270

Query: 77  IQEKILEKMG-FSALIRYKFT---LETANYSAEQFIQ 109
            + ++L  +G   A++ ++        A    + +++
Sbjct: 271 DRARVLAALGSVDAVVVFEEDTPEAVLARLRPDVWVK 307


>gi|325002942|ref|ZP_08124054.1| hypothetical protein PseP1_29445 [Pseudonocardia sp. P1]
          Length = 51

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 3  VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ 40
          V+H ++    +P      VVA+G FDG+H GH  I+  
Sbjct: 17 VWHGVD---EVPAGSGPCVVALGVFDGLHRGHRRIVAT 51


>gi|294888092|ref|XP_002772346.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239876465|gb|EER04162.1| Riboflavin kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 111

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 17/103 (16%)

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTL-GFPTANMQLSPDILLKE------GVYAIRFR 231
           +    HLL     +   V  G   G  L G+PTAN+      + +       GVY    +
Sbjct: 8   ITRVLHLLEPPARLTGIVASGFGRGSKLLGYPTANITSDSPAVAQFLEAAETGVYLGFAQ 67

Query: 232 T----------QDQTSYSGVANFGRNPTMVPNGPLLLESFIFD 264
                       D+  +    + G NP+       L+E++I  
Sbjct: 68  VRYAKECSASKGDREVHPTALSVGVNPSFNDVKEKLVEAYIMH 110


>gi|167768504|ref|ZP_02440557.1| hypothetical protein CLOSS21_03063 [Clostridium sp. SS2/1]
 gi|317498726|ref|ZP_07957016.1| glycerol-3-phosphate cytidylyltransferase [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167710028|gb|EDS20607.1| hypothetical protein CLOSS21_03063 [Clostridium sp. SS2/1]
 gi|291560471|emb|CBL39271.1| Glycerol-3-phosphate cytidylyltransferase [butyrate-producing
           bacterium SSC/2]
 gi|316893961|gb|EFV16153.1| glycerol-3-phosphate cytidylyltransferase [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 136

 Score = 50.2 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + V +          +            ++K
Sbjct: 4   VITYGTFDLLHAGHINLLRRAKELGDYLIVVVST-----DEFNWNEKQKKCYFSYEERKK 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++E +     +I             E + QK+  V+   V T + G  ++      G   
Sbjct: 59  LVEAVRYVDLVI-----------PEENWDQKISDVKEYHVDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      +++ +S++ I+  L
Sbjct: 102 FLKDYC-----EVVYLP-----RTEGISTTKIKQDL 127


>gi|257055174|ref|YP_003133006.1| cytidyltransferase-related enzyme [Saccharomonospora viridis DSM
           43017]
 gi|256585046|gb|ACU96179.1| cytidyltransferase-related enzyme [Saccharomonospora viridis DSM
           43017]
          Length = 484

 Score = 50.2 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 29/190 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
            E  + +       V   G FD +H GH  +L+QA  + +   + V S +   R +    
Sbjct: 317 FEFGEHVRRRGDRLVATGGCFDLLHAGHVSLLKQARALGDALVVCVNS-DESVRRLKGPG 375

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+    P + + ++L ++    +++ +           E+     ++E L     + G 
Sbjct: 376 RPVV---PAADRARLLAELSCVDSVVVF-----------EESTPSAVLERLRPDVWVKGG 421

Query: 126 KFRFGKDRAGDRGILQ-KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
            +        D  + + +   ++G   V +  L        S++ +     +        
Sbjct: 422 DY-------ADDELPEAEVVRRHGGEVVLVPTL-----DGYSTTRLLQEALRRPRATVHD 469

Query: 185 LLGYRFTIES 194
             G+      
Sbjct: 470 GRGWAPGTIG 479


>gi|323141605|ref|ZP_08076488.1| putative glycerol-3-phosphate cytidylyltransferase
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413947|gb|EFY04783.1| putative glycerol-3-phosphate cytidylyltransferase
           [Phascolarctobacterium sp. YIT 12067]
          Length = 138

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 54/154 (35%), Gaps = 29/154 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  +L+ A  + +   + V + +     ++        + P   + +I+  
Sbjct: 8   GVFDLFHIGHLNLLKNAKGLCDKLIVGV-TVD----ELVAYKGKKAMI-PFEDRLEIVRS 61

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           +    A++             +  + K+ + + L    +  G                + 
Sbjct: 62  IKYVDAVV------------PQYDMDKLTMCKKLGASVLFVGDDCY-------GTEKWKN 102

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +++    + I  +    ++ +SS+ I  AL  
Sbjct: 103 YEKEFEKEGIKI--IYFPYTKGISSTQISKALLA 134


>gi|258593269|emb|CBE69608.1| Cytidyltransferase-related domain [NC10 bacterium 'Dutch sediment']
          Length = 163

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 38/169 (22%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           +  V   G FD +H GH  +L+QA  + +      NS  +V         +++  S    
Sbjct: 26  ERTVFTNGCFDLLHRGHTRLLQQARALGDLLIVGLNSDASV--------RLLKGPSRPVL 77

Query: 72  LSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           L     + ++L  +     ++ +           E+     ++  LE   ++ G  +   
Sbjct: 78  L--QDERAELLSALASVDYVVIF-----------EEADPSCVIAALEPDVLVKGADWAM- 123

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +D  G     ++  E+ G   V I  +        +S  +R  +    +
Sbjct: 124 EDVVG-----RETVERCGGLVVTIPLVEG----CSTSRIVRRIMEMTRL 163


>gi|212224402|ref|YP_002307638.1| glycerol-3-phosphate cytidylyltransferase [Thermococcus onnurineus
           NA1]
 gi|327488426|sp|B6YXC8|RIBL_THEON RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|212009359|gb|ACJ16741.1| glycerol-3-phosphate cytidylyltransferase [Thermococcus onnurineus
           NA1]
          Length = 150

 Score = 49.8 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 22/161 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +H+GH   L QA  + +   + V     H  T+ +       ++P   + +
Sbjct: 11  VLAGGVFDLLHVGHIHFLSQAKSLGDELVVIVA----HDETV-RMQKRREPVNPAEDRAE 65

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     +             +   I   LV  +    V  G   RF  +R      
Sbjct: 66  LLRALKMVDEVYI----------GSPGTIDYELVRKINPDIVAIGPDQRFSCER------ 109

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           L++   K+G ++  I      K     +S I   + + +  
Sbjct: 110 LKEELRKHGINSEVIRIPYLYKEDRAKTSKIIQRIVETYCE 150


>gi|125574635|gb|EAZ15919.1| hypothetical protein OsJ_31340 [Oryza sativa Japonica Group]
          Length = 423

 Score = 49.8 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 35/266 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 75  GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 128

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 129 LKWVDEVIPNAPYEITEEFMNT---------LFNKYNIDYIIHGDDPCLLPDGTDAYALA 179

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKGHVLNAAHL--LGYRFTIESDVI 197
           +K G                +++ VSS++I    L       A  +              
Sbjct: 180 KKVGRYKQIK----------RTEGVSSTDIVGRILLTFKQKEAGSMETTTDANQNTGATC 229

Query: 198 HGEKIGRTLGFPTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              K   +   PT+   MQ S       G   +         ++G               
Sbjct: 230 DKVKSQLSNFLPTSRRIMQFSNGQAPSPGARVVYIDGAFDLFHAGHVEI-LRSARQLGDF 288

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDY 281
           LL+        ++  G R  +   + 
Sbjct: 289 LLVGVHDDQAIRDRRGYRPIMHLHER 314


>gi|115481800|ref|NP_001064493.1| Os10g0387000 [Oryza sativa Japonica Group]
 gi|78708489|gb|ABB47464.1| Cytidylyltransferase family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113639102|dbj|BAF26407.1| Os10g0387000 [Oryza sativa Japonica Group]
          Length = 425

 Score = 49.8 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 35/266 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 77  GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 130

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 131 LKWVDEVIPNAPYEITEEFMNT---------LFNKYNIDYIIHGDDPCLLPDGTDAYALA 181

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKGHVLNAAHL--LGYRFTIESDVI 197
           +K G                +++ VSS++I    L       A  +              
Sbjct: 182 KKVGRYKQIK----------RTEGVSSTDIVGRILLTFKQKEAGSMETTTDANQNTGATC 231

Query: 198 HGEKIGRTLGFPTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              K   +   PT+   MQ S       G   +         ++G               
Sbjct: 232 DKVKSQLSNFLPTSRRIMQFSNGQAPSPGARVVYIDGAFDLFHAGHVEI-LRSARQLGDF 290

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDY 281
           LL+        ++  G R  +   + 
Sbjct: 291 LLVGVHDDQAIRDRRGYRPIMHLHER 316


>gi|167749326|ref|ZP_02421453.1| hypothetical protein EUBSIR_00278 [Eubacterium siraeum DSM 15702]
 gi|167657717|gb|EDS01847.1| hypothetical protein EUBSIR_00278 [Eubacterium siraeum DSM 15702]
          Length = 158

 Score = 49.8 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I VLS +        +           I+++
Sbjct: 32  VITYGTFDLLHYGHIELLKRAKALGDYL-IVVLSTD----EFNWNEKQKKCYFSYEIRKQ 86

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QK+  V+   V T + G  ++      G   
Sbjct: 87  LLEAIRYVDLVI-----------PETCWDQKISDVKEYHVDTFVMGDDWK------GKFD 129

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            L++         V++      ++  +S++ I+  L+  
Sbjct: 130 FLKEYC-----EVVYLP-----RTPEISTTQIKHDLSDK 158


>gi|313901281|ref|ZP_07834768.1| glycerol-3-phosphate cytidylyltransferase [Clostridium sp. HGF2]
 gi|312953889|gb|EFR35570.1| glycerol-3-phosphate cytidylyltransferase [Clostridium sp. HGF2]
          Length = 130

 Score = 49.8 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 36/160 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++A  + +   + V S +                     + K
Sbjct: 4   VITYGTFDLFHIGHLNLLKRAKALGDYLIVAVSSDD----------------FNLREKGK 47

Query: 81  ILEKMGFSALIR---YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +      +      ++  E          +K+ V+  +V   + G  +       G  
Sbjct: 48  VCQIKDVDRMEIVKAIRYVDEVI-LEENWEQKKLDVQKYDVDVFVMGDDW------EGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             L++         V++      +++ +SS+ I++ L + 
Sbjct: 101 DFLKEYC-----EVVYLP-----RTEGISSTMIKSELKQK 130


>gi|187736234|ref|YP_001878346.1| cytidyltransferase-related domain protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187426286|gb|ACD05565.1| cytidyltransferase-related domain protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 451

 Score = 49.4 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 30/156 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD +H GH  +L++A K+ +   + V +      +  QS   +  +     +
Sbjct: 2   KTVITYGTFDLLHTGHVNLLKRARKLGDRLIVGVTT-----DSYDQSRGKLNVMESLEER 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + + K G + LI              +  +   +        + G+ +      +G   
Sbjct: 57  MENVRKTGLADLII---------KEELEGQKIHDIRKYGADVFVIGSDW------SGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   E           +   +++ VSS+++R+A 
Sbjct: 102 YLRDYCEV----------VYLERTKGVSSTDLRSAR 127


>gi|218767983|ref|YP_002342495.1| pantoate--beta-alanine ligase [Neisseria meningitidis Z2491]
 gi|9978473|sp|P57035|PANC_NEIMA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|121051991|emb|CAM08300.1| putative pantoate--beta-alanine ligase [Neisseria meningitidis
           Z2491]
 gi|319410232|emb|CBY90572.1| pantoate-beta-alanine ligase (pantothenate synthetase; pantoate
           activating enzyme) [Neisseria meningitidis WUE 2594]
          Length = 278

 Score = 49.4 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 LE  G + +           +  ++ +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDEL 157
             +     +L V TV+             FGK       +++   E   F      +D  
Sbjct: 114 CGKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RAEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|325203944|gb|ADY99397.1| pantoate--beta-alanine ligase [Neisseria meningitidis M01-240355]
          Length = 278

 Score = 49.4 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +L V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|218184434|gb|EEC66861.1| hypothetical protein OsI_33354 [Oryza sativa Indica Group]
          Length = 351

 Score = 49.4 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 35/266 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 3   GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 56

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 57  LKWVDEVIPNAPYEITEEFMNT---------LFNKYNIDYIIHGDDPCLLPDGTDAYALA 107

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKGHVLNAAHL--LGYRFTIESDVI 197
           +K G                +++ VSS++I    L       A  +              
Sbjct: 108 KKVGRYKQIK----------RTEGVSSTDIVGRILLTFKQKEAGSMETTTDANQNTGATC 157

Query: 198 HGEKIGRTLGFPTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              K   +   PT+   MQ S       G   +         ++G               
Sbjct: 158 DKVKSQLSNFLPTSRRIMQFSNGQAPSPGARVVYIDGAFDLFHAGHVEI-LRSARQLGDF 216

Query: 256 LLLESFIFDFSQEIYGQRCTVSFFDY 281
           LL+        ++  G R  +   + 
Sbjct: 217 LLVGVHDDQAIRDRRGYRPIMHLHER 242


>gi|325978130|ref|YP_004287846.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178058|emb|CBZ48102.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 388

 Score = 49.4 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 28/154 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  ++++A +  +   + V     HP    +             + +I++ 
Sbjct: 260 GTFDLFHMGHLNLIKRAKEQCDYLIVGV-----HPNAAHKGKKAYI---SFEERLEIVQS 311

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +          +   +  +  +         +  G+ ++ G DR       +K  
Sbjct: 312 --IKYV-----DKAIESLPEDNEVWNI----YHYDKLFVGSDYK-GTDR---FKAYEKYF 356

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           E  G   V+        ++  SS+ +R  +   +
Sbjct: 357 EDKGVEIVYFP-----YTKGTSSTQLRQLIADEN 385


>gi|288905156|ref|YP_003430378.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus
           gallolyticus UCN34]
 gi|288731882|emb|CBI13447.1| putative glycerol-3-phosphate cytidylyltransferase [Streptococcus
           gallolyticus UCN34]
          Length = 388

 Score = 49.4 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 28/154 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  ++++A +  +   + V     HP    +             + +I++ 
Sbjct: 260 GTFDLFHMGHLNLIKRAKEQCDYLIVGV-----HPNAAHKGKKAYI---SFEERLEIVQS 311

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +          +   +  +  +         +  G+ ++ G DR       +K  
Sbjct: 312 --IKYV-----DKAIESLPEDNEVWNI----YHYDKLFVGSDYK-GTDR---FKAYEKYF 356

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           E  G   V+        ++  SS+ +R  +   +
Sbjct: 357 EDKGVEIVYFP-----YTKGTSSTQLRQLIADEN 385


>gi|254172834|ref|ZP_04879508.1| Riboflavin kinase [Thermococcus sp. AM4]
 gi|214032990|gb|EEB73818.1| Riboflavin kinase [Thermococcus sp. AM4]
          Length = 150

 Score = 49.4 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 23/158 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +H+GH   L+QA ++ +   + V     H  T+ + +     ++P   + +
Sbjct: 11  VLAGGVFDILHVGHIHFLKQAKELGDELIVIVA----HDETV-RRNKRRNPINPAEDRAE 65

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L+ +     +             +   I   LV+ +    +  G    F      +   
Sbjct: 66  LLKAIKYVDEVYI----------GSPGGIDFELVKRINPDVIAIGPDQNF------NCEK 109

Query: 140 LQKRGEKYGFHTVFI-DELRNNKSQIVSSSNIRTALTK 176
           L++   ++G     I         +  ++  IR  + +
Sbjct: 110 LKEELRRHGIEAEVIRVPYLYKDDRAKTTKIIRRIVEE 147


>gi|194867183|ref|XP_001972017.1| GG14115 [Drosophila erecta]
 gi|190653800|gb|EDV51043.1| GG14115 [Drosophila erecta]
          Length = 520

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 21/183 (11%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPR 60
           + + +++ P  +   VV  G FD IHLGH       +L    ++      + ++      
Sbjct: 134 SAQQDETQPPKVYPSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMT------ 187

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +  +    + P   +   L +           TL+      +       V+  ++  
Sbjct: 188 ---KGKTLPDLILPVEERIARLREFLMD----IDGTLQYEIVPIDDPFGPTQVDP-DLDM 239

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGH 178
           ++   +   G  +  +    ++  E   F    ++   ++      VSSSNIR  L    
Sbjct: 240 IVVSAETLRGGQKVNEIRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNIRIDLLGTR 299

Query: 179 VLN 181
              
Sbjct: 300 WRR 302


>gi|329756883|gb|AEC04670.1| glycerol-3-phosphate cytidylyltransferase [Pasteurella multocida]
          Length = 136

 Score = 49.0 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 27/153 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  +L+ A  + +   + V + +     ++          P S + +I+  
Sbjct: 8   GVFDLFHIGHLNLLKNAKSMCDKLVVGVTTDD----LVLYKGKRAMI--PFSDRLEIVRS 61

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +    A++  K              +  + + +    +  G  +        D    +  
Sbjct: 62  IKYVDAVVPQK-----------DMDKCTMCQKIGASLLFVGDDWY-------DTDKWKGY 103

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            ++   H V +  +    ++ VSS+ I   L K
Sbjct: 104 EQQLSLHGVKV--IYFPYTEGVSSTKISNVLEK 134


>gi|291556239|emb|CBL33356.1| Glycerol-3-phosphate cytidylyltransferase [Eubacterium siraeum
           V10Sc8a]
          Length = 130

 Score = 49.0 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I VLS +        +           I+++
Sbjct: 4   VITYGTFDLLHYGHIELLKRAKALGDYL-IVVLSTD----EFNWNEKQKKCYFSYEIRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QK+  V+   V T + G  ++      G   
Sbjct: 59  LLEAIRYVDLVI-----------PETCWDQKISDVKEYHVDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            L++         V++      ++  +S++ I+  L+  
Sbjct: 102 FLKEYC-----EVVYLP-----RTPEISTTQIKHDLSDK 130


>gi|297191427|ref|ZP_06908825.1| bifunctional ADP-heptose synthase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297150916|gb|EFH30865.1| bifunctional ADP-heptose synthase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 183

 Score = 49.0 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 21/117 (17%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITV-----LSFNPHPRTIIQSSSPIFT 71
            G VVA G  FD +H GH  +LE A +I +   + V     ++         +   P   
Sbjct: 39  GGTVVATGGCFDLLHAGHVGLLESARRIGDCLIVCVNSDASIT---------RRKGPGRP 89

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYS---AEQFIQ--KVLVEWLEVKTVI 122
           L+P   + ++L  +G   A+  ++     A  S    + +++     VE L    V+
Sbjct: 90  LNPVEDRVRVLAGLGCVDAVAVFEEDTPIALLSRLRPDVWVKGGDYSVEDLPEAGVV 146


>gi|329118289|ref|ZP_08246998.1| glycerol-3-phosphate cytidylyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327465513|gb|EGF11789.1| glycerol-3-phosphate cytidylyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 133

 Score = 49.0 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A  + ++  + V +                   P   +  
Sbjct: 4   ILTYGTFDLLHHGHINLLQRARALGDHLTVAVSTDE------FNLLKNKICTYPFEERAT 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           IL  +     +I           + EQ I    V+   +   + G  ++      G    
Sbjct: 58  ILRAIRYVDEVIP--------EITWEQKIPD--VQNHNIDVFVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+          V++      ++  +S++ I+  L++  
Sbjct: 102 LKDYC-----EVVYLP-----RTPDISTTQIKQILSENK 130


>gi|326332290|ref|ZP_08198570.1| glycerol-3-phosphate cytidylyltransferase [Nocardioidaceae
           bacterium Broad-1]
 gi|325949996|gb|EGD42056.1| glycerol-3-phosphate cytidylyltransferase [Nocardioidaceae
           bacterium Broad-1]
          Length = 143

 Score = 49.0 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 26/152 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  +L QA +  +     V+S       + +++  I    P   + +I+E 
Sbjct: 10  GVFDLFHIGHLNMLRQARERCDTLIAGVVS-----DEVCETTKGIIPTVPLVERLEIVEA 64

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +G   A+   + T +  ++             +    +  G  ++ G ++      L+K+
Sbjct: 65  IGIVDAVYAERTTDKVDSW-----------REVGFTHLFKGDDWK-GTEKG---DALEKK 109

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
               G   ++        +   SS+ +R A+ 
Sbjct: 110 MASVGVEVIYFP-----YTLQTSSTALRKAIA 136


>gi|169333972|ref|ZP_02861165.1| hypothetical protein ANASTE_00364 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258689|gb|EDS72655.1| hypothetical protein ANASTE_00364 [Anaerofustis stercorihominis DSM
           17244]
          Length = 441

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 30/152 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H GH+ IL++A +  +   + V +   +          +      + + +
Sbjct: 4   VITYGTFDLFHKGHYNILKRAKEEGDYLIVGV-TGENYDSE----RGKLSVQDSLTTRIE 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            + K GF+ LI      E      +  I        +V  ++ G+ ++      G    L
Sbjct: 59  NVRKTGFADLIIV---EEYLGQKIQDII------KYDVDVLVIGSDWK------GKFDHL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            K  E               +++ +SS+ IR 
Sbjct: 104 SKYCEVKYLE----------RTKNISSTKIRE 125


>gi|317128615|ref|YP_004094897.1| pantoate/beta-alanine ligase [Bacillus cellulosilyticus DSM 2522]
 gi|315473563|gb|ADU30166.1| pantoate/beta-alanine ligase [Bacillus cellulosilyticus DSM 2522]
          Length = 292

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 38/228 (16%)

Query: 1   MHVFHNIEI------NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +F +I        +    N   G V  +G    +H GH  +L +AI+  +   + VLS
Sbjct: 1   MKIFTSIPALKIWLKDNKSNNASIGYVPTMGF---LHEGHEALLNKAIEEND---LVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI---RYKFTLETANYSAEQFIQKV 111
              +P    ++              ++ +K G  A+     ++     +  SA   +  +
Sbjct: 55  IFVNPLQFGENEDFDRYPKNIEKDIEVAKKYGVDAIFHPSVHEMYP--SEMSATFKVHHM 112

Query: 112 LVEWLEVKT----------------VITGTKFRFGKDRAGDRGILQKRGEKY--GFHTVF 153
            V     K                 ++T  +  FG   A    ++++  + Y      V 
Sbjct: 113 DV-LCGAKRPGHFDGVATVVMKLFGIVTPDRAYFGLKDAQQVAVIERLVKDYHLNIDIVR 171

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           +  +R N     SS N+   LTK     A ++      +++ ++    
Sbjct: 172 VPTVRENDGLAKSSRNV--NLTKSERAEAPYIYKTLLEVKNWILDERC 217


>gi|308177234|ref|YP_003916640.1| glycerol-3-phosphate cytidylyltransferase [Arthrobacter
           arilaitensis Re117]
 gi|307744697|emb|CBT75669.1| glycerol-3-phosphate cytidylyltransferase [Arthrobacter
           arilaitensis Re117]
          Length = 153

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 33/170 (19%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   V+  G FD  H+GH  IL++     +   + V +          +      + P  
Sbjct: 1   MTKTVLTYGTFDLFHIGHLNILKRLKAKGDRLVVGVSTDE------FNAIKGKKPVVPFE 54

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAG 135
            + +I++ + +  L              E + QK   ++  + K    G  ++      G
Sbjct: 55  QRLEIVQSIKYVDL----------AIPEENWAQKRSDIKKYDAKVFGIGEDWK------G 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               L       G     I   R      +S++ ++  L++    +   L
Sbjct: 99  HFDDL-------GDEVEVIYLPRTAG---ISTTEMKRVLSEYDERHVESL 138


>gi|210631856|ref|ZP_03297094.1| hypothetical protein COLSTE_00984 [Collinsella stercoris DSM 13279]
 gi|210159845|gb|EEA90816.1| hypothetical protein COLSTE_00984 [Collinsella stercoris DSM 13279]
          Length = 458

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 37/180 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +LE+A  + +   + V S  F+       +    I    P   +
Sbjct: 4   VITYGTYDHLHRGHVRLLERARSLGDYLIVGVTSDDFD-------KQRGKINVQQPLEER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              +   G    +I  ++          +  +   ++   V     G+ +      AG  
Sbjct: 57  VAAVRATGLADKIIVEEY----------EGQKIDDIKRYGVDVFTVGSDW------AGRF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR-TALTKGHVLNAAHLLGYRFTIESDV 196
             L++              +   +++ VSS+ IR T   +  ++     +   F     V
Sbjct: 101 DYLKEYCRV----------VYLERTRGVSSTEIRSTKRLRCGLVGYTDYMNRVFAECGLV 150


>gi|309777675|ref|ZP_07672625.1| glycerol-3-phosphate cytidylyltransferase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308914579|gb|EFP60369.1| glycerol-3-phosphate cytidylyltransferase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 130

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 36/160 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++A  + +   + V S +                     + K
Sbjct: 4   VITYGTFDLFHIGHLNLLKRAKALGDYLIVAVSSDD----------------FNLREKGK 47

Query: 81  ILEKMGFSALIR---YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           + +      +      ++  E          +K+ V+  +V   + G  +       G  
Sbjct: 48  VCQIKDVDRMEIVKAIRYVDEVI-LEENWEQKKLDVQKYDVDVFVMGDDW------EGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             L++            D +   +++ +SS+ I++ L + 
Sbjct: 101 DFLKEYC----------DVVYLPRTEGISSTMIKSELKQK 130


>gi|154504005|ref|ZP_02041065.1| hypothetical protein RUMGNA_01831 [Ruminococcus gnavus ATCC 29149]
 gi|153795432|gb|EDN77852.1| hypothetical protein RUMGNA_01831 [Ruminococcus gnavus ATCC 29149]
          Length = 132

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 34/159 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A +  +   + + +                       ++K
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKEYGDYLIVALST-----DEFNWDEKRKKCYFTYEQRKK 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK + V+  +V T + G  +       G   
Sbjct: 59  LLEAVRYVDLVI-----------PEENWEQKILDVKKYDVDTFVIGNDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            L+        + V++      ++  +SS+ I+  L K 
Sbjct: 102 FLKDLC-----NVVYLP-----RTPEISSTQIKEELKKK 130


>gi|89053310|ref|YP_508761.1| glycerol-3-phosphate cytidylyltransferase [Jannaschia sp. CCS1]
 gi|88862859|gb|ABD53736.1| Glycerol-3-phosphate cytidylyltransferase [Jannaschia sp. CCS1]
          Length = 187

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 64/174 (36%), Gaps = 36/174 (20%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L   ++  G FD  H+GH  +L++   + ++  + V +          +     T+ P  
Sbjct: 36  LGKRIITYGTFDLFHIGHVRLLKRLADLGDHLTVCVSTDE------FNAVKGKKTVVPYD 89

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+       A++  +          EQ    ++ E +++        F  G D +G
Sbjct: 90  QRAEIVAACQYVDAVLPEE--------DWEQKRDDIVREKIDI--------FAMGDDWSG 133

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR---TALTKGHVLNAAHLL 186
               L    E +             +++ VSS++++    AL    +    HL+
Sbjct: 134 TFNDLSDICEVF----------YLPRTEDVSSTSLKSFMEALRDEQLKEVKHLI 177


>gi|294462786|gb|ADE76937.1| unknown [Picea sitchensis]
          Length = 390

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 67/203 (33%), Gaps = 46/203 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V+ + E    +P   +  +++ G+F+ +H GH  +LE A  I+ +       F     
Sbjct: 197 MKVY-SFEKGIHVPKSGRRVILS-GSFNPLHEGHLKLLEVASSISKDGFPC---FE---I 248

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALI-----------RYKFTLET-------ANY 102
           + I +  P  TL     + K  E +G + +I                          A  
Sbjct: 249 SAINADKPPLTLKQIKDRVKQFEAVGKTVIITNQPYFYKKAEVLP-DSTFIIGADTAARL 307

Query: 103 ---------SAEQFIQKVLVEWLEVKTVITGT--KFRFGKDRAGDRGILQKRGEKYGFHT 151
                    S       + V+ L    ++ G      F      D  + ++  + +    
Sbjct: 308 IDPKYYDNNSERMLEVLLGVKQLGCNFLVGGRIVDDTF--KVLSDFDVPEQLRDMF---- 361

Query: 152 VFIDELRNNKSQIVSSSNIRTAL 174
           + I E        +SS+ IR  L
Sbjct: 362 LSIPE--GLFRMDISSTEIRAKL 382


>gi|225175794|ref|ZP_03729787.1| phosphoenolpyruvate phosphomutase [Dethiobacter alkaliphilus AHT 1]
 gi|225168718|gb|EEG77519.1| phosphoenolpyruvate phosphomutase [Dethiobacter alkaliphilus AHT 1]
          Length = 432

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 18/126 (14%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           IH GH  ++ +A ++     + VL+       +I        LS    +E I    G   
Sbjct: 13  IHHGHINVINKAKELG-EVTVGVLT-----DEVIAGYKRFPLLSFEERKEIIANLKGVDH 66

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           +I               ++  +  + L+   V+ G  ++ G+ R     +++    ++G 
Sbjct: 67  VI---------AQETLDYVPNL--QKLKPDYVVHGDDWKTGEQRCVREKVIEAL-RQWGG 114

Query: 150 HTVFID 155
             V + 
Sbjct: 115 KLVEVP 120


>gi|163734924|ref|ZP_02142361.1| glycerol-3-phosphate cytidylyltransferase [Roseobacter litoralis
           Och 149]
 gi|161391706|gb|EDQ16038.1| glycerol-3-phosphate cytidylyltransferase [Roseobacter litoralis
           Och 149]
          Length = 147

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 26/157 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V  +G FD +H+GH  +L     + +   + V S       ++    P   + P   + +
Sbjct: 3   VYTVGTFDLLHVGHLALLNHCKSLGDVLAVGVAS-----DEVVNLYKPNVPVVPLEQRVE 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L+ +     +  Y    E    S    +         V   + G  +            
Sbjct: 58  MLQALSCVDIVRPYH---ELEYVSGCIAVD--------VDIFVIGEDWGTQAHNLDVDAY 106

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++ G++       I ++R N     SS+ I+  +  
Sbjct: 107 LREMGKE-------IAQVRYNPRT--SSTRIKQMVLA 134


>gi|85857668|gb|ABC86369.1| IP11908p [Drosophila melanogaster]
          Length = 529

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 21/183 (11%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPR 60
           + + + + P  +   VV  G FD IHLGH       +L    ++      + ++      
Sbjct: 143 SAQQDDTQPPKVYPSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMT------ 196

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +  +    + P   +   L +           TL+      +       V+  ++  
Sbjct: 197 ---KGKTLPDLILPVEERIARLREFLVD----IDDTLQYEIVPIDDPFGPTQVDP-DLDM 248

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGH 178
           ++   +   G  +  +    ++  E   F    ++   ++      VSSSN R  L    
Sbjct: 249 IVVSAETLRGGQKVNEVRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNTRIDLLGTR 308

Query: 179 VLN 181
              
Sbjct: 309 WRR 311


>gi|24658602|ref|NP_647985.1| bifunctional phosphopantetheine adenylyltransferase - Dephospho-CoA
           kinase [Drosophila melanogaster]
 gi|10728128|gb|AAF50749.2| bifunctional phosphopantetheine adenylyltransferase - Dephospho-CoA
           kinase [Drosophila melanogaster]
          Length = 518

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 21/183 (11%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPR 60
           + + + + P  +   VV  G FD IHLGH       +L    ++      + ++      
Sbjct: 132 SAQQDDTQPPKVYPSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMT------ 185

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +  +    + P   +   L +           TL+      +       V+  ++  
Sbjct: 186 ---KGKTLPDLILPVEERIARLREFLVD----IDDTLQYEIVPIDDPFGPTQVDP-DLDM 237

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGH 178
           ++   +   G  +  +    ++  E   F    ++   ++      VSSSN R  L    
Sbjct: 238 IVVSAETLRGGQKVNEVRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNTRIDLLGTR 297

Query: 179 VLN 181
              
Sbjct: 298 WRR 300


>gi|260584002|ref|ZP_05851750.1| glycerol-3-phosphate cytidylyltransferase [Granulicatella elegans
           ATCC 700633]
 gi|260158628|gb|EEW93696.1| glycerol-3-phosphate cytidylyltransferase [Granulicatella elegans
           ATCC 700633]
          Length = 131

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +         Q             ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKALGDYLIVGLST-----NEFNQKEKNKDCYFDYDKRKS 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  +E       + G  ++      G   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWEQKVSDIEKYHADVFVIGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            L+      G   V++      +++ +S+S I+  L +G
Sbjct: 102 HLEDL----GVEVVYLP-----RTEEISTSKIKKDLNQG 131


>gi|242278351|ref|YP_002990480.1| cytidyltransferase-related domain protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242121245|gb|ACS78941.1| cytidyltransferase-related domain protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 540

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 61/191 (31%), Gaps = 28/191 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGG----VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M   ++I     +    +      V+  G FD +H+GH   +    +        V++  
Sbjct: 37  MSNIYDINTLSEIMEKRRNAGDSIVLCHGVFDLLHIGH---IRYLRQAKQFGNCLVVTLT 93

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P        + P F      ++ + L+ +     +              E    +  +  
Sbjct: 94  PDKYVDKGPNRPAF---TEQLRAEALDSLELVDYVAI-----------NEWPTAENTLRK 139

Query: 116 LEVKTVITGTKFRF-GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+      G++F+    D  G   +     ++ G   VF +++        SS+ I   L
Sbjct: 140 LKPTFYAKGSEFKDIENDPTGKIKLEAAAAKEVGTELVFTEDI-----VFSSSNLINRYL 194

Query: 175 TKGHVLNAAHL 185
                  A +L
Sbjct: 195 NVYPQELANYL 205


>gi|212697016|ref|ZP_03305144.1| hypothetical protein ANHYDRO_01581 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675986|gb|EEB35593.1| hypothetical protein ANHYDRO_01581 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 138

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 35/155 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A  + +   + + +                T      ++K
Sbjct: 4   VITYGTFDLLHYGHINLLERAKALGDYLIVAIST-----DEFNSKEKNKKTYFSFEQRKK 58

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I            AE+   +    V   +V T + G  ++      G  
Sbjct: 59  LLEALRCVDLVI------------AEENWDQKKSDVHLYQVDTFVMGDDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L    E+ G   V++      ++  +S+S I+ 
Sbjct: 101 DFL----EEEGVEVVYLP-----RTPEISTSQIKK 126


>gi|148709607|gb|EDL41553.1| riboflavin kinase, isoform CRA_a [Mus musculus]
          Length = 88

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 185 LLGYRFTIESDVIHGEKIGRT-LGFPTANM-QLSPDILLKE---GVYAIRFRTQDQTSYS 239
           +    F     V+ G   G   LG PTAN  +   D L  +   G+Y           + 
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60

Query: 240 GVANFGRNPTMVPNGPLLLESF 261
            V + G NP        ++ + 
Sbjct: 61  MVVSIGWNPYYKNVKKSMVRTH 82


>gi|121634646|ref|YP_974891.1| pantoate--beta-alanine ligase [Neisseria meningitidis FAM18]
 gi|158706030|sp|A1KTB2|PANC_NEIMF RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|120866352|emb|CAM10095.1| putative pantoate--beta-alanine ligase [Neisseria meningitidis
           FAM18]
          Length = 278

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++++E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYSVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +L V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|221133898|ref|ZP_03560203.1| pantoate--beta-alanine ligase [Glaciecola sp. HTCC2999]
          Length = 282

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 16/130 (12%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M     I+  + +    +      G V  +GN   +H GH  ++E A + A+   I V+S
Sbjct: 1   MQTISTIDGLREIRREWQLAGKSIGFVPTMGN---LHAGHLSLVEAAKEHAD---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                    + L K+G   L    FT            Q+  VE
Sbjct: 55  IFVNPLQFGADEDLDNYPRTLEADSEHLSKLGVDVL----FTPSVEAIYPRGLEQQTFVE 110

Query: 115 WLEVKTVITG 124
              +  +I G
Sbjct: 111 VPGISYMICG 120


>gi|308270455|emb|CBX27067.1| Bifunctional protein hldE [uncultured Desulfobacterium sp.]
          Length = 485

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 35/174 (20%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
            L N  K  V   G FD +H GH  +   A K   +  I  +  +   + +  +  P+  
Sbjct: 341 DLKNKGKKIVFTNGCFDLLHAGHIKLFS-ASKKEGDVLIVAIDDDASVKKLKGNGRPVI- 398

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-- 128
                 + +IL  +     ++ +                K L+E +    +  G+ +   
Sbjct: 399 --NAKERVRILSALDSVDYIVVFPENK-----------LKDLIETIRPDVLTKGSNYSAK 445

Query: 129 --FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
             +G D            EKYG   V I        + +S+++I  ++ K    
Sbjct: 446 EVYGHD----------LVEKYGGRVVIIQV-----KENISATSIIDSIRKSDPA 484


>gi|288932037|ref|YP_003436097.1| cytidyltransferase-related domain protein [Ferroglobus placidus DSM
           10642]
 gi|327488393|sp|D3RZA9|RIBL_FERPA RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|288894285|gb|ADC65822.1| cytidyltransferase-related domain protein [Ferroglobus placidus DSM
           10642]
          Length = 152

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 49/155 (31%), Gaps = 25/155 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD IH GH   LE+A K+ +   + V                   + P   + +
Sbjct: 4   VVATGTFDIIHPGHVRFLEEAKKLGDYLVVIV-------AREKNVKHKPKPIMPEEQRRR 56

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E +      I                     +E ++   +  G    F      D   
Sbjct: 57  VVEALKPVDEAILGDEEDIFK-----------PIEKIKPDVIALGYDQHF------DEEW 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L++   K G     +        ++ SS+ I   +
Sbjct: 100 LREELRKRGIKAEVVRIRAKEDCELCSSAKIIERI 134


>gi|260907573|ref|ZP_05915895.1| Glycerol-3-phosphate cytidylyltransferase [Brevibacterium linens
           BL2]
          Length = 129

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++  +  +   +  LS +        +     +      ++ 
Sbjct: 4   VITYGTFDLLHYGHIRLLQRCKEQGDYL-VVALSSDE-----FNAGKGKKSYFSYEERKH 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E   ++    VE   + T + G  +       G+ 
Sbjct: 58  MLEAIRYVDLVI------------PEDSWEQKSTDVEKYHIDTFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L+ +        V++      ++  +S++ I++ L
Sbjct: 100 DFLKDKC-----EVVYLP-----RTPEISTTRIKSEL 126


>gi|261392776|emb|CAX50352.1| pantoate--beta-alanine ligase (pantothenate synthetase; pantoate
           activating enzyme) [Neisseria meningitidis 8013]
          Length = 278

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 64/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLELVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +L V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|329939468|ref|ZP_08288804.1| pantoate-amino acid ligase [Streptomyces griseoaurantiacus M045]
 gi|329301697|gb|EGG45591.1| pantoate-amino acid ligase [Streptomyces griseoaurantiacus M045]
          Length = 361

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 56/204 (27%), Gaps = 29/204 (14%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
           H    +   +++P    G V+ +G    +H GH  ++  A        + V++   +P  
Sbjct: 22  HDLSRLRAERAVPGSTTGVVMTMG---ALHEGHATLVRAARARVGAEGLVVVTVFVNPLQ 78

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLETANYSA----------- 104
                              + E  G   +        Y         SA           
Sbjct: 79  FGAGEDLDRYPRTLEADLAVAEAAGADLVFAPSAEEVYPGGEPQVRLSAGPMGGRLEGAV 138

Query: 105 ----EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
                  +  V+ + L +          +G+  A    ++++      F      +  +R
Sbjct: 139 RPGHFDGMLTVVAKLLHLTRPDVAF---YGQKDAQQLALIRRMVRDLNFGVDIVGVPTVR 195

Query: 159 NNKSQIVSSSNIRTALTKGHVLNA 182
                 +SS N   +  +     A
Sbjct: 196 EADGLALSSRNRYLSAAERRTALA 219


>gi|327400814|ref|YP_004341653.1| cytidyltransferase-related domain-containing protein [Archaeoglobus
           veneficus SNP6]
 gi|327316322|gb|AEA46938.1| cytidyltransferase-related domain protein [Archaeoglobus veneficus
           SNP6]
          Length = 163

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 23/165 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD IH GH   L++A K+ +   + V                   + P   + +
Sbjct: 4   VIATGTFDIIHPGHIRFLKEAKKLGDELIVIV-------AREKNVRHKPKPIIPEEQRRR 56

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++E  G   +              + F   +    L+   +  G    F      +   L
Sbjct: 57  VVE--GIKYV-----DKAILGDEEDMFKPIME---LKPDIIALGYDQHF------NEKWL 100

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           ++   K G +T  +      + +  SS+ I   + +         
Sbjct: 101 EEELRKRGLNTKVVRIAAKEECEFCSSTKIIKRVAEIAKKRVEEY 145


>gi|289580184|ref|YP_003478650.1| cytidyltransferase [Natrialba magadii ATCC 43099]
 gi|289529737|gb|ADD04088.1| cytidyltransferase-related domain protein [Natrialba magadii ATCC
           43099]
          Length = 173

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFN---PHPRTIIQSSSPI-FTLSPP 75
           VA+G  FD +H GH  + E+A ++ +   +TV L+ +   P  R + +   P     +  
Sbjct: 3   VALGGTFDPVHDGHRRLFERAFELGD---VTVGLTSDELAPQTRHVERRVRPFDERRNDL 59

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
           + + + +    +      +   E    + E+              ++   + + G +R  
Sbjct: 60  ADELESIANE-YDRSFEIRTLEEPTGIATEEPFD----------YLVVSPETKAGGER-- 106

Query: 136 DRGILQKRGEKYGF---HTVFIDELRNNKSQIVSSSNI-RTALTKG 177
               + +   + G+     + +  LR +   I+SS+ I R  + + 
Sbjct: 107 ----INEIRRERGYDPLEVIVVPHLRADDGDIISSTRIVRGEIDEH 148


>gi|153007771|ref|YP_001368986.1| pantoate--beta-alanine ligase [Ochrobactrum anthropi ATCC 49188]
 gi|189036425|sp|A6WW03|PANC_OCHA4 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|151559659|gb|ABS13157.1| pantoate--beta-alanine ligase [Ochrobactrum anthropi ATCC 49188]
          Length = 289

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  + +    +        V  +G    +H GH  ++ ++    +   +TV+S
Sbjct: 1   MQIIRTIEELRQILAPARRAGKRIGFVPTMGY---LHKGHLELVHRSRAEND---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L +     L    F    ++   +     V V 
Sbjct: 55  IFVNPLQFGANEDLDKYPRDLERDAALLHRADVDYL----FAPAVSDMYPQPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HT 151
            L               V TV+       G     FG+       I+++  E        
Sbjct: 111 TLGNQMEGEARPGHFAGVATVVNKLFNIVGADAAYFGEKDFQQLVIIRRMVEDMAIPVRV 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R       SS N+
Sbjct: 171 VGVETVREEDGLACSSRNV 189


>gi|326202066|ref|ZP_08191936.1| pantoate/beta-alanine ligase [Clostridium papyrosolvens DSM 2782]
 gi|325987861|gb|EGD48687.1| pantoate/beta-alanine ligase [Clostridium papyrosolvens DSM 2782]
          Length = 281

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 83/289 (28%), Gaps = 62/289 (21%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLS 54
           M V  NI   +++ N  K     IG    +      H GH  +    +K   NS + V  
Sbjct: 1   MKVVKNISEVKNIVNEWKQQGCTIGF---VPTMGYLHEGHGSL---VVKAMENSKVVVSI 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F   P     +              K  +++G   +    F  E      E +   V + 
Sbjct: 55  FVN-PMQFGPTEDLDKYPRDLEKDSKYCKELGVDLI----FNPEPGEMYPEGYCTSVDIS 109

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V TV+             FG+  A    I+++  +    +   
Sbjct: 110 GLSEELCGLSRPVHFKGVCTVVNKLLNIVNPDKAYFGEKDAQQLAIIRRMVKDLSMNVEI 169

Query: 154 I--DELRNNKS-------QIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
           +    +R             +SS   R AL     + A   +      E D++  +    
Sbjct: 170 VGCPIIREKDGLAKSSRNTYLSSEERRAALALSKSIFAGKDMVKEGCREVDILLKKMKDI 229

Query: 205 TLGFPTANMQ---------------LSPDILLKEGVYAIRFRTQDQTSY 238
               P A +                +   +L+   VY  + R  D  S+
Sbjct: 230 INEEPLARIDYLKAVDAMTMQQVDTIDRPVLIAMAVYIGKVRLIDNFSF 278


>gi|152991000|ref|YP_001356722.1| glycerol-3-phosphate cytidyltransferase [Nitratiruptor sp. SB155-2]
 gi|151422861|dbj|BAF70365.1| glycerol-3-phosphate cytidyltransferase [Nitratiruptor sp. SB155-2]
          Length = 152

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 55/157 (35%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++A  + +   + V +                   P   + +
Sbjct: 4   VLTYGTFDMFHIGHLNLLKRAKALGDELYVGVSTDE------FNKLKNKDIFIPYEDRVE 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I++      +            S EQ I+   ++   +   + G+ ++      G    L
Sbjct: 58  IVKS--IRYV-----DFVFPENSWEQKIED--IKKYNINIFVMGSDWK------GKFDYL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           Q+  +           +   ++  +S++ ++  L K 
Sbjct: 103 QQYCQV----------VYLERTDNISTTLLKDRLKKY 129


>gi|304387814|ref|ZP_07369988.1| pantoate-beta-alanine ligase [Neisseria meningitidis ATCC 13091]
 gi|304338079|gb|EFM04215.1| pantoate-beta-alanine ligase [Neisseria meningitidis ATCC 13091]
          Length = 278

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+     V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLELVREAKKRAD---SVVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 LE  G + +           +  ++ +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDEL 157
             +     +L V TV+             FGK       +++   E   F      +D  
Sbjct: 114 CGKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RAEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|18309465|ref|NP_561399.1| glycerol-3-phosphate cytidyltransferase [Clostridium perfringens
           str. 13]
 gi|182624622|ref|ZP_02952404.1| glycerol-3-phosphate cytidylyltransferase [Clostridium perfringens
           D str. JGS1721]
 gi|18144142|dbj|BAB80189.1| probable glycerol-3-phosphate cytidyltransferase [Clostridium
           perfringens str. 13]
 gi|177910226|gb|EDT72614.1| glycerol-3-phosphate cytidylyltransferase [Clostridium perfringens
           D str. JGS1721]
          Length = 140

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 26/153 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  I+++A +  N   + V +       ++Q       + P   + +I+
Sbjct: 9   TTGVFDMFHIGHLNIIKRAKEQCNYLIVGVST-----DELVQEYKNKKPIIPFYERCEIV 63

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           + +     ++  +   +   +           + L    +  G  ++        + +  
Sbjct: 64  KALEYVDKVVAQENRDKFWAW-----------KKLNFDVMFVGDDWK-------GKSLFV 105

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +  E+  F  V +D +    ++  SS+ +R  L
Sbjct: 106 EVEEE--FKKVGVDIVYFPYTKDTSSTILREKL 136


>gi|240103901|ref|YP_002960210.1| Cytidylyltransferase [Thermococcus gammatolerans EJ3]
 gi|327488425|sp|C5A1S7|RIBL_THEGJ RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|239911455|gb|ACS34346.1| Cytidylyltransferase [Thermococcus gammatolerans EJ3]
          Length = 151

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 23/158 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH   L+QA ++ +   + V     H  T+ + +     ++P   + +
Sbjct: 12  VLVGGVFDILHVGHVHFLKQAKELGDELVVIVA----HDETV-RRNKRRNPINPAEDRAE 66

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     +             +   I   LV  +    +  G    F      +   
Sbjct: 67  LLRAIRYVDEVYI----------GSPGGIDFELVRRINPDVIAIGPDQNF------NCEK 110

Query: 140 LQKRGEKYGFHTVFI-DELRNNKSQIVSSSNIRTALTK 176
           L++  +++G     I         +  ++  IR  + +
Sbjct: 111 LKEELKRHGIEAEVIRVPYLYKSDRAKTTKIIRRIVEE 148


>gi|259501095|ref|ZP_05743997.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners DSM
           13335]
 gi|302190457|ref|ZP_07266711.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           AB-1]
 gi|309808851|ref|ZP_07702732.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 01V1-a]
 gi|309809358|ref|ZP_07703220.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners SPIN
           2503V10-D]
 gi|325911454|ref|ZP_08173866.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners UPII
           143-D]
 gi|325913354|ref|ZP_08175722.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners UPII
           60-B]
 gi|259167789|gb|EEW52284.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners DSM
           13335]
 gi|308167849|gb|EFO69986.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 01V1-a]
 gi|308170269|gb|EFO72300.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners SPIN
           2503V10-D]
 gi|325476804|gb|EGC79958.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners UPII
           143-D]
 gi|325477457|gb|EGC80601.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners UPII
           60-B]
          Length = 129

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 34/158 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +  + ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVALST-----DEFNELKKHKEAYNSYNERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+   + T + G  ++      G   
Sbjct: 59  ILEAIKYVDEVI-----------PENDWNQKITDVQKYNIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L++       + V++      ++  +S++ I+  L  
Sbjct: 102 FLKEYC-----NVVYLP-----RTPGISTTKIKHDLHN 129


>gi|254718521|ref|ZP_05180332.1| pantoate--beta-alanine ligase [Brucella sp. 83/13]
 gi|265983491|ref|ZP_06096226.1| pantothenate synthetase [Brucella sp. 83/13]
 gi|306838329|ref|ZP_07471175.1| pantoate--beta-alanine ligase [Brucella sp. NF 2653]
 gi|264662083|gb|EEZ32344.1| pantothenate synthetase [Brucella sp. 83/13]
 gi|306406620|gb|EFM62853.1| pantoate--beta-alanine ligase [Brucella sp. NF 2653]
          Length = 293

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 59/199 (29%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +TV+S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGAHEDLDKYPRDLERDADLLRDAQVDYL----FAPAVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|302509608|ref|XP_003016764.1| hypothetical protein ARB_05057 [Arthroderma benhamiae CBS 112371]
 gi|291180334|gb|EFE36119.1| hypothetical protein ARB_05057 [Arthroderma benhamiae CBS 112371]
          Length = 258

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 46/189 (24%), Gaps = 67/189 (35%)

Query: 188 YRFTIESDVIHGEKIGRTLGFPTANMQ---LSPDILLKEGVYAI---------------- 228
               +    +        LG PTAN+    LS    L+ GVY                  
Sbjct: 43  RPAHLCFCPVLWLLFCIALGIPTANIPAETLSEYPDLQLGVYYGVAALDPAQFKHTRTES 102

Query: 229 ----RFRTQDQTSYSGVANFGRNPTMVPNGPLLL----------------------ESFI 262
                        +  V + G NP    N    +                      E  I
Sbjct: 103 DAADEPAHTGTDIFPCVLSIGYNP-FYKNTVRSVVRIHTLLLLPAMINYQLLTESQEIHI 161

Query: 263 ---------------------FDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGED 301
                                F    + YG    +    Y+RPE  +   E L   +  D
Sbjct: 162 LPHLSMESSPIAADTSGQRPLFHHFPDFYGTALNLLILGYIRPEYDYVSREALIDDIRID 221

Query: 302 EKKARKILE 310
              AR+ L+
Sbjct: 222 CDVARRSLK 230


>gi|294623010|ref|ZP_06701899.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           U0317]
 gi|291597566|gb|EFF28728.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           U0317]
          Length = 131

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  IL +A ++ +   + VLS +        +            +++
Sbjct: 4   VITYGTFDLLHYGHINILRRAKELGDYL-VVVLSSD----EFNWNEKQKKCYFTYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QK+  V    + T + G  +       G   
Sbjct: 59  LLESIRYVDLVI-----------PETCWEQKLSDVHEYHIDTFVMGDDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+    + G   V++      ++  +S++ I+  L
Sbjct: 102 FLR----EEGVEVVYLP-----RTPEISTTQIKKDL 128


>gi|309803847|ref|ZP_07697932.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 11V1-d]
 gi|309804717|ref|ZP_07698782.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 09V1-c]
 gi|309805855|ref|ZP_07699890.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 03V1-b]
 gi|312873094|ref|ZP_07733153.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2062A-h1]
 gi|312873400|ref|ZP_07733451.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2052A-d]
 gi|312875082|ref|ZP_07735099.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2053A-b]
 gi|315653847|ref|ZP_07906763.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners ATCC
           55195]
 gi|329920423|ref|ZP_08277155.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners SPIN
           1401G]
 gi|308164081|gb|EFO66343.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 11V1-d]
 gi|308166109|gb|EFO68327.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 09V1-c]
 gi|308167764|gb|EFO69908.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners
           LactinV 03V1-b]
 gi|311089372|gb|EFQ47799.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2053A-b]
 gi|311091084|gb|EFQ49477.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2052A-d]
 gi|311091327|gb|EFQ49712.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           2062A-h1]
 gi|315488543|gb|EFU78189.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners ATCC
           55195]
 gi|328936099|gb|EGG32552.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners SPIN
           1401G]
          Length = 129

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 34/158 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +  + ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVALST-----DEFNEFKKHKEAYNSYNERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+   + T + G  ++      G   
Sbjct: 59  ILEAIKYVDEVI-----------PENDWNQKITDVQKYNIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L++       + V++      ++  +S++ I+  L  
Sbjct: 102 FLKEYC-----NVVYLP-----RTPGISTTKIKHDLHN 129


>gi|268323426|emb|CBH37014.1| probable phosphopantetheine adenylyltransferase [uncultured
           archaeon]
 gi|268324060|emb|CBH37648.1| phosphopantetheine adenylyltransferase [uncultured archaeon]
          Length = 158

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 35/160 (21%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AIG  FD +H GH  +L++A ++     I + ++ +   R         +      I++
Sbjct: 8   IAIGGTFDPLHDGHKKLLKKAYELCEGGEIVIGVTSDKMARANKDRLVLPYNRRAERIRQ 67

Query: 80  KILEKMGFS---------ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            + ++ G +           I     ++    S E ++  + +  L  K          G
Sbjct: 68  HMYKEYGVNVRTMELNDRYGITLDADIDYIVISPETYVIALTINELRKKR---------G 118

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           K+                   V +   +    Q++SS+ I
Sbjct: 119 KN---------------PIKIVKVAHAKAADGQVISSTRI 143


>gi|308062621|gb|ADO04509.1| hypothetical protein HPCU_06825 [Helicobacter pylori Cuz20]
          Length = 171

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++  ++ + VL     P            L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPSAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 69  LK--GIDRVLLSDFEIKQERAVPTIESVIHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IRT+L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDVPISSSAIRTSL 169


>gi|160916212|ref|ZP_02078419.1| hypothetical protein EUBDOL_02239 [Eubacterium dolichum DSM 3991]
 gi|158431936|gb|EDP10225.1| hypothetical protein EUBDOL_02239 [Eubacterium dolichum DSM 3991]
          Length = 131

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 35/161 (21%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  V+  G FD  H+GH  +L++A  + +   + V             SS  F L     
Sbjct: 4   KKTVITYGTFDLFHIGHLNLLKRAKALGDELIVAV-------------SSDEFNLG---- 46

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKFRFGKDRAG 135
           + K+ +      +   +          E   ++    V+   V   + G  ++      G
Sbjct: 47  KGKVCQIKDVDRMAIVEAIRYVDKVIPETCWEQKVEDVQKYNVDVFVMGDDWK------G 100

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               L++         V++      +++ +S++ ++  L K
Sbjct: 101 KFDFLKEYC-----EVVYLP-----RTEGISTTQLKDELKK 131


>gi|307721081|ref|YP_003892221.1| cytidyltransferase-related domain-containing protein [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979174|gb|ADN09209.1| cytidyltransferase-related domain protein [Sulfurimonas
           autotrophica DSM 16294]
          Length = 147

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 26/158 (16%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V  +G FD +H+GH  +LE    + +   + V S       ++ S      + P   + 
Sbjct: 2   TVYTVGTFDLLHVGHLALLEYCKTLGDTFVVGVAS-----DEVVGSYKRNIPVIPLQQRM 56

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++L+ +     ++           S E        E L+V   + G  +           
Sbjct: 57  EMLKALKCVDDVV-----------SYETLEYVSNCEKLDVDIFVIGEDWGSEPHNIAVEE 105

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L+ +G K          ++   + + SS+ I+  +  
Sbjct: 106 YLKSKGAKI---------IQVTYNPLTSSTKIKQNVIA 134


>gi|224543319|ref|ZP_03683858.1| hypothetical protein CATMIT_02519 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523762|gb|EEF92867.1| hypothetical protein CATMIT_02519 [Catenibacterium mitsuokai DSM
           15897]
          Length = 497

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 39/159 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--F---NPHPRTIIQSSSPIFTLSPP 75
           V+  G FD +H GH  +L +A ++ +   + + +  F       +           L   
Sbjct: 371 VITYGTFDLLHYGHINLLRRAKELGDYLIVGLSTDEFNWNEKQKKCYFTYEQRKQLLESV 430

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
              + ++ + G+                     ++  V    V T + G  ++      G
Sbjct: 431 RYVDLVIPECGWDQ-------------------KRKDVHEYHVDTFVMGDDWK------G 465

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               L    E+ G   V++      ++  +S++ I+  L
Sbjct: 466 QFDFL----EEEGAEVVYLP-----RTPEISTTRIKKDL 495


>gi|326505478|dbj|BAJ95410.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519410|dbj|BAJ96704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 418

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 43/230 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 77  GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 130

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 131 LKWVDEVIPNAPYEITEEFMNT---------LFSKYNIDYIIHGDDPCLLPDGTDAYALA 181

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +K G                +++ VSS++I  R   T  H        G        V  
Sbjct: 182 KKAGRYKQIR----------RTEGVSSTDIVGRILQTFKHKEGVNENAG--------VES 223

Query: 199 GEKIGRTL--GFPTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANF 244
            +++   L    PT+   MQ S       G   +         ++G    
Sbjct: 224 CDQMKTQLSNFLPTSRRIMQFSNGQAPSPGARVVYIDGAFDLFHAGHVEI 273


>gi|148977305|ref|ZP_01813919.1| citrate lyase ligase [Vibrionales bacterium SWAT-3]
 gi|145963418|gb|EDK28682.1| citrate lyase ligase [Vibrionales bacterium SWAT-3]
          Length = 605

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
            GH  ++E A +  +   I V+        F    + + +S+  I  ++     + I  +
Sbjct: 433 KGHLHLIEHAARSVDKLFIFVIEEDKSFFKFEDRFKLVFESTKHIGNVTVIRGGKFICTE 492

Query: 85  MGFSALIRYKFTLET------ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +         F  ET      A+  A  F  + + + L +  +  G + +    +  +  
Sbjct: 493 L----TYPDYFDKETSEAKADASMEA-WFFCEYIAKALNISKIFLGNEPKCQITQQYNEK 547

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           + Q+    Y      I+ +  N    +S+S +R  L      +   +
Sbjct: 548 M-QELLPAYDIEVEIIERISTNGDV-ISASKVREFLASRDFSSIEAI 592


>gi|317472953|ref|ZP_07932257.1| glycerol-3-phosphate cytidylyltransferase [Anaerostipes sp.
           3_2_56FAA]
 gi|316899565|gb|EFV21575.1| glycerol-3-phosphate cytidylyltransferase [Anaerostipes sp.
           3_2_56FAA]
          Length = 137

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 32/155 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + V +          +            ++K
Sbjct: 4   VITYGTFDLLHAGHINLLRRAKELGDYLIVVVST-----DEFNWNEKRKKCYFSYEERKK 58

Query: 81  ILEKMGFSAL-IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E      + +             EQ +    V+   V T + G  +       G    
Sbjct: 59  LVEA--VRYVDLVIPENN------WEQKVSD--VQEYHVDTFVMGDDW------VGKFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L++         V++      +++ +S++ I+  L
Sbjct: 103 LKEYC-----DVVYLP-----RTEGISTTKIKQDL 127


>gi|284008849|emb|CBA75643.1| glycerol-3-phosphate cytidylyltransferase [Arsenophonus nasoniae]
          Length = 156

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 33/166 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++   + +   + + + +        S     +    + +++
Sbjct: 4   VITYGTFDLFHVGHIRLLKRLKSLGDYLIVAISTDD------FNSLKGKKSFFSFAERKE 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+E       +I            AE   ++   + L  +  I G     G D +G    
Sbjct: 58  IVESCKYVDLVI------------AENNWEQKRHDILNNQVNILG----MGNDWSGKFDS 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           L    E           +  ++++ +SS+ I+  L        A +
Sbjct: 102 LNDICEV----------IYLDRTESISSTQIKKELAIITPEKLAEI 137


>gi|227500448|ref|ZP_03930510.1| glycerol-3-phosphate cytidylyltransferase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217511|gb|EEI82830.1| glycerol-3-phosphate cytidylyltransferase [Anaerococcus tetradius
           ATCC 35098]
          Length = 133

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 58/158 (36%), Gaps = 29/158 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD IH GH  +LE+A  + +   + + +                T      +++
Sbjct: 4   IITYGTFDLIHYGHINLLERAKALGDYLIVAIST-----DEFNNYEKHKKTYFTYEQRKR 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++E +    L+  +   +          +K  V   ++ T + G  ++      G    L
Sbjct: 59  LVEALRCVDLVIPEKNWD---------QKKTDVHLYDIDTFVIGDDWK------GKFDFL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
               E  G   V++      ++  +S++ I+  L   +
Sbjct: 104 ----EDEGVEVVYLP-----RTPEISTTQIKRDLNNRN 132


>gi|194016759|ref|ZP_03055372.1| pantoate--beta-alanine ligase [Bacillus pumilus ATCC 7061]
 gi|194011365|gb|EDW20934.1| pantoate--beta-alanine ligase [Bacillus pumilus ATCC 7061]
          Length = 288

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 41/235 (17%)

Query: 1   MHVFHNIEINQSL------PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M+V  +I   + L        H  G V  +G    +H GH   L  A +  + + I V+S
Sbjct: 1   MNVVTHIHELKELIKLHQEKQHSIGFVPTMGF---LHEGH---LTLAKEARDQNDIVVMS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +             +++ E+ G   L    FT +       +    + V+
Sbjct: 55  IFVNPLQFGPNEDFESYPRDMERDQRLAEEAGVDIL----FTPDVKEMYPNEPSITMTVQ 110

Query: 115 W---------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF--HT 151
                                  ++  ++  T   FG   A    ++    + + F  H 
Sbjct: 111 KRTDVLCGKKRPGHFGGVVTVLTKLFHLVAPTNVYFGLKDAQQVAVIDAMIKDFFFDLHL 170

Query: 152 VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           V +  +R       SS N+   L+      A  L       +S V  GE+    +
Sbjct: 171 VSVPTVREEDGLAKSSRNV--YLSDKERQEAPALYRALKKGQSAVEKGERDVSRI 223


>gi|15645950|ref|NP_208129.1| hypothetical protein HP1337 [Helicobacter pylori 26695]
 gi|10720106|sp|O25895|NADD_HELPY RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|2314504|gb|AAD08379.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 174

 Score = 47.1 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++  ++ + VL                  L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIEQTLELLPSAKLIVL------PAYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 72  LK--GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 172


>gi|306831229|ref|ZP_07464390.1| glycerol-3-phosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304426795|gb|EFM29906.1| glycerol-3-phosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 486

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 31/155 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + V+S +        +            ++ 
Sbjct: 360 VITYGTFDLLHYGHINLLKRAKALGDYL-VVVISSD----EFNWNEKQKKCYFSYEQRKA 414

Query: 81  ILEKMGFSAL-IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E      + +    T      S EQ  +K  V    + T + G  ++      G    
Sbjct: 415 LVEA--VRYVDLVIPET------SWEQ--KKSDVHEYHIDTFVMGDDWK------GKFDF 458

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L    E+ G   V++      ++  +S++ I+  L
Sbjct: 459 L----EEEGVEVVYLP-----RTPEISTTQIKKDL 484


>gi|29831230|ref|NP_825864.1| pantoate--beta-alanine ligase [Streptomyces avermitilis MA-4680]
 gi|81718252|sp|Q82EC8|PANC_STRAW RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|29608345|dbj|BAC72399.1| putative pantoate--beta-alanine ligase [Streptomyces avermitilis
           MA-4680]
          Length = 333

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 23/195 (11%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E++  + +  +  V+ +G    +H GH  ++  A +IA      V++   +P    +   
Sbjct: 11  ELHARVRHGRRAVVMTMG---ALHEGHATLIRTAREIAGAEGEVVVTVFVNPLQFGRGED 67

Query: 68  PIFTLSPPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKVLVEWLEVKT- 120
                       KI E  G   +        Y         SA    +++   +      
Sbjct: 68  LDRYPRTLDADLKIAEAAGADVVFAPSADEVYPGGEPQVRISAGPMGERLEGAFRPGHFD 127

Query: 121 ---VITGTKFR--------FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
               + G            +G+  A    ++++      F      +  +R +    +SS
Sbjct: 128 GMLTVVGKLLHLTRPDVALYGQKDAQQLALIRRMARDLNFGVEIVGVPTVREDDGLALSS 187

Query: 168 SNIRTALTKGHVLNA 182
            N   A  +     A
Sbjct: 188 RNRYLAADERRTALA 202


>gi|154483839|ref|ZP_02026287.1| hypothetical protein EUBVEN_01543 [Eubacterium ventriosum ATCC
           27560]
 gi|149735330|gb|EDM51216.1| hypothetical protein EUBVEN_01543 [Eubacterium ventriosum ATCC
           27560]
          Length = 138

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 34/162 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + VLS +        +S           +++
Sbjct: 4   VITYGTFDMLHYGHINLLRRAKELGDYL-VVVLSTD----EFNWNSKQKKCYFTYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK+  V+  ++ T + G  +       G   
Sbjct: 59  VLEAIRYVDLVI-----------PEENWEQKISDVQDYKIDTFVMGNDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            L+          V++      +++ +S++ I+T L    + 
Sbjct: 102 FLKDYC-----EVVYLP-----RTEGISTTQIKTDLNHEDMA 133


>gi|325845933|ref|ZP_08169131.1| pantoate--beta-alanine ligase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481839|gb|EGC84871.1| pantoate--beta-alanine ligase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 279

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 72/246 (29%), Gaps = 34/246 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I+  + +    K      G V  +G    +H GH  ++++A+   +   I V+S
Sbjct: 1   MKVIKKIDELREILKDFKKEGKSIGLVPTMGF---LHKGHASLIKKAVSEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              K+ E +G   +   +      +  A   I+++   
Sbjct: 55  DFVNPIQFGPNEDLEAYPRDIDADSKLCEDLGADFIFNPEANEMYHDKKAFVDIEELSHN 114

Query: 115 WLEVKTV---------------ITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI--DE 156
               +                 I G     FG+  A    I++K           +    
Sbjct: 115 LCGARREGHFRGVCTVCTKLFNIVGPNRAYFGQKDAQQLAIIKKLVFDLNIPVEIVACPI 174

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS 216
           +R      +SS   R          AA L   +   E + +                 +S
Sbjct: 175 VREEDGLAMSS---RNTYLSTDERKAA-LCLSKAIFEGEKMANNGASVKEVLRKMEEIIS 230

Query: 217 PDILLK 222
            + L K
Sbjct: 231 SEKLAK 236


>gi|325142082|gb|EGC64508.1| pantoate--beta-alanine ligase [Neisseria meningitidis 961-5945]
          Length = 278

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 LE  G + +           +  ++ +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDEL 157
             +     +  V TV+             FGK       +++   E   F      +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RTEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|220910070|ref|YP_002485381.1| bifunctional protein RfaE [Cyanothece sp. PCC 7425]
 gi|219866681|gb|ACL47020.1| rfaE bifunctional protein [Cyanothece sp. PCC 7425]
          Length = 166

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 36/173 (20%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH-------PRTIIQSS 66
           P+  +  V+  G FD +H GH   L+ A  +       V+  N         P T     
Sbjct: 19  PDRWRPLVLTNGCFDLLHAGHVRYLQAARDLGR---SLVVGLNSDTSVQQIKPAT---PG 72

Query: 67  SPIFTLSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   + P   + ++L  +     ++        A  +A   I       L+    + G 
Sbjct: 73  VPPRPIVPEQQRAEVLAALRSVDGVVI------FAELTATALIA-----GLQPDIYVKGG 121

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +R   +   +   +Q  G +  F  + +           S++ I   +    
Sbjct: 122 DYRI--ETLPEAATVQAYGGQIQFIQIEVPS---------STTAIVQKILSAK 163


>gi|300173062|ref|YP_003772228.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887441|emb|CBL91409.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 143

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 36/164 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L++A ++ +   + + +  FN H       S    T      +
Sbjct: 4   VITYGTFDMLHYGHINLLKRAKEMGDYLIVALSTDEFNWH-------SKQKKTYFSYEKR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGD 136
           +++LE +     +I             E + QK   V+  +V T + G  +      AG 
Sbjct: 57  KQLLEAIRYVDLVI-----------PEEAWDQKTSDVKLYKVDTFVMGDDW------AGQ 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
              LQ   +    +     E        +S++ I+  L    + 
Sbjct: 100 FDFLQDETDAEVVYLARTPE--------ISTTQIKKDLNTKDLT 135


>gi|153812422|ref|ZP_01965090.1| hypothetical protein RUMOBE_02821 [Ruminococcus obeum ATCC 29174]
 gi|149831584|gb|EDM86671.1| hypothetical protein RUMOBE_02821 [Ruminococcus obeum ATCC 29174]
          Length = 136

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 33/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + + +          +            +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRARQLGDYLIVGLST-----DEFNWNEKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   V+   V T + G  ++      G   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWEQKRTDVKEYHVDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L    ++ G   V++      ++  +SSS I+  L    
Sbjct: 102 FL----KEEGCEVVYLP-----RTPEISSSQIKEDLHTKE 132


>gi|38637176|dbj|BAD03428.1| putative phosphoethanolamine cytidylyltransferase [Oryza sativa
           Japonica Group]
 gi|218200697|gb|EEC83124.1| hypothetical protein OsI_28285 [Oryza sativa Indica Group]
 gi|222640124|gb|EEE68256.1| hypothetical protein OsJ_26465 [Oryza sativa Japonica Group]
          Length = 428

 Score = 47.1 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 78/271 (28%), Gaps = 40/271 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 75  GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 128

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 129 LKWVDEVIPNAPYEITEEFMNT---------LFNKYNIDYIIHGDDPCLLPDGTDAYALA 179

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTAL-----TKGHVLNAAHLLGYRFTIE 193
           +K G                +++ VSS++I  R  L       G +              
Sbjct: 180 KKVGRYKQIK----------RTEGVSSTDIVGRILLTFKQKEAGSMEATTDANVAVNQNT 229

Query: 194 SDVIHGEKIGRTLGF-PTAN--MQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTM 250
               + +   +   F PT+   MQ S       G   +         ++G          
Sbjct: 230 GADTYDKVKSQLSNFLPTSRRIMQFSNGQAPLPGARVVYIDGAFDLFHAGHVEI-LRSAR 288

Query: 251 VPNGPLLLESFIFDFSQEIYGQRCTVSFFDY 281
                LL+        ++  G R  +   + 
Sbjct: 289 QLGDFLLVGVHDDQAIRDRRGYRPIMHLHER 319


>gi|224373618|ref|YP_002607990.1| glycerol-3-phosphate cytidylyltransferase [Nautilia profundicola
           AmH]
 gi|223589792|gb|ACM93528.1| glycerol-3-phosphate cytidylyltransferase [Nautilia profundicola
           AmH]
          Length = 128

 Score = 46.7 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++A  + +   I  +S +              T+ P + +++
Sbjct: 4   VLTYGTFDMFHIGHLNLLKRAKALGDYL-IVGISNDE-----FNEIKGKKTVIPFNERKE 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +     +I          YS EQ I+   ++   +   + G  ++      G    
Sbjct: 58  IVSAIRYVDMVIE--------EYSWEQKIKD--IKKYNIDVFVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L++         +++   ++     +S++ I+  L
Sbjct: 102 LKEYC-----EVIYLPRTKD-----ISTTLIKNCL 126


>gi|317404454|gb|EFV84867.1| cytidylyltransferase [Achromobacter xylosoxidans C54]
          Length = 162

 Score = 46.7 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 13/114 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L+QA ++     + V + +   R + + +     L+    
Sbjct: 27  RPLVFTNGVFDILHRGHATYLDQAAQLGATLVVAVNT-DESVRRLGKGAERP--LNRMED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +  +L  +GF  ++           + E  I       L+   ++ G  +   K
Sbjct: 84  RAALLAALGFVTVV-----TSFHEDTPEALI-----GQLKPDLIVKGGDYDMEK 127


>gi|312870799|ref|ZP_07730905.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           3008A-a]
 gi|311093675|gb|EFQ52013.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus iners LEAF
           3008A-a]
          Length = 129

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 57/158 (36%), Gaps = 34/158 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +  + ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVALST-----DEFNELKKHKEAYNSYNERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+   + T + G  ++      G   
Sbjct: 59  ILEAIKYVDEVI-----------PENDWNQKITDVQKYNIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L++              +   ++  +S++ I+  L  
Sbjct: 102 FLKEYCNV----------VYLTRTPGISTTKIKHDLHN 129


>gi|325206294|gb|ADZ01747.1| pantoate--beta-alanine ligase [Neisseria meningitidis M04-240196]
          Length = 278

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIQELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|325198072|gb|ADY93528.1| pantoate--beta-alanine ligase [Neisseria meningitidis G2136]
          Length = 278

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 LE  G + +           +  ++ +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDEL 157
             +     +  V TV+             FGK       +++   E   F      +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RTEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|331659232|ref|ZP_08360174.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA206]
 gi|315297675|gb|EFU56952.1| riboflavin kinase [Escherichia coli MS 16-3]
 gi|331053814|gb|EGI25843.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA206]
          Length = 131

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 28/131 (21%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSP 74
             V+  G FD +H+GH  ILE+A K  +   + V    LSF         S    + + P
Sbjct: 2   RTVITFGTFDVLHIGHIKILERAKKYGDRLIVGVSSDALSF---------SKKQRYPVYP 52

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            + + +I+  + +   +  + +LE              ++  +   +I G  +       
Sbjct: 53  ENERCEIIRSLQYVDDVFLEESLELKG---------EYIKKYKADILIMGNDW------E 97

Query: 135 GDRGILQKRGE 145
           G   + +K  E
Sbjct: 98  GKFDMFKKLCE 108


>gi|297192916|ref|ZP_06910314.1| pantothenate synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151554|gb|EFH31232.1| pantothenate synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 301

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 23/167 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A +        +++   +P                    +
Sbjct: 30  VMTMG---ALHRGHASLIRTARERVGPKGFVIVTVFVNPLQFGAGEDLDRYPRTLDADLR 86

Query: 81  ILEKMGFSALI------RYKFTLETANYSAEQFIQKVLVE-----WLEVKTVIT------ 123
             E+ G   +        Y         +A    +++        +  + TV+       
Sbjct: 87  TAEEAGADVVFAPSVDEVYPGGQPQVRITAGPMGERLEGRTRPGHFDGMLTVVAKLLHLT 146

Query: 124 GTKFR-FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
           G     FG+  A    ++++      F      +  +R +    +SS
Sbjct: 147 GPDVALFGQKDAQQLALIRRMVRDLNFPVEIVGVPTVREDDGLALSS 193


>gi|228936781|ref|ZP_04099570.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228822880|gb|EEM68723.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 133

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 33/157 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A +      I VLS +                   + ++ 
Sbjct: 5   VITYGTFDLLHYGHINLLRRAKQFGEYL-IVVLSTDE-----FNMLKDKKAYFSYNERKL 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           + EQ +  V+   ++V        F  G D  G+   
Sbjct: 59  LLEAIKYVDEVIP--------EMTWEQKVTDVISNNIDV--------FVMGNDWEGEFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++         V++      ++  +S++ I+T + +
Sbjct: 103 LKEYC-----EVVYLP-----RTDGISTTKIKTDMKE 129


>gi|126666757|ref|ZP_01737734.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Marinobacter sp. ELB17]
 gi|126628802|gb|EAZ99422.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Marinobacter sp. ELB17]
          Length = 481

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 63/176 (35%), Gaps = 36/176 (20%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           +++  + +    +  V   G FD +H GH   L QA  + +   +            + S
Sbjct: 331 SLQHIEYVRAQGERIVFTNGCFDILHAGHVRYLAQARALGDRLVVG-----------LNS 379

Query: 66  SSPIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
            + +  L       +P   + ++LE +     ++   F  +    SAE    + L+  ++
Sbjct: 380 DASVKRLKGEARPVNPLEDRIEVLEALACVDWVV--PFGDD----SAENDTPEQLIRKIQ 433

Query: 118 VKTVITGTKFRFGKDRAGDRGIL--QKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
            + ++ G  +            +   +  ++ G     +  L+   +  +  + +R
Sbjct: 434 PQVLVKGGDY--------SVETIVGAEFVQQNGGEVTVLPLLQGRSTSGI-ITKVR 480


>gi|225573364|ref|ZP_03782119.1| hypothetical protein RUMHYD_01556 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039277|gb|EEG49523.1| hypothetical protein RUMHYD_01556 [Blautia hydrogenotrophica DSM
           10507]
          Length = 129

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 32/157 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +          +            +++
Sbjct: 4   VITYGTFDLLHYGHVNLLQRAKALGDYLVVALST-----DEFNWNQKQKKCYFSYEERKR 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I  +        S EQ      V+   + T + G  +       G    
Sbjct: 59  LLEAIRYVDLVIPEE--------SWEQKASD--VQEYHIDTFVMGNDW------EGKFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++         V++      ++  +S++ I+  L K
Sbjct: 103 LKEYC-----DVVYLP-----RTPEISTTQIKKDLKK 129


>gi|41409350|ref|NP_962186.1| hypothetical protein MAP3252 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398170|gb|AAS05800.1| hypothetical protein MAP_3252 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 989

 Score = 46.7 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 29/170 (17%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           L    +  V   G FD +H GH  +L QA ++ +   I +++ +   R +  S  P+   
Sbjct: 847 LRRQGRTVVATGGCFDLLHTGHIRLLRQARELGDAL-IVLVNSDASVRALKGSGRPV--- 902

Query: 73  SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT-GTKFRFG 130
              + + ++L  +    A+  +         + E+ ++ +  +      +   G  +   
Sbjct: 903 MRDADRARVLAALACVDAVAVFD------GLTPERMLEDLRPD------IWVKGGDYVAA 950

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +    D         ++G   V +  +        SSS +  A   G   
Sbjct: 951 ELPEADVVY------RHGGEVVILPTVAG-----YSSSRLIAAAATGRPE 989


>gi|281179991|dbj|BAI56321.1| putative glycerol-3-phosphate cytidyltransferase [Escherichia coli
           SE15]
          Length = 131

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 28/131 (21%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSP 74
             V+  G FD +H+GH  ILE+A +  +   + V    LSF         S    + + P
Sbjct: 2   RTVITFGTFDVLHIGHIKILERAKEYGDRLIVGVSSDALSF---------SKKQRYPVYP 52

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            + + +I+  + +   +  + +LE              ++  +   +I G  +       
Sbjct: 53  ENERCEIIRSLQYVDDVFLEESLELKG---------EYIKKYKADILIMGNDW------E 97

Query: 135 GDRGILQKRGE 145
           G   + +K  E
Sbjct: 98  GKFDMFKKLCE 108


>gi|218283281|ref|ZP_03489336.1| hypothetical protein EUBIFOR_01925 [Eubacterium biforme DSM 3989]
 gi|218215971|gb|EEC89509.1| hypothetical protein EUBIFOR_01925 [Eubacterium biforme DSM 3989]
          Length = 157

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 33/159 (20%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           L   V+  G FD  H+GH  +L +A ++ +   + V S                     +
Sbjct: 29  LMKTVITYGTFDLFHVGHLNLLRRAKELGDYLIVAVSSDE------FNLGKNKVCKIKDT 82

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + KI+E +     +I           S EQ I+   V+   V   + G  ++      G
Sbjct: 83  DRMKIVEAIKYVDKVIP--------ETSWEQKIED--VKKYNVDVFVMGDDWK------G 126

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               L+          V++      +++ +S++ ++  L
Sbjct: 127 KFDFLKDYC-----EVVYLP-----RTEGISTTQLKEEL 155


>gi|170017489|ref|YP_001728408.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc citreum
           KM20]
 gi|169804346|gb|ACA82964.1| Glycerol-3-phosphate cytidylyltransferase [Leuconostoc citreum
           KM20]
          Length = 143

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 34/163 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L++A ++ +   + + +  FN H            T      +
Sbjct: 4   VITYGTFDMLHYGHINLLKRAKELGDYLIVALSTDEFNWH-------EKQKKTYFSYEKR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +++LE +     +I           S +Q I  V +   +V T + G  +       G  
Sbjct: 57  KQLLEAIRYVDLVIP--------ETSWDQKITDVSL--YQVDTFVMGDDW------QGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
             +Q++ +    + V++      ++  +S++ I+  L    + 
Sbjct: 101 DFIQEQTDA---NVVYLP-----RTPEISTTQIKQDLNTKDLA 135


>gi|255020099|ref|ZP_05292170.1| ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Acidithiobacillus caldus ATCC 51756]
 gi|254970461|gb|EET27952.1| ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Acidithiobacillus caldus ATCC 51756]
          Length = 356

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 13/124 (10%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           H +  V   G FD +H GH  +LE+A          V+  N           P   ++P 
Sbjct: 217 HRRPLVFTNGVFDILHRGHVQVLEEARA---QGGCLVVGVNDDASVRRLGKGPDRPINPL 273

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE-----VKTVITGTKFRFG 130
             +  +L  +         F    A  +    I+ +  + L       +  I G  F   
Sbjct: 274 EDRMAVLAGL-----AAVDFVTAFAQDTPAGLIETLEPDILVKGGDWPREAIVGADFVLR 328

Query: 131 KDRA 134
           +   
Sbjct: 329 RGGR 332


>gi|242399309|ref|YP_002994733.1| Glycerol-3-phosphate cytidyltransferase [Thermococcus sibiricus MM
           739]
 gi|327488427|sp|C6A439|RIBL_THESM RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|242265702|gb|ACS90384.1| Glycerol-3-phosphate cytidyltransferase [Thermococcus sibiricus MM
           739]
          Length = 148

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 22/161 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +H+GH   L+QA ++ +   + V     H +T+ +       ++    + +
Sbjct: 9   VVTGGVFDILHVGHIHFLKQAKELGDELVVIVA----HDKTVEERKGRRP-INSMYERAE 63

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L+ +     ++  +             I   +V+ L    +  G    F      D   
Sbjct: 64  VLKALKMVDEVVIGEPN----------CISFEIVKQLNPDIIALGPDQNF------DVSA 107

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           L++  +K   +   I      KS +  +S I   + +    
Sbjct: 108 LKEELKKKNINAEVIRIPYAYKSDVAKTSKIIQKIVETFCE 148


>gi|148996773|ref|ZP_01824491.1| EpsIIN, Glycerol-3-phosphate cytidylyltransferase [Streptococcus
           pneumoniae SP11-BS70]
 gi|168576759|ref|ZP_02722617.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus pneumoniae
           MLV-016]
 gi|307067017|ref|YP_003875983.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae AP200]
 gi|68642778|emb|CAI33132.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
 gi|68642856|emb|CAI33192.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
 gi|147757348|gb|EDK64387.1| EpsIIN, Glycerol-3-phosphate cytidylyltransferase [Streptococcus
           pneumoniae SP11-BS70]
 gi|183577539|gb|EDT98067.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus pneumoniae
           MLV-016]
 gi|306408554|gb|ADM83981.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae AP200]
 gi|307091296|gb|ADN28001.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091310|gb|ADN28014.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091316|gb|ADN28018.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091321|gb|ADN28022.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091326|gb|ADN28026.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091337|gb|ADN28034.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091341|gb|ADN28037.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
 gi|307091347|gb|ADN28042.1| CDP-glycerol biosynthetic protein Gct [Streptococcus pneumoniae]
          Length = 130

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 61/156 (39%), Gaps = 29/156 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   I V+S +                     ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNFEHRKN 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++E      +      L  +  S EQ  +K  ++   + T + G  ++      G    L
Sbjct: 59  LVEA--IRYV-----DLVISETSWEQ--KKTDIKEYHIDTFVMGDDWK------GKFDYL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
               ++ G   +++      +++ +S++ I+  L  
Sbjct: 104 ----KEEGVEVIYLP-----RTKEISTTKIKEDLAD 130


>gi|237843369|ref|XP_002370982.1| hypothetical protein TGME49_016740 [Toxoplasma gondii ME49]
 gi|211968646|gb|EEB03842.1| hypothetical protein TGME49_016740 [Toxoplasma gondii ME49]
          Length = 1114

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 27/107 (25%)

Query: 213  MQLSPDILLKEGVYAIRFRTQD-------------------------QTSYSGVANFGRN 247
            ++ S  + L  GVY                                    +    + G N
Sbjct: 997  IRTSHPVALFPGVYYGWATLHPLSLANAGGETEQHEIDRNNAKVERKVEVFKTAMSVGYN 1056

Query: 248  PTMVPNGPLLLESF-IFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEK 293
            P    N  + +E +   +F ++  G   TV    +LR E  F    +
Sbjct: 1057 PYF-GNTSVTIEPYIYHEFDEDFVGSPITVLVTGFLRSEAAFSSFGE 1102


>gi|241896373|ref|ZP_04783669.1| glycerol-3-phosphate cytidylyltransferase [Weissella
           paramesenteroides ATCC 33313]
 gi|241870353|gb|EER74104.1| glycerol-3-phosphate cytidylyltransferase [Weissella
           paramesenteroides ATCC 33313]
          Length = 162

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 65/160 (40%), Gaps = 30/160 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   I VLS +         S    T      +++
Sbjct: 18  VITYGTFDMLHYGHINLLRRAKQLGDYL-IVVLSSD----EFNWESKQKKTYFSYEKRKQ 72

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q I  +  +   V T++ G  +      +G    
Sbjct: 73  LLEAIRYVDLVIPEN--------SWDQKISDM--KEYHVDTLVMGDDW------SGKFDF 116

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           ++++ E      V++      ++  +S+S I+  L K  +
Sbjct: 117 IEEQTE---TEVVYLP-----RTPEISTSQIKNDLNKKKL 148


>gi|317010018|gb|ADU80598.1| hypothetical protein HPIN_07035 [Helicobacter pylori India7]
          Length = 171

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 19/162 (11%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I++Q +++   + + VL   P  +   +   P F  +    +E  L  
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFAKLVVL---PAYQNPFK--KPCFLDAKTRFKELELAL 69

Query: 85  MGFSALIRYKFTLETANYSA----EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            G   ++   F  E     A    E  +    +   +   ++ G           D   L
Sbjct: 70  KGMDRVLLSDF--EIKQKRAVPTIESTLHFQKLYCPKTLYLVIGADCLRHLSSWTDAKEL 127

Query: 141 QKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
            KR E   F  +  +E++              +SSS IR +L
Sbjct: 128 LKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|119387747|ref|YP_918781.1| glycerol-3-phosphate cytidylyltransferase [Paracoccus denitrificans
           PD1222]
 gi|119378322|gb|ABL73085.1| Glycerol-3-phosphate cytidylyltransferase [Paracoccus denitrificans
           PD1222]
          Length = 144

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 35/157 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +          S +     S    +  
Sbjct: 4   VLTYGTFDTLHYGHIRLLQRARALGDYLIVGLST-----DEFNASKNKQAFHSWEERKAH 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +        +I             E+  ++    V+   V        F  G D  G   
Sbjct: 59  LEALRYVDLVI------------PERTWEQKPHDVKLYHVDI------FTMGSDWQGKFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L    E           +   ++  +SS+ IR++L 
Sbjct: 101 DLSALCEV----------IYLERTNGISSTMIRSSLQ 127


>gi|190150910|ref|YP_001969435.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249876|ref|ZP_07336079.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303253476|ref|ZP_07339618.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248627|ref|ZP_07530641.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253242|ref|ZP_07535116.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307255488|ref|ZP_07537294.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259939|ref|ZP_07541652.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307264264|ref|ZP_07545854.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|34147956|gb|AAQ62554.1| Cps2B [Actinobacillus pleuropneumoniae]
 gi|46909850|gb|AAT06394.1| Cps6B [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|46909858|gb|AAT06400.1| Cps7B [Actinobacillus pleuropneumoniae]
 gi|189916041|gb|ACE62293.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647720|gb|EFL77934.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651267|gb|EFL81420.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306854838|gb|EFM87027.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306859229|gb|EFM91268.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861530|gb|EFM93518.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865967|gb|EFM97842.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306870435|gb|EFN02189.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 142

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 37/163 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +LE+A  + ++  + + +  FN      +              +
Sbjct: 4   VLTYGTFDLLHHGHIRLLERARSLGDHLTVAISTDQFN------LGKGKVCAY--TYEER 55

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             IL+ +     +I           + EQ ++   V+  E+   + G  +       G  
Sbjct: 56  AHILKAIRYVDEVIP--------ETNWEQKVED--VKNHEIDVFVMGDDW------EGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
             L           V++      ++  +S++ ++  L K  + 
Sbjct: 100 DFLADYC-----EVVYLP-----RTPDISTTQVKKMLAKKDLA 132


>gi|255011337|ref|ZP_05283463.1| cytidyltransferase-like protein [Bacteroides fragilis 3_1_12]
 gi|313149149|ref|ZP_07811342.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137916|gb|EFR55276.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 142

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 53/157 (33%), Gaps = 22/157 (14%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V  IG FD  H GH  +L++A  + +   I  ++ +     ++ +      ++      
Sbjct: 3   TVYVIGVFDLFHRGHVELLKKAKGLGDRL-IVAINSD----EMVANYKRKPVINENDRLA 57

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +                            K+ V    V  ++ G  +  G+       +
Sbjct: 58  VVKACSYVDEAFIIP-----------DLDNKLYVIKYNVDIIVHGDDWT-GEGYLNQICM 105

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +  +K+    V++       ++ +S+S I  ++ +
Sbjct: 106 TPEFLQKHQIELVYLP-----YTKGISTSKIIKSIQE 137


>gi|254673317|emb|CBA08473.1| pantoate--beta-alanine ligase [Neisseria meningitidis alpha275]
 gi|325202342|gb|ADY97796.1| pantoate--beta-alanine ligase [Neisseria meningitidis M01-240149]
 gi|325207905|gb|ADZ03357.1| pantoate--beta-alanine ligase [Neisseria meningitidis NZ-05/33]
          Length = 278

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 30/209 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
                 +SS N    L+      A  L  
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLYC 201


>gi|222034673|emb|CAP77415.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli LF82]
 gi|312947511|gb|ADR28338.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 131

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 28/131 (21%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSP 74
             V+  G FD +H+GH  ILE+A K  +   + V    LSF         S    + + P
Sbjct: 2   RTVITFGTFDVLHIGHIKILERAKKYGDRLIVGVSSDALSF---------SKKQRYPVYP 52

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            + + +I+  + +   +  + +LE              ++  +   +I G  +       
Sbjct: 53  ENERCEIIRSLQYVDDVFLEESLELKG---------EYIKKYKADILIMGNDW------E 97

Query: 135 GDRGILQKRGE 145
           G   + +K  E
Sbjct: 98  GKFDMFKKICE 108


>gi|311103722|ref|YP_003976575.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Achromobacter
           xylosoxidans A8]
 gi|310758411|gb|ADP13860.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Achromobacter
           xylosoxidans A8]
          Length = 162

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 13/114 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L+QA ++     + V + +   R + + +     L+    
Sbjct: 27  RPLVFTNGVFDILHRGHATYLDQAAQLGATLVVAVNT-DESVRRLGKGAERP--LNRMED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +  +L  +G   ++           + E  I       L+   ++ G  +   K
Sbjct: 84  RAALLAALGCVTVV-----TSFHEDTPEALI-----GQLKPDLIVKGGDYDMEK 127


>gi|238855379|ref|ZP_04645690.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           269-3]
 gi|256852274|ref|ZP_05557660.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           27-2-CHN]
 gi|260661693|ref|ZP_05862604.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           115-3-CHN]
 gi|260665380|ref|ZP_05866228.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932110|ref|ZP_06337567.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           208-1]
 gi|282932296|ref|ZP_06337733.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           208-1]
 gi|297205558|ref|ZP_06922954.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           JV-V16]
 gi|313473060|ref|ZP_07813544.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           1153]
 gi|238831977|gb|EEQ24303.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           269-3]
 gi|239528719|gb|EEQ67720.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           1153]
 gi|256615320|gb|EEU20511.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           27-2-CHN]
 gi|260547440|gb|EEX23419.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           115-3-CHN]
 gi|260560884|gb|EEX26860.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281303579|gb|EFA95744.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           208-1]
 gi|281303789|gb|EFA95934.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           208-1]
 gi|297150136|gb|EFH30433.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus jensenii
           JV-V16]
          Length = 128

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 60/156 (38%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +  + ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNSYAERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             E + QK+  V+  ++ T + G  ++      G   
Sbjct: 59  ILEAIKYVDEVI-----------PEEDWDQKIKDVQKYDINTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S++ I+  L
Sbjct: 102 FLKPYC-----DVVYLP-----RTPGISTTKIKEDL 127


>gi|58336845|ref|YP_193430.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus acidophilus
           NCFM]
 gi|58254162|gb|AAV42399.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus acidophilus
           NCFM]
          Length = 128

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I    +  + A            V+  +V T + G  +R      G   
Sbjct: 59  ILEAIRYVDQVIPEKDWDQKIA-----------DVKKYDVDTFVMGDDWR------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S++ I+  L
Sbjct: 102 FLKPYC-----DVVYLP-----RTPGISTTKIKEDL 127


>gi|319957315|ref|YP_004168578.1| pantothenate synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419719|gb|ADV46829.1| pantothenate synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 275

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 42/219 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V  + E   ++ + L G    V  +G    +H GH  ++ +A +  ++    ++S   
Sbjct: 1   MKVERSYEEFVTVRDALTGSIGFVPTMG---ALHEGHLSLIRRAKEENDH---VIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL-------------------E 98
           +P   ++               +I E  G   L                          E
Sbjct: 55  NPTQFLEGEDLDKYPRREEADRRICELAGVDLLYMPTTDQIYEEDELSIGAPKIRGYILE 114

Query: 99  TANYSAE-QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
            A        + +V+++ L +       +  FGK  A    ++++    Y   T  +   
Sbjct: 115 GAKRPGHFDGMLQVVMKLLNLSR---ADRAYFGKKDAQQLVLIRQMVRTYFMRTQIVPCE 171

Query: 157 -LRNNKSQIVSSS--------NIRTALTKGHVLNAAHLL 186
            +R+     +SS           R       +  AA ++
Sbjct: 172 IVRDPDGLALSSRNLYLSDEERRRALSLSRSLKRAAEMI 210


>gi|284165742|ref|YP_003404021.1| cytidyltransferase-related domain protein [Haloterrigena turkmenica
           DSM 5511]
 gi|284015397|gb|ADB61348.1| cytidyltransferase-related domain protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 162

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 30/155 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPI--FTLSPPSIQEKI 81
           G FD +H GH  + E+A ++ +   +TV L+ +      +   +      +     +++ 
Sbjct: 7   GTFDPVHDGHRRLFERAFELGD---VTVGLTSDE-----LAPKTRHVERRVRSFDERKEA 58

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK------TVITGTKFRFGKDRAG 135
           LE                A      F  + L E   +        ++   + R G +R  
Sbjct: 59  LEAE----------LESFAADHDRAFEVRCLEEPTGIATEPQFDYLVVSPETRDGGER-- 106

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
               +++         V +  +R     I+SS+ I
Sbjct: 107 -INEIRRERGHDPLEVVVVPHVRAEDGDIISSTRI 140


>gi|302866708|ref|YP_003835345.1| cytidyltransferase-related domain-containing protein
           [Micromonospora aurantiaca ATCC 27029]
 gi|315503122|ref|YP_004082009.1| cytidyltransferase-related domain protein [Micromonospora sp. L5]
 gi|302569567|gb|ADL45769.1| cytidyltransferase-related domain protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315409741|gb|ADU07858.1| cytidyltransferase-related domain protein [Micromonospora sp. L5]
          Length = 496

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 27/144 (18%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT--IIQSSSPIFTLSP 74
            G VVA G  FD +H GH   L+ A ++ +     V+  N       +     P+    P
Sbjct: 329 GGTVVATGGCFDLLHAGHVATLQAARQLGD---CLVVCLNSDASVAGLKGPERPVV---P 382

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              + ++L  +G   A++ +      A  S            L     + G  +  G   
Sbjct: 383 QGDRGRLLAALGCVDAVLIFDEPTPEAALSW-----------LRPDIWVKGGDYASG--- 428

Query: 134 AGDRGILQ--KRGEKYGFHTVFID 155
            G    L   +   ++G HTV + 
Sbjct: 429 -GGPETLPETEILARWGGHTVVVP 451


>gi|315231050|ref|YP_004071486.1| glycerol-3-phosphate cytidyltransferase [Thermococcus barophilus
           MP]
 gi|315184078|gb|ADT84263.1| glycerol-3-phosphate cytidyltransferase [Thermococcus barophilus
           MP]
          Length = 150

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH   L QA ++ +   + V     H  T+++       ++    + +
Sbjct: 11  VLVGGVFDILHVGHIHFLSQAKQLGDELVVIVA----HDETVVRRKGRPP-INSMHERAE 65

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L+ +     +                 I   LV+ +    V  G    F          
Sbjct: 66  VLKALKMVDEVYI----------GEPDGISFELVKRINPDVVALGPDQDF------KCEE 109

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           L+++  ++G +   I      KS +  +S I   + +    
Sbjct: 110 LKRQLRQHGINAEVIRIPYLYKSDVAKTSRIIKRIVEIFCE 150


>gi|254670438|emb|CBA06053.1| pantoate--beta-alanine ligase [Neisseria meningitidis alpha153]
          Length = 278

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|81429187|ref|YP_396188.1| glycerol-3-phosphate cytidyltransferase (CDP-glycerol
           pyrophosphorylase) (teichoic acid biosynthesis protein
           D) [Lactobacillus sakei subsp. sakei 23K]
 gi|78610830|emb|CAI55881.1| Glycerol-3-phosphate cytidyltransferase (CDP-glycerol
           pyrophosphorylase) (Teichoic acid biosynthesis protein
           D) [Lactobacillus sakei subsp. sakei 23K]
          Length = 128

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 57/158 (36%), Gaps = 35/158 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +          +            ++ 
Sbjct: 4   VLTYGTFDLLHWGHVHLLERASQLGDELIVGLSTDE------FNAEKHKEAYHSYEHRKY 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  V+  ++   + G  ++      G   
Sbjct: 58  ILEAIRYVDKVI-----------PEKDWEQKIKDVQKYDIDVFVMGDDWK------GKFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L+          +++      ++  +S++ I+  L  
Sbjct: 101 FLKDYC-----EVIYLP-----RTTGISTTQIKQDLEN 128


>gi|268611408|ref|ZP_06145135.1| EpsIIN, glycerol-3-phosphate cytidylyltransferase [Ruminococcus
           flavefaciens FD-1]
          Length = 150

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 35/161 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I V+S +        +            ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKALGDYL-IVVISSD----KFNWNEKHKKCYFTYEQRKA 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE--WLEVKTVITGTKFRFGKDRAGDR 137
           ++E +     +I             E+   +   +     + T + G  ++      G  
Sbjct: 59  LVEAIRYVDLVI------------PEESWNQKRSDMHEYHIDTFVMGDDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L    ++ G   V++      ++  +SSS I+  L   +
Sbjct: 101 DFL----KEEGVEVVYLP-----RTPEISSSQIKKDLYDAN 132


>gi|157692741|ref|YP_001487203.1| pantoate--beta-alanine ligase [Bacillus pumilus SAFR-032]
 gi|189036406|sp|A8FEH6|PANC_BACP2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|157681499|gb|ABV62643.1| pantoate--beta-alanine ligase [Bacillus pumilus SAFR-032]
          Length = 288

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 40/212 (18%)

Query: 3   VFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           V H  E+ + +  H +     G V  +G    +H GH   L  A +  + + + V+S   
Sbjct: 4   VTHIHELKELIKQHQEKQHSIGFVPTMGF---LHEGH---LTLAKEARDQNDLVVMSIFV 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-- 115
           +P     +             +++ ++ G   L    FT +     A +    + V    
Sbjct: 58  NPLQFGPNEDFESYPRDMERDQRLAKEAGVDIL----FTPDVKEMYANEPSITMTVRKRT 113

Query: 116 -------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF--HTVFI 154
                               ++  ++  T   FG   A    ++    + + F  H V +
Sbjct: 114 DVLCGKKRPGHFDGVVTVLTKLFHLVAPTNAYFGLKDAQQVAVIDAMIKDFFFDLHLVSV 173

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             +R       SS N+   L+      A  L 
Sbjct: 174 PTVREEDGLAKSSRNV--YLSDKERQEAPALY 203


>gi|291004947|ref|ZP_06562920.1| putative phosphoheptose isomerase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 470

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 27/164 (16%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +++   +       V   G FD +H GH  +L++A ++ +   +  ++ +   R +    
Sbjct: 324 LDVAADVRRGGGRLVATGGCFDLLHPGHVRLLQRARELGDAL-VVCMNSDDSVRRLKGPG 382

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+      + +  +LE +    A+    F       S    +     + L     + G 
Sbjct: 383 RPVV---GEADRRHLLEALEPVDAVAV--FDES----SPSALL-----DELRPDVWVKGG 428

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +        D         ++G  TVF+  +     +  S++ 
Sbjct: 429 DYDLASLPEADV------VHRHGGRTVFVPLV-----EGYSTTR 461


>gi|134102019|ref|YP_001107680.1| putative phosphoheptose isomerase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914642|emb|CAM04755.1| putative phosphoheptose isomerase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 471

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 27/164 (16%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +++   +       V   G FD +H GH  +L++A ++ +   +  ++ +   R +    
Sbjct: 325 LDVAADVRRGGGRLVATGGCFDLLHPGHVRLLQRARELGDAL-VVCMNSDDSVRRLKGPG 383

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+      + +  +LE +    A+    F       S    +     + L     + G 
Sbjct: 384 RPVV---GEADRRHLLEALEPVDAVAV--FDES----SPSALL-----DELRPDVWVKGG 429

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            +        D         ++G  TVF+  +     +  S++ 
Sbjct: 430 DYDLASLPEADV------VHRHGGRTVFVPLV-----EGYSTTR 462


>gi|158312065|ref|YP_001504573.1| pantoate--beta-alanine ligase [Frankia sp. EAN1pec]
 gi|158107470|gb|ABW09667.1| pantoate--beta-alanine ligase [Frankia sp. EAN1pec]
          Length = 360

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 49/171 (28%), Gaps = 29/171 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           ++  V+ +G    +H GH  ++  A + A+     V++   +P                 
Sbjct: 79  VRAVVMTMG---ALHRGHAELIRAARRRADQ---VVVTIFVNPLQFGPGEDLDRYPRTFE 132

Query: 77  IQEKILEKMGFSALI---RYKFTLETANYSA---------------EQFIQKVLVEWLEV 118
               +  + G  A+    +          SA                  +  ++   L +
Sbjct: 133 ADLDLCAREGVDAVYAPTQVHDPAPLVTLSAGRLGDVLEGASRPGHFDGMLTLVGTMLHL 192

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
                     FG+  A     +++      F      +  +R+     +SS
Sbjct: 193 VRPDVAF---FGRKDAQQLVCIRRMVADLAFQVEIVGVPTVRDTDGLALSS 240


>gi|221633815|ref|YP_002523041.1| aut protein [Thermomicrobium roseum DSM 5159]
 gi|221156845|gb|ACM05972.1| aut protein [Thermomicrobium roseum DSM 5159]
          Length = 181

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 23/177 (12%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++++ L    K  V+  G+FD +H+GH   L+ A  + +   I  ++ +   R     + 
Sbjct: 12  KLSEDLHRAGKRIVLTNGHFDLLHIGHVRYLQAARSLGD-VLIVAVNDDVSTRRRKGRAR 70

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   L P + + ++L  +     +  +         +AE+ ++ V          + G  
Sbjct: 71  P---LVPEAERAELLAALACVDYVTIFP------GETAEEVVRLV-----RPHVYVKGGD 116

Query: 127 F-RFGKDRAGDRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           +    +D A  +  L +       G   V I  +     +  +S+ +R  L      
Sbjct: 117 YGTTEEDAAAGKQPLPEAPVVRALGGEVVLIPLV----PERSTSALVRRILAAYGCE 169


>gi|13129435|gb|AAK13093.1|AC078839_9 Putative phospholipid cytidylyltransferase [Oryza sativa Japonica
           Group]
          Length = 742

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 29/150 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 419 GCFDLMHYGHANALRQAKLLGDQLVVGVVSDE----EIVANKGPPVL--SMEERLTLVSG 472

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y+ T E  N          L     +  +I G       D      + 
Sbjct: 473 LKWVDEVIPNAPYEITEEFMNT---------LFNKYNIDYIIHGDDPCLLPDGTDAYALA 523

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           +K G                +++ VSS++I
Sbjct: 524 KKVGRYKQIK----------RTEGVSSTDI 543


>gi|325132284|gb|EGC54977.1| pantoate--beta-alanine ligase [Neisseria meningitidis M6190]
 gi|325137745|gb|EGC60320.1| pantoate--beta-alanine ligase [Neisseria meningitidis ES14902]
          Length = 278

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 64/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLS 200


>gi|227903403|ref|ZP_04021208.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus acidophilus
           ATCC 4796]
 gi|227868879|gb|EEJ76300.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus acidophilus
           ATCC 4796]
          Length = 139

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 15  VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 69

Query: 81  ILEKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I    +  + A            V+  +V T + G  +R      G   
Sbjct: 70  ILEAIRYVDQVIPEKDWDQKIA-----------DVKKYDVDTFVMGDDWR------GKFD 112

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+             D +   ++  +S++ I+  L
Sbjct: 113 FLKPYC----------DVVYLPRTPGISTTKIKEDL 138


>gi|169350318|ref|ZP_02867256.1| hypothetical protein CLOSPI_01079 [Clostridium spiroforme DSM 1552]
 gi|169293101|gb|EDS75234.1| hypothetical protein CLOSPI_01079 [Clostridium spiroforme DSM 1552]
          Length = 128

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 31/156 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  I+++A  + +   + V S          +            ++ 
Sbjct: 4   VITYGTFDLFHVGHLNIIKRAKALGDYLVVAVSSDE------FNAKKGKKAYHCDQDRKT 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ILE      +    F       S EQ I  +    ++V   + G  +       G    L
Sbjct: 58  ILEA--IRYVDEVIFEE-----SWEQKIDDIKKHDIDV--FVMGDDW------EGKFDYL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           ++         V++      +++ +S++ I+  L K
Sbjct: 103 KEYC-----EVVYLP-----RTKGISTTKIKDDLHK 128


>gi|165977016|ref|YP_001652609.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|37588878|gb|AAQ94101.1| CpsB [Actinobacillus pleuropneumoniae serovar 8 str. 405]
 gi|165877117|gb|ABY70165.1| Glycerol-3-phosphate cytidylyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 142

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 37/163 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +LE+A  + ++  + + +  FN      +              +
Sbjct: 4   VLTYGTFDLLHHGHIRLLERARSLGDHLTVAISTDQFN------LGKGKVCAY--TYEER 55

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             IL+ +     +I             EQ I    V+  E+   + G  +       G  
Sbjct: 56  AHILKAIRYVDEVIP--------ETKWEQKIDD--VKNHEIDVFVMGDDW------EGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
             L           V++      ++  +S++ ++  L K  + 
Sbjct: 100 DFLADYC-----EVVYLP-----RTPDISTTQVKKMLAKKDLA 132


>gi|186686502|ref|YP_001869698.1| bifunctional pantoate ligase/cytidylate kinase [Nostoc punctiforme
           PCC 73102]
 gi|186468954|gb|ACC84755.1| pantoate--beta-alanine ligase [Nostoc punctiforme PCC 73102]
          Length = 577

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 50/222 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +GN   +H GH  ++++A +  +     ++S   +P     +             
Sbjct: 86  GLVPTMGN---LHQGHLSLIQRARQENS---TVIVSIFVNPLQFAPNEDYQRYPRTLEQD 139

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI---------TG----- 124
           +K+ E+ G  A+         A    E  + +  ++  +V  VI          G     
Sbjct: 140 QKLCEQAGVDAI--------FAPTPEEMAVPQKSIQESKVTQVIPPSAMMTGLCGRSRLG 191

Query: 125 ------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQI 164
                                 FG+       I+++           +    +R      
Sbjct: 192 HFQGVATIVTKLFNLVQPDHAYFGQKDCQQLAIIKRLVADLNLPVEIVACPTVREASGLA 251

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            SS N    LT      AA L       E+  I G++    L
Sbjct: 252 FSSRN--QYLTATAKEQAAALYRGLQRAEAAFIAGDRNSNQL 291


>gi|297380518|gb|ADI35405.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Helicobacter pylori v225d]
          Length = 174

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++  ++ + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPSAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GMDRVLLSDFEIKQERAVPTIESVIHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDVPISSSAIRASL 172


>gi|293381883|ref|ZP_06627851.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           214-1]
 gi|290921530|gb|EFD98564.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           214-1]
          Length = 128

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I    +  + A            V+   + T + G  ++      G   
Sbjct: 59  ILEAIRYVDQVIPEKDWDQKIA-----------DVQKYHIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+             D +   ++  +S++ I+  L
Sbjct: 102 FLKPYC----------DVVYLPRTPGISTTKIKEDL 127


>gi|227876999|ref|ZP_03995092.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|256844689|ref|ZP_05550174.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|256850573|ref|ZP_05555999.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|262047027|ref|ZP_06019986.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           MV-3A-US]
 gi|295692378|ref|YP_003600988.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           ST1]
 gi|312984233|ref|ZP_07791578.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           CTV-05]
 gi|227863425|gb|EEJ70851.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|256613230|gb|EEU18434.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|256712596|gb|EEU27591.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572604|gb|EEX29165.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           MV-3A-US]
 gi|295030484|emb|CBL49963.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           ST1]
 gi|310894328|gb|EFQ43405.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus crispatus
           CTV-05]
          Length = 128

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 57/156 (36%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  V+   + T + G  ++      G   
Sbjct: 59  ILEAIRYVDQVI-----------PEKDWDQKITDVQKYHIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+             D +   ++  +S++ I+  L
Sbjct: 102 FLKPYC----------DVVYLPRTPGISTTKIKEDL 127


>gi|217031586|ref|ZP_03437091.1| hypothetical protein HPB128_21g144 [Helicobacter pylori B128]
 gi|216946786|gb|EEC25382.1| hypothetical protein HPB128_21g144 [Helicobacter pylori B128]
          Length = 56

 Score = 45.5 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 12 SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIK 43
          S+ +  +   +AIG FDG+HLGH  + ++   
Sbjct: 6  SISSEHEVKSLAIGKFDGLHLGHQALFKELKD 37


>gi|323144103|ref|ZP_08078743.1| bifunctional protein RfaE, domain I [Succinatimonas hippei YIT
           12066]
 gi|322416118|gb|EFY06812.1| bifunctional protein RfaE, domain I [Succinatimonas hippei YIT
           12066]
          Length = 474

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 14/122 (11%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           + +  +L +  K  V+  G FD IH GH   L++A  + +   I  ++ +   + +   +
Sbjct: 328 LTVVNTLKSQQKRIVMTNGCFDIIHKGHVDYLKRARALGD-VLIVAVNSDESVQKLKGPT 386

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            PI TL+    + ++LE +G        F +  +  + ++ I K+L + L     + G  
Sbjct: 387 RPIVTLN---DRMEVLEALG-----CVDFVVPFSEETPQRLIAKILPDIL-----VKGGD 433

Query: 127 FR 128
           + 
Sbjct: 434 YT 435


>gi|149194097|ref|ZP_01871195.1| pantoate--beta-alanine ligase [Caminibacter mediatlanticus TB-2]
 gi|149136050|gb|EDM24528.1| pantoate--beta-alanine ligase [Caminibacter mediatlanticus TB-2]
          Length = 271

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 49/224 (21%)

Query: 1   MHVFHNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M +  + +  Q    + K  G V  +G    +H GH  ++++A +      I V+S   +
Sbjct: 1   MKIITSPKEVQEFLKYKKNIGFVPTMG---ALHEGHLSLIKKAREENE---IVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P   +                +I ++ G   +    FT  + N  +E    ++L++  ++
Sbjct: 55  PTQFLPGEDLDKYPRRLQADFEICKRAGVDLV----FTPNSENMYSED---EILIKAPKI 107

Query: 119 K-TVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           K  ++ G                        +  FGK  A    ++++  + + F    +
Sbjct: 108 KGYILEGFFRPGHFDGVLQVVNKLFNIVRPNRAYFGKKDAQQLYLIKQMVKNFFFDIEIV 167

Query: 155 D--ELRNNKSQIVSSSNI--------RTALTKGHVLNAAHLLGY 188
           +   +R      +SS NI        R       +  AA L   
Sbjct: 168 ECKTVREKDGLALSSRNIYLSEEERKRALTISKALKRAAKLSTN 211


>gi|262089318|gb|ACY24538.1| predicted nucleotidyltransferase [uncultured crenarchaeote 76h13]
          Length = 155

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 14/152 (9%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH+++L +A ++     I V S +        +      ++   I+E+
Sbjct: 5   VATGGTFDILHKGHYMLLLKAFEVGQRVIIGVSSDS------FATRKQKKIINNYRIREE 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            L+K      I   F     +           V   +V+ +IT        +       L
Sbjct: 59  NLKKF-----IDKNFKKSNYSLYQLDDFYGPTVLTRDVRAIITTES---SLENCVKINKL 110

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           ++         + +  + + + +++SS+ IR 
Sbjct: 111 RESKGMPQLEIILVPLVGDKEGKVISSTRIRK 142


>gi|300812892|ref|ZP_07093286.1| putative glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300496118|gb|EFK31246.1| putative glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
          Length = 157

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 38/175 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L ++  + +   + + +           S    T      +++
Sbjct: 10  VITYGTFDLLHYGHINLLRRSKALGDYLIVALST-----DEFNWKSKHKKTYFSYEERKQ 64

Query: 81  ILEKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I    +  + ++                + T + G  ++      G   
Sbjct: 65  LLEAIRYVDLVIPEKDWDQKRSDM-----------HEYHIDTFVMGDDWK------GKFD 107

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            L    ++ G   V++      ++  +SSS I+       + +A  + G      
Sbjct: 108 FL----KEEGVDVVYLP-----RTPEISSSKIKQ-----DLYDANTVTGESCLFH 148


>gi|288920471|ref|ZP_06414779.1| pantoate/beta-alanine ligase [Frankia sp. EUN1f]
 gi|288348123|gb|EFC82392.1| pantoate/beta-alanine ligase [Frankia sp. EUN1f]
          Length = 381

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 27/189 (14%)

Query: 8   EINQSLPNH-LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           E  ++ P   ++G V+ +G    +H GH  ++ +A +  +     V++   +P       
Sbjct: 90  EAREAAPARGVRGVVMTMG---ALHRGHAALIREARRRTDQ---VVVTIFVNPLQFGPGE 143

Query: 67  SPIFTLSPPSIQEKILEKMGFSALI---RYKFTLETANYSAEQFIQKVLV----EWLEVK 119
                    +    +    G   +               SA      +         +  
Sbjct: 144 DLDRYPRTFAADLDVCASEGADIVYAPSVVHDPAPLVTLSAGPLGDVLEGASRPGHFDGM 203

Query: 120 TVITGTKFR--------FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSN 169
             + GT F         FG+  A     +++  +   F    V +  +R+     +SS  
Sbjct: 204 LTLVGTMFHLVRPDVAFFGRKDAQQLVCIRRMVDDLAFPLEIVGVPTVRDTDGLALSS-- 261

Query: 170 IRTALTKGH 178
            R A     
Sbjct: 262 -RNAYLDAD 269


>gi|255570558|ref|XP_002526236.1| conserved hypothetical protein [Ricinus communis]
 gi|223534430|gb|EEF36133.1| conserved hypothetical protein [Ricinus communis]
          Length = 377

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 23/178 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P     P   +  ++  
Sbjct: 26  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIIANKGPPVL--PMEERLALVSG 79

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I        A    EQF+ ++  E  ++  +I G       D      + ++ 
Sbjct: 80  LKWVDEVIA---NAPYAIT--EQFMNRLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKRA 133

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
           G                +++ VSS++I   +   +    +     + ++  D   G +
Sbjct: 134 GRYKQIK----------RTEGVSSTDIVGRILFANDAKVSECHDDKLSLPGDACKGNQ 181


>gi|210612567|ref|ZP_03289358.1| hypothetical protein CLONEX_01560 [Clostridium nexile DSM 1787]
 gi|210151492|gb|EEA82499.1| hypothetical protein CLONEX_01560 [Clostridium nexile DSM 1787]
          Length = 408

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 12/121 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH   +E+A K+     + V+         +Q  +P   L P  ++ K+  K G   
Sbjct: 13  FHNGHQYHIEKAKKLTKADKVVVV----MSGNFVQRGAPA--LLPKHLRAKMALKSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGF 149
           +I           ++ ++     V  L     +      FG +  GD  +LQK  +    
Sbjct: 67  VIELP---VFYACASAEYFAYGAVSLLHALRCV--DSICFGSE-CGDLTLLQKAADIMAE 120

Query: 150 H 150
            
Sbjct: 121 E 121


>gi|182626357|ref|ZP_02954112.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens D str.
           JGS1721]
 gi|177908376|gb|EDT70921.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens D str.
           JGS1721]
          Length = 345

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 15/165 (9%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSIQEKILEKMGFSAL 90
            GH  ++E+A K  +   + +L+               +  L    ++  ++ + G   +
Sbjct: 170 KGHKYLIEKASKENDVVHLFILT--EDKSEFSTKDRINMVKLGTKYLKNVLIHEAGKYII 227

Query: 91  IRYKFTLETAN-----YSAEQFI-----QKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
               F             A  ++      + + + L +K    G +  F          +
Sbjct: 228 SSATFPSYFIKEQKNITKAHAYLDLTLFCEYISKALNIKYRYVGEE-PFSNLTNEYNQYM 286

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           ++   KY    + +  L+ N  Q +S+SN+R  L +G++     L
Sbjct: 287 KEILPKYNIQVIEVKRLKEN-GQAISASNVRHFLKEGNLEKVESL 330


>gi|257467761|ref|ZP_05631857.1| cytidyltransferase-related domain protein [Fusobacterium ulcerans
           ATCC 49185]
 gi|317062052|ref|ZP_07926537.1| glycerol-3-phosphate cytidyltransferase [Fusobacterium ulcerans
           ATCC 49185]
 gi|313687728|gb|EFS24563.1| glycerol-3-phosphate cytidyltransferase [Fusobacterium ulcerans
           ATCC 49185]
          Length = 449

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 32/153 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A +  +   + V +      +  ++   +        + +
Sbjct: 4   VITYGTFDLLHQGHINLLKRAKEYGDYLIVGVTT-----DSYDKTRGKLNVNDSIINRIE 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ++K G    +I      E      E       ++   + T I G+ ++      G    
Sbjct: 59  NIKKTGYVDEIII----EEYEGQKVED------IQKYNIDTFIIGSDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           L++  E           +   +++ +SS+ IR 
Sbjct: 103 LKEFCEV----------VYLERTKGISSTQIRE 125


>gi|315037766|ref|YP_004031334.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus amylovorus
           GRL 1112]
 gi|325956241|ref|YP_004286851.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           acidophilus 30SC]
 gi|312275899|gb|ADQ58539.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus amylovorus
           GRL 1112]
 gi|325332806|gb|ADZ06714.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           acidophilus 30SC]
 gi|327183057|gb|AEA31504.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus amylovorus
           GRL 1118]
          Length = 128

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 58/156 (37%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  V+   + T + G  ++      G   
Sbjct: 59  ILEAIRYVDKVI-----------PEKDWDQKIDDVKKYNIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S++ I+  L
Sbjct: 102 FLKPYC-----DVVYLP-----RTPGISTTKIKEDL 127


>gi|325127987|gb|EGC50886.1| pantoate--beta-alanine ligase [Neisseria meningitidis N1568]
          Length = 278

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 64/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIQELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLS 200


>gi|269925267|ref|YP_003321890.1| cytidyltransferase-related domain protein [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269788927|gb|ACZ41068.1| cytidyltransferase-related domain protein [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 495

 Score = 45.2 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 47/113 (41%), Gaps = 18/113 (15%)

Query: 18  KGGVVAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           +G V+ +  G FD +H GH  +L +A ++ +   +  ++ +   R +   + P   ++  
Sbjct: 348 EGKVIVMVNGVFDLLHAGHVNLLRKAKELGD-LLVVAINSDKSARRLKGPNRP---INDE 403

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             + +++  +     ++   F  +    +  Q I     + +    ++ G  +
Sbjct: 404 RHRLELVASLEPVDHVVL--FDED----TPIQLI-----KTIRPHVLVKGADY 445


>gi|315635638|ref|ZP_07890901.1| pantoate-beta-alanine ligase [Arcobacter butzleri JV22]
 gi|315479935|gb|EFU70605.1| pantoate-beta-alanine ligase [Arcobacter butzleri JV22]
          Length = 272

 Score = 45.2 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 41/198 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   IE  Q++  +  G V     +G    +H GH  +++QA    +   I ++S   
Sbjct: 1   MQVLKTIEELQNIRKNSLGKVGLVPTMG---ALHNGHISLIKQARNEND---IVIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P   +               +KI +      +    F  E +        ++VLV+   
Sbjct: 55  NPTQFLPGEDLDAYPRKDEADKKICQMCKVDYV----FMPEISTM---YTKEEVLVKAPN 107

Query: 118 VKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYG--FHTV 152
              ++ G                           FGK  A    ++Q+  + +    + V
Sbjct: 108 KSYILEGKTRPGHFDGVLQVVLKLFNLTQPTNAYFGKKDAQQLTLIQQMVKNFFLPINIV 167

Query: 153 FIDELRNNKSQIVSSSNI 170
             D +R      +SS NI
Sbjct: 168 PCDIVREEDGLALSSRNI 185


>gi|149195101|ref|ZP_01872193.1| probable nicotinate-nucleotide adenylyltransferase [Caminibacter
           mediatlanticus TB-2]
 gi|149134814|gb|EDM23298.1| probable nicotinate-nucleotide adenylyltransferase [Caminibacter
           mediatlanticus TB-2]
          Length = 179

 Score = 45.2 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD IHLGH  ++++A+K  +   + ++     P   +      F+ +PP I+ K L+K
Sbjct: 8   GSFDPIHLGHIEVVKKALKNLDIDKLIIM-----P-NYLNPLKHNFS-APPEIRLKWLKK 60

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           +   F  +    F  E         I+   +E  +    I G+      D+  +   L+ 
Sbjct: 61  VFKNFDKVEISDF--EINQNRPVYTIE--TIEKFKPTYFIIGSDNLNLLDKWKNIDKLKN 116

Query: 143 RGEKYGFHTVFIDELRNN------------KSQIVSSSNIRT 172
             E   F      E+ NN             +  +SS+ IR 
Sbjct: 117 MVE---FVVATRGEVNNNLQKKYNIKKVLKMNIPISSTEIRK 155


>gi|254373284|ref|ZP_04988772.1| hypothetical protein FTCG_00867 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571010|gb|EDN36664.1| hypothetical protein FTCG_00867 [Francisella novicida GA99-3549]
          Length = 261

 Score = 45.2 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +ILE +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILESLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 EPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|212696955|ref|ZP_03305083.1| hypothetical protein ANHYDRO_01518 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676043|gb|EEB35650.1| hypothetical protein ANHYDRO_01518 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 279

 Score = 45.2 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 74/251 (29%), Gaps = 44/251 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I+  + +    K      G V  +G    +H GH  ++++A+   +   I V+S
Sbjct: 1   MKVIKKIDELREILKDFKKEGKSIGLVPTMGF---LHKGHASLIKKAVSEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              K+ E +G   +    F  E +          V ++
Sbjct: 55  DFVNPIQFGPNEDLEAYPRDIDADSKLCEDLGADFI----FNPEPSEM-YHDKKAFVDIK 109

Query: 115 WL--------------EVKTV------ITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V TV      I G     FG+  A    I++K           
Sbjct: 110 RLSDNLCGARREGHFRGVCTVCTKLFNIVGPNRAYFGQKDAQQLAIIKKLVFDLNIPVEI 169

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
           +    +R      +SS   R          AA L   +   E + +              
Sbjct: 170 VACPIVREEDGLAMSS---RNTYLSNDERKAA-LCLSKAIFEGEKMANNGASVKEVLRKM 225

Query: 212 NMQLSPDILLK 222
              +S + L K
Sbjct: 226 EEIISSEKLAK 236


>gi|206891060|ref|YP_002248306.1| pantoate--beta-alanine ligase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226700770|sp|B5YJ91|PANC_THEYD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|206742998|gb|ACI22055.1| pantoate--beta-alanine ligase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 280

 Score = 45.2 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V     I + +   L+      G +  +G    +H GH  ++ +A +  +   I ++S
Sbjct: 1   MEVIRIPRIMREISKELRFKGKSIGFIPTMG---ALHEGHLSLIRRAKEEND---IVIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    Q            + ++ LE +    L    F  +  +   E +   V+VE
Sbjct: 55  IFVNPTQFAQGEDYEKYPRDVELDKEKLEALAIDYL----FLPDVNSLYPEGYSTYVVVE 110

Query: 115 WL--------------EVKTVITG-TKF------RFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V T++             FG+       I+++  E   F    
Sbjct: 111 GLSDKLCGIFRPGHFRGVATIVCKLFNIVKPLRAYFGQKDYQQSLIIRRMVEDLNFDVEI 170

Query: 154 I--DELRNNKSQIVSS 167
           I    +R      +SS
Sbjct: 171 IVCPTVREQDGLAMSS 186


>gi|256043118|ref|ZP_05446061.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Brucella
          melitensis bv. 1 str. Rev.1]
 gi|265989551|ref|ZP_06102108.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
          str. Rev.1]
 gi|263000220|gb|EEZ12910.1| riboflavin biosynthesis protein RibF [Brucella melitensis bv. 1
          str. Rev.1]
          Length = 33

 Score = 45.2 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 4  FHNIEINQSLPNHLKGGVVAIGNFDGIH 31
          F  +   + LP  L   VVAIGNFDG+H
Sbjct: 6  FQRLTGTEGLPPALHDCVVAIGNFDGVH 33


>gi|283784076|ref|YP_003363941.1| glycerol-3-phosphate cytidylyltransferase [Citrobacter rodentium
           ICC168]
 gi|282947530|emb|CBG87081.1| glycerol-3-phosphate cytidylyltransferase [Citrobacter rodentium
           ICC168]
          Length = 132

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 32/157 (20%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  IL++A  +     + V   +     I +           S +
Sbjct: 2   KTVITFGTFDVFHVGHLKILQRASALGERLVVGV---SSDALNIRKKGRAPVY--SQSDR 56

Query: 79  EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             IL  + G   +    F  E+    A+       +   +   ++ G  +R      G  
Sbjct: 57  MDILAGIKGVDEV----FLEESLEQKAD------YIRRFQADILVMGDDWR------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L    +   F           ++  VS+++I   +
Sbjct: 101 DNLSWLCKVVYF----------PRTPSVSTTSIIEVI 127


>gi|255326573|ref|ZP_05367650.1| pantetheine-phosphate adenylyltransferase [Rothia mucilaginosa ATCC
           25296]
 gi|255296313|gb|EET75653.1| pantetheine-phosphate adenylyltransferase [Rothia mucilaginosa ATCC
           25296]
          Length = 162

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +  G+FD +H GH  I+ +A ++ +   + V             +S          + +
Sbjct: 3   ALCPGSFDPVHHGHLEIIARAAQLFDEVIVGV-----------AHNSSKKYRFSLEERVQ 51

Query: 81  I----LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKD 132
           +    L+++G   +                 + +   E    K ++ G    T + +   
Sbjct: 52  LVRESLQELGIEGVSVEP-------IPPGVLLAEYAAER-GAKVLVKGLRSATDYSY--- 100

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                        ++      +     ++   VSS+ IR 
Sbjct: 101 -----EAPMASMNRHLAQVETVFLAGEDRYGAVSSTIIRE 135


>gi|71023325|ref|XP_761892.1| hypothetical protein UM05745.1 [Ustilago maydis 521]
 gi|46100767|gb|EAK86000.1| hypothetical protein UM05745.1 [Ustilago maydis 521]
          Length = 1301

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 34/184 (18%)

Query: 21  VVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VVA+G  FD +H+GH ++L  A  IA    I  ++ +     ++   S    L P   + 
Sbjct: 781 VVALGGTFDHLHVGHKILLTMASLIAEQKIIVGVTDD----AMLTKKSDAAVLEPIDERI 836

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-----EVKTVIT------GTKFR 128
             +    F  L+R  FT        +Q ++   V         ++ ++       G +F 
Sbjct: 837 AAVNA--FIGLVRLPFTE-----LDQQVVKLEDVAGPAATEANLQALVVTDETLSGAEFI 889

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ-------IVSSSNIRTALTKGHVLN 181
            GK +           E +    V        K          + S+ IR  L       
Sbjct: 890 DGKRKENGLA----SVENWVIGVVGSQGQTELKGDAKALAESKIGSTAIRKWLVAQGARR 945

Query: 182 AAHL 185
              L
Sbjct: 946 VQAL 949


>gi|297569076|ref|YP_003690420.1| rfaE bifunctional protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924991|gb|ADH85801.1| rfaE bifunctional protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 483

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L+QA ++ +   +  ++ +   R +     P   ++P   + +
Sbjct: 345 VMTNGCFDLLHAGHVSYLKQARQLGDRL-LVAVNDDASVRALKGPGRP---INPLEQRLE 400

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     +I        A  +  + I +VL +      ++ G  +R
Sbjct: 401 VLAGLAAVDWVIP------FAEETPRRLICRVLPD-----VLVKGGDYR 438


>gi|219115605|ref|XP_002178598.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410333|gb|EEC50263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 419

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 24/168 (14%)

Query: 12  SLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
            LP   +   V  IG FD  H GH  +L    +        +     H           +
Sbjct: 242 DLPEGWEDRKVYTIGCFDLFHRGHQNVLLSLREFGYYIVAGI-----HDDESYFKLKNKY 296

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           T+     +    +      +          +     +I+ ++ +               G
Sbjct: 297 TIDNLETRMANAKPF-VDQIYVIP------STDPLLYIKSMVSQQ----------DIDMG 339

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                    +     +    +V +      +++  SS+ IRT      
Sbjct: 340 TCCYARGDDMLNFPGREWVESV-MPVHFVPRTEACSSTLIRTIYHSED 386


>gi|229826620|ref|ZP_04452689.1| hypothetical protein GCWU000182_01996 [Abiotrophia defectiva ATCC
           49176]
 gi|229789490|gb|EEP25604.1| hypothetical protein GCWU000182_01996 [Abiotrophia defectiva ATCC
           49176]
          Length = 129

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 32/157 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  IL +A +  +   + + +          +            +++
Sbjct: 4   VITYGTFDLLHYGHVNILRRAKEYGDYLIVAIST-----DEFNWNEKQKKCYFSYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E +     +I  +        S EQ I+   V+  +V T + G  ++      G    
Sbjct: 59  LVESIRYVDLVIPEE--------SWEQKIED--VKLYKVDTFVMGDDWK------GKFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++         V++      ++  +S++ I+  L K
Sbjct: 103 LKEYC-----EVVYLP-----RTPEISTTQIKNDLQK 129


>gi|254804736|ref|YP_003082957.1| pantoate--beta-alanine ligase [Neisseria meningitidis alpha14]
 gi|254668278|emb|CBA05175.1| pantoate--beta-alanine ligase [Neisseria meningitidis alpha14]
          Length = 278

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 63/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|20094940|ref|NP_614787.1| phosphopantetheine adenylyltransferase [Methanopyrus kandleri AV19]
 gi|31563020|sp|Q8TGY4|COAD_METKA RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|19888182|gb|AAM02717.1| Predicted nucleotidyltransferase of the HIGH superfamily
           [Methanopyrus kandleri AV19]
          Length = 157

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 30/169 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE- 79
           VV  G FD +HLGH  +L  A+++ +   I V + +               + P   +  
Sbjct: 10  VVVGGTFDRLHLGHQRLLSVALELGDRVVIGVTTDS------FVREEGKKGVEPFEERVR 63

Query: 80  ---KILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
              + +E+ G    +              +  +  ++V                  +   
Sbjct: 64  AVRRFVEEKGASDRVEIVPLEDRYGTTLEDDEMDAIVV----------------SPETEP 107

Query: 136 DRGILQKRGEKYGF---HTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
               + +   K GF     V I  + +   + +SSS +R  + +G   +
Sbjct: 108 VALEINELRRKRGFPPLSIVVIPFVLDGDGRKISSSRLRGEVDEGPCRD 156


>gi|299470133|emb|CBN78162.1| Putative NIN-like transcription factor [Ectocarpus siliculosus]
          Length = 584

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 171 RTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP--DILLKE---GV 225
           R A T      A  L       +  +    +  + LG PTANM +    + ++ +   G+
Sbjct: 79  RQA-TSSDPDIARQLARLYCRRDEVIDGFGRGSKLLGIPTANMDMKEVGERVVHDTTTGI 137

Query: 226 YAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLL 258
           Y   +   D T Y  V + G NP        +L
Sbjct: 138 YFG-YAMLDGTVYPAVISVGWNPYFDNKSKTVL 169


>gi|195174070|ref|XP_002027805.1| GL16316 [Drosophila persimilis]
 gi|194115481|gb|EDW37524.1| GL16316 [Drosophila persimilis]
          Length = 517

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 50/175 (28%), Gaps = 31/175 (17%)

Query: 19  GGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
             VV  G FD IHLGH       +L    ++        ++         +S +    + 
Sbjct: 143 PSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTAAMT---------KSKTLPDLIL 193

Query: 74  PPSIQEKILEKM--GFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           P   +  +L +      + +                +  +            ++   +  
Sbjct: 194 PVEERIALLREFLTDIDSTLQYEIVPIDDPFGPTQHDPDMDM----------IVVSAETL 243

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLN 181
            G  +  +    ++  E   F    ++   N+      +SSSN R  L       
Sbjct: 244 RGGQKVNEIRSGKQLRELDIFVIDIVESNVNDGIHETKISSSNTRIDLLGSRWRK 298


>gi|119489028|ref|ZP_01621963.1| probable cytidyltransferase [Lyngbya sp. PCC 8106]
 gi|119454984|gb|EAW36127.1| probable cytidyltransferase [Lyngbya sp. PCC 8106]
          Length = 170

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           E+  S     +  V+  G FD IH GH   L+QA  +        NS  +V +  P    
Sbjct: 20  EVIASNTRAWRPLVLTNGCFDLIHAGHIRYLQQAKILGRSLVVGLNSDSSVQTIKP---- 75

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
             Q   P   + P   + ++L  +    A++   F   TA    E F  ++ V+ 
Sbjct: 76  -AQPGLPSRPIVPQMQRAEVLAALKPVDAVVI--FGEATATQLIEIFKPEIYVKG 127


>gi|322371822|ref|ZP_08046365.1| cytidyltransferase-related domain protein [Haladaptatus
           paucihalophilus DX253]
 gi|320548707|gb|EFW90378.1| cytidyltransferase-related domain protein [Haladaptatus
           paucihalophilus DX253]
          Length = 159

 Score = 45.2 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 27/157 (17%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFN---PHPRTIIQSSSPIFTLSPPS 76
           VA+G  FD +H GH  + E+A ++ +   +TV L+ +   P  R +         + P  
Sbjct: 3   VALGGTFDPVHDGHRALFERAFELGD---VTVGLTSDDLAPATRNV------DRYVRPFE 53

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +++ LE         Y    +    +    I        +   +I   + + G +R   
Sbjct: 54  ERKRALESELRDFADDYDREFDVRKLTEPTGIATEE----QFDVLIVSPETKHGGER--- 106

Query: 137 RGILQKRGEKYGF---HTVFIDELRNNKSQIVSSSNI 170
              + +   + GF     V +  +      I+SS+ I
Sbjct: 107 ---INELRAERGFDPLEIVVVPHVTAEDGDIISSTRI 140


>gi|52424713|ref|YP_087850.1| TagD protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306765|gb|AAU37265.1| TagD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 152

 Score = 45.2 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 35/167 (20%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   ++  G FD  H+GH  +L++  K+ +   + V +                T+ P  
Sbjct: 1   MAKTIITYGTFDLFHIGHLRLLQRLKKLGDKLIVAVSTDE------FNEGKGKKTVIPYE 54

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRA 134
            + +I+  +     +I               + QK+  V+  +V     G  +       
Sbjct: 55  QRAEIVANIKCVDLVI-----------PETAWEQKITDVQKYDVDVFAIGNDW------E 97

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           G    L++            D +   +++ +SS+ ++  L    +  
Sbjct: 98  GKFDFLKEYC----------DVVYLERTKDISSTQLKQTLKSFSISK 134


>gi|68643263|emb|CAI33539.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
           ++  G FD +H GH  +L++A ++ +   I V+S +       ++  + +   +    + 
Sbjct: 4   IITYGTFDLLHYGHISLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNYEHRKN 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +        +I           S EQ  +K  V+   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKSDVKEYHIDTFVMGDDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    E+ G   V++      +++ +S++ I+  L++
Sbjct: 103 L----EEEGVEVVYLP-----RTKEISTTKIKEDLSE 130


>gi|313637008|gb|EFS02583.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
          Length = 390

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++ N +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTNPDVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            ++     F+ + A   AE+ I+ +  + L + ++  G++  +  D +
Sbjct: 66  IVVELPVAFSTQHATIFAEESIRIL--DALHINSLFFGSEHGYANDFS 111


>gi|307706589|ref|ZP_07643396.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus mitis
           SK321]
 gi|307618044|gb|EFN97204.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus mitis
           SK321]
          Length = 132

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 33/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +         +             ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKALGDYLIVGLST-----NEFNRLEKNKECYFDYEERKS 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   +E       + G  +       G   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWDQKTSDIEKYHADVFVIGDDW------QGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L       G   V++      +++ +S+S I+  L +G+
Sbjct: 102 YLSDL----GIEVVYLS-----RTKEISTSKIKNDLNQGN 132


>gi|296111914|ref|YP_003622296.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc kimchii
           IMSNU 11154]
 gi|295833446|gb|ADG41327.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc kimchii
           IMSNU 11154]
          Length = 143

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 63/164 (38%), Gaps = 36/164 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L++A ++ +   + + +  FN H       +    T      +
Sbjct: 4   VITYGTFDMLHYGHINLLKRAKEMGDYLIVALSTDEFNWH-------AKQKKTYFSYEKR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGD 136
           +++LE +     +I             E + QK   V+  +V T + G  +      AG 
Sbjct: 57  KQLLEAIRYVDLVI-----------PEESWDQKTSDVKLYQVDTFVMGDDW------AGQ 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
              +Q++ +    +     E        +S++ I+  L    + 
Sbjct: 100 FDFIQEKTDAKVVYLARTPE--------ISTTQIKKDLNTKDLA 135


>gi|208779660|ref|ZP_03247005.1| pantoate--beta-alanine ligase [Francisella novicida FTG]
 gi|208744621|gb|EDZ90920.1| pantoate--beta-alanine ligase [Francisella novicida FTG]
          Length = 261

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +ILE +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILESLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 QPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|325920793|ref|ZP_08182694.1| FAD synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548690|gb|EGD19643.1| FAD synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 33

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)

Query: 2  HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHH 35
           +F ++E     P   +G VV IG FDG+HLGH 
Sbjct: 3  RLFRDVEGGTLFP---RGSVVCIGAFDGLHLGHR 33


>gi|34541651|ref|NP_906130.1| glycerol-3-phosphate cytidylyltransferase [Porphyromonas gingivalis
           W83]
 gi|188995917|ref|YP_001930169.1| putative glycerol-3-phosphate cytidylyltransferase [Porphyromonas
           gingivalis ATCC 33277]
 gi|34397969|gb|AAQ67029.1| glycerol-3-phosphate cytidylyltransferase [Porphyromonas gingivalis
           W83]
 gi|188595597|dbj|BAG34572.1| putative glycerol-3-phosphate cytidylyltransferase [Porphyromonas
           gingivalis ATCC 33277]
          Length = 152

 Score = 44.8 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 31/164 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD  H  H  ++  A  +A+   + V +       ++ S      + P   + +
Sbjct: 8   VYTSGTFDMFHYNHLRMINYARSLADILIVGVST-----DELVASYKAPPII-PFIERLQ 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ILE +    ++  + TL+             +V+ L +   + G  +       G    L
Sbjct: 62  ILEALKTPDIVIPQHTLD----------HTEIVKKLNIDAFVVGDDWN------GKYDYL 105

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           +  G         +          VSS+ I+  +   +      
Sbjct: 106 KDLG---------VQVFYFPYGTGVSSTKIKETIHDSYAKTLNE 140


>gi|68642831|emb|CAI33173.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   I V+S +                     ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNFEHRKN 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E +     +I           S EQ  +K  ++   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKTDIKEYRIDTFVMGDDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    ++ G   V++      +++ +S++ I+  L  
Sbjct: 103 L----KEEGVEVVYLP-----RTKEISTTKIKEDLAD 130


>gi|15828568|ref|NP_325928.1| lipopolysaccharide core biosynthesis protein KDTB-like protein
           [Mycoplasma pulmonis UAB CTIP]
 gi|29427966|sp|Q98RB3|COAD_MYCPU RecName: Full=Probable phosphopantetheine adenylyltransferase;
           AltName: Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|14089510|emb|CAC13270.1| LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN KDTB HOMOLOG
           [Mycoplasma pulmonis]
          Length = 149

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 33/158 (20%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AI  G+FD  H GH  IL +A+ + +     V++ NP             T +    ++
Sbjct: 7   IAIFPGSFDPFHNGHKHILNKALALFD-LVYLVITINP----------DKITKTSFDQRK 55

Query: 80  KILEKMGFSALIRYKFTLETAN-YSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +LE           F          +  +   + + L  K +I        +    D  
Sbjct: 56  TLLENE------ILDFDKSRVQVLVNKDSLTAEIAKKLGAKFII--------RSARNDID 101

Query: 139 I-----LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
                 L    +K       I    +     ++S+ IR
Sbjct: 102 YQYELVLAAGNKKINNEVETILIFPDYDKIEINSTLIR 139


>gi|256827023|ref|YP_003150982.1| Glycerol-3-phosphate cytidylyltransferase [Cryptobacterium curtum
           DSM 15641]
 gi|256583166|gb|ACU94300.1| Glycerol-3-phosphate cytidylyltransferase [Cryptobacterium curtum
           DSM 15641]
          Length = 139

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 61/154 (39%), Gaps = 29/154 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H GH  +L++A ++ +   + V +           +       P   ++ 
Sbjct: 4   VITYGTFDLFHYGHVNLLKRARELGDYLIVAVST-----DEFNWEAKGKKCYFPYEQRKS 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++E + F  L+  +        S +Q +    ++   + T + G  +   KDR      L
Sbjct: 59  LVESVRFVDLVIPE-------TSWDQKLSD--IKRYHIDTFVIGDDW---KDR---FNFL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           ++     G   V++      ++  +S++ I+  L
Sbjct: 104 EEA----GVEVVYVP-----RTPEISTTQIKADL 128


>gi|117924369|ref|YP_864986.1| cytidyltransferase-like protein [Magnetococcus sp. MC-1]
 gi|117608125|gb|ABK43580.1| cytidyltransferase-related domain [Magnetococcus sp. MC-1]
          Length = 508

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 24/153 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L++A +      + V++           + P+F   P  ++ + L  
Sbjct: 32  GTFDLLHPGHMRHLQRARE---QGDVLVVTLTADGFVNKGPNRPVF---PEHLRAESLAS 85

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR-AGDRGILQK 142
           +     +       +     A        +  +     + G  ++  KD   G+  + + 
Sbjct: 86  LTYVDYVAV---NYDLTAVPA--------ITKVRPNVYVKGQDYKQAKDDITGNIALERH 134

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             E +G    F +E+        SSS I   L 
Sbjct: 135 AVEVHGGEIFFTEEI-----VFSSSSLINDYLD 162


>gi|222153441|ref|YP_002562618.1| phosphopantetheine adenylyltransferase [Streptococcus uberis 0140J]
 gi|254764176|sp|B9DUX7|COAD_STRU0 RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|222114254|emb|CAR42862.1| phosphopantetheine adenylyltransferase [Streptococcus uberis 0140J]
          Length = 166

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 29/155 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+ +A ++ ++  I V  FNP  +                 +  +L++
Sbjct: 10  GSFDPVTNGHMDIIARASQLFDHLYIGVF-FNPEKKGFF----------DLETRINVLKE 58

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
                          +  SA   +   L + L V  ++ G    T F +  +       L
Sbjct: 59  ALVDY-------PNISVVSAADSLAVDLAKSLGVTHMVRGLRNPTDFEYESN-------L 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +    +       I  + +N  Q +SSS ++  + 
Sbjct: 105 EFFNNRLDPSIDTIYFIAHNLMQPISSSRVKELIH 139


>gi|317504434|ref|ZP_07962414.1| cytidylyltransferase domain protein [Prevotella salivae DSM 15606]
 gi|315664451|gb|EFV04138.1| cytidylyltransferase domain protein [Prevotella salivae DSM 15606]
          Length = 438

 Score = 44.8 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 76/247 (30%), Gaps = 58/247 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---FNPHPRTIIQSSSPIFTLSPPSI 77
           V+  G +D IH GH  +LE+A  + +   + V +   F+       ++   I        
Sbjct: 4   VITYGTYDLIHKGHIRLLERAKALGDYLVVGV-TADNFD-------RARGKINVQQSLIE 55

Query: 78  QEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + + + + G    +I  ++          +  +   ++ L +     G+ ++      G 
Sbjct: 56  RIENVRQTGLADEIIVEEY----------EGQKIDDIKRLGIDIFTVGSDWK------GH 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA-------------LTKGHVLNAA 183
              L +  +           +  +++Q +SSS +R               +    V  A 
Sbjct: 100 FDYLNEYCKV----------VYLDRTQGISSSELRAEKCDIHLGLIGESPILNKIVREAN 149

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFP---TANMQLSPDILLKEGVYAIRFRTQDQTSYSG 240
           ++ G   +      H +        P   T +            VY I            
Sbjct: 150 YVNGLHVSGIYSRSHFKLNSNIKDIPSYETIDELFDNC----NAVYIISSPVSHYEDIKK 205

Query: 241 VANFGRN 247
             N G N
Sbjct: 206 ALNHGLN 212


>gi|308389043|gb|ADO31363.1| putative pantoate--beta-alanine ligase [Neisseria meningitidis
           alpha710]
 gi|325129997|gb|EGC52791.1| pantoate--beta-alanine ligase [Neisseria meningitidis OX99.30304]
 gi|325135921|gb|EGC58531.1| pantoate--beta-alanine ligase [Neisseria meningitidis M0579]
          Length = 278

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLELVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|13377461|gb|AAK20720.1|AF316642_14 Gct [Streptococcus pneumoniae]
 gi|68643289|emb|CAI33564.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
 gi|68643318|emb|CAI33588.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
           V+  G FD +H GH  +L++A ++ +   I V+S +       ++  + +   +    + 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNYEHRKN 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +        +I           S EQ  +K  V+   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKSDVKDYHIDTFVMGDDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    E+ G   V++      +++ +S++ I+  L++
Sbjct: 103 L----EEEGVEVVYLP-----RTKEISTTKIKEDLSE 130


>gi|116492478|ref|YP_804213.1| nucleotidyltransferase [Pediococcus pentosaceus ATCC 25745]
 gi|122266058|sp|Q03GA1|Y710_PEDPA RecName: Full=UPF0348 protein PEPE_0710
 gi|116102628|gb|ABJ67771.1| Predicted nucleotidyltransferase [Pediococcus pentosaceus ATCC
           25745]
          Length = 366

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
               I  F+  H GH  +LEQA K+     + V+         +Q   P   L     + 
Sbjct: 3   ACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVI----MSGNFVQRGEPA--LINKWERA 56

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKF 127
           ++    G   ++      E A  SA++F      + + L    +  G++ 
Sbjct: 57  RVAINCGADLVVEIP--TEYAIDSAKEFAHAGVEIAQKLGASFLAFGSEN 104


>gi|299138573|ref|ZP_07031751.1| pantoate/beta-alanine ligase [Acidobacterium sp. MP5ACTX8]
 gi|298599209|gb|EFI55369.1| pantoate/beta-alanine ligase [Acidobacterium sp. MP5ACTX8]
          Length = 288

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 57/222 (25%), Gaps = 42/222 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGG---------VVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +   I   Q     LK           V  +G    +H+GH  ++  A    +     
Sbjct: 1   MRICRTISEMQQACRELKRSTAQERGLGFVPTMG---ALHVGHLSLVAAARAECD---AV 54

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL----------ETAN 101
           V S   +PR                   + LE  G   L                 E A 
Sbjct: 55  VASIFVNPRQFGVGEDYEIYPREFEEDCRKLESAGVEILFAPTVDEMYRPGATTFVEVAG 114

Query: 102 YSAEQFIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI 154
            S           +  V TV+       G     FG+  A    +L+       F    I
Sbjct: 115 ISDRLDGASRPGHFRGVATVVVKLFNIVGPDKAYFGQKDAAQVAVLRAMVRDLNFPVELI 174

Query: 155 D--ELRNNKSQIVSSSNI--------RTALTKGHVLNAAHLL 186
                R +    +SS N         R  +    +  A  L 
Sbjct: 175 ACTTAREDDGLAMSSRNRYLSAEERQRALVLSHALQAAKSLA 216


>gi|110835151|ref|YP_694010.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Alcanivorax borkumensis SK2]
 gi|118573566|sp|Q0VM60|HLDE_ALCBS RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|110648262|emb|CAL17738.1| LPS biosynthesis protein RfaE [Alcanivorax borkumensis SK2]
          Length = 476

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +      +  V   G FD IH GH   L+ A +  +   + V + +   R +     P  
Sbjct: 334 EDARAQGERIVFTNGCFDIIHAGHVGYLDTARRQGDRLVLAV-NGDESIRRLKGPGRP-- 390

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++P   +  +L  +     ++ +         + E  ++ +     +   ++ G  +  
Sbjct: 391 -INPLERRMAVLAALEAVDWVVAFDTD------TPEPLLESI-----KPDVLVKGGDYSV 438

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                 D+ +  +  + YG     +D + +     +S++ I   + +  
Sbjct: 439 ------DQVVGHEFVKSYGGEVKVLDFIDD-----ISTTKIVERIREKD 476


>gi|33358183|pdb|1UFV|A Chain A, Crystal Structure Of Pantothenate Synthetase From Thermus
           Thermophilus Hb8
 gi|33358184|pdb|1UFV|B Chain B, Crystal Structure Of Pantothenate Synthetase From Thermus
           Thermophilus Hb8
          Length = 276

 Score = 44.8 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 77/266 (28%), Gaps = 54/266 (20%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+  +LP    G V   G    +H GH  ++E+A      +P  V S   +P        
Sbjct: 9   ELRAALPREGVGFVPTXGY---LHRGHLALVERAR---RENPFVVASVFVNPLQFGPGED 62

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG--- 124
                        +L++ G   L    F         E F  +V VE   +  +  G   
Sbjct: 63  YHRYPRDLERDRALLQEAGVDLL----FAPGVEEXYPEGFATRVQVEG-PLTALWEGAVR 117

Query: 125 --------------------TKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKS 162
                                +  FG+       ++++     GF    V +  +R    
Sbjct: 118 PGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRXVRDLGFPVEVVGVPTVREEDG 177

Query: 163 QIVSSSNI--------------RTALTKGHVL----NAAHLLGYRFTIESDVIHGEKIGR 204
             +SS N+              R  L    V     + A  L         V    K   
Sbjct: 178 LALSSRNVYLSPETRKKAPVLYRALLAXREVAGQGGSVAEALRAGEEALRAVPEFRKDYL 237

Query: 205 TLGFPTANMQLSPDILLKEGVYAIRF 230
            +  P   + LS  +    G+ A RF
Sbjct: 238 AIVHPETLLPLSDWVAGARGIVAGRF 263


>gi|212634446|ref|YP_002310971.1| cytidyltransferase-like protein [Shewanella piezotolerans WP3]
 gi|212555930|gb|ACJ28384.1| Cytidyltransferase-like protein [Shewanella piezotolerans WP3]
          Length = 154

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 54/164 (32%), Gaps = 41/164 (25%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPS 76
             ++  G FD  H GH  + ++   + +   + V +  FN      ++  +  F      
Sbjct: 2   KTIITYGTFDLFHYGHVRLFKRLKALGDKLIVAVSTDEFN-----ALKGKAAFF---SYL 53

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE--WLEVKTVITGTKFRFGKDR 133
            + +I+E       ++             E   Q+   +    ++     G  ++     
Sbjct: 54  QRAEIVEACKYVDMVV------------PETHWQQKAKDICKYDISIFAMGDDWK----- 96

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            G+   L              D +  +++  +SS+ I+ +L   
Sbjct: 97  -GEFDELSILC----------DVVYLDRTGEISSTEIKNSLADR 129


>gi|283769086|ref|ZP_06341991.1| putative glycerol-3-phosphate cytidylyltransferase [Bulleidia
           extructa W1219]
 gi|283104272|gb|EFC05650.1| putative glycerol-3-phosphate cytidylyltransferase [Bulleidia
           extructa W1219]
          Length = 441

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 56/155 (36%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +LE+A  + +   + V S  F+       +    I        +
Sbjct: 4   VITYGTYDLLHFGHIRLLERAKALGDYLVVGVTSDGFD-------KIRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + ++  G    +I  ++          +  +   +  L +     G+ +       G  
Sbjct: 57  IEAVKATGIADEIIVEEY----------EGQKIDDIRRLGIDIFTVGSDW------VGYF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L++  E           +  ++++ +SS+ IR 
Sbjct: 101 DYLKEYCEV----------VYLDRTKGISSTEIRQ 125


>gi|169342623|ref|ZP_02863667.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens C str.
           JGS1495]
 gi|169299265|gb|EDS81334.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens C str.
           JGS1495]
          Length = 345

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSIQEKILEKMGFSAL 90
            GH  ++E+A K  +   + +L+               +  L    ++  ++ + G   +
Sbjct: 170 KGHKYLIEKASKENDVVHLFILT--EDKSEFSTKDRINMVKLGTKHLKNVLIHEAGKYII 227

Query: 91  IRYKFTLETAN-----YSAEQFI-----QKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
               F             A  ++      + + + L +K    G +  F          +
Sbjct: 228 SSATFPSYFIKEQKNITKAHAYLDLTLFCEYISKALNIKYRYVGEE-PFSNLTNEYNQYM 286

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           ++   KY    + +  L+ N  + +S+S++R+ L +G++     L
Sbjct: 287 KEILPKYNIQVIEVKRLKEN-GKAISASSVRSFLKEGNLEKVESL 330


>gi|23464824|ref|NP_695427.1| glycerol-3-phosphate cytidylyltransferase [Bifidobacterium longum
           NCC2705]
 gi|23325406|gb|AAN24063.1| probable glycerol-3-phosphate cytidylyltransferase [Bifidobacterium
           longum NCC2705]
          Length = 130

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A    +   + + +          +            +++
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKAYGDYLIVGLSTDE------FNAGKGKKAYFSYDQRKE 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL--EVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             EQ  ++   + L  +V T + G+ +      AG  
Sbjct: 58  LLESLRYVDLVI------------PEQTWEQKRNDILLYQVDTFVMGSDW------AGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L              D +   ++  +SSS I+  L   +
Sbjct: 100 DDLSDIC----------DVIYLPRTPEISSSKIKNDLEHRN 130


>gi|170078638|ref|YP_001735276.1| cytidyltransferase-like protein [Synechococcus sp. PCC 7002]
 gi|169886307|gb|ACB00021.1| cytidyltransferase-related domain containing protein [Synechococcus
           sp. PCC 7002]
          Length = 128

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSS 67
           P+  +  V   G FD +H+GH   L  A ++        N   +V    P P  +     
Sbjct: 18  PDRWRPLVFTNGCFDLLHVGHVRYLTAAKQLGKTLVIGLNGDRSVAGLKPQPDHL--PDR 75

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           P   + P + + ++L  +     +   F   TA  +       + V+ 
Sbjct: 76  P---IIPEAQRAELLTALAVVDAVVL-FDEPTATQTIAALQPDIYVKG 119


>gi|332159016|ref|YP_004424295.1| glycerol-3-phosphate cytidyltransferase, putative [Pyrococcus sp.
           NA2]
 gi|331034479|gb|AEC52291.1| glycerol-3-phosphate cytidyltransferase, putative [Pyrococcus sp.
           NA2]
          Length = 148

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           FD IH+GH   L+ A ++ +   + V     H  T+ +       ++P   + ++L  + 
Sbjct: 15  FDIIHVGHIHFLKMAKELGDELIVIVA----HDETVKKRKGRPP-INPAEDRAEVLRAIR 69

Query: 87  -FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
               ++  +             I   L++ L+   +  G    F   R      L++  +
Sbjct: 70  YVDDVVIGEPGE----------ISLELIKKLKPDVIALGPDQDFDCRR------LKEMLK 113

Query: 146 KYGFHTVFID-ELRNNKSQIVSSSNIRTALT 175
           K G     I       + +  +S  IR  + 
Sbjct: 114 KEGLDVEVIRLPYLYKEDRAKTSKIIRRIIE 144


>gi|261838655|gb|ACX98421.1| nicotinate-nucleotide adenyltransferase [Helicobacter pylori 51]
          Length = 174

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GIDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 172


>gi|145590371|ref|YP_001152373.1| phosphopantetheine adenylyltransferase [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282139|gb|ABP49721.1| cytidyltransferase-related domain [Pyrobaculum arsenaticum DSM
           13514]
          Length = 153

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 30/168 (17%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G VV  G FD +H GH  +L  A  I     I  L+ +        S+   + + P +++
Sbjct: 6   GNVVLGGTFDTLHSGHVKLLATAALIGEKVLIG-LTSD-----AFASTYKQYKVKPFAVR 59

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------EVKTVITGTKFRFG 130
              L  +              A+ + E+ +    +            ++ ++   +    
Sbjct: 60  LANLRTL-------------MASIAPEREVTYAEINDPFGPAVSDPRLEAIVASIET--- 103

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             RA      + +        V I  +R+    I+SS+ IR  L +  
Sbjct: 104 APRALQINDERAKRGLRPMEVVVISTVRDGFGHILSSTYIRRVLEQSK 151


>gi|68643347|emb|CAI33613.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
           V+  G FD +H GH  +L++A ++ +   I V+S +       ++  + +   +    + 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNYEHRKN 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +        +I           S EQ  +K  V+   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKSDVKEYRIDTFVMGDDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    E+ G   V++      +++ +S++ I+  L++
Sbjct: 103 L----EEEGVEVVYLP-----RTKEISTTKIKEDLSE 130


>gi|289435390|ref|YP_003465262.1| hypothetical protein lse_2029 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171634|emb|CBH28180.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 390

 Score = 44.4 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++ N +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTNPDVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            ++     F+ + A   AE+ ++ +  + L + ++  G++  +  D +
Sbjct: 66  IVVELPVAFSTQHATIFAEESVRIL--DALHINSLFFGSEHGYANDFS 111


>gi|257876672|ref|ZP_05656325.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus
           casseliflavus EC20]
 gi|257810838|gb|EEV39658.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus
           casseliflavus EC20]
          Length = 133

 Score = 44.4 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 32/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A +  +   + + +          +            +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRAKEQGDYLIVALST-----DEFNWNEKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  V+   V T + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEEGWAQKVSDVKEYHVDTFVMGDDW------AGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +Q+  +    +     E        +S++ I+  L   +
Sbjct: 102 FIQEETDAEVIYLARTPE--------ISTTQIKKDLKLNN 133


>gi|147676556|ref|YP_001210771.1| pantoate--beta-alanine ligase [Pelotomaculum thermopropionicum SI]
 gi|189036426|sp|A5D5T5|PANC_PELTS RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|146272653|dbj|BAF58402.1| panthothenate synthetase [Pelotomaculum thermopropionicum SI]
          Length = 282

 Score = 44.4 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 33/175 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++ +A +  +     V+S   +P     +             
Sbjct: 25  GFVPTMGY---LHEGHLELMRRAKERCD---TVVISIFVNPTQFGPNEDYDRYPRDLERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVI-- 122
            ++  ++G  A+    F           +   V VE L               V TV+  
Sbjct: 79  ARLAGQVGVDAI----FNPSVEEMYPAGYCTYVDVERLTGKLCGLSRPGHFRGVCTVVTK 134

Query: 123 ----TGTKFR-FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNI 170
                   +  FG+  A    ++++           + +  +R      +SS N+
Sbjct: 135 LFNIVKPDYAFFGQKDAQQALVIKRMAADLNMDLEVITVPTVREADGLAMSSRNV 189


>gi|313124521|ref|YP_004034780.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312281084|gb|ADQ61803.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|325126443|gb|ADY85773.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
 gi|325685411|gb|EGD27513.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. lactis DSM 20072]
          Length = 154

 Score = 44.4 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 35/161 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A    +   + + +          +S    T      +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRAKAQGDYLIVALST-----DEFNWNSKHKKTYFSYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE--WLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E    +   +     + T + G  ++      G  
Sbjct: 59  LLEAIRYVDLVI------------PENDWDQKRSDMHEYHIDTFVMGDDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L    ++ G + V++      ++  +SSS I+  L   +
Sbjct: 101 DFL----KEEGVNVVYLP-----RTPEISSSKIKHDLYDAN 132


>gi|50309059|ref|XP_454535.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643670|emb|CAG99622.1| KLLA0E12981p [Kluyveromyces lactis]
          Length = 308

 Score = 44.4 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 1  MHVFHNI------EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M V   +         +++ N   G V  +G    +H GH  +++Q+IK       TV+S
Sbjct: 1  MQVLRTVAEVRAWRKQENVRNEDVGFVPTMGC---LHEGHASLIQQSIKDNK---FTVVS 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +P     +             +K+LE++G  A+  
Sbjct: 55 IFVNPSQFAPTEDLDKYPRTLDADKKLLEELGVDAVFV 92


>gi|302390911|ref|YP_003826731.1| pantothenate synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202988|gb|ADL11666.1| pantothenate synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 282

 Score = 44.4 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 33/211 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  +I+  +      +        V  +G F   H GH  ++E+A +  +   I V+S
Sbjct: 1   MELCKSIDEVRDFIGKQQKAGKEVGLVPTMGYF---HQGHLALMEKAREEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                    ++ E+ G   +   +      + +A + + + L +
Sbjct: 55  LFVNPTQFGPDEDYNEYPRDLDRDLELAEEAGVDIVFAPEADEVYLSQAATKVMVEGLTD 114

Query: 115 WL----------EVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGF--HTVFID 155
           +L           V T++T         +  FG+  A    ++++  +   F    V + 
Sbjct: 115 YLCGAAREGHFTGVCTIVTKLFNIIDPDRAYFGQKDAQQVLVIKRLVKDLNFDLEIVTVT 174

Query: 156 ELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             R      +SS N    L       A  L 
Sbjct: 175 IQREEDGLAISSRN--KYLDSKEREAATILY 203


>gi|311896799|dbj|BAJ29207.1| putative pantoate--beta-alanine ligase [Kitasatospora setae
           KM-6054]
          Length = 301

 Score = 44.4 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 31/171 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A +         ++   +P                     
Sbjct: 44  VMTMG---ALHEGHAALVRAARRQVGQDGRVAVTVFVNPLQFGAGEDLDRYPRTLDEDLA 100

Query: 81  ILEKMGFSALI------RYKFTLETANYSA---------------EQFIQKVLVEWLEVK 119
           + E+MG   +        Y         SA                  +  ++ + L + 
Sbjct: 101 LAEEMGADVVFAPSVDEVYPNGEPLVRISAGPMGEGFEGAARPGHFDGVLTIVAKLLHIT 160

Query: 120 TVITGTKFR-FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
                  F  FG+  A    ++++      F      +  +R      +SS
Sbjct: 161 D----PDFAVFGEKDAQQLALVRRMVADLDFDVEVVGVPTVREEDGLALSS 207


>gi|152994287|ref|YP_001339122.1| cytidyltransferase-like protein [Marinomonas sp. MWYL1]
 gi|150835211|gb|ABR69187.1| cytidyltransferase-related domain [Marinomonas sp. MWYL1]
          Length = 512

 Score = 44.4 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 29/184 (15%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H   IN    +  K  V+A+G FD  H+GH   L  A        + V    P   +++ 
Sbjct: 347 HISSINNPKISERKKRVLALGYFDLFHIGHLNYLRYAKSKGEQLIVGV---APDSFSLLS 403

Query: 65  SSSPIFTLSPPSIQEKILEKM-GFS----ALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
                  +     ++ ++E +         L+R   T   A +          ++ L++ 
Sbjct: 404 KGYGP--IQTEIERKTLIENLAEVDDAQLVLVRMDDTENAATW----------IKSLDID 451

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           TV+ G +++ G  R      +    +        I  L   K+Q +S++ ++  + + + 
Sbjct: 452 TVVCGEEWQ-GSSRWKKLETILNSMQ--------ITVLYAPKTQEISTTILKKRMHQNYY 502

Query: 180 LNAA 183
            +  
Sbjct: 503 ESMH 506


>gi|293603154|ref|ZP_06685587.1| bifunctional protein hldE [Achromobacter piechaudii ATCC 43553]
 gi|292818385|gb|EFF77433.1| bifunctional protein hldE [Achromobacter piechaudii ATCC 43553]
          Length = 162

 Score = 44.4 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 13/114 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L+QA ++     + V + +   R + + +     L+    
Sbjct: 27  RPLVFTNGVFDILHRGHATYLDQAAQLGATLVVAVNT-DESVRRLGKGAERP--LNRMED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +  +L  +G   ++           + E  I       ++   ++ G  +   K
Sbjct: 84  RAALLAALGCVTVV-----TSFHEDTPEALI-----GQIKPDLIVKGGDYDMEK 127


>gi|57242582|ref|ZP_00370519.1| pantoate--beta-alanine ligase [Campylobacter upsaliensis RM3195]
 gi|57016511|gb|EAL53295.1| pantoate--beta-alanine ligase [Campylobacter upsaliensis RM3195]
          Length = 282

 Score = 44.4 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 25/143 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLS 54
           M + +NI+  +++    K   ++IG    +      H GH  ++++A   + N  I V  
Sbjct: 1   MQIINNIKDLKNIIKKWKNQGLSIGY---VPTMGYLHEGHLSLIKKA---SKNDKIIVSI 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F   P     +              K+ E  G + L    FT        + F   V + 
Sbjct: 55  FVN-PMQFGVNEDLATYPRDLERDAKLCENEGVAVL----FTPSVEQMYPKDFSSYVDMN 109

Query: 115 WLEVKTVITGTKFRFGKDRAGDR 137
            L        T    G  R G  
Sbjct: 110 SL--------TDKLCGAKREGHF 124


>gi|189499526|ref|YP_001958996.1| pantoate--beta-alanine ligase [Chlorobium phaeobacteroides BS1]
 gi|238692268|sp|B3EMN7|PANC_CHLPB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|189494967|gb|ACE03515.1| pantoate/beta-alanine ligase [Chlorobium phaeobacteroides BS1]
          Length = 288

 Score = 44.4 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 72/236 (30%), Gaps = 44/236 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + ++    Q     L+        V+ +G    +H GH  +++ A +    +   +L+
Sbjct: 1   MQIINDPTEMQKTAESLRLKHQFIAVVMTMG---ALHEGHLSLIKLAKER---AGSVILT 54

Query: 55  FNPHPRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +PR              P      +    G   L    F  +      E F  +V  
Sbjct: 55  IFVNPRQ-FGPEEDFQRYPRPLEKDASMARSAGVDYL----FAPDPELIYPEAFQTQVST 109

Query: 114 EWL--------------EVKTVITGTKFR-------FGKDRAGDRGILQKRGEKYGFHTV 152
             +               + TV+             FG+  A    ++++    +   T 
Sbjct: 110 GDIATRFEGAARPGHFDGMATVVLKLLLLSKAHLAVFGEKDAQQLAVIKQMVRDFNIDTT 169

Query: 153 FI--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +    +R +    +SS NI   L+      A  L         +++H ++    L
Sbjct: 170 ILGAPTVRESDGLAISSRNI--YLSSEERKQATVLNESMCRAR-ELLHMKQTDCKL 222


>gi|294615282|ref|ZP_06695158.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1636]
 gi|294619047|ref|ZP_06698542.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1679]
 gi|291591840|gb|EFF23473.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1636]
 gi|291594708|gb|EFF26090.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1679]
          Length = 136

 Score = 44.4 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 32/163 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A +  +   + + +          ++           +++
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQYGDYLIVALST-----DEFNWNAKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  ++       + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWEQKVKDIKEYHADYFVMGDDW------AGQFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L++  +    +     E        +S++ I+  L   +   
Sbjct: 102 ELEQLTDAQVIYLPRTPE--------ISTTQIKNELNSLNSDK 136


>gi|68643135|emb|CAI33435.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 133

 Score = 44.4 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 33/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I V+S +        +            ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKSLGDYL-IVVISTD----EFNWNEKQKKCYFTYEQRKT 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++E +     +I             E + QKV  V    + T + G  ++      G   
Sbjct: 59  LVEAVRYVDLVI-----------PEESWEQKVTDVHEYHIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L    EK G   V++      ++  +S++ I+ +L    
Sbjct: 102 FL----EKEGVEVVYLS-----RTPEISTTEIKNSLATRE 132


>gi|217033653|ref|ZP_03439081.1| hypothetical protein HP9810_899g89 [Helicobacter pylori 98-10]
 gi|216943999|gb|EEC23433.1| hypothetical protein HP9810_899g89 [Helicobacter pylori 98-10]
          Length = 171

 Score = 44.4 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I++Q +++   + + VL   P  +   +   P F  +    +E     
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFAKLIVL---PAYQNPFK--KPCFLDAQTRFKELKRAL 69

Query: 85  MGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            G   ++   F    E A  + E  I    +   +   ++ G           +   L K
Sbjct: 70  KGMDRVLLSDFEIKQERAVPTIESVIHFQKLYRPQTLYLVIGADCLRHLSSWTNAKELLK 129

Query: 143 RGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           R E   F  +  +E++              +SSS IR +L
Sbjct: 130 RVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|104774620|ref|YP_619600.1| EpsIIN, glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423701|emb|CAI98675.1| EpsIIN, Glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 154

 Score = 44.4 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 35/161 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A    +   + + +          +S    T      +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRAKAQGDYLIVALST-----DEFNWNSKHKKTYFSYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE--WLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E    +   +     + T + G  ++      G  
Sbjct: 59  LLEAIRYVDLVI------------PENDWDQKRSDMHEYHIDTFVMGDDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L    ++ G + V++      ++  +SSS I+  L   +
Sbjct: 101 DFL----KEEGVNVVYLP-----RTPEISSSKIKHDLYDAN 132


>gi|291546347|emb|CBL19455.1| cytidyltransferase-related domain [Ruminococcus sp. SR1/5]
          Length = 433

 Score = 44.0 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 32/152 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H GH+ IL++A ++ +   + V S      +       +        + +
Sbjct: 4   VITYGTFDLFHQGHYNILKRARELGDYLVVGVTS-----ESYDIERGKLNVQDSLLKRIE 58

Query: 81  ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            + K GF   +I  ++          Q  +   +    +  ++ G+ +R      G    
Sbjct: 59  NVRKTGFADEIIVEEY----------QGQKLNDITKYNIDLLVVGSDWR------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
           L+   E           +   +++ +SS+ +R
Sbjct: 103 LKNYCEV----------VYLERTKNISSTKLR 124


>gi|167745495|ref|ZP_02417622.1| hypothetical protein ANACAC_00186 [Anaerostipes caccae DSM 14662]
 gi|167655216|gb|EDR99345.1| hypothetical protein ANACAC_00186 [Anaerostipes caccae DSM 14662]
          Length = 136

 Score = 44.0 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   I VLS +                     ++K
Sbjct: 4   VITYGTYDLLHAGHINLLRRAKELGDYL-IVVLSTD----EFNWDEKQKKCYFSYDERKK 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QKV  V+   V T + G  +       G   
Sbjct: 59  LLEAIRYVDLVI-----------PENNWEQKVSDVQEYHVDTFVMGNDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      +++ +S++ I+  L
Sbjct: 102 FLKDYC-----DVVYLP-----RTEGISTTKIKQDL 127


>gi|187931415|ref|YP_001891399.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691544|sp|B2SFS8|PANC_FRATM RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|187712324|gb|ACD30621.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 261

 Score = 44.0 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGMLTVILKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 QPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|317178076|dbj|BAJ55865.1| hypothetical protein HPF16_1268 [Helicobacter pylori F16]
          Length = 174

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GIDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IRT+L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRTSL 172


>gi|89256063|ref|YP_513425.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           holarctica LVS]
 gi|156502075|ref|YP_001428140.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009873|ref|ZP_02274804.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368887|ref|ZP_04984900.1| hypothetical protein FTAG_00705 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954223|ref|ZP_06558844.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312343|ref|ZP_06803128.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500972|sp|Q2A4C7|PANC_FRATH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|158706112|sp|Q0BMQ6|PANC_FRATO RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|166216327|sp|A7NB31|PANC_FRATF RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|89143894|emb|CAJ79112.1| Pantoate-beta-alanine ligase [Francisella tularensis subsp.
           holarctica LVS]
 gi|156252678|gb|ABU61184.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121808|gb|EDO65978.1| hypothetical protein FTAG_00705 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 261

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGTLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 QPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|54309845|ref|YP_130865.1| putative glycerol-3-phosphatecytidyltransferase [Photobacterium
           profundum SS9]
 gi|46914283|emb|CAG21063.1| putative glycerol-3-phosphatecytidyltransferase [Photobacterium
           profundum SS9]
          Length = 139

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD  H+GH  +L++   + +   + V +          +            + +
Sbjct: 12  IITYGTFDLFHVGHVRLLKRLKSLGDKLIVGVSTDE------FNARKGKVAFYNYHDRAE 65

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           I+        +I             E + QKV  ++   V     G  +       G   
Sbjct: 66  IVSSCQYVDKVI-----------PEEGWEQKVSDIKEYGVSVFAIGDDW------EGKFD 108

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+               +   +++ +SSS I++ L
Sbjct: 109 ELKDCCNV----------VYLKRTENISSSLIKSTL 134


>gi|91201005|emb|CAJ74062.1| strongly similar to ADP-heptose synthase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 507

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 24/165 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H+GH   +E          + V+  N    +I +   P   +     + K
Sbjct: 361 VFTNGCFDILHVGH---IEYLKFARKQGDLLVVGLNTD-SSIKKLKGPNRPIVSQDERAK 416

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +L  +         F       +    I       L+ + ++ G  ++     AG  G  
Sbjct: 417 MLAALE-DVSYVVLFDE----LTPMSIITS-----LKPEILVKGEDWKD----AGVVG-- 460

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI----RTALTKGHVLN 181
           Q+  E YG   V    +    +  + S  I    R  L +G +  
Sbjct: 461 QEFVESYGGKVVLAPLVEGISTTNIVSRIINKHTRDELLQGVITQ 505


>gi|315304105|ref|ZP_07874503.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
 gi|313627525|gb|EFR96260.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
          Length = 300

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++ N +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTNPDVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            ++     F+ + A   AE+ ++ +  + L + ++  G++  +  D +
Sbjct: 66  IVVELPVAFSTQHATIFAEESVRIL--DALHINSLFFGSEHGYANDFS 111


>gi|148508041|gb|ABQ75839.1| probable phosphopantetheine adenylyl transferase [uncultured
           haloarchaeon]
          Length = 167

 Score = 44.0 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 38/170 (22%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFNPH-PRTIIQSSSPIFTLSPPSIQ 78
           VA+G  FD IH GH  + ++A+ I     +TV L+ +   P+T     +    + P   +
Sbjct: 6   VALGGTFDPIHDGHRALFDRALSI---GKVTVGLTSDQLAPKT----RTADRYIHPYEKR 58

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL----------EVKTVITGTKFR 128
            + L               E    S E++     +  L              ++   + R
Sbjct: 59  RRQLAN-------------ELTEIS-EKYGHAFEIRQLTKPTGIATEARFDVIVVSPETR 104

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKG 177
            G +    +  LQ   E        +  +       +SS+ I R  + + 
Sbjct: 105 SGAEEVNRQRALQGHAE---LDIEVVPHVCAEDGDPISSTRIVRGEIDQH 151


>gi|257899024|ref|ZP_05678677.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           Com15]
 gi|257836936|gb|EEV62010.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           Com15]
          Length = 136

 Score = 44.0 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 32/163 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A +  +   + + +          ++           +++
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQYGDYLIVALST-----DEFNWNAKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  ++       + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWEQKVKDIKEYHADYFVMGDDW------AGHFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L++  +    +     E        +S++ I+  L   +   
Sbjct: 102 ELEQLTDAQVIYLPRTPE--------ISTTQIKNELNSLNSDK 136


>gi|224373404|ref|YP_002607776.1| pantoate--beta-alanine ligase [Nautilia profundicola AmH]
 gi|254778231|sp|B9L5Y8|PANC_NAUPA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|223588588|gb|ACM92324.1| pantoate--beta-alanine ligase [Nautilia profundicola AmH]
          Length = 272

 Score = 44.0 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 50/223 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + ++ +   +    L G    V  +G    +H GH  ++E+A K  +     ++S   
Sbjct: 1   MKILNSPKEAINYTKSLNGSIGFVPTMG---ALHEGHLSLIEKARKEND---YVIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P   +                +I ++ G  A+    FT    N  +     +VL++  +
Sbjct: 55  NPTQFLPGEDLDKYPRRLEADFEICKRAGVDAV----FTPTPENMYSND---EVLIKAPK 107

Query: 118 VK-TVITGTK-----------------------FRFGKDRAGDRGILQKRGEKYGFHTVF 153
           +K  ++ G                           FGK  A    ++++    + F    
Sbjct: 108 IKGYILEGFNRPGHFDGVLQVVNKLFNIIRPTRAYFGKKDAQQLYLIKQMVNNFFFDIEI 167

Query: 154 I--DELRNNKSQIVSSSNI--------RTALTKGHVLNAAHLL 186
           +  +  R      +SS NI        R       +  AA L 
Sbjct: 168 VECETKREKDGLALSSRNIYLSEEERKRALSISKALKRAAKLS 210


>gi|145297839|ref|YP_001140680.1| pantoate--beta-alanine ligase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|158705994|sp|A4SJ60|PANC_AERS4 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|142850611|gb|ABO88932.1| Pantoate-beta-alanine ligase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 284

 Score = 44.0 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 63/227 (27%), Gaps = 44/227 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++EQA   A      V+S   +P    ++                L
Sbjct: 29  TMGN---LHQGHLTLVEQARSHAEK---VVVSIFVNPMQFDKAEDLANYPRTLEEDCAAL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------------------ 124
              G   +    FT        +    +  VE   +  ++ G                  
Sbjct: 83  NAAGVDLV----FTPTPEIMYPQGLASQTFVEVPGLSGLLEGALRPGHFRGVSTVVTKLF 138

Query: 125 ----TK-FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSS------SNIR 171
                    FG+       +++K           V +  +R      +SS      +  R
Sbjct: 139 NLVQPDVACFGQKDYQQLALIRKMVADMAMPIEIVGVPTVRAEDGLALSSRNGYLTTAER 198

Query: 172 TA---LTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQL 215
                L +     A  + G    + S V    +     GF T  + +
Sbjct: 199 ALAPELARTMNWIAEQIEGGDHHLPSLVAQASQRLDNAGFRTDAIDI 245


>gi|289422643|ref|ZP_06424484.1| pantoate--beta-alanine ligase [Peptostreptococcus anaerobius
          653-L]
 gi|289156943|gb|EFD05567.1| pantoate--beta-alanine ligase [Peptostreptococcus anaerobius
          653-L]
          Length = 282

 Score = 44.0 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M +  NIE  ++    L+      G V  +G    +H GH  ++++A+    N+ I V+S
Sbjct: 1  MKIIKNIEEIRNTTKELRASGKSIGMVPTMGC---LHEGHKSLIDKAVA---NNDIVVVS 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
             +P                     + E  G   + 
Sbjct: 55 IFVNPTQFGPDEDYDKYPRDLKADASLCESAGVDYVF 91


>gi|255029569|ref|ZP_05301520.1| hypothetical protein LmonL_11685 [Listeria monocytogenes LO28]
          Length = 31

 Score = 44.0 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGH 34
          M V H   +  +     +  V+ IG FDG+H+GH
Sbjct: 1  MEVSH---VTLAPNKDSRAAVLTIGKFDGVHIGH 31


>gi|296270601|ref|YP_003653233.1| rfaE bifunctional protein [Thermobispora bispora DSM 43833]
 gi|296093388|gb|ADG89340.1| rfaE bifunctional protein [Thermobispora bispora DSM 43833]
          Length = 461

 Score = 44.0 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 22/152 (14%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
            E+  ++       V   G FD +H GH  +L +A  + +   I  L+ +   R +   +
Sbjct: 315 FEVADAVRAAGGRVVATGGCFDLLHAGHVSLLRRARALGDAL-IVCLNSDASVRRLKGPT 373

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+    P   + +++  +    A+    F  +    + E+     +VE L     + G 
Sbjct: 374 RPVV---PERDRVEVVSALACVDAVTV--FDED----TPER-----VVERLRPHVWVKGG 419

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157
            +      AG      +   + G   V +  L
Sbjct: 420 DY------AGRPLPEAEAVRRAGGEVVILPTL 445


>gi|159895669|gb|ABX10445.1| ethanolamine-phosphate cytidylyltransferase 1 [Gossypium hirsutum]
          Length = 384

 Score = 44.0 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 23/147 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P     P   +  ++  
Sbjct: 33  GCFDLMHYGHANALRQAKTLGDELVVGVVSDE----EIIANKGPPVL--PMEERLALVSG 86

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I        A    EQF+  +  E  ++  +I G       D +    + +K 
Sbjct: 87  LKWVDQVIA---NAPYAIT--EQFMNSLFNEH-KIDYIIHGDDPCLLPDGSDAYALAKKA 140

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI 170
           G                +++ VSS++I
Sbjct: 141 GRYKQIK----------RTEGVSSTDI 157


>gi|68642804|emb|CAI33153.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 44.0 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 62/157 (39%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
           V+  G FD +H GH  +L++A ++ +   I V+S +       ++  + +   +    + 
Sbjct: 4   VITYGTFDFLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNFEHRKN 58

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +        +I           S EQ  +K  ++   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKTDIKEYHIDTFVMGDDWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    ++ G   V++      +++ +S++ I+  L  
Sbjct: 103 L----KEEGVEVVYLP-----RTKEISTTKIKEDLAD 130


>gi|302526732|ref|ZP_07279074.1| hldE protein [Streptomyces sp. AA4]
 gi|302435627|gb|EFL07443.1| hldE protein [Streptomyces sp. AA4]
          Length = 457

 Score = 44.0 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 24/139 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH  +L QA  + +   + V S +   R +     P   L     + +
Sbjct: 326 VATGGCFDLLHPGHVSLLRQARALGDALVVCVNS-DSSVRRLKGPGRP---LLSAPDRAR 381

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +    A+    F       S    +     E L     + G  +        +  +
Sbjct: 382 LLTALSVVDAVAV--FDES----SPVAIL-----ERLRPDVWVKGGDY-------AEAEL 423

Query: 140 LQKR-GEKYGFHTVFIDEL 157
            ++   E++G   V +  L
Sbjct: 424 PERAVVERHGGEVVLVPTL 442


>gi|56708439|ref|YP_170335.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670910|ref|YP_667467.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301569|ref|YP_001121537.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224457591|ref|ZP_03666064.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371063|ref|ZP_04987065.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|81597230|sp|Q5NF57|PANC_FRATT RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|123169307|sp|Q14GL0|PANC_FRAT1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|158706014|sp|A4IWW5|PANC_FRATW RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|54113321|gb|AAV29294.1| NT02FT2057 [synthetic construct]
 gi|56604931|emb|CAG46023.1| Pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321243|emb|CAL09406.1| Pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049346|gb|ABO46417.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569303|gb|EDN34957.1| hypothetical protein FTBG_00819 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|282159631|gb|ADA79022.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 261

 Score = 44.0 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 QPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|188528126|ref|YP_001910813.1| hypothetical protein HPSH_06915 [Helicobacter pylori Shi470]
 gi|188144366|gb|ACD48783.1| hypothetical protein HPSH_06915 [Helicobacter pylori Shi470]
          Length = 171

 Score = 44.0 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++  ++ + VL                  L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPSAKLIVL------PAYQNPFKKPCFLDAQTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 69  LK--GMDRVLLSDFEIKQERAVPTIESVIHFQKLYRPKTLYLVIGADCLRHLSSWINAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|238786631|ref|ZP_04630432.1| Transcriptional regulator nadR [Yersinia frederiksenii ATCC 33641]
 gi|238724999|gb|EEQ16638.1| Transcriptional regulator nadR [Yersinia frederiksenii ATCC 33641]
          Length = 426

 Score = 44.0 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +      + +++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSHGVKKFMGEKGIV--PN 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYHEQFGIETILIDPQRSF--MNISGRQIRR 213


>gi|14590610|ref|NP_142678.1| hypothetical protein PH0735 [Pyrococcus horikoshii OT3]
 gi|74570920|sp|O58466|RIBL_PYRHO RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|3257143|dbj|BAA29826.1| 148aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 148

 Score = 44.0 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 22/161 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD IH GH   L+ A ++ +   + V     H  T+ +       ++P   + +
Sbjct: 9   VVVGGVFDIIHAGHVHFLKMAKELGDELIVIVA----HDETVKKRKGRPP-INPAEDRAE 63

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L+ +     ++             E  +   L++ L+   +  G    F      D   
Sbjct: 64  VLKAIRYVDDVVI--------GKPGEISLD--LIKRLKPDVIALGPDQDF------DCED 107

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           L+++ +  G +   I      K     +S I   +T+    
Sbjct: 108 LKRKLKSIGLNVEVIRLPYLYKKDRAKTSKIIERITEIFCD 148


>gi|293553239|ref|ZP_06673876.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1039]
 gi|291602649|gb|EFF32864.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecium
           E1039]
          Length = 136

 Score = 44.0 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 32/163 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A +  +   + + +          ++           +++
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKQYGDYLIVALST-----DEFNWNAKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  ++       + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEENWEQKVKDIKEYHADYFVMGDDW------AGHFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            L++  +    +     E        +S++ I+  L   +   
Sbjct: 102 KLEQLTDAQVIYLPRTPE--------ISTTQIKNELNSLNSDK 136


>gi|159895671|gb|ABX10446.1| ethanolamine-phosphate cytidylyltransferase 2 [Gossypium hirsutum]
          Length = 413

 Score = 44.0 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 29/150 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P   +     +  ++  
Sbjct: 62  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIIANKGPP--ILSMEERLALVSG 115

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E  N        +  ++      VI G       D + D   L
Sbjct: 116 LKWVDQVIANAPYAITEEFMN----SLFNEHKID-----YVIHGDDPCLLPDGS-DAYAL 165

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            K   +Y          +  +++ VSS++I
Sbjct: 166 AKIAGRY---------KQIKRTEGVSSTDI 186


>gi|110802951|ref|YP_698484.1| citrate lyase ligase [Clostridium perfringens SM101]
 gi|110683452|gb|ABG86822.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens SM101]
          Length = 345

 Score = 44.0 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSIQEKILEKMGFSAL 90
            GH  ++E+A K  +   + +L+               +  L    I+  ++ + G   +
Sbjct: 170 KGHKYLIEKASKENDVVHLFILT--EDKSEFSTKDRINMVKLGTKHIKNVLIHEAGKYII 227

Query: 91  IRYKFTLETAN-----YSAEQFI-----QKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
               F             A  ++      + + + L +K    G +  F          +
Sbjct: 228 SSATFPSYFIKEQKNITKAHAYLDLTLFCEYISKALNIKYRYVGEE-PFSNLTNEYNQYM 286

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           ++   K+    + +  L+ +  Q +S+SN+R+ L +G++     L
Sbjct: 287 KEILPKHNIQVIEVKRLKED-GQAISASNVRSLLKEGNIGKVESL 330


>gi|115314542|ref|YP_763265.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254367400|ref|ZP_04983426.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           holarctica 257]
 gi|115129441|gb|ABI82628.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253216|gb|EBA52310.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           holarctica 257]
          Length = 277

 Score = 44.0 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 26  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 78

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 79  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 133

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 134 GKSRPGHFSGTLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 193

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 194 QPSGLPLSSRN--KNLTSTDIEIANKIY 219


>gi|308047866|ref|YP_003911432.1| glycerol-3-phosphate cytidylyltransferase [Ferrimonas balearica DSM
           9799]
 gi|307630056|gb|ADN74358.1| Glycerol-3-phosphate cytidylyltransferase [Ferrimonas balearica DSM
           9799]
          Length = 132

 Score = 44.0 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 20/125 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD  H+GH  ILE+A  + ++  + V   +       +       +     + +
Sbjct: 3   IITFGTFDMFHVGHLNILERARSMGDSLVVGV---SSDALNFAKKGRYP--ICNQDDRMR 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           IL  +   A +   F  E+    AE       ++      ++ G  +      +G    L
Sbjct: 58  ILAAL---ACVDKVFVEESLEQKAE------YIQRYGADCLVMGDDW------SGKFDHL 102

Query: 141 QKRGE 145
               +
Sbjct: 103 NTLCQ 107


>gi|300770502|ref|ZP_07080381.1| glycerol-3-phosphate cytidylyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762978|gb|EFK59795.1| glycerol-3-phosphate cytidylyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 139

 Score = 44.0 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 25/160 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +  G FD +H GH ++LE+A     N    ++  N  P  +    +        +I E+ 
Sbjct: 5   ITFGVFDLLHAGHIMMLEEAK---RNCDYLIVGLNTDPSEVFPEKNKP----TQTIVERY 57

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           ++  G   +       E   Y++EQ +  + ++ + +   I G ++R  KD  G     +
Sbjct: 58  IQLEGCRYV------DEIVPYTSEQDLADI-IQGMPIDIRIIGEEYRD-KDFTG-----R 104

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +     G          N ++   SSS +R  + +     
Sbjct: 105 QYCVDKGIEI-----YYNKRTHRFSSSGLRKVVAEKESDK 139


>gi|118602863|ref|YP_904078.1| glycerol-3-phosphate cytidylyltransferase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567802|gb|ABL02607.1| Glycerol-3-phosphate cytidylyltransferase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 151

 Score = 44.0 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 58/162 (35%), Gaps = 35/162 (21%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   ++  G FD  H+GH  +L++   + +   + V +                 L P  
Sbjct: 1   MHKTIITYGTFDMFHIGHLKLLKKLKNMGDELIVAVST------EKFNLVKKKKILIPFE 54

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRA 134
            + +I++ +     +I             E + QK+  ++   V     G  ++      
Sbjct: 55  QRIEIVKNIKCVDRVI-----------PEEAWGQKIKDIKKYGVDVFAIGNDWK------ 97

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           G+   L    E           +  ++++ +S++ ++ +L +
Sbjct: 98  GEFNFLSNYCEV----------VYLDRTEDISTTELKKSLIE 129


>gi|147921759|ref|YP_684419.1| glycerol-3-phosphate cytidyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|121685707|sp|Q0W933|RIBL_UNCMA RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|110619815|emb|CAJ35093.1| glycerol-3-phosphate cytidyltransferase [uncultured methanogenic
           archaeon RC-I]
          Length = 140

 Score = 44.0 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 25/159 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD +H GH L L +A K  +   + V        TI     P   L P   +  
Sbjct: 5   VVATGTFDILHPGHVLYLCEARKHGDELWVIVA----RESTIKHKRKP---LIPEEQRLF 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++ +      +    T                +  ++ + +  G        +  +   
Sbjct: 58  MVQSLKCVDHAVLGSETDMF-----------EPIRQIQPEVIAIGFN------QHWNENE 100

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+K+  + G     +    ++ S   SS  IR  + +  
Sbjct: 101 LKKQLAERGIKAEIVRIQTSDHSPYASSRTIRQKIKESD 139


>gi|330465275|ref|YP_004403018.1| rfaE bifunctional protein [Verrucosispora maris AB-18-032]
 gi|328808246|gb|AEB42418.1| rfaE bifunctional protein [Verrucosispora maris AB-18-032]
          Length = 628

 Score = 44.0 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 5/88 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   LEQA  + +   +  ++ +   R +     P+   +P   
Sbjct: 439 RSVVFTNGCFDVLHRGHVRYLEQARALGD-LLVVAVNSDGSVRRLKGPDRPV---NPVED 494

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSA 104
           +  +L  +     ++ ++    TA   A
Sbjct: 495 RTALLAALSCVDHVVVFEEDSPTALIEA 522


>gi|260102810|ref|ZP_05753047.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus helveticus
           DSM 20075]
 gi|260083376|gb|EEW67496.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus helveticus
           DSM 20075]
          Length = 131

 Score = 44.0 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 7   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 61

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  ++  +V T + G+ +       G   
Sbjct: 62  ILEAIRYVDEVI-----------PEKDWDQKIDDIKKYDVDTFVMGSDW------EGKFD 104

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   +      V++      ++  +S++ I+  L
Sbjct: 105 FLKPYCK-----VVYLP-----RTPGISTTKIKEDL 130


>gi|138896893|ref|YP_001127346.1| GNAT family protein [Geobacillus thermodenitrificans NG80-2]
 gi|134268406|gb|ABO68601.1| Probable glycerol-3-GNAT family [Geobacillus thermodenitrificans
           NG80-2]
          Length = 135

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 60/159 (37%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A ++ +   + + +                +      ++ 
Sbjct: 4   IITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDE------FNKIKGKESYFSYEQRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I  +        S +Q I  V+   ++V   + G  ++      G    
Sbjct: 58  LLEAIKYVDEVIPEE--------SWDQKINDVISYKIDV--FVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+          V++      ++  +S++ I++ +   +
Sbjct: 102 LKDYC-----EVVYLP-----RTPEISTTKIKSDIQYNN 130


>gi|108563709|ref|YP_628025.1| hypothetical protein HPAG1_1284 [Helicobacter pylori HPAG1]
 gi|122980450|sp|Q1CRS1|NADD_HELPH RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|107837482|gb|ABF85351.1| nicotinate-nucleotide adenyltransferase [Helicobacter pylori HPAG1]
          Length = 174

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++     + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFVKLIVL-----P-AYQNPFKKPCFLDVQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L   G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LR--GIDRVLLSDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 172


>gi|94499399|ref|ZP_01305936.1| glycerol-3-phosphate cytidyltransferase [Oceanobacter sp. RED65]
 gi|94428153|gb|EAT13126.1| glycerol-3-phosphate cytidyltransferase [Oceanobacter sp. RED65]
          Length = 131

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 44/163 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H+GH  ILE+A    +   + V    L+F        +   P++     S
Sbjct: 5   VITFGTFDVFHVGHINILERAKSQGDYLIVGVSSDKLNFEK------KGRYPVY---SQS 55

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDR 133
            + KIL  +     +              E+ ++K    ++      ++ G  +      
Sbjct: 56  QRMKILSALSCVDEVFV------------EESLEKKPDYIQEYNANVLVMGDDW------ 97

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +G    ++          V++      ++  +S++ I   +  
Sbjct: 98  SGKFDTMKAFC-----DVVYLP-----RTPSISTTEIIEVVKN 130


>gi|22299136|ref|NP_682383.1| hypothetical protein tlr1593 [Thermosynechococcus elongatus BP-1]
 gi|22295318|dbj|BAC09145.1| tlr1593 [Thermosynechococcus elongatus BP-1]
          Length = 183

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFT 71
           P   +  V+  G FD IH GH   L  A  +     + +       R++  ++   P   
Sbjct: 31  PQDWRPLVLTNGCFDLIHAGHVRYLGAARALGKRLVVGL----NSDRSVAALKPKRP--- 83

Query: 72  LSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEW 115
           + P   + ++L  +    A++   F+  TA    E    ++ V+ 
Sbjct: 84  IIPEGQRAEVLASLRSVDAVVL--FSDRTATTLIEVLQPEIYVKG 126


>gi|254875284|ref|ZP_05247994.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254841283|gb|EET19719.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 277

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 26  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 78

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 79  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 133

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 134 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 193

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 194 QPSGLPLSSRN--KNLTSTDIEIANKIY 219


>gi|224437823|ref|ZP_03658770.1| pantoate--beta-alanine ligase [Helicobacter cinaedi CCUG 18818]
 gi|313144271|ref|ZP_07806464.1| pantothenate synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129302|gb|EFR46919.1| pantothenate synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 275

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 42/210 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V  +    +   + L+G V     +G    +H GH  ++E++++   +   T++S   
Sbjct: 1   MEVCRDRRSLREFRSRLEGSVGFVATMG---ALHKGHLSLIEKSLQENKH---TIISIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P    ++               + +K G SA+    FT    +  +   I     + + 
Sbjct: 55  NPTQFGENEDFGSYPRTLEADLALCKKAGVSAV----FTPSVEDMYSTDEITFNPPKNMG 110

Query: 118 VKTVITGTK-----------------------FRFGKDRAGDRGILQKRGEKYGFHTVFI 154
              ++ G                           FG+  A    ILQK       +   +
Sbjct: 111 --YILEGFDRPTHFAGVIAVVLKLFMLVQPYRAYFGQKDAQQVLILQKMVRDLFLNLEIV 168

Query: 155 DE--LRNNKSQIVSSSNIRTALTKGHVLNA 182
               +R++    +SS NI   L++     A
Sbjct: 169 PCEIMRDDDGLALSSRNI--YLSQKERETA 196


>gi|222823334|ref|YP_002574908.1| glycerol-3-phosphate cytidylyltransferase, [Campylobacter lari
           RM2100]
 gi|222538556|gb|ACM63657.1| glycerol-3-phosphate cytidylyltransferase, putative [Campylobacter
           lari RM2100]
          Length = 129

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 51/156 (32%), Gaps = 32/156 (20%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V+  G FD  H GH  ILE+A +  +   + V S +       +       +     + 
Sbjct: 3   TVITFGTFDLFHYGHLRILERASEFGDRLVVGV-SSDM--LNFAKKGRKP--ICSECERM 57

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           KI+  +     +   +             +++  ++  +   ++ G  ++          
Sbjct: 58  KIISALKCVDGVFLEE----------SLELKEEYIKKYQANILVMGDDWK---------- 97

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                  K+       D +   ++  +S++ I   +
Sbjct: 98  ------GKFDCFDKICDVVYLERTPSISTTEIIEMI 127


>gi|207092516|ref|ZP_03240303.1| hypothetical protein HpylHP_06340 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 169

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++   + + VL                  L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIEQTLELLPFAKLIVL------PAYQNPFKKPCFLDAKTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 69  LK--GIDRVLLSDFEIKQERAVPTIESVIFFQKLYRPKTLYLVIGADCLRHLYSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|187734911|ref|YP_001877023.1| pantoate/beta-alanine ligase [Akkermansia muciniphila ATCC
          BAA-835]
 gi|238691868|sp|B2UND0|PANC_AKKM8 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|187424963|gb|ACD04242.1| pantoate/beta-alanine ligase [Akkermansia muciniphila ATCC
          BAA-835]
          Length = 281

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%)

Query: 30 IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
          +H GH  +LEQA K+A    + V S   +P     SS        P    ++ E  G   
Sbjct: 33 LHAGHRALLEQARKLAGEDGVVVASIFVNPIQFNNSSDLQTYPRTPEKDLEVCEGAGVDY 92

Query: 90 LI 91
          + 
Sbjct: 93 VF 94


>gi|156447823|gb|ABU63690.1| Cps3B [Actinobacillus pleuropneumoniae]
          Length = 142

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 37/163 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +LE+A  + ++  +   +  FN      +              +
Sbjct: 4   VLTYGTFDLLHHGHIRLLERARSLGDHLTVASSTDQFN------LGKGKVCAY--TYEER 55

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             IL+ +     +I             EQ I    V+  E+   + G  +       G  
Sbjct: 56  AHILKAIRYVDEVIP--------ETKWEQKIDD--VKNHEIDVFVMGDDW------EGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
             L           V++      ++  +S++ ++  L K  + 
Sbjct: 100 DFLADYC-----EVVYLP-----RTPDISTTQVKKMLAKKDLA 132


>gi|56964865|ref|YP_176596.1| glycerol-3-phosphate cytidylyltransferase [Bacillus clausii
           KSM-K16]
 gi|56911108|dbj|BAD65635.1| glycerol-3-phosphate cytidylyltransferase [Bacillus clausii
           KSM-K16]
          Length = 132

 Score = 44.0 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +        +            ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKDLGDYL-IVAISSDE-----FNALKQKEAYHSFENRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + EQ ++   V+  ++   + G  +R      G    
Sbjct: 58  ILEAIRYVDEVIPEN--------TWEQKVED--VQKYDIDVFVMGDDWR------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L++         V++      ++  +S++ I+T L +  
Sbjct: 102 LKEYC-----EVVYLP-----RTAGISTTKIKTELLEAK 130


>gi|313632477|gb|EFR99495.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
          Length = 390

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 12/108 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++ N +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTNPDVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            ++     F+ + A   AE+ I+ +  + L + ++  G++     D +
Sbjct: 66  IVVELPVAFSTQHATIFAEESIRIL--DALHINSLFFGSEHGDANDFS 111


>gi|156976528|ref|YP_001447434.1| citrate lyase ligase [Vibrio harveyi ATCC BAA-1116]
 gi|156528122|gb|ABU73207.1| hypothetical protein VIBHAR_05301 [Vibrio harveyi ATCC BAA-1116]
          Length = 262

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 23/168 (13%)

Query: 33  GHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLS-PPSIQEKILEK 84
           GH  +++ A K  +   I V+        F    + +  SS  +  ++  P  +    E 
Sbjct: 90  GHMYLIDYASKKVDKLFIFVIEEDLSFFKFKDRLQLVHDSSRHLENVTVLPGGKFICTEL 149

Query: 85  MGFSALIRYKFTLET-------ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
                     F  +        A+  A  F  + + + L +  +  G +      +  ++
Sbjct: 150 TYPDY-----FDKDAKSEVVADASMEA-WFFCEFIAKKLNISKIFLGDEPTCKVTKQYNQ 203

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            + Q+   +Y      I+ +     +++S+S +R  L +    +   L
Sbjct: 204 KM-QELLPEYNIDVDIIERIST-GGRVISASTVRKLLEERDFDSIKPL 249


>gi|300313457|ref|YP_003777549.1| ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
           [Herbaspirillum seropedicae SmR1]
 gi|300076242|gb|ADJ65641.1| ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
           protein [Herbaspirillum seropedicae SmR1]
          Length = 160

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 4/108 (3%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+ Q +    K  V+  G FD +H GH   L QA        + V + +   + + +   
Sbjct: 13  ELQQRVAQLPKPVVMTNGVFDILHRGHVTYLAQARAQGAALVVAVNT-DASVKRLGKGDD 71

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
               ++    +  +L  +  S  +   F  +TA  + +Q   ++ V+ 
Sbjct: 72  RP--INTCDDRMAVLAALE-SVALVVPFDEDTALEAVQQARPEIYVKG 116


>gi|315587226|gb|ADU41607.1| nicotinate-nucleotide adenylyltransferase [Helicobacter pylori 35A]
          Length = 174

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GIDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSTIRASL 172


>gi|169335506|ref|ZP_02862699.1| hypothetical protein ANASTE_01920 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258244|gb|EDS72210.1| hypothetical protein ANASTE_01920 [Anaerofustis stercorihominis DSM
           17244]
          Length = 281

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +S+    K      G V  +G    +H GH  ++++A++  +     V+S
Sbjct: 1   MELVHKIEEVRSIVRSWKKEGLSVGLVPTMGY---LHEGHQSLIKKAVEENDR---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++          +   K+ E+ G   +    F  E      + F   V + 
Sbjct: 55  IFVNPMQFGENEDLETYPRDLNKDSKLCEETGADLI----FNPEAEEMYEKGFCSYVDMN 110

Query: 115 WL 116
            L
Sbjct: 111 GL 112


>gi|238761915|ref|ZP_04622889.1| Transcriptional regulator nadR [Yersinia kristensenii ATCC 33638]
 gi|238700029|gb|EEP92772.1| Transcriptional regulator nadR [Yersinia kristensenii ATCC 33638]
          Length = 425

 Score = 43.6 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +      + +++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSHGVKKFMNEKGIV--PN 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYNEQFGIETILIDPQRSF--MNISGRQIRR 213


>gi|161507056|ref|YP_001577010.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus helveticus
           DPC 4571]
 gi|160348045|gb|ABX26719.1| Glycerol-3-phosphate cytidyltransferase [Lactobacillus helveticus
           DPC 4571]
 gi|323467092|gb|ADX70779.1| glycerol-3-phosphate cytidylyltransferase (gct) [Lactobacillus
           helveticus H10]
 gi|328462101|gb|EGF34268.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus helveticus
           MTCC 5463]
          Length = 128

 Score = 43.6 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 60/156 (38%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  ++  +V T + G+ +       G   
Sbjct: 59  ILEAIRYVDEVI-----------PEKDWDQKIDDIKKYDVDTFVMGSDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   +      V++      ++  +S++ I+  L
Sbjct: 102 FLKPYCK-----VVYLP-----RTPGISTTKIKEDL 127


>gi|312965648|ref|ZP_07779877.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312289622|gb|EFR17513.1| conserved hypothetical protein [Escherichia coli 2362-75]
          Length = 334

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 66/235 (28%), Gaps = 43/235 (18%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + I  
Sbjct: 8   LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVHFPQATILV 67

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 68  LTP-----ELVARYNLPAIPHNDADADI----HRHYVATLCLQILRCRPHAVFTAEDYGD 118

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G               ++      +   R    +  S + IR+ + +   + A  +    
Sbjct: 119 GFANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSF 170

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
                 +        TL              L +G   VY   F        +G+
Sbjct: 171 VRRICLLGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 214


>gi|317178372|dbj|BAJ56160.1| hypothetical protein HPF30_0063 [Helicobacter pylori F30]
          Length = 174

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++  ++ + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPSAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L++     ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LKR--IDRVLLSDFEIKQERAVPTIESVIYFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 172


>gi|306842404|ref|ZP_07475058.1| pantoate--beta-alanine ligase [Brucella sp. BO2]
 gi|306287468|gb|EFM58941.1| pantoate--beta-alanine ligase [Brucella sp. BO2]
          Length = 293

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEI--NQSLPNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE   +   P   +G  +     +G    +H GH  ++ +A    +   +TV+S
Sbjct: 1   MQIIHTIEELRHALAPARQQGKKIGFAPTMGY---LHKGHLELVRRARVEND---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     +L       L    F    ++         + V 
Sbjct: 55  IFVNPLQFGAHEDLDRYPRDLERDAGLLRSGQVDYL----FAPTVSDMYPRPMQTVMDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|116514746|ref|YP_813652.1| cytidylyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116094061|gb|ABJ59214.1| Glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 154

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 35/161 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A    +   + + +          +S    T      +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRAKAQGDYLIVALST-----DEFNWNSKHKKTYFSYEQRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVE--WLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E    +   +     + T + G  ++      G  
Sbjct: 59  LLEAIRYVDLVI------------PENDWDQKRSDMHEYHIDTFVMGNDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L    ++ G + V++      ++  +SSS I+  L   +
Sbjct: 101 DFL----KEEGVNVVYLP-----RTPEISSSKIKHDLYDAN 132


>gi|322418287|ref|YP_004197510.1| rfaE bifunctional protein [Geobacter sp. M18]
 gi|320124674|gb|ADW12234.1| rfaE bifunctional protein [Geobacter sp. M18]
          Length = 487

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 27/159 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  V   G FD +H+GH   L++A ++ +   + + + +   R  ++       L   S 
Sbjct: 352 KKVVFTNGCFDLLHVGHVKYLQKARELGDVLVVGLNTDDSVRR--LKGEGRP--LIEESE 407

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  IL  +G    ++   F  +    +  + I     E L    ++ G  +        D
Sbjct: 408 RAHILAALGCVDYVVL--FDED----TPLRLI-----EALRPAILVKGGDYSV------D 450

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           + + ++  E  G     I+ +        S+S I   + 
Sbjct: 451 QVVGRELVESMGGRVALIEFV-----DGRSTSRIIEKIL 484


>gi|195492052|ref|XP_002093825.1| GE20540 [Drosophila yakuba]
 gi|194179926|gb|EDW93537.1| GE20540 [Drosophila yakuba]
          Length = 518

 Score = 43.6 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 21/183 (11%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPR 60
             + + + P  +   VV  G FD IHLGH       +L    ++      + ++      
Sbjct: 132 GTQQDDTQPPKVYSSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMT------ 185

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
              +  +    + P   +   L +           TL+      +       V+  ++  
Sbjct: 186 ---KGKTLPDLILPVEERIARLREFLMD----IDGTLQYEIVPIDDPFGPTQVDP-DLDL 237

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGH 178
           ++   +   G  +  +    ++  E   F    ++   ++      VSSSN R  L    
Sbjct: 238 IVVSAETLRGGQKVNEIRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNTRIDLLGSR 297

Query: 179 VLN 181
              
Sbjct: 298 WRR 300


>gi|18310128|ref|NP_562062.1| citrate (pro-3S)-lyase ligase [Clostridium perfringens str. 13]
 gi|18144807|dbj|BAB80852.1| citrate (pro-3S)-lyase ligase [Clostridium perfringens str. 13]
          Length = 345

 Score = 43.6 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTLSPPSIQEKILEKMGFSALI 91
           GH  ++E+A K  +   + +L+               +  L    ++  ++ + G   + 
Sbjct: 171 GHKYLIEKASKENDVVHLFILT--EDKSEFSTKDRINMVKLGTKHLKNVLIHEAGKYIIS 228

Query: 92  RYKFTLETAN-----YSAEQFI-----QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
              F             A  ++      + + + L +K    G +  F          ++
Sbjct: 229 SATFPSYFIKEQKNITKAHAYLDLTLFCEYISKALNIKYRYVGEE-PFSNLTNEYNQYMK 287

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +   K+    + +  L+ +  Q +S+S++R+ L +G++     L
Sbjct: 288 EILPKHNIQVIEVKRLKED-GQAISASSVRSFLKEGNLEKVESL 330


>gi|260771254|ref|ZP_05880181.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio furnissii CIP 102972]
 gi|260613851|gb|EEX39043.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio furnissii CIP 102972]
 gi|315179140|gb|ADT86054.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio furnissii NCTC 11218]
          Length = 476

 Score = 43.6 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++        A  + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTERRMAVLAGLGAVDWVVP------FAEDTPQRLIAEVLPDLL-----VKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|89892957|ref|YP_516444.1| hypothetical protein DSY0211 [Desulfitobacterium hafniense Y51]
 gi|219666224|ref|YP_002456659.1| pantoate--beta-alanine ligase [Desulfitobacterium hafniense DCB-2]
 gi|122484100|sp|Q251P2|PANC_DESHY RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|254778223|sp|B8FZE0|PANC_DESHD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|89332405|dbj|BAE82000.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536484|gb|ACL18223.1| pantoate/beta-alanine ligase [Desulfitobacterium hafniense DCB-2]
          Length = 282

 Score = 43.6 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 41/195 (21%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +G    +H GH  ++E+A K        V+S   +P     +              K  
Sbjct: 29  TMGY---LHEGHLTLVEEARKS---GAFVVMSIFVNPLQFGPNEDFARYPRDLERDAKKA 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TV 121
           E  G   +    F  E       + +  V V+ L                         +
Sbjct: 83  EGAGVDLI----FNPEVEEMYPAKNLTHVEVDELGDSLCGASRPGHFRGVTTVVSKLFHI 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNI--------R 171
           +   +  FG+       I+ +  +   F    + +  +R      +SS NI         
Sbjct: 139 VQPDRAYFGQKDYQQYLIICQMVKDLNFPIEVIGVPIVREEDGLALSSRNIYLSPEQRAE 198

Query: 172 TALTKGHVLNAAHLL 186
             + +  +  A +  
Sbjct: 199 ALVLQRSLGEAENWF 213


>gi|300710925|ref|YP_003736739.1| phosphopantetheine adenylyltransferase [Halalkalicoccus jeotgali
           B3]
 gi|299124608|gb|ADJ14947.1| phosphopantetheine adenylyltransferase [Halalkalicoccus jeotgali
           B3]
          Length = 162

 Score = 43.6 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 39/163 (23%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPI--FTLSPPSI 77
           VA+G  FD +H GH  + E+A ++ +   +TV L+ +      +   +      + P   
Sbjct: 3   VALGGTFDPVHDGHRALFERAFELGD---VTVGLTSDK-----LAPETRREDRYVRPFEE 54

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL----------EVKTVITGTKF 127
           +   LE              E A   AE   ++  V  L              +I   + 
Sbjct: 55  RRADLE-------------TELAAL-AEDRGREYEVLELEEPTGIATRPRFDALIVSPET 100

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             G +R  D   L++         V +D LR     I+SS+ I
Sbjct: 101 EAGGERIND---LRRERGHDSLELVVVDHLRAEDGDIISSTRI 140


>gi|290979499|ref|XP_002672471.1| predicted protein [Naegleria gruberi]
 gi|284086048|gb|EFC39727.1| predicted protein [Naegleria gruberi]
          Length = 371

 Score = 43.6 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 73/241 (30%), Gaps = 45/241 (18%)

Query: 7   IEINQSLPNHLKGGVVAI---GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP-RTI 62
           +   ++ P+  +     I   G FD +H GH  ++ QA  +  N  + V     H    I
Sbjct: 1   MSQQENTPSSQENTTKTIWLDGCFDMMHFGHANVIRQAYNLFPNVKLLV---GVHSDEEI 57

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++   P  T+   + + + +        +I            A       +++   V   
Sbjct: 58  LRHKGP--TIMKANERYEHVRSCKWVDGVIE----------DAPYVTDLEMLKKYNVDYC 105

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI----------R 171
           + G    F ++       +++ G         +      +++ VS+++I          R
Sbjct: 106 VHGDDISFDENGEDSYKAIRQAGLMM-----IVP-----RTEGVSTTDIIGRMLKLSKYR 155

Query: 172 TALTKG-HVLNAAHLLGYRFTIESDVIHGEK-IGRTLGFPTANMQLSPDILLKEG---VY 226
             + +G        L       ++ +    +           N   +       G   VY
Sbjct: 156 ELVAQGIDPSGIEELKPQSEVDQTCISPYTRTRQHYPSVNQINQFAAKTSPPPPGAKIVY 215

Query: 227 A 227
            
Sbjct: 216 V 216


>gi|299142072|ref|ZP_07035206.1| cytidylyltransferase domain protein [Prevotella oris C735]
 gi|298576534|gb|EFI48406.1| cytidylyltransferase domain protein [Prevotella oris C735]
          Length = 438

 Score = 43.6 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 81/245 (33%), Gaps = 54/245 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---FNPHPRTIIQSSSPIFTLSPPSI 77
           V+  G +D IH GH  +LE+A  + +   + V +   F+       ++   I        
Sbjct: 4   VITYGTYDLIHKGHIRLLERAKALGDYLVVGV-TADNFD-------RARGKINVQQSLIE 55

Query: 78  QEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + + +++ G    +I  ++          +  +   ++ L++     G+ ++      G 
Sbjct: 56  RIENVKQTGLADEIIVEEY----------EGQKIDDIKRLDIDIFTVGSDWK------GH 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-------------ALTKGHVLNAA 183
              L +  +           +  +++Q +SSS +R              A+    V  A 
Sbjct: 100 FDYLNEYCKV----------VYLDRTQGISSSELRAEKCDVHLGLIGESAILNKIVREAN 149

Query: 184 HLLGYRFTIESDVIHGEKIGRTLGFPT-ANMQLSPDILLKEGVYAIRFRTQDQTSYSGVA 242
           ++ G   +        +        P+  N+    D      VY I              
Sbjct: 150 YVNGLTISGIFSRTDFKLSSDLKDIPSYDNIDALLDNC--NAVYIISSPVSHYEDIKKAL 207

Query: 243 NFGRN 247
           N GRN
Sbjct: 208 NHGRN 212


>gi|15676767|ref|NP_273912.1| pantoate--beta-alanine ligase [Neisseria meningitidis MC58]
 gi|9978476|sp|P57036|PANC_NEIMB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|7226108|gb|AAF41282.1| pantoate--beta-alanine ligase [Neisseria meningitidis MC58]
 gi|316985765|gb|EFV64709.1| pantoate--beta-alanine ligase [Neisseria meningitidis H44/76]
 gi|325133990|gb|EGC56645.1| pantoate--beta-alanine ligase [Neisseria meningitidis M13399]
 gi|325139976|gb|EGC62505.1| pantoate--beta-alanine ligase [Neisseria meningitidis CU385]
 gi|325144096|gb|EGC66403.1| pantoate--beta-alanine ligase [Neisseria meningitidis M01-240013]
          Length = 278

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 62/208 (29%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGIAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFHIVSPDIACFGKKDYQQLAVIKGFVEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERDEAPRLY 200


>gi|196249432|ref|ZP_03148130.1| glycerol-3-phosphate cytidylyltransferase [Geobacillus sp. G11MC16]
 gi|196211189|gb|EDY05950.1| glycerol-3-phosphate cytidylyltransferase [Geobacillus sp. G11MC16]
          Length = 131

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 57/160 (35%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRARELGDYLIVALSTDE------FNRQKNKTSYYTYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QK+  V+   +   + G  ++      G   
Sbjct: 58  MLEAIRYVDQVI-----------PETCWEQKIYDVQEHNIDIFVMGDDWK------GRFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+   +      +++      ++  +S++ I+  L   +
Sbjct: 101 FLKPYCQ-----VIYLP-----RTVGISTTKIKEDLMVHN 130


>gi|22299993|ref|NP_683240.1| bifunctional pantoate ligase/cytidylate kinase [Thermosynechococcus
           elongatus BP-1]
 gi|81742252|sp|Q8DG73|PANCY_THEEB RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|22296178|dbj|BAC10002.1| pantothenate synthetase / cytidylate kinase [Thermosynechococcus
           elongatus BP-1]
          Length = 513

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 44/201 (21%)

Query: 1   MHVFHNIEINQSL--------PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
           M  FH +     L        P    G V  +G    +H GH  ++ +A +  +   + V
Sbjct: 1   MGTFHRLTTTAGLQTALGTFSPATTVGFVPTMG---ALHGGHAALIRRARQECD---VVV 54

Query: 53  LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY---------- 102
           +S   +P                     + +++G   L    F    A            
Sbjct: 55  VSIFVNPLQFGPQEDLERYPRALEADTALCQQLGVDLL----FVPSVAELYPTGMKHLTV 110

Query: 103 --SAEQFIQKVLVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
                +  + +                L++  ++   +  FG+  A    I+++      
Sbjct: 111 VEPPRELTEHLCGRSRPGHFRGVATIVLKLLHLVQPDRAYFGQKDAQQLAIIRRCVADLN 170

Query: 149 FHTVFI--DELRNNKSQIVSS 167
                I    +R+     +SS
Sbjct: 171 LDVEIIGCPIVRDADGLALSS 191


>gi|149191289|ref|ZP_01869544.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio shilonii AK1]
 gi|148834887|gb|EDL51869.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio shilonii AK1]
          Length = 476

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V + +   R +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVRALKGPGRPV---NPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ E    + ++ I +VL        ++ G  ++  ++ AG + +
Sbjct: 399 VLAGLGAVDWVV--PFSEE----TPQRLISEVL-----PSLLVKGGDYK-PEEIAGGKEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTEIIEAI 471


>gi|109899516|ref|YP_662771.1| cytidyltransferase-like protein [Pseudoalteromonas atlantica T6c]
 gi|109701797|gb|ABG41717.1| Glycerol-3-phosphate cytidylyltransferase [Pseudoalteromonas
           atlantica T6c]
          Length = 132

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 20/127 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A    +   + V +         +             +
Sbjct: 2   KTVITFGTFDVFHVGHINLLQRASMHGDQLIVGVST---DKLNFSKKGRNPVY--HQDDR 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            KI+  +     +   F  E+    AE       + + +   ++ G  +       G   
Sbjct: 57  MKIINSL---RYVNLCFPEESLELKAE------YIRYYKADVLVMGNDW------EGKFD 101

Query: 139 ILQKRGE 145
            L+   E
Sbjct: 102 FLKDLCE 108


>gi|126458699|ref|YP_001054977.1| phosphopantetheine adenylyltransferase [Pyrobaculum calidifontis
           JCM 11548]
 gi|126248420|gb|ABO07511.1| cytidyltransferase-related domain [Pyrobaculum calidifontis JCM
           11548]
          Length = 153

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 18/154 (11%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF--TLSPPSIQEKIL 82
           G FD +H GH  +L  A  I     I  L+ +    +  Q     F   L+       ++
Sbjct: 12  GTFDTLHSGHIKLLATATLIGERVLIG-LTSDAFASSYKQYKVKPFSVRLANLKNLVSLI 70

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                            A            VE L                RA     L+ 
Sbjct: 71  APEKEVVYAEINDPYGPAAADPRLEAIVASVETLP---------------RALQINDLRS 115

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                    + I  +R+    ++SS+ IR  L K
Sbjct: 116 ERGLRPMEVIVISTVRDGYGHVLSSTYIRKVLEK 149


>gi|290892196|ref|ZP_06555192.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290558319|gb|EFD91837.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 390

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            +I     F  + A   AE+ ++ +  + + V T+  G        F F   +
Sbjct: 66  MVIELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTFAAKK 116


>gi|227538991|ref|ZP_03969040.1| possible glycerol-3-phosphate cytidylyltransferase
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241194|gb|EEI91209.1| possible glycerol-3-phosphate cytidylyltransferase
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 139

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 25/160 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +  G FD +H GH ++LE+A     N    ++  N  P  +    +        +I E+ 
Sbjct: 5   ITFGVFDLLHAGHIMMLEEAK---RNCDYLIVGLNTDPSEVFPEKNKP----TQTIVERY 57

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           ++  G   +       E   Y++EQ +  + ++ + +   I G ++R  KD  G     +
Sbjct: 58  IQLEGCRYV------DEIVPYTSEQDLADI-IQGMPIDIRIIGEEYRD-KDFTG-----R 104

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +     G          N ++   SSS +R  + +     
Sbjct: 105 QYCVDKGIEI-----YYNKRTHRFSSSGLRRVVAEKESDK 139


>gi|169350261|ref|ZP_02867199.1| hypothetical protein CLOSPI_01005 [Clostridium spiroforme DSM 1552]
 gi|169293044|gb|EDS75177.1| hypothetical protein CLOSPI_01005 [Clostridium spiroforme DSM 1552]
          Length = 129

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  I+++A  + +   + V S                       +  
Sbjct: 4   VITYGTFDLFHVGHLNIIKRAKALGDYLVVAVSS-----DEFNAQKGKKAYHCDQDHKLI 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +        +I  +        S +Q I  +    ++V   + G  +       G    L
Sbjct: 59  LEAIRYVDEVIFEE--------SWDQKINDIKEHDIDV--FVMGDDW------EGKFDYL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++         V++      +++ +S++ I+  L K 
Sbjct: 103 KEYC-----EVVYLP-----RTEGISTTKIKDDLHKC 129


>gi|152991914|ref|YP_001357635.1| pantoate--beta-alanine ligase [Sulfurovum sp. NBC37-1]
 gi|189036438|sp|A6Q719|PANC_SULNB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|151423775|dbj|BAF71278.1| pantoate--beta-alanine ligase [Sulfurovum sp. NBC37-1]
          Length = 274

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 50/222 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +   +   Q     L G    V  +G    +H GH  +++QA K  ++  +++     
Sbjct: 1   MIIARTVRELQEAKKELNGSIGFVPTMG---ALHQGHLSLIQQAKKENDHLIVSIFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQ-------- 109
           +P   ++               KI E  G   +    F  E      +  +         
Sbjct: 55  NPTQFLEGEDLNAYPRREEADRKICEVAGVDIV----FMPEIGQMYEKDELCIGAPAIRG 110

Query: 110 ----------------KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
                           +V+++ L + +        FGK  A    ++ +  + Y      
Sbjct: 111 YILEGEKRPGHFDGMLQVVMKLLNLSSATRAY---FGKKDAQQLSLITQMVKNYFMDVQI 167

Query: 154 IDE--LRNNKSQIVSSSNI--------RTALTKGHVLNAAHL 185
           I    +R+     +SS N+        R       +  A  +
Sbjct: 168 IPCEIIRDEYGLALSSRNVYLNEEEKHRALALSRSLKRATKM 209


>gi|152993781|ref|YP_001359502.1| nicotinate-nucleotide adenylyltransferase [Sulfurovum sp. NBC37-1]
 gi|189029579|sp|A6QCD6|NADD_SULNB RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|151425642|dbj|BAF73145.1| nicotinate-nucleotide adenylyltransferase [Sulfurovum sp. NBC37-1]
          Length = 188

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 39/173 (22%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VAI  G+FD  H GH  I+ +A++I +   + VL     P   +     +  L+ P  + 
Sbjct: 9   VAIFGGSFDPPHKGHQQIVRKAVQILDIDKLIVL-----P-AYLNPFKNVS-LANPEKRL 61

Query: 80  KILEKM--GFSALIRYKFT-LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +   ++  G   ++   +   +  +    Q ++        VK +I G+          +
Sbjct: 62  EWCYQLFDGIPKVVVDDYEIRQNKSVRTSQSVKHFN-NTYSVKYLIIGSD---------N 111

Query: 137 RGILQKRGE----KYGFHTVFI----DELRNNKSQ---------IVSSSNIRT 172
              L K  E          V +      ++    +          +SS+ IR 
Sbjct: 112 LSTLTKWHEFKWLNDHITWVIVTRKGHPVQTEGLKSWRILEIDFPISSTTIRE 164


>gi|62262335|gb|AAX78061.1| unknown protein [synthetic construct]
          Length = 312

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 52  FHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 104

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 105 NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 159

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 160 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 219

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 220 QPSGLPLSSRN--KNLTSTDIEIANKIY 245


>gi|31563011|sp|O58358|COAD_PYRHO RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
          Length = 158

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 26/162 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I  L+ +   +    +   +          +
Sbjct: 7   VVVGGTFDRLHLGHKALLRKAFEVGKIVYIG-LTSDEMVKEKPYAEKILPYERRLKDLIE 65

Query: 81  ILEKMGFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            LE   F      K      FT E  +  A    ++     L V             +RA
Sbjct: 66  FLEVNNFKGYRIIKINNAIGFTTEIRSLEAIVVSEETYKGALIV-------------NRA 112

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +   L+          + I  +++     +SSS IR  L  
Sbjct: 113 REEVGLKPL------EIIVIPIIKSKLGCKISSSLIRAGLID 148


>gi|167745506|ref|ZP_02417633.1| hypothetical protein ANACAC_00197 [Anaerostipes caccae DSM 14662]
 gi|167655227|gb|EDR99356.1| hypothetical protein ANACAC_00197 [Anaerostipes caccae DSM 14662]
          Length = 184

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G +D  H+GH  IL++A +  +   + V +       +++S      + P   +  I+
Sbjct: 50  TTGVYDMFHIGHLNILKRAKEQCDYLIVGVST-----DEVVKSYKNKTPIIPFEERIAIV 104

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +++      +            A         + L    +  G+ ++          +  
Sbjct: 105 QELKCVDEAVPQ---KNMNKMEAW--------KNLHFDALFHGSDWK-------GSDMYN 146

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           K  ++  F  V +D +    ++ VSS+ +   L K +  
Sbjct: 147 KMIDE--FAQVGVDVVFLPHTEGVSSTLLSEVLHKINCD 183


>gi|114565080|ref|YP_752594.1| cytidyltransferase-like protein [Shewanella frigidimarina NCIMB
           400]
 gi|114336373|gb|ABI73755.1| Glycerol-3-phosphate cytidylyltransferase [Shewanella frigidimarina
           NCIMB 400]
          Length = 130

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 22/126 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD  H+GH  ILE+A ++     + V   +       +       +     + +
Sbjct: 3   IITFGTFDMFHIGHLNILERAKELGGKLVVGV---SSDALNFSKKQRNP--ICDEIDRMR 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +     +    F  E+    AE       ++  +   ++ G  +       G    
Sbjct: 58  IVAALSCVDQV----FLEESLELKAE------YIQKYQADYLVMGDDW------EGRFDH 101

Query: 140 LQKRGE 145
           L    +
Sbjct: 102 LSHLCK 107


>gi|307720248|ref|YP_003891388.1| pantothenate synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978341|gb|ADN08376.1| pantothenate synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 273

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 32/194 (16%)

Query: 1   MHVFHN---IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +  N   ++ +    +   G V  +G    +H GH  +++ A +      + V+S   
Sbjct: 1   MKIISNPLVLKQHLKDIDKTAGFVPTMG---ALHEGHIALIKHAKEENE---VVVVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-- 115
           +P   +         +     +KI E  G   L  +    E  +   E  I    V    
Sbjct: 55  NPTQFLAGEDLDKYPTKDEADKKICELAGVDILF-FPNAQEIYSQD-EVKICAPNVRGYV 112

Query: 116 -----------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE-- 156
                            +++  +++ T+  FGK  A    ++    +++      +    
Sbjct: 113 LEGATRPGHFSGVLRVVMKLLNIVSPTRAYFGKKDAQQLNLISLMVKQFFMSVEIVPVDI 172

Query: 157 LRNNKSQIVSSSNI 170
           +R++    +SS N+
Sbjct: 173 VRDSDGLALSSRNV 186


>gi|260775187|ref|ZP_05884085.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608888|gb|EEX35050.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 476

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 67/163 (41%), Gaps = 22/163 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  ++  +  +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKNAQSKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F  E    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFGEE----TPQRLISEVLPDML-----VKGG 433

Query: 126 KFR-----FGKDRAGDRGILQKRGEKYGFHTV-FIDELRNNKS 162
            ++      GK+   + G ++    + G  T   ID ++  K 
Sbjct: 434 DYKPEEIAGGKEVIANGGEVKVLNFEDGCSTTEIIDAIKGGKG 476


>gi|261415373|ref|YP_003249056.1| glycerol-3-phosphate cytidylyltransferase [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371829|gb|ACX74574.1| glycerol-3-phosphate cytidylyltransferase [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327759|gb|ADL26960.1| glycerol-3-phosphate cytidylyltransferase [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 136

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 41/167 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--F---NPHPRTIIQSSSPIFTLSPP 75
           ++  G FD +H GH  +L++A  + +   + + +  F       +           L   
Sbjct: 4   IITYGTFDLLHYGHINLLKRAKALGDYLIVALSTDEFNWNEKQKKCYFSYEKRKALLEAI 63

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRA 134
                         +I             E + QK   V    + T + G  +      +
Sbjct: 64  RY---------VDLVI-----------PEENWQQKKSDVHEYHIDTFVMGDDW------S 97

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           G    L    +  G   V++      ++  +S++ I+  L      N
Sbjct: 98  GKFDFL----KDEGVDVVYLP-----RTPEISTTQIKQELKSCEQKN 135


>gi|332305643|ref|YP_004433494.1| cytidyltransferase-related domain protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172972|gb|AEE22226.1| cytidyltransferase-related domain protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 35/169 (20%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             ++  G FD +H+GH  +LE+   + +   + V +          S     +L   + +
Sbjct: 2   KTIITYGTFDLLHIGHINMLERLRALGDRLIVGVSTDE------FNSIKGKNSLYSYADR 55

Query: 79  EKILEKM-GFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGD 136
            KI+  +     +I               + QK   +E   V     G  +       G 
Sbjct: 56  AKIVGALRCVDEVI-----------PENDWQQKCTDIEKYNVDIFGIGADW------QGK 98

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
              L           V++      ++  +S+++++  L+K        +
Sbjct: 99  FDDLMPHC-----EVVYLP-----RTPSISTTDLKQNLSKIDSATIQQI 137


>gi|238794797|ref|ZP_04638399.1| Transcriptional regulator nadR [Yersinia intermedia ATCC 29909]
 gi|238725877|gb|EEQ17429.1| Transcriptional regulator nadR [Yersinia intermedia ATCC 29909]
          Length = 424

 Score = 43.2 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +      +  ++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSHGVKGFMNEKGIV--PN 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYNEQFGIETILIDPQRSF--MNISGRQIRR 213


>gi|159037375|ref|YP_001536628.1| cytidyltransferase-like protein [Salinispora arenicola CNS-205]
 gi|157916210|gb|ABV97637.1| cytidyltransferase-related domain [Salinispora arenicola CNS-205]
          Length = 502

 Score = 43.2 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 25/143 (17%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH   L+ A ++ +   +  L+ +     +     P+    P  
Sbjct: 331 GGTVVATGGCFDLLHAGHVATLQAARQLGD-CLVVCLNSDASVAELKGPDRPV---MPQG 386

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT-GTKFRFGKDRA 134
            + ++L  +    A++   F       + +  +  +  +      +   G  +  G    
Sbjct: 387 DRSRLLAALSCVDAVMI--FDES----TPQATLTWLRPD------IWVKGGDYATG---- 430

Query: 135 GDRGILQ--KRGEKYGFHTVFID 155
           G   +L   +   ++G HTV + 
Sbjct: 431 GGEPVLPEAELVRRWGGHTVVVP 453


>gi|308064113|gb|ADO06000.1| hypothetical protein HPSAT_06465 [Helicobacter pylori Sat464]
          Length = 171

 Score = 43.2 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL                  L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFAKLIVL------PAYQNPFKKPCFLDAQTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 69  LK--GMDRVLLSDFEIKQERAVPTIESVIHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|124485826|ref|YP_001030442.1| phosphopantetheine adenylyltransferase [Methanocorpusculum
           labreanum Z]
 gi|124363367|gb|ABN07175.1| cytidyltransferase-related domain [Methanocorpusculum labreanum Z]
          Length = 165

 Score = 43.2 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 33/156 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-----SF---NPHPRTIIQSSSPIFTLSPPS 76
           G FD +H+GH L+L +A   A      V+     SF     HP  +         L+   
Sbjct: 7   GTFDPLHIGHQLLLTRAFMTAGPGGHVVIGLSSDSFASRKLHP--VRSYDVRFAELT--- 61

Query: 77  IQEKILEKMGFSALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              K +E   F A    +  F    +  + +     V  E   V  +I   +   GK+  
Sbjct: 62  ---KWIESKHFEATYEIEILFDQFGSALTQDFDALVVSQETFPVGNLINAKRKEMGKN-- 116

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
               + Q            I  +     ++VSS+ I
Sbjct: 117 -MVDLYQ------------IQCVMAKDGKVVSSTRI 139


>gi|322821796|gb|EFZ28021.1| ethanolamine-phosphate cytidylyltransferase, putative [Trypanosoma
           cruzi]
          Length = 393

 Score = 43.2 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 5   HNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP-RT 61
           + +     +P    G V     G FD +H GH   L QA  + +   +       H    
Sbjct: 17  YPLYATTPVPPKKPGSVRIWVDGCFDMLHFGHANALRQAAALGDELFVGC-----HSDAE 71

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIR-YKFTLETANYSAEQFIQKVLVEWLEVK 119
           I+Q   P   +     + + L        ++  Y +    A+            + LEV 
Sbjct: 72  IMQYKGPP--IMHEEERYEALRACKWVDFVVEGYPYVTRLADM-----------DRLEVD 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKG 177
            V+ G       +        Q+  +   F  +        +++ +S+++I  R  L   
Sbjct: 119 YVVHGDDISVDLNGHNS---YQEIIDAGRFKVI-------KRTESISTTDIVGRMLLCNH 168


>gi|217963804|ref|YP_002349482.1| hypothetical protein LMHCC_0511 [Listeria monocytogenes HCC23]
 gi|254806450|sp|B8DH80|Y511_LISMH RecName: Full=UPF0348 protein LMHCC_0511
 gi|217333074|gb|ACK38868.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|307571623|emb|CAR84802.1| nucleotidyltransferase, putative [Listeria monocytogenes L99]
          Length = 390

 Score = 43.2 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            +I     F  + A   AE+ ++ +  + + V T+  G        F F   +
Sbjct: 66  MVIELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTFAAKK 116


>gi|313607740|gb|EFR83962.1| putative nucleotidyltransferase [Listeria monocytogenes FSL F2-208]
          Length = 414

 Score = 43.2 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 37  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALAAGVD 89

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            +I     F  + A   AE+ ++ +  + + V T+  G        F F   +
Sbjct: 90  MVIELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTFAAKK 140


>gi|238063821|ref|ZP_04608530.1| LOW QUALITY PROTEIN: cytidyltransferase [Micromonospora sp. ATCC
           39149]
 gi|237885632|gb|EEP74460.1| LOW QUALITY PROTEIN: cytidyltransferase [Micromonospora sp. ATCC
           39149]
          Length = 439

 Score = 43.2 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 26/143 (18%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFTLSP 74
            G VVA G  FD +H GH   LE A ++ +   + V        ++  ++ S       P
Sbjct: 273 GGTVVATGGCFDLLHAGHVATLEAARQLGDCLVVCV----NSDASVAGLKGSDRPVV--P 326

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              + ++L  +G   A++   F       + E  +       L     + G  +  G   
Sbjct: 327 QGDRSRLLAALGCVDAVLV--FDEP----TPEAALTW-----LRPDVWVKGGDYAGG--- 372

Query: 134 AGDRGILQ-KRGEKYGFHTVFID 155
            G+  + + +   ++G HTV + 
Sbjct: 373 -GEPALPEAEVLRRWGGHTVVVP 394


>gi|261350502|ref|ZP_05975919.1| cytidylyltransferase domain protein [Methanobrevibacter smithii DSM
           2374]
 gi|288861285|gb|EFC93583.1| cytidylyltransferase domain protein [Methanobrevibacter smithii DSM
           2374]
          Length = 438

 Score = 43.2 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D  H GH  +LE+A  + +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLFHYGHQRLLERAKALGDYLIVGVTADDFD-------KNRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++  ++     G+ +       G+ 
Sbjct: 57  IESVRATGLADEIIIEEY----------EGQKIDDIKRYDIDIFTVGSDW------VGEF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L++            D +   +++ VSS++IR
Sbjct: 101 DYLKEYC----------DVVYLERTEGVSSTDIR 124


>gi|283457871|ref|YP_003362471.1| phosphopantetheine adenylyltransferase [Rothia mucilaginosa DY-18]
 gi|283133886|dbj|BAI64651.1| phosphopantetheine adenylyltransferase [Rothia mucilaginosa DY-18]
          Length = 158

 Score = 43.2 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +  G+FD +H GH  I+ +A ++ +   + V             +S          + +
Sbjct: 3   ALCPGSFDPVHHGHLEIIVRAAQLFDEVIVGV-----------AHNSSKKYRFSLEERVQ 51

Query: 81  I----LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKD 132
           +    L+++G   +                 + +   E    K ++ G    T + +   
Sbjct: 52  LVRESLQELGIEGVSVEP-------IPPGVLLAEYAAER-GAKVLVKGLRSATDYSY--- 100

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                        ++      +     ++   VSS+ IR 
Sbjct: 101 -----EAPMASMNRHLAQVETVFLAGEDRYGAVSSTIIRE 135


>gi|209528152|ref|ZP_03276625.1| cytidyltransferase-related domain protein [Arthrospira maxima
           CS-328]
 gi|209491411|gb|EDZ91793.1| cytidyltransferase-related domain protein [Arthrospira maxima
           CS-328]
          Length = 166

 Score = 43.2 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 33/171 (19%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPHPRTIIQSSS 67
           P   +  V + G FD IH+GH   L QA  +  +  +      +V    PH      +  
Sbjct: 19  PEQWRPLVFSNGCFDLIHVGHIRYLTQAKSLGRSLVVGLNSDRSVRLIKPH-----SAGY 73

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P   + ++L ++    A++ +  +  TA           ++E L+    + G  
Sbjct: 74  PPRPIIPELQRAEVLSQLKPVDAVVIFPESTATA-----------IIEQLQPDIYVKGGD 122

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +            L +      ++   +  L   +    +S  I   L   
Sbjct: 123 YT--------IDTLPEAPTVQAYNGKIV--LIAVEMPTSTSGIINRILHAS 163


>gi|260771899|ref|ZP_05880817.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio metschnikovii CIP 69.14]
 gi|260613191|gb|EEX38392.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio metschnikovii CIP 69.14]
          Length = 476

 Score = 43.2 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAKARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSILVKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG   ++       G     +     N  +  S+++I  A+
Sbjct: 434 DYK-PEDIAGGEEVIAA-----GGEVKVL-----NFEEGCSTTDIIKAI 471


>gi|160892821|ref|ZP_02073610.1| hypothetical protein CLOL250_00351 [Clostridium sp. L2-50]
 gi|156865380|gb|EDO58811.1| hypothetical protein CLOL250_00351 [Clostridium sp. L2-50]
          Length = 134

 Score = 43.2 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 60/155 (38%), Gaps = 32/155 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + + +          +            +++
Sbjct: 9   VITYGTFDLLHYGHINLLRRAKEMGDYLIVALST-----DEFNWNQKKKKCYFSYEERKQ 63

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I  +        S EQ  +K  ++  +V T + G  +       G    
Sbjct: 64  LLEAIRYVDLVIPEE--------SWEQ--KKEDIKEFKVDTFVMGNDW------EGKFDF 107

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+++        V++      ++  +S++ I+  L
Sbjct: 108 LKEQC-----EVVYLP-----RTPDISTTQIKDDL 132


>gi|254713093|ref|ZP_05174904.1| pantoate--beta-alanine ligase [Brucella ceti M644/93/1]
 gi|254716554|ref|ZP_05178365.1| pantoate--beta-alanine ligase [Brucella ceti M13/05/1]
 gi|261218351|ref|ZP_05932632.1| pantothenate synthetase [Brucella ceti M13/05/1]
 gi|261320800|ref|ZP_05959997.1| pantothenate synthetase [Brucella ceti M644/93/1]
 gi|260923440|gb|EEX90008.1| pantothenate synthetase [Brucella ceti M13/05/1]
 gi|261293490|gb|EEX96986.1| pantothenate synthetase [Brucella ceti M644/93/1]
          Length = 293

 Score = 43.2 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPCDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|148643574|ref|YP_001274087.1| glycerol-3-phosphate cytidyltransferase, TagD [Methanobrevibacter
           smithii ATCC 35061]
 gi|148552591|gb|ABQ87719.1| glycerol-3-phosphate cytidyltransferase, TagD [Methanobrevibacter
           smithii ATCC 35061]
          Length = 438

 Score = 43.2 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D  H GH  +LE+A  + +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLFHYGHQRLLERAKALGDYLIVGVTADDFD-------KNRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++  ++     G+ +       G+ 
Sbjct: 57  IESVRATGLADEIIIEEY----------EGQKIDDIKRYDIDIFTVGSDW------VGEF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L++            D +   +++ VSS++IR
Sbjct: 101 DYLREYC----------DVVYLERTEGVSSTDIR 124


>gi|312881698|ref|ZP_07741475.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370588|gb|EFP98063.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 476

 Score = 43.2 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 67/169 (39%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  ++     +  V+  G FD +H GH   L  A ++ N   + V + +   + +    
Sbjct: 329 IEAVKNAQAKGEKVVMTNGCFDILHAGHVSYLNHAAELGNRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    +I   F+ E    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVI--PFSEE----TPQRLIGEVLPDLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N     S++ I  A+
Sbjct: 434 DYKV-EEIAGGKEVIAS-----GGEVKVL-----NFEDGCSTTEIINAI 471


>gi|261379044|ref|ZP_05983617.1| pantoate--beta-alanine ligase [Neisseria cinerea ATCC 14685]
 gi|269144497|gb|EEZ70915.1| pantoate--beta-alanine ligase [Neisseria cinerea ATCC 14685]
          Length = 278

 Score = 43.2 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+     V+S   +
Sbjct: 1   MQIIHTIRELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRAD---SVVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLEAEGVAVIFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFHIVSPDIACFGKKDYQQLAVIKGFVEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--QYLSAAERAEAPRLY 200


>gi|222444921|ref|ZP_03607436.1| hypothetical protein METSMIALI_00537 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434486|gb|EEE41651.1| hypothetical protein METSMIALI_00537 [Methanobrevibacter smithii
           DSM 2375]
          Length = 438

 Score = 43.2 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D  H GH  +LE+A  + +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLFHYGHQRLLERAKALGDYLIVGVTADDFD-------KNRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++  ++     G+ +       G+ 
Sbjct: 57  IESVRATGLADEIIIEEY----------EGQKIDDIKRYDIDIFTVGSDW------VGEF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L++            D +   +++ VSS++IR
Sbjct: 101 DYLREYC----------DVVYLERTEGVSSTDIR 124


>gi|198466023|ref|XP_001353863.2| GA10406 [Drosophila pseudoobscura pseudoobscura]
 gi|198150414|gb|EAL29598.2| GA10406 [Drosophila pseudoobscura pseudoobscura]
          Length = 517

 Score = 43.2 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 49/175 (28%), Gaps = 31/175 (17%)

Query: 19  GGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
             VV  G FD IHLGH       +L    ++        ++         +S +    + 
Sbjct: 143 PSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTAAMT---------KSKTLPDLIL 193

Query: 74  PPSIQEKILEKM--GFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           P   +   L +      + +                +  +            ++   +  
Sbjct: 194 PVEERIAFLREFLTDIDSTLQYEIVPIDDPFGPTQHDPDMDM----------IVVSAETL 243

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLN 181
            G  +  +    ++  E   F    ++   N+      +SSSN R  L       
Sbjct: 244 RGGQKVNEIRSGKQLRELDIFVIDIVESNVNDGIHETKISSSNTRIDLLGSRWRK 298


>gi|302813467|ref|XP_002988419.1| hypothetical protein SELMODRAFT_427075 [Selaginella moellendorffii]
 gi|300143821|gb|EFJ10509.1| hypothetical protein SELMODRAFT_427075 [Selaginella moellendorffii]
          Length = 384

 Score = 43.2 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 271 GQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILE 310
           G+   +    Y+RPE  F  +E L   + ED   A+  L+
Sbjct: 288 GEELRLVVVSYIRPEANFSLLEDLINKIHEDGHIAKAALD 327


>gi|295111070|emb|CBL27820.1| [citrate (pro-3S)-lyase] ligase [Synergistetes bacterium SGP1]
          Length = 331

 Score = 43.2 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 36/183 (19%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK------- 84
           LGH  ++E+A                 P   + +     +  P  ++ +++ +       
Sbjct: 157 LGHRRLVERAASEN-------------PWVWVLAVREDRSEFPFDVRFRLMREGTADLTN 203

Query: 85  ----MGFSALIRYK-----FTLETANYSAE-----QFIQKVLVEWLEVKTVITGTKFRFG 130
                G   +I  +     FT + +  SA+          ++   L V     GT+    
Sbjct: 204 VEVLSGGEYVISARTFPAYFTRQESLASAQGTLDAAVFCDLVAPALGVARRYVGTEPFSP 263

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                +  +L++  ++ G   V ++    N  + VS+S +R AL  G       +     
Sbjct: 264 STARYNEALLEQLPKR-GIQVVVVERASVN-GEAVSASRVRAALAAGDWDTVRAMTPDST 321

Query: 191 TIE 193
              
Sbjct: 322 YRY 324


>gi|37678766|ref|NP_933375.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio vulnificus YJ016]
 gi|37197507|dbj|BAC93346.1| ADP-heptose synthase [Vibrio vulnificus YJ016]
          Length = 489

 Score = 43.2 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+  ++     +  V+  G FD +H GH   L  A K+ +   + V + +   + +    
Sbjct: 342 IDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNT-DESVKRLKGPG 400

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL + L     + G 
Sbjct: 401 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVLPDLL-----VKGG 446

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N     S++ I  A+
Sbjct: 447 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEDGCSTTEIIDAI 484


>gi|295426533|ref|ZP_06819183.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           amylolyticus DSM 11664]
 gi|295063901|gb|EFG54859.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus
           amylolyticus DSM 11664]
          Length = 128

 Score = 43.2 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 58/156 (37%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRARELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I    +  + A            V+  ++ T + G  ++      G   
Sbjct: 59  ILEAIRYVDKVIPEKDWDQKIA-----------DVKKYDIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   +      V++      ++  +S++ I+  L
Sbjct: 102 FLKPHCK-----VVYLP-----RTPGISTTKIKEDL 127


>gi|294495780|ref|YP_003542273.1| glycerol-3-phosphate cytidylyltransferase [Methanohalophilus mahii
           DSM 5219]
 gi|327488413|sp|D5EBS7|RIBL_METMS RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|292666779|gb|ADE36628.1| Glycerol-3-phosphate cytidylyltransferase [Methanohalophilus mahii
           DSM 5219]
          Length = 142

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 25/159 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++A G FD +H GH   LEQA K  N   + V                   + P   + +
Sbjct: 4   ILATGTFDILHPGHLYYLEQARKYGNELYVLV-------ARDSTIEHKPKPIVPEKQRLE 56

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +++ +      +           S E   + +  + ++   ++ G    F      D   
Sbjct: 57  MVKALRVVDHALL---------GSEEDMFKPL--KEVQPDIIVLGHDQVF------DEKE 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+ + +K GF+T  +   + ++  + SS  I   + +  
Sbjct: 100 LEDKLQKRGFNTKVVRLGKPHQCTLCSSGRIIKRILERK 138


>gi|320157455|ref|YP_004189834.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio vulnificus MO6-24/O]
 gi|54036028|sp|Q7MNY3|HLDE_VIBVY RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|319932767|gb|ADV87631.1| ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio vulnificus MO6-24/O]
          Length = 476

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+  ++     +  V+  G FD +H GH   L  A K+ +   + V + +   + +    
Sbjct: 329 IDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVLPDLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N     S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEDGCSTTEIIDAI 471


>gi|315638559|ref|ZP_07893735.1| pantoate-beta-alanine ligase [Campylobacter upsaliensis JV21]
 gi|315481403|gb|EFU72031.1| pantoate-beta-alanine ligase [Campylobacter upsaliensis JV21]
          Length = 282

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 25/143 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLS 54
           M + ++I+  +++    K   ++IG    +      H GH  ++++A   + N  I V  
Sbjct: 1   MQIINDIKDLKNIIKKWKNQGLSIGY---VPTMGYLHEGHLSLIKKA---SKNDKIIVSI 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F   P     +              K+ E  G + L    FT        + F   V + 
Sbjct: 55  FVN-PMQFGVNEDLATYPRDLERDAKLCENEGVAVL----FTPSVEQMYPKDFSSYVDMN 109

Query: 115 WLEVKTVITGTKFRFGKDRAGDR 137
            L        T    G  R G  
Sbjct: 110 SL--------TDKLCGAKREGHF 124


>gi|312136252|ref|YP_004003589.1| cytidyltransferase-related domain protein [Methanothermus fervidus
           DSM 2088]
 gi|311223971|gb|ADP76827.1| cytidyltransferase-related domain protein [Methanothermus fervidus
           DSM 2088]
          Length = 330

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 23/151 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H+GH  +L+ A KI     I V S          S      + P +++ K L+K
Sbjct: 9   GTFDKLHIGHKRLLQTAFKIGKKILIGVTSDE------FASKKG-SDVDPYNLRVKNLKK 61

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                L +YK   E    + +++   +  E ++   ++        ++       + K  
Sbjct: 62  F----LSKYKGRYELKKLN-DRYGPTIYDEKIDA--IVV------SRETEATAHEINKIR 108

Query: 145 EKYGF---HTVFIDELRNNKSQIVSSSNIRT 172
           +  G      + ID +     + +SS+ IR 
Sbjct: 109 KIKGMKKLDIIVIDMVLAEDGKPISSTRIRK 139


>gi|260656383|pdb|3INN|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine-Ligase In
           Complex With Atp At Low Occupancy At 2.1 A Resolution
 gi|260656384|pdb|3INN|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine-Ligase In
           Complex With Atp At Low Occupancy At 2.1 A Resolution
 gi|260656385|pdb|3INN|C Chain C, Crystal Structure Of Pantoate-Beta-Alanine-Ligase In
           Complex With Atp At Low Occupancy At 2.1 A Resolution
 gi|260656386|pdb|3INN|D Chain D, Crystal Structure Of Pantoate-Beta-Alanine-Ligase In
           Complex With Atp At Low Occupancy At 2.1 A Resolution
          Length = 314

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 22  MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 75

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 76  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 131

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 132 PLGNQIEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 191

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 192 VGVETVREDDGLACSSRNV 210


>gi|254442692|ref|ZP_05056168.1| pantoate--beta-alanine ligase [Verrucomicrobiae bacterium DG1235]
 gi|198257000|gb|EDY81308.1| pantoate--beta-alanine ligase [Verrucomicrobiae bacterium DG1235]
          Length = 257

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 55/215 (25%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---------- 54
           +    ++S+  +  G V  +G   G+H GH  ++++A+   +   +TV            
Sbjct: 11  YRSWRSESVGTNTLGVVPTMG---GLHSGHLELVKRALSENDRVVVTVFLNRTQFNKQED 67

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           F+ +P                +   + LE++G  A+    F         + +  ++   
Sbjct: 68  FDKYPAVF-------------AEDLRSLEEIGVDAV----FAPSYEEMYPDDYRYRISES 110

Query: 115 WLE-------------------VKTVITGT--KFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L                    +K ++     +  FG+       +++   E +      
Sbjct: 111 KLSSELEGEHRPGHFDGVLTVVMKLLMVADATRAYFGEKDWQQLELVKGLVETFFLPVEI 170

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           +    +R      +SS N R  L++  +  AA   
Sbjct: 171 VPCPTVREVSGLAMSSRNRR--LSEAALGQAARFN 203


>gi|320103297|ref|YP_004178888.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose
           1-phosphate adenylyltransferase [Isosphaera pallida ATCC
           43644]
 gi|319750579|gb|ADV62339.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose
           1-phosphate adenylyltransferase [Isosphaera pallida ATCC
           43644]
          Length = 655

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 28/117 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           V   G FD +H+GH  +L QA  + +      NS ++V       + +   S PI     
Sbjct: 457 VFTNGCFDLLHVGHVRLLRQARALGDFLVVGLNSDLSV-------KRLKGPSRPIL---S 506

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
              + ++L  +    A++ +           E+     L+E ++   ++ G  +  G
Sbjct: 507 ERDRAEVLAALECVDAVVVF-----------EEDTPLNLIESIQPDVLVKGGDYTLG 552


>gi|84502014|ref|ZP_01000172.1| pantoate--beta-alanine ligase [Oceanicola batsensis HTCC2597]
 gi|84390009|gb|EAQ02643.1| pantoate--beta-alanine ligase [Oceanicola batsensis HTCC2597]
          Length = 295

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 59/200 (29%), Gaps = 39/200 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +       +++    +        V  +G    +H GH  ++++A    +     +++
Sbjct: 1   MLIIRTKAELRAMTQDWRRAGESIGVVPTMG---ALHAGHLSLVDRACAENDR---VIVT 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P+                   + L   G   L       + A    E F   V V 
Sbjct: 55  LFVNPKQFNNPEDLAKYPRTEDSDAEKLTPYGADILYV----PDGAQMYPEGFATTVSVT 110

Query: 115 WL--------------EVKTVIT-------GTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            +               V TV+T         +  FG+       ++ +  E     T  
Sbjct: 111 GVSEGLCGGARPGHFDGVATVVTKLFLQTDADRAYFGEKDYQQLQVVTRLAEDLDLKTEI 170

Query: 154 I--DELRNNKSQIVSSSNIR 171
           +    +R      +SS N+R
Sbjct: 171 VGCPTIREEDGLAMSSRNLR 190


>gi|157736478|ref|YP_001489161.1| pantoate--beta-alanine ligase [Arcobacter butzleri RM4018]
 gi|189036403|sp|A8ERB8|PANC_ARCB4 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|157698332|gb|ABV66492.1| pantoate--beta-alanine ligase [Arcobacter butzleri RM4018]
          Length = 272

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 41/198 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   IE  Q++  +  G V     +G    +H GH  +++QA    +   I ++S   
Sbjct: 1   MQVLKTIEELQNIRKNSLGKVGLVPTMG---ALHNGHISLIKQARNEND---IVIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P   +               +KI +    + +    F  E +        ++VLV+   
Sbjct: 55  NPTQFLPGEDLDAYPRRDEADKKICQMCKVNYV----FMPEISTM---YTKEEVLVKAPN 107

Query: 118 VKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYG--FHTV 152
              ++ G                           FGK  A    ++Q+  + +    + V
Sbjct: 108 KSYILEGKTRPGHFDGVLQVVLKLFNLTQPTNAYFGKKDAQQLTLIQQMVKNFFLPINIV 167

Query: 153 FIDELRNNKSQIVSSSNI 170
             D +R      +SS NI
Sbjct: 168 PCDIVREEDGLALSSRNI 185


>gi|16801221|ref|NP_471489.1| hypothetical protein lin2155 [Listeria innocua Clip11262]
 gi|73921085|sp|Q929W8|Y2155_LISIN RecName: Full=UPF0348 protein lin2155
 gi|16414669|emb|CAC97385.1| lin2155 [Listeria innocua Clip11262]
          Length = 391

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTKSDVVIAVMS-----GSFVQRGEPA--IIPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +I     F  + A   AE+ I+ +  + L + T+  G++    +D +     + +    
Sbjct: 66  MVIELPVSFATQHATIFAEESIRLL--DALHIDTLFFGSEHGVSEDFSTAAKTVVENEAA 123

Query: 147 YG 148
           + 
Sbjct: 124 FN 125


>gi|27364072|ref|NP_759600.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio vulnificus CMCP6]
 gi|54036042|sp|Q8DEH7|HLDE_VIBVU RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|27360190|gb|AAO09127.1| ADP-heptose synthase [Vibrio vulnificus CMCP6]
          Length = 476

 Score = 43.2 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+  ++     +  V+  G FD +H GH   L  A K+ +   + V + +   + +    
Sbjct: 329 IDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVLPDLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N     S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEDGCSTTEIIDAI 471


>gi|313617961|gb|EFR90127.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
          Length = 391

 Score = 42.8 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTKSDVVIAVMS-----GSFVQRGEPA--IIPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +I     F  + A   AE+ I+ +  + L + T+  G++    +D +     + +    
Sbjct: 66  MVIELPVSFATQHATIFAEESIRLL--DALHIDTLFFGSEHGVSEDFSTAAKTVVENEAA 123

Query: 147 YG 148
           + 
Sbjct: 124 FN 125


>gi|170017554|ref|YP_001728473.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc citreum
           KM20]
 gi|169804411|gb|ACA83029.1| Glycerol-3-phosphate cytidylyltransferase [Leuconostoc citreum
           KM20]
          Length = 137

 Score = 42.8 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 57/161 (35%), Gaps = 32/161 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           ++  G FD +H GH  +L++A ++ +   + + +  FN        S       S    +
Sbjct: 4   IITYGTFDMLHYGHINLLKRAREMGDYLVVALSTDEFN------FNSKQKKTYFSFEKRK 57

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + +        +I           + EQ +    V   ++ T++ G  +       G   
Sbjct: 58  QLLEAIRYVDLVIP--------EKTWEQKVTD--VSTYDIDTLVMGDDW------VGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            + ++ +    +     E        +S++ I+  L   ++
Sbjct: 102 FIAEKTDAEVIYLHRTPE--------ISTTRIKKDLKTDYI 134


>gi|23100363|ref|NP_693830.1| glycerol-3-phosphate cytidylyltransferase [Oceanobacillus iheyensis
           HTE831]
 gi|22778595|dbj|BAC14864.1| glycerol-3-phosphate cytidylyltransferase [Oceanobacillus iheyensis
           HTE831]
          Length = 133

 Score = 42.8 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 59/158 (37%), Gaps = 33/158 (20%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V+  G FD +H+GH  IL++A  + +   + + +          +     +      ++
Sbjct: 8   TVLTYGTFDMLHIGHINILKRAKSLGDYLIVGISTDE------FNTLKSKKSYYSYPDRK 61

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +I+E +     +I           + EQ ++   ++   V   + G+ +       G   
Sbjct: 62  RIVEAIRYVDKVIP--------ESTWEQKLED--IKKYNVDYFVMGSDW------EGKFD 105

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L    E           +  ++++ +S+S I+   ++
Sbjct: 106 YLNSYCEV----------IYLSRTEGISTSKIKDDFSQ 133


>gi|295696301|ref|YP_003589539.1| pantoate/beta-alanine ligase [Bacillus tusciae DSM 2912]
 gi|295411903|gb|ADG06395.1| pantoate/beta-alanine ligase [Bacillus tusciae DSM 2912]
          Length = 291

 Score = 42.8 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 55/199 (27%), Gaps = 41/199 (20%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++++A    +     V+S   +P                +  
Sbjct: 23  GLVPTMGF---LHDGHLSLVKRAKAAGH---AVVMSIFVNPLQFGPGEDYDRYPRDIARD 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK------------------- 119
            K+ E+ G   L    FT              + V  L  +                   
Sbjct: 77  RKLAERTGVDLL----FTPSVEEMYPRALQVTLRVGDLANRLCGLSRPGHFDGVATVVAK 132

Query: 120 --TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSS------- 168
              ++   +  FG+       I+Q   E        I    +R      +SS        
Sbjct: 133 LFHIVEPDEAFFGEKDYQQLRIIQTMVEDLNLPVKVIGCPTVREADGLAMSSRNRYLSPE 192

Query: 169 -NIRTALTKGHVLNAAHLL 186
              R A+    + +AA   
Sbjct: 193 ERRRAAVLSRALFDAARRC 211


>gi|33594468|ref|NP_882112.1| putative cytidylyltransferase [Bordetella pertussis Tohama I]
 gi|33598493|ref|NP_886136.1| putative cytidylyltransferase [Bordetella parapertussis 12822]
 gi|33603437|ref|NP_890997.1| putative cytidylyltransferase [Bordetella bronchiseptica RB50]
 gi|33564543|emb|CAE43860.1| putative cytidylyltransferase [Bordetella pertussis Tohama I]
 gi|33574622|emb|CAE39273.1| putative cytidylyltransferase [Bordetella parapertussis]
 gi|33577561|emb|CAE34826.1| putative cytidylyltransferase [Bordetella bronchiseptica RB50]
 gi|332383879|gb|AEE68726.1| putative cytidylyltransferase [Bordetella pertussis CS]
          Length = 162

 Score = 42.8 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L+QA ++     + V + +   R + + S     L+    
Sbjct: 27  RPLVFTNGVFDILHRGHVTYLDQAAQLGATLVVAVNT-DESVRRLGKGSDRP--LNQVQD 83

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  +L  +G   A+            + ++ I       L    ++ G  +        D
Sbjct: 84  RAALLAALGCVDAV------TSFHEDTPQELI-----GELRPDLIVKGGDY--------D 124

Query: 137 RGILQK--RGEKYGFHTVFID 155
              L +    + +G   V I 
Sbjct: 125 MDTLPETALVKSWGGRAVAIP 145


>gi|167044073|gb|ABZ08757.1| putative cytidylyltransferase [uncultured marine crenarchaeote
           HF4000_APKG5B22]
          Length = 154

 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 20/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH  +L +A  I++   I  L+ +      + +      ++  S +  +L+ 
Sbjct: 11  GTFDAIHSGHMALLNKAFSISSKVIIG-LTSDQ-----LATKKGKNLVNDYSKRLSLLKS 64

Query: 85  MGFSALIRYKF---TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
                +I   F   + E +    +     +      VK ++   +     ++      L+
Sbjct: 65  -----VIEKNFPNISYEISKLENDFGPAVIEGS---VKALVVSEETS---NKGLLLNDLR 113

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                     V +  +     + +S++ I+ 
Sbjct: 114 AERNLSPVKIVVVPMVLAEDGKAISTTRIKN 144


>gi|170780535|ref|YP_001708867.1| putative glycerol-3-phosphate cytidyltransferase [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169155103|emb|CAQ00202.1| putative glycerol-3-phosphate cytidyltransferase [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 165

 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 36/157 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  IL+ A    +     V+S       +++ +  I  + P + + +I   
Sbjct: 9   GAFDLFHVGHLNILKHAKSRCDFLIAGVVS-----DEMLERNKGITPVVPLAERLEI--- 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK---TVITGTKFRF-GKDRAGDR--G 138
                             S   ++ +   E L  K       G    F G D  G     
Sbjct: 61  -----------------VSHISYVDQARAETLPDKLDTWREVGFDVFFKGDDWRGTPKGE 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L+      G   V+        +   SS+ +R AL 
Sbjct: 104 RLEAEFAAVGVEVVYFP-----YTMHTSSTRLRRALD 135


>gi|68642881|emb|CAI33211.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   I V+S +                     ++ 
Sbjct: 4   VITYGTFDFLHYGHINLLKRAKQLGDYL-IVVVSSD----EFNLKEKNKVCYFNFEHRKN 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E +     +I           S EQ  +K  ++   + T + G  ++      G    
Sbjct: 59  LVEAIRYVDLVIP--------ETSWEQ--KKTDIKEYHIDTFVMGDNWK------GKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L    ++ G   V++      +++ +S++ I+  L  
Sbjct: 103 L----KEEGVEVVYLP-----RTKEISTTKIKEDLAD 130


>gi|326796839|ref|YP_004314659.1| Pantothenate synthetase [Marinomonas mediterranea MMB-1]
 gi|326547603|gb|ADZ92823.1| Pantothenate synthetase [Marinomonas mediterranea MMB-1]
          Length = 283

 Score = 42.8 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 16/130 (12%)

Query: 1   MHVFHNIEINQS------LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M  FH ++  +       L       V  +GN   +H GH  ++ +A + +    I V S
Sbjct: 1   MKTFHTVKELRDTLYQDRLKEKHIAFVPTMGN---LHEGHMDLIRRARQESE---IVVAS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++             + +LE  G   L    F  +      +    +  +E
Sbjct: 55  IFVNPMQFGKNEDLERYPRTLKDDQTLLESNGCDYL----FAPDALEMYPDGKRSQTQIE 110

Query: 115 WLEVKTVITG 124
              +  ++ G
Sbjct: 111 VTGLSDILCG 120


>gi|297181270|gb|ADI17462.1| ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
           [uncultured beta proteobacterium HF0130_04F21]
          Length = 500

 Score = 42.8 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 25/167 (14%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
           + + L    K  V   G FD +H GH  +LE+A K   +  I  ++ +   + +     P
Sbjct: 358 VIKDLRESKKKVVFTNGCFDILHSGHVYLLEEARK-HGDCLIVAVNGDKSVKRLKGKDRP 416

Query: 69  IFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              ++    + K+L  +         F       + E+     ++++L+   +I G+ +R
Sbjct: 417 ---INSLMHRIKVLRALE-----CVDFITIFDEDTPEK-----VIKFLKPDVLIKGSDYR 463

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             K+  G         +K G     +        + +S++ I   L 
Sbjct: 464 L-KEVVG-----ADIVKKNGGKVELV-----LIQENLSTTLISKKLD 499


>gi|195337711|ref|XP_002035469.1| GM13900 [Drosophila sechellia]
 gi|194128562|gb|EDW50605.1| GM13900 [Drosophila sechellia]
          Length = 518

 Score = 42.8 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 6   NIEINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPR 60
             + + + P  +   VV  G FD IHLGH       +L    ++      + ++      
Sbjct: 132 GAQQDDTQPPKVYPSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMT------ 185

Query: 61  TIIQSSSPIFTLSPPSIQEKILEK--MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
              +  +    + P   +   L +  M     ++Y+       +   Q    + +     
Sbjct: 186 ---KGKTLPDLILPVEERIARLREFLMDIDGTLQYEIVPINDPFGPTQVDPDLDL----- 237

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTK 176
             ++   +   G  +  +    +   E   F    ++   ++      VSSSN R  L  
Sbjct: 238 --IVVSAETLRGGQKVNEVRSAKNLRELEIFVIDMVESNVHDGIHETKVSSSNTRIDLLG 295

Query: 177 GHVLN 181
                
Sbjct: 296 SRWRR 300


>gi|253996286|ref|YP_003048350.1| cytidyltransferase-like domain-containing protein [Methylotenera
           mobilis JLW8]
 gi|253982965|gb|ACT47823.1| cytidyltransferase-related domain protein [Methylotenera mobilis
           JLW8]
          Length = 139

 Score = 42.8 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 27/155 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  +L  A  + +   + V +       ++   +    + P   + +I+
Sbjct: 6   TTGVFDLFHVGHVNVLRNAKSMCDRLIVGVTT-----DELVAYKNKKAVI-PYEERVEIV 59

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGILQ 141
               +  L+             +Q + K+      +   V  G  +             Q
Sbjct: 60  RACKYVDLVV-----------PQQNMDKMDAYNRYKFDMVFVGDDWY-------KTDKWQ 101

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +  + +    V +  +    +Q VSS+ I   L K
Sbjct: 102 EFDDAFTSKGVRV--VYFPYTQNVSSTLINETLLK 134


>gi|116873479|ref|YP_850260.1| hypothetical protein lwe2063 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458602|sp|A0AKE9|Y2063_LISW6 RecName: Full=UPF0348 protein lwe2063
 gi|116742357|emb|CAK21481.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 392

 Score = 42.8 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 12/101 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTKADVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            ++     F  + A   AE+ ++ +  + L V  +  G++ 
Sbjct: 66  MVVELPVSFATQHATIFAEESVRIL--DALHVDALFFGSEH 104


>gi|317176814|dbj|BAJ54603.1| pantoate--beta-alanine ligase [Helicobacter pylori F16]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 35/232 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-- 115
           +P     +        P      + E +G +A+     T E   Y  EQ ++    E+  
Sbjct: 55  NPTQFGANEDFNAYPRPLEKDLALCEGLGVNAVF-LPKTSEMYPYEIEQRLKLYAPEFLS 113

Query: 116 -------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156
                              L++  ++  T+  FGK  A    I+Q   +           
Sbjct: 114 SSLEAAVREGHFDGVVQVVLKLFHLVNPTRAYFGKKDAQQLLIIQHLVKDLLLDIEITPC 173

Query: 157 --LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
             +R++ +  +SS N+   L       A  +     +I+  +  GEK    L
Sbjct: 174 EIVRDDDNLALSSRNV--YLNATQRKQALAIPKALESIKQAIDKGEKACEKL 223


>gi|127514623|ref|YP_001095820.1| cytidyltransferase-like protein [Shewanella loihica PV-4]
 gi|126639918|gb|ABO25561.1| Glycerol-3-phosphate cytidylyltransferase [Shewanella loihica PV-4]
          Length = 130

 Score = 42.8 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 30/130 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           ++  G FD  H+GH  I+E+A ++  +  + V    L+F         S    + +    
Sbjct: 3   IITFGTFDMFHIGHLNIIERARELGEHLTVGVSSDALNF---------SKKQRYPICNER 53

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I++ +     +    F  E+    AE       +E  +   ++ G  +       G
Sbjct: 54  DRMRIVKALACVDEV----FLEESLELKAE------YIEAHQADILVMGDDW------QG 97

Query: 136 DRGILQKRGE 145
               L+   +
Sbjct: 98  KFDHLKPLCQ 107


>gi|255527380|ref|ZP_05394255.1| citrate lyase ligase [Clostridium carboxidivorans P7]
 gi|296184609|ref|ZP_06853020.1| hypothetical protein
 gi|255508914|gb|EET85279.1| citrate lyase ligase [Clostridium carboxidivorans P7]
 gi|296050391|gb|EFG89814.1| [citrate (pro-3S)-lyase] ligase [Clostridium carboxidivorans P7]
          Length = 348

 Score = 42.8 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 37/196 (18%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSAL 90
           GH  ++E+A K  +     V+ F      +++    +F   P   +  ++E+    F  +
Sbjct: 161 GHRYLVEEASKKCSE----VIVF------VVEEDKSLF---PFKDRYSMVEEGLSDFKNV 207

Query: 91  IRYK----------FTLETANYSAEQF----------IQKVLVEWLEVKTVITGTKFRFG 130
                         F         E+             +   + L +     G +    
Sbjct: 208 KVIPGSEYIISSATFPSYFIRKEDERLKSYENIDCNIFGEYFCKKLNIIKRFVGEEPYCN 267

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
                +   L+K   KYG   + I E +  +   +S+S +R  +    +    +++    
Sbjct: 268 VTNTYN-NTLKKVMPKYGVELIEI-ERKCYEGNYISASKVREFIKNNQMDQVKNIIPEVT 325

Query: 191 TIESDVIHGEKIGRTL 206
               +   G++I   +
Sbjct: 326 WKFLNSNKGKEIREKI 341


>gi|189424043|ref|YP_001951220.1| rfaE bifunctional protein [Geobacter lovleyi SZ]
 gi|226702245|sp|B3E5M9|HLDE_GEOLS RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|189420302|gb|ACD94700.1| rfaE bifunctional protein [Geobacter lovleyi SZ]
          Length = 491

 Score = 42.8 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 39/181 (21%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           EI  +     +  V   G FD +H GH   L+ A ++ +      NS  +V       R 
Sbjct: 342 EIIAAERAKGRQVVFTNGCFDLLHAGHVKYLQAARRLGDLLILGLNSDASV-------RR 394

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           +     P   L     +  ++  +     +  ++        +A           L+ + 
Sbjct: 395 LKGPKRP---LIDEDERGHLMAALDCIDYVCLFEEDTPLELITA-----------LKPQI 440

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G  +       G  G  +   E YG     I  +        S++NI   + + +  
Sbjct: 441 LVKGGDYT----PEGVVG--KDLVESYGGRVELIPFVDGK-----STTNIIEKVLERYTD 489

Query: 181 N 181
            
Sbjct: 490 E 490


>gi|217032091|ref|ZP_03437591.1| hypothetical protein HPB128_16g51 [Helicobacter pylori B128]
 gi|298735638|ref|YP_003728163.1| nicotinate-nucleotide adenylyltransferase [Helicobacter pylori B8]
 gi|216946239|gb|EEC24847.1| hypothetical protein HPB128_16g51 [Helicobacter pylori B128]
 gi|298354827|emb|CBI65699.1| nicotinate-nucleotide adenylyltransferase [Helicobacter pylori B8]
          Length = 171

 Score = 42.8 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 25/165 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAKTRFKELERA 68

Query: 82  LEKMGFSALIRYKF----TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           L+  G   ++   F            +  + QK+         ++ G           + 
Sbjct: 69  LK--GIDRVLLSDFEIKQERAVPTIESVLYFQKLYCPK--TLYLVIGADCLRHLSSWTNA 124

Query: 138 GILQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
             L KR E   F  +  +E++              +SSS IR +L
Sbjct: 125 TELLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|170761026|ref|YP_001785764.1| pantoate--beta-alanine ligase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688511|sp|B1KUY6|PANC_CLOBM RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|169408015|gb|ACA56426.1| pantoate--beta-alanine ligase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 281

 Score = 42.8 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ H I+  +S+    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVHTIKDVKSIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    V V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLDKDSSLCEKFGADLV----FNPETSEMYPNKIYSHVNVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|332995338|gb|AEF05393.1| pantothenate synthetase [Alteromonas sp. SN2]
          Length = 282

 Score = 42.8 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 45/238 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V  +I   + L    K      G V  +GN   +H GH  ++++A    +     V+S
Sbjct: 1   MKVVDDIASLRKLTTEWKFSGSTVGFVPTMGN---LHNGHLKLVKRAKAHNSR---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFT-LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P     +        +    + K++E  G  A+    F    ++        + +V
Sbjct: 55  IFVNPMQFGANEDLDAYPRTIEEDKAKLIEA-GVDAV----FLPSVSDMYPGGVEHQTVV 109

Query: 114 EWLEVKTVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGFH 150
           E  ++  ++ G                           FG+       +++         
Sbjct: 110 EVPDISDILCGASRPGHFRGVATVVSKLFNMVHPHDAFFGEKDFQQLQVIRTMVRDLSMG 169

Query: 151 TVF--IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                I   R+     +SS N    LT      AA +     ++++ +  GE+    L
Sbjct: 170 VTIHGIPTERDVSGLALSSRN--GYLTDEQRHTAATIYSEMTSLKARIEAGERNYVAL 225


>gi|284162669|ref|YP_003401292.1| cytidyltransferase [Archaeoglobus profundus DSM 5631]
 gi|327488392|sp|D2RES5|RIBL_ARCPA RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|284012666|gb|ADB58619.1| cytidyltransferase-related domain protein [Archaeoglobus profundus
           DSM 5631]
          Length = 155

 Score = 42.8 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 23/156 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD IH GH   LE+A K+ +   + V                   + P   + +
Sbjct: 4   VVATGTFDIIHPGHIRFLEEAKKLGDELIVIV-------AREKNVRHKPKPIIPEEQRVR 56

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++  +                   + F   +    L+   +  G    F      D   L
Sbjct: 57  VVSALK-------PVDKAILGDEHDIFKPIME---LKPDIIALGYDQHF------DEKKL 100

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           ++   K G +T  +      + +  SS+ I   +  
Sbjct: 101 EEELRKRGLNTRVVRIKAKEECEYCSSTKIIKRIVD 136


>gi|308183802|ref|YP_003927935.1| pantoate--beta-alanine ligase [Helicobacter pylori SJM180]
 gi|308059722|gb|ADO01618.1| pantoate--beta-alanine ligase [Helicobacter pylori SJM180]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +P     +        P      + EK+G SA+       E   Y AEQ ++    ++L
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKLGVSAVF-LPKVSEMYPYEAEQRLKLYAPKFL 112


>gi|227893028|ref|ZP_04010833.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus ultunensis
           DSM 16047]
 gi|227865141|gb|EEJ72562.1| glycerol-3-phosphate cytidyltransferase [Lactobacillus ultunensis
           DSM 16047]
          Length = 128

 Score = 42.8 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 60/156 (38%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A ++ +   + + +         +        +    ++ 
Sbjct: 4   VITYGTFDLLHYGHVRLLKRAKELGDYLIVGLST-----DEFNEFKKHKEAYNTYPERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             + + QK+  V+  ++ T + G  ++      G   
Sbjct: 59  ILEAIRYVDKVI-----------PEKDWDQKISDVKKYDIDTFVMGDDWK------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+        + +++      ++  +S++ I+  L
Sbjct: 102 FLKPYC-----NVIYLP-----RTPGISTTKIKEDL 127


>gi|254507518|ref|ZP_05119652.1| bifunctional protein HldE [Vibrio parahaemolyticus 16]
 gi|219549588|gb|EED26579.1| bifunctional protein HldE [Vibrio parahaemolyticus 16]
          Length = 476

 Score = 42.8 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  ++     +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKNAQAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F  +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFGED----TPQRLISEVLPDML-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N     S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVI-----ANGGEVKVL-----NFEDGCSTTEIIDAI 471


>gi|210134207|ref|YP_002300646.1| pantoate--beta-alanine ligase [Helicobacter pylori P12]
 gi|226700760|sp|B6JPA5|PANC_HELP2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|210132175|gb|ACJ07166.1| pantoate-beta-alanine ligase [Helicobacter pylori P12]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M V   I + +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRVLETIAVLREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + EK+G SA+  
Sbjct: 55 NPTQFGANEDFSAYPRPLEKDLALCEKLGVSAVFV 89


>gi|109946876|ref|YP_664104.1| pantoate--beta-alanine ligase [Helicobacter acinonychis str.
           Sheeba]
 gi|122973426|sp|Q17Z21|PANC_HELAH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|109714097|emb|CAJ99105.1| pantoate--beta-alanine ligase [Helicobacter acinonychis str.
           Sheeba]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +    ++K  V     +G    +H GH  ++E+++K   ++  +V     
Sbjct: 1   MQVLETISDLREYRKNVKESVGFVPTMG---ALHKGHQSLIERSLKENFHTITSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK---------------FTLETANY 102
           +P     +        P      + EK+G   +   K               +  +  ++
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKLGVDVVFVPKISEMYPYKSEQRLKLYAPKFLSH 114

Query: 103 SAEQFIQKVLVEW-----LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           S E  ++K   +      L +  ++  T+  FGK  A    I+Q   +        +   
Sbjct: 115 SLEGAMRKGHFDGVAQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHLVKDLLLDIEIVPCE 174

Query: 157 -LRNNKSQIVSSSNI 170
            +R++    +SS N+
Sbjct: 175 IVRDSDHLALSSRNV 189


>gi|14590515|ref|NP_142583.1| phosphopantetheine adenylyltransferase [Pyrococcus horikoshii OT3]
 gi|3257030|dbj|BAA29713.1| 177aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 177

 Score = 42.8 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 26/162 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I  L+ +   +    +   +          +
Sbjct: 26  VVVGGTFDRLHLGHKALLRKAFEVGKIVYIG-LTSDEMVKEKPYAEKILPYERRLKDLIE 84

Query: 81  ILEKMGFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            LE   F      K      FT E  +  A    ++     L V             +RA
Sbjct: 85  FLEVNNFKGYRIIKINNAIGFTTEIRSLEAIVVSEETYKGALIV-------------NRA 131

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +   L+          + I  +++     +SSS IR  L  
Sbjct: 132 REEVGLKPL------EIIVIPIIKSKLGCKISSSLIRAGLID 167


>gi|170726046|ref|YP_001760072.1| glycerol-3-phosphate cytidylyltransferase [Shewanella woodyi ATCC
           51908]
 gi|169811393|gb|ACA85977.1| glycerol-3-phosphate cytidylyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 133

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 54/160 (33%), Gaps = 31/160 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             ++  G FD  H GH  + ++   + +   + V +          +            +
Sbjct: 2   KTIITYGTFDLFHFGHVRLFQRLKAMGDRLIVCVSTDE------FNAKKGKVAFFNYQQR 55

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I+    +  L+  +   E       + I+K+ ++   +     G+ +       G   
Sbjct: 56  AEIIAACRYVDLVLPETNWE----QKREDIEKLDIDIFGM-----GSDW------QGKFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L  + +           +  +++  +S++ I+++L    
Sbjct: 101 DLSNQCKV----------VYLDRTGNISTTEIKSSLGANQ 130


>gi|145594308|ref|YP_001158605.1| cytidyltransferase-like protein [Salinispora tropica CNB-440]
 gi|145303645|gb|ABP54227.1| cytidyltransferase-related domain [Salinispora tropica CNB-440]
          Length = 501

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 27/144 (18%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT--IIQSSSPIFTLSP 74
            G VVA G  FD +H GH   L+ A ++ +     V+  N       +     P+    P
Sbjct: 331 GGTVVATGGCFDLLHAGHVATLQAARQLGD---CLVVCLNSDASVAALKGPDRPV---MP 384

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              + ++L  +    A++ +      A  +            L     + G  +  G   
Sbjct: 385 QGDRSRLLAALSCVDAVMVFDDPTPQAALTW-----------LRPDIWVKGGDYATG--- 430

Query: 134 AGDRGILQK--RGEKYGFHTVFID 155
            G   +L +     ++G HTV + 
Sbjct: 431 -GGESVLPEADLVRRWGGHTVVVP 453


>gi|307636688|gb|ADN79138.1| Pantoate--beta-alanine ligase [Helicobacter pylori 908]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRVLETIATLREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + EK+G SA+  
Sbjct: 55 NPTQFGANEDFSAYPRPLEKDLALCEKLGVSAVFV 89


>gi|225023559|ref|ZP_03712751.1| hypothetical protein EIKCOROL_00418 [Eikenella corrodens ATCC
           23834]
 gi|224943654|gb|EEG24863.1| hypothetical protein EIKCOROL_00418 [Eikenella corrodens ATCC
           23834]
          Length = 277

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 67/229 (29%), Gaps = 32/229 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  +       G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MKIIHTIKELRDWRREA-GSVAFVPTMGN---LHEGHLALVREAAKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKV 111
           +     Q                 L   G + L        Y    +  N        ++
Sbjct: 54  NRLQFGQGEDFDRYPRTLEQDAAKLAGEGVAVLFAPSEQELYPHVAQQYNVEPPNLQNEL 113

Query: 112 L-----VEWLEVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYGFHTVFIDEL-- 157
                   +  V TV+          +  FGK       ILQ       F    +     
Sbjct: 114 CGAFRPGHFRGVATVVAKLFNIVEPDYACFGKKDYQQLAILQGMAADLNFRVEIVPVDIG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           R      +SS N    L++     A  L      +   V +G +    L
Sbjct: 174 RAADGLALSSRN--QYLSEAERKQAPQLYRELQAVARAVENGNRDYAAL 220


>gi|325995272|gb|ADZ50677.1| Pantoate-beta-alanine ligase [Helicobacter pylori 2018]
 gi|325996876|gb|ADZ49084.1| Pantoate--beta-alanine ligase [Helicobacter pylori 2017]
          Length = 276

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRVLETIATLREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + EK+G SA+  
Sbjct: 55 NPTQFGANEDFSAYPRPLEKDLALCEKLGVSAVFV 89


>gi|312131864|ref|YP_003999204.1| pantothenate synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908410|gb|ADQ18851.1| pantothenate synthetase [Leadbetterella byssophila DSM 17132]
          Length = 275

 Score = 42.8 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 59/210 (28%), Gaps = 36/210 (17%)

Query: 1   MHVFHN-IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           M V    IE      +H  G V  +G    +H GH  ++++A K       ++     +P
Sbjct: 1   MKVLKTRIETQNYAKSHEIGLVPTMG---ALHDGHLSLIKRAKKDNEVCAASIFV---NP 54

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--- 116
                                +LEK G   +    F         E    K+    L   
Sbjct: 55  IQFNNPEDLEKYPRTLEKDLDLLEKTGCDMV----FVPSVEEMYPEPVALKMDFGPLERV 110

Query: 117 ----------EVKTVITGTKFRFGK--DRAGDRGILQK--------RGEKYGFHTVFIDE 156
                         ++    F   K          LQ+        +   +G   VF D 
Sbjct: 111 LEGAFRPGHFNGVGIVVSKLFHMIKPQRAYFGLKDLQQCAIINRMVKDLNFGIDLVFCDT 170

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           +R      +SS N R  L+      A  L 
Sbjct: 171 VRAEDGLALSSRNAR--LSTEDRAKAPFLY 198


>gi|294674443|ref|YP_003575059.1| glycerophosphoryl diester phosphodiesterase/cytidylyltransferase
           family protein [Prevotella ruminicola 23]
 gi|294474126|gb|ADE83515.1| glycerophosphoryl diester phosphodiesterase/cytidylyltransferase
           family protein [Prevotella ruminicola 23]
          Length = 436

 Score = 42.8 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPH 58
           + I ++  +       V+ +G +D IH+GH  + ++A  + ++  +       VL + P 
Sbjct: 290 NRILMDSEITKKSGKKVLTVGVYDMIHIGHVNLFKRAQALGDSLTVAVQKSEVVLKYKPQ 349

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI-RYKFT 96
            + +  +   ++ +      + ++   G   ++    F 
Sbjct: 350 AKLVYSTEERMYMVKSIRFVDDVITYEGVDEIVKVADFD 388


>gi|255323515|ref|ZP_05364646.1| nicotinate nucleotide adenylyltransferase [Campylobacter showae
           RM3277]
 gi|255299552|gb|EET78838.1| nicotinate nucleotide adenylyltransferase [Campylobacter showae
           RM3277]
          Length = 190

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 27/167 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SF-NPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+FD  HLGH  +++ A++  +   + ++ +F +P         S    L     + K  
Sbjct: 8   GSFDPPHLGHDAVVKAALEQLDADKLIIMPTFISPFKSEF----SAPPLL-----RLKWA 58

Query: 83  -EKMGFSALIRYKFTLETANYSAEQFIQKVLVEW----LEVKTVITGTKFRFGKDRAGDR 137
            E  G    +      E A       I+ V        +    +I G       D+    
Sbjct: 59  NEAWGALPKVCVS-DYEIAQNRPVPTIESVRHMRQIYAVSELYLIIGADHLASLDK---W 114

Query: 138 GILQKRGEKYGFHT-----VFIDE--LRNNKSQIVSSSNIRTALTKG 177
             +++  +   F       V + E     N +  VSSS IR  L K 
Sbjct: 115 HEIEELFKLATFVVASRGNVAVPENFKILNINAPVSSSQIRQNLDKS 161


>gi|157738331|ref|YP_001491015.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Arcobacter butzleri RM4018]
 gi|167012403|sp|A8EWM2|NADD_ARCB4 RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|157700185|gb|ABV68345.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Arcobacter butzleri RM4018]
          Length = 182

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 19/170 (11%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AI  G+FD IH+ H  I+++A++      + ++       T +      F L P  ++ 
Sbjct: 3   IAIFGGSFDPIHIAHKAIVKRALEELEIDKLIIV------PTYLNPFKSSFYLEP-KVRF 55

Query: 80  KILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV--ITGTKFRFGKDRAG 135
           ++L+K+      +    + +     S        L +  +   +  I G       D+  
Sbjct: 56  ELLKKVFEKVEKVEISDYEINQEKLSYSFNTVNYLKDLYKASKIYFILGQDNVENLDKWY 115

Query: 136 DRGILQKRGE-----KYGFHTVFIDELRN-NKSQIVSSSNIRTALTKGHV 179
               L+K  E     + G+ +  + + R  N    VSS+ +RT +   ++
Sbjct: 116 KIEELKKMVEFVIATRSGYKSDKLKDFRTLNIDIDVSSTLLRTQIDTKYI 165


>gi|77918886|ref|YP_356701.1| putative ADP-heptose synthase [Pelobacter carbinolicus DSM 2380]
 gi|119365070|sp|Q3A526|HLDE_PELCD RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|77544969|gb|ABA88531.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose
           1-phosphate adenylyltransferase [Pelobacter carbinolicus
           DSM 2380]
          Length = 490

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 6   NIEINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP--RTI 62
           ++     +       VV   G FD +H+GH   L++A ++ +   + VL  N     R +
Sbjct: 339 SLRDVLEVERRRGKTVVFTNGCFDLLHVGHVKYLQKARRLGD---LLVLGLNSDASIRRL 395

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
              S P   L     +  IL  +     ++   F  +    +  + I     + L    +
Sbjct: 396 KGPSRP---LISEQERAHILAALSCIDYVVV--FDED----TPLELI-----DTLRPDIL 441

Query: 122 ITGTKFR----FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + G  +      GKD            E YG     ID +        S++NI   +   
Sbjct: 442 VKGGDYTPETVVGKD----------LVESYGGRVELIDLV-----DGRSTTNIIERILDR 486


>gi|269967419|ref|ZP_06181479.1| protein hldE [Vibrio alginolyticus 40B]
 gi|269828007|gb|EEZ82281.1| protein hldE [Vibrio alginolyticus 40B]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|290958408|ref|YP_003489590.1| pantoate-amino acid ligase [Streptomyces scabiei 87.22]
 gi|260647934|emb|CBG71039.1| putative pantoate-amino acid ligase [Streptomyces scabiei 87.22]
          Length = 333

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 49/170 (28%), Gaps = 29/170 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A +IA  +   V++   +P                    +
Sbjct: 24  VMTMG---ALHEGHATLIRTAREIAGGTGEVVVTVFVNPLQFGAGEDLDRYPRTLDADVE 80

Query: 81  ILEKMGFSALIRYKFTLETANYSAE---------------------QFIQKVLVEWLEVK 119
           +    G   +              +                       +  V+ + L + 
Sbjct: 81  LAAAAGADVVFAPSADEVYPGGEPQVRVTAGPMGERLEGASRPGHFDGMLTVVAKLLHLT 140

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEK--YGFHTVFIDELRNNKSQIVSS 167
                    +G+  A    ++++      +G   V +  +R +    +SS
Sbjct: 141 RPDVA---LYGQKDAQQLALIRRMVRDLNFGMDVVGVPTVREDDGLALSS 187


>gi|224090479|ref|XP_002308992.1| predicted protein [Populus trichocarpa]
 gi|222854968|gb|EEE92515.1| predicted protein [Populus trichocarpa]
          Length = 395

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 71  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIVANKGPPVL--SMEERLALVSG 124

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +  N        +  ++      +I G       D      + 
Sbjct: 125 LKWVDEVIANAPYAITEKFMN----SLFNEHKID-----YIIHGDDPCLLPDGTDAYALA 175

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +K G              +      +SS I   L
Sbjct: 176 KKAGRYKQIKRTEGVSSTDIVGSQSNSSRISQFL 209


>gi|254428862|ref|ZP_05042569.1| kinase, pfkB family [Alcanivorax sp. DG881]
 gi|196195031|gb|EDX89990.1| kinase, pfkB family [Alcanivorax sp. DG881]
          Length = 477

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +      +  V   G FD IH GH   L+ A +  +   + V + +   R +     P  
Sbjct: 334 EDARAQGEKIVFTNGCFDIIHAGHVGYLDTARRQGDRLVLAV-NGDESIRRLKGPGRP-- 390

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++P   +  +L  +     ++ +         + E  +  +     +   ++ G  +  
Sbjct: 391 -INPLERRMAVLAALEAVDWVVAFDTD------TPEPLLDSI-----KPDVLVKGGDYSV 438

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                 D+ +  +  + YG     +D + +     +S++ I   + K +
Sbjct: 439 ------DQVVGHEFVKGYGGEVKVLDFIDD-----ISTTKIVERIRKDN 476


>gi|20090671|ref|NP_616746.1| glycerol-3-phosphate cytidyltransferase [Methanosarcina acetivorans
           C2A]
 gi|74551426|sp|Q8TPT5|RIBL_METAC RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|19915719|gb|AAM05226.1| glycerol-3-phosphate cytidyltransferase [Methanosarcina acetivorans
           C2A]
          Length = 151

 Score = 42.5 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS----PI 69
           P  L   V+A G FD +H GH   L QA  + +        F      II   S      
Sbjct: 9   PGDLLTRVLATGTFDILHPGHVYFLTQARALGDEL------F-----VIIARDSNVTHKP 57

Query: 70  FTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             + P   + +++  +G         T++ A   +E+ + +  ++ +    ++ G    F
Sbjct: 58  KPIVPEEQRLEMVNALG---------TVDKALLGSEKDMFE-PLKEIRPDIIVLGYDQHF 107

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
                 D  +L++   K G     +    + +  + S+  I  A+ K 
Sbjct: 108 ------DIELLEEELTKRGLPAKVVRVPLSKECPLCSTGAIIKAVLKR 149


>gi|251782945|ref|YP_002997248.1| phosphopantetheine adenylyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391575|dbj|BAH82034.1| phosphopantetheine adenylyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|322412273|gb|EFY03181.1| phosphopantetheine adenylyltransferase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
 gi|323127746|gb|ADX25043.1| phosphopantetheine adenylyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 163

 Score = 42.5 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+++A ++ ++  + +  +NP    +    +    L     ++ + E 
Sbjct: 10  GSFDPVTNGHLDIIKRASQLCDHLYVGIF-YNPIKEGLFTPQTRQLML-----KQALAEM 63

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              S ++         N  A    +++ V  L V+ +  G  F +  +       L+   
Sbjct: 64  TNVSVVMAE-------NRLAVDVAKELQVTHL-VRGLRNGADFDYEAN-------LEYFN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                    +  +  N+ Q +SSS +R  + 
Sbjct: 109 HMLAPTLETVYFISRNEWQQLSSSRVRELIH 139


>gi|116754101|ref|YP_843219.1| phosphopantetheine adenylyltransferase [Methanosaeta thermophila
           PT]
 gi|116665552|gb|ABK14579.1| cytidyltransferase-related domain [Methanosaeta thermophila PT]
          Length = 174

 Score = 42.5 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 21/165 (12%)

Query: 11  QSLPNHLKGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSS 67
           +SLP+  +   VA+G  FD IH GH  +L++A ++A  +   V+  + +   R+  Q   
Sbjct: 13  RSLPSGARMARVAVGGTFDPIHDGHLALLKKAFEVAGENGTVVIALTSDEMARS--QRKR 70

Query: 68  PIFTLSP--PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           P+        +++  + EK+G  +    K +    +   + +             ++   
Sbjct: 71  PVRDFDTRLKNLRRVLKEKLGVDSFEVEKISDVFGSAIEKDY-----------DYIVVSP 119

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           +      R      +++         V I+    + +  +SS+ I
Sbjct: 120 ETAPTACR---INEIRRENGLRPLKIVQIEYKMADDNMRISSTRI 161


>gi|324998059|ref|ZP_08119171.1| pantoate--beta-alanine ligase [Pseudonocardia sp. P1]
          Length = 297

 Score = 42.5 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 50/178 (28%), Gaps = 31/178 (17%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++       V  F   P              P     ++  + G   
Sbjct: 52  LHEGHRELIRHARRLPGTVVPVVSIFVN-PLQFGAGEDLDRYPRPLEADLEVCREEGVEL 110

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVI------TGTK-FR 128
           +    FT +  +        ++    L               V TV+       G     
Sbjct: 111 V----FTPQVEHMYPPGSDTRIAAGALGDDLEGGSRKGHFDGVLTVVAKLFHIVGPDLAM 166

Query: 129 FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           FG+       ++++      F    V +  +R +    +SS   R A        AA 
Sbjct: 167 FGEKDYQQLTLVRRMVRDLDFPLQIVGVPTVREDDGTALSS---RNAYLDPEQRRAAA 221


>gi|91772473|ref|YP_565165.1| cytidyltransferase-related protein [Methanococcoides burtonii DSM
           6242]
 gi|121686945|sp|Q12YR1|RIBL_METBU RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|91711488|gb|ABE51415.1| Cytidyltransferase-related protein [Methanococcoides burtonii DSM
           6242]
          Length = 143

 Score = 42.5 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +H GH   L QA    +   + V         I   + P   + P   + K
Sbjct: 4   VLATGTFDLLHPGHVFFLRQARSFGDELYVLVA----RDSMIKHKAQP---IVPEGQRLK 56

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++   G                 ++ F     ++ +    ++ G    F      D G L
Sbjct: 57  MISAFGVV-------DKALLGSESDIFEP---LKEINPDIIVLGHDQFF------DTGEL 100

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K   + GF    +      K ++ SS  I   + + 
Sbjct: 101 EKNLGERGFKAKVVRIDDAMKCELCSSGRIIKRVLER 137


>gi|308069473|ref|YP_003871078.1| Pantoate--beta-alanine ligase (Pantothenate synthetase)
           [Paenibacillus polymyxa E681]
 gi|305858752|gb|ADM70540.1| Pantoate--beta-alanine ligase (Pantothenate synthetase)
           [Paenibacillus polymyxa E681]
          Length = 312

 Score = 42.5 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 35/201 (17%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
             +  + SL  H  G V  +G    +H GH  ++ +A ++A+     VLS   +P     
Sbjct: 26  KTVNDSASLQQHKVGFVPTMGY---LHEGHASLMHKAREMAD---TVVLSIFVNPIQFGP 79

Query: 65  SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-------- 116
           +          +   ++  + G   +    F    A    +    K+ V  L        
Sbjct: 80  NEDLESYPRDEARDLEVARREGVDIV----FLPTVAEMYPQPTQTKIRVSALTDRLCGAS 135

Query: 117 ------EVKTVI------TGTKFRF-GKDRAGDRGILQKRGEKYGFHTVFIDE--LRNNK 161
                  V TV+       G    F G   A    +LQ+       +   +    +R   
Sbjct: 136 RPGHFDGVTTVVAKLFNMIGPDLAFFGMKDAQQVAVLQQMVTDLNMNVTIVPCPIVREVD 195

Query: 162 SQIVSSSNIRTALTKGHVLNA 182
              +SS N+   L+      A
Sbjct: 196 GLALSSRNV--YLSAKQREQA 214


>gi|262395292|ref|YP_003287146.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. Ex25]
 gi|262338886|gb|ACY52681.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. Ex25]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|256397483|ref|YP_003119047.1| pantoate/beta-alanine ligase [Catenulispora acidiphila DSM 44928]
 gi|256363709|gb|ACU77206.1| pantoate/beta-alanine ligase [Catenulispora acidiphila DSM 44928]
          Length = 288

 Score = 42.5 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 11 QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
              N  +G V+ +G    +H GH  + +QA    +   + V +   +P     +     
Sbjct: 16 DGFANGKRGVVMTMG---ALHEGHLELFKQARHDCD---LVVATIFVNPLQFGPNEDFDR 69

Query: 71 TLSPPSIQEKILEKMGFSALI 91
                   K+  + G   + 
Sbjct: 70 YPRTLDDDLKLCAEAGVDVVY 90


>gi|212637732|ref|YP_002314257.1| cytidyltransferase-like protein [Shewanella piezotolerans WP3]
 gi|212559216|gb|ACJ31670.1| Cytidyltransferase-like protein [Shewanella piezotolerans WP3]
          Length = 130

 Score = 42.5 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 30/130 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           ++  G FD  H+GH  I+E+A K+  +  + V    L+F         S    + +    
Sbjct: 3   IITFGTFDMFHIGHLNIIERAKKVGTHITVGVSSDALNF---------SKKQRYPVCNER 53

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+  +G    +    F  E+    AE       ++  +   ++ G  +       G
Sbjct: 54  DRMRIVSALGCVDEV----FLEESLELKAE------YIKVHKADCLVMGDDW------EG 97

Query: 136 DRGILQKRGE 145
               L+   +
Sbjct: 98  KFDHLKPLCD 107


>gi|23501236|ref|NP_697363.1| pantoate--beta-alanine ligase [Brucella suis 1330]
 gi|161618312|ref|YP_001592199.1| pantoate--beta-alanine ligase [Brucella canis ATCC 23365]
 gi|254703695|ref|ZP_05165523.1| pantoate--beta-alanine ligase [Brucella suis bv. 3 str. 686]
 gi|260567053|ref|ZP_05837523.1| pantothenate synthetase [Brucella suis bv. 4 str. 40]
 gi|261754336|ref|ZP_05998045.1| pantothenate synthetase [Brucella suis bv. 3 str. 686]
 gi|30173075|sp|Q8G2J0|PANC_BRUSU RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|189036408|sp|A9M8B2|PANC_BRUC2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|23347118|gb|AAN29278.1| pantoate--beta-alanine ligase [Brucella suis 1330]
 gi|161335123|gb|ABX61428.1| pantoate--beta-alanine ligase [Brucella canis ATCC 23365]
 gi|260156571|gb|EEW91651.1| pantothenate synthetase [Brucella suis bv. 4 str. 40]
 gi|261744089|gb|EEY32015.1| pantothenate synthetase [Brucella suis bv. 3 str. 686]
          Length = 293

 Score = 42.5 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|254482648|ref|ZP_05095886.1| kinase, pfkB family [marine gamma proteobacterium HTCC2148]
 gi|214037007|gb|EEB77676.1| kinase, pfkB family [marine gamma proteobacterium HTCC2148]
          Length = 478

 Score = 42.5 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 26/169 (15%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
               +H +  V   G FD IH GH   LE+A +  +   + V S +   R +     P  
Sbjct: 333 ADARSHGERVVFTNGCFDIIHAGHVTYLEEAREQGDRLIVAVNS-DDSVRRLKGKGRP-- 389

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++P   +  +L  +     ++ +         +    +     E L+   ++ G  +  
Sbjct: 390 -INPQDRRMAVLSGLEAVDWVVCFDGD------TPRHLL-----ETLQPDVLVKGGDYA- 436

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           GK++        +  E YG     +  +       +S++ I T + +  
Sbjct: 437 GKEKVVG----WEIVEAYGGEVKVLSVV-----DELSTTAIVTQIQQDK 476


>gi|91228374|ref|ZP_01262301.1| ADP-heptose synthase [Vibrio alginolyticus 12G01]
 gi|91188073|gb|EAS74378.1| ADP-heptose synthase [Vibrio alginolyticus 12G01]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|195012219|ref|XP_001983534.1| GH15947 [Drosophila grimshawi]
 gi|193897016|gb|EDV95882.1| GH15947 [Drosophila grimshawi]
          Length = 518

 Score = 42.5 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 51/186 (27%), Gaps = 31/186 (16%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTI 62
           +  +S+   +   VV  G FD IH+GH       +L    ++        ++        
Sbjct: 131 DSGKSVNQKVFPNVVLGGTFDRIHIGHKIFLTQAVLRTCKRLVVGVTTAAMT-------- 182

Query: 63  IQSSSPIFTLSPPSIQEKILEK--MGFSALI---RYKFTLETANYSAEQFIQKVLVEWLE 117
            +       + P   +   L +  +     +                +  +         
Sbjct: 183 -KGKVLPELILPVEERIAQLREFLLDIDNTLQYDIVPIDDPFGPTQHDPEMDM------- 234

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALT 175
              ++   +   G  +  +     +  +   F    ++   N+      VSSSN R  L 
Sbjct: 235 ---IVVSAETLRGGQKVNEIRAANQLCQLDIFAIDIVESNVNDGIHESKVSSSNTRIDLL 291

Query: 176 KGHVLN 181
                 
Sbjct: 292 GTRWQQ 297


>gi|14521516|ref|NP_126992.1| glycerol-3-phosphate cytidyltransferase, putative [Pyrococcus
           abyssi GE5]
 gi|74558196|sp|Q9UZ37|RIBL_PYRAB RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|5458735|emb|CAB50222.1| taqD glycerol-3-phosphate cytidyltransferase, putative [Pyrococcus
           abyssi GE5]
          Length = 148

 Score = 42.5 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 22/161 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +H+GH   L+ A ++ +   + V     H  T+ +       ++P   + +
Sbjct: 9   VVVGGVFDILHVGHIHFLKMAKELGDELIVIVA----HDETVKKRKGRPP-INPAEDRAE 63

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     ++  +             I   L++ L+   +  G    F      D   
Sbjct: 64  VLRAIRYVDDVVIGEPGE----------ISLELIKKLKPDVIALGPDQDF------DCRT 107

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           L+++    G     I      K     +S I   +T+    
Sbjct: 108 LKEKLRSIGLKVEVIRLPYLYKEDRAKTSKIIKRITEIFCD 148


>gi|229016896|ref|ZP_04173824.1| Pantothenate synthetase [Bacillus cereus AH1273]
 gi|229023102|ref|ZP_04179616.1| Pantothenate synthetase [Bacillus cereus AH1272]
 gi|228738248|gb|EEL88730.1| Pantothenate synthetase [Bacillus cereus AH1272]
 gi|228744457|gb|EEL94531.1| Pantothenate synthetase [Bacillus cereus AH1273]
          Length = 282

 Score = 42.5 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+      G V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELRTSGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+   L++     A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNV--YLSQEEREEAPHLYRSLCIAKEKIEAGERNSEII 223


>gi|254230363|ref|ZP_04923747.1| bifunctional protein HldE [Vibrio sp. Ex25]
 gi|151937101|gb|EDN55975.1| bifunctional protein HldE [Vibrio sp. Ex25]
          Length = 489

 Score = 42.5 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 342 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 400

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 401 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 446

Query: 126 KFR 128
            ++
Sbjct: 447 DYK 449


>gi|57642209|ref|YP_184687.1| glycerol-3-phosphate cytidylyltransferase [Thermococcus
           kodakarensis KOD1]
 gi|74505449|sp|Q5JHT4|RIBL_PYRKO RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|57160533|dbj|BAD86463.1| glycerol-3-phosphate cytidylyltransferase [Thermococcus
           kodakarensis KOD1]
          Length = 149

 Score = 42.5 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 24/162 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH   L+QA ++ +   + V     H  T+ +       ++P   + +
Sbjct: 10  VLVGGVFDILHVGHIHFLKQAKELGDELVVIVA----HDETV-RMQKRREPINPAEDRAE 64

Query: 81  ILEKMG-FSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +L  +     +      T           I   LV+ ++   +  G    F      +  
Sbjct: 65  LLRAIRYVDEVYIGTPGT-----------IDMELVKRIDPDVIAIGPDQFF------NCE 107

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            L++   K+G +   I      KS    +S I   + +    
Sbjct: 108 KLKEELRKHGINAEVIRIPYLYKSDRAKTSKIIQRIVETFCE 149


>gi|313668666|ref|YP_004048950.1| pantoate-beta-alanine ligase [Neisseria lactamica ST-640]
 gi|313006128|emb|CBN87589.1| putative pantoate-beta-alanine ligase [Neisseria lactamica 020-06]
          Length = 278

 Score = 42.5 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 64/210 (30%), Gaps = 34/210 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFI 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQF------IQKV 111
           +     Q                 LE  G  A+I      E      +++      +Q  
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGV-AVIFAPDEKELYPNVEQRYNVEPPHLQNE 112

Query: 112 LVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF--IDE 156
           L                     ++      FGK       +++   E   F      +D 
Sbjct: 113 LCGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDT 172

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            R      +SS N    L+      A  L 
Sbjct: 173 GRAEDGLALSSRN--QYLSAAERAEAPRLY 200


>gi|17987876|ref|NP_540510.1| pantoate--beta-alanine ligase [Brucella melitensis bv. 1 str. 16M]
 gi|148559887|ref|YP_001258367.1| pantoate--beta-alanine ligase [Brucella ovis ATCC 25840]
 gi|163842617|ref|YP_001627021.1| pantoate--beta-alanine ligase [Brucella suis ATCC 23445]
 gi|225626854|ref|ZP_03784893.1| pantoate--beta-alanine ligase [Brucella ceti str. Cudo]
 gi|225851874|ref|YP_002732107.1| pantoate--beta-alanine ligase [Brucella melitensis ATCC 23457]
 gi|254701147|ref|ZP_05162975.1| pantoate--beta-alanine ligase [Brucella suis bv. 5 str. 513]
 gi|254709490|ref|ZP_05171301.1| pantoate--beta-alanine ligase [Brucella pinnipedialis B2/94]
 gi|256030984|ref|ZP_05444598.1| pantoate--beta-alanine ligase [Brucella pinnipedialis M292/94/1]
 gi|256044054|ref|ZP_05446965.1| pantoate--beta-alanine ligase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256060474|ref|ZP_05450645.1| pantoate--beta-alanine ligase [Brucella neotomae 5K33]
 gi|256112850|ref|ZP_05453771.1| pantoate--beta-alanine ligase [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159033|ref|ZP_05456866.1| pantoate--beta-alanine ligase [Brucella ceti M490/95/1]
 gi|256254387|ref|ZP_05459923.1| pantoate--beta-alanine ligase [Brucella ceti B1/94]
 gi|256264613|ref|ZP_05467145.1| pantothenate synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256368788|ref|YP_003106294.1| pantoate--beta-alanine ligase [Brucella microti CCM 4915]
 gi|260168118|ref|ZP_05754929.1| pantoate--beta-alanine ligase [Brucella sp. F5/99]
 gi|260563415|ref|ZP_05833901.1| pantothenate synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|261221550|ref|ZP_05935831.1| pantothenate synthetase [Brucella ceti B1/94]
 gi|261317013|ref|ZP_05956210.1| pantothenate synthetase [Brucella pinnipedialis B2/94]
 gi|261324467|ref|ZP_05963664.1| pantothenate synthetase [Brucella neotomae 5K33]
 gi|261751682|ref|ZP_05995391.1| pantothenate synthetase [Brucella suis bv. 5 str. 513]
 gi|261757571|ref|ZP_06001280.1| pantothenate synthetase [Brucella sp. F5/99]
 gi|265988050|ref|ZP_06100607.1| pantothenate synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990467|ref|ZP_06103024.1| pantothenate synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994295|ref|ZP_06106852.1| pantothenate synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997513|ref|ZP_06110070.1| pantothenate synthetase [Brucella ceti M490/95/1]
 gi|24638095|sp|Q8YFC9|PANC_BRUME RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|189036409|sp|A5VNS0|PANC_BRUO2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|189036410|sp|B0CJW0|PANC_BRUSI RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|254778215|sp|C0RH45|PANC_BRUMB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|17983609|gb|AAL52774.1| pantoate-beta-alanine ligase [Brucella melitensis bv. 1 str. 16M]
 gi|148371144|gb|ABQ61123.1| pantoate--beta-alanine ligase [Brucella ovis ATCC 25840]
 gi|163673340|gb|ABY37451.1| pantoate--beta-alanine ligase [Brucella suis ATCC 23445]
 gi|225618511|gb|EEH15554.1| pantoate--beta-alanine ligase [Brucella ceti str. Cudo]
 gi|225640239|gb|ACO00153.1| pantoate--beta-alanine ligase [Brucella melitensis ATCC 23457]
 gi|255998946|gb|ACU47345.1| pantoate--beta-alanine ligase [Brucella microti CCM 4915]
 gi|260153431|gb|EEW88523.1| pantothenate synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260920134|gb|EEX86787.1| pantothenate synthetase [Brucella ceti B1/94]
 gi|261296236|gb|EEX99732.1| pantothenate synthetase [Brucella pinnipedialis B2/94]
 gi|261300447|gb|EEY03944.1| pantothenate synthetase [Brucella neotomae 5K33]
 gi|261737555|gb|EEY25551.1| pantothenate synthetase [Brucella sp. F5/99]
 gi|261741435|gb|EEY29361.1| pantothenate synthetase [Brucella suis bv. 5 str. 513]
 gi|262551981|gb|EEZ07971.1| pantothenate synthetase [Brucella ceti M490/95/1]
 gi|262765408|gb|EEZ11197.1| pantothenate synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001251|gb|EEZ13826.1| pantothenate synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094977|gb|EEZ18685.1| pantothenate synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660247|gb|EEZ30508.1| pantothenate synthetase [Brucella pinnipedialis M292/94/1]
 gi|326408371|gb|ADZ65436.1| pantoate--beta-alanine ligase [Brucella melitensis M28]
 gi|326538086|gb|ADZ86301.1| pantoate--beta-alanine ligase [Brucella melitensis M5-90]
          Length = 293

 Score = 42.5 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|328883280|emb|CCA56519.1| Pantoate--beta-alanine ligase [Streptomyces venezuelae ATCC 10712]
          Length = 364

 Score = 42.5 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A +   +    V++   +P                    +
Sbjct: 45  VMTMG---ALHEGHATLIRTARERVGDQGFVVVTVFVNPLQFGAGEDLDRYPRTLEADLE 101

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-----------EVKTVIT------ 123
           +  + G SA+              +  I    +  L            + TV+       
Sbjct: 102 VAFEAGASAVFAPSVDEVYPGGEPQVRITAGPMGGLLEGASRPGHFDGMLTVVAKLLHLT 161

Query: 124 GTKFR-FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGHVL 180
                 FG+  A    ++++      F      +  +R      +SS N    L+     
Sbjct: 162 APDLAFFGQKDAQQLALIRRMARDLNFPVEIVGVPTVREGDGLALSSRN--RYLSAAERR 219

Query: 181 NAAHLLG 187
            A  L G
Sbjct: 220 TALALSG 226


>gi|319955944|ref|YP_004167207.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Nitratifractor salsuginis DSM 16511]
 gi|319418348|gb|ADV45458.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Nitratifractor salsuginis DSM 16511]
          Length = 188

 Score = 42.5 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 47/169 (27%), Gaps = 40/169 (23%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  HLGH  I+E  I       + V+     P   +         + P  + +   +
Sbjct: 13  GSFDPPHLGHRKIIEDLIYELKIPQVIVV-----PAW-LNPFKEHSH-ASPEQRLEWCRQ 65

Query: 85  -MGFSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKF-----------RFG 130
                 ++   F  E         ++          +K ++ G+                
Sbjct: 66  VFDLPGVVVSDF--EIRQGRPVYTVETWTALKRSYPLKYLVIGSDNLPTLREWKDFETLD 123

Query: 131 KD-------RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           K+       RAG+   L                        VSS+ IR 
Sbjct: 124 KEAVWIVATRAGNTPDLSFLRRAILLPVEV----------PVSSTRIRR 162


>gi|298508756|pdb|3N8H|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine Ligase From
           Franc Tularensis
 gi|298508757|pdb|3N8H|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine Ligase From
           Franc Tularensis
 gi|326634550|pdb|3QTT|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine Ligase From
           Francisella Tularensis Complexed With Beta-Gamma Atp And
           Beta-Alanine
 gi|326634551|pdb|3QTT|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine Ligase From
           Francisella Tularensis Complexed With Beta-Gamma Atp And
           Beta-Alanine
          Length = 264

 Score = 42.5 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 65/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH+I  N  +     G V   G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 13  FHSIR-NSLIKQQKIGFVPTXG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 65

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +IL  +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 66  NPNDYQTYPNQLQQDIQILASLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 120

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 121 GKSRPGHFSGXLTVVLKLLQITKPNNLYLGEKDYQQVXLIKQLVKDFFINTKIIVCPTQR 180

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 181 QPSGLPLSSRN--KNLTSTDIEIANKIY 206


>gi|221487345|gb|EEE25577.1| phosphoethanolamine cytidylyltransferase, putative [Toxoplasma
           gondii GT1]
          Length = 1128

 Score = 42.5 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 34/158 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           G FD +H GH   L QA ++     + V     +F         ++  +  +   + + +
Sbjct: 560 GVFDLLHSGHFNALRQARQLGGKLVVGVCSDAATF---------AAKKVRPIYTETERAE 610

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+        +I             E  +  +  + L       G  +  G D       
Sbjct: 611 IVRGCKWVDEVIV--------GTPYEVSVHLL--DRLNCAFAAHGDDWVVGADGEDAYAG 660

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +  G    F           +++ +S+S I + L + 
Sbjct: 661 PRHAGRMKIFK----------RTEGISTSTIVSRLLQA 688


>gi|237829953|ref|XP_002364274.1| phosphoethanolamine cytidylyltransferase, putative [Toxoplasma
           gondii ME49]
 gi|211961938|gb|EEA97133.1| phosphoethanolamine cytidylyltransferase, putative [Toxoplasma
           gondii ME49]
 gi|221507142|gb|EEE32746.1| phosphoethanolamine cytidylyltransferase, putative [Toxoplasma
           gondii VEG]
          Length = 1128

 Score = 42.5 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 34/158 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           G FD +H GH   L QA ++     + V     +F         ++  +  +   + + +
Sbjct: 560 GVFDLLHSGHFNALRQARQLGGKLVVGVCSDAATF---------AAKKVRPIYTETERAE 610

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+        +I             E  +  +  + L       G  +  G D       
Sbjct: 611 IVRGCKWVDEVIV--------GTPYEVSVHLL--DRLNCAFAAHGDDWVVGADGEDAYAG 660

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +  G    F           +++ +S+S I + L + 
Sbjct: 661 PRHAGRMKIFK----------RTEGISTSTIVSRLLQA 688


>gi|62289322|ref|YP_221115.1| pantoate--beta-alanine ligase [Brucella abortus bv. 1 str. 9-941]
 gi|82699252|ref|YP_413826.1| pantoate--beta-alanine ligase [Brucella melitensis biovar Abortus
           2308]
 gi|189023575|ref|YP_001934343.1| pantoate--beta-alanine ligase [Brucella abortus S19]
 gi|237814813|ref|ZP_04593811.1| pantoate--beta-alanine ligase [Brucella abortus str. 2308 A]
 gi|254688641|ref|ZP_05151895.1| pantoate--beta-alanine ligase [Brucella abortus bv. 6 str. 870]
 gi|254693122|ref|ZP_05154950.1| pantoate--beta-alanine ligase [Brucella abortus bv. 3 str. Tulya]
 gi|254696764|ref|ZP_05158592.1| pantoate--beta-alanine ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254729673|ref|ZP_05188251.1| pantoate--beta-alanine ligase [Brucella abortus bv. 4 str. 292]
 gi|256256888|ref|ZP_05462424.1| pantoate--beta-alanine ligase [Brucella abortus bv. 9 str. C68]
 gi|260545923|ref|ZP_05821664.1| pantothenate synthetase [Brucella abortus NCTC 8038]
 gi|260754114|ref|ZP_05866462.1| pantoate-activating enzyme [Brucella abortus bv. 6 str. 870]
 gi|260757334|ref|ZP_05869682.1| pantoate-activating enzyme [Brucella abortus bv. 4 str. 292]
 gi|260761158|ref|ZP_05873501.1| pantoate-activating enzyme [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883139|ref|ZP_05894753.1| pantothenate synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213360|ref|ZP_05927641.1| pantoate-activating enzyme [Brucella abortus bv. 3 str. Tulya]
 gi|297247738|ref|ZP_06931456.1| pantoate-beta-alanine ligase [Brucella abortus bv. 5 str. B3196]
 gi|75497328|sp|Q57F30|PANC_BRUAB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|123546929|sp|Q2YPI2|PANC_BRUA2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|238689420|sp|B2S9H8|PANC_BRUA1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|62195454|gb|AAX73754.1| PanC, pantoate--beta-alanine ligase [Brucella abortus bv. 1 str.
           9-941]
 gi|82615353|emb|CAJ10315.1| Pantoate-beta-alanine ligase:Cytidyltransferase-related domain
           [Brucella melitensis biovar Abortus 2308]
 gi|189019147|gb|ACD71869.1| Pantoate-beta-alanine ligase [Brucella abortus S19]
 gi|237789650|gb|EEP63860.1| pantoate--beta-alanine ligase [Brucella abortus str. 2308 A]
 gi|260097330|gb|EEW81205.1| pantothenate synthetase [Brucella abortus NCTC 8038]
 gi|260667652|gb|EEX54592.1| pantoate-activating enzyme [Brucella abortus bv. 4 str. 292]
 gi|260671590|gb|EEX58411.1| pantoate-activating enzyme [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674222|gb|EEX61043.1| pantoate-activating enzyme [Brucella abortus bv. 6 str. 870]
 gi|260872667|gb|EEX79736.1| pantothenate synthetase [Brucella abortus bv. 9 str. C68]
 gi|260914967|gb|EEX81828.1| pantoate-activating enzyme [Brucella abortus bv. 3 str. Tulya]
 gi|297174907|gb|EFH34254.1| pantoate-beta-alanine ligase [Brucella abortus bv. 5 str. B3196]
          Length = 293

 Score = 42.5 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQIEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|256827031|ref|YP_003150990.1| cytidyltransferase-related enzyme [Cryptobacterium curtum DSM
           15641]
 gi|256583174|gb|ACU94308.1| cytidyltransferase-related enzyme [Cryptobacterium curtum DSM
           15641]
          Length = 464

 Score = 42.5 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 32/158 (20%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS-P 74
             K  V+  G +D +H GH  +L++A  + +   I  ++ +             F +S  
Sbjct: 3   DGKKVVITYGTYDLLHFGHIALLKRARALGDFL-IVGITSD-----AFDKQRGKFNVSQS 56

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
              + + +   G + +I      E          +   ++   V     G+ +       
Sbjct: 57  LVERIEAVRSTGLADMIVV---EEYRGQ------KIADIQKYHVDVFAIGSDW------Q 101

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           G    L+K  E           +   +++ VSS+ +R 
Sbjct: 102 GKFDYLEKYCEV----------VYLERTKGVSSTELRE 129


>gi|118497932|ref|YP_898982.1| pantoate-beta-alanine ligase [Francisella tularensis subsp.
           novicida U112]
 gi|194323154|ref|ZP_03056938.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           novicida FTE]
 gi|158706013|sp|A0Q7L3|PANC_FRATN RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|118423838|gb|ABK90228.1| pantoate-beta-alanine ligase [Francisella novicida U112]
 gi|194322518|gb|EDX19998.1| pantoate--beta-alanine ligase [Francisella tularensis subsp.
           novicida FTE]
          Length = 261

 Score = 42.5 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
            H+I  N  +     G V  +G    +H GH  ++++A    +   + ++S   +P    
Sbjct: 10  LHSIR-NSLIKQQKIGFVPTMG---ALHNGHISLIKKAKSEND---VVIVSIFVNPTQFN 62

Query: 64  QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
             +      +      +ILE +    L    F     +   +  + ++    LE+  ++ 
Sbjct: 63  NPNDYQTYPNQLQQDIQILESLDVDVL----FNPSEKDIYPDGNLLRIE-PKLEIANILE 117

Query: 124 G-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
           G                            G+       ++++  + +  +T  I     R
Sbjct: 118 GKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQR 177

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT   +  A  + 
Sbjct: 178 QPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|261364410|ref|ZP_05977293.1| pantoate--beta-alanine ligase [Neisseria mucosa ATCC 25996]
 gi|288567309|gb|EFC88869.1| pantoate--beta-alanine ligase [Neisseria mucosa ATCC 25996]
          Length = 278

 Score = 42.5 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  +    +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIKELREWRKNA-GSVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 L   G + +           +  +F +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLANEGVAVVFAPDEKELYPNVEQRFNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDEL 157
             +     +  V TV+             FGK       I++   E   F    V +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L++     A  L 
Sbjct: 174 RAPDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|255065198|ref|ZP_05317053.1| pantoate--beta-alanine ligase [Neisseria sicca ATCC 29256]
 gi|255050619|gb|EET46083.1| pantoate--beta-alanine ligase [Neisseria sicca ATCC 29256]
          Length = 278

 Score = 42.5 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  +    +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIKELREWRKNA-GSVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 L   G + +           +  +F +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLANEGVAVVFAPDEKELYPNVEQRFNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDEL 157
             +     +  V TV+             FGK       I++   E   F    V +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L++     A  L 
Sbjct: 174 RAPDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|254707932|ref|ZP_05169760.1| pantoate--beta-alanine ligase [Brucella pinnipedialis M163/99/10]
 gi|261315422|ref|ZP_05954619.1| pantothenate synthetase [Brucella pinnipedialis M163/99/10]
 gi|261304448|gb|EEY07945.1| pantothenate synthetase [Brucella pinnipedialis M163/99/10]
          Length = 293

 Score = 42.5 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|156973188|ref|YP_001444095.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio harveyi ATCC BAA-1116]
 gi|171769815|sp|A7MWN3|HLDE_VIBHB RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|156524782|gb|ABU69868.1| hypothetical protein VIBHAR_00868 [Vibrio harveyi ATCC BAA-1116]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|34539930|ref|NP_904409.1| nicotinic acid mononucleotide adenylyltransferase [Porphyromonas
           gingivalis W83]
 gi|81572202|sp|Q7MXU9|NADD_PORGI RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|34396241|gb|AAQ65308.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Porphyromonas gingivalis W83]
          Length = 197

 Score = 42.5 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 35/177 (19%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
            G+F+ +H+GH  +     +     PI  L F P P   +        L P  ++ +++E
Sbjct: 7   FGSFNPMHIGHLALANYLTEYT---PIGQLWFVPSP---LNPLKNTQELLPYDLRCELIE 60

Query: 84  KMGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVK---------TVITGTKFRFGKD 132
           +         +  +       E+ +      +  L             ++ G       D
Sbjct: 61  QA-------IRKDIRFQVLRIEELLPSPHYTIRTLRALSMLYPHHRFALLIGADNWQSFD 113

Query: 133 RAGDRGILQKRGE-----KYGFHTVFIDE------LRNNKSQIVSSSNIRTALTKGH 178
           R  D   L  + E     ++G+             + +     +SS+ IRT++ +G 
Sbjct: 114 RWKDHHRLMAKYELIIYPRFGYEVDDTTLPTGCRYIHDAPRIEISSTQIRTSILEGK 170


>gi|26249531|ref|NP_755571.1| putative glycerol-3-phosphate cytidyltransferase [Escherichia coli
           CFT073]
 gi|301017353|ref|ZP_07182111.1| riboflavin kinase [Escherichia coli MS 69-1]
 gi|26109939|gb|AAN82144.1|AE016766_232 Putative glycerol-3-phosphate cytidyltransferase [Escherichia coli
           CFT073]
 gi|300400230|gb|EFJ83768.1| riboflavin kinase [Escherichia coli MS 69-1]
 gi|324011883|gb|EGB81102.1| riboflavin kinase [Escherichia coli MS 60-1]
          Length = 135

 Score = 42.5 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 28/129 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD +H+GH  IL++A K+ +   + V    L+F         S    + + P +
Sbjct: 8   VITFGTFDVLHIGHINILKRAKKMGDYLIVGVSSDYLNF---------SKKQRYPVYPET 58

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +I+  + F   +  + +LE              ++  +   ++ G  +       G 
Sbjct: 59  ERLEIIRSLKFVDEVFIEESLELKG---------EYIKKFKADILVMGDDW------LGR 103

Query: 137 RGILQKRGE 145
               ++  E
Sbjct: 104 FDEYKELCE 112


>gi|16804088|ref|NP_465573.1| hypothetical protein lmo2049 [Listeria monocytogenes EGD-e]
 gi|224501152|ref|ZP_03669459.1| hypothetical protein LmonFR_01295 [Listeria monocytogenes FSL
           R2-561]
 gi|255028384|ref|ZP_05300335.1| hypothetical protein LmonL_02571 [Listeria monocytogenes LO28]
 gi|73921076|sp|Q8Y5L0|Y2049_LISMO RecName: Full=UPF0348 protein lmo2049
 gi|16411519|emb|CAD00127.1| lmo2049 [Listeria monocytogenes EGD-e]
          Length = 390

 Score = 42.5 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F F   +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTFAAKK 116


>gi|328471967|gb|EGF42844.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio parahaemolyticus 10329]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSMLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|302335398|ref|YP_003800605.1| Glycerol-3-phosphate cytidylyltransferase [Olsenella uli DSM 7084]
 gi|301319238|gb|ADK67725.1| Glycerol-3-phosphate cytidylyltransferase [Olsenella uli DSM 7084]
          Length = 131

 Score = 42.5 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 54/158 (34%), Gaps = 33/158 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A  + +   + + +          +            ++ 
Sbjct: 4   VITYGTFDLLHYGHISLLRRARGLGDYLVVALST-----DEFNHNEKGKVCYFSYERRKM 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   +    + T + G  +       G   
Sbjct: 59  LLEAIRYVDLVI-----------PEESWGQKRSDIHEYHIDTFVMGDDW------EGQFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L     + G   V++      ++  +SS+ I+ +L  
Sbjct: 102 FL----TEEGCSVVYLP-----RTPEISSTRIKDSLRS 130


>gi|295094997|emb|CBK84088.1| pantothenate synthetase [Coprococcus sp. ART55/1]
          Length = 281

 Score = 42.5 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 33/175 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +++++++  + + ++V     +P     +             
Sbjct: 25  GLVPTMGY---LHEGHQSLIKKSVEQNDRTVVSVFV---NPIQFGPNEDLESYPRDLEAD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-----------EVKTV--ITG- 124
            K+ E  G   +    F  E     A+ F+  + +  L             K V  + G 
Sbjct: 79  AKLCESTGADII----FNPEPEEMYADGFVSFINMTGLPNALCGLTRPIHFKGVCTVVGK 134

Query: 125 -------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNI 170
                   +  FG+  A    I+ +  +   F    +    +R       SS NI
Sbjct: 135 LFNIVTPDRAYFGQKDAQQLAIIMRMVKDLNFDIEIVGCPIIREADGLAKSSRNI 189


>gi|262275000|ref|ZP_06052811.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Grimontia hollisae CIP 101886]
 gi|262221563|gb|EEY72877.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Grimontia hollisae CIP 101886]
          Length = 478

 Score = 42.5 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V + +   R +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLNEAAKLGDRLIVAVNT-DESVRGLKGPGRPV---NPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   F+ E    + ++ I +VL   L     + G  ++
Sbjct: 399 VLAGLGAVDWVV--PFSEE----TPQRLISEVLPNML-----VKGGDYK 436


>gi|126734178|ref|ZP_01749925.1| pantoate--beta-alanine ligase [Roseobacter sp. CCS2]
 gi|126717044|gb|EBA13908.1| pantoate--beta-alanine ligase [Roseobacter sp. CCS2]
          Length = 280

 Score = 42.5 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 51/198 (25%), Gaps = 40/198 (20%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +   A +  +     +++   +P+                  
Sbjct: 27  GVVPTMG---ALHQGHLSLARAAREKCDR---VIVTIFVNPKQFDDPDDLKNYPRTEEDD 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVI-- 122
            + LE +G   +   +          + F   V V  L               V TV+  
Sbjct: 81  ARKLESIGVDLIYVPEPD----QIYPDGFATTVSVSGLTDMLCGESRPGHFDGVATVVSK 136

Query: 123 ----TGTKFRFGKDRAGDRGILQ-----KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               T   F F      D   LQ               V    +R      +SS   R  
Sbjct: 137 LFIQTAADFAF--FGEKDYQQLQIVRRMAHDLDIPIEVVGCPTIREEDGLAMSS---RNL 191

Query: 174 LTKGHVLNAAHLLGYRFT 191
           L        A +L     
Sbjct: 192 LLSDRSRVYAPMLAEVME 209


>gi|28897198|ref|NP_796803.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839596|ref|ZP_01992263.1| bifunctional protein HldE [Vibrio parahaemolyticus AQ3810]
 gi|260364188|ref|ZP_05776892.1| bifunctional protein HldE [Vibrio parahaemolyticus K5030]
 gi|260878103|ref|ZP_05890458.1| bifunctional protein HldE [Vibrio parahaemolyticus AN-5034]
 gi|260895986|ref|ZP_05904482.1| bifunctional protein HldE [Vibrio parahaemolyticus Peru-466]
 gi|54036038|sp|Q87SJ9|HLDE_VIBPA RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|28805407|dbj|BAC58687.1| ADP-heptose synthase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746883|gb|EDM57871.1| bifunctional protein HldE [Vibrio parahaemolyticus AQ3810]
 gi|308086721|gb|EFO36416.1| bifunctional protein HldE [Vibrio parahaemolyticus Peru-466]
 gi|308089827|gb|EFO39522.1| bifunctional protein HldE [Vibrio parahaemolyticus AN-5034]
 gi|308111915|gb|EFO49455.1| bifunctional protein HldE [Vibrio parahaemolyticus K5030]
          Length = 476

 Score = 42.5 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSMLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|322700726|gb|EFY92479.1| hypothetical protein MAC_01445 [Metarhizium acridum CQMa 102]
          Length = 684

 Score = 42.1 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 21/117 (17%)

Query: 187 GYRFTIESDVIHGEKIGR-TLGFPTANMQLSPDIL--LKEGVYAIRFR----------TQ 233
            + F  E  V  G       LGFPTAN+   PD +     GV+A   R            
Sbjct: 474 PFPFKFEGAVERGTGTSSAELGFPTANLSGVPDAVKTPLSGVFAAWVRLLPRGGNTADGL 533

Query: 234 DQTSYSGVANF----GRNPTMVPNGPLLLESFIFDFSQE--IYGQRCTVSFFDYLRP 284
               +  V       G  P + P   +     I     +   +G++  V    +L P
Sbjct: 534 SPDWHPAVVTIAPPRGAAPAVTPRNGVC--VHILHDFNDVTFFGRKLAVLLMGWLHP 588


>gi|238924999|ref|YP_002938515.1| glycerol-3-phosphate cytidyltransferase, TagD [Eubacterium rectale
           ATCC 33656]
 gi|238876674|gb|ACR76381.1| glycerol-3-phosphate cytidyltransferase, TagD [Eubacterium rectale
           ATCC 33656]
          Length = 422

 Score = 42.1 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +LE+A ++ +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLLHYGHIRLLERAKELGDYLIVGVTADDFD-------KTRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++   V     G+ ++      G  
Sbjct: 57  IEAVRATGLADEIIVEEY----------EGQKIDDIQRYGVDIFTVGSDWK------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L    +           +  ++++ VSSS IR 
Sbjct: 101 DYLNAYCKV----------VYLDRTEGVSSSEIRA 125


>gi|254374744|ref|ZP_04990225.1| hypothetical protein FTDG_00919 [Francisella novicida GA99-3548]
 gi|151572463|gb|EDN38117.1| hypothetical protein FTDG_00919 [Francisella novicida GA99-3548]
          Length = 261

 Score = 42.1 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 43/216 (19%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +  NIE    L          G V  +G    +H GH  ++++A    +   + ++S 
Sbjct: 1   MIIAKNIEQFNLLRESFTKDQKIGFVPTMG---ALHSGHISLIKKAKSEND---VVIVSI 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P      +      +      +ILE +    L    F     +   +  + ++    
Sbjct: 55  FVNPTQFNNPNDYQTYPNQLQQDIQILESLDVDVL----FNPSEKDIYPDGNLLRIE-PK 109

Query: 116 LEVKTVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           LE+  ++ G                            G+       ++++  + +  +T 
Sbjct: 110 LEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTK 169

Query: 153 FI--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            I     R      +SS N    LT   +  A  + 
Sbjct: 170 IIVCPTQREPSGLPLSSRN--KNLTSTDIEIANKIY 203


>gi|157867977|ref|XP_001682542.1| cholinephosphate cytidylyltransferase A [Leishmania major strain
           Friedlin]
 gi|68125996|emb|CAJ04162.1| putative cholinephosphate cytidylyltransferase A [Leishmania major
           strain Friedlin]
          Length = 592

 Score = 42.1 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 22/153 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH  ++  A+K  N   + V S             P   +     +      
Sbjct: 445 GVFDLCHAGHKKLMANALKFGNRLIVGVCSDE----ECASYKRPP--IMTTEER------ 492

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              + +   K+  E    S    I   ++ +  +  V+ G ++                 
Sbjct: 493 --INEVRLCKYVSEVIPNSPVTGITAEMIRYYNIHVVVCGEEYNT------PTDTYYAVP 544

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + G           + S ++S   IR A    
Sbjct: 545 RRMGILCTVPRTPGISTSVLIS--RIRAASDSS 575


>gi|332977067|gb|EGK13871.1| pantoate-beta-alanine ligase [Desmospora sp. 8437]
          Length = 291

 Score = 42.1 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 47/171 (27%), Gaps = 33/171 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +G    +H GH  ++ QA +      ++V     +P                    ++ 
Sbjct: 28  TMGY---LHEGHLSLIRQAAEECEQVVVSVFV---NPLQFGPGEDLDRYPRDLERDRQLA 81

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TV 121
           E+ G   L    FT              V V  L  +                      +
Sbjct: 82  EEAGADIL----FTPGVEEMYPGGAKTTVRVTGLTDRLCGASRPGHFDGVATVVSKLFHI 137

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNI 170
           +   +  FG+  A    ++Q+           +    +R      +SS N+
Sbjct: 138 VEPDRAYFGQKDAQQVAVIQQMVHDLNMPVEVVPCPTVREEDGLAMSSRNV 188


>gi|229541497|ref|ZP_04430557.1| glycerol-3-phosphate cytidylyltransferase [Bacillus coagulans 36D1]
 gi|229325917|gb|EEN91592.1| glycerol-3-phosphate cytidylyltransferase [Bacillus coagulans 36D1]
          Length = 132

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  LS +              +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRARALGDYL-IVGLSSDE-----FNEIKNKKSYHSYENRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           S EQ I    ++   V   + G  ++      G    
Sbjct: 58  ILEAIRYVDQVIPEH--------SWEQKIDD--IKKYNVDVFVMGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+          V++      ++  +S+S I+  L
Sbjct: 102 LKDYC-----EVVYLP-----RTVGISTSKIKKDL 126


>gi|327392771|dbj|BAK10193.1| pantoate-beta-alanine ligase PanC [Pantoea ananatis AJ13355]
          Length = 276

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 38/227 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A +  +   I ++S   +P    +               + L
Sbjct: 21  TMGN---LHEGHLTLVDEARERGD---IVIVSIFVNPMQFDRPDDLARYPRTLQEDCEKL 74

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVE----------------WLEVKTVI---- 122
            + G   +    F    A    +    +  VE                +  V T++    
Sbjct: 75  NRHGVDVV----FAPSPAEVYPQGLANQTFVEVPVLSSLLEGASRPGHFRGVATIVSKLF 130

Query: 123 --TGTKF-RFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       I++K     GF    V +  +R      +SS N    LT  
Sbjct: 131 NLVQPDIACFGEKDFQQLAIIRKMVADMGFDIEIVGVPTVRAKDGLALSSRN--GYLTDD 188

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
               A  L      + + + +GE+    +    AN+ L    L  +G
Sbjct: 189 ERKLAPGLSQVMNEMAARLANGERQIDDI-IDAANLSLQEKGLRPDG 234


>gi|317182582|dbj|BAJ60366.1| hypothetical protein HPF57_1292 [Helicobacter pylori F57]
          Length = 174

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 23/178 (12%)

Query: 12  SLPNHLKGGVVAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           ++ + L+   +A+  G+FD +H  H  I++Q +++   + + VL     P          
Sbjct: 3   AMNSVLRRKELALYGGSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKP 56

Query: 70  FTL---SPPSIQEKILEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITG 124
             L   +     E+ L+  G   ++   F    E A  + E  I    +   +   ++ G
Sbjct: 57  CFLDAQTRFRELERALK--GMDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIG 114

Query: 125 TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
                      +   L KR E   F  +   E++              +SSS IR +L
Sbjct: 115 ADCLRHLSSWTNAKELLKRVELVVFERIGYKEIQFKGRYFPLKGIDAPISSSAIRASL 172


>gi|317181059|dbj|BAJ58845.1| hypothetical protein HPF32_1263 [Helicobacter pylori F32]
          Length = 174

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GMDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IRT+L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRTSL 172


>gi|291616318|ref|YP_003519060.1| PanC [Pantoea ananatis LMG 20103]
 gi|291151348|gb|ADD75932.1| PanC [Pantoea ananatis LMG 20103]
          Length = 284

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 38/227 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A +  +   I ++S   +P    +               + L
Sbjct: 29  TMGN---LHEGHLTLVDEARERGD---IVIVSIFVNPMQFDRPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVE----------------WLEVKTVI---- 122
            + G   +    F    A    +    +  VE                +  V T++    
Sbjct: 83  NRHGVDVV----FAPSPAEVYPQGLANQTFVEVPVLSSLLEGASRPGHFRGVATIVSKLF 138

Query: 123 --TGTKF-RFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       I++K     GF    V +  +R      +SS N    LT  
Sbjct: 139 NLVQPDIACFGEKDFQQLAIIRKMVADMGFDIEIVGVPTVRAKDGLALSSRN--GYLTDD 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
               A  L      + + + +GE+    +    AN+ L    L  +G
Sbjct: 197 ERKLAPGLSQVMNEMAARLANGERQIDDI-IDAANLSLQEKGLRPDG 242


>gi|39997183|ref|NP_953134.1| ADP-heptose synthase [Geobacter sulfurreducens PCA]
 gi|54036013|sp|Q74BF6|HLDE_GEOSL RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|39984073|gb|AAR35461.1| ADP-heptose synthase [Geobacter sulfurreducens PCA]
          Length = 490

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 29/166 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPS 76
           K  V   G FD +H+GH   L++A    +   + VL  N       ++       L    
Sbjct: 352 KRVVFTNGCFDLLHVGHVKYLQKARSFGD---LLVLGLNSDASIRRLKGEKRP--LIGQE 406

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  IL  +     ++   F  +             L+E L    ++ G  +       G
Sbjct: 407 ERAHILAALDCIDYVVV--FDED---------TPLNLIETLRPAVLVKGGDYTL----DG 451

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             G  ++  E YG     +  +        S++NI   + K +   
Sbjct: 452 VVG--REVVESYGGRVELVAFV-----DGRSTTNIIEKILKAYGEE 490


>gi|255524940|ref|ZP_05391887.1| citrate lyase ligase [Clostridium carboxidivorans P7]
 gi|255511312|gb|EET87605.1| citrate lyase ligase [Clostridium carboxidivorans P7]
          Length = 316

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 59/172 (34%), Gaps = 29/172 (16%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+     +   + V+S       F+     + + +  +        +  I+ K
Sbjct: 128 LGHQYLIEKVASENDVVHLFVVSEDASIIPFSVRYDLVKKGTKHL--------KNVIIHK 179

Query: 85  MGFSALIRYKFTLET-----------ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            G   +    F               A     +  ++ +V  L +     G +      R
Sbjct: 180 AGNYIISSATFPSYFIKDGRSVVDTHARLD-LEIFKRYIVPALGINRRYVGEEPYCKVTR 238

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             +  I++   EK G   + +  L   K + +S+S +R  + +G +     L
Sbjct: 239 KYN-EIMKSTLEKAGVECIIVPRL-ELKGEAISASKVRNYIKEGKMAEVKKL 288


>gi|42780743|ref|NP_977990.1| pantoate--beta-alanine ligase [Bacillus cereus ATCC 10987]
 gi|78099033|sp|Q73AV3|PANC_BACC1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|42736663|gb|AAS40598.1| pantoate--beta-alanine ligase [Bacillus cereus ATCC 10987]
          Length = 282

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+   L++     A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNV--YLSQEEREEAPHLYRSLCIAKERIEAGERNAEII 223


>gi|325571021|ref|ZP_08146593.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156106|gb|EGC68292.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus
           casseliflavus ATCC 12755]
          Length = 141

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 36/168 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L  A +  +   + + +  FN     ++Q     +       +
Sbjct: 4   VITYGTFDLLHYGHINLLRTAKQKGDYLIVGLSTDEFN-----LLQKGKTSYF--SYEKR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGD 136
           +++LE +     +I             E + QK+  ++   V   + G  +      +G 
Sbjct: 57  KQLLEAIRYVDLVI-----------PEENWEQKITDMKKYNVDIFVIGDDW------SGK 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
              L     + G   V++      ++  VS++ I+  LT  +  N + 
Sbjct: 100 FDYL---TTESGVEVVYLP-----RTPEVSTTQIKADLTMFNQNNVSK 139


>gi|254778744|ref|YP_003056849.1| pantoate--beta-alanine ligase [Helicobacter pylori B38]
 gi|254000655|emb|CAX28564.1| Pantoate-beta-alanine ligase (Pantothenate synthetase)
           [Helicobacter pylori B38]
          Length = 276

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLRECRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + EK+G SA+    F  +       +  Q++ +
Sbjct: 55  NPTQFGANEDFSAYPHPLEKDLALCEKLGVSAV----FVPKIGEMYPCEAEQRLKL 106


>gi|163815434|ref|ZP_02206807.1| hypothetical protein COPEUT_01597 [Coprococcus eutactus ATCC 27759]
 gi|158449071|gb|EDP26066.1| hypothetical protein COPEUT_01597 [Coprococcus eutactus ATCC 27759]
          Length = 281

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 33/175 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +++++++  + + ++V     +P     +             
Sbjct: 25  GLVPTMGY---LHEGHQSLIKKSVEQNDRTVVSVFV---NPIQFGPNEDLESYPRDLEAD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL-----------EVKTV--ITG- 124
            K+ E  G   +    F  E     A+ F+  + +  L             K V  + G 
Sbjct: 79  AKLCEATGADII----FNPEPEEMYADGFVSFINMTGLPNALCGLTRPIHFKGVCTVVGK 134

Query: 125 -------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNI 170
                   +  FG+  A    I+ +  +   F    +    +R       SS NI
Sbjct: 135 LFNIVTPDRAYFGQKDAQQLAIIMRMVKDLNFDIEIVGCPIIREADGLAKSSRNI 189


>gi|315636618|ref|ZP_07891852.1| nicotinate-nucleotide adenylyltransferase [Arcobacter butzleri
           JV22]
 gi|315479127|gb|EFU69826.1| nicotinate-nucleotide adenylyltransferase [Arcobacter butzleri
           JV22]
          Length = 182

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 19/170 (11%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AI  G+FD IH+ H  I+++A++      + ++       T +      F L P  ++ 
Sbjct: 3   IAIFGGSFDPIHIAHKAIVKRALEELEIDKLIIV------PTYLNPFKSSFYLEP-KVRF 55

Query: 80  KILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV--ITGTKFRFGKDRAG 135
           ++L+K+      +    + +     S        L +  +   +  I G       D+  
Sbjct: 56  ELLKKVFEKIEKVEISDYEINQEKLSYSFNTVNYLKDLYKASKIYFILGQDNVENLDKWY 115

Query: 136 DRGILQKRGE-----KYGFHTVFIDELRN-NKSQIVSSSNIRTALTKGHV 179
               L+K  E     + G+ +  + + +  N    VSS+ +RT +   ++
Sbjct: 116 KIEELKKMVEFVIATRSGYKSDKLKDFKTLNIDIDVSSTLLRTQIDTKYI 165


>gi|33861774|ref|NP_893335.1| putative ADP-heptose synthase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33640142|emb|CAE19677.1| putative ADP-heptose synthase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 500

 Score = 42.1 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 22/121 (18%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+IN++        ++  G+F+ IH GH   L++A  I NN  +  +  +P      Q  
Sbjct: 9   IQINEAC--KYNNCILGYGHFNSIHTGHIRYLKRAKDI-NNILLVAVLKDPQ----FQG- 60

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                +     + + + ++G +  I             +  ++K  V  +  + +I G +
Sbjct: 61  ----VIFTQEERAESIAQLGIANAIV---------LLPDNNLEK-AVNIINPRELILGKE 106

Query: 127 F 127
           +
Sbjct: 107 Y 107


>gi|332671527|ref|YP_004454535.1| cytidyltransferase-related domain-containing protein [Cellulomonas
           fimi ATCC 484]
 gi|332340565|gb|AEE47148.1| cytidyltransferase-related domain protein [Cellulomonas fimi ATCC
           484]
          Length = 150

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 24/154 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A +  +     V+        +++ +     + P + + +IL  
Sbjct: 10  GAYDLFHVGHLNILRHAKRRCDYLIAGVV-----ADEVLELTKGRRPIIPLAERMEILRH 64

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              S +         A    ++      V +     +  G  +R         G  +   
Sbjct: 65  --ISYV-----DEVVAEVQPDKVETWRSVGF---DVIFKGDDWR---------GTPKGDR 105

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +  F  V ++ +    +   SS+ +R AL    
Sbjct: 106 LERDFAAVGVEVIYFPYTVHTSSTALRRALAAID 139


>gi|256546078|ref|ZP_05473431.1| pantoate--beta-alanine ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398195|gb|EEU11819.1| pantoate--beta-alanine ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 279

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 41/211 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I+  + +    K      G V  +G    +H GH  ++++A+   +   I V+S
Sbjct: 1   MKVIKKIDELKDVLKDFKKEGKSIGLVPTMGF---LHKGHASLIKKAVSEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY----SAEQFIQK 110
              +P     +          +   K+ E +G   +    F  E +       A   I+ 
Sbjct: 55  DFVNPIQFGPNEDLEAYPRDINADSKLCEDLGADFI----FNPEPSEMYHDKKAFVDIEG 110

Query: 111 VLVEWLEVKTV---------------ITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           +       +                 I G     FG+  A    I++K           +
Sbjct: 111 LSDNLCGARRAGHFRGVCTVCTKLFNIVGPNRAYFGQKDAQQLSIIKKLVFDLNIPVEIV 170

Query: 155 --DELRNNKSQIVSSSNIRTALTKGHVLNAA 183
               +R +    +SS   R          AA
Sbjct: 171 ACPIVREDDGLAMSS---RNTYLSADERKAA 198


>gi|189485722|ref|YP_001956663.1| ADP-heptose synthase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287681|dbj|BAG14202.1| ADP-heptose synthase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 160

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + L    K  +   G FD +HLGH  + E+A K      I  ++ +     +     P  
Sbjct: 17  KKLQKAGKKVIFTNGCFDLLHLGHINLFEKA-KSMGEVLIVAINSDKSLSCLKGPQRP-- 73

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            LS    + K L  +     ++   F  +           K ++  L    ++ G  ++ 
Sbjct: 74  -LSWEKDRAKQLLSLKSVDYVVV--FDEQ---------TPKEILSELRPDILVKGGDYKL 121

Query: 130 G 130
            
Sbjct: 122 S 122


>gi|68644525|emb|CAI34589.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 134

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 32/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +                +      ++ 
Sbjct: 4   VITYGTFDLLHYGHINLLKRAKDLGDYLIVALSTDE------FNLQKDKISYFNYQQRKI 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S EQ  ++  V+       + G  +       G    
Sbjct: 58  LLESIRYVDLVIP--------EISWEQ--KREDVKKYYADIFVIGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L    +  G   V++      +++ +S++ I+  L K  
Sbjct: 102 L----KDEGVEVVYLP-----RTKEISTTQIKEDLNKTK 131


>gi|221058453|ref|XP_002259872.1| ethanolamine-phosphate cytidylyltransferase [Plasmodium knowlesi
           strain H]
 gi|193809945|emb|CAQ41139.1| ethanolamine-phosphate cytidylyltransferase,putative [Plasmodium
           knowlesi strain H]
          Length = 594

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 25/170 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPSIQEKIL 82
           G+FD  H+GH  ILE A K+ +   +       H   +++         +S       +L
Sbjct: 435 GSFDIFHIGHLKILENAKKLGDYLIVG-----MHSDEVVRKMKGKYFPVVSLLERTLNVL 489

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT--KFRFGKDRAG----- 135
                  ++            A   I +  ++  ++  V+ GT   + +  +        
Sbjct: 490 AMKVVDDVVI----------GAPWLISESFIKRFQIDVVVRGTVVDYFYSSNELDPYAIP 539

Query: 136 -DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               I Q+   + G  T  I E        + S+  +    + ++    +
Sbjct: 540 KKLNIYQELSSESGITTFEIIERIEKNKNCLMSTISKRKKKEDNIWKVNN 589


>gi|253579430|ref|ZP_04856700.1| glycerol-3-phosphate cytidyltransferase [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251849528|gb|EES77488.1| glycerol-3-phosphate cytidyltransferase [Ruminococcus sp.
           5_1_39BFAA]
          Length = 435

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD  H GH+ I+++A  + +   + V   SF+            +        +
Sbjct: 4   VITYGTFDLFHKGHYNIIKRAKALGDYLIVGVTSESFD-------IERGKLNVRDSLIKR 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + + + G    +I  ++          Q  +   +   ++  ++ G+ +R      G  
Sbjct: 57  IENVRRTGLADEIIIEEY----------QGQKVNDIIKYDIDVLVVGSDWR------GKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L+             D +   +++ +SS+ +R
Sbjct: 101 DYLKNYC----------DVVYLERTKNISSTKLR 124


>gi|158315134|ref|YP_001507642.1| cell divisionFtsK/SpoIIIE [Frankia sp. EAN1pec]
 gi|158110539|gb|ABW12736.1| cell divisionFtsK/SpoIIIE [Frankia sp. EAN1pec]
          Length = 822

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 17/136 (12%)

Query: 57  PHPRTI-------IQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY---SAEQ 106
           PH R +           +    L+    + ++ +K G   L  Y+     A         
Sbjct: 561 PHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVENLANYRSARARAANGASDPRL 620

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVS 166
               ++V+   V   +       G+D A     L + G  YG H +   +  ++   +  
Sbjct: 621 ARILLVVDEFHVLFDV---DDAVGRDAAASLETLVRMGRAYGIHVLLSSQTPSSPVVMGG 677

Query: 167 SS----NIRTALTKGH 178
           S+     +R AL    
Sbjct: 678 STVRQMEVRVALRCDD 693


>gi|257069890|ref|YP_003156145.1| Glycerol-3-phosphate cytidylyltransferase [Brachybacterium faecium
           DSM 4810]
 gi|256560708|gb|ACU86555.1| Glycerol-3-phosphate cytidylyltransferase [Brachybacterium faecium
           DSM 4810]
          Length = 133

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 31/154 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A  + +   + + +          +            + +
Sbjct: 4   VITYGTYDLLHYGHIELLRRARSLGDYLVVALSTDE------FNAGKGKTCYYSWEERRR 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE + F  L+  +          EQ ++   V    + T + G  +       G    L
Sbjct: 58  MLESIRFVDLVIPETN-------WEQKVED--VARYNIDTFVIGDDW------EGKFNFL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           + +        V++      ++  +S++ I+  L
Sbjct: 103 RDQC-----EVVYLP-----RTPDISTTQIKGDL 126


>gi|299822534|ref|ZP_07054420.1| glycerol-3-phosphate cytidylyltransferase [Listeria grayi DSM
           20601]
 gi|299816063|gb|EFI83301.1| glycerol-3-phosphate cytidylyltransferase [Listeria grayi DSM
           20601]
          Length = 127

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 35/154 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + + +          +            ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKALGDYLVVGLSTDE------FNAKKHKEAYHNYENRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK   +E  ++  ++ G  +       G+  
Sbjct: 58  ILEAIRYVDEVI-----------PETDWEQKATDIEKYDISVLVMGDDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            L+          V++      +++ +S+S I+ 
Sbjct: 101 ALRAYC-----EVVYLP-----RTKGISTSQIKN 124


>gi|157372226|ref|YP_001480215.1| pantoate--beta-alanine ligase [Serratia proteamaculans 568]
 gi|229470288|sp|A8GIZ7|PANC_SERP5 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|157323990|gb|ABV43087.1| pantoate--beta-alanine ligase [Serratia proteamaculans 568]
          Length = 284

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   I V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMQLIDEARARAD---IVVVSIFVNPMQFERPEDLASYPRTLQEDSEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------------------ 124
            + G   +    F    A+   +   Q+  V+   + T++ G                  
Sbjct: 83  TRRGVELV----FAPAPADVYPQGLEQQTYVDVPGISTMLEGASRPGHYRGVATIVSKLF 138

Query: 125 -----TKFRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
                    FG+       +++K     G+    V +  +R      +SS
Sbjct: 139 NLVQPDLACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSS 188


>gi|31563024|sp|Q9UYT0|COAD_PYRAB RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
          Length = 156

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 34/166 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I + S +      +++      + P   + K
Sbjct: 6   VVVGGTFDRLHLGHKALLRKAFEVGKIVYIGLTSDDM-----VKNKPYAEKILPYERRLK 60

Query: 81  -ILEKMGFSALIRYK---------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++E +  +   RY+         FT    +  A    ++     L V            
Sbjct: 61  DLIEFLEVNNFRRYRIIKINNAIGFTTRIRSLEAIVVSEETYKGALLV------------ 108

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +RA +   L+          + I  +++     +SSS IR  L  
Sbjct: 109 -NRAREEVGLRPL------EIIVIPIIKSKLGDKISSSLIRAGLID 147


>gi|14521626|ref|NP_127102.1| phosphopantetheine adenylyltransferase [Pyrococcus abyssi GE5]
 gi|5458845|emb|CAB50332.1| Phosphopantetheine adenylyltransferase [Pyrococcus abyssi GE5]
          Length = 157

 Score = 42.1 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 34/166 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I + S +      +++      + P   + K
Sbjct: 7   VVVGGTFDRLHLGHKALLRKAFEVGKIVYIGLTSDDM-----VKNKPYAEKILPYERRLK 61

Query: 81  -ILEKMGFSALIRYK---------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            ++E +  +   RY+         FT    +  A    ++     L V            
Sbjct: 62  DLIEFLEVNNFRRYRIIKINNAIGFTTRIRSLEAIVVSEETYKGALLV------------ 109

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +RA +   L+          + I  +++     +SSS IR  L  
Sbjct: 110 -NRAREEVGLRPL------EIIVIPIIKSKLGDKISSSLIRAGLID 148


>gi|289209203|ref|YP_003461269.1| pantoate/beta-alanine ligase [Thioalkalivibrio sp. K90mix]
 gi|288944834|gb|ADC72533.1| pantoate/beta-alanine ligase [Thioalkalivibrio sp. K90mix]
          Length = 293

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 1  MHVFHN----IEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVL 53
          M +  +    + +++      +G +     +G+   +H GH  ++  A   +      V+
Sbjct: 1  MRILRDRPQLVAMHREWARKGRGTIALIPTMGH---LHEGHMTLIRHARARSQR---VVV 54

Query: 54 SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          S   +P    +               ++L + G  A+  
Sbjct: 55 SIFVNPMQFDRPEDLERYPRTLEEDSRLLTEAGVDAVFC 93


>gi|147815972|emb|CAN70416.1| hypothetical protein VITISV_021860 [Vitis vinifera]
          Length = 283

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 34/199 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P         +  ++  
Sbjct: 72  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIIANKGPPVL--SMEERLVLVSG 125

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I        A    EQF+  +  E  ++  +I G       D      + +K 
Sbjct: 126 LKWVDEVIA---NAPYAIT--EQFMDTLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKKA 179

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGHVLNAAHLLGYRF---------TI 192
           G                +++ VSS++I  R               G              
Sbjct: 180 GRYKQIK----------RTEGVSSTDIVGRILSYXKDTKTHEDHNGSTSLHGERDNTNEA 229

Query: 193 ESDVIHGEKIGRTLGFPTA 211
           E +    + +  +   PT+
Sbjct: 230 EGEKCQSKGLHLSHFLPTS 248


>gi|327401763|ref|YP_004342602.1| phosphopantetheine adenylyltransferase [Archaeoglobus veneficus
           SNP6]
 gi|327317271|gb|AEA47887.1| Phosphopantetheine adenylyltransferase [Archaeoglobus veneficus
           SNP6]
          Length = 153

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 65/163 (39%), Gaps = 28/163 (17%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           + ++  V   G F+ +H GH  +++ AI +        ++ +   R  ++S  P + +  
Sbjct: 3   DDMRKKVALGGTFEPLHEGHKKLIDVAINL--GEVTIGITCDELARKRLRSVLP-YEIRA 59

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV--KTVITGTKFRFGKD 132
            ++++ +L + GF   I                I+ +  + LEV    ++   +      
Sbjct: 60  ENLRQYVLRRYGFEPEIV--------------KIEDIYGKTLEVDFDYIVVSPETY---- 101

Query: 133 RAGDRGILQKRGEKYG---FHTVFIDELRNNKSQIVSSSNIRT 172
             G   ++ ++ ++ G      V +D +       +S++ I+ 
Sbjct: 102 --GVAELINEKRKEMGKKEMEIVKVDWVIAEDGNPISATRIKK 142


>gi|237745195|ref|ZP_04575676.1| citrate (pro-3S)-lyase ligase [Fusobacterium sp. 7_1]
 gi|229432424|gb|EEO42636.1| citrate (pro-3S)-lyase ligase [Fusobacterium sp. 7_1]
          Length = 345

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A        + ++S       F    R +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKASSENEVLHLFIVSDDSSLVPFEVRKRLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIEVFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      + +   + + +  +S+S +R  +  G++ +  +L
Sbjct: 271 MLKKLPE-NNIECIVVPRKKYSDNV-ISASTVRQIIKNGNLEDLKNL 315


>gi|237640592|pdb|3GLV|A Chain A, Crystal Structure Of The Lipopolysaccharide Core
           Biosynthesis Protein From Thermoplasma Volcanium Gss1
 gi|237640593|pdb|3GLV|B Chain B, Crystal Structure Of The Lipopolysaccharide Core
           Biosynthesis Protein From Thermoplasma Volcanium Gss1
          Length = 143

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 23/156 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +HLGH   L+++ K+ +   + V       R     ++    +   + +  
Sbjct: 5   VMATGVFDILHLGHIHYLKESKKLGDELVVVV------ARDSTARNNGKIPIFDENSRLA 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++ ++                +  +     + V+      +  G   +F      D   L
Sbjct: 59  LISELKVV-------DRAILGHEGDMMKTVIEVK---PDIITLGYDQKF------DEAEL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           Q +  K G     +  +     Q+ SSS++R  + +
Sbjct: 103 QSKINKLGITVKIV-RISKYDGQLNSSSSVRKKIME 137


>gi|157164140|ref|YP_001467355.1| gerC2 protein [Campylobacter concisus 13826]
 gi|112801939|gb|EAT99283.1| putative nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter concisus 13826]
          Length = 293

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 60/157 (38%), Gaps = 19/157 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SF-NPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+FD +HLGH  I++ A+   +   + ++ +F +P               +PP ++ K +
Sbjct: 8   GSFDPVHLGHDSIVKMALSGLDIDKLIIMPTFISPFKSEF---------SAPPELRLKWI 58

Query: 83  EKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRFGKDRAGDRG 138
            ++  G   +    + +  A         K L E  +++   +I G       D+     
Sbjct: 59  REIWGGLEKVDISDYEINLARPVPTIETVKYLYEKFKIEKFYLIIGADHLATLDKWHGYE 118

Query: 139 ILQKR----GEKYGFHTVFIDELRNNKSQIVSSSNIR 171
            L+        K     +  +  + +    VSSS IR
Sbjct: 119 ELKNLVQFVIAKRNHIEIPRNLQKMDVHVDVSSSQIR 155


>gi|327254541|gb|EGE66157.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli
           STEC_7v]
          Length = 134

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 32/164 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             I+  +     +    F  E+    AE       +       ++ G  +      AG  
Sbjct: 57  MAIIAGLACVDGV----FLEESLAQKAE------YLRGYSADVLVMGDDW------AGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
                  E   F           ++  VS++ I   + +  +  
Sbjct: 101 DSFAYICEVVYF----------PRTPSVSTTGIIEVIRRARMTK 134


>gi|306828905|ref|ZP_07462097.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus mitis ATCC
           6249]
 gi|304429083|gb|EFM32171.1| glycerol-3-phosphate cytidylyltransferase [Streptococcus mitis ATCC
           6249]
          Length = 381

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 28/156 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  +L +A +  +   + V     HP     S     T      +  I+  
Sbjct: 254 GTFDLFHVGHLNLLRRAKEQCDYLIVGV-----HPN---ASHKGKKTFISFQERLDIIAS 305

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
           + +       F  +     ++ +             +  G+ ++            +   
Sbjct: 306 ISYVDKAVESFPED-----SDAW------NIYHYDKLFVGSDYK-------GTERFKNYE 347

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            + G   V I           SSS +R  +++ +V 
Sbjct: 348 RELGEKGVEIIYFPYTDGT--SSSQLRALISEKNVD 381


>gi|261381368|ref|ZP_05985941.1| pantoate--beta-alanine ligase [Neisseria subflava NJ9703]
 gi|284795642|gb|EFC50989.1| pantoate--beta-alanine ligase [Neisseria subflava NJ9703]
          Length = 278

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  +              +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIKELREWRKTAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  +F +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAGEGVAVVFAPDEKELYPNVEQRFNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDELR 158
            +     +  V TV+             FGK       I++   E   F    V +D  R
Sbjct: 115 GKFRPGHFRGVATVVTKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +    +SS N    L++     A  L 
Sbjct: 175 ASDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|195375130|ref|XP_002046356.1| GJ12852 [Drosophila virilis]
 gi|194153514|gb|EDW68698.1| GJ12852 [Drosophila virilis]
          Length = 515

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 53/198 (26%), Gaps = 33/198 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           Q     +   VV  G FD IH+GH       +L    ++        ++         + 
Sbjct: 133 QPASQQMYPTVVLGGTFDRIHIGHKIFLTQAVLRACKRLVVGVTTAAMT---------KG 183

Query: 66  SSPIFTLSPPSIQEKILEK--MGFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKT 120
                 + P   +   L +  +     +                +  +            
Sbjct: 184 KILPELILPVEQRIAELREFLLDIDNTLQYDIVPIDDPFGPTQHDPDMDM---------- 233

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGH 178
           ++   +   G  +  +    ++  +   F    ++   ++      VSSSN R  L    
Sbjct: 234 IVVSAETLRGGQKVNEIRASKQLRQLDIFAIDIVESNVHDGIHESKVSSSNTRIDLLGTR 293

Query: 179 VL--NAAHLLGYRFTIES 194
                A   L  R  I  
Sbjct: 294 WRQPEARPQLPVRPYIIG 311


>gi|319638504|ref|ZP_07993266.1| pantothenate synthetase [Neisseria mucosa C102]
 gi|317400253|gb|EFV80912.1| pantothenate synthetase [Neisseria mucosa C102]
          Length = 278

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  +              +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIKELREWRKTAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  +F +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAGEGVAVVFAPDEKELYPNVEQRFNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDELR 158
            +     +  V TV+             FGK       I++   E   F    V +D  R
Sbjct: 115 GKFRPGHFRGVATVVTKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +    +SS N    L++     A  L 
Sbjct: 175 ASDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|313906695|ref|ZP_07840008.1| cytidyltransferase-related domain protein [Eubacterium
           cellulosolvens 6]
 gi|313468465|gb|EFR63854.1| cytidyltransferase-related domain protein [Eubacterium
           cellulosolvens 6]
          Length = 145

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 26/162 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL+ A    ++  + V +       +++       + P   + +I+
Sbjct: 9   TTGVFDMFHIGHLNILKNAKSRCDHLIVGVST-----DELVKQYKNKKPIIPFEERIEIV 63

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           + +     ++         +    Q  +      L    +  G+ +      +     + 
Sbjct: 64  KAIKYVDEVVPQ------ISMDKRQAWEN-----LHYNVLFHGSDW----KGSAMYDKVI 108

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           +  E+ G   VF+       +  VSS+ +   L K       
Sbjct: 109 QDLEEVGVKVVFLP-----HTHGVSSTLLADVLYKQQAEEFH 145


>gi|222149101|ref|YP_002550058.1| pantoate--beta-alanine ligase [Agrobacterium vitis S4]
 gi|254778209|sp|B9JXS2|PANC_AGRVS RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|221736086|gb|ACM37049.1| pantoate--beta-alanine ligase [Agrobacterium vitis S4]
          Length = 289

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 58/199 (29%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + + I   +   +  +        V  +G    +H GH  ++EQA        +TV S
Sbjct: 1   MEIINTIAALRHRLDACRKAGKSIGFVPTMGY---LHKGHLTLVEQAKAEN---AVTVAS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    +               ++LE  G   L    F    A+         V + 
Sbjct: 55  IFVNPLQFGKGEDLEKYPRDLERDSEMLEAAGVDFL----FAPGVADMYPRPMETVVDLP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HT 151
            L               V TV+             FG+       I+++  +        
Sbjct: 111 GLGGELEGKARPGHFAGVATVVTKLFNIVQPDAAYFGEKDYQQVAIIRRMVDDLAMPVRV 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V +  +R       SS N+
Sbjct: 171 VPVATVREADGLACSSRNV 189


>gi|222479381|ref|YP_002565618.1| cytidyltransferase-related domain protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452283|gb|ACM56548.1| cytidyltransferase-related domain protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 164

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 31/159 (19%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPI--FTLSPPSI 77
           VA+G  FD +H GH  + E+A ++ +   +TV L+ +      +   +      + P   
Sbjct: 3   VALGGTFDPVHDGHRKLFERAFELGD---VTVGLTSDR-----LAPKTRHVERYVRPYDR 54

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR---FGKDRA 134
           +++ LE              E A+ + E   +  + E  +   +    +F       +  
Sbjct: 55  RKRDLEA-------------ELADLAGEHGREFDVRELTDPTGIAVEPEFDALIVSPETR 101

Query: 135 GDRGILQKRGEKYGF---HTVFIDELRNNKSQIVSSSNI 170
                + +   + G      V +D +     + +SS+ I
Sbjct: 102 DGGDRINEIRRERGHDPLELVVVDHVSAEDGERISSTRI 140


>gi|297581061|ref|ZP_06942986.1| sugar kinase [Vibrio cholerae RC385]
 gi|297534887|gb|EFH73723.1| sugar kinase [Vibrio cholerae RC385]
          Length = 476

 Score = 42.1 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|150401726|ref|YP_001325492.1| cytidyltransferase-like protein [Methanococcus aeolicus Nankai-3]
 gi|327488402|sp|A6UWK8|RIBL_META3 RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|150014429|gb|ABR56880.1| cytidyltransferase-related domain [Methanococcus aeolicus Nankai-3]
          Length = 156

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 22/169 (13%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
            +  K  V+  G FD +H GHH  L+ A  + +   I V++ +      ++       + 
Sbjct: 4   NDKTKKIVLTAGTFDLLHPGHHNTLKYAKSLGDEL-IVVIARD----ETVKKIKGRKPVI 58

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           P + + +++E +      I    T +                 ++   ++ G        
Sbjct: 59  PENQRREMIEAIKPVDKAILGSLTDKLEPIL-----------KIKPDIIVLGPD-----Q 102

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
              D   L+   +K G     +           SS +I   + K     
Sbjct: 103 ITFDAENLKNELKKLGLDVEIVKTKEYTNCDFHSSYDIIKEIVKRWCNK 151


>gi|33415339|gb|AAQ18191.1| probable pantoate-beta-alanine ligase [uncultured bacterium]
          Length = 257

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 14/112 (12%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIAN----NSPITVL 53
           M + H I E+  ++       V    +GN   +H GH  ++ QA  IA+       + V 
Sbjct: 1   MKIIHTIAELRTTVAEATSAPVFVPTMGN---LHEGHLALIRQARGIADQGGWGRGLVVA 57

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
           S   +      +              ++L   G   +    F  + A    E
Sbjct: 58  SIFVNRLQFGPNEDFDRYPRTLQRDAELLAGAGCDVV----FAPDEAELYPE 105


>gi|258626891|ref|ZP_05721695.1| protein hldE [Vibrio mimicus VM603]
 gi|258580814|gb|EEW05759.1| protein hldE [Vibrio mimicus VM603]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|15607078|ref|NP_214460.1| pantothenate synthetase [Aquifex aeolicus VF5]
 gi|8134617|sp|O67891|PANC_AQUAE RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|2984326|gb|AAC07847.1| pantothenate synthetase [Aquifex aeolicus VF5]
          Length = 282

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 33/193 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +    N   N+       G V  +G    +H GH  +++ A    +   I V+S   +P 
Sbjct: 8   IKDLRNFLKNKRCEGKEIGFVPTMGY---LHEGHRQLIKLARMQND---IVVVSIFVNPT 61

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL---- 116
              +               +I E+ G   +    F  E      + +  KV V  L    
Sbjct: 62  QFGEGEDYDRYPRDLERDLEICEEEGVDVV----FAPEVDEIYPKGYRTKVCVGELGKVL 117

Query: 117 ----------EVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE--L 157
                      V T++          +  FG+       I+++  E        +    +
Sbjct: 118 EGEFRPGHFDGVATIVVKLFNIVQPNRAYFGEKDYQQLKIIEQVVEDLNIPVEIVPVPIV 177

Query: 158 RNNKSQIVSSSNI 170
           R       SS N+
Sbjct: 178 REEDGLAYSSRNV 190


>gi|212638968|ref|YP_002315488.1| pantoate--beta-alanine ligase [Anoxybacillus flavithermus WK1]
 gi|212560448|gb|ACJ33503.1| Panthothenate synthetase [Anoxybacillus flavithermus WK1]
          Length = 292

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 59/187 (31%), Gaps = 27/187 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +LE+A K  +   I VLS   +P     +             
Sbjct: 35  GFVPTMGY---LHEGHVALLERARKEND---IVVLSIFVNPLQFGPNEDFDRYPRDFERD 88

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK-----------------TV 121
            KI E+ G   +     T    +  +        V+ L  K                  +
Sbjct: 89  YKIAERAGVDIIFYPSVTEMYPHEPSVTVKVHERVDVLCGKSRPGHFDGVATVVTKLFHI 148

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +   +  FG   A    ++      + F    V +  +R +     SS N+   L++   
Sbjct: 149 VMPHRAYFGLKDAQQVAVIDGLIRDFHFPIELVAVPTVREDDGLAKSSRNV--YLSEQER 206

Query: 180 LNAAHLL 186
             A  L 
Sbjct: 207 QEAPALY 213


>gi|84495006|ref|ZP_00994125.1| putative pantoate--beta-alanine ligase [Janibacter sp. HTCC2649]
 gi|84384499|gb|EAQ00379.1| putative pantoate--beta-alanine ligase [Janibacter sp. HTCC2649]
          Length = 315

 Score = 41.7 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 28/186 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  +L +A   A      +L+   +P                    +
Sbjct: 38  VMTMG---ALHEGHAQLLREARASAE---YVILTIFLNPLQFGPKEDLSRYPRTFDDDMR 91

Query: 81  ILEKMGFSAL------IRYKFTLETANYSAEQFIQKVLVEWL------------EVKTVI 122
           I    G   +      + Y         SA      +  +              ++  + 
Sbjct: 92  IATAAGVDIVFAPTPDVVYPDGDPGVRISAGPLGDVLEGKSRPGHFDGMLTVVAKLLHLT 151

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            G++  FG+  A    ++++   +  F    V +  +R +    +SS N  T LT+    
Sbjct: 152 GGSRALFGQKDAQQLLLIRRMVRELDFPVEVVSVPTVREDDGLALSSRN--TYLTESDRE 209

Query: 181 NAAHLL 186
            A  L 
Sbjct: 210 VALCLS 215


>gi|161529002|ref|YP_001582828.1| cytidyltransferase-like protein [Nitrosopumilus maritimus SCM1]
 gi|160340303|gb|ABX13390.1| cytidyltransferase-related domain [Nitrosopumilus maritimus SCM1]
          Length = 158

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 16/149 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH  +L  A +I++   I  L+ +                +    +   L +
Sbjct: 11  GTFDIIHRGHITLLSSAFEISDKVIIG-LTSDE-----FAKKRGKTLSNNYEKRLANLTE 64

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR-GILQKR 143
                 I  +F   +   S         V   EV+ ++   +        GD    L+ +
Sbjct: 65  T-----IFKEFPKSSFQISKLDNDFGPAVLEPEVQALVVSDETS----SQGDVLNDLRAK 115

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                   + +          +S++ I+ 
Sbjct: 116 KNLSPVEVITVPMHLAKDGSRISTTRIKN 144


>gi|330685763|gb|EGG97398.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis VCU121]
          Length = 132

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +    + ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQVKNKKSYYDYNQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E     +++ VE  +V   + G  +       G+ 
Sbjct: 58  MLESIRYVDLVI------------PEDGWGQKELDVERFDVDVFVMGHDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ + E           +  N+++ +S++ I+  L    
Sbjct: 100 DFLKDKCEV----------IYLNRTEGISTTKIKQELYGKD 130


>gi|258620842|ref|ZP_05715876.1| protein hldE [Vibrio mimicus VM573]
 gi|258586230|gb|EEW10945.1| protein hldE [Vibrio mimicus VM573]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|73663387|ref|YP_302168.1| teichoic acid biosynthesis protein [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495902|dbj|BAE19223.1| teichoic acid biosynthesis protein [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 132

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 58/155 (37%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNRIKNKKSYYNFEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I            +    +++ V+  EV T + G  +       G+   
Sbjct: 58  MLESIRYVDLVIP----------ESGWGQKEIDVDRYEVDTFVMGHDW------EGEFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+ + E           +  N+++ +S++ I+  L
Sbjct: 102 LKDKCEV----------IYLNRTEGISTTKIKKEL 126


>gi|13542046|ref|NP_111734.1| cytidylyltransferase [Thermoplasma volcanium GSS1]
 gi|74575334|sp|Q979C2|RIBL_THEVO RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|14325477|dbj|BAB60381.1| lipopolysaccharide core biosynthesis protein [Thermoplasma
           volcanium GSS1]
          Length = 142

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 23/156 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +HLGH   L+++ K+ +   + V       R     ++    +   + +  
Sbjct: 4   VMATGVFDILHLGHIHYLKESKKLGDELVVVV------ARDSTARNNGKIPIFDENSRLA 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++ ++                +  +     + V+      +  G   +F      D   L
Sbjct: 58  LISELKVV-------DRAILGHEGDMMKTVIEVK---PDIITLGYDQKF------DEAEL 101

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           Q +  K G     +  +     Q+ SSS++R  + +
Sbjct: 102 QSKINKLGITVKIV-RISKYDGQLNSSSSVRKKIME 136


>gi|254227092|ref|ZP_04920646.1| sugar kinase, pfkB family [Vibrio cholerae V51]
 gi|125620379|gb|EAZ48759.1| sugar kinase, pfkB family [Vibrio cholerae V51]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|146096338|ref|XP_001467774.1| ethanolamine-phosphate cytidylyltransferase [Leishmania infantum
           JPCM5]
 gi|134072140|emb|CAM70841.1| ethanolamine-phosphate cytidylyltransferase [Leishmania infantum
           JPCM5]
 gi|322501743|emb|CBZ36825.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 402

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 5   HNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           +++   +++P  + G V     G FD +H GH   L QA ++ +   +   S       +
Sbjct: 35  YSLFCTEAIPPKVPGTVRIWVDGCFDMLHFGHANALRQARRLGDELFVGCHSDE----EV 90

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++   P   +     + + L        ++         NY     ++   VE LE+  V
Sbjct: 91  MRFKGPP--IMHAEERYEALRACKWVDYVVE--------NYPYCTRLKD--VERLEIDYV 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           + G       +        Q+  +   F  V
Sbjct: 139 VHGDDISVDLNGRNS---YQEIIDAGKFKVV 166



 Score = 36.7 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 17/117 (14%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           N S P      V   G+FD  H+GH  +L++A ++ +     V       + + +     
Sbjct: 223 NNSSPKSGDRIVYVDGSFDLFHIGHIRVLQKARELGDYVIAGVYED----QVVNEHKGKN 278

Query: 70  FTLSPPSIQEK-ILEKMGFSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           + +   + +   +L       ++    F            + K +++ L +  V+ G
Sbjct: 279 YPIMNLNERVLGVLSCRYVDEVVMGVPFD-----------VSKDVIDGLHINVVVGG 324


>gi|117618061|ref|YP_858215.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|150383464|sp|A0KPL4|HLDE_AERHH RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|117559468|gb|ABK36416.1| bifunctional protein HldE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 475

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A K+ +   + V + +   R +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNT-DESVRRLKGPGRPV---NPTERRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++        A  + ++ I +VL + L     + G  ++
Sbjct: 399 VLAALGAVDWVVP------FAEDTPQRLIAEVLPDLL-----VKGGDYK 436


>gi|114800169|ref|YP_760503.1| rfaE bifunctional protein [Hyphomonas neptunium ATCC 15444]
 gi|123128784|sp|Q0C190|HLDE_HYPNA RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|114740343|gb|ABI78468.1| rfaE bifunctional protein [Hyphomonas neptunium ATCC 15444]
          Length = 486

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 27/147 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  ++EQA    +   + + S N    ++ +   P+  ++    +  +L  
Sbjct: 358 GCFDILHPGHIRVIEQARAHCDRLVVGLNSDN----SVKRLKGPLRPINNEQARADVLSA 413

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I +         +    I       L    ++ G  +     R    G     
Sbjct: 414 LSAVDGVIIFDTD------TPLDAIA-----ALNPDVLVKGGDYT----RESIVG--ADI 456

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI 170
            E  G   V +  +  +     S++ I
Sbjct: 457 VEARGGEIVIVPLVAGH-----STTAI 478


>gi|121591261|ref|ZP_01678558.1| sugar kinase, pfkB family [Vibrio cholerae 2740-80]
 gi|153803495|ref|ZP_01958081.1| sugar kinase, pfkB family [Vibrio cholerae MZO-3]
 gi|153820194|ref|ZP_01972861.1| sugar kinase, pfkB family [Vibrio cholerae NCTC 8457]
 gi|227082558|ref|YP_002811109.1| sugar kinase, pfkB family [Vibrio cholerae M66-2]
 gi|254849561|ref|ZP_05238911.1| sugar kinase [Vibrio cholerae MO10]
 gi|255746891|ref|ZP_05420836.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholera CIRS 101]
 gi|262147214|ref|ZP_06028017.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae INDRE 91/1]
 gi|298500205|ref|ZP_07010010.1| sugar kinase [Vibrio cholerae MAK 757]
 gi|254802024|sp|C3LQY0|HLDE_VIBCM RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|121546884|gb|EAX57040.1| sugar kinase, pfkB family [Vibrio cholerae 2740-80]
 gi|124120971|gb|EAY39714.1| sugar kinase, pfkB family [Vibrio cholerae MZO-3]
 gi|126509264|gb|EAZ71858.1| sugar kinase, pfkB family [Vibrio cholerae NCTC 8457]
 gi|227010446|gb|ACP06658.1| sugar kinase, pfkB family [Vibrio cholerae M66-2]
 gi|254845266|gb|EET23680.1| sugar kinase [Vibrio cholerae MO10]
 gi|255735293|gb|EET90693.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholera CIRS 101]
 gi|262031345|gb|EEY49956.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae INDRE 91/1]
 gi|297540898|gb|EFH76952.1| sugar kinase [Vibrio cholerae MAK 757]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|229521264|ref|ZP_04410684.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae TM 11079-80]
 gi|229341796|gb|EEO06798.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae TM 11079-80]
          Length = 286

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 139 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 197

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 198 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 243

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 244 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 281


>gi|327484929|gb|AEA79336.1| ADP-heptose synthase [Vibrio cholerae LMA3894-4]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|148979393|ref|ZP_01815499.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrionales bacterium SWAT-3]
 gi|145961829|gb|EDK27122.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrionales bacterium SWAT-3]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   +  A ++ +   + V + +   + +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYMNHAAELGDRLIVAVNT-DESVKRLKGPGRPV---NPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  ++  ++ AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSILVKGGDYK-PEEIAGGAEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTEIIKAI 471


>gi|326328765|ref|ZP_08195101.1| pantoate--beta-alanine ligase [Nocardioidaceae bacterium Broad-1]
 gi|325953387|gb|EGD45391.1| pantoate--beta-alanine ligase [Nocardioidaceae bacterium Broad-1]
          Length = 289

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 8/82 (9%)

Query: 14 PNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
          P    G VV     +G    +H GH  ++  A +     P+ V  F   P          
Sbjct: 18 PARRDGAVVGFVPTMG---ALHEGHASLMRVARERVGGGPVVVSIFVN-PLQFGAGEDLD 73

Query: 70 FTLSPPSIQEKILEKMGFSALI 91
                    ++ E+ G   + 
Sbjct: 74 RYPRTLEADLEVCEREGVDVVF 95


>gi|300113453|ref|YP_003760028.1| pantoate/beta-alanine ligase [Nitrosococcus watsonii C-113]
 gi|299539390|gb|ADJ27707.1| pantoate/beta-alanine ligase [Nitrosococcus watsonii C-113]
          Length = 283

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 45/219 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   +   ++     +        V  +GN   +H GH  ++E+A ++A+     ++S
Sbjct: 1   MRVLRTVAAVRTTVEDWRASRERVALVPTMGN---LHKGHLALVERAAQLADR---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                   ++ L + G + +    F     +   ++      VE
Sbjct: 55  IFVNPLQFNDQDDYSRYPRTFKKDQQYLAEYGVAMV----FAPSLEDIYPQRLESVTQVE 110

Query: 115 WLEVKTVITGTKFRFGKDR------AGDRGILQKRGEKYG-------------------- 148
              +  ++ G   R G  R      A    I+Q +   +G                    
Sbjct: 111 VPGLSDILEGA-SRLGHFRGVTTVVAALFNIIQPQVAVFGEKDYQQLLIIRRMVADLVMP 169

Query: 149 FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
                I  +R+     +SS N    LT+     A  L G
Sbjct: 170 VEVESIATVRDKDGLALSSRN--NYLTQEERTRAPILFG 206


>gi|262166476|ref|ZP_06034213.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio mimicus VM223]
 gi|262170617|ref|ZP_06038295.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio mimicus MB-451]
 gi|261891693|gb|EEY37679.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio mimicus MB-451]
 gi|262026192|gb|EEY44860.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio mimicus VM223]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|171057862|ref|YP_001790211.1| pantoate--beta-alanine ligase [Leptothrix cholodnii SP-6]
 gi|238689111|sp|B1Y4K7|PANC_LEPCP RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|170775307|gb|ACB33446.1| pantoate--beta-alanine ligase [Leptothrix cholodnii SP-6]
          Length = 286

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 27/118 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAI------GNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H +   ++    ++     I      GN   +H GH  ++ QA +    +   V S
Sbjct: 1   MQIVHTLADLRAALAPVRRSAGTIAFVPTMGN---LHEGHLALVRQARERVGAAGTVVAS 57

Query: 55  -------FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE 105
                  F PH                 +   ++L   G   +    F    A    +
Sbjct: 58  IFVNRLQFAPH-------EDFDRYPRTLARDAELLAPAGCDLV----FAPAEAELYPQ 104


>gi|56310585|emb|CAG30791.1| CapZA protein [Neisseria meningitidis]
          Length = 132

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 33/158 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A  + ++  + + +                   P   +  
Sbjct: 4   VLTYGTFDLLHYGHIRLLERAKALGDHLTVAISTDE------FNLGKGKVCAYPYPERAF 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +     +I           S EQ I+   V+   +   + G  +      AG    
Sbjct: 58  IVNAIQYVDKVIP--------ETSWEQKIKD--VQENNIDIFVMGDDW------AGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           L+   E           +  ++++ +S++  + AL+  
Sbjct: 102 LKDYCEV----------VYLHRTEGISTTQTKEALSSK 129


>gi|308126555|ref|ZP_07663814.1| bifunctional protein HldE [Vibrio parahaemolyticus AQ4037]
 gi|308109775|gb|EFO47315.1| bifunctional protein HldE [Vibrio parahaemolyticus AQ4037]
          Length = 281

 Score = 41.7 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 134 IEAVKKARARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 192

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 193 RPV---NPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSMLVKGG 238

Query: 126 KFR 128
            ++
Sbjct: 239 DYK 241


>gi|330448759|ref|ZP_08312406.1| rfaE bifunctional protein, domain I [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492950|dbj|GAA06903.1| rfaE bifunctional protein, domain I [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V S +   + +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLTEAAKLGDRLIVAVNS-DSSVKELKGPGRPV---NPEDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   FT      + ++ I +VL        ++ G  ++  +D AG + +
Sbjct: 399 VLAGLGAVDWVV--PFTE----QTPQRLISEVL-----PSILVKGGDYK-PEDIAGGKEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G   + +     N     S++ I  A+
Sbjct: 447 IAA-----GGQVLVL-----NFEDGCSTTKIIEAI 471


>gi|256823763|ref|YP_003147726.1| cytidyltransferase-like domain-containing protein [Kangiella
           koreensis DSM 16069]
 gi|256797302|gb|ACV27958.1| cytidyltransferase-related domain protein [Kangiella koreensis DSM
           16069]
          Length = 132

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 28/129 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H+GH  ILE+A  +     + V    L+F              + +    
Sbjct: 3   VITFGTFDVFHVGHVNILERARAMGTELYVGVSSDQLNFE---------KKGRYPIYSQE 53

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  IL      AL    FT    +   +       ++  +   ++ G  +       G 
Sbjct: 54  DRMHILS-----ALTCVDFTFIEESLEKKAE----YIQKYQADLLVMGDDW------QGK 98

Query: 137 RGILQKRGE 145
              +++  E
Sbjct: 99  FDEMKQFCE 107


>gi|332142882|ref|YP_004428620.1| pantothenate synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143073|ref|YP_004428811.1| pantothenate synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693272|sp|B4RYN9|PANC_ALTMD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|327552904|gb|AEA99622.1| pantothenate synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553095|gb|AEA99813.1| pantothenate synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 282

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V  +I   +   N  +      G V  +GN   +H GH  ++++A    +N    V+S
Sbjct: 1   MKVIDSISTLRQTVNAWRRNGESVGFVPTMGN---LHDGHLKLVKKAKAHNDN---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +             +  L  +G  A+    F    A         +  VE
Sbjct: 55  IFVNPMQFGANEDLDAYPRTIEEDKAKLISVGADAV----FLPSVAEMYPAGLDAQTFVE 110

Query: 115 WLEVKTVITGTKFRFGKDRAGDR 137
              +           G  R G  
Sbjct: 111 VPGIS------DSHCGASRPGHF 127


>gi|313622974|gb|EFR93272.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
          Length = 391

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHQLHLNKARELTKSDVVIAVMS-----GSFVQRGEPA--IIPKWERTKMALAAGID 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +I     F  + A   AE+ I+ +  + L + T+  G++    +D +     + +    
Sbjct: 66  MVIELPVSFATQHATIFAEESIRLL--DALRIDTLFFGSEHGVSEDFSTAAKTVVENEAA 123

Query: 147 YG 148
           + 
Sbjct: 124 FN 125


>gi|323499436|ref|ZP_08104408.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio sinaloensis DSM 21326]
 gi|323315492|gb|EGA68531.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio sinaloensis DSM 21326]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F  +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFGED----TPQRLISEVLPDML-----VKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|269960209|ref|ZP_06174584.1| protein hldE [Vibrio harveyi 1DA3]
 gi|269835016|gb|EEZ89100.1| protein hldE [Vibrio harveyi 1DA3]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 51/123 (41%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +    ++ +  
Sbjct: 329 IEAVKKARAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNTDD----SVKRLK 384

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   ++P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 385 GPGRPVNPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|167756764|ref|ZP_02428891.1| hypothetical protein CLORAM_02311 [Clostridium ramosum DSM 1402]
 gi|237734482|ref|ZP_04564963.1| glycerol-3-phosphate cytidylyltransferase [Mollicutes bacterium D7]
 gi|167702939|gb|EDS17518.1| hypothetical protein CLORAM_02311 [Clostridium ramosum DSM 1402]
 gi|229382302|gb|EEO32393.1| glycerol-3-phosphate cytidylyltransferase [Coprobacillus sp. D7]
          Length = 131

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 31/156 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  I+++A  + +   + V            +            ++ 
Sbjct: 7   VITYGTFDLFHVGHLNIIKRAKALGDYLIVAV------SSDAFNAQKGKKAYHSDHDRKL 60

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ILE      +    F       S +Q I+   V+  +V   + G  +       G    L
Sbjct: 61  ILEA--IRYVDEVIFEE-----SWDQKIKD--VQEHDVDVFVMGDDW------EGKFDFL 105

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +          V++      ++  +S++ I+  L K
Sbjct: 106 KDYC-----EVVYLP-----RTDGISTTKIKDDLHK 131


>gi|323491173|ref|ZP_08096359.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio brasiliensis LMG 20546]
 gi|323314541|gb|EGA67619.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio brasiliensis LMG 20546]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F  +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFGED----TPQRLISEVLPDLL-----VKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|209696084|ref|YP_002264014.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Aliivibrio salmonicida LFI1238]
 gi|226702241|sp|B6ELZ7|HLDE_ALISL RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|208010037|emb|CAQ80360.1| bifunctional protein HldE [Aliivibrio salmonicida LFI1238]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V + N   + +     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVYYLNHAAELGDRLIVAVNT-NESVQRLKGPGRP---INPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  +   KD AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISEVL-----PTLLVKGGDYEI-KDIAGGAEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTGIIEAI 471


>gi|121534604|ref|ZP_01666426.1| citrate lyase ligase [Thermosinus carboxydivorans Nor1]
 gi|121306856|gb|EAX47776.1| citrate lyase ligase [Thermosinus carboxydivorans Nor1]
          Length = 349

 Score = 41.7 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 36/175 (20%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA-- 89
           LGH  ++  A     N+ + VL        ++     +F   P  ++ +++ +       
Sbjct: 162 LGHKAVI--AKAAQENAAVVVL--------VVSEDRSLF---PFDVRLRLVREGLADYQN 208

Query: 90  LIRYK--------------FT---LETANYSAEQF--IQKVLVEWLEVKTVITGTKFRFG 130
           ++                 FT      A  +        + +   LEV     G +    
Sbjct: 209 ILVLPGGKYIVSAATFPGYFTRGEETVAAQTRLDATIFARYIAPALEVTVRYVGDEPYCP 268

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             RA +   + +   +YG     +  +      IVS+S +R  + + +    + L
Sbjct: 269 VTRAYN-EAMAEILPQYGIAFKVMPRIAV-GGTIVSASRVRELIRQDNWEEISKL 321


>gi|307330156|ref|ZP_07609305.1| RfaE bifunctional protein [Streptomyces violaceusniger Tu 4113]
 gi|306884176|gb|EFN15213.1| RfaE bifunctional protein [Streptomyces violaceusniger Tu 4113]
          Length = 479

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +L+ A +  +   + V        ++ +   P   ++P +
Sbjct: 328 GGTVVAAGGCFDLLHAGHVGLLQNARRTGDCLIVCV----NSDASVTRLKGPGRPINPVA 383

Query: 77  IQEKILEKMG-FSALIRYKFTLE-----TANYSAEQFIQ 109
            + ++L  +G   A+    F  +           + +++
Sbjct: 384 DRVRVLAGLGCVDAVAV--FDEDTPEPLLRRLRPDVWVK 420


>gi|315585997|gb|ADU40378.1| pantoate--beta-alanine ligase [Helicobacter pylori 35A]
          Length = 276

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 35/232 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL- 116
           +P     +        P      + E++G +A+     T E   Y  EQ ++    E+L 
Sbjct: 55  NPTQFGPNEDFSAYPCPLEKDLALCEELGVNAVF-LPKTGEMYPYEIEQRLKLYAPEFLS 113

Query: 117 -------------EVKTVITGT-------KFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156
                         V  V+          +  FGK  A    I+Q   +           
Sbjct: 114 SSLEGAVREGHFDGVVQVVLKFFHLVHPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPC 173

Query: 157 --LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
             +R++ +  +SS N+   L       A  +     +I+  +  GEK    L
Sbjct: 174 EIVRDDDNLALSSRNV--YLDATQRKQALAIPKALESIKQAIDKGEKACEKL 223


>gi|291486141|dbj|BAI87216.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 131

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 55/159 (34%), Gaps = 37/159 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 6   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKAYHSYEHRKL 59

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE--VKTVITGTKFRFGKDRAGDR 137
           ILE +     +I             E+   + + + +   +   + G  +       G  
Sbjct: 60  ILETIRYVDEVI------------PEKNWDQKVQDVINHDIDVFVMGDDW------EGKF 101

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             L+   +      V++      +++ +S++ I+  +  
Sbjct: 102 DFLKDYCK-----VVYLP-----RTEGISTTKIKEEIAN 130


>gi|240102331|ref|YP_002958639.1| phosphopantetheine adenylyltransferase [Thermococcus gammatolerans
           EJ3]
 gi|259491325|sp|C5A3G3|COAD_THEGJ RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|239909884|gb|ACS32775.1| Phosphopantetheine adenylyltransferase (coaD) [Thermococcus
           gammatolerans EJ3]
          Length = 159

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     +  L+ +   R    +   +          K
Sbjct: 8   VVVGGTFDRLHLGHKALLRKAFEVGRYVYVG-LTSDEMIRNKPYAEKILPYELRLMDLLK 66

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK---DRAGDR 137
             E  G++     K        +A  F  ++      ++ ++   +   G    +RA + 
Sbjct: 67  FFEVNGYTNYRIIKIN------TAIGFADRIKS----LEAIVVSEETYKGALLVNRAREE 116

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             L+          V I  +++     +SS+ IR  L  
Sbjct: 117 RGLKPL------EIVTIKLVKSRIGPKISSTLIRAGLID 149


>gi|223038775|ref|ZP_03609067.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter rectus RM3267]
 gi|222879748|gb|EEF14837.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter rectus RM3267]
          Length = 190

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 58/171 (33%), Gaps = 35/171 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SF-NPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+FD  HLGH   ++ A++  +   + ++ +F +P         S    L     + K  
Sbjct: 8   GSFDPPHLGHDAAIKAALERLDADKLIIMPTFISPFKSEF----SAPPLL-----RLKWA 58

Query: 83  -EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--------TVITGTKFRFGKDR 133
            E  G  A +      E A       IQ V      ++         +I G       D+
Sbjct: 59  NEAWGALAKVCVS-DYEIAQNRPVPTIQSVR----HMRQIYGECEIYLIVGADHLASLDK 113

Query: 134 AGDRGILQKRGEKYGFHT-----VFIDE--LRNNKSQIVSSSNIRTALTKG 177
             +   L +      F       V + E     N +  VSSS IR  L K 
Sbjct: 114 WHEIDELFRLA---TFVVASRDDVAVPENFKILNINAPVSSSQIRQNLDKS 161


>gi|294782408|ref|ZP_06747734.1| hypothetical protein
 gi|294481049|gb|EFG28824.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 348

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 62/167 (37%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +S     + I+  
Sbjct: 159 LGHQYLVEKAANENDILHLFIVSDDSSLVPFKVRKKLVIEGTKHLKNISYHETGDYIISS 218

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +  + + L +     G +         ++ 
Sbjct: 219 ATFPSYFQKDEVAVI---ESQANLDIEIFTK--IAKSLNINRRYVGEEPNSLVTNIYNQT 273

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      V +   + +    +S+S IR  +  G++ +  +L
Sbjct: 274 MLKKLPE-NNIECVVVPRKKYSDKV-ISASTIRQIIKNGNLEDLKNL 318


>gi|312135415|ref|YP_004002753.1| glycerol-3-phosphate cytidylyltransferase [Caldicellulosiruptor
           owensensis OL]
 gi|311775466|gb|ADQ04953.1| glycerol-3-phosphate cytidylyltransferase [Caldicellulosiruptor
           owensensis OL]
          Length = 129

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 57/157 (36%), Gaps = 31/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH L L++A  + +   + + +                +      +++
Sbjct: 4   VITYGTFDLLHYGHLLFLKRAKSLGDYLIVGLSTDE------FNEVKGKKSYFKFEQRKE 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            L+ + +  LI  +        S EQ +  ++    ++   + G  +       G    L
Sbjct: 58  FLQAIKYVDLIIPE-------NSWEQKVDDII--KYKIDIFVIGEDWM------GKFDYL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +         V++      ++ I+SS+ ++  +   
Sbjct: 103 SEYC-----EVVYLP-----RTPIISSTILKNLIDNC 129


>gi|238755497|ref|ZP_04616836.1| Transcriptional regulator nadR [Yersinia ruckeri ATCC 29473]
 gi|238706253|gb|EEP98631.1| Transcriptional regulator nadR [Yersinia ruckeri ATCC 29473]
          Length = 429

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSALIRYK-FTLETANYSAEQF--IQKVLVEWLEVKTVITGTKFR 128
            +       +L+   +   IR   F           +      + E++  K ++    + 
Sbjct: 118 PTVSDRLRWLLQTFKYQKNIRIHSFDEHGIEPYPHGWDVWSHGVKEFMANKGIVPSFIY- 176

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                +GD     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 177 -----SGDSQDAPRYREQLGIETILIDPQRSF--MEISGRQIRR 213


>gi|296314662|ref|ZP_06864603.1| pantoate--beta-alanine ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838574|gb|EFH22512.1| pantoate--beta-alanine ligase [Neisseria polysaccharea ATCC 43768]
          Length = 278

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIQELRAWRKNAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  ++ +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGIAVVFAPDEKELYPNVEQRYNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       +++   E   F      +D  R
Sbjct: 115 GKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    L+      A  L 
Sbjct: 175 AEDGLALSSRN--RYLSAAERAEAPRLY 200


>gi|256821779|ref|YP_003145742.1| rfaE bifunctional protein [Kangiella koreensis DSM 16069]
 gi|256795318|gb|ACV25974.1| rfaE bifunctional protein [Kangiella koreensis DSM 16069]
          Length = 487

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 41/172 (23%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE+ Q      +  V+  G FD +H GH   L+QA  + +   + V              
Sbjct: 343 IELIQHSKASGETLVMTNGCFDILHAGHVAYLKQAAALGDRLIVAV-----------NGD 391

Query: 67  SPIFTL-------SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             +  L       +P   + ++L  +     ++      E +  +  + I + L + L  
Sbjct: 392 DSVRRLKGEGRPVNPVDQRMEVLAGLASVDWVV------EFSEDTPARLIGECLPDLL-- 443

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
              + G  ++  +   GD  +      K G   + +D +       VS++ I
Sbjct: 444 ---VKGGDYKPDQIAGGDAVM------KNGGQVIILDFV-----DGVSTTKI 481


>gi|298529568|ref|ZP_07016971.1| pantoate/beta-alanine ligase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511004|gb|EFI34907.1| pantoate/beta-alanine ligase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 281

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 52/208 (25%), Gaps = 44/208 (21%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   H+      +P         +G F   H GH  ++  A +  +   + V+S   +P 
Sbjct: 15  MQARHSGRTLALVP--------TMGYF---HQGHLSLMRWAREYCD---LLVVSLFVNPA 60

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL---- 116
                                  + G   L    FT    +   E +   V VE +    
Sbjct: 61  QFGAGEDYQHYPRDLDSDVTAASEEGVDIL----FTPGQGSLYPEDYATWVEVEGMSGKL 116

Query: 117 ----------EVKTVITG-TKFRFGKDRAGDRGILQKRG------EKYGFHTVFI--DEL 157
                      V TV+               +   Q+                 +    +
Sbjct: 117 CGRSRPEHFRGVATVVCKLFNLTCPHKAVFGQKDWQQLIIIRKMARDLNIPVEVVGRPIV 176

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           R      +SS   R A        AA +
Sbjct: 177 RQEDGLAMSS---RNAYLDREQRKAAPM 201


>gi|328947453|ref|YP_004364790.1| glycerol-3-phosphate cytidylyltransferase [Treponema succinifaciens
           DSM 2489]
 gi|328948201|ref|YP_004365538.1| glycerol-3-phosphate cytidylyltransferase [Treponema succinifaciens
           DSM 2489]
 gi|328447777|gb|AEB13493.1| glycerol-3-phosphate cytidylyltransferase [Treponema succinifaciens
           DSM 2489]
 gi|328448525|gb|AEB14241.1| glycerol-3-phosphate cytidylyltransferase [Treponema succinifaciens
           DSM 2489]
          Length = 130

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 42/162 (25%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FN---PHPRTIIQSSSPIFTLSPP 75
           ++  G FD +H GH  +L +A  + +   + + +  FN    H +           L   
Sbjct: 4   IITYGTFDLLHYGHINLLRRAKSLGDYLVVGLSTDEFNWNSKHKKCYFSYEKRKQLLEAI 63

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRA 134
                         +I             E + QK   VE  ++ T + G  ++      
Sbjct: 64  RY---------VDLVI-----------PEENWEQKKSDVELYKIDTFVIGDDWK------ 97

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           G    L+++ E           +   ++  +S++ I+  L K
Sbjct: 98  GKFDFLKEQCEV----------VYLERTPEISTTQIKRDLEK 129


>gi|325977378|ref|YP_004287094.1| pantoate--beta-alanine ligase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177306|emb|CBZ47350.1| pantoate--beta-alanine ligase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 280

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H +E  +      K      G V  +G    +H GH  ++++A+   N+  ++V  
Sbjct: 1   MKIVHTVEDVRKAVQAWKADGKSIGLVPTMGY---LHEGHKSLIDKAVAENNHVVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              ++ E  G S +    F  E ++  +  F   + + 
Sbjct: 58  ---NPIQFAPTEDLESYPRDLEQDARLCEAAGASLI----FNPEPSDMYSPTFSSFIDMS 110

Query: 115 WL-----------EVKTV--ITGTKF--------RFGKDRAGDRGILQKRGEKYGFHTVF 153
            L             + V  + G  F         FG+  A    +++   +   F+   
Sbjct: 111 TLTQGLCGKTRPIHFRGVCTVVGKLFNIVEPNRAYFGQKDAQQLAVIKHMVDDLNFNLEI 170

Query: 154 I--DELRNNKSQIVSS 167
           I    +R       SS
Sbjct: 171 IGCPIVRETDGLAKSS 186


>gi|312879646|ref|ZP_07739446.1| cytidyltransferase-related domain protein [Aminomonas paucivorans
           DSM 12260]
 gi|310782937|gb|EFQ23335.1| cytidyltransferase-related domain protein [Aminomonas paucivorans
           DSM 12260]
          Length = 491

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
               G FD +H GH   L +A +  +   + V        ++     P   L P   +  
Sbjct: 358 AATNGCFDALHGGHLFSLGEARRQGDRLVVAV----NSDASVRGLKGPTRPLFPLRERVA 413

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +      +   F       S E   +      L    ++ G ++R
Sbjct: 414 LLSALEMVD--LVVPFDEP----SPETLYRS-----LRPHVLVKGEEYR 451


>gi|258652523|ref|YP_003201679.1| pantoate/beta-alanine ligase [Nakamurella multipartita DSM 44233]
 gi|258555748|gb|ACV78690.1| pantoate/beta-alanine ligase [Nakamurella multipartita DSM 44233]
          Length = 284

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 34/222 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGG-----VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +   +   + L    +G      V  +G    +H GH  +  +A    +   + V+S 
Sbjct: 1   MKIVRTVPDLRELLRPYRGEGSVGFVPTMG---ALHEGHLELARRARAADD---VVVMSI 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYK--FTLETAN----YS 103
             +P      +             ++    G   L        Y   FT   +       
Sbjct: 55  FVNPTQFNDPADLAAYPRDEHKDAELAASAGVDVLFAPGVAEVYPPGFTATVSLHGPIVE 114

Query: 104 AEQFIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFI 154
           A +   + +  +  V TV+             FG+  A    +++            V +
Sbjct: 115 ALEGAHRGVGHFQGVTTVVSKLFGMVSPDRAYFGQKDAQQVRVVRAMVADLNIPTEIVVV 174

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDV 196
             +R      +SS N R  L+      AAH+    +  E  V
Sbjct: 175 PTVREPDGMAMSSRNRR--LSPFERARAAHISAALWEAEVAV 214


>gi|215489390|ref|YP_002331821.1| NadR-like protein [Escherichia coli O127:H6 str. E2348/69]
 gi|300992972|ref|ZP_07180127.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 45-1]
 gi|301047009|ref|ZP_07194118.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 185-1]
 gi|215267462|emb|CAS11916.1| NadR-like protein [Escherichia coli O127:H6 str. E2348/69]
 gi|300301054|gb|EFJ57439.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 185-1]
 gi|300406746|gb|EFJ90284.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 45-1]
 gi|315291548|gb|EFU50908.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 153-1]
          Length = 334

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 66/235 (28%), Gaps = 43/235 (18%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + I  
Sbjct: 8   LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRFPQATILV 67

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 68  LTP-----ELVARYNLPAIPHNDADADI----HRHYVATLCLQILRCRPHAVFTAEDYGD 118

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G               ++      +   R    +  S + IR+ + +   + A  +    
Sbjct: 119 GFANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSF 170

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
                 +        TL              L +G   VY   F        +G+
Sbjct: 171 VRRICLLGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 214


>gi|26250842|ref|NP_756882.1| NadR-like protein [Escherichia coli CFT073]
 gi|227886934|ref|ZP_04004739.1| NadR family protein [Escherichia coli 83972]
 gi|26111273|gb|AAN83456.1|AE016770_256 NadR homolog [Escherichia coli CFT073]
 gi|227836075|gb|EEJ46541.1| NadR family protein [Escherichia coli 83972]
          Length = 342

 Score = 41.7 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 66/235 (28%), Gaps = 43/235 (18%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + I  
Sbjct: 16  LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRFPQATILV 75

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 76  LTP-----ELVARYNLPAIPHNDADADI----HRHYVATLCLQILRCRPHAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G               ++      +   R    +  S + IR+ + +   + A  +    
Sbjct: 127 GFANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSF 178

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
                 +        TL              L +G   VY   F        +G+
Sbjct: 179 VRRICLLGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 222


>gi|306820307|ref|ZP_07453946.1| pantoate-beta-alanine ligase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551636|gb|EFM39588.1| pantoate-beta-alanine ligase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 279

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 83/248 (33%), Gaps = 38/248 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I+  +SL    K      G V  +G    +H GH  ++++A +  +   I V+S
Sbjct: 1   MKVIKKIDELRSLLQGYKNEGKTIGLVPTMGY---LHRGHASLIQRAAQEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQE--KILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
              +P      +  + T  P  I+   K+ E+ G   +   +      + SA   I+ + 
Sbjct: 55  DFVNPIQ-FGPNEDLAT-YPRDIEADTKLAEEAGGDFIFHPEVEEMYQDKSAFVDIEFMS 112

Query: 113 VEWLEVKTV---------------ITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
                +K                 I G     FG+  A    I++K      F    I  
Sbjct: 113 ENLCGLKRPGHFRGVCTVCTKLFNIVGPNRAYFGQKDAQQLAIIKKLVFDLNFPIEIIAC 172

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQ 214
             +R      +SS   R          AA L   +   + + +  E    +      N  
Sbjct: 173 PIIREEDGLALSS---RNTYLSADERKAA-LCLSKAIFQGEKLAKEGKDLSEVLSKMNEI 228

Query: 215 LSPDILLK 222
           +S + L K
Sbjct: 229 ISSEPLAK 236


>gi|296395163|ref|YP_003660047.1| pantetheine-phosphate adenylyltransferase [Segniliparus rotundus
           DSM 44985]
 gi|296182310|gb|ADG99216.1| pantetheine-phosphate adenylyltransferase [Segniliparus rotundus
           DSM 44985]
          Length = 160

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 35/154 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD I LGH  ++ +A K  +   + V++ NP  +T+  S            + +++ +
Sbjct: 8   GTFDPITLGHLDVIGRAAKHFDRLTVVVMT-NPKKQTLFSSD----------ERMELIRE 56

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLV--EWLEVKTVITG----TKFRFGKDRAGDRG 138
                      T   A+   E +   ++   +   VK ++ G      F +         
Sbjct: 57  A----------TASFAHVDVEAWEGLLVSGAKRRGVKAIVKGLRTSIDFEY---EIAMAQ 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +     E   F      E        +SSS I+ 
Sbjct: 104 MNHHLAEVDTFFVATSPEFS-----YISSSLIKE 132


>gi|315427030|dbj|BAJ48647.1| glycerol-3-phosphate cytidylyltransferase [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428110|dbj|BAJ49697.1| glycerol-3-phosphate cytidylyltransferase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 151

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 24/155 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKI--ANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
             V+  G FD +HLGH L+L+ A K+       + V++ +      ++ +     +    
Sbjct: 4   RTVLTTGAFDILHLGHMLMLKDAKKLAGPRGKLVVVVASD----KTVRRNKGRAPIFGAR 59

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++K+L+ +     ++     +            + ++  +    V  G        R  
Sbjct: 60  ERKKMLQFLKPVDEVLIGYDPVSF----------EKILRKVRPDIVAFGYD-----QRKI 104

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
               L+    +       +  LR +    VSSS++
Sbjct: 105 RDQFLR-FCRERKVKVRVV-TLRKHNVNPVSSSDV 137


>gi|229507503|ref|ZP_04397008.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae BX 330286]
 gi|229512301|ref|ZP_04401780.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae B33]
 gi|229519438|ref|ZP_04408881.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae RC9]
 gi|229607009|ref|YP_002877657.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae MJ-1236]
 gi|229344127|gb|EEO09102.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae RC9]
 gi|229352266|gb|EEO17207.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae B33]
 gi|229355008|gb|EEO19929.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae BX 330286]
 gi|229369664|gb|ACQ60087.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae MJ-1236]
          Length = 281

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 134 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 192

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 193 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 238

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 239 DYK-PEDIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 276


>gi|47566003|ref|ZP_00237041.1| pantoate--beta-alanine ligase [Bacillus cereus G9241]
 gi|47556920|gb|EAL15250.1| pantoate--beta-alanine ligase [Bacillus cereus G9241]
          Length = 282

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 43/236 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIVTTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANY-SAEQFIQKVL 112
              +P      +  +        +++ + ++ G   L    F         AEQ     +
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAEQTTTVAV 109

Query: 113 VEW--------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           V+                     +++  +   T+  FG   A    I++     +     
Sbjct: 110 VKRTDVLCGKQRPGHFAGVATVLMKLFNIALPTRAYFGMKDAQQVAIIEGFVADFNIPVT 169

Query: 153 FIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +    +R       SS N+   L++     A HL       +  +  GE+    +
Sbjct: 170 IVPVDIVREEDGLAKSSRNV--YLSQSEREEAHHLYRSLCVAKDRIEAGERKVEII 223


>gi|207092836|ref|ZP_03240623.1| pantoate--beta-alanine ligase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 276

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     L+  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALRECRKSLEESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +P     +        P      + E +G +A+     T E   Y A+Q ++    ++L
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEGLGVNAVF-LPKTSEMYPYEAKQRLKLYAPKFL 112


>gi|197336178|ref|YP_002157029.1| bifunctional protein HldE [Vibrio fischeri MJ11]
 gi|226702254|sp|B5FB67|HLDE_VIBFM RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|197317668|gb|ACH67115.1| bifunctional protein HldE [Vibrio fischeri MJ11]
          Length = 476

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V + N   + +     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-NESVQRLKGPGRP---INPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  +   +D AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISQVL-----PSLLVKGGDYAI-EDIAGGAEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTGIIEAI 471


>gi|167044029|gb|ABZ08714.1| putative cytidylyltransferase [uncultured marine crenarchaeote
           HF4000_APKG4H17]
          Length = 154

 Score = 41.7 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 14/148 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH  +L +A  I++   I  LS +      + +      ++  S +  +L+ 
Sbjct: 11  GTFDAIHSGHMALLNKAFSISSKVIIG-LSSDQ-----LATKKGKNPVNDYSKRLSLLKS 64

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +I   F   +   S  +      V    VK ++   +     ++      L+   
Sbjct: 65  -----VIEKNFPNSSYEVSKLENDFGPAVIEGSVKALVVSEETS---NKGLRLNELRAER 116

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                  V +  +     + +S++ IR 
Sbjct: 117 NLPSVKIVVVPMVLAKDGKAISTTRIRN 144


>gi|257067480|ref|YP_003153735.1| cytidyltransferase-related enzyme [Brachybacterium faecium DSM
           4810]
 gi|256558298|gb|ACU84145.1| cytidyltransferase-related enzyme [Brachybacterium faecium DSM
           4810]
          Length = 148

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 26/153 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  +L +A +  +     V+S +   R +      I  + P + + +I+  
Sbjct: 8   GAFDLFHIGHLNLLRRAKQSCDVLIAGVVS-DEMLREV----KRIEPVIPTAERAEIVGN 62

Query: 85  M-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +            +  +      V +        G  +R         G  +  
Sbjct: 63  LRCVDQVHI--------ETTPSKLDTWRDVGF---THFFKGDDWR---------GTPKGL 102

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +  F  V ++ +    +   SS+ +R ALT 
Sbjct: 103 LLEEQFGEVGVEIVYLPYTMHTSSTALRRALTA 135


>gi|239636746|ref|ZP_04677748.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus warneri
           L37603]
 gi|239598101|gb|EEQ80596.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus warneri
           L37603]
          Length = 132

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +    + ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQVKNKKSYYDYNQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E     +++ VE  +V   + G  +       G+ 
Sbjct: 58  MLESIRYVDLVI------------PEDGWGQKEIDVERFDVDVFVMGHDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ + E           +  N+++ +S++ I+  L    
Sbjct: 100 DFLKDKCEV----------IYLNRTEGISTTKIKQELYGKD 130


>gi|309780028|ref|ZP_07674781.1| RfaE protein [Ralstonia sp. 5_7_47FAA]
 gi|308921198|gb|EFP66842.1| RfaE protein [Ralstonia sp. 5_7_47FAA]
          Length = 165

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            +  + ++   +    +  V   G FD +H GH   L QA  +  +  + V + +   R 
Sbjct: 13  KICDSADVQARVRALPRPLVFTNGVFDILHRGHATYLAQARALGASLVVGVNT-DASVRM 71

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           + +       L+    +  +L  +   +L+        A  +  + IQ+V 
Sbjct: 72  LGKGDDRP--LNTQDDRLAVLAALEAVSLVVL-----FAERTPVELIQRVR 115


>gi|68643176|emb|CAI33470.1| CDP-glycerol-1-phosphate biosynthetic protein Gct [Streptococcus
           pneumoniae]
          Length = 130

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 60/156 (38%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L +A ++ +   + V S  FN      +   + +   +    +
Sbjct: 4   VITYGTFDLLHHGHINLLRRAKELGDYLVVVVSSDEFN------LIEKNKVCYFNYEHRK 57

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +        +I           S EQ  ++  V+   + T + G  +       G+  
Sbjct: 58  SLVEAIRYVDLVIP--------ETSWEQ--KRSDVKEYHIDTFVMGDDW------IGEFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L    ++ G   V++      +++ +S++ I+  L
Sbjct: 102 YL----KEEGVEVVYLP-----RTKEISTTKIKKDL 128


>gi|84394151|ref|ZP_00992883.1| ADP-heptose synthase [Vibrio splendidus 12B01]
 gi|84375210|gb|EAP92125.1| ADP-heptose synthase [Vibrio splendidus 12B01]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   +  A ++ +   + V + +   + +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYMNHAAELGDRLIVAVNT-DESVKRLKGPGRPV---NPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  ++  +D AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSILVKGGDYK-PEDIAGGEEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTEIIKAI 471


>gi|227824663|ref|ZP_03989495.1| glycerol-3-phosphate cytidyltransferase [Acidaminococcus sp. D21]
 gi|226905162|gb|EEH91080.1| glycerol-3-phosphate cytidyltransferase [Acidaminococcus sp. D21]
          Length = 445

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 58/154 (37%), Gaps = 34/154 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-SPPSIQE 79
           V+  G +D  H GH+ +L++A ++ +   + V             S   F +      + 
Sbjct: 4   VITYGTYDLFHQGHYNLLKRAKELGDYLIVGV------TSDYFDKSRGKFNVHDSLMTRI 57

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           + ++  GF+  I  +          E F QK+  ++  +V     G+ ++      G   
Sbjct: 58  ENVKATGFADQIVVE----------EYFGQKIDDIKKYDVDIFTVGSDWK------GHFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            L +  +           +   +++ +SS+ IR 
Sbjct: 102 YLNEYCKV----------VYLERTKGISSTQIRN 125


>gi|291569725|dbj|BAI91997.1| probable cytidyltransferase [Arthrospira platensis NIES-39]
          Length = 171

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 33/171 (19%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPHPRTIIQSSS 67
           P   +  V + G FD IH GH   L QA  +  +  +      +V    PH      +  
Sbjct: 18  PEQWRPLVFSNGCFDLIHAGHIRYLTQAKSLGRSLVVGLNSDRSVRLIKPH-----SAGY 72

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P   + ++L  +    A++ +            +   + ++E L+    + G  
Sbjct: 73  PPRPIIPELQRAEVLSHLKPVDAVVIFP-----------ESTARAIIEQLQPDIYVKGGD 121

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +            L +      +    +  L   +    +S  I   L   
Sbjct: 122 YT--------IDTLPEAPTVQSYGGKIV--LIAVEMPTSTSGIINRILHHH 162


>gi|159109392|ref|XP_001704961.1| Hypothetical protein GL50803_7139 [Giardia lamblia ATCC 50803]
 gi|157433037|gb|EDO77287.1| hypothetical protein GL50803_7139 [Giardia lamblia ATCC 50803]
          Length = 262

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 6  NIEINQSLPNHLKGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVL 53
          N E    LP+  K  VV +G +FD IH GH L+L  A+         ++
Sbjct: 12 NPETLPDLPHIGKSAVVCLGGSFDRIHRGHLLLLAVAVACVEKGGTILV 60


>gi|297823753|ref|XP_002879759.1| hypothetical protein ARALYDRAFT_903103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325598|gb|EFH56018.1| hypothetical protein ARALYDRAFT_903103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 421

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P    +P   +  +++ 
Sbjct: 61  GCFDMMHYGHCNALRQARALGDQLVVGVVSDE----EIIANKGPPV--TPLHERMTMVKA 114

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +      +++    ++   +   +  GT       +AG     
Sbjct: 115 VKWVDEVISDAPYAITEDFMKKLFDEYQIDYIIHGDDPCVLPDGTDAYALAKKAG---RY 171

Query: 141 QKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALT 175
           ++     G  +  I    L   + + +S ++ R++L 
Sbjct: 172 KQIKRTEGVSSTDIVGRMLLCVRERSISDTHSRSSLQ 208


>gi|149183104|ref|ZP_01861555.1| pantoate--beta-alanine ligase [Bacillus sp. SG-1]
 gi|148849181|gb|EDL63380.1| pantoate--beta-alanine ligase [Bacillus sp. SG-1]
          Length = 288

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 30/188 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  + EQA K  +   I V+S   +P      +    +    S +
Sbjct: 25  GFVPTMGF---LHEGHLTLAEQARKEND---IVVMSIFVNPLQ-FGPNEDFESYPRNSER 77

Query: 79  E-KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL----------EVKTVI----- 122
           + ++ E  G   ++      E  + S+         + L           V TV+     
Sbjct: 78  DSELAEASGVD-VLFLPEAEEMYSGSSVTMHVTERTDVLCGRKREGHFDGVVTVVSKLFN 136

Query: 123 -TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGH 178
             G     FG   A    +++       F      +  +R       SS N+   L++  
Sbjct: 137 IVGPDKAYFGLKDAQQVAVIEGLVRDLNFPVTIVRVPTVRETDGLAKSSRNV--YLSEEE 194

Query: 179 VLNAAHLL 186
              A  L 
Sbjct: 195 RAEAPVLY 202


>gi|291569718|dbj|BAI91990.1| probable cytidyltransferase [Arthrospira platensis NIES-39]
          Length = 175

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 33/171 (19%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPHPRTIIQSSS 67
           P   +  V + G FD IH GH   L QA  +  +  +      +V    PH      +  
Sbjct: 28  PEQWRPLVFSNGCFDLIHAGHIRYLTQAKSLGRSLVVGLNSDRSVRLIKPH-----SAGY 82

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P   + ++L  +    A++ +  +  TA           ++E L+    + G  
Sbjct: 83  PPRPIIPELQRAEVLSHLKPVDAVVIFPESTATA-----------IIEQLQPDIYVKGGD 131

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +            L +      +    +  L   +    +S  I   L   
Sbjct: 132 YT--------IDTLPEAPTVQSYGGKIV--LIAVEMPTSTSGIINRILHHH 172


>gi|15224925|ref|NP_181401.1| PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1);
           ethanolamine-phosphate cytidylyltransferase [Arabidopsis
           thaliana]
 gi|3786005|gb|AAC67351.1| putative phospholipid cytidylyltransferase [Arabidopsis thaliana]
 gi|20260170|gb|AAM12983.1| putative phospholipid cytidylyltransferase [Arabidopsis thaliana]
 gi|22136258|gb|AAM91207.1| putative phospholipid cytidylyltransferase [Arabidopsis thaliana]
 gi|330254474|gb|AEC09568.1| ethanolamine-phosphate cytidylyltransferase [Arabidopsis thaliana]
          Length = 421

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 15/157 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P   ++P   +  +++ 
Sbjct: 61  GCFDMMHYGHCNALRQARALGDQLVVGVVSDE----EIIANKGPP--VTPLHERMTMVKA 114

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +      +++    ++   +   +  GT       +AG     
Sbjct: 115 VKWVDEVISDAPYAITEDFMKKLFDEYQIDYIIHGDDPCVLPDGTDAYALAKKAG---RY 171

Query: 141 QKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALT 175
           ++     G  +  I    L   + + +S ++ R++L 
Sbjct: 172 KQIKRTEGVSSTDIVGRMLLCVRERSISDTHSRSSLQ 208


>gi|317055521|ref|YP_004103988.1| cytidyltransferase-like domain-containing protein [Ruminococcus
           albus 7]
 gi|315447790|gb|ADU21354.1| cytidyltransferase-related domain protein [Ruminococcus albus 7]
          Length = 139

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 21/131 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL++A +      + V +       ++        + P   + +I+
Sbjct: 9   TTGVFDMFHIGHLNILKRAKEQCEYLIVGVST-----DELVAEYKHKKPIIPYEERSEIV 63

Query: 83  EKMG-FSALI------------RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +     +I               F           +    + + +E K    G++  F
Sbjct: 64  NAIKYVDKVIPQTSMDKLIAWEELHFDALFHG---SDWKGSNMYDEIEAKLKTVGSEMVF 120

Query: 130 GKDRAGDRGIL 140
                G    L
Sbjct: 121 LPHTDGTSSTL 131


>gi|260828077|ref|XP_002608990.1| hypothetical protein BRAFLDRAFT_84796 [Branchiostoma floridae]
 gi|229294344|gb|EEN65000.1| hypothetical protein BRAFLDRAFT_84796 [Branchiostoma floridae]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P      V  +G FD  H GH ++L++  K+     + V     H    I  +     + 
Sbjct: 325 PVDPVDAVFTVGCFDLFHTGHEILLQRMRKMGRKVVVGV-----HDSASIYKNKRRMPIE 379

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT-GTKF 127
               + + ++      +         A+     +I+ V  +      V   G  +
Sbjct: 380 STETRMRNVKVY-ADVVFCI------ASADPTDYIECVFDKKAGETAVYVRGDDW 427


>gi|157961248|ref|YP_001501282.1| glycerol-3-phosphate cytidylyltransferase [Shewanella pealeana ATCC
           700345]
 gi|157846248|gb|ABV86747.1| glycerol-3-phosphate cytidylyltransferase [Shewanella pealeana ATCC
           700345]
          Length = 151

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 55/161 (34%), Gaps = 37/161 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPS 76
             ++  G FD  H GH  + ++   + +   + V +  FN      ++  +  F      
Sbjct: 2   KTIITYGTFDLFHYGHVRLFKRLKALGDKLIVAVSTDEFN-----ALKGKAAFF---SYF 53

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+E       ++         N  A+  I K  V    +     G  ++      G
Sbjct: 54  QRAEIVEACQYVDMVV----PETHWNQKAKD-ICKYDVSIFGM-----GDDWK------G 97

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   L    E           +  +++  +S++ I+  L +
Sbjct: 98  EFDELSVLCEV----------VYLDRTGEISTTEIKNNLAQ 128


>gi|59712841|ref|YP_205617.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio fischeri ES114]
 gi|75431485|sp|Q5E2L7|HLDE_VIBF1 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|59480942|gb|AAW86729.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio fischeri ES114]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V + N   + +     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-NESVQRLKGPGRP---INPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  +   +D AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISQVL-----PSLLVKGGDYAI-EDIAGGAEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTGIIEAI 471


>gi|284049964|ref|ZP_06380174.1| cytidyltransferase-related domain protein [Arthrospira platensis
           str. Paraca]
          Length = 172

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 33/171 (19%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPHPRTIIQSSS 67
           P   +  V + G FD IH GH   L QA  +  +  +      +V    PH      +  
Sbjct: 19  PEQWRPLVFSNGCFDLIHAGHIRYLTQAKSLGRSLVVGLNSDRSVRLIKPH-----SAGY 73

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P   + ++L  +    A++ +            +   + ++E L+    + G  
Sbjct: 74  PPRPIIPELQRAEVLSHLKPVDAVVIFP-----------ESTARAIIEQLQPDIYVKGGD 122

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +            L +      +    +  L   +    +S  I   L   
Sbjct: 123 YT--------IDTLPEAPTVQSYGGKIV--LIAVEMPTSTSGIINRILHHH 163


>gi|224144239|ref|XP_002325231.1| predicted protein [Populus trichocarpa]
 gi|222866665|gb|EEF03796.1| predicted protein [Populus trichocarpa]
          Length = 401

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 19/158 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I+ +  P         +  ++  
Sbjct: 71  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIVANKGPPVL--SMEERLALVSG 124

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +  N        +  ++      +I G       D      + 
Sbjct: 125 LKWVDEVIADAPYAITEKFMN----SLFNEHKID-----YIIHGDDPCLLPDGTDAYALA 175

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +K G              +   +I+SS     A     
Sbjct: 176 KKAGRYKQIKRTEGVSSTDIVGRILSSLKDTKACENHD 213


>gi|119433793|gb|ABL74953.1| TlmC [Streptoalloteichus hindustanus]
          Length = 498

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 33/161 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L +A ++ +   + V S +   R +   + P+   +  + + ++L  
Sbjct: 357 GCFDILHGGHVSLLSRAKELGDVLVVGVNS-DESVRRLKGPTRPV---NALADRLRVLAA 412

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK- 142
           +      +   FT +    S    ++      L     + G  +            L + 
Sbjct: 413 LSCVD--LVVPFTGD----SPTDLMEL-----LRPDVYVKGADYTL--------QTLPEA 453

Query: 143 -RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
              E++G     +  + +      S++ I   +    +  A
Sbjct: 454 PLVERWGGAVRLLPLVDDA-----STTRIIRRI--HDLAAA 487


>gi|2623676|gb|AAB86494.1| KOI-4 [Mus musculus]
          Length = 34

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 259 ESFIFD-FSQEIYGQRCTVSFFDYLRPEIKFKDI 291
           E+ I   F ++ YG+   V+   YLRPE  F  +
Sbjct: 1   ETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSL 34


>gi|224477592|ref|YP_002635198.1| putative teichoic acid biosynthesis protein D [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222422199|emb|CAL29013.1| putative teichoic acid biosynthesis protein D [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 131

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   I  LS +              +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYL-IVALSSDE-----FNKIKNKKSYYSYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I               + QK   V+  E+ T + G  +       G+  
Sbjct: 58  MLESIRYVDLVI-----------PENDWGQKTKDVDRYEIDTFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+++ E           +  N+++ +S++ I+  L
Sbjct: 101 FLKEQCEV----------VYLNRTEGISTTQIKEEL 126


>gi|229586681|ref|YP_002845182.1| Glycerol-3-phosphate cytidyltransferase TagD [Rickettsia africae
           ESF-5]
 gi|228021731|gb|ACP53439.1| Glycerol-3-phosphate cytidyltransferase TagD [Rickettsia africae
           ESF-5]
          Length = 139

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +  + NI +N++ P + +  V+  G FD +H GH   +E   K   +    +++  P   
Sbjct: 15  IEYYENISLNKNCPINSE-IVLVGGCFDLLHYGH---IEFLRKAKKHGKYLIVALEPDET 70

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLET 99
            I         +     + KIL        ++      + 
Sbjct: 71  IIKYKKRQP--IHNQLQRAKILSSFTFVDKVLILPTLKDF 108


>gi|315038846|ref|YP_004032414.1| hypothetical protein LA2_08550 [Lactobacillus amylovorus GRL 1112]
 gi|312276979|gb|ADQ59619.1| hypothetical protein LA2_08550 [Lactobacillus amylovorus GRL 1112]
          Length = 383

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           I  F+  H GH  +L QA  IA N PI V+         +Q       +     + K   
Sbjct: 7   ISEFNPFHSGHEFLLNQARLIAQNDPIVVI----MSGNYVQRGE--MAIMSKWERAKAAL 60

Query: 84  KMGFSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
           + G   +    F+     A+  +   I+++    L V  ++ G
Sbjct: 61  QSGADLVFEMPFSTAVEPADLFSLGNIEQLS--KLGVTDLVFG 101


>gi|326486477|gb|ADZ76304.1| putative glycerol-3-phosphate [Campylobacter jejuni subsp. jejuni]
          Length = 129

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 53/158 (33%), Gaps = 38/158 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H GH  ILE+A  + +   + V    L+F         +    + +    
Sbjct: 4   VITFGTFDLFHYGHLRILERAASLGDKLIVGVSSDSLNF---------AKKHRYPIYSEQ 54

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  I+  +   + +  + +LE        ++        +   ++ G  ++        
Sbjct: 55  ERLNIISSLKCVSCVFLEESLELK----RDYLL-----KYQANILVMGDDWK-------- 97

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                    K+       D +   ++  +S++ I   +
Sbjct: 98  --------GKFDCFNDICDVIYFERTPSISTTEIIERI 127


>gi|78484850|ref|YP_390775.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Thiomicrospira crunogena XCL-2]
 gi|118573572|sp|Q31IC2|HLDE_THICR RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|78363136|gb|ABB41101.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase
           [Thiomicrospira crunogena XCL-2]
          Length = 480

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   L +A +  +   + V S       +++  S    +   + + +
Sbjct: 341 VFTNGCFDLLHSGHVRYLNEAARQGDRLVVAVNSDES--VKLLKGDSRP--IVELAGRME 396

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     ++   F  E    + E+ I       L    ++ G  ++
Sbjct: 397 LLSALSCVDWVV--PFNEE----TPERLIC-----KLAPDVLVKGGDYK 434


>gi|325957284|ref|YP_004292696.1| hypothetical protein LAC30SC_08280 [Lactobacillus acidophilus 30SC]
 gi|325333849|gb|ADZ07757.1| hypothetical protein LAC30SC_08280 [Lactobacillus acidophilus 30SC]
          Length = 383

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           I  F+  H GH  +L QA  IA N PI V+         +Q       +     + K   
Sbjct: 7   ISEFNPFHSGHEFLLNQARLIAQNDPIVVI----MSGNYVQRGE--MAIMSKWERAKAAL 60

Query: 84  KMGFSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
           + G   +    F+     A+  +   I+++    L V  ++ G
Sbjct: 61  QSGADLVFEMPFSTAVEPADLFSLGNIEQLS--KLGVTDLVFG 101


>gi|300741700|ref|ZP_07071721.1| pantetheine-phosphate adenylyltransferase [Rothia dentocariosa
           M567]
 gi|300380885|gb|EFJ77447.1| pantetheine-phosphate adenylyltransferase [Rothia dentocariosa
           M567]
          Length = 165

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 33/159 (20%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +AI  G+FD IH GH  I+ +A  + +   + V             +S    L   S + 
Sbjct: 2   LAICPGSFDPIHHGHLEIIARAATLFDEVLVGV-----------AHNSSKKYLFSLSERV 50

Query: 80  KI----LEKMGFSA--LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            +    L + G +   +      +  A + A++   +VLV+ L       G  + +    
Sbjct: 51  NLVECSLAERGITTVKVEVIPPGVLLAQW-AQEHGAQVLVKGLRS-----GADYEYEAPM 104

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           A     L          TVF+     ++   VSS+ IR 
Sbjct: 105 ASMNRHLANL------ETVFLA--GEDRFGGVSSTIIRE 135


>gi|296090469|emb|CBI40665.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 34/199 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P         +  ++  
Sbjct: 3   GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIIANKGPPVL--SMEERLVLVSG 56

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I        A    EQF+  +  E  ++  +I G       D      + +K 
Sbjct: 57  LKWVDEVIA---NAPYAIT--EQFMDTLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKKA 110

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGHVLNAAHLLGYRF---------TI 192
           G                +++ VSS++I  R               G              
Sbjct: 111 GRYKQIK----------RTEGVSSTDIVGRILSYIKDTKTHEDHNGSTSLHGERDNTNEA 160

Query: 193 ESDVIHGEKIGRTLGFPTA 211
           E +    + +  +   PT+
Sbjct: 161 EGEKCQSKGLHLSHFLPTS 179


>gi|163804146|ref|ZP_02197918.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio sp. AND4]
 gi|159172037|gb|EDP57007.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio sp. AND4]
          Length = 312

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 51/123 (41%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +    ++ +  
Sbjct: 165 IEAVKKARAKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNTDD----SVKRLK 220

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   ++P   +  +L  +G    ++   F+ +    + ++ I +VL        ++ G 
Sbjct: 221 GPGRPVNPTDRRMAVLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSLLVKGG 269

Query: 126 KFR 128
            ++
Sbjct: 270 DYK 272


>gi|150401752|ref|YP_001325518.1| phosphopantetheine adenylyltransferase [Methanococcus aeolicus
           Nankai-3]
 gi|150014455|gb|ABR56906.1| cytidyltransferase-related domain [Methanococcus aeolicus Nankai-3]
          Length = 153

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 27/160 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPS 76
           K  VV  G FD +H GH  +L+ A        + + ++ +         +     + P  
Sbjct: 4   KATVVVGGTFDILHKGHKKLLKYASNF---GKLYIGITSDK-----FAGAYKTHNIYPLE 55

Query: 77  IQE----KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           I+     K L+      +I+              +   +  + L++  ++   +    ++
Sbjct: 56  IRINNLKKYLDSHNIEYVIKIIDD---------AYGDTIGNDKLDI--IVVTPET---EN 101

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            A     ++ + +         D +     + +S++ IR 
Sbjct: 102 NAKKINEIRAKNKLKPLEIKIYDYVLGEDKKPISTTRIRN 141


>gi|70727254|ref|YP_254170.1| teichoic acid biosynthesis protein D [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447980|dbj|BAE05564.1| teichoic acid biosynthesis protein D [Staphylococcus haemolyticus
           JCSC1435]
          Length = 132

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 57/159 (35%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   I  LS +              +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYL-IVALSSDE-----FNQIKNKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I             +   +++ V+  EV   + G  +       G+   
Sbjct: 58  MLESIRYVDLVIPEN----------DWGQKEIDVDRFEVDVFVMGHDW------EGEFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+ + E           +   +++ +S++ I+  L    
Sbjct: 102 LKDKCEV----------VYLKRTEGISTTKIKQELYGKD 130


>gi|255975363|ref|ZP_05425949.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T2]
 gi|307277771|ref|ZP_07558857.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0860]
 gi|255968235|gb|EET98857.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T2]
 gi|306505650|gb|EFM74834.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0860]
 gi|315163241|gb|EFU07258.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0645]
          Length = 134

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 30/160 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L +A +  +   + + +                T      ++K
Sbjct: 4   IITYGTFDLLHYGHINLLRRAKERGDYLIVGLST-----DEFNWEEKGKKTYFSFDKRKK 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q IQ   ++   V   + G  +      +G    
Sbjct: 59  LLEAIRYVDLVIPEN--------SWQQKIQD--IKEFHVAEFVIGDDW------SGKFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +     +     +++      ++  +S++ I+  L     
Sbjct: 103 IA---NETNAEVIYLP-----RTPEISTTQIKKDLENKTF 134


>gi|108803556|ref|YP_643493.1| bifunctional ADP-heptose synthase [Rubrobacter xylanophilus DSM
           9941]
 gi|108764799|gb|ABG03681.1| RfaE bifunctional protein, domain II [Rubrobacter xylanophilus DSM
           9941]
          Length = 455

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 31/160 (19%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +LE A  + +   +  L+ +   R +     P   L P  
Sbjct: 316 GGTVVATGGCFDLLHAGHVRMLEAARSLGD-CLVVCLNSDASVRRLKGEDRP---LVPQE 371

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  +L  +G    ++ ++        + E+ ++++                 F K    
Sbjct: 372 ERATVLRALGCVDEVLLFEED------TPEEALERLRP-------------HIFAKGGDY 412

Query: 136 DRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           +   L +     ++G   V +           +S  IR A
Sbjct: 413 ELSELPEARVLARWGGEAVILP----YVEGRSTSRLIREA 448


>gi|86148744|ref|ZP_01067018.1| ADP-heptose synthase [Vibrio sp. MED222]
 gi|218708454|ref|YP_002416075.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio splendidus LGP32]
 gi|254802025|sp|B7VIX1|HLDE_VIBSL RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|85833474|gb|EAQ51658.1| ADP-heptose synthase [Vibrio sp. MED222]
 gi|218321473|emb|CAV17425.1| Bifunctional protein hldE [Vibrio splendidus LGP32]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   +  A ++ +   + V + +   + +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYMNHAAELGDRLIVAVNT-DESVKRLKGPGRPV---NPTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I +VL        ++ G  ++  ++ AG   +
Sbjct: 399 VLAGLGAVDWVV--PFSED----TPQRLISEVL-----PSILVKGGDYK-PEEIAGGAEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 447 IAA-----GGEVKVL-----NFEDGCSTTEIIKAI 471


>gi|323975939|gb|EGB71033.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli
           TW10509]
          Length = 134

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLAQKAE------YLRGYSADALVMGDDW 96


>gi|281357824|ref|ZP_06244310.1| cytidyltransferase-related domain protein [Victivallis vadensis
           ATCC BAA-548]
 gi|281315771|gb|EFA99798.1| cytidyltransferase-related domain protein [Victivallis vadensis
           ATCC BAA-548]
          Length = 166

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 8/115 (6%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +   + L    K  VV  G FD +H GH   + +A ++ +   + +++ +   R++   S
Sbjct: 16  VRWREQLKRDGKTLVVTNGCFDILHRGHAEYMYEARELGDAL-LVLINSDASVRSLKGPS 74

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKF---TLETANYSAEQFIQ--KVLVEWL 116
            PI      +     L      A++ +       E A  +A+++++     ++ L
Sbjct: 75  RPIIDQYNRAYMLAALAS--VDAVVVFDGSRCDRELAALAADRYVKGGDYTLDKL 127


>gi|68071561|ref|XP_677694.1| ethanolamine-phosphate cytidylyltransferase [Plasmodium berghei
           strain ANKA]
 gi|56497908|emb|CAH98267.1| ethanolamine-phosphate cytidylyltransferase, putative [Plasmodium
           berghei]
          Length = 558

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ-EKILE 83
           G+FD  HLGH  I+E A K+ +   + + S       + +     F ++    +   +L 
Sbjct: 401 GSFDMFHLGHLKIIENAKKLGDYLLVGIYS-----DEVRKLKGNHFPITSVLERTLTVLA 455

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKF-RFGKD 132
             G   ++            A   I +  ++  ++ TV+ G      +  FG D
Sbjct: 456 MKGVDDVVIC----------APWVITEGFIKRFQIDTVVRGSISDYNYSSFGAD 499


>gi|332674137|gb|AEE70954.1| nicotinate-nucleotide adenylyltransferase [Helicobacter pylori 83]
          Length = 174

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I++Q +++   + + VL   P  +   +   P F  +    +E     
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL---PAYQNPFK--KPCFWGAQTRFKELERAL 72

Query: 85  MGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            G   ++   F    E A  + E  I    +   +   ++ G           +   L K
Sbjct: 73  KGMDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKELLK 132

Query: 143 RGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           R E   F  +  +E++              +SSS IR +L
Sbjct: 133 RVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 172


>gi|225462533|ref|XP_002265606.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 431

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 34/199 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P         +  ++  
Sbjct: 72  GCFDLMHYGHANALRQAKALGDELVVGVVSDE----EIIANKGPPVL--SMEERLVLVSG 125

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I        A    EQF+  +  E  ++  +I G       D      + +K 
Sbjct: 126 LKWVDEVIA---NAPYAIT--EQFMDTLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKKA 179

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGHVLNAAHLLGYRF---------TI 192
           G                +++ VSS++I  R               G              
Sbjct: 180 GRYKQIK----------RTEGVSSTDIVGRILSYIKDTKTHEDHNGSTSLHGERDNTNEA 229

Query: 193 ESDVIHGEKIGRTLGFPTA 211
           E +    + +  +   PT+
Sbjct: 230 EGEKCQSKGLHLSHFLPTS 248


>gi|149173941|ref|ZP_01852570.1| RfaE bifunctional protein, domains I & II [Planctomyces maris DSM
           8797]
 gi|148847471|gb|EDL61805.1| RfaE bifunctional protein, domains I & II [Planctomyces maris DSM
           8797]
          Length = 514

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H+GH   LEQA    +   + V S +           PIF       
Sbjct: 357 QKVVLTNGCFDVMHIGHVSYLEQAAAEGDCLIVAVNSDDSVRSLNKGPDRPIF---GQDH 413

Query: 78  QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +  +L  + G   ++   F       +  + I  +  + L
Sbjct: 414 RASMLAALEGIDYVVV--FDES----TPCELISVLKPDLL 447


>gi|296169128|ref|ZP_06850787.1| ADP-heptose synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896248|gb|EFG75910.1| ADP-heptose synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 159

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           L    +  V   G FD +H GH  +L QA ++ +   I +++ +   R +  +  P+   
Sbjct: 13  LRRDGRVVVATGGCFDLLHTGHIRLLRQARELGDAL-IVLVNSDASVRALKGAGRPV--- 68

Query: 73  SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
              + + ++L  +     +  +         + E+     ++E L     + G  +   +
Sbjct: 69  MRDADRARVLAALACVDGVTIFD------GLTPER-----MLETLRPDIWVKGGDYVAAE 117

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
               D         ++G   V +  +    +   SS  I
Sbjct: 118 LPEADMVY------RHGGEVVILPTV----AGYSSSRLI 146


>gi|94500384|ref|ZP_01306916.1| ADP-heptose synthase [Oceanobacter sp. RED65]
 gi|94427419|gb|EAT12397.1| ADP-heptose synthase [Oceanobacter sp. RED65]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 27/158 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L+ A  + +   + V + +   R +     P   ++    +  
Sbjct: 343 VMTNGCFDILHPGHVSYLKAAKALGDKLIVAVNT-DDSVRRLKGPDRP---INSTEHRMD 398

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     ++        +  + ++ I  +L + L     + G  ++  +D AG + +
Sbjct: 399 VLAGLSSVDYVV------AFSEDTPQRLIANLLPDIL-----VKGGDYKI-EDIAGGQEV 446

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +       G     +     N  +  S++NI  ++ + 
Sbjct: 447 I-----SNGGEVKVL-----NFEEGCSTTNIINSIKQH 474


>gi|253577526|ref|ZP_04854839.1| pantoate-beta-alanine ligase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843066|gb|EES71101.1| pantoate-beta-alanine ligase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 300

 Score = 41.3 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 51/171 (29%), Gaps = 33/171 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +G    +H GH  +L +A    +   + VLS   +P     +         P     + 
Sbjct: 35  TMGY---LHEGHASLLRKARAEND---LVVLSIFVNPIQFGPNEDFERYPRDPEKDLALA 88

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL---------------------EVKTV 121
           E+ G   +    F         +     + V  L                     ++  +
Sbjct: 89  EREGVDFV----FLPSVEEMYPQPTRTHIKVAGLTDVLCGASRPGHFDGVTTVVGKLFHI 144

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE--LRNNKSQIVSSSNI 170
           +   +  FG+  A    ++ +  E   F    I    +R      +SS N+
Sbjct: 145 VQPDRAYFGQKDAQQVAVITRMVEDLNFDVEVIPCPIVREADGLALSSRNV 195


>gi|237742471|ref|ZP_04572952.1| ligase [Fusobacterium sp. 4_1_13]
 gi|229430119|gb|EEO40331.1| ligase [Fusobacterium sp. 4_1_13]
          Length = 345

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A+   +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKALSENDVLHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIEVFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      + +   +   +  +S+S +R  +  G++ +  +L
Sbjct: 271 MLKKLPE-NNIECIVVPRKKYLDNV-ISASTVRQIIKNGNLEDLKNL 315


>gi|168333248|ref|ZP_02691538.1| citC [Epulopiscium sp. 'N.t. morphotype B']
          Length = 334

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 39/177 (22%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS--- 88
           LGH  ++EQA     N    V+ F      I++     F       + +++ + G     
Sbjct: 157 LGHKYLIEQASLENEN----VIVF------IVEEDKSAFK---FRDRIELVRQ-GVKEFG 202

Query: 89  ALIRYK----------FTLETANYSAEQ----------FIQKVLVEWLEVKTVITGTKFR 128
            ++             F       + +              K  V  L +K    G +  
Sbjct: 203 NVVVLPASKYIISQATFPTYFIKQNDDATAIYTELDCSIFGKYFVNALNIKKRYVGNEPN 262

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
                + +   ++K    YG     ++  +   +  +S++ +R  L +        L
Sbjct: 263 CNLTSSYN-DTMKKVLPSYGIDVRVVNR-KEINATPISATEVRKLLDQHEFEKIKAL 317


>gi|223041534|ref|ZP_03611735.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus minor
           202]
 gi|223017629|gb|EEF16039.1| glycerol-3-phosphate cytidylyltransferase [Actinobacillus minor
           202]
          Length = 163

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 33/166 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++   + +   I  LS +                S    +E 
Sbjct: 7   VITYGTFDLFHIGHVRLLKRLRALGDKL-IVGLSSD----EFNAIKGKKSFFSYEERKEI 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L       +                + QK+  V+  +      G  +       G    
Sbjct: 62  LLSCKYVDEVF-----------PEHNWEQKIDDVQKYQADIFGMGNDW------VGKFDE 104

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           L                +   +++ +S++ I+  L++        L
Sbjct: 105 LNAYCRV----------VYLERTEDISTTEIKNNLSRITPKQCQEL 140


>gi|147674683|ref|YP_001217938.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Vibrio cholerae O395]
 gi|262168417|ref|ZP_06036114.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae RC27]
 gi|172047584|sp|A5F5J2|HLDE_VIBC3 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|146316566|gb|ABQ21105.1| sugar kinase, pfkB family [Vibrio cholerae O395]
 gi|227014329|gb|ACP10539.1| sugar kinase, pfkB family [Vibrio cholerae O395]
 gi|262023309|gb|EEY42013.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae RC27]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  +L   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAILPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|256619580|ref|ZP_05476426.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 4200]
 gi|256963449|ref|ZP_05567620.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HIP11704]
 gi|307272700|ref|ZP_07553947.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0855]
 gi|307276101|ref|ZP_07557234.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX2134]
 gi|256599107|gb|EEU18283.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 4200]
 gi|256953945|gb|EEU70577.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HIP11704]
 gi|295113341|emb|CBL31978.1| Glycerol-3-phosphate cytidylyltransferase [Enterococcus sp. 7L76]
 gi|306507431|gb|EFM76568.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX2134]
 gi|306510314|gb|EFM79337.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0855]
          Length = 134

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 30/160 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L +A +  +   + + +                T      ++K
Sbjct: 4   IITYGTFDLLHYGHINLLRRAKERGDYLIVGLST-----DEFNWDEKGKKTYFSFDKRKK 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q IQ   ++   V   + G  +      +G    
Sbjct: 59  LLEAIRYVDLVIPEN--------SWQQKIQD--IKEFHVAEFVIGDDW------SGKFDF 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +     +     +++      ++  +S++ I+  L     
Sbjct: 103 IA---NETNAEVIYLP-----RTPEISTTQIKKDLENKTF 134


>gi|308160929|gb|EFO63395.1| Hypothetical protein GLP15_1864 [Giardia lamblia P15]
          Length = 262

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 6  NIEINQSLPNHLKGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVL 53
          N E    LP+  K  VV +G +FD IH GH L+L  A+         ++
Sbjct: 12 NPETLPDLPHIGKSAVVCLGGSFDRIHRGHLLLLAVAVACVEKGGTILV 60


>gi|156096442|ref|XP_001614255.1| cytidyltransferase domain containing protein [Plasmodium vivax
           SaI-1]
 gi|148803129|gb|EDL44528.1| cytidyltransferase domain containing protein [Plasmodium vivax]
          Length = 606

 Score = 41.3 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 25/170 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ--SSSPIFTLSPPSIQEKIL 82
           G+FD  H+GH  ILE A K+ +   +       H   +++         +S       +L
Sbjct: 447 GSFDIFHIGHLKILENAKKLGDYLIVG-----MHSDEVVRRMKGKYFPVVSLLERTLNVL 501

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT--KFRFGKDRAG----- 135
                  ++            A   I +  ++  ++  V+ GT   + +  +        
Sbjct: 502 AMKVVDDVVI----------GAPWLISESFIKRFQIDIVVRGTIVDYFYSSNELDPYAVP 551

Query: 136 -DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
               I Q+   + G  T  I E        + S+  +    + ++    +
Sbjct: 552 KKLNIYQELSSESGITTFEIIERIEKNKNCLMSTISKRKKKEDNIWKVNN 601


>gi|261253875|ref|ZP_05946448.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio orientalis CIP 102891]
 gi|260937266|gb|EEX93255.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio orientalis CIP 102891]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQAKGEKVVMTNGCFDILHAGHVSYLNHAAQLGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +P   +  +L  +G    ++   F  +    + ++ I +VL + L     + G 
Sbjct: 388 RPV---NPTDRRMAVLAGLGAVDWVV--PFGED----TPQRLISEVLPDLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N     S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVI-----ANGGKVEVL-----NFEDGCSTTEIIDAI 471


>gi|261211533|ref|ZP_05925821.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. RC341]
 gi|260839488|gb|EEX66114.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. RC341]
          Length = 476

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F  +    + ++ I  VL + L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFGED----TPQRLIAAVLPDLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  +D AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEDIAGGQEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|317011536|gb|ADU85283.1| hypothetical protein HPSA_06575 [Helicobacter pylori SouthAfrica7]
          Length = 171

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 15/160 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I+EQ +++   + + VL   P  +   +   P F  +    +E  L  
Sbjct: 15  GSFDPLHKAHLAIIEQTLELLPFARLIVL---PAYQNPFK--KPCFLDAQTRFKELELAL 69

Query: 85  MGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            G   ++   F    E A  + E  +    +   +   ++ G           +   L K
Sbjct: 70  KGMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWKNATELLK 129

Query: 143 RGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           R E   F  +  +E++              +SSS IR +L
Sbjct: 130 RVELVVFERIGYEEIQFKGRYHPLKGIDAPISSSAIRASL 169


>gi|223042872|ref|ZP_03612920.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus capitis
           SK14]
 gi|222443726|gb|EEE49823.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus capitis
           SK14]
          Length = 132

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKNKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   V+  EV   + G  +       G+  
Sbjct: 58  MLESIRYVDLVI-----------PEEGWGQKEKDVDRFEVDVFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+ + E           +  N+++ +S++ I+  L    
Sbjct: 101 FLKDKCEV----------IYLNRTEGISTTKIKQELYGKD 130


>gi|195427885|ref|XP_002062007.1| GK16881 [Drosophila willistoni]
 gi|194158092|gb|EDW72993.1| GK16881 [Drosophila willistoni]
          Length = 524

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 23/185 (12%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             VV  G FD IHLGH + L QA+  ++   +  ++       + +S      + P   +
Sbjct: 147 PSVVLGGTFDRIHLGHKIFLTQAVLRSHKRLVVGVT----TAAMTKSKILPDLILPVEER 202

Query: 79  EKILEK--MGFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
            + L    +     +                 Q+   + +       ++   +   G  +
Sbjct: 203 IEQLRDFLLDIDDTLHYDIVPIDDPF---GPTQYDPDLDM-------IVVSAETLRGGQK 252

Query: 134 AGDRGILQKRGEKYGFHTVFIDE--LRNNKSQIVSSSNIRTALTKGHVL--NAAHLLGYR 189
             +    ++  E   F    ++   L       VSSSN R  L         A   L   
Sbjct: 253 VNEIRKSKQLNELDIFVIDIVESNNLDGIHETKVSSSNTRIDLLGTRWRKPEAKPQLPDY 312

Query: 190 FTIES 194
             I  
Sbjct: 313 PYIIG 317


>gi|169846780|ref|XP_001830104.1| sulfate adenylyltransferase [Coprinopsis cinerea okayama7#130]
 gi|116508874|gb|EAU91769.1| sulfate adenylyltransferase [Coprinopsis cinerea okayama7#130]
          Length = 575

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 32/119 (26%), Gaps = 9/119 (7%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     +   +   + E I++K   G 
Sbjct: 203 MHRAHREL---TVRAARQRQANVLI---HPVVGLTKPGDVDHYTRVRVYEAIMKKYPNGL 256

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
             L      +  A    E     ++ +       I G         +           +
Sbjct: 257 GHLALLPLAMRMAG-PREAVWHSIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQ 314


>gi|306844968|ref|ZP_07477549.1| pantoate--beta-alanine ligase [Brucella sp. BO1]
 gi|306274600|gb|EFM56389.1| pantoate--beta-alanine ligase [Brucella sp. BO1]
          Length = 293

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 60/199 (30%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEI--NQSLPNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE   +   P   +G  +     +G    +H GH  ++ +A    +   +TV+S
Sbjct: 1   MQIIHTIEELRHALAPARQQGKKIGFAPTMGY---LHKGHLELVRRARVEND---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGAHEDLDRYPRDLERDAGLLRDAQVGYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHT-- 151
            L               V TV+       G     FG+       I+++  +        
Sbjct: 111 PLGNQMEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRI 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V ++ +R +     SS N+
Sbjct: 171 VGVETVREDDGLACSSRNV 189


>gi|288904381|ref|YP_003429602.1| pantoate--beta-alanine ligase [Streptococcus gallolyticus UCN34]
 gi|306830413|ref|ZP_07463583.1| pantoate-beta-alanine ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|288731106|emb|CBI12652.1| Putative pantoate--beta-alanine ligase [Streptococcus gallolyticus
           UCN34]
 gi|304427438|gb|EFM30540.1| pantoate-beta-alanine ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 280

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H +E  +      K      G V  +G    +H GH  ++++A+   ++  ++V  
Sbjct: 1   MKIVHTVEDVRKAVQAWKADGKSIGLVPTMGY---LHEGHKSLIDKAVAENDHVVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              ++ E  G S +    F  E ++  +  F   + + 
Sbjct: 58  ---NPIQFAPTEDLESYPRDLEQDARLCEAAGASLI----FNPEPSDMYSPTFSSFIDMS 110

Query: 115 WL-----------EVKTV--ITGTKF--------RFGKDRAGDRGILQKRGEKYGFHTVF 153
            L             + V  + G  F         FG+  A    +++   +   F+   
Sbjct: 111 TLTQGLCGKTRPIHFRGVCTVVGKLFNIVEPNRAYFGQKDAQQLAVIKHMVDDLNFNLEI 170

Query: 154 I--DELRNNKSQIVSS 167
           I    +R       SS
Sbjct: 171 IGCPIVRETDGLAKSS 186


>gi|226226976|ref|YP_002761082.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Gemmatimonas
           aurantiaca T-27]
 gi|226090167|dbj|BAH38612.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Gemmatimonas
           aurantiaca T-27]
          Length = 162

 Score = 41.3 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 42/178 (23%)

Query: 6   NIEINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
             +        ++G VV   G FD +H GH  +L+ A +      + V            
Sbjct: 16  GWDAAAEWRQQVRGAVVFTNGVFDLVHPGHVEVLDMARREGAALIVGV-----------N 64

Query: 65  SSSPIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           S + +  L          + +  +L  +    A++           + +       VE L
Sbjct: 65  SDASVQRLKGPTRPVRTVAERAMVLAALEAVDAVVV------FGEDTPQAL-----VECL 113

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +   ++ G  +        D           G   V +  + +      S+++I   L
Sbjct: 114 QPDVIVKGGDYAPETIVGADVVT------ARGGRVVVVPLVPDQ-----STTSIIEKL 160


>gi|254492260|ref|ZP_05105434.1| kinase, pfkB family [Methylophaga thiooxidans DMS010]
 gi|224462585|gb|EEF78860.1| kinase, pfkB family [Methylophaga thiooxydans DMS010]
          Length = 481

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 27/159 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   L+QA    +   + + +     +  ++       ++    +  
Sbjct: 349 VFTNGCFDILHAGHVSYLQQARAQGDRLIVAINTDESVTK--LKGEGRP--INTAERRLT 404

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     +            + E  ++ +  + L     + G  +    D+ G  G 
Sbjct: 405 VLAGLADVDWVTC------FQGDTPEDLLRYIQPDIL-----VKGGDY----DKKGVVG- 448

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             +  E YG     +  + N      S++ I   + +G 
Sbjct: 449 -WEIVEGYGGEVKVMGLVEN-----CSTTAIVNKIHQGR 481


>gi|51830408|gb|AAU09752.1| YJR010W [Saccharomyces cerevisiae]
          Length = 511

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL+   HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLT---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|67459022|ref|YP_246646.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia felis
           URRWXCal2]
 gi|67004555|gb|AAY61481.1| Glycerol-3-phosphate cytidyltransferase TagD [Rickettsia felis
           URRWXCal2]
          Length = 184

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 7/100 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +  + NI +N++ P + +  V+  G FD +H GH   +E   K        +++  P   
Sbjct: 29  IEYYENISLNKNCPINSE-IVLVGGCFDLLHYGH---IEFLRKAKKQGKYLIVALEPDET 84

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLET 99
            I         +     + KIL        ++      + 
Sbjct: 85  IIKYKKRQP--IHNQLQRAKILSSFTFVDKVLILPKLKDF 122


>gi|323975313|gb|EGB70416.1| nicotinamide-nucleotide adenylyltransferase [Escherichia coli
           TW10509]
          Length = 342

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 56/185 (30%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + +  
Sbjct: 16  LVVGKFAPLHCGHERLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVSFPRATVLV 75

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 76  LTP-----ELIARYNLPAIPHNDADADI----HRHYVATLCLQVLHCRPHAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G          +   +++      I   R    +  S + IR+ + +   + A  +    
Sbjct: 127 G--------FAKVLTKRFAQPVEHIRLQRPLGDKSPSGTLIRSDVHRYRYMLAHDVYRSF 178

Query: 190 FTIES 194
                
Sbjct: 179 VRRIC 183


>gi|212224789|ref|YP_002308025.1| phosphopantetheine adenylyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009746|gb|ACJ17128.1| phosphopantetheine adenylyltransferase [Thermococcus onnurineus
           NA1]
          Length = 160

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 26/162 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     +  L+ +   R    +   +          K
Sbjct: 8   VVVGGTFDRLHLGHKALLRKAFEVGKYVYVG-LTADEMVRNKPHADKILPYKLRLRDLLK 66

Query: 81  ILEKMGFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             E  G+S     K      F  +  +  A    ++     L V             +RA
Sbjct: 67  FFEVNGYSNYRIIKIHTAIGFADKMKSLDAIVVSEETYKGALIV-------------NRA 113

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +   L+          V I  +R++    +SSS IR  L  
Sbjct: 114 REERGLKPL------EIVTIGIVRSSLGAKISSSLIRAGLID 149


>gi|167625458|ref|YP_001675752.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Shewanella halifaxensis HAW-EB4]
 gi|189028294|sp|B0TTF2|HLDE_SHEHH RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|167355480|gb|ABZ78093.1| rfaE bifunctional protein [Shewanella halifaxensis HAW-EB4]
          Length = 476

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 45/171 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           +  V+  G FD +H GH   L+QA  + +   + V            + + +  L     
Sbjct: 341 ERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAV-----------NTDASVKRLKGEGR 389

Query: 73  --SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +    +  +L  +     ++   FT +    + ++ I ++L + L     + G  ++ 
Sbjct: 390 PVNTEDRRMTVLAALASVDWVV--PFTED----TPQRIISRLLPDLL-----VKGGDYKV 438

Query: 130 GKDRAGDRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +D AG   ++    + +  GF               +S++ I   +    
Sbjct: 439 -EDIAGGAEVMAAGGQVKVLGFE------------DGISTTAIIQNIMANQ 476


>gi|187927272|ref|YP_001897759.1| bifunctional protein RfaE [Ralstonia pickettii 12J]
 gi|187724162|gb|ACD25327.1| rfaE bifunctional protein [Ralstonia pickettii 12J]
          Length = 178

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            +  + ++   +    +  V   G FD +H GH   L QA  +  +  + V + +   R 
Sbjct: 26  KICDSADVQARVRALPRPLVFTNGVFDILHRGHATYLAQARALGASLVVGVNT-DASVRM 84

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           + +       L+    +  +L  +   +L+        A  +  + IQ+V 
Sbjct: 85  LGKGDDRP--LNTQDDRLAVLAALEAVSLVVL-----FAERTPVELIQRVR 128


>gi|34580526|ref|ZP_00142006.1| hypothetical glycerol-3-phosphate cytidyltransferase (tagD)
           [Rickettsia sibirica 246]
 gi|28261911|gb|EAA25415.1| hypothetical glycerol-3-phosphate cytidyltransferase (tagD)
           [Rickettsia sibirica 246]
          Length = 139

 Score = 40.9 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +  + NI +N++ P + +  V+  G FD +H GH   +E   K   +    +++  P   
Sbjct: 15  IEYYENISLNKNCPINSE-IVLVGGCFDLLHYGH---IEFLRKAKKHGKYLIVALEPDET 70

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLET 99
            I         +     + KIL        ++      + 
Sbjct: 71  IIKYKKRQP--IHNQLQRAKILSSFTFVDKVLILPKLKDF 108


>gi|225075594|ref|ZP_03718793.1| hypothetical protein NEIFLAOT_00608 [Neisseria flavescens
           NRL30031/H210]
 gi|224953016|gb|EEG34225.1| hypothetical protein NEIFLAOT_00608 [Neisseria flavescens
           NRL30031/H210]
          Length = 278

 Score = 40.9 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  +              +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIKELREWRKTAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  +F +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAGEGVAVVFAPDEKELYPNVEQRFNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDELR 158
            +     +  V TV+             FGK       I++   E   F    V +D  R
Sbjct: 115 GKFRPGHFRGVATVVTKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +    +SS N    L++     A  L 
Sbjct: 175 ASDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|284006338|emb|CBA71573.1| transcriptional regulator [Arsenophonus nasoniae]
          Length = 415

 Score = 40.9 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 11/168 (6%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
           +N   P   K   V  G F  +H GH  ++++A    +   + +    P  R +    S 
Sbjct: 55  LNIEYPLKPKRIGVVFGKFYPLHTGHIYLIQRACSQVDELYVILCHDEPRDRALFI-DSS 113

Query: 69  IFTLSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +      S + + L +  F     +  + F         E +     V    +K  +   
Sbjct: 114 MSQQPTVSDRLRWLLQT-FKYQKNIYIHSFDE----QDIEPYPHGWQVWSEGMKKFLMAK 168

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             +     +G+   +    +  G   V ID  R      +S   IR A
Sbjct: 169 NIQPQFIYSGEVDDIAHYKKYLGAEVVLIDPERTF--MNISGHQIRQA 214


>gi|208433982|ref|YP_002265648.1| pantoate-beta-alanine ligase [Helicobacter pylori G27]
 gi|226700761|sp|B5Z6E3|PANC_HELPG RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|208431911|gb|ACI26782.1| pantoate-beta-alanine ligase [Helicobacter pylori G27]
          Length = 276

 Score = 40.9 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + EK+G SA+    F  +       +  Q++ +
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKLGVSAV----FAPKIGEMYPYEIEQRLKL 106


>gi|153951226|ref|YP_001398890.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938672|gb|ABS43413.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 386

 Score = 40.9 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 63/171 (36%), Gaps = 18/171 (10%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           E  Q + N+L    +   + NFD +H  H  +    I  A+     V+ F         +
Sbjct: 137 ENFQQIKNNLNAQKITAIVSNFDPLHRAHERMFRWTIDKAD----LVVIF---LVESFDA 189

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   F L    +++ I   +    +  +      +  A+ +    ++ ++ + L    ++
Sbjct: 190 NGFEFELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIAKSLGCTKLV 247

Query: 123 TGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
            G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 248 VGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|331645407|ref|ZP_08346511.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli M605]
 gi|331045569|gb|EGI17695.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli M605]
          Length = 145

 Score = 40.9 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 13  KTVITFGTFDVFHVGHLRLLQRARTLGEQLLVGV---SSDALNIAKKGRAPVY--PQDDR 67

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 68  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYSADILVMGDDW 107


>gi|331650065|ref|ZP_08351138.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli M605]
 gi|330908379|gb|EGH36898.1| nicotinamide-nucleotide adenylyltransferase, NadR family /
           Ribosylnicotinamide kinase [Escherichia coli AA86]
 gi|331041010|gb|EGI13167.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli M605]
          Length = 342

 Score = 40.9 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 54/185 (29%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + I  
Sbjct: 16  LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRFPQATILV 75

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 76  LTP-----ELVARYNLPAIPHNDADADI----HRHYVATLCLQVLRCRPHAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G               ++      +   R    +  S + IR+ + +   + A  +    
Sbjct: 127 GFANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSF 178

Query: 190 FTIES 194
                
Sbjct: 179 VRRIC 183


>gi|225017698|ref|ZP_03706890.1| hypothetical protein CLOSTMETH_01627 [Clostridium methylpentosum
           DSM 5476]
 gi|224949491|gb|EEG30700.1| hypothetical protein CLOSTMETH_01627 [Clostridium methylpentosum
           DSM 5476]
          Length = 286

 Score = 40.9 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 33/172 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++ +A +  +   ++V     +P     S             
Sbjct: 25  GLVPTMGY---LHEGHQSLIARAARENDRVVVSVFV---NPIQFGPSEDLESYPRDFERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL---------------------E 117
             + EK G   +    F  E +   AE F   V ++ L                     +
Sbjct: 79  CTLCEKTGADLV----FHPEASEMYAENFCTYVDMDRLTKGLCGASRPVHFRGVCTVVSK 134

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
           +  ++T  +  FG+  A    ++++           +    +R       SS
Sbjct: 135 LFHIVTPDRAYFGQKDAQQLAVIKRMVRDLSMDVEIVGCPIIREPDGLAKSS 186


>gi|330828206|ref|YP_004391158.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase /D-beta-D-heptose
           1-phosphate adenylyltransferase [Aeromonas veronii B565]
 gi|328803342|gb|AEB48541.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase /D-beta-D-heptose
           1-phosphate adenylyltransferase [Aeromonas veronii B565]
          Length = 475

 Score = 40.9 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A K+ +   + V + +   R +     P+   +P   +  
Sbjct: 343 VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNT-DESVRRLKGPGRPV---NPTERRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   F  +    + ++ I ++L + L     + G  ++
Sbjct: 399 VLAALGAVDWVV--PFGED----TPQRLIAEILPDLL-----VKGGDYK 436


>gi|328953684|ref|YP_004371018.1| rfaE bifunctional protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454008|gb|AEB09837.1| rfaE bifunctional protein [Desulfobacca acetoxidans DSM 11109]
          Length = 178

 Score = 40.9 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 15/118 (12%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           + + +  K  V   G FD +H+GH   L+ A  + +   + V   N           P  
Sbjct: 22  RQVRSEGKKVVFTNGCFDLLHIGHIRYLKAARALGDFLIVGV---NNDASVRRLGKGPTR 78

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            L P   + +IL  +     ++        +  +  Q I     + L    ++ G  +
Sbjct: 79  PLVPQDERAEILAALESVDGVVL------FSEDTPLQLI-----QTLRPDVLVKGGDY 125


>gi|239623265|ref|ZP_04666296.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522231|gb|EEQ62097.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 140

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 26/156 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  +LE+A +      + V +       ++        + P   + +I+
Sbjct: 9   TTGTFDLFHVGHLNLLERAKQQCEYLVVGVST-----DALVTQYKGRAPIIPFEDRIRII 63

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGILQ 141
             +     +            A++ + K++    +    +  G  ++       +  +  
Sbjct: 64  AALKCVNEVI-----------AQESMDKIIAWNKIHFNVLFHGDDWK-------NTPLYN 105

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +   +       +D +    ++ +SS +IR  + K 
Sbjct: 106 ETERQLQQKG--VDCIYFPYTKSISSRDIRERIEKK 139


>gi|148271997|ref|YP_001221558.1| glycerol-3-phosphate cytidylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147829927|emb|CAN00852.1| glycerol-3-phosphate cytidylyltransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 165

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 36/157 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  IL+ A    +     V+S       +++ +  I  + P + + +I   
Sbjct: 9   GAFDLFHVGHLNILKHAKSRCDFLIAGVVS-----DEMLELNKGITPVVPLAERLEI--- 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK---TVITGTKFRF-GKDRAGDR--G 138
                             S   ++ +   E L  K       G    F G D  G     
Sbjct: 61  -----------------VSHISYVDQARAETLPDKVDTWREVGFDVFFKGDDWRGTPKGE 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L+      G   V+        +   SS+ +R AL 
Sbjct: 104 RLEAEFAAVGVEVVYFP-----YTMHTSSTRLRRALD 135


>gi|18977488|ref|NP_578845.1| glycerol-3-phosphate cytidyltransferase [Pyrococcus furiosus DSM
           3638]
 gi|74552050|sp|Q8U1T9|RIBL_PYRFU RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|18893189|gb|AAL81240.1| glycerol-3-phosphate cytidyltransferase [Pyrococcus furiosus DSM
           3638]
          Length = 148

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 22/155 (14%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           FD +H+GH   L+ A ++ +   + V     H  T+ +       ++P   + ++L+ + 
Sbjct: 15  FDILHVGHVHFLKMAKELGDELIVIVA----HDETVKRRKGRPP-INPAEDRAELLKSIR 69

Query: 87  -FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
               ++             E  I   L++ L+   +  G    F          L+KR  
Sbjct: 70  YVDDVVI--------GEPGEISID--LIKRLKPDVIALGPDQDFSC------EELKKRLR 113

Query: 146 KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           K G +   I      KS    +S I   + +    
Sbjct: 114 KEGINAEVIRLPYLYKSDRAKTSKIIQRIIETFCE 148


>gi|194333350|ref|YP_002015210.1| pantoate--beta-alanine ligase [Prosthecochloris aestuarii DSM 271]
 gi|238693319|sp|B4S5G6|PANC_PROA2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|194311168|gb|ACF45563.1| pantoate/beta-alanine ligase [Prosthecochloris aestuarii DSM 271]
          Length = 288

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 43/201 (21%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  N    Q++  +L+        V+ +G    +H GH  +++ A      +   +L+
Sbjct: 1   MQIITNPREMQNIAENLRMKHQLIAVVMTMG---ALHEGHLSLIKLAK---QQAGTVILT 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++        P      +        L    F  + +    E F  +  + 
Sbjct: 55  IFVNPAQFGENEDFHCYPRPFEKDSSMARAAEVDYL----FAPDASMMYPEGF--QTGIH 108

Query: 115 WLEVKTVITGT---KFR--------------------FGKDRAGDRGILQKRGEKYGFHT 151
              V  ++ G                           FG+  A    ++++         
Sbjct: 109 NGPVAAILEGEHRPDHFNGVSTVVLKLMMICKAHIAVFGEKDAQQLAVIKRMTNDLNIDI 168

Query: 152 VFIDE--LRNNKSQIVSSSNI 170
             ++   LR++    +SS NI
Sbjct: 169 RILEAPLLRDDDGVAISSRNI 189


>gi|308270850|emb|CBX27460.1| Glycerol-3-phosphate cytidylyltransferase [uncultured
           Desulfobacterium sp.]
          Length = 131

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 16/112 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +K  V+  G FD  H+GH  ILE+A K  N   + V +         +     F      
Sbjct: 1   MKERVITFGTFDVFHVGHLRILERARKFGNYLMVGVST---DALNFSKKGRIPFY--NQD 55

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            + +I+  +     +                 +++  +   +   ++ G  +
Sbjct: 56  ERMEIISALSCVDEVF----------LEESLELKRHYINIYKADVLVMGDDW 97


>gi|153217251|ref|ZP_01951015.1| sugar kinase, pfkB family [Vibrio cholerae 1587]
 gi|124113722|gb|EAY32542.1| sugar kinase, pfkB family [Vibrio cholerae 1587]
          Length = 471

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|121730104|ref|ZP_01682506.1| sugar kinase, pfkB family [Vibrio cholerae V52]
 gi|254291637|ref|ZP_04962425.1| sugar kinase, pfkB family [Vibrio cholerae AM-19226]
 gi|262190187|ref|ZP_06048466.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae CT 5369-93]
 gi|121628151|gb|EAX60682.1| sugar kinase, pfkB family [Vibrio cholerae V52]
 gi|150422409|gb|EDN14368.1| sugar kinase, pfkB family [Vibrio cholerae AM-19226]
 gi|262033930|gb|EEY52391.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae CT 5369-93]
          Length = 476

 Score = 40.9 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|27467333|ref|NP_763970.1| teichoic acid biosynthesis protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57866200|ref|YP_187896.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis RP62A]
 gi|242242006|ref|ZP_04796451.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis W23144]
 gi|251810072|ref|ZP_04824545.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282874896|ref|ZP_06283771.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis SK135]
 gi|293368099|ref|ZP_06614731.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314876|gb|AAO04012.1|AE016745_111 teichoic acid biosynthesis protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636858|gb|AAW53646.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis RP62A]
 gi|242234568|gb|EES36880.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis W23144]
 gi|251806416|gb|EES59073.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281296224|gb|EFA88743.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis SK135]
 gi|291317789|gb|EFE58203.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|319401284|gb|EFV89496.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis FRI909]
 gi|329723118|gb|EGG59650.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis VCU144]
 gi|329733330|gb|EGG69665.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis VCU045]
 gi|329734096|gb|EGG70415.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis VCU028]
          Length = 132

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKNKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   V+  +V   + G  +       G+  
Sbjct: 58  MLESIRYVDLVI-----------PEEGWGQKEKDVDRFDVDVFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+ + E           +  N+++ +S++ I+  L    
Sbjct: 101 FLKDKCEV----------IYLNRTEGISTTKIKQELYGKD 130


>gi|56963831|ref|YP_175562.1| pantoate--beta-alanine ligase [Bacillus clausii KSM-K16]
 gi|78099037|sp|Q5WGA4|PANC_BACSK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|56910074|dbj|BAD64601.1| pantoate--beta-alanine ligase [Bacillus clausii KSM-K16]
          Length = 302

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 30/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++    +  +   + V+S   +P                     + E+ G   
Sbjct: 33  LHGGHQSLVRACAQTCD---LVVVSIYVNPLQFGPHEDYHEYPRQLEKDRVLAEEAGCDV 89

Query: 90  LIRYKFTLETANYSAEQFIQKVLVE--------------WLEVKTVI------TGTKFR- 128
           L       E      + + Q V V+              +  V TV+          F  
Sbjct: 90  LFC-PTDEEIY---PDGYTQTVHVKQGANVLCGKSRPGHFDGVATVVLKLFMLVQPDFAF 145

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
           FG+  A    I+++  +++      +    +R +     SS
Sbjct: 146 FGEKDAQQVAIIKQLVKEFFLPVTIVACPTVREDDGLAKSS 186


>gi|228984719|ref|ZP_04144891.1| Pantothenate synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774917|gb|EEM23311.1| Pantothenate synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 282

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 76/236 (32%), Gaps = 43/236 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIVTTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANY-SAEQFIQKVL 112
              +P      +  +        +++ + ++ G   L    F         AEQ     +
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAEQTTTVAV 109

Query: 113 VEW--------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           V+                     +++  +   T+  FG   A    +++     +     
Sbjct: 110 VKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNIPVT 169

Query: 153 FIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +    +R       SS N+   L++     A HL       +  +  GE+    +
Sbjct: 170 IVPVDIVREEDGLAKSSRNV--YLSQAEREEAPHLYRSLCVAKDRIEAGERNAEII 223


>gi|324325656|gb|ADY20916.1| pantoate--beta-alanine ligase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 282

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + + ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIINTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVAIVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+   L+      A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNV--YLSPEEREEAPHLYRSLCIAKERIETGERNAEII 223


>gi|298674993|ref|YP_003726743.1| cytidyltransferase-like domain-containing protein [Methanohalobium
           evestigatum Z-7303]
 gi|327488404|sp|D7E8Z9|RIBL_METEZ RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|298287981|gb|ADI73947.1| cytidyltransferase-related domain protein [Methanohalobium
           evestigatum Z-7303]
          Length = 150

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 23/157 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +H GH   L +A K+ N   + V       R  +    P   + P + +  
Sbjct: 15  VLATGTFDLLHPGHLHYLSEARKLGNELYVIV------ARESMIKHKPKPVI-PENQRVT 67

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++  +           ++ A   +E  I +  ++ ++   +  G   +F  D       +
Sbjct: 68  MVNSLDV---------VDKAVLGSETNIYE-PIKNIKPDVITIGYDQKFSSDS------I 111

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +K  E+ G +   +   + +   + SS  I   + + 
Sbjct: 112 EKNLEELGINAKVVRINKLSDCSLCSSGKIIDRILER 148


>gi|256845806|ref|ZP_05551264.1| citrate (Pro-3S)-lyase] ligase [Fusobacterium sp. 3_1_36A2]
 gi|256719365|gb|EEU32920.1| citrate (Pro-3S)-lyase] ligase [Fusobacterium sp. 3_1_36A2]
          Length = 345

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A+   +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKALSENDILHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIEVFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      + +   +   +  +S+S +R  +  G++ +  +L
Sbjct: 271 MLKKLPE-NNIECIVVPRKKYLDNV-ISASTVRQIIKNGNLEDLKNL 315


>gi|153827675|ref|ZP_01980342.1| sugar kinase, pfkB family [Vibrio cholerae MZO-2]
 gi|149737851|gb|EDM52756.1| sugar kinase, pfkB family [Vibrio cholerae MZO-2]
          Length = 476

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 434 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 471


>gi|229195841|ref|ZP_04322600.1| Pantothenate synthetase [Bacillus cereus m1293]
 gi|228587614|gb|EEK45673.1| Pantothenate synthetase [Bacillus cereus m1293]
          Length = 282

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + + ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIINTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVAIVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+   L+      A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNV--YLSPEEREEAPHLYRSLCIAKERIETGERNAEII 223


>gi|262282765|ref|ZP_06060533.1| phosphopantetheine adenylyltransferase [Streptococcus sp.
           2_1_36FAA]
 gi|262262056|gb|EEY80754.1| phosphopantetheine adenylyltransferase [Streptococcus sp.
           2_1_36FAA]
          Length = 164

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 45/151 (29%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  ++E+A ++ +   + +                 F +     +      
Sbjct: 10  GSFDPITKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFIIEARERIVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +            +++  +  ++   L  K  + G +     D   D        
Sbjct: 61  QHLDNVEVI---------TSQNELAVIVARRLGAKAFVRGLRNSQDLDYEADMTF---FN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +       I  L     + +SSS IR  + 
Sbjct: 109 RELAGELETIFLLSKPAYRHISSSRIRELIA 139


>gi|260432114|ref|ZP_05786085.1| pantoate--beta-alanine ligase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415942|gb|EEX09201.1| pantoate--beta-alanine ligase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 283

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 70/247 (28%), Gaps = 40/247 (16%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLSFN 56
           +  ++   ++     +     IG    +      H GH  + + A    +     +++  
Sbjct: 5   ILRSLSELRAKTRAWRRAGQTIGV---VPTMGALHQGHLSLAQAARADCDR---VIVTIF 58

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK--------F--TLETANYSAEQ 106
            +P                      L  +G  A+            F  T+  A  +   
Sbjct: 59  VNPTQFNNPEDLAKYPRTEQDDAAKLAPLGVDAIYVPDPDQIYPDGFATTVSVAGLTDVM 118

Query: 107 FIQKVLVEWLEVKTVIT-------GTKFRFGKDRAGDRGILQKRGEKYG--FHTVFIDEL 157
             +     +  V TV+          +  FG+       ++++           +    +
Sbjct: 119 EGEFRPGHFDGVATVVAKLFLQTQADRAYFGEKDYQQLMVVRRMARDLDIPIEVIGCPTV 178

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSP 217
           R      +SS N+R  L++  +   A L      +   +  G      +G        + 
Sbjct: 179 REPSGLAMSSRNLR--LSEQGLATGARLHAVMQDMAGQLAQGAAFADLVG-------PAR 229

Query: 218 DILLKEG 224
           D LL  G
Sbjct: 230 DTLLAAG 236


>gi|229524422|ref|ZP_04413827.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae bv. albensis VL426]
 gi|229338003|gb|EEO03020.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae bv. albensis VL426]
          Length = 281

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 134 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 192

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 193 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 238

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 239 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 276


>gi|218441853|ref|YP_002380182.1| cytidyltransferase-related domain protein [Cyanothece sp. PCC 7424]
 gi|218174581|gb|ACK73314.1| cytidyltransferase-related domain protein [Cyanothece sp. PCC 7424]
          Length = 163

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 1   MHVFHNIEINQSL---PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V+   E+ +++   P   +  V   G FD +H+GH   L+ A  +     + +     
Sbjct: 1   MTVYSLNELERAIALDPEQWRPLVFTNGCFDLLHVGHVRYLKSAKSLGKTLIVGL----N 56

Query: 58  HPRTI--IQSSS---PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKV 111
             R++  I+      P   L P + + ++L  +     +I           +A++ I+ +
Sbjct: 57  SDRSVNQIKPDKEGYPSRPLIPEAQRAEVLGALKWVDGVII------FQETTAQRVIEVL 110

Query: 112 LVEWLEVKTVITGTKFRFG 130
             +       + G  +   
Sbjct: 111 KPDIY-----VKGGDYTLS 124


>gi|318061555|ref|ZP_07980276.1| pantoate--beta-alanine ligase [Streptomyces sp. SA3_actG]
          Length = 336

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 25/193 (12%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P   +  V+ +G    +H GH  ++ +A  +A      V++   +P              
Sbjct: 51  PAGRRALVMTMG---ALHEGHASLVREARALAGPEGQVVVTVFVNPLQFGAGEDLDRYPR 107

Query: 74  PPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKVLV----EWLEVKTVIT 123
                  I    G   ++       Y         SA    +++         +    + 
Sbjct: 108 SLEADLDIAGSAGADHVLAPSVDEVYPGGAPEVRISAGPMGERLEGASRPGHFDGMLTVV 167

Query: 124 GTKFR--------FGKDRAGDRGILQKRGE--KYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           G  F         FG+  A    ++++      +G   V +   R +     SS N    
Sbjct: 168 GKMFHLVRPDLALFGQKDAQQLALVRRMVRDLAFGIEIVSVPTARESDGLARSSRN--RY 225

Query: 174 LTKGHVLNAAHLL 186
           L++    +A  L 
Sbjct: 226 LSEDERRSALALS 238


>gi|302535171|ref|ZP_07287513.1| pantoate-beta-alanine ligase [Streptomyces sp. C]
 gi|302444066|gb|EFL15882.1| pantoate-beta-alanine ligase [Streptomyces sp. C]
          Length = 335

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 32/191 (16%)

Query: 2   HVFHNIEINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
            + +  E    LP   +  VV  +G    +H GH  ++  A +        V++   +P 
Sbjct: 6   QLLNTAEELHELPRAGRRAVVMTMG---ALHEGHATLIRTAREEVGPDGQVVVTVFVNPL 62

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAE--------------- 105
               +               + E  G  A+              +               
Sbjct: 63  QFGANEDLDRYPRTLDADLAVSEGAGADAVFAPSVDEVYPGGDPQVRITAGPMGERLEGA 122

Query: 106 ------QFIQKVLVEWLEVKTVITGTKFR-FGKDRAGDRGILQKRGEKYGF--HTVFIDE 156
                   +  V+ + L +           FG+  A    ++++      F    V +  
Sbjct: 123 TRPGHFDGMLTVVAKLLHLTR----PDLALFGQKDAQQLALIRRMVTDLNFPVEVVGVAT 178

Query: 157 LRNNKSQIVSS 167
           +R +    +SS
Sbjct: 179 VREDDGLALSS 189


>gi|261840051|gb|ACX99816.1| hypothetical protein HPKB_1269 [Helicobacter pylori 52]
          Length = 171

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q + +   + + VL     P            L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLGLLPFAKLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 69  LK--GMDRVLLSDFEIKQERAVPTIESVIYFQKLYRPQTLYLVIGADCLRHLSSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 169


>gi|57642063|ref|YP_184541.1| phosphopantetheine adenylyltransferase [Thermococcus kodakarensis
           KOD1]
 gi|73918900|sp|Q5JHE8|COAD_PYRKO RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|57160387|dbj|BAD86317.1| phosphopantetheine adenylyltransferase [Thermococcus kodakarensis
           KOD1]
          Length = 165

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 34/166 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I  L+ +     ++++      + P   + K
Sbjct: 8   VVVGGTFDRLHLGHKALLRKAFEVGKIVYIG-LTSD----EMVRNKPYAERILPYEHRLK 62

Query: 81  ILEKM----GFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            L K     G++     K      F     +  A    ++     L V            
Sbjct: 63  DLLKFIEVNGYTNYRIIKIHTAIGFADSMKSLEAIVVSEETYKGALIV------------ 110

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +RA +   L+          V I  +++     +SSS IR  L  
Sbjct: 111 -NRAREEKGLKPL------DIVTIPIIKSYLGDKISSSLIRAGLID 149


>gi|313888664|ref|ZP_07822329.1| [citrate (pro-3S)-lyase] ligase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845393|gb|EFR32789.1| [citrate (pro-3S)-lyase] ligase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 330

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 110 KVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           +   + L +K    G++ R    +  +   +++   +YG   V I    +  ++I+S+S 
Sbjct: 235 RYFAKALNIKKRFVGSEDRDVVTKNYN-ETMERILPEYGLEVVEIPR-TSLDNEIISASK 292

Query: 170 IRTALTKGHVLNAAHLLG 187
           +R  L +     A   L 
Sbjct: 293 VRGLLKERKFEEAYKFLP 310


>gi|242372876|ref|ZP_04818450.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis M23864:W1]
 gi|314932955|ref|ZP_07840321.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus caprae
           C87]
 gi|242349360|gb|EES40961.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           epidermidis M23864:W1]
 gi|313654274|gb|EFS18030.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus caprae
           C87]
          Length = 132

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKNKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   V+  +V   + G  +       G+  
Sbjct: 58  MLESIRYVDLVI-----------PEEGWGQKEKDVDRFDVDVFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+ + E           +  N+++ +S++ I+  L    
Sbjct: 101 FLKDKCEV----------IYLNRTEGISTTKIKQELYGKD 130


>gi|296330213|ref|ZP_06872694.1| hypothetical protein BSU6633_03892 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676182|ref|YP_003867854.1| hypothetical protein BSUW23_17550 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|32171684|sp|Q8RKI6|TARD_BACPZ RecName: Full=Glycerol-3-phosphate cytidylyltransferase; Short=GCT;
           Short=Gro-PCT; AltName: Full=CDP-glycerol
           pyrophosphorylase
 gi|19571191|emb|CAC86112.1| putative glycerol 3-phosphate cytidylyltransferase [Bacillus
           subtilis]
 gi|219937612|emb|CAJ97399.1| putative glycerol-3-phosphate cytidylyltransferase [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296152481|gb|EFG93349.1| hypothetical protein BSU6633_03892 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414426|gb|ADM39545.1| hypothetical protein BSUW23_17550 [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 129

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 55/157 (35%), Gaps = 33/157 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H GH  +LE+A  + +   + + +                +      ++ 
Sbjct: 4   VITYGTFDLFHYGHMKLLERAKNLGDYLIVGLSTDE------FNLQKQKKSHHSYEHRKF 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE      +              + + QK+  ++  ++ T + G  ++      G    
Sbjct: 58  ILET--IDLVNEV--------IPEKNWEQKISDIQKHDIDTFVIGDDWK------GKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L++         +++      ++  +S++ I+  +  
Sbjct: 102 LKEYC-----EVIYLP-----RTDGISTTQIKKDMAS 128


>gi|322433806|ref|YP_004216018.1| pantoate/beta-alanine ligase [Acidobacterium sp. MP5ACTX9]
 gi|321161533|gb|ADW67238.1| pantoate/beta-alanine ligase [Acidobacterium sp. MP5ACTX9]
          Length = 305

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 49/202 (24%), Gaps = 45/202 (22%)

Query: 1   MHVFHNIEINQSLPNHLK-------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL 53
           M +   I   +      +       G V  +G    +H GH   L      +      V+
Sbjct: 1   MQILKTIADMRQATTAARLASNAPIGLVPTMG---ALHEGH---LSLVRAASQQCGTVVV 54

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           S   +P                     +LE+ G   +    F               ++ 
Sbjct: 55  SIFVNPTQFAPGEDLDRYPRTLEADLALLEQEGVDLV----FVPSAREMYPNGIAATIVS 110

Query: 114 EWLEVKTV-------------------------ITGTKFR-FGKDRAGDRGILQKRGEKY 147
             +EV  +                         I G     FG   A    +L+      
Sbjct: 111 THVEVPEISDRLDGLSRPGHFRAVATVVAKLFHIVGPDLAFFGAKDAVQVAVLRAMVRDL 170

Query: 148 GF--HTVFIDELRNNKSQIVSS 167
            F    V    +R+     +SS
Sbjct: 171 DFPLRIVVCPTVRDADGLALSS 192


>gi|188995870|ref|YP_001930122.1| nicotinic acid mononucleotide adenylyltransferase [Porphyromonas
           gingivalis ATCC 33277]
 gi|229485621|sp|B2RMD0|NADD_PORG3 RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|188595550|dbj|BAG34525.1| probable nicotinamide-nucleotide adenylyltransferase [Porphyromonas
           gingivalis ATCC 33277]
          Length = 197

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 35/177 (19%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
            G+F+ +H+GH  +     +      +    F P P   +        L P  ++ +++E
Sbjct: 7   FGSFNPMHIGHLALANYLTEYTPIRQLW---FVPSP---LNPLKNTQELLPYDLRCELIE 60

Query: 84  KMGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVK---------TVITGTKFRFGKD 132
           +         +  +       E+ +      +  L             ++ G       D
Sbjct: 61  QA-------IRKDIRFQVLRIEELLPSPHYTIRTLRALSMLYPHHRFALLIGADNWQSFD 113

Query: 133 RAGDRGILQKRGE-----KYGFHT--VFIDE----LRNNKSQIVSSSNIRTALTKGH 178
           R  D   L  + E     ++G+      +      + +     +SS+ IRT++ +G 
Sbjct: 114 RWKDHHRLMAKYELIIYPRFGYEVNDTTLPTGCRYIHDAPRIEISSTQIRTSILEGK 170


>gi|254302728|ref|ZP_04970086.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322920|gb|EDK88170.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 345

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKASSENDVLHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIEVFTKIAKV--LNINKRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      + +   + + +  +S+S +R  +  G++ +  +L
Sbjct: 271 MLKKLPE-NNIECIVVPRKKYSDNV-ISASTVRQIIKNGNLEDLKNL 315


>gi|228917873|ref|ZP_04081410.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228841809|gb|EEM86919.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 130

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 58/154 (37%), Gaps = 31/154 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  ++ +A  + +   + + +          +     +      ++ 
Sbjct: 4   ILTYGTFDLLHYGHINLVRRAKDLGDYLIVGLSTDE------FNALKGKESYFKFEERKM 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE      +      L  +  + EQ I+ ++    E+   + G  +       G    L
Sbjct: 58  LLES--IRYV-----DLVISENTWEQKIEDII--KYEIDVFVMGDDW------EGKFDFL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           ++         V++      +++ +S++ I++ L
Sbjct: 103 KEYC-----EVVYLP-----RTEDISTTQIKSEL 126


>gi|70944905|ref|XP_742333.1| ethanolamine-phosphate cytidylyltransferase [Plasmodium chabaudi
           chabaudi]
 gi|56521251|emb|CAH76551.1| ethanolamine-phosphate cytidylyltransferase, putative [Plasmodium
           chabaudi chabaudi]
          Length = 345

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  HLGH  ++E A K+ +   + V S        ++ +    T S       +L  
Sbjct: 186 GSFDMFHLGHLKMIENARKLGDYLLVGVYSDE--TVRKLKGNHFPVT-SVLERTLTVLAM 242

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFR-FGKD 132
            G   ++            A   I +  ++  ++ TV+ G      +  FG D
Sbjct: 243 KGVDDVVIC----------APWVITESFIKRFQIDTVVRGSIADYNYSNFGPD 285


>gi|322834359|ref|YP_004214386.1| pantoate/beta-alanine ligase [Rahnella sp. Y9602]
 gi|321169560|gb|ADW75259.1| pantoate/beta-alanine ligase [Rahnella sp. Y9602]
          Length = 284

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 65/224 (29%), Gaps = 37/224 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E+A    +   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEEAKARGD---VVVVSIFVNPMQFERPDDLERYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            K G   +    F    A    +    +  V+   + T++ G                  
Sbjct: 83  NKRGVDLV----FAPSPAEVYPKGLATQTQVDVPVISTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +L+   E  G     V +  +R      +SS N  + LT  
Sbjct: 139 NLVQPQVACFGQKDFQQLALLRTMVEDMGYDIEIVGVSIVRAKDGLALSSRN--SYLTAE 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
               A  L      +   +  GE+    +   TA          
Sbjct: 197 ERKLAPQLNKIMNALAERLSQGERHVDEMLQETAQQLREAGFTP 240


>gi|228475361|ref|ZP_04060082.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus hominis
           SK119]
 gi|314937043|ref|ZP_07844390.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus hominis
           subsp. hominis C80]
 gi|228270601|gb|EEK12026.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus hominis
           SK119]
 gi|313655662|gb|EFS19407.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus hominis
           subsp. hominis C80]
          Length = 132

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKNKKSYYDFEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E     ++  V+  +V   + G  +       G  
Sbjct: 58  MLESIRYVDLVI------------PEDGWGQKETDVDRYDVDVFVMGHDW------EGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ + E           +   +++ +S++ I+  L    
Sbjct: 100 DFLKDKCEV----------VYLKRTEGISTTKIKQELYGKD 130


>gi|170177510|gb|ACB10250.1| putative glycerol-3-phosphate cytidyltransferase [Campylobacter
           coli]
          Length = 138

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G +D  H+GH  +L+ A  + +   + V + +     ++Q  +    + P S + +I+
Sbjct: 7   TSGVYDLFHIGHLNLLKNAKGLCDKLIVGV-TID----ELVQYKNKKSVI-PFSERIEIV 60

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
             +               A    E   +  + E L    +  G  +        +  I++
Sbjct: 61  RSIKYVD-----------AAIPQENIDKYQMWEKLHFDVLFVGDDWF----NTPNWNIME 105

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           ++ +K     ++        ++  SS+ I   L  
Sbjct: 106 EKFKKVNVRVIYFP-----YTKGTSSTLINETLKN 135


>gi|261400183|ref|ZP_05986308.1| pantoate--beta-alanine ligase [Neisseria lactamica ATCC 23970]
 gi|269210183|gb|EEZ76638.1| pantoate--beta-alanine ligase [Neisseria lactamica ATCC 23970]
          Length = 278

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H I+  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTIQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFI 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 LE  G + +           +  ++ +E  N   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVIFAPDEKELYPNVEQRYNVEPPNLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDEL 157
             +     +  V TV+             FGK       +++   E   F    V +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTEDLNFDIEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RAADGLALSSRN--QYLSVEERAEAPRLY 200


>gi|218884059|ref|YP_002428441.1| Glycerol-3-phosphate cytidylyltransferase [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765675|gb|ACL11074.1| Glycerol-3-phosphate cytidylyltransferase [Desulfurococcus
           kamchatkensis 1221n]
          Length = 229

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 26/158 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFTLSPP 75
           +  V+  G+F+ +H GH  +L++A ++       V+S N   R     +   PI      
Sbjct: 91  RPRVLVAGSFEFLHPGHIYLLKRAWEL--GEVYVVVSRN---RNFTRFKGREPI-----M 140

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             +E++L       +     +        E F++ ++   L+   V+ G           
Sbjct: 141 DEKERLLIVENVKYV-----SKAIMG-DEEDFLKPIV--ELKPDIVLLGPDQWI------ 186

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               L+   EK G   V +++L +   +  SS  I   
Sbjct: 187 QPDELKSLLEKKGLSNVRVEKLESRIGEWSSSRIIERI 224


>gi|124360293|gb|ABN08306.1| Cytidylyltransferase [Medicago truncatula]
          Length = 246

 Score = 40.5 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     II +  P    +P   +  ++  
Sbjct: 58  GCFDMMHYGHCNALRQARALGDQLIVGVVSDD----EIIANKGPPV--TPLHERLIMVNA 111

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E      +++    ++   +   +  GT       +AG    +
Sbjct: 112 VKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYAHAKKAGRYKQI 171

Query: 141 QK 142
           ++
Sbjct: 172 KR 173


>gi|332522996|ref|ZP_08399248.1| pantetheine-phosphate adenylyltransferase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332314260|gb|EGJ27245.1| pantetheine-phosphate adenylyltransferase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 163

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 33/157 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+E+A  + ++  + V  FNP+                  ++ ++LE+
Sbjct: 10  GSFDPVTNGHMDIIERASHLFDHLYVGVF-FNPNKEGFF----------SLDMRVRMLEE 58

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRG 138
                  +            SA+  +   L + L+V  ++ G    T F +  +      
Sbjct: 59  ALTHLDNVSVV---------SAQDSLAVALAKQLDVTHLVRGLRNPTDFEYESN------ 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L+    +       +  +  N    +SSS ++  + 
Sbjct: 104 -LEYFNHRLEPSIDTVYFISRNIMSPISSSRVKELVH 139


>gi|299473581|emb|CBN77976.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 457

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 22/180 (12%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPR 60
             F+  ++  S+P      V   G FD +H GH  +L  A  +     +TV ++ +    
Sbjct: 286 EYFYAEDVLASIPTF--SSVACGGTFDRLHGGHKKLLTLAASMCEGGTLTVGVTSD---- 339

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVK 119
           +++++ S    LS    +       G         T      + +   +   + +     
Sbjct: 340 SMLKAKSNAKMLSSLPERL-----AGV--------TDFLRTLNPQMRTRVEGITDPFGPP 386

Query: 120 TVITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            V           +       + +   + GF  + +   R   +  +SSS +R A  +  
Sbjct: 387 AVEEAFDAIVVSSETVLGAEKINELRAQKGFRPLAVAVTRRLAAATLSSSYLRRAAEEKQ 446


>gi|293189945|ref|ZP_06608625.1| protein HldE [Actinomyces odontolyticus F0309]
 gi|292821164|gb|EFF80111.1| protein HldE [Actinomyces odontolyticus F0309]
          Length = 165

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 24/157 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH  IL  A +  +   + V + +      +        + P   +  ++  
Sbjct: 17  GGFDMFHQGHLNILRAARERCDRLVVGV-TSD----EALIRMKGRAPVIPLKERCDLVSS 71

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
           + F   +      +          +++         +  G  ++     A     L+   
Sbjct: 72  LRFVDAVVVDLDQD----------KRLAWRLQPFDVLFKGDDWKDTPKGAA----LEAEM 117

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            + G   V++       +   SS+ +R  +      +
Sbjct: 118 AEVGARVVYLP-----YTPSTSSTKLRRFIAPEDFSD 149


>gi|298530899|ref|ZP_07018300.1| phosphoenolpyruvate phosphomutase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298508922|gb|EFI32827.1| phosphoenolpyruvate phosphomutase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 433

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 28  DGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           D +H GH  I+++A ++     I +L+        I     +  ++    +E +    G 
Sbjct: 12  DLVHPGHLNIIKKASELG-EVIIGLLT-----DEAIAGYKRLPHMTFEQRREVVENIKGV 65

Query: 88  SALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
           S ++             +  +  V  +E L    V+ G  +R G  +   + ++ K   +
Sbjct: 66  SRVV------------PQYTLDYVPNLEKLRPDFVVHGDDWREGVQKETRQRVIDKL-AR 112

Query: 147 YGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +G   + +       +Q +SS+ +RT L +
Sbjct: 113 WGGQLIEVP-----YTQGISSTQLRTTLKE 137


>gi|307155361|ref|YP_003890745.1| pantoate/beta-alanine ligase [Cyanothece sp. PCC 7822]
 gi|306985589|gb|ADN17470.1| pantoate/beta-alanine ligase [Cyanothece sp. PCC 7822]
          Length = 512

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 1  MHVFHNIEINQSL-----PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +F  +   +S       N   G V  +G    +H+GH  ++E+A        I V+S 
Sbjct: 1  MRLFTTVAGLRSYLKSQRDNKTVGLVPTMG---ALHIGHQSLIERARVETE---IVVVSI 54

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
            +P     +              ++ EK+G   + 
Sbjct: 55 FVNPLQFTPTEDLQKYPRQLQQDSELCEKLGVDVIF 90


>gi|255570653|ref|XP_002526281.1| conserved hypothetical protein [Ricinus communis]
 gi|223534362|gb|EEF36070.1| conserved hypothetical protein [Ricinus communis]
          Length = 385

 Score = 40.5 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 26/168 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+F+ +H GH  ++E A  I  N       F     + + +  P  ++S    + K  E+
Sbjct: 220 GSFNPLHEGHLKLMEVAASICGNGYPC---FE---LSAVNADKPPLSVSQIKDRVKQFEE 273

Query: 85  MGFSALI-RYKFTLETANY---SAEQFIQKVLVEWLEVKT----------VITG---TKF 127
           +G + ++    F  + A     SA           +  K           ++ G   T  
Sbjct: 274 VGKTVIVSNQPFFYKKAELFPGSAFVIGADTAARLINTKYYDGDYGKMIEILMGCKRTGC 333

Query: 128 RF---GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            F   G++  G   +L+          +F+          +SS++IR 
Sbjct: 334 TFLVGGRNVDGVFKVLEDFDIPEVLKDMFVPIPPEKFRMDISSTDIRE 381


>gi|282862613|ref|ZP_06271674.1| rfaE bifunctional protein [Streptomyces sp. ACTE]
 gi|282562299|gb|EFB67840.1| rfaE bifunctional protein [Streptomyces sp. ACTE]
          Length = 478

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 12/97 (12%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +L+ A ++ +   + V        ++ +       +   +
Sbjct: 330 GGTVVAAGGCFDLLHAGHVELLQAARRVGDCLVVCV----NSDASVRRRKGGGRPVVTAA 385

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVL 112
            + ++LE +    A++   F  +    + E+ + ++ 
Sbjct: 386 DRVRVLEALDCVDAVVV--FDED----TPERLLGELR 416


>gi|82704692|ref|XP_726658.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482162|gb|EAA18223.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 580

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 20/114 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ-EKILE 83
           G+FD  HLGH  I+E A K+ +   + + S      T+ +     F ++    +   +L 
Sbjct: 403 GSFDMFHLGHLKIIENAKKLGDYLLVGIYSDE----TVRKLKGNHFPITSVLERTLTVLA 458

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKF-RFGKD 132
             G   ++            A   I +  ++  ++ TV+ G      +  FG D
Sbjct: 459 MKGVDDVVIC----------APWVITESFIKRFQIDTVVRGSISDYNYSSFGPD 502


>gi|332672794|gb|AEE69611.1| pantoate-beta-alanine ligase [Helicobacter pylori 83]
          Length = 276

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 33/231 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIVALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK---------------FTLETANY 102
           +P     +        P      + E +G +A+   K               +  E  + 
Sbjct: 55  NPTQFGANEDFSAYPHPLEKDLALCEGLGVNAVFLPKTSEMYPYEIERRLKLYAPEFLSS 114

Query: 103 SAEQFIQKVLVEW-----LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           S E  +++   +      L++  ++  T+  FGK  A    I+Q   +            
Sbjct: 115 SLEAAVREGHFDGVVQIVLKMFHLVHPTRAYFGKKDAQQLLIIQHLVKDLLLDIEITPCE 174

Query: 157 -LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +R++ +  +SS N+   L       A  +     +I+  +  GEK    L
Sbjct: 175 IVRDDDNLALSSRNV--YLNATQRKQALAIPKALESIKQAIDKGEKACEKL 223


>gi|257095866|ref|YP_003169507.1| cytidyltransferase-like domain-containing protein [Candidatus
          Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048390|gb|ACV37578.1| cytidyltransferase-related domain protein [Candidatus
          Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 169

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 27/88 (30%)

Query: 14 PNHLKGGVVAI--------GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
          P  L   V+A+        G FD +H GH  +L QA  +   + + V          + S
Sbjct: 22 PEKLAECVLALPRPLVFTNGCFDILHRGHVTLLAQARAL--GAALVV---------ALNS 70

Query: 66 SSPIFTL--------SPPSIQEKILEKM 85
             +  L        +P + +  ++  +
Sbjct: 71 DESVKRLGKGDDRPVNPLTDRLALIAAL 98


>gi|229514063|ref|ZP_04403525.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae TMA 21]
 gi|229527043|ref|ZP_04416438.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae 12129(1)]
 gi|229335440|gb|EEO00922.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae 12129(1)]
 gi|229349244|gb|EEO14201.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio cholerae TMA 21]
          Length = 281

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 27/169 (15%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 134 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 192

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 193 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 238

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++  ++ AG + ++       G     +     N  +  S++ I  A+
Sbjct: 239 DYK-PEEIAGGKEVIAA-----GGEVKVL-----NFEEGCSTTEIIEAI 276


>gi|326522092|dbj|BAK04174.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 421

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     I  +  P    +P   + K++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDELVVGVVSDD----EITANKGPPV--TPLHERMKMVRA 115

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +  N    ++    ++   +   +  GT       +AG     
Sbjct: 116 VKWVDDVIPDAPYAITEDFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAKKAG---RY 172

Query: 141 QKRGEKYGFHTVFI 154
           ++     G  T  I
Sbjct: 173 KQIKRTEGVSTTDI 186


>gi|229029321|ref|ZP_04185409.1| Pantothenate synthetase [Bacillus cereus AH1271]
 gi|228731980|gb|EEL82874.1| Pantothenate synthetase [Bacillus cereus AH1271]
          Length = 282

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 49/239 (20%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+      G V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIVTTVQEMQQITNDLRTSGKSIGFVPTMGY---LHEGHATLLRRAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANY-SAEQFIQKVL 112
              +P      +  +        +++ + ++ G   L    F         AEQ     +
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAEQTTTVAV 109

Query: 113 VEWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGF 149
           V+      V+ G                        +  FG   A    +++     +  
Sbjct: 110 VKR---TDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVADFNI 166

Query: 150 HTVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
               +    +R       SS N+   L++     A  L       +  +  GE+    +
Sbjct: 167 PVTIVPVDIVREEDGLAKSSRNV--YLSQEEREEAPQLYRSLCIAKEKIEAGERNAEII 223


>gi|167623436|ref|YP_001673730.1| glycerol-3-phosphate cytidylyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|167353458|gb|ABZ76071.1| glycerol-3-phosphate cytidylyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 151

 Score = 40.5 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 37/161 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPS 76
             ++  G FD  H GH  + ++   + +   + V +  FN      ++  +  F      
Sbjct: 2   KTIITYGTFDLFHYGHVRLFKRLKALGDKLIVAVSTDEFN-----ALKGKAAFF---SYF 53

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I+E       ++         N  A+  I K  V    +     G  ++      G
Sbjct: 54  QRAEIVEACQYVDMVV----PETHWNQKAKD-ICKYDVSIFGM-----GDDWK------G 97

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   L    E           +  +++  +S++ I++ L +
Sbjct: 98  EFDELSMLCEV----------IYLDRTGEISTTEIKSNLAQ 128


>gi|322711840|gb|EFZ03413.1| LipA and NB-ARC domain protein [Metarhizium anisopliae ARSEF 23]
          Length = 601

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 37/116 (31%), Gaps = 19/116 (16%)

Query: 187 GYRFTIESDVIHGEKIGR-TLGFPTANMQLSPDIL--LKEGVYAIRFR----------TQ 233
            +    E  V  G       LGFPTAN+   PD +     GV+A   R            
Sbjct: 389 PFPVKFEGAVERGTGSSSAELGFPTANLSGVPDAVRTPFSGVFAAWARLLPGGRNVPDGL 448

Query: 234 DQTSYSGVANF----GRNPTMVPNGPLLLES-FIFDFSQEIYGQRCTVSFFDYLRP 284
               +  V       G  P + P   + +     FD     +G +  V    +L P
Sbjct: 449 SPDWHPAVVTIAPPRGAAPAVAPKNGVRVHVLHDFDDVA-FFGGKLAVLLMGWLHP 503


>gi|189460128|ref|ZP_03008913.1| hypothetical protein BACCOP_00764 [Bacteroides coprocola DSM 17136]
 gi|189433170|gb|EDV02155.1| hypothetical protein BACCOP_00764 [Bacteroides coprocola DSM 17136]
          Length = 281

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 39/200 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   I+  ++  + L+      G V  +G    +H GH  ++++A+   +   + V+S
Sbjct: 1   MKLIQTIQELRTELDALRKEGKTIGLVPTMG---ALHAGHASLVKRAVAEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +          K+LE+ G           +     T + +      
Sbjct: 55  DFVNPTQFNDKNDLLKYPRTLDADCKLLEECGASFVFAPSVEEIYPEPDTRQFS----YA 110

Query: 107 FIQKVLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            +  V+                     ++  T+  FG+       I+++   KY F+   
Sbjct: 111 PLDTVMEGKFRPGHFNGVCQIVSKLFLIVEPTRAYFGEKDFQQLAIIREMVRKYPFNLEI 170

Query: 154 I--DELRNNKSQIVSSSNIR 171
           +    +R      +SS N R
Sbjct: 171 VGCPIVREADGLALSSRNAR 190


>gi|46446095|ref|YP_007460.1| ADP-heptose synthase [Candidatus Protochlamydia amoebophila UWE25]
 gi|46399736|emb|CAF23185.1| probable ADP-heptose synthase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 170

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 10/93 (10%)

Query: 21  VVAI-GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           +V + G+FD +H GH  I+ +A ++ +   I  L+ +   +     + P   L     + 
Sbjct: 38  IVTLNGSFDLLHAGHLQIIYEASQLGD-VLIVALNSDESIKRYKNPNRP---LISLEYRL 93

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           +++  + F       F            + K+ 
Sbjct: 94  QMMAALEF-----VNFVTWFEEMDPCHLLSKIK 121


>gi|91787178|ref|YP_548130.1| coenzyme A biosynthesis protein [Polaromonas sp. JS666]
 gi|91696403|gb|ABE43232.1| Coenzyme A biosynthesis protein [Polaromonas sp. JS666]
          Length = 172

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 47/162 (29%), Gaps = 26/162 (16%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P       V  G FD   LGH  ++ +A K+ +   I V            ++    TL 
Sbjct: 5   PPPTPRIAVYSGTFDPFTLGHDDVVRRAGKLFDQIIIAV-----------AAAHHKKTLF 53

Query: 74  PPSIQEKILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           P   + +  +        +    F     ++ AE     VL     V        F +  
Sbjct: 54  PLQDRVEQAQAATRDIVGVRVLPFDGLIMDFCAEHGASAVLRGVRNVT------DFDY-- 105

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
                   +     K       +  L     Q +SS+ +R  
Sbjct: 106 -----EAQMAAMNRKLQPQVETVFLLPEASLQCISSTLVREI 142


>gi|257869656|ref|ZP_05649309.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus gallinarum
           EG2]
 gi|257803820|gb|EEV32642.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus gallinarum
           EG2]
          Length = 133

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 32/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A +  +   + + +                       +++
Sbjct: 4   VITYGTFDLLHYGHINLLRRAKEQGDYLIVALST-----DEFNWDEKQKKCYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             + + QKV  V+   V T + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEKNWEQKVSDVKEYHVDTFVMGDDW------AGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +Q+  +    +     E        +S++ I+  L   +
Sbjct: 102 FIQEETDAEVVYLARTPE--------ISTTQIKKDLKINN 133


>gi|77164403|ref|YP_342928.1| cytidyltransferase-related [Nitrosococcus oceani ATCC 19707]
 gi|254434961|ref|ZP_05048469.1| pantoate--beta-alanine ligase [Nitrosococcus oceani AFC27]
 gi|123594715|sp|Q3JCP8|PANC_NITOC RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|76882717|gb|ABA57398.1| pantothenate synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207091294|gb|EDZ68565.1| pantoate--beta-alanine ligase [Nitrosococcus oceani AFC27]
          Length = 286

 Score = 40.5 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   +   +S     +        V  +GN   +H GH  ++E+A ++A+     ++S
Sbjct: 1   MRVLRTVAAVRSAVEGWRASHERVALVPTMGN---LHRGHLALVERAAQLADR---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                   ++ L++ G + +    F     +   ++      VE
Sbjct: 55  IFVNPLQFNDRDDYSRYPRTFEKDQQYLDEYGVAVV----FAPSLEDIYPQRLENVTHVE 110

Query: 115 WLEVKTVITGTKFRFGKDR 133
              +  ++ G   R G  R
Sbjct: 111 VPGLSDILEGA-SRLGHFR 128


>gi|254173146|ref|ZP_04879819.1| phosphopantetheine adenylyltransferase [Thermococcus sp. AM4]
 gi|214032555|gb|EEB73384.1| phosphopantetheine adenylyltransferase [Thermococcus sp. AM4]
          Length = 158

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 28/163 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A +I     +  L+ +     +I++      + P  ++  
Sbjct: 7   VVVGGTFDRLHLGHKALLRKAFEIGRYVYVG-LTSD----EMIRNKPYAERILPYELRLA 61

Query: 81  ILEKM----GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK---DR 133
            L K     G++     K        +A  F  ++      ++ ++   +   G    +R
Sbjct: 62  DLLKFFDVNGYTNYRVIKIN------TAIGFADRMKS----LEAIVVSEETYKGALLVNR 111

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           A +   L+          V I  +++     +SSS IR  L  
Sbjct: 112 AREERGLKPL------EIVTIKLVKSRIGPKISSSLIRAGLID 148


>gi|159185762|ref|NP_357127.2| pantoate--beta-alanine ligase [Agrobacterium tumefaciens str. C58]
 gi|24638091|sp|Q8UA92|PANC_AGRT5 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|159140896|gb|AAK89912.2| pantoate--beta-alanine ligase [Agrobacterium tumefaciens str. C58]
          Length = 292

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 14/122 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +   +   +      +     IG      F  +H+GH  ++ +A    +    TV+S 
Sbjct: 1   MRLVKTVAELRDAIAAFRRAGKTIGFVPTMGF--LHIGHLTLVARAKAEND---ATVVSI 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +          +    +L++ G   L    F  +            V V  
Sbjct: 56  FVNPLQFGANEDLARYPRDLARDSALLQEAGVDIL----FAPDVTEMYPRPIQTVVDVPE 111

Query: 116 LE 117
           L 
Sbjct: 112 LG 113


>gi|260589406|ref|ZP_05855319.1| cytidylyltransferase domain protein [Blautia hansenii DSM 20583]
 gi|260540213|gb|EEX20782.1| cytidylyltransferase domain protein [Blautia hansenii DSM 20583]
          Length = 446

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +LE+A K+ +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLLHYGHIKLLERAKKLGDYLIVGVTADDFD-------KTRGKINVQQSLIER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++  +V     G+ +       G  
Sbjct: 57  IEAVRNTGLADEIIVEEY----------EGQKIDDIKKYDVDIFTVGSDW------VGCF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L++  E           +   +++ VSSS IR
Sbjct: 101 DYLKEYCEV----------IYLERTEGVSSSEIR 124


>gi|269796476|ref|YP_003315931.1| pantothenate synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098661|gb|ACZ23097.1| pantothenate synthetase [Sanguibacter keddieii DSM 10542]
          Length = 321

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P   +  V+ +G    +H GH  ++ +A ++A+     V++   +P              
Sbjct: 40  PTRRRAVVMTMG---ALHAGHLELVREARRLADE---VVVTIFVNPLQFGPGEDYDSYPR 93

Query: 74  PPSIQEKILEKMGFSALI 91
                  +L  +G   + 
Sbjct: 94  TLDADVALLASVGVDVVF 111


>gi|237747073|ref|ZP_04577553.1| ADP-heptose synthase [Oxalobacter formigenes HOxBLS]
 gi|229378424|gb|EEO28515.1| ADP-heptose synthase [Oxalobacter formigenes HOxBLS]
          Length = 159

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 6/115 (5%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            ++    +   +    K  V   G FD +H GH   L +A ++  +  + V + +   + 
Sbjct: 7   KIWDRFALPLKMARLPKPVVFTNGVFDILHRGHVTYLARARELGASLVVAVNT-DESVKR 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
           + +       ++    +  +L  +   SA++   F  +TA +   +    + V+ 
Sbjct: 66  LGKGDDRP--INSCEDRMAVLAALESVSAVVA--FDEDTAQFLVRECRPDIYVKG 116


>gi|52787498|ref|YP_093327.1| hypothetical protein BLi03818 [Bacillus licheniformis ATCC 14580]
 gi|319647983|ref|ZP_08002200.1| glycerol-3-phosphate cytidylyltransferase [Bacillus sp. BT1B_CT2]
 gi|52350000|gb|AAU42634.1| TagD [Bacillus licheniformis ATCC 14580]
 gi|317389618|gb|EFV70428.1| glycerol-3-phosphate cytidylyltransferase [Bacillus sp. BT1B_CT2]
          Length = 131

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 33/157 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 6   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKAYHSYEHRKL 59

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + +Q +Q V+   ++V   + G  +       G    
Sbjct: 60  ILETIRYVDEVIP--------EKNWDQKVQDVIDHDIDV--FVMGDDW------EGKFDF 103

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L+          V++      +++ +S++ I+  +  
Sbjct: 104 LKDYC-----EVVYLP-----RTEGISTTKIKEEIAN 130


>gi|323191527|gb|EFZ76788.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli
           RN587/1]
          Length = 134

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYRADILVMGDDW 96


>gi|308071027|ref|YP_003872632.1| glycerol-3-phosphate cytidylyltransferase [Paenibacillus polymyxa
           E681]
 gi|305860306|gb|ADM72094.1| Glycerol-3-phosphate cytidylyltransferase [Paenibacillus polymyxa
           E681]
          Length = 137

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 29/156 (18%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  +L  A  + +   + V +        + S      + P   + +I+
Sbjct: 6   TSGVFDLFHIGHLNLLRNAKSLCDKLIVGVTTDE------LVSYKYKKAVIPFEERIEIV 59

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGIL 140
             +     +I             +  + K  V + L+   +  G  +             
Sbjct: 60  RNISFVDTVI------------PQDSMDKFEVWQKLKYDVMFVGDDW---------FQNE 98

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +    +  F  V +  +    ++  SS+ +   L K
Sbjct: 99  RWDQYELQFKEVGVKIIYFPYTKSTSSTLLNETLLK 134


>gi|197117256|ref|YP_002137683.1| bifunctional D-glycero-D-mannoheptose-7-phosphate
           kinase/D-glycero-D-mannoheptose-1-phosphate
           adenylyltransferase [Geobacter bemidjiensis Bem]
 gi|226702244|sp|B5EEZ1|HLDE_GEOBB RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|197086616|gb|ACH37887.1| D-glycero-D-mannoheptose-7-phosphate kinase and
           D-glycero-D-mannoheptose-1-phosphate adenylyltransferase
           [Geobacter bemidjiensis Bem]
          Length = 487

 Score = 40.5 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 29/162 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPS 76
           K  V   G FD +H+GH   L++A  + +   I V+  N       ++       L   +
Sbjct: 352 KKVVFTNGCFDLLHVGHVKYLQKARGLGD---ILVVGLNTDASVRRLKGEKRP--LIEET 406

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  IL  +     ++   F  +             ++E L    ++ G  +       G
Sbjct: 407 ERAHILAALDCIDYVVL--FDED---------TPLKVIETLGPDILVKGGDYSI----EG 451

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             G  ++  E  G     I  +        S+S I   +   
Sbjct: 452 VVG--REVVEARGGRVELIQFV-----DGRSTSRIIEKILSS 486


>gi|317178315|dbj|BAJ56103.1| pantoate--beta-alanine ligase [Helicobacter pylori F30]
          Length = 276

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLMERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + E +G SA+    F  + +     +  Q++ +
Sbjct: 55  NPMQFGANEDFNAYPRPLEKDLALCEGLGVSAV----FLPKISEMYPYEIEQRLKL 106


>gi|317134019|ref|YP_004089930.1| cytidyltransferase-related domain protein [Ruminococcus albus 7]
 gi|315450481|gb|ADU24044.1| cytidyltransferase-related domain protein [Ruminococcus albus 7]
          Length = 424

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 32/153 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +LE+A  + +   + V S +       ++   I        + +
Sbjct: 4   VITYGTYDMLHYGHIRLLERAKALGDYLIVGVTSDDYD-----KTRGKINLQQSLMERVE 58

Query: 81  ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            ++ +G    +I  ++          +  +   +   +V     G+ +       G    
Sbjct: 59  AVKAIGIADEIIVEEY----------EGQKIDDIRRYQVDIFTVGSDW------EGKFDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           L +  +      V++      +++ VSSS IR 
Sbjct: 103 LNEYCK-----VVYLP-----RTEGVSSSEIRA 125


>gi|311113803|ref|YP_003985025.1| pantetheine-phosphate adenylyltransferase [Rothia dentocariosa ATCC
           17931]
 gi|310945297|gb|ADP41591.1| pantetheine-phosphate adenylyltransferase [Rothia dentocariosa ATCC
           17931]
          Length = 169

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 33/159 (20%)

Query: 22  VAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ- 78
           +AI  G+FD IH GH  I+ +A  + ++  + V             +S    L     + 
Sbjct: 2   LAICPGSFDPIHHGHLEIIARASALFDDVIVGV-----------AHNSSKKYLFSLQERV 50

Query: 79  ---EKILEKMGFSA--LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              E+ L + G +   +      +  A + A++   +VLV+ L       GT + +    
Sbjct: 51  NLVERSLAERGITTVKVEVIPPGVLLAQW-AQEHGAQVLVKGLRS-----GTDYEYEAPM 104

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           A     L          TVF+     ++   VSS+ IR 
Sbjct: 105 ASMNRHLANL------ETVFLA--GEDRFGGVSSTIIRE 135


>gi|225873602|ref|YP_002755061.1| pantoate--beta-alanine ligase [Acidobacterium capsulatum ATCC
           51196]
 gi|254778207|sp|C1F8U3|PANC_ACIC5 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|225793429|gb|ACO33519.1| pantoate--beta-alanine ligase [Acidobacterium capsulatum ATCC
           51196]
          Length = 299

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 46/161 (28%), Gaps = 30/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A    +     V S   +P     +               +LE+ G  A
Sbjct: 44  LHEGHLSLVRAAKAECD---AVVASIFVNPTQFGPNEDFGKYPRTVEADCALLEREGVDA 100

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVI------TG-TKFR 128
           +    F  +            V VE L               V TV+       G  +  
Sbjct: 101 V----FLPQVEEMYPAGATTWVEVEELSGRLDGASRPGHFRGVATVVAKLFHIVGPDRAY 156

Query: 129 FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSS 167
           FG+  A     L++      F    V    +R      +SS
Sbjct: 157 FGQKDAAQVANLRRMVRDLDFDLEVVVCPIVREADGLAMSS 197


>gi|306813315|ref|ZP_07447508.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli NC101]
 gi|305854078|gb|EFM54517.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli NC101]
          Length = 131

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE               ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLAQKAEYLW------GYSADILVMGDDW 96


>gi|16080627|ref|NP_391455.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311528|ref|ZP_03593375.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315855|ref|ZP_03597660.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320768|ref|ZP_03602062.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325054|ref|ZP_03606348.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313119|ref|YP_004205406.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis BSn5]
 gi|135274|sp|P27623|TAGD_BACSU RecName: Full=Glycerol-3-phosphate cytidylyltransferase; Short=GCT;
           Short=Gro-PCT; AltName: Full=CDP-glycerol
           pyrophosphorylase; AltName: Full=Teichoic acid
           biosynthesis protein D
 gi|6137341|pdb|1COZ|A Chain A, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
           Bacillus Subtilis
 gi|6137342|pdb|1COZ|B Chain B, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
           Bacillus Subtilis
 gi|39654162|pdb|1N1D|A Chain A, Glycerol-3-Phosphate Cytidylyltransferase Complexed With
           Cdp-Glycerol
 gi|39654163|pdb|1N1D|B Chain B, Glycerol-3-Phosphate Cytidylyltransferase Complexed With
           Cdp-Glycerol
 gi|39654164|pdb|1N1D|C Chain C, Glycerol-3-Phosphate Cytidylyltransferase Complexed With
           Cdp-Glycerol
 gi|39654165|pdb|1N1D|D Chain D, Glycerol-3-Phosphate Cytidylyltransferase Complexed With
           Cdp-Glycerol
 gi|143723|gb|AAA22843.1| putative [Bacillus subtilis]
 gi|402852|gb|AAB27724.1| CTP:glycerol-3-phosphate cytidylyltransferase, GCTase [Bacillus
           subtilis, BR151, Peptide, 129 aa]
 gi|2636100|emb|CAB15591.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320019393|gb|ADV94379.1| glycerol-3-phosphate cytidylyltransferase [Bacillus subtilis BSn5]
          Length = 129

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 4   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I      +      +  I         +   + G  +       G    
Sbjct: 58  ILETIRYVDEVI----PEKNWEQKKQDIIDH------NIDVFVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+ +        V++      +++ +S++ I+  + 
Sbjct: 102 LKDQC-----EVVYLP-----RTEGISTTKIKEEIA 127


>gi|325674173|ref|ZP_08153862.1| ADP-heptose synthase [Rhodococcus equi ATCC 33707]
 gi|325554853|gb|EGD24526.1| ADP-heptose synthase [Rhodococcus equi ATCC 33707]
          Length = 482

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 45/168 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V   G FD +H GH  +L +A  +     + V          + S S +  L        
Sbjct: 334 VATGGCFDLVHPGHLRLLREAAAL--GDALVVC---------LNSDSSVRRLKGAGRPVL 382

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
               +  +L ++    A+    F  +             L+E L     + G  +R    
Sbjct: 383 GQDARAAMLRELDTVDAVAV--FDDD---------TPTRLLERLRPDVWVKGGDYR---- 427

Query: 133 RAGDRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                  L +     + G     +  L +      S++ +  A+   H
Sbjct: 428 ----PADLPEAETVRRNGGEVRTVPPLGD-----YSTTKVVAAIESHH 466


>gi|28566182|gb|AAO43227.1| phosphoethanolamine cytidylyltransferase [Hordeum vulgare subsp.
           vulgare]
          Length = 421

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 13/134 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     I  +  P    +P   + K++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDELVVGVVSDD----EITANKGPPV--TPLHERMKMVRA 115

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +  N    ++    ++   +   +  GT       +AG     
Sbjct: 116 VKWVDDVIPDAPYAITEDFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAKKAG---RY 172

Query: 141 QKRGEKYGFHTVFI 154
           ++     G  T  I
Sbjct: 173 KQIKRTEGVSTTDI 186


>gi|56797556|emb|CAI38900.1| putative Glycerol-3-phosphate cytidylyltransferase [Campylobacter
           jejuni]
 gi|284926651|gb|ADC29003.1| putative glycerol-3-phosphate cytidylyltransferase [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|326486409|gb|ADZ76239.1| putative glycerol-3-phosphate [Campylobacter jejuni subsp. jejuni]
          Length = 129

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 38/158 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H GH  ILE+A  + +   + V    L+F         +    + +    
Sbjct: 4   VITFGTFDLFHYGHLRILERAASLGDKLIVGVSSDSLNF---------AKKHRYPIYSEQ 54

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            +  I+  +   + +  +  LE        ++        +   ++ G  ++        
Sbjct: 55  ERLNIISSLKCVSCVFLEEALELK----RDYLL-----KYQANILVMGDDWK-------- 97

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                    K+       D +   ++  +S++ I   +
Sbjct: 98  --------GKFDCFNDICDVIYFERTPSISTTEIIERI 127


>gi|311070079|ref|YP_003975002.1| hypothetical protein BATR1942_15760 [Bacillus atrophaeus 1942]
 gi|310870596|gb|ADP34071.1| hypothetical protein BATR1942_15760 [Bacillus atrophaeus 1942]
          Length = 129

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 56/156 (35%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKSYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           S +Q ++   V    +   + G  +       G    
Sbjct: 58  ILETIRYVDEVIPEN--------SWDQKVRD--VADHNIDVFVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+ +        +++      +++ +S++ I+  L 
Sbjct: 102 LKDQC-----EVIYLP-----RTEGISTTQIKKELA 127


>gi|229010949|ref|ZP_04168145.1| Pantothenate synthetase [Bacillus mycoides DSM 2048]
 gi|83316481|gb|ABC02415.1| PanC [Bacillus weihenstephanensis]
 gi|228750349|gb|EEM00179.1| Pantothenate synthetase [Bacillus mycoides DSM 2048]
          Length = 282

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 76/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+      G V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELRTSGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVTDFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+  +L +     A HL G     +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNVYLSLEER--EEAPHLYGSLCIAKERIEAGERNPEII 223


>gi|320163856|gb|EFW40755.1| hypothetical protein CAOG_05887 [Capsaspora owczarzaki ATCC 30864]
          Length = 379

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 31/180 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH ++L  A+ +A    +  ++      +++ +      + P   +   +  
Sbjct: 166 GTFDHMHNGHRILLTVAVLLARRRLVCGVTD----GSLLANKKRKELVEPLQQRINAVRD 221

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-----GKDRAGDRGI 139
             F  +IR    +E              V+         GT          ++  G   +
Sbjct: 222 --FCHVIRPDLAIEFHAI----------VDMYGPA----GTDADLDLLVVSEETKGATPL 265

Query: 140 LQKRGEKYGF------HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           + ++    G         V + +   + ++ +SS+ IR  +       A    G   T++
Sbjct: 266 INEKRSANGIPKMLKPELVELVQSDLHSAEKLSSTQIREWIAHTSTEGAKPPTGQAITVQ 325


>gi|307595609|ref|YP_003901926.1| cytidyltransferase-related domain-containing protein [Vulcanisaeta
           distributa DSM 14429]
 gi|307550810|gb|ADN50875.1| cytidyltransferase-related domain protein [Vulcanisaeta distributa
           DSM 14429]
          Length = 157

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 13/148 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L  A+       + V + +   +           +   +++  I E 
Sbjct: 14  GTFDTLHTGHTALLFTALNYGRKVLVGV-TSDEFAQAYKAYKVKPLKIRLLNLRSLIKEL 72

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G    +      +    +        +V  LE               RA +   L++  
Sbjct: 73  GGNDRDVIIDVINDPYGPTIVDPTIDAIVVSLETL------------PRAIEINNLRRER 120

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                + + +  +++     +SS+ IR 
Sbjct: 121 GLRPLYIIAVPIIKDGFGNKISSTLIRD 148


>gi|160936490|ref|ZP_02083858.1| hypothetical protein CLOBOL_01381 [Clostridium bolteae ATCC
          BAA-613]
 gi|158440575|gb|EDP18313.1| hypothetical protein CLOBOL_01381 [Clostridium bolteae ATCC
          BAA-613]
          Length = 146

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 25 GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
          G FD  H+GH  ++ +A + +    + VLS       +   +   +   P   + +I++ 
Sbjct: 16 GVFDLFHIGHLNLIRKAKERSEYLIVGVLSDE---LVLHFKNKAPYI--PFQERLEIVKA 70

Query: 85 MG-FSALIRYKFT 96
          +      +   F 
Sbjct: 71 IKYVDKAVPVTFD 83


>gi|313112773|ref|ZP_07798420.1| putative glycerol-3-phosphate cytidylyltransferase
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624843|gb|EFQ08151.1| putative glycerol-3-phosphate cytidylyltransferase
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 169

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 53/160 (33%), Gaps = 30/160 (18%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G +D  H+GH  ++ +A +  +   + V +       ++Q       + P   +  I+
Sbjct: 8   TTGVYDMFHIGHLNVIRRAKEQCDYLIVGVST-----DELVQKEKNKTPVIPYEERAAIV 62

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
             +     ++  +   +   +           E      +  G+ ++            +
Sbjct: 63  AALRYVDEVVPQEDKNKLGAW-----------EKYHFDKMFVGSDWK-------GTPQWE 104

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSN----IRTALTKG 177
           K   +   H V I  +  + +  +SS+     I+  L + 
Sbjct: 105 KYERQLRPHGVEI--VYLSHTDGISSTKLTGVIKGILDEH 142


>gi|307243386|ref|ZP_07525543.1| pantoate--beta-alanine ligase [Peptostreptococcus stomatis DSM
          17678]
 gi|306493196|gb|EFM65192.1| pantoate--beta-alanine ligase [Peptostreptococcus stomatis DSM
          17678]
          Length = 282

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 12/97 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M V  NI+    +   +K      G V  +G    +H GH  ++++A++  +   ++V  
Sbjct: 1  MKVIRNIDEIVKITRKIKEDGYSLGMVPTMGC---LHEGHKSLIKKAVENNDRVVVSVFV 57

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
             +P                    K+ E++G   + 
Sbjct: 58 ---NPTQFGPDEDYESYPRTLEADAKLCEEIGADYIF 91


>gi|298369023|ref|ZP_06980341.1| pantoate--beta-alanine ligase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283026|gb|EFI24513.1| pantoate--beta-alanine ligase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 278

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H ++  +              +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTVKELREWRKTAGRVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 LE  G + +           +  ++ +E  N   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLGQDAAKLEGEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELR 158
            +     +  V TV+             FGK       I++   E   F+     +D  R
Sbjct: 115 GRFRPGHFRGVATVVTKLFNIVLPDAACFGKKDYQQLAIIKGFAEDLNFNVEIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +    +SS N    L +     A  L 
Sbjct: 175 ASDGLALSSRN--QYLNENERAEAPRLF 200


>gi|154507742|ref|ZP_02043384.1| hypothetical protein ACTODO_00224 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797376|gb|EDN79796.1| hypothetical protein ACTODO_00224 [Actinomyces odontolyticus ATCC
           17982]
          Length = 165

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 24/157 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH  IL  A +  +   + V + +      +        + P   +  ++  
Sbjct: 17  GGFDMFHQGHLNILRAARERCDRLVVGV-TSD----EALIRMKGRAPVIPLKERCDLVSS 71

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
           + F   +      +          +++         +  G  ++     A     L+   
Sbjct: 72  LRFVDAVVVDLDQD----------KRLAWRLQPFDVLFKGDDWKDTPKGAA----LEAEM 117

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            + G   V++       +   SS+ +R  +      +
Sbjct: 118 AEVGARVVYLP-----YTPSTSSTKLRRFIAPEDFSD 149


>gi|94263215|ref|ZP_01287032.1| Cytidyltransferase-related [delta proteobacterium MLMS-1]
 gi|93456433|gb|EAT06553.1| Cytidyltransferase-related [delta proteobacterium MLMS-1]
          Length = 284

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 69/217 (31%), Gaps = 43/217 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E+A ++A      V+S   +P    +++        P    + L
Sbjct: 29  TMGN---LHAGHLALVERAGQLARR---VVVSIFVNPAQFERAADLAAYPRTPEEDRQKL 82

Query: 83  EKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWL--------------EVKTVITG--- 124
              G   L    F  E A    A +   +V V  L               V T++     
Sbjct: 83  TTAGVDCL----FAPEAAAIYPAGKLATRVEVPELSEILEGASRPGHFTGVATIVCKLFN 138

Query: 125 ----TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNI------RT 172
                   FG+       +L++           V +  +R +    +SS N       R 
Sbjct: 139 LVEPEIALFGEKDFQQLALLRRMAADLNMAVELVSLPTVRESDGLAMSSRNRLLNAEQRR 198

Query: 173 ---ALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
               L +     AA L      +     HG++    L
Sbjct: 199 LAPLLHQTLRETAAQLTVTDHGVHGVGDHGQQAMAKL 235


>gi|15644640|ref|NP_206808.1| pantoate--beta-alanine ligase [Helicobacter pylori 26695]
 gi|2498743|sp|P56061|PANC_HELPY RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|2313083|gb|AAD07079.1| pantoate-beta-alanine ligase (panC) [Helicobacter pylori 26695]
          Length = 276

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 33/196 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     L+  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIVALREYRKSLEESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-- 115
           +P     +        P      + EK+G +A+       E   Y AEQ ++    ++  
Sbjct: 55  NPTQFGANEDFNAYPRPLEKDLALCEKLGVNAVFV-PKIGEMYPYEAEQRLKLYAPKFLS 113

Query: 116 -------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE 156
                              L++  ++  T+  FGK  A    I++   +           
Sbjct: 114 SSLEGAMRKGHFDGVVQIVLKMFHLVNPTRAYFGKKDAQQLLIIEHLVKDLLLDIEIAPC 173

Query: 157 --LRNNKSQIVSSSNI 170
             +R++ +  +SS N+
Sbjct: 174 EIVRDDDNLALSSRNV 189


>gi|257422114|ref|ZP_05599104.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|257163938|gb|EEU93898.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|315157148|gb|EFU01165.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0043]
          Length = 132

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 34/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD  H GH  +L++A +  +   + + +  FN        S +     S    +
Sbjct: 4   VITYGTFDLFHYGHINLLKRAKEQGDYLIVGLSTDEFN------WNSKNKKCYFSYEERK 57

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDR 137
             +        +I             E + QKV  +E   V T + G  +       G+ 
Sbjct: 58  SILESVRYVDLVI-----------PEENWEQKVKDIELYHVDTFVMGNDW------EGEF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             ++             D +   ++  +S++ I+  L   
Sbjct: 101 DFIR--------EVTNADVMYLERTPEISTTQIKKELKNR 132


>gi|239944987|ref|ZP_04696924.1| putative glycerol-3-phosphate cytidyltransferase [Streptomyces
           roseosporus NRRL 15998]
 gi|239991451|ref|ZP_04712115.1| putative glycerol-3-phosphate cytidyltransferase [Streptomyces
           roseosporus NRRL 11379]
 gi|291448447|ref|ZP_06587837.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces roseosporus
           NRRL 15998]
 gi|291351394|gb|EFE78298.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces roseosporus
           NRRL 15998]
          Length = 149

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 26/152 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S        +          P   + +I+  
Sbjct: 11  GVYDLFHVGHLNILRHARSQCDYLVAGVVSDE---MAALAKGHTPMI--PLRERLEIVRS 65

Query: 85  MGFSALIRYKF-TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                    +F          ++      V +     +  G  +R         G  +  
Sbjct: 66  --------VRFVDAAFVETVPDKVETWQQVRF---DVIFKGDDWR---------GTEKGL 105

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             +  F  V ++ +    +   SS+ +R AL 
Sbjct: 106 KLERDFAEVGVEVVYFPYTVHTSSTQLRRALD 137


>gi|163119673|ref|YP_080899.2| glycerol-3-phosphate cytidylyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|145903183|gb|AAU25261.2| glycerol-3-phosphate cytidylyltransferase [Bacillus licheniformis
           ATCC 14580]
          Length = 129

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 33/157 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 4   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + +Q +Q V+   ++V   + G  +       G    
Sbjct: 58  ILETIRYVDEVIP--------EKNWDQKVQDVIDHDIDV--FVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L+          V++      +++ +S++ I+  +  
Sbjct: 102 LKDYC-----EVVYLP-----RTEGISTTKIKEEIAN 128


>gi|298506196|gb|ADI84919.1| D-glycero-D-mannoheptose-7-phosphate kinase and
           D-glycero-D-mannoheptose-1-phosphate adenylyltransferase
           [Geobacter sulfurreducens KN400]
          Length = 490

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 41/172 (23%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS- 76
           K  V   G FD +H+GH   L++A    +   +            + S + I  L     
Sbjct: 352 KRVVFTNGCFDLLHVGHVKYLQKARSFGDLLILG-----------LNSDASIRRLKGERR 400

Query: 77  ------IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
                  +  IL  +     ++   F  +             L+E L    ++ G  +  
Sbjct: 401 PLIGQEERAHILAALDCVDYVVV--FDED---------TPLNLIETLRPAVLVKGGDYTL 449

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
                G  G  ++  E YG     +  +        S++NI   + K +   
Sbjct: 450 ----DGVVG--REVVESYGGRVELVAFV-----DGRSTTNIIEKILKAYGEE 490


>gi|332184466|gb|AEE26720.1| Pantoate--beta-alanine ligase [Francisella cf. novicida 3523]
          Length = 261

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 43/216 (19%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +  NIE    L          G V  +G    +H GH  ++++A    +   + ++S 
Sbjct: 1   MIIAKNIEQFNLLRESFTKEQKIGFVPTMG---ALHSGHISLIKKAKSEND---VVIVSI 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P      +      +      +ILE +    L    F     +   +  + ++  E 
Sbjct: 55  FVNPTQFNNPNDYQTYPNQLQQDMQILESLDVDIL----FNPSEKDIYPDGNLLRIQPE- 109

Query: 116 LEVKTVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGF--H 150
           LE+  ++ G                            G+       ++++  + +     
Sbjct: 110 LEIANILEGKARPGHFSGMLTVVLKLIQITKPDNLYLGEKDYQQVMLIKQLVKDFFINTK 169

Query: 151 TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +     R      +SS N    LT   +  A  + 
Sbjct: 170 VIICPTQREPTGLPLSSRN--KNLTSTDMEIANKVY 203


>gi|269926373|ref|YP_003322996.1| pantoate/beta-alanine ligase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790033|gb|ACZ42174.1| pantoate/beta-alanine ligase [Thermobaculum terrenum ATCC BAA-798]
          Length = 289

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 40/198 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M VF  ++  +S    L G V     +G    +H GH  ++ ++ ++ ++   T++S   
Sbjct: 1   MRVFETVDDIRSFRRRLTGTVGFVPTMGY---LHQGHVSLIRKSKQLCDH---TIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE--- 114
           +P     S              +IL   G  A+    F+              V+V+   
Sbjct: 55  NPTQFGPSEDYDSYPRDIERDIRILSSEGVDAV----FSPSVQEMYPLGM--DVIVDPGP 108

Query: 115 -------------WLEVKTVI------TGTKFR-FGKDRAGDRGILQKRGEKYGFHT--V 152
                        +  V T++       G     FG+  A    +L +   +       V
Sbjct: 109 IANKLEGAKRPGHFKGVATIVCKLFNIIGPDMAFFGQKDAQQIVVLHRVVTELHIPVKLV 168

Query: 153 FIDELRNNKSQIVSSSNI 170
               +R +    +SS N+
Sbjct: 169 PCPTVREDDGLAMSSRNV 186


>gi|154151377|ref|YP_001404995.1| phosphopantetheine adenylyltransferase [Candidatus Methanoregula
           boonei 6A8]
 gi|153999929|gb|ABS56352.1| cytidyltransferase-related domain [Methanoregula boonei 6A8]
          Length = 165

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 47/162 (29%), Gaps = 37/162 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L ++ ++A      V+     P     S      + P + +   LEK
Sbjct: 7   GTFDPLHDGHKRLLTRSFELAGPGGKVVIGLTTDP---FASRKTHP-IHPFAERRADLEK 62

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +I        A     ++     +E L           RFG     D   +    
Sbjct: 63  FITGHII--------AQIPERKYATLWEIEPLS---------DRFGSALDADFDAIVVSE 105

Query: 145 EKYGFHTVF----------------IDELRNNKSQIVSSSNI 170
           E                        I  +     + +SS+ I
Sbjct: 106 ETLPVAVEINKMRREKNLRKVDIHQITCVLAEDGRWISSTRI 147


>gi|300936115|ref|ZP_07151055.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli MS 21-1]
 gi|300458735|gb|EFK22228.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli MS 21-1]
          Length = 134

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MSIIAGLACVDGV----FLEESLEQKAE------YLRGYRADILVMGDDW 96


>gi|123968974|ref|YP_001009832.1| putative ADP-heptose synthase [Prochlorococcus marinus str. AS9601]
 gi|123199084|gb|ABM70725.1| putative ADP-heptose synthase [Prochlorococcus marinus str. AS9601]
          Length = 501

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 22/114 (19%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           N     ++  G+F+ IH GH   L+ A +I     + V+        I++  S    +  
Sbjct: 15  NFYSNCILGYGHFNSIHPGHIRYLKHAREINK---LFVV-------AILKDLSCEGLIFN 64

Query: 75  PSIQEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            + +   L ++G   A+I                     V+ +  K VI G ++
Sbjct: 65  QTERANSLAQLGIADAIILLPDNSLNKA-----------VKKINPKEVILGKEY 107


>gi|172056631|ref|YP_001813091.1| glycerol-3-phosphate cytidylyltransferase [Exiguobacterium
           sibiricum 255-15]
 gi|171989152|gb|ACB60074.1| glycerol-3-phosphate cytidylyltransferase [Exiguobacterium
           sibiricum 255-15]
          Length = 129

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 31/154 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  IL++A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINILKRAKEMGDYLVVAISTDE------FNRLKHKESYHSFENRKL 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ILE      +         A  + +Q I    V+  ++ T + G  +      AG+   L
Sbjct: 58  ILES--IRYV-----DEVIAENNWDQKITD--VQEHQIDTFVMGDDW------AGEFDFL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           ++  E           +  ++++ +S+S I+T L
Sbjct: 103 KEYCEV----------VYLSRTEGISTSQIKTEL 126


>gi|332716283|ref|YP_004443749.1| pantoate-beta-alanine ligase [Agrobacterium sp. H13-3]
 gi|325062968|gb|ADY66658.1| pantoate-beta-alanine ligase [Agrobacterium sp. H13-3]
          Length = 292

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 37/198 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +   +   + L    +     +G      F  +H+GH  ++ +A    +   +TV+S 
Sbjct: 1   MRLVKTVAELRGLTATFRRDGKTVGFVPTMGF--LHIGHLTLVARAKAEND---VTVVSI 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +          +    +LE+ G   L    F  E            V V  
Sbjct: 56  FVNPLQFGANEDLARYPRDLARDSALLEEAGVDIL----FAPEVTEMYPRPMQTVVDVPE 111

Query: 116 L--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGE--KYGFHTV 152
           L               V TV+             FG+       ++++  +        V
Sbjct: 112 LGSQLEGAVRPGHFAGVTTVVTKLFNLVQPDAAYFGEKDYQQVTLIRRMVDDLAQPVRVV 171

Query: 153 FIDELRNNKSQIVSSSNI 170
            +  +R       SS N+
Sbjct: 172 PVATVREADGLACSSRNV 189


>gi|119468900|ref|ZP_01611925.1| pantothenate synthetase [Alteromonadales bacterium TW-7]
 gi|119447552|gb|EAW28819.1| pantothenate synthetase [Alteromonadales bacterium TW-7]
          Length = 282

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 16/130 (12%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M     I+  +S     +        V  +GN   +H GH  ++E+A  +A+     V+S
Sbjct: 1   MQSITEIKSLRSQIKAWRQAGLSVAFVPTMGN---LHRGHFSLVEKAKTLADK---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +          S  ++ L ++G   +    FT   +        ++  V+
Sbjct: 55  IFVNPMQFGANEDLDNYPRTLSEDKQGLAELGTDIV----FTPSVSTIYPNGLGEQSFVD 110

Query: 115 WLEVKTVITG 124
              V     G
Sbjct: 111 VPGVSLGYCG 120


>gi|212640393|ref|YP_002316913.1| glycerol-3-phosphate cytidylyltransferase [Anoxybacillus
           flavithermus WK1]
 gi|212561873|gb|ACJ34928.1| Glycerol-3-phosphate cytidylyltransferase [Anoxybacillus
           flavithermus WK1]
          Length = 146

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 53/158 (33%), Gaps = 33/158 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++ +   + + +                       ++ 
Sbjct: 18  VITYGTFDLLHYGHIHLLRRAKQLGDYLIVGLSTDE------FNEIKGKKAYFSYEQRKL 71

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I  +        S EQ ++ +L     V   + G  ++           
Sbjct: 72  LLESIKYVDQVIPEE--------SWEQKVRDILS--YNVDIFVMGDDWKD------KFDF 115

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           L    E           +   ++  +S++ I+  + + 
Sbjct: 116 LNNYCEV----------VYLQRTLEISTTKIKMDIKEY 143


>gi|195999294|ref|XP_002109515.1| hypothetical protein TRIADDRAFT_53627 [Trichoplax adhaerens]
 gi|190587639|gb|EDV27681.1| hypothetical protein TRIADDRAFT_53627 [Trichoplax adhaerens]
          Length = 369

 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 7  IEINQSLPNHLKGGVVAI---GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
          I+ N       +G  V I   G FD +H GH  +L QA    +     V     H    I
Sbjct: 5  IDYNDISTIQTEGEAVRIWCDGCFDMMHYGHANVLRQAKSFGSFLIAGV-----HSSEEI 59

Query: 64 QSSSPIFTLSPPSIQEKILEKMG-FSALIR 92
            +     L+    + K+L  +     ++ 
Sbjct: 60 AKNKGPPVLT-LDERAKLLGSVRWVDQVVI 88


>gi|254993233|ref|ZP_05275423.1| hypothetical protein LmonocytoFSL_09527 [Listeria monocytogenes FSL
           J2-064]
          Length = 390

 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   +     + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IISKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + V T+  G        F F   +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTFAAKK 116


>gi|281181124|dbj|BAI57454.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 342

 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 53/185 (28%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE-- 79
           + +G F  +H GH  ++  A+       I   S    P        P   L+   ++   
Sbjct: 16  LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDC-----EPEKRLTWLQVRFPQ 70

Query: 80  --------KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
                   +++ +     L         A+     ++  + ++ L  +   V T   +  
Sbjct: 71  ATFLVLTPELVARY---NLPAIPHNNADADI-HRHYVATLCLQILRCRPHAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G               ++      +   R    +  S + IR+ + +   + A  +    
Sbjct: 127 GFANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSF 178

Query: 190 FTIES 194
                
Sbjct: 179 VRRIC 183


>gi|309379430|emb|CBX21997.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 278

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H ++  ++   +  G V     +GN   +H GH  ++ +A K A+N    V+S   
Sbjct: 1   MQIIHTVQELRAWRKNA-GTVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFI 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 L   G + +           +  ++ +E  +   E 
Sbjct: 54  NRLQFGQGEDFDKYPRTLQQDADKLAAEGIAVVFAPDEKELYPNVEQRYNVEPPHLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF--IDEL 157
             +     +  V TV+             FGK       +++   E   F      +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L+      A  L 
Sbjct: 174 RAEDGLALSSRN--QYLSAAERAEAPRLY 200


>gi|253583490|ref|ZP_04860688.1| citrate lyase synthetase [Fusobacterium varium ATCC 27725]
 gi|251834062|gb|EES62625.1| citrate lyase synthetase [Fusobacterium varium ATCC 27725]
          Length = 344

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 37/171 (21%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSAL 90
           GH  ++E+A          VL F      ++Q    IF   P  I+  +++K       +
Sbjct: 157 GHQFLIEKAAAENEE----VLIF------VVQEDKSIF---PFKIRYDLVKKGTAHLPNV 203

Query: 91  IRYK----------FTLETANYSAEQFIQKVLV----------EWLEVKTVITGTKFRFG 130
                         F         +  ++   +          E L +     G +    
Sbjct: 204 KVIPGTEYIISSATFPNYFLRKEDDSLMEYTKLDATIAGKQFGEKLGINKRYIGEEPYCP 263

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             +  +   L +   +YG   + +   +      +S+S +R  L +G +  
Sbjct: 264 VTKKYN-DALMEILPEYGMEVILVPR-KELHHTAISASIVREKLKEGKIEE 312


>gi|157693981|ref|YP_001488443.1| glycerol-3-phosphate cytidylyltransferase [Bacillus pumilus
           SAFR-032]
 gi|194015485|ref|ZP_03054101.1| glycerol-3-phosphate cytidylyltransferase [Bacillus pumilus ATCC
           7061]
 gi|157682739|gb|ABV63883.1| glycerol-3-phosphate cytidylyltransferase [Bacillus pumilus
           SAFR-032]
 gi|194012889|gb|EDW22455.1| glycerol-3-phosphate cytidylyltransferase [Bacillus pumilus ATCC
           7061]
          Length = 132

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 56/156 (35%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 7   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKSKKAYHSYEHRKL 60

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           S +Q ++   V+  ++   + G  +       G    
Sbjct: 61  ILETIRYVDEVIPEN--------SWDQKVRD--VQEHDIDVFVMGDDW------EGKFDF 104

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L++  E           +   +++ +S++ I+  + 
Sbjct: 105 LKEHCEV----------VYLKRTEGISTTQIKEEIA 130


>gi|257082135|ref|ZP_05576496.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256990165|gb|EEU77467.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
          Length = 132

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 34/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD  H GH  +L++A +  +   + + +  FN        S +     S    +
Sbjct: 4   VITYGTFDLFHYGHINLLKRAKEQGDYLIVGLSTDEFN------WNSKNKKCYFSYEERK 57

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDR 137
             +        +I             E + QKV  +E   V T + G  +       G+ 
Sbjct: 58  SILESVRYVDLVI-----------PEENWEQKVKDIELYHVDTFVMGNDW------EGEF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             ++             D +   ++  +S++ I+  L   
Sbjct: 101 DFIR--------EVTNADVMYLERTPEISTTQIKKELKNR 132


>gi|218780665|ref|YP_002431983.1| rfaE bifunctional protein [Desulfatibacillum alkenivorans AK-01]
 gi|226702242|sp|B8FB71|HLDE_DESAA RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|218762049|gb|ACL04515.1| rfaE bifunctional protein [Desulfatibacillum alkenivorans AK-01]
          Length = 489

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 39/175 (22%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI------TVLSFNPHPRTIIQ 64
           ++L    K  ++  G FD +H GH  +LEQ+ K+ +   +      +V       R +  
Sbjct: 346 ENLRRQGKKIILTNGCFDLLHEGHINLLEQSRKLGDVLVVAVDDDESV-------RMVKG 398

Query: 65  SSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
              PI        + KI+  M G   +  +                  L+  ++   +  
Sbjct: 399 QGRPIIR---ERERVKIISAMTGVDFVTVFSTNQ-----------LDELIRAVKPDILTK 444

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           G  ++       D+ +  +  E+ G   V I +  +     VSS+ I   +  G 
Sbjct: 445 GGNYKP------DQVLGHEIVEELGGRIVLIPDASD-----VSSTRIIQDIRNGR 488


>gi|291461143|ref|ZP_06600281.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium periodonticum ATCC
           33693]
 gi|291378678|gb|EFE86196.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium periodonticum ATCC
           33693]
          Length = 376

 Score = 40.1 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 63/167 (37%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +++ +  +  +      + I+  
Sbjct: 187 LGHQYLVEKAASENDILHLFIVSDDSSLVPFEVRKKLVMEGTRHLKNICYHETGDYIISS 246

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +  + + L +     G +         ++ 
Sbjct: 247 ATFPSYFQKDEVAVI---ESQANLDIEIFTR--IAKALNINKRYVGEEPNSLVTNIYNQT 301

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      + +   + + +  +S+S +R  + +G++ +  +L
Sbjct: 302 MLKKLPE-NNIECIVVPRKKYSDNV-ISASTVRQIIKEGNLEDLKNL 346


>gi|320106618|ref|YP_004182208.1| rfaE bifunctional protein [Terriglobus saanensis SP1PR4]
 gi|319925139|gb|ADV82214.1| rfaE bifunctional protein [Terriglobus saanensis SP1PR4]
          Length = 498

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V   G FD +H+GH  +LE        S + V ++ +   + +   + P+        + 
Sbjct: 362 VFTNGCFDLLHVGHVTLLEDCRAF--GSKLVVGMNTDASVQRLKGPNRPVV---GERERA 416

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           K++  MG   ++   F  +    +    I+      L    ++ G  + 
Sbjct: 417 KVMAAMGAVDVVVL-FDED----TPLDLIR-----ALRPDVLVKGGDYS 455


>gi|300857197|ref|YP_003782181.1| citrate (pro-3S)-lyase ligase [Clostridium ljungdahlii DSM 13528]
 gi|300437312|gb|ADK17079.1| citrate (pro-3S)-lyase ligase [Clostridium ljungdahlii DSM 13528]
          Length = 346

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 11/163 (6%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
            GH  ++E+A K  N   + ++        F+     +   +  +  +      E I+ +
Sbjct: 160 KGHRYLVEEAAKNCNQVLLFLVEEDRSDFPFSDRYTMVKTGTQDLKNVKVIPAGEYIISQ 219

Query: 85  MGFSALIRYKFTLETANYSAEQ--FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             F      K       Y         K + +   +K    G +         +   L+K
Sbjct: 220 ATFPNYFIKKTDERLQAYEEIDSGIFGKYICKRFNIKKRFVGKEPYCDVTSTYN-ETLKK 278

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
               Y    V I+  + N+ + +S+S +R  L  G +     +
Sbjct: 279 IMPIYNVEVVEIEREKYNE-EYISASKVRKLLCAGRMDVIEKI 320


>gi|154491023|ref|ZP_02030964.1| hypothetical protein PARMER_00940 [Parabacteroides merdae ATCC
           43184]
 gi|218261342|ref|ZP_03476204.1| hypothetical protein PRABACTJOHN_01870 [Parabacteroides johnsonii
           DSM 18315]
 gi|154088771|gb|EDN87815.1| hypothetical protein PARMER_00940 [Parabacteroides merdae ATCC
           43184]
 gi|218224089|gb|EEC96739.1| hypothetical protein PRABACTJOHN_01870 [Parabacteroides johnsonii
           DSM 18315]
          Length = 156

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 33/163 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD  H  H  ++  A  +A+   + V +        + SS     + P + + +
Sbjct: 8   VYTSGTFDMFHYNHLRMINYARSLADILIVGVSTDE------LVSSYKAKPIIPFTERLQ 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I+E +    ++  + TL+ +            V+ L +   + G  +       G    L
Sbjct: 62  IIEALKTPDIVIPQHTLDHSEI----------VKKLNIDAFVVGDDWY------GKYDYL 105

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           +  G         +          VSSSN++  +       A 
Sbjct: 106 KDLG---------VQVFYFPYGTGVSSSNLKKTI--HDSYEAN 137


>gi|152964544|ref|YP_001360328.1| pantoate--beta-alanine ligase [Kineococcus radiotolerans
          SRS30216]
 gi|151359061|gb|ABS02064.1| pantoate--beta-alanine ligase [Kineococcus radiotolerans
          SRS30216]
          Length = 288

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
          V+ +G    +H GH  ++E+A      +P  +++   +P                    +
Sbjct: 30 VMTMG---ALHAGHARLIEEAR---RRAPSVLVTIFLNPLQFGAGEDLARYPRTLDDDLR 83

Query: 81 ILEKMGFSALI 91
          +    G   + 
Sbjct: 84 LAAAAGADVVF 94


>gi|90580754|ref|ZP_01236557.1| putative ADP-heptose synthase [Vibrio angustum S14]
 gi|90438022|gb|EAS63210.1| putative ADP-heptose synthase [Vibrio angustum S14]
          Length = 476

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V        ++     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLTEAAKLGDRLIVAV----NSDSSVKGLKGPGRPVNPEERRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   FT E    + ++ I +VL        ++ G  ++
Sbjct: 399 VLAGLGAVDWVV--PFTEE----TPQRLISEVL-----PSLLVKGGDYK 436


>gi|71664619|ref|XP_819288.1| ethanolamine-phosphate cytidylyltransferase [Trypanosoma cruzi
           strain CL Brener]
 gi|70884583|gb|EAN97437.1| ethanolamine-phosphate cytidylyltransferase, putative [Trypanosoma
           cruzi]
          Length = 382

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 5   HNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP-RT 61
           + +     +P    G V     G FD +H GH   L QA  + +   +       H    
Sbjct: 17  YPLYATTPVPPKKPGTVRIWVDGCFDMLHFGHANALRQAAALGDELFVGC-----HSDAE 71

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIR-YKFTLETANYSAEQFIQKVLVEWLEVK 119
           I+Q   P   +     + + L        ++  Y +    A+            + LEV 
Sbjct: 72  IMQYKGPP--IMHEEERYEALRACKWVDFVVEGYPYVTRLADM-----------DRLEVD 118

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKG 177
            V+ G       +        Q+  +   F  +        +++ +S++++  R  L   
Sbjct: 119 YVVHGDDISVDLNGHNS---YQEIIDAGRFKVI-------KRTESISTTDLVGRMLLCNH 168


>gi|95928767|ref|ZP_01311513.1| Glycerol-3-phosphate cytidylyltransferase [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135112|gb|EAT16765.1| Glycerol-3-phosphate cytidylyltransferase [Desulfuromonas
           acetoxidans DSM 684]
          Length = 133

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 27/128 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH  +L++A  + +   + + +          +     +  P   +++
Sbjct: 9   VITYGTFDLLHVGHVRLLKRAKSLGDVLIVGLSTDE------FNAVKHKSSFLPYEQRKE 62

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKFRFGKDRAGDR 137
           ILE +     +I             E    +    V   +V     G  +       G+ 
Sbjct: 63  ILESIRYVDKVI------------PENNWDQKRSDVRKYKVDIFTIGDDW------LGEF 104

Query: 138 GILQKRGE 145
             L++  E
Sbjct: 105 DFLKEYCE 112


>gi|225439045|ref|XP_002265213.1| PREDICTED: similar to Os11g0123400 isoform 2 [Vitis vinifera]
          Length = 412

 Score = 40.1 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 25/183 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P    +P + +  ++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEITANKGPPV--TPLNERMIMVS- 114

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +         A    E F++K+  +   +  +I G       D      + +K G
Sbjct: 115 -GVKWVDEVIPDAPYAIT--EDFMKKLF-DEYNIDYIIHGDDPCILPDGTDAYALAKKAG 170

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGR 204
                           +++ VSS++I              LLG+           E  G 
Sbjct: 171 RYKQIK----------RTEGVSSTDI----VGTDSALFIFLLGFLQFSHGHSQKFEDGGS 216

Query: 205 TLG 207
             G
Sbjct: 217 GSG 219


>gi|312139944|ref|YP_004007280.1| bifunctional sugar kinase/cytidynyltransferase [Rhodococcus equi
           103S]
 gi|311889283|emb|CBH48597.1| putative bifunctional sugar kinase/cytidynyltransferase
           [Rhodococcus equi 103S]
          Length = 482

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 45/168 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V   G FD +H GH  +L +A  +     + V          + S S +  L        
Sbjct: 334 VATGGCFDLVHPGHLRLLREAAAL--GDALVVC---------LNSDSSVRRLKGAGRPVL 382

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
              ++  +L ++    ++    F  +             L+E L     + G  +R    
Sbjct: 383 GQDVRAAMLRELDTVDSVAV--FDDD---------TPTRLLERLRPDVWVKGGDYR---- 427

Query: 133 RAGDRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                  L +     + G     +  L +      S++ +  A+   H
Sbjct: 428 ----PADLPEAETVRRNGGEVRTVPPLGD-----YSTTKVVAAIESHH 466


>gi|225847852|ref|YP_002728015.1| pantoate--beta-alanine ligase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643343|gb|ACN98393.1| pantoate--beta-alanine ligase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 280

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 19/137 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  N +  Q    +LK      G V  +G    +H GH  ++  A    +   I V+S
Sbjct: 1   MQIIKNPKELQDTILNLKKQGKKVGFVPTMGY---LHDGHVSLIRCAKSQND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++             + I EK G   L    F  +  +   E F  +  VE
Sbjct: 55  IFVNPLQFGKNEDLDRYPRDFERDKSICEKEGVDYL----FYPDYKDMYPEGF--QTYVE 108

Query: 115 WLEVKTVITGTKFRFGK 131
            +E+   + G  +R G 
Sbjct: 109 VVELSKGLCG-DYRPGH 124


>gi|195135431|ref|XP_002012136.1| GI16599 [Drosophila mojavensis]
 gi|193918400|gb|EDW17267.1| GI16599 [Drosophila mojavensis]
          Length = 514

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 47/182 (25%), Gaps = 31/182 (17%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGH-----HLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
            +       VV  G FD IH+GH       +L    ++        ++         +  
Sbjct: 133 DVNQKAYPTVVLGGTFDRIHVGHKIFLTQAVLRACKRLVVGVTTAAMT---------KGK 183

Query: 67  SPIFTLSPPSIQEKILEK--MGFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                + P   +   L +  +     +                +  +            +
Sbjct: 184 ILPELILPVEQRIAELREFLLDIDNTLQYDIVPIDDPFGPTQHDPDMDL----------I 233

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHV 179
           +   +   G  +  +    ++  +   F    ++    +      VSSSN R  L     
Sbjct: 234 VVSAETLRGGQKVNEIRAAKQLRQLEIFAIDIVESKVVDGIHESKVSSSNTRIDLLGTRW 293

Query: 180 LN 181
             
Sbjct: 294 RQ 295


>gi|288918275|ref|ZP_06412629.1| rfaE bifunctional protein [Frankia sp. EUN1f]
 gi|288350312|gb|EFC84535.1| rfaE bifunctional protein [Frankia sp. EUN1f]
          Length = 768

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 30/157 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH  +L  A  + +   +  L+ +   R +     P   +   + +  
Sbjct: 634 VATGGCFDLLHAGHVEVLRAARSLGD-CLVVCLNSDDSIRRLKGPDRP---IVGAADRAA 689

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +    A++   F  +    +  + +  +  +              F K        
Sbjct: 690 VLRGLDSVDAVMV--FDED----TPARLLADLRPDI-------------FAKGGDYAVTD 730

Query: 140 LQKR--GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L +      +G   V +       +   +S+ IR A+
Sbjct: 731 LPEAGIVASWGGQAVVLP----YLAGRSTSTLIREAV 763


>gi|239994855|ref|ZP_04715379.1| pantothenate synthetase [Alteromonas macleodii ATCC 27126]
          Length = 283

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 61/224 (27%), Gaps = 43/224 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V  +I   +S  N  +      G V  +GN   +H GH  ++++A    +     V+S
Sbjct: 1   MKVVDSISALRSTVNAWRRNGETVGFVPTMGN---LHDGHLKLVKKAKAHNDK---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +             +  L  +G  A+    F    A         +  VE
Sbjct: 55  IFVNPMQFGANEDLDAYPRTIEEDKAKLTSVGADAV----FLPSVAEMYPAGLDAQTFVE 110

Query: 115 WLEVKTVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGFHT 151
              +     G                           FG+       +++          
Sbjct: 111 VPGISGSHCGASRPGHFRGVATVVTKLFNMVQPDDAFFGEKDFQQLQVIRALARDLSMAV 170

Query: 152 VF--IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
               +   R      +SS N    LT      A+ +      ++
Sbjct: 171 KVHGVPTERETSGLAMSSRN--GYLTDTEKATASAIFAEMQRLK 212


>gi|257388288|ref|YP_003178061.1| cytidyltransferase-related domain protein [Halomicrobium mukohataei
           DSM 12286]
 gi|257170595|gb|ACV48354.1| cytidyltransferase-related domain protein [Halomicrobium mukohataei
           DSM 12286]
          Length = 162

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 16/159 (10%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           VA+G  FD IH GH  + E+A ++ +   +TV L+ +     +      +        + 
Sbjct: 3   VALGGTFDPIHDGHRALFERAFELGD---VTVGLTSDDLAPELRNEDRYVR---SFEERR 56

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           + L++        Y    +    +    I        +   +I   +   G  R      
Sbjct: 57  RDLDEELADFAAEYDREYDVRELTEPTGIAT----EPQFDVLIVSPETETGGKR---INE 109

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKG 177
           ++            +  +  +  +++SS+ I R  + + 
Sbjct: 110 IRSERGHDTLDIEVVPHVYADDDEVISSTRIVRGEIDQH 148


>gi|218703516|ref|YP_002411035.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli UMN026]
 gi|293403346|ref|ZP_06647437.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli FVEC1412]
 gi|298378958|ref|ZP_06988839.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli FVEC1302]
 gi|300898047|ref|ZP_07116417.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli MS 198-1]
 gi|218430613|emb|CAR11479.1| Glycerol-3-phosphate cytidylyltransferase, CDP-glycerol
           pyrophosphorylase (Teichoic acid biosynthesis protein D)
           [Escherichia coli UMN026]
 gi|291429199|gb|EFF02219.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli FVEC1412]
 gi|298280071|gb|EFI21575.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli FVEC1302]
 gi|300358245|gb|EFJ74115.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli MS 198-1]
          Length = 134

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A K+     + V   +     I +             +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARKLGERLLVGV---SSDALNIAKKGRAPVY--HQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYGADILVMGDDW 96


>gi|224133810|ref|XP_002327686.1| predicted protein [Populus trichocarpa]
 gi|222836771|gb|EEE75164.1| predicted protein [Populus trichocarpa]
          Length = 178

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P +    VV  G FD +H GH L L+ A ++A +  +  +   P     +++      + 
Sbjct: 15  PPNSYSAVVLGGTFDRLHDGHRLFLKAAAELAKDRIVIGVCDGPM----LKNKQFAELIQ 70

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSA---EQFIQKVLVEWLEVKTVITGTKFRFG 130
           P   +   +E           F  E    +    + +   ++ E L    ++   +   G
Sbjct: 71  PIEERMHNVEN------YIKSFKPELVVQTETITDPYGPSIVDENLGA--IVVSKETVAG 122

Query: 131 ----KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
                 +  DRG+      +     V +    +  +  +SS+ +R  
Sbjct: 123 GLSVNKKRADRGL-----SQLKIEVVDLVPEESGGANKLSSTTLRRL 164


>gi|217074798|gb|ACJ85759.1| unknown [Medicago truncatula]
          Length = 418

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 23/147 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + ++S       I+ +  P         +  ++  
Sbjct: 71  GCFDLMHYGHANALRQAKALGDELVVGLVSDE----EIVANKGPPVL--SMDERLALVSG 124

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     +I    T      + E F+ ++  E   +  VI G       D        +K 
Sbjct: 125 LKWVDEVI----TDAPYAIT-ETFLNRLFHE-YNIDYVIHGDDPCLLPDGTDAYAAAKKA 178

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI 170
           G                +++ VSS++I
Sbjct: 179 GRYKQIK----------RTEGVSSTDI 195


>gi|46908284|ref|YP_014673.1| hypothetical protein LMOf2365_2080 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|73921079|sp|Q71XW5|Y2080_LISMF RecName: Full=UPF0348 protein LMOf2365_2080
 gi|46881555|gb|AAT04850.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
          Length = 390

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 18/118 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--ILPKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDRAGDRG 138
            ++     F  + A   AE+ ++ +  + + V T+  G        F     +  D  
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTLAAKKVVDNE 121


>gi|15643835|ref|NP_228883.1| pantoate--beta-alanine ligase [Thermotoga maritima MSB8]
 gi|8134623|sp|Q9X0G6|PANC_THEMA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|170292164|pdb|2EJC|A Chain A, Crystal Structure Of Pantoate--Beta-Alanine Ligase (Panc)
           From Thermotoga Maritima
 gi|4981622|gb|AAD36154.1|AE001768_3 pantoate--beta-alanine ligase [Thermotoga maritima MSB8]
          Length = 280

 Score = 40.1 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MRIIETIEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARAEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LEK     +    +   +  + + Y  E  + K
Sbjct: 55  IFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYPPDFSTYVEETKLSK 114

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 115 HLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 174

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 175 IVREPDGLAMSSRNV 189


>gi|307543607|ref|YP_003896086.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Halomonas elongata DSM 2581]
 gi|307215631|emb|CBV40901.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Halomonas elongata DSM 2581]
          Length = 476

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 30/128 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E  ++     +  V+  G FD +H GH   LE A ++ +   + V              +
Sbjct: 330 EAVRAAQARGERVVMTNGCFDILHAGHVAYLEHARQLGDRLIVAV-----------NDDA 378

Query: 68  PIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            I  L       +P + + ++L  +G    ++        A  + ++ I+ VL +     
Sbjct: 379 SIARLKGASRPINPLARRMQVLAGLGAVDWVVP------FAEDTPQRLIEAVLPD----- 427

Query: 120 TVITGTKF 127
            ++ G  +
Sbjct: 428 VLVKGGDY 435


>gi|226946487|ref|YP_002801560.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Azotobacter vinelandii DJ]
 gi|259709922|sp|C1DGT9|HLDE_AZOVD RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|226721414|gb|ACO80585.1| LPS biosynthesis protein RfaE [Azotobacter vinelandii DJ]
          Length = 474

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 16/108 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   LEQA    +   + V        ++ +   P   ++    +  
Sbjct: 342 VFTNGCFDILHAGHVTYLEQARAQGDRLIVAV----NDDASVTRLKGPGRPINTVDRRMA 397

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           +L  +G    +I        A  + E+ ++++         ++ G  +
Sbjct: 398 VLAGLGAVDWVI------SFAEDTPERLLEQI-----RPDVLVKGGDY 434


>gi|294887853|ref|XP_002772252.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239876320|gb|EER04068.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 308

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 19/123 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH+  + QA    +   + +     H  ++I  +           + ++L+ 
Sbjct: 25  GCFDIMHSGHYNAIRQAKAQCDILVVGI-----HSDSVITDNKAPPV-MKQEERYELLKH 78

Query: 85  MGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           + +    L    +    A             E       + G          G    L+ 
Sbjct: 79  IKWIDEILYDVPYAPSLATL-----------ERARADFCVHGDDMPVDSSGRGAYDELRD 127

Query: 143 RGE 145
            G+
Sbjct: 128 AGK 130


>gi|167520029|ref|XP_001744354.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777440|gb|EDQ91057.1| predicted protein [Monosiga brevicollis MX1]
          Length = 359

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 17/138 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V A G FD +H GH   L QA  + +   + +     H    I+ +     L+    + K
Sbjct: 16  VYADGCFDLMHFGHANALRQAKALGDILVVGI-----HNDEDIEKNKGPPVLT-QEERYK 69

Query: 81  ILEKMG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +++ +     ++    Y F L+    +   F+               G        ++G 
Sbjct: 70  LVKAVKWVDEVVTDAPYTFNLDFLEQNNCDFVVHGDDITTNAD----GEDAYHIAKKSG- 124

Query: 137 RGILQKRGEKYGFHTVFI 154
               ++     G  T  I
Sbjct: 125 --RYKEYQRTQGVSTTDI 140


>gi|154687687|ref|YP_001422848.1| hypothetical protein RBAM_032870 [Bacillus amyloliquefaciens FZB42]
 gi|308175304|ref|YP_003922009.1| glycerol-3-phosphate cytidylyltransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|154353538|gb|ABS75617.1| TagD [Bacillus amyloliquefaciens FZB42]
 gi|307608168|emb|CBI44539.1| glycerol-3-phosphate cytidylyltransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555277|gb|AEB25769.1| glycerol-3-phosphate cytidylyltransferase [Bacillus
           amyloliquefaciens TA208]
 gi|328913639|gb|AEB65235.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus
           amyloliquefaciens LL3]
          Length = 129

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +LE+A ++ +   + + +                       ++ 
Sbjct: 4   VITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE------FNLQKQKKAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           S +Q ++   V    +   + G  +       G    
Sbjct: 58  ILETIRYVDEVIPEN--------SWDQKVRD--VADHNIDVFVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+ +        +++      +++ +S++ I+  + 
Sbjct: 102 LKDQC-----EVIYLP-----RTEGISTTQIKKEIA 127


>gi|86609860|ref|YP_478622.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|108860877|sp|Q2JJ30|PANCY_SYNJB RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|86558402|gb|ABD03359.1| pantoate--beta-alanine ligase/cytidylate kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 542

 Score = 40.1 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 39/212 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           MH    +   +      +G  V     +G+   +H GH  ++ +  +  ++   TV+S  
Sbjct: 1   MHWLRTVAALREQVADWRGSTVGLVPTMGS---LHEGHLSLIRRCRQECDH---TVVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKIL-EKMGFSALIRYKFTLETAN-----------YSA 104
            +P      +            ++ L E  G   ++      E                 
Sbjct: 55  VNPLQ-FGPNEDWDRYPRDEEGDRALCEAAGVD-VVFAPDPQEMGADPATGSDRTWVMPP 112

Query: 105 EQFIQKVLVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           E  +Q +                L++  ++   +  FG+  A    I+Q+        T 
Sbjct: 113 ESLLQTLCAPHRPGHFRGVATIVLQLLNLVQPQRAYFGQKDAQQLAIIQRLVRDLQIPTT 172

Query: 153 FID--ELRNNKSQIVSSSNIRTALTKGHVLNA 182
            +    +R       SS N R        + A
Sbjct: 173 IVPCSTVREADGLACSSRN-RYLSAAERQVAA 203


>gi|217033797|ref|ZP_03439222.1| hypothetical protein HP9810_877g1 [Helicobacter pylori 98-10]
 gi|216943695|gb|EEC23138.1| hypothetical protein HP9810_877g1 [Helicobacter pylori 98-10]
          Length = 276

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + E +G +A+    F  + +     +  Q++ +
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEGLGVNAV----FLPKISEMYPYEIEQRLKL 106


>gi|15896168|ref|NP_349517.1| pantoate--beta-alanine ligase [Clostridium acetobutylicum ATCC 824]
 gi|24638102|sp|Q97F38|PANC_CLOAB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|15025965|gb|AAK80857.1|AE007789_3 Pantoate--beta-alanine ligase [Clostridium acetobutylicum ATCC 824]
 gi|325510323|gb|ADZ21959.1| Pantoate--beta-alanine ligase [Clostridium acetobutylicum EA 2018]
          Length = 281

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 37/195 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIG-----NFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M + H+I   +      K   + IG      +  +H GH  ++E+A K  +     ++S 
Sbjct: 1   MEILHSISDVKKYIKQWKKEGLTIGLVPTMGY--LHDGHKSLIERASKENDK---VIVSD 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +              ++  K G S L    F  E +    +  +  V    
Sbjct: 56  FVNPIQFGPNEDLDVYPRDLDRDAEVCTKAGASIL----FNPEPSEMYFDDAVTFVNSSK 111

Query: 116 L--------------EVKTVI-------TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
           +               V TV+          +  FG+  A    ++++      F    +
Sbjct: 112 ITDILCGARRPGHFRGVCTVVTKLFNITCPDRAYFGEKDAQQVAVIKRMVRDLNFDIEIV 171

Query: 155 --DELRNNKSQIVSS 167
               +R       SS
Sbjct: 172 ACPIIREEDGLAKSS 186


>gi|224003019|ref|XP_002291181.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972957|gb|EED91288.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 411

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQA---IKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           P+ L   V   G FDG+H GH  +L  A   ++  N   +  ++ +     ++   +   
Sbjct: 248 PSSLYSSVCVGGTFDGMHYGHRKLLTLAISSVQPINGRLLIGITRD----EMLTKKAFAD 303

Query: 71  TLSPPSIQE 79
            +     + 
Sbjct: 304 RIPSLEDRI 312


>gi|325108156|ref|YP_004269224.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose
           1-phosphate adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
 gi|324968424|gb|ADY59202.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose
           1-phosphate adenylyltransferase [Planctomyces
           brasiliensis DSM 5305]
          Length = 510

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH   L+QA  + +   +  ++ +   R +    +    + P   + +
Sbjct: 360 VLTNGCFDVLHIGHVSYLKQAAALGD-CLVVAINSDDSVRRL--GKAADRPIFPAEQRAE 416

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +L  +     ++   F  +    +  Q + ++  + L
Sbjct: 417 MLASLECVDYVVV--FDED----TPHQVLTELRPDVL 447


>gi|291543269|emb|CBL16378.1| cytidyltransferase-related domain [Ruminococcus sp. 18P13]
          Length = 148

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  ++ QA  + +   + V       + + +  +    +     +  +   
Sbjct: 11  GVYDMFHIGHLNLINQAKALCDYLIVGV----NSDQLVERYKNKTPVICQEDRRTIVENI 66

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                 +            A+   +  +++ L    V  G  ++      G+   ++   
Sbjct: 67  KAVDQAVI-----------ADTLDKTEMLQALGFNAVFIGDDWK------GNARWIRTEE 109

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           E   F    +       +  +SS+ +R A
Sbjct: 110 ELRRFGVDVV---YLAHTPDISSTALRKA 135


>gi|291542206|emb|CBL15316.1| Phosphopantetheine adenylyltransferase [Ruminococcus bromii L2-63]
          Length = 161

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 26/157 (16%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G+FD + LGH  ++ +A K+ +   + VL        +  S  PIF++     +
Sbjct: 3   KTVICPGSFDPVTLGHLDVITRASKLFDRVIVGVL--------VNSSKKPIFSI---DER 51

Query: 79  EKILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            ++L+++      +    F    A Y  +  +  + V+ L     +T  ++ F       
Sbjct: 52  IELLKEVTEHLDNVEIVGFNGLLAQYCEDHGVDAI-VKGLRA---VTDFEYEF------- 100

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              +    +K   +   +       S  +SSS +R  
Sbjct: 101 --QMALTNKKLNPNLETLFLTAEADSMYLSSSMVREI 135


>gi|229124780|ref|ZP_04253959.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus cereus 95/8201]
 gi|228658655|gb|EEL14316.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus cereus 95/8201]
          Length = 131

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + V S          +            ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKSLGDHLTVAVSSDE------FNAMKNKKAYHSFEHRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE--VKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E    +   + +   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PECSWDQKKKDVVNKDIDVFVMGDDWN------GEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L+   +      V++      ++  +S++ I+  L
Sbjct: 100 DYLKDYCK-----VVYLP-----RTVGISTTKIKKEL 126


>gi|163847761|ref|YP_001635805.1| pantoate--beta-alanine ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222525628|ref|YP_002570099.1| pantoate--beta-alanine ligase [Chloroflexus sp. Y-400-fl]
 gi|189036417|sp|A9WFR6|PANC_CHLAA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|254778219|sp|B9LIH9|PANC_CHLSY RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|163669050|gb|ABY35416.1| pantoate--beta-alanine ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222449507|gb|ACM53773.1| pantoate/beta-alanine ligase [Chloroflexus sp. Y-400-fl]
          Length = 281

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 8/94 (8%)

Query: 1  MHVFHNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
          M V H +   +         G V  +G    +H GH  ++EQA       P   +S   +
Sbjct: 1  MKVLHTVAEFRQARAAFDVLGFVPTMGY---LHQGHLALVEQAR---RECPAVAVSIFVN 54

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          P     +          +    +LE  G   +  
Sbjct: 55 PTQFGPNEDYARYPRDTNRDLALLEAAGVDLVFI 88


>gi|194750192|ref|XP_001957514.1| GF10448 [Drosophila ananassae]
 gi|190624796|gb|EDV40320.1| GF10448 [Drosophila ananassae]
          Length = 524

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 21/170 (12%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             VV  G FD IH+GH + L QA+  +    +  ++       + +  +    + P   +
Sbjct: 151 PSVVLGGTFDRIHVGHKIFLTQAVLRSRKRLVVGVT----TAAMTKGKTLPDLILPVEER 206

Query: 79  EKILEKM--GFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              L +      + +                 Q    + +       ++   +   G  +
Sbjct: 207 INRLREFLTDIDSTLQYEIVPIDDPF---GPTQTDPDLDM-------IVVSAETLRGGQK 256

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQ--IVSSSNIRTALTKGHVLN 181
             +  + ++      F    ++   ++      VSSSN R  L       
Sbjct: 257 VNEIRLARQLRNLEIFVIDIVESNVHDGIHEAKVSSSNTRIDLLGTRWRR 306


>gi|319776380|ref|YP_004138868.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Haemophilus influenzae F3047]
 gi|317450971|emb|CBY87200.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Haemophilus influenzae F3047]
          Length = 476

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +HLGH   LE A K+ +   + V S +   R  ++  S    ++    +  
Sbjct: 343 VMTNGCFDILHLGHVSYLENARKLGDRLIVAVNSDDSVKR--LKGDSRP--INNLENRMA 398

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     L+   FT +    + ++ I ++L + L     + G  ++
Sbjct: 399 VLAGLASVDWLV--PFTED----TPQRLIGEILPDLL-----VKGGDYK 436


>gi|329962124|ref|ZP_08300135.1| pantoate--beta-alanine ligase [Bacteroides fluxus YIT 12057]
 gi|328530772|gb|EGF57630.1| pantoate--beta-alanine ligase [Bacteroides fluxus YIT 12057]
          Length = 281

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 69/207 (33%), Gaps = 39/207 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + L+      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIVHTIKDLQAGLSALRAQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P      +  +     P    ++LE  G + +    F         E   ++    
Sbjct: 58  ---NPTQFNDKNDLVKYPRTPEADCRLLEDCGAAFV----FAPSVEEMYPEPDTRQFSYA 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V  ++             FG+       I+++   +  F    
Sbjct: 111 PLDTVMEGAFRPGHFNGVCQIVSKLFDAVKPDRAYFGEKDFQQLAIIREMVRQMKFPLEI 170

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGH 178
           +    +R +    +SS N R ++ +  
Sbjct: 171 VGCPIVREDGGLALSSRNARLSVEERK 197


>gi|282897030|ref|ZP_06305032.1| Cytidylate kinase [Raphidiopsis brookii D9]
 gi|281197682|gb|EFA72576.1| Cytidylate kinase [Raphidiopsis brookii D9]
          Length = 527

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 64/208 (30%), Gaps = 41/208 (19%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
              Q  PN + G V  +G    +HLGH  ++++A +        V+S   +P        
Sbjct: 19  RDTQQCPNSI-GLVPTMG---ALHLGHLSLIQKAREEN---YTVVVSIFINPLQ-FGPLE 70

Query: 68  PIFTLSPPSIQEKIL-EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG-- 124
                      +K+  E+ G  A+     + E    S +   +  + + L    +I G  
Sbjct: 71  DYQRYPRTWEGDKLFCEQAGVDAIFAP--SPEEMGISRKNIQENQVTQVLPASGMINGLC 128

Query: 125 ------------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELR 158
                                    +  FGK       I+++      F    I    +R
Sbjct: 129 ASYRPGHFQGVTTIVTKLFNVVQPDRAYFGKKDGQQLAIIKRLVADLNFPIEIIACPTVR 188

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
                 +SS N    LT      AA L 
Sbjct: 189 EASGLALSSRN--QYLTDTEKEQAALLY 214


>gi|269837779|ref|YP_003320007.1| cytidyltransferase-related domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787042|gb|ACZ39185.1| cytidyltransferase-related domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 171

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 28/179 (15%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTII 63
            + + L    K  V   G+FD +H+GH   L+ A  + +   + V    ++     R   
Sbjct: 12  RLGERLRAEGKRVVFTNGHFDLLHVGHLRYLQAARALGDTLIVGVNDDAVT-----RLRK 66

Query: 64  QSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
               P   + P   + +++  +     ++           +AE       V  L     +
Sbjct: 67  GPGRP---IVPEEERAELVAGLACVDYVVI------FHEETAEAA-----VARLRPDIYV 112

Query: 123 TGTKFRF--GKDRAGDRGILQKR-GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            G  +     ++RAG + + +      YG     +  +    +  +    IR       
Sbjct: 113 KGGDYAIDEAEERAGKQPLPEAAVVRGYGGEVRTVPLVPGRSTTDI-VRRIREMSDARE 170


>gi|168207468|ref|ZP_02633473.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens E str.
           JGS1987]
 gi|170661162|gb|EDT13845.1| [citrate (pro-3S)-lyase] ligase [Clostridium perfringens E str.
           JGS1987]
          Length = 345

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 27/171 (15%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-----FN------------PHPRTIIQSSSPIFTLSP 74
            GH  ++E+A K  +   + +L+     F+             H + ++   +  + +S 
Sbjct: 170 KGHKYLIEKASKENDVVHLFILTEDKSEFSTEDRINMVKLGTKHLKNVLIHEAWKYIISS 229

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            +     +++           T   A         + + + L +K    G +  F     
Sbjct: 230 ATFPSYFIKEQK-------NITKAHAYLD-LTLFCEYISKALNIKYRYVGEE-PFSNLTN 280

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
                +++   KY    + +  L+ N  + +S+S++R+ L +G++     L
Sbjct: 281 EYNQYMKEILPKYNIQVIEVKRLKEN-GKAISASSVRSFLKEGNLEKVESL 330


>gi|329121959|ref|ZP_08250571.1| [citrate [pro-3S]-lyase] ligase [Dialister micraerophilus DSM
           19965]
 gi|327467257|gb|EGF12760.1| [citrate [pro-3S]-lyase] ligase [Dialister micraerophilus DSM
           19965]
          Length = 359

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 26/169 (15%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-- 90
           GH  ++E AI   +     V+ F       I   S  F+L    I++ +        +  
Sbjct: 159 GHRSLIEYAINNCDE----VIIFAVQEDRSIFPFSDRFSL----IKQGVAHMHNVEVVSG 210

Query: 91  ------------IRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
                          K T E A  +          +   L +     G +       A +
Sbjct: 211 GDFIISNATFPTYFIKGTDELAAQTKLDATVFATRIAPALNITVRFVGEEPTDMTTNAYN 270

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             + ++   + G     I       +Q+VS+S++R AL          +
Sbjct: 271 NAM-REVFSENGIELKVIPR-EQKGNQVVSASSVRNALAHDDWETVRRM 317


>gi|310778938|ref|YP_003967271.1| pantothenate synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748261|gb|ADO82923.1| pantothenate synthetase [Ilyobacter polytropus DSM 2926]
          Length = 281

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V  +I   +   N  K      G V  +G    +H GH  ++E+A    +   ++V  
Sbjct: 1   MEVLRSISEIKEKVNEWKSNGLSVGFVPTMGY---LHAGHKSLIEKASSENDRVVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P+     +      S     + ++   G   +    F    A    + F   V +E
Sbjct: 58  ---NPKQFDNENDLETYPSNLQGDKALIAGAGGDII----FAPTAAEMYPDGFATLVDIE 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V TV+             FG+       I+++  +        
Sbjct: 111 GLDKELCGATRPGHFRGVCTVVTKLFLIVTPDRAYFGEKDFQQLAIIKRFTKDLNIPVEI 170

Query: 154 I--DELRNNKSQIVSS 167
           I    +R      +SS
Sbjct: 171 IGCPIVREEDGLAMSS 186


>gi|88860063|ref|ZP_01134702.1| hypothetical protein PTD2_18665 [Pseudoalteromonas tunicata D2]
 gi|88818057|gb|EAR27873.1| hypothetical protein PTD2_18665 [Pseudoalteromonas tunicata D2]
          Length = 139

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 43/113 (38%), Gaps = 28/113 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           ++ +G FD  H+GH  +LE++  + +   I V    ++                     +
Sbjct: 5   ILVVGVFDLFHVGHLTLLEKSKALGDKLFIIVNGDKMT----------GEYKRTPYINEN 54

Query: 77  IQEKILEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            +++++E +     A+I  +F +            K  +E   +  ++ G  +
Sbjct: 55  DRKRLIEALDIVDEAVISNEFDI------------KPYIEQFNITKIVHGDDW 95


>gi|313891911|ref|ZP_07825513.1| [citrate (pro-3S)-lyase] ligase [Dialister microaerophilus UPII
           345-E]
 gi|313119686|gb|EFR42876.1| [citrate (pro-3S)-lyase] ligase [Dialister microaerophilus UPII
           345-E]
          Length = 359

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 26/169 (15%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-- 90
           GH  ++E AI   +     V+ F       I   S  F+L    I++ +        +  
Sbjct: 159 GHRSLIEYAINNCDE----VIIFAVQEDRSIFPFSDRFSL----IKQGVAHMHNVEVVSG 210

Query: 91  ------------IRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
                          K T E A  +          +   L +     G +       A +
Sbjct: 211 GDFIISNATFPTYFIKGTDELAAQTKLDATVFATRIAPALNITVRFVGEEPTDMTTNAYN 270

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             + ++   + G     I       +Q+VS+S++R AL          +
Sbjct: 271 NAM-REVFSENGIELKVIPR-EQKGNQVVSASSVRNALAHDDWETVRRM 317


>gi|289764690|ref|ZP_06524068.1| LOW QUALITY PROTEIN: ligase [Fusobacterium sp. D11]
 gi|289716245|gb|EFD80257.1| LOW QUALITY PROTEIN: ligase [Fusobacterium sp. D11]
          Length = 212

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 64/188 (34%), Gaps = 20/188 (10%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 23  LGHQYLVEKASSENDILHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 82

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 83  ATFPSYFQKDEVAVI---ESQANLDIEIFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 137

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIH 198
           +L+K  E      + +   + + +  +S+S +R  +  G++ +   L+            
Sbjct: 138 MLKKLPE-NNIECIVVPRKKYSDNV-ISASTVRQIIKNGNLEDLKSLVPETTYNYFLSDE 195

Query: 199 GEKIGRTL 206
            + I   +
Sbjct: 196 AKAIIDKI 203


>gi|217031751|ref|ZP_03437255.1| hypothetical protein HPB128_155g64 [Helicobacter pylori B128]
 gi|298737110|ref|YP_003729640.1| pantoate-beta-alanine ligase [Helicobacter pylori B8]
 gi|216946598|gb|EEC25198.1| hypothetical protein HPB128_155g64 [Helicobacter pylori B128]
 gi|298356304|emb|CBI67176.1| pantoate-beta-alanine ligase [Helicobacter pylori B8]
          Length = 276

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 39/199 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K   ++ ++V     
Sbjct: 1   MRVLETIAALREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENPHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-- 115
           +P     +        P      + E +G +A+    F  E +     +  Q++ +    
Sbjct: 55  NPTQFGANEDFSTYPRPLEKDLALCEGLGVNAV----FAPERSEMYPYEIEQRLKLYAPK 110

Query: 116 ----------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
                                 L++  ++  T+  FGK  A    I++   +        
Sbjct: 111 FLSSSLEGAVRHGHFDGVVQVVLKMFHLVNPTRAYFGKKDAQQLLIIEHLVKDLLLDIEI 170

Query: 154 IDE--LRNNKSQIVSSSNI 170
           +    +R++    +SS N+
Sbjct: 171 VPCEIVRDSDHLALSSRNV 189


>gi|282862468|ref|ZP_06271530.1| cytidyltransferase-related domain protein [Streptomyces sp. ACTE]
 gi|282562807|gb|EFB68347.1| cytidyltransferase-related domain protein [Streptomyces sp. ACTE]
          Length = 149

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 26/152 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S      T+ +   P+    P   + +I+  
Sbjct: 11  GVYDLFHVGHLNILRHARSQCDYLVAGVVSDEM--ATLAKGHKPVI---PLRERLEIVRS 65

Query: 85  MGFSALIRYKF-TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                    +F          ++      V +     +  G  +R         G  +  
Sbjct: 66  --------VRFVDAAFVETVPDKIETWQQVRF---DVIFKGNDWR---------GTDKGA 105

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             +  F  V ++ +    +   SS+ +R AL 
Sbjct: 106 RLERDFAEVGVEVVYFPYTVHTSSTQLRRALD 137


>gi|89075916|ref|ZP_01162291.1| putative ADP-heptose synthase [Photobacterium sp. SKA34]
 gi|89048357|gb|EAR53935.1| putative ADP-heptose synthase [Photobacterium sp. SKA34]
          Length = 476

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V        ++     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLTEAAKLGDRLIVAV----NSDSSVKGLKGPGRPVNPEDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   FT E    + ++ I +VL        ++ G  ++
Sbjct: 399 VLAGLGAVDWVV--PFTEE----TPQRLISEVL-----PSILVKGGDYK 436


>gi|317014727|gb|ADU82163.1| probable nicotinate-nucleotide adenylyltransferase [Helicobacter
           pylori Gambia94/24]
          Length = 171

 Score = 39.8 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 15/160 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I+EQ +++   + + VL   P  +   +   P F  +    +E  +  
Sbjct: 15  GSFDPLHKAHLAIIEQTLELLPFAQLIVL---PAYQNPFK--KPCFLDAKTRFKELEIAL 69

Query: 85  MGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            G   ++   F    E A  + E  +    +   +   ++ G           +   L K
Sbjct: 70  KGMPRVLLSDFEIKQERAVPTIESVLHFQKLYHPKTLYLVIGADCLRHLSSWTNATELLK 129

Query: 143 RGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           R E   F  +  +E++              +SSS IR +L
Sbjct: 130 RVELVVFERIGYEEIQFKGHYFPLKGIDAPISSSAIRASL 169


>gi|283956992|ref|ZP_06374464.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791493|gb|EFC30290.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 386

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDTNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|237737897|ref|ZP_04568378.1| citrate lyase synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419777|gb|EEO34824.1| citrate lyase synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 53/177 (29%), Gaps = 39/177 (22%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL- 90
           LGH  ++E+                     +++     F   P  I+ ++++K G S L 
Sbjct: 156 LGHQYLIEKVASENEEVL----------VFVVEEDKSAF---PFKIRYELVQK-GVSHLS 201

Query: 91  ---------IRYK---FTLETANYSAEQFIQKVLVEW----------LEVKTVITGTKFR 128
                           F         +  I+   ++           L +     G +  
Sbjct: 202 NVKVIEGTEYIISSATFPNYFLRKEDDALIEYTKLDASVCGEKFGKILNINKRYVGEEPY 261

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
                  +   L++   KY    V +   +  + + +S+S +R  L + +      L
Sbjct: 262 CKVTNTYN-NTLKEILPKYNIEVVVVPR-KEVEGKAISASYVRELLKEENFQEIKKL 316


>gi|148270788|ref|YP_001245248.1| pantoate--beta-alanine ligase [Thermotoga petrophila RKU-1]
 gi|189036441|sp|A5IN99|PANC_THEP1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|147736332|gb|ABQ47672.1| pantothenate synthetase [Thermotoga petrophila RKU-1]
          Length = 280

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MKIIETIEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARDEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LEK     +    +   +  + + Y  E  + K
Sbjct: 55  IFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYPPDFSTYVEETKLSK 114

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 115 HLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 174

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 175 IVREPDGLAMSSRNV 189


>gi|325119457|emb|CBZ55010.1| putative phosphoethanolamine cytidylyltransferase [Neospora caninum
           Liverpool]
          Length = 1141

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 65/210 (30%), Gaps = 45/210 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITV------LSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G FD +H GH   L QA ++     + V       +F         ++     +   + +
Sbjct: 566 GVFDLLHSGHFNALRQARQL--GGKLVVGICSDAATF---------AAKKCRPIYTETER 614

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            +I+        +I             E  +Q +  + L       G  +  G D     
Sbjct: 615 AEIVRGCKWVDEVIV--------GTPYEVSVQML--DRLNCAFAAHGDDWVVGADGTDAY 664

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGHVLN-----AAHLLGYRF 190
              ++ G    F           +++ +S+S I  R      +V       AA L    F
Sbjct: 665 AGPRQAGRMKLFK----------RTEGISTSTIVSRLLQATANVEQRRRRGAAALGDDLF 714

Query: 191 TIESDVIHGEKIGRTLGFPTANMQLSPDIL 220
             E  V       + +  PT   + + D L
Sbjct: 715 EGEKPVKSTLSRNQAVTQPTRVQRFARDSL 744


>gi|323357027|ref|YP_004223423.1| ADP-heptose synthase, biproductal sugar kinase/adenylyltransferase
           [Microbacterium testaceum StLB037]
 gi|323273398|dbj|BAJ73543.1| ADP-heptose synthase, biproductal sugar kinase/adenylyltransferase
           [Microbacterium testaceum StLB037]
          Length = 494

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 14/108 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V A G FD +H GH  +L +A  + +   + V S +     +   + P   L P + +  
Sbjct: 361 VFANGVFDLLHAGHVALLREARSLGDVLVVGVNS-DESTARLKGPTRP---LQPQADRMS 416

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +LE     A+    F       +  + I+ +         ++ G+ +R
Sbjct: 417 VLE-----AVRYVDFVTVFGEDTPRELIRAI-----RPDVIVKGSDYR 454


>gi|238854192|ref|ZP_04644539.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           202-4]
 gi|282851194|ref|ZP_06260559.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           224-1]
 gi|300361091|ref|ZP_07057268.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|311110254|ref|ZP_07711651.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           MV-22]
 gi|238833268|gb|EEQ25558.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           202-4]
 gi|282557162|gb|EFB62759.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           224-1]
 gi|300353710|gb|EFJ69581.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|311065408|gb|EFQ45748.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus gasseri
           MV-22]
          Length = 128

 Score = 39.8 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 57/156 (36%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A  + +   + + +         + S      +  + ++ 
Sbjct: 4   IITYGTFDLLHYGHIRLLKRARALGDYLIVGLST-----DEFNEFSKHKQAYNNYAERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             E + QK+  V+  ++ T + G  +       G   
Sbjct: 59  ILEAIRYVDQVI-----------PEENWDQKISDVQKYDIDTFVMGNDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   +               ++  +S++ I+  L
Sbjct: 102 FLKPYCKVKYLE----------RTPGISTTQIKEDL 127


>gi|294138881|ref|YP_003554859.1| bifunctional protein hldE [Shewanella violacea DSS12]
 gi|293325350|dbj|BAJ00081.1| bifunctional protein hldE [Shewanella violacea DSS12]
          Length = 476

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 60/169 (35%), Gaps = 41/169 (24%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           +  V+  G FD +H GH   L++A  + +   + V            +   +  L     
Sbjct: 341 ERVVMTNGCFDILHAGHVSYLQEARALGDRLIVAV-----------NNDDSVKRLKGDGR 389

Query: 73  --SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +P   +  +L  +     ++   F+ +    + ++ I  +L + L     + G  ++ 
Sbjct: 390 PVNPLDRRMAVLAGLASVDWVV--PFSED----TPQRIISHLLPDML-----VKGGDYKI 438

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +D AG + ++           V +    +     +S++ I   +    
Sbjct: 439 -EDIAGGKEVMAA------GGVVKVLCFEDG----ISTTKIIENIMASQ 476


>gi|94970814|ref|YP_592862.1| bifunctional ADP-heptose synthase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552864|gb|ABF42788.1| RfaE bifunctional protein, domain II [Candidatus Koribacter
           versatilis Ellin345]
          Length = 223

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 20/111 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFTLSPPSIQ 78
           V   G FD +H+GH  +LE+A ++     I  ++ +   +++  ++  S    L     +
Sbjct: 90  VFTNGCFDLLHVGHVTLLEEARRLGTRL-IVAINSD---KSVSKLKGESRP--LVGEKER 143

Query: 79  EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            K+L  +    A+    F                 ++ L+   ++ G  + 
Sbjct: 144 AKLLAALASVDAVTI--FDES---------TPLECIKALQPDVLVKGGDYS 183


>gi|72162595|ref|YP_290252.1| cytidyltransferase-like protein [Thermobifida fusca YX]
 gi|71916327|gb|AAZ56229.1| cytidyltransferase-related [Thermobifida fusca YX]
          Length = 167

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 14 PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTL 72
          P   +   V  G FD +H+GH   L+         P+ V +  +   R       P   +
Sbjct: 22 PTSAERPAVVTGAFDILHVGHVRYLKSVRA--RGFPLLVGVESDERVRAWKGPGRP---I 76

Query: 73 SPPSIQEKILEKMG-FSALIRY 93
          +P   + +IL ++     +   
Sbjct: 77 NPAEERAEILAELSCVDGVFII 98


>gi|291548782|emb|CBL25044.1| pantothenate synthetase [Ruminococcus torques L2-14]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 89/284 (31%), Gaps = 53/284 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIG-----NFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M V   ++  + L  + K     IG      F  +H GH  ++++  +  +   I V+S 
Sbjct: 1   MKVTKTVKETRDLIKNWKREGKTIGLVPTMGF--LHEGHASLIKRCREEND---IVVVSD 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +              ++ E +G   +I +    +  +          L + 
Sbjct: 56  FVNPTQFGPTEDLEAYPRDFKRDSELCESLGAD-VIFHPEPEDMYHDPHAFVSIDTLSDT 114

Query: 116 LEVKT-----------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DE 156
           L  KT                 ++T  +  FG+  A    I++K  +   F    +    
Sbjct: 115 LCGKTRPIHFKGVCTVVSKLFNIVTPDRAYFGQKDAQQLAIIRKMVQDLNFDIQIVGCPI 174

Query: 157 LRNNKSQIVSSS-------NIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFP 209
           +R       SS          + AL     + A   +  + +   +V+  +        P
Sbjct: 175 IREEDGLAKSSRNTYLSEEERKAALCLSRAVKAGQNMICKGSKAEEVLT-KMREIIEAEP 233

Query: 210 TANMQ---------------LSPDILLKEGVYAIRFRTQDQTSY 238
            A +                +  D+L+   VY  + R  D  SY
Sbjct: 234 LAKIDYVSMVDALNMQPVEVVEKDVLVAMAVYIGKTRLIDNFSY 277


>gi|239995102|ref|ZP_04715626.1| glycerol-3-phosphate cytidylyltransferase [Alteromonas macleodii
           ATCC 27126]
          Length = 151

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 35/169 (20%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            VV  G FD  H+GH  +L++   + +   + + S          +      + P   ++
Sbjct: 3   TVVTYGTFDLFHIGHVRLLKRLHSLGDRLVVGLSSDE------FNTVKGKNVVIPYEDRK 56

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK-FRFGKDRAGDR 137
           +IL        +              EQ  + +  E         G   F  G D  G  
Sbjct: 57  EILLSCRYVDDV--------FQENCWEQKREDLERE---------GADIFAMGDDWIGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             LQ            +  +   ++Q VS++ ++T +++        L 
Sbjct: 100 DDLQD----------IVKVVYLPRTQDVSTTELKTVISEIQNEKIRQLQ 138


>gi|85715915|ref|ZP_01046893.1| putative cytidylyltransferase [Nitrobacter sp. Nb-311A]
 gi|85697322|gb|EAQ35202.1| putative cytidylyltransferase [Nitrobacter sp. Nb-311A]
          Length = 153

 Score = 39.8 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 35/168 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++   + +   +   +                ++   + + +
Sbjct: 4   VITYGTFDLFHVGHVRLLQRLRSLGDRLIVGCSTDE------FNDIKGKKSVIRYNERAE 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDR 137
           IL        +I             E+  ++    +   +V+    G  +       G  
Sbjct: 58  ILSSCKYVDLVI------------PEETWEQKSSDIRKHDVRIFAMGDDW------VGKF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             L     + G    ++      ++  VS+++I+  L K      A +
Sbjct: 100 DHL---SAETGCIVTYVS-----RTSNVSTTDIKGYLRKIDSDTIASM 139


>gi|307556204|gb|ADN48979.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli ABU 83972]
          Length = 326

 Score = 39.8 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 65/233 (27%), Gaps = 43/233 (18%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFTLS 73
           +G F  +H GH  ++  A+       I   S    P            +    + I  L+
Sbjct: 2   VGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRFPQATILVLT 61

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRFGK 131
           P     +++ +    A+       +        ++  + ++ L  +   V T   +  G 
Sbjct: 62  P-----ELVARYNLPAIPHNDADADI----HRHYVATLCLQILRCRPHAVFTAEDYGDGF 112

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFT 191
                         ++      +   R    +  S + IR+ + +   + A  +      
Sbjct: 113 ANV--------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSFVR 164

Query: 192 IESDVIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
               +        TL              L +G   VY   F        +G+
Sbjct: 165 RICLLGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 206


>gi|225848075|ref|YP_002728238.1| bifunctional protein RfaE, domain II [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643573|gb|ACN98623.1| bifunctional protein RfaE, domain II [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 149

 Score = 39.8 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 23/168 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +++ + L    K  V   G FD IH GH   LE+A  +  N  I  L+ +   R +    
Sbjct: 4   LKVVEELKKEGKKIVFTNGCFDIIHAGHVDYLEKAKSLG-NFLIVGLNSDESVRRLKGKD 62

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   ++P   ++K+L  +     +I ++        + E+ I+++         ++ G 
Sbjct: 63  RP---INPQDQRKKVLSALKPVDLVIIFEED------TPERLIKEI-----RPDVLVKGG 108

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
            ++       D        + YG     ID + +  +  +  S IR+ 
Sbjct: 109 DWKIENIVGADF------VKSYGGQVFTIDFVYDTSTSKI-ISKIRSL 149


>gi|38234557|ref|NP_940324.1| pantoate--beta-alanine ligase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38200820|emb|CAE50524.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 259

 Score = 39.8 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 74/263 (28%), Gaps = 57/263 (21%)

Query: 29  GIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
           G+H GH  +L  A +I     I             Q   P F             + G  
Sbjct: 37  GVHAGHRALLRAARRIPGGIVIVA----------SQHDDPAF------------AEEGVD 74

Query: 89  ALIRYKFTLETA--------NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           A+  Y+   E               Q + + +   + +  ++  +   FG+    D  +L
Sbjct: 75  AVFLYE-PEELRTLIQVPSIGMQPAQELSEAVTRRITLMNLVGPSDVIFGEK---DYELL 130

Query: 141 ---QKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
              Q+       H     +  +R      +S       + +    +A  L          
Sbjct: 131 VRTQQALNDLNIHVTVHSVPTVRMPDGIAIS--LRNATVPEQDREHALALSAAITAGAHA 188

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGP 255
              G++         A ++++  +L   GV      T D      + N G  P       
Sbjct: 189 AEDGKE---------AVLRVAHQVLESAGV------TPDYVELRAM-NLGEAPKTGDARL 232

Query: 256 LLLESFIFDFSQEIYGQRCTVSF 278
            +  +F      +  G    V F
Sbjct: 233 FVAATFGDVQLTDNAGVPVGVGF 255


>gi|78222142|ref|YP_383889.1| D-beta-D-heptose 1-phosphate
           adenylyltransferase/D-alpha,beta-D-heptose 7-phosphate
           1-kinase [Geobacter metallireducens GS-15]
 gi|119365065|sp|Q39X60|HLDE_GEOMG RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|78193397|gb|ABB31164.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Geobacter
           metallireducens GS-15]
          Length = 490

 Score = 39.8 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 28/118 (23%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           K  V   G FD +H+GH   L++A    +      NS  +V          ++       
Sbjct: 352 KKIVFTNGCFDLLHVGHVKYLQKAKSYGDVLVLGLNSDASV--------RRLKGEKRP-- 401

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           L   + +  IL  +     ++   F  +    +  + I     E L+   ++ G  + 
Sbjct: 402 LIDEAERAHILAALDCIDYVVI--FDED----TPLRLI-----ETLKPAVLVKGGDYT 448


>gi|325954609|ref|YP_004238269.1| Pantothenate synthetase [Weeksella virosa DSM 16922]
 gi|323437227|gb|ADX67691.1| Pantothenate synthetase [Weeksella virosa DSM 16922]
          Length = 281

 Score = 39.8 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 12/98 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M +F        +    +      G V  +G    +H GH  +++QA K      + V+S
Sbjct: 1  MKIFRTQTEMSPVLQKTRENGETIGFVATMG---ALHQGHLALIQQAKKENE---VVVVS 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +P                     +L       L  
Sbjct: 55 IFVNPTQFNNPEDLAKYPRTEEKDIVLLSDSNCDFLYL 92


>gi|219848393|ref|YP_002462826.1| cytidyltransferase-related domain-containing protein [Chloroflexus
           aggregans DSM 9485]
 gi|219542652|gb|ACL24390.1| cytidyltransferase-related domain protein [Chloroflexus aggregans
           DSM 9485]
          Length = 170

 Score = 39.8 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 20/134 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH   L+ A  + +   I  ++ +   R +     P   + P   +  
Sbjct: 26  VLTNGVFDLVHIGHINYLKAARALGDRL-IVAINSDKSTRHLKGPLRP---IVPAMERAT 81

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +    A+         A  +AE      +V  L+    + G  +  G   A D   
Sbjct: 82  IIAALRCVDAVTI------FAERTAE-----TVVATLKPDLYVKGGDY--GNGNAIDETR 128

Query: 140 LQKRG--EKYGFHT 151
           L +      YG   
Sbjct: 129 LPEARIARAYGGEV 142


>gi|315287849|gb|EFU47251.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 110-3]
          Length = 332

 Score = 39.8 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 65/229 (28%), Gaps = 33/229 (14%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +G F  +H GH  ++  A+       I   S    P        P   L+   ++   
Sbjct: 8   LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDC-----EPEKRLTWLQVRFPQ 62

Query: 82  LEKMGFSALIRYKFT-LETANYSA---EQFIQKVLVEWLEVK--TVITGTKFRFGKDRAG 135
              +  +  +  ++      +  A     ++  + ++ L  +   V T   +  G     
Sbjct: 63  ATILVLTPELVARYNLPAIPHNDADIHRHYVATLCLQILRCRPHAVFTAEDYGDGFANV- 121

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                     ++      +   R    +  S + IR+ + +   + A  +          
Sbjct: 122 -------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSFVRRICL 174

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
           +        TL              L +G   VY   F        +G+
Sbjct: 175 LGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 212


>gi|222619086|gb|EEE55218.1| hypothetical protein OsJ_03085 [Oryza sativa Japonica Group]
          Length = 383

 Score = 39.8 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 33/194 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V+H    + S+  +    ++  G+F+ +H GH  +LE A  + ++       F     
Sbjct: 197 MKVYH---FSDSMDKNFNRKIILPGSFNPLHDGHLRLLEVASSMCDDGLPC---FE---I 247

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWL 116
           + I +  P  +++    + +   K+G + +I    +  + A     SA           +
Sbjct: 248 SAINADKPPLSIAEIKRRVEQFRKVGKNVIISNQPYFYKKAELFPGSAFVIGADTAARLV 307

Query: 117 EVKTVITGTKF---------------RF---GKDRAGDRGILQKRGEKYGFHTVFIDELR 158
             K    G  +                F   G++  G   +L+          +FI    
Sbjct: 308 NPKY--YGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPE 365

Query: 159 NNKSQIVSSSNIRT 172
                 +SS++IR 
Sbjct: 366 EKFRMDISSTDIRK 379


>gi|218188885|gb|EEC71312.1| hypothetical protein OsI_03345 [Oryza sativa Indica Group]
          Length = 383

 Score = 39.8 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 33/194 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V+H    + S+  +    ++  G+F+ +H GH  +LE A  + ++       F     
Sbjct: 197 MKVYH---FSDSMDKNFNRKIILPGSFNPLHDGHLRLLEVASSMCDDGLPC---FE---I 247

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWL 116
           + I +  P  +++    + +   K+G + +I    +  + A     SA           +
Sbjct: 248 SAINADKPPLSIAEIKRRVEQFRKVGKNVIISNQPYFYKKAELFPGSAFVIGADTAARLV 307

Query: 117 EVKTVITGTKF---------------RF---GKDRAGDRGILQKRGEKYGFHTVFIDELR 158
             K    G  +                F   G++  G   +L+          +FI    
Sbjct: 308 NPKY--YGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPE 365

Query: 159 NNKSQIVSSSNIRT 172
                 +SS++IR 
Sbjct: 366 EKFRMDISSTDIRK 379


>gi|91213581|ref|YP_543567.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli UTI89]
 gi|117626325|ref|YP_859648.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli APEC O1]
 gi|218561128|ref|YP_002394041.1| transcriptional regulator [Escherichia coli S88]
 gi|237703615|ref|ZP_04534096.1| NadR transcriptional repressor/NMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|91075155|gb|ABE10036.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli UTI89]
 gi|115515449|gb|ABJ03524.1| NadR transcriptional repressor / NMN adenylyltransferase
           [Escherichia coli APEC O1]
 gi|218367897|emb|CAR05692.1| putative transcriptional regulator [Escherichia coli S88]
 gi|226901527|gb|EEH87786.1| NadR transcriptional repressor/NMN adenylyltransferase [Escherichia
           sp. 3_2_53FAA]
 gi|294491962|gb|ADE90718.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli IHE3034]
 gi|307629107|gb|ADN73411.1| putative transcriptional regulator [Escherichia coli UM146]
 gi|323950398|gb|EGB46279.1| nicotinamide-nucleotide adenylyltransferase [Escherichia coli H252]
 gi|323954480|gb|EGB50264.1| nicotinamide-nucleotide adenylyltransferase [Escherichia coli H263]
          Length = 340

 Score = 39.8 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 65/229 (28%), Gaps = 33/229 (14%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +G F  +H GH  ++  A+       I   S    P        P   L+   ++   
Sbjct: 16  LVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDC-----EPEKRLTWLQVRFPQ 70

Query: 82  LEKMGFSALIRYKFT-LETANYSA---EQFIQKVLVEWLEVK--TVITGTKFRFGKDRAG 135
              +  +  +  ++      +  A     ++  + ++ L  +   V T   +  G     
Sbjct: 71  ATILVLTPELVARYNLPAIPHNDADIHRHYVATLCLQILRCRPHAVFTAEDYGDGFANV- 129

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
                     ++      +   R    +  S + IR+ + +   + A  +          
Sbjct: 130 -------LARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSFVRRICL 182

Query: 196 VIHGEKIGRTLGFPTANMQLSPDILLKEG---VYAIRFRTQDQTSYSGV 241
           +        TL              L +G   VY   F        +G+
Sbjct: 183 LGGESTGKSTL-----------SKALADGLDTVYVAEFGRDYWEEKNGI 220


>gi|56695031|ref|YP_165377.1| pantoate--beta-alanine ligase [Ruegeria pomeroyi DSS-3]
 gi|81558768|sp|Q5LWR2|PANC_SILPO RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|56676768|gb|AAV93434.1| pantoate--beta-alanine ligase [Ruegeria pomeroyi DSS-3]
          Length = 285

 Score = 39.8 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 35/194 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++  A    +     V++   +P+                  
Sbjct: 27  GVVPTMG---ALHDGHLSLVAAAKAGCDR---VVVTIFVNPKQFNNPEDLAKYPRTELAD 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVIT- 123
              L   G  A+              E F   V V  L               V TV+  
Sbjct: 81  ASKLAPYGVDAIYVPDPD----QIYPEGFATTVSVSGLTDVMEGACRPGHFDGVATVVAK 136

Query: 124 -----GTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALT 175
                G     FG+       ++ +  +        +    +R      +SS N+R  L+
Sbjct: 137 LFLQTGADQAYFGEKDYQQMMLVTRMAQDLDIPITVVGCPTVREASGLAMSSRNMR--LS 194

Query: 176 KGHVLNAAHLLGYR 189
              +  A  L    
Sbjct: 195 AEGLERAGRLHPVM 208


>gi|328869037|gb|EGG17415.1| hypothetical protein DFA_08410 [Dictyostelium fasciculatum]
          Length = 448

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 64/174 (36%), Gaps = 20/174 (11%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILE-QAIKIANNSPITVLSFNPH-PRTIIQSSSPIFTLS 73
            L   V   G+FD +H GH  IL   AI       + VL   P  P++     +P   L 
Sbjct: 247 QLYDNVFTGGHFDHLHNGHRFILSIGAITSGKGFLVAVL--EPSAPQS--PCKAPSKQLH 302

Query: 74  P----PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF-- 127
                P  +EK     G    +   F    AN   ++  +   +    +  + T      
Sbjct: 303 SFGQSPDQREK-----GVRDFLSI-FAPNHANLEIQRNERCSNIANCPMTVIATEHDALI 356

Query: 128 -RFGKDRAGD-RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
             F    +G     ++++     F    I E++      +SS+NIR  L+ GH+
Sbjct: 357 LPFHLLESGSKINEIRQQRSLQPFSLHAIPEIQTPNVGTLSSTNIRRILSTGHL 410


>gi|332160456|ref|YP_004297033.1| pantoate--beta-alanine ligase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664686|gb|ADZ41330.1| pantoate--beta-alanine ligase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859184|emb|CBX69535.1| pantothenate synthetase [Yersinia enterocolitica W22703]
          Length = 284

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 39/225 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDAKTRAD---VVVVSIFVNPMQFERPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALI------RYKFTLETANYSAEQFIQKVLVEWL-----------EVKTVI--- 122
            + G   +        Y      A   A+ ++    +  +            V T++   
Sbjct: 83  TRHGVDLVFAPAAADVYP-----AGLEAQTYVDVPALSTILEGASRPGHFRGVSTIVSKL 137

Query: 123 ---TGTK-FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTK 176
                     FG+       +++K     G+    V +  +R      +SS N    L+ 
Sbjct: 138 FNLVQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSSRN--GYLSA 195

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
             +  A  L      +   +  GE+    L   TA          
Sbjct: 196 EELKIAPQLYKIMQALAEKLALGERQIDDLLADTAEQLRDAGFTP 240


>gi|324112307|gb|EGC06285.1| nicotinamide-nucleotide adenylyltransferase [Escherichia fergusonii
           B253]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE-- 79
           + +G F  +H GH  ++  A+       I   S    P        P   LS   ++   
Sbjct: 16  LVVGKFAPLHCGHERLINTALAQCEELYIISYSVPEMP-----GCEPEKRLSWLQLRFPR 70

Query: 80  --------KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
                   +++     +A+       +        ++  + ++ L  +   V T   +  
Sbjct: 71  ANILVLTPELVASYNLTAIPPNDADEDI----HRHYVATICLQVLHCRPQAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G         ++   +++      I   R    +  S + IR+ + +   + A  +    
Sbjct: 127 G--------FVKVLAQRFAQPVKHIRLQRPVGDEAPSGTLIRSDVHRYRYMLAYDVYRSF 178

Query: 190 FTIES 194
                
Sbjct: 179 VHRIC 183


>gi|253991021|ref|YP_003042377.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782471|emb|CAQ85635.1| bifunctional protein HldE [Photorhabdus asymbiotica]
          Length = 474

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 41/184 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F   +         +  V+  G FD +H GH   LE A K+ +   + V        
Sbjct: 323 MTEFQLKQAVADARQRGEKIVMTNGCFDILHAGHVSYLENARKLGDRLIVAV-------- 374

Query: 61  TIIQSSSPIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVL 112
               S +    L       +P   +  +L  +G    ++   F  +    +  + I  VL
Sbjct: 375 ---NSDASTKRLKGESRPVNPLEQRMIVLSALGAVDWVV--PFEED----TPRRLIADVL 425

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            +      ++ G  ++  ++ AG   +        G     +     N    +S++NI  
Sbjct: 426 PD-----VLVKGGDYK-PEEIAGSEEVWAA-----GGEVKVL-----NFEDGISTTNIIK 469

Query: 173 ALTK 176
           A+ K
Sbjct: 470 AIKK 473


>gi|218551366|ref|YP_002385158.1| transcriptional regulator [Escherichia fergusonii ATCC 35469]
 gi|218358908|emb|CAQ91567.1| putative transcriptional regulator [Escherichia fergusonii ATCC
           35469]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE-- 79
           + +G F  +H GH  ++  A+       I   S    P        P   LS   ++   
Sbjct: 16  LVVGKFAPLHCGHERLINTALAQCEELYIISYSVPEMP-----GCEPEKRLSWLQLRFPR 70

Query: 80  --------KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
                   +++     +A+       +        ++  + ++ L  +   V T   +  
Sbjct: 71  ANILVLTPELVASYNLTAIPPNDADEDI----HRHYVATICLQVLHCRPQAVFTAEDYGD 126

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G         ++   +++      I   R    +  S + IR+ + +   + A  +    
Sbjct: 127 G--------FVKVLAQRFAQPVKHIRLQRPVGDEAPSGTLIRSDVHRYRYMLAYDVYRSF 178

Query: 190 FTIES 194
                
Sbjct: 179 VHRIC 183


>gi|257468020|ref|ZP_05632116.1| citC, [citrate (pro-3S)-lyase] ligase [Fusobacterium ulcerans ATCC
           49185]
 gi|317062306|ref|ZP_07926791.1| citrate lyase synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313687982|gb|EFS24817.1| citrate lyase synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 31/168 (18%)

Query: 33  GHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS---PIFTLSPPSIQ----------- 78
           GH  ++E+A          VL F      ++Q      P  T      +           
Sbjct: 157 GHQFLIEKAASENEE----VLIF------VVQEDKSVFPFKTRYNLVKKGTAHLGNVKVI 206

Query: 79  ---EKILEKMGFSALIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDR 133
              E I+    F      K       Y+        K   E L +     G +      +
Sbjct: 207 PGTEYIISSATFPNYFLRKEDDSLMEYTKLDATIAGKQFGEKLNINRRYIGEEPYCPVTK 266

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             +   L +   +YG   V +   +      +S+S +R  L +G +  
Sbjct: 267 KYN-DALMEILPEYGMEVVLVPR-KELHHTAISASIVREKLKEGKIEE 312


>gi|269793265|ref|YP_003318169.1| citrate lyase ligase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100900|gb|ACZ19887.1| citrate lyase ligase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 347

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 39/199 (19%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI----LEKMG- 86
            GH  + E+A   + +  + V+          +S    F   P   + ++    LE +G 
Sbjct: 158 RGHRYLAERASSASEHLFVVVV----------RSDRSSF---PFEDRIRMVRLGLEDLGN 204

Query: 87  ---FS----ALIRYKFTLETANYSA------------EQFIQKVLVEWLEVKTVITGTKF 127
                    A+    F        +                 ++ V  L +++   GT+ 
Sbjct: 205 VTVVDGGDYAVSSATFPTYFLRDPSMEEVIRIQTRLDLDLFGRIFVPALRIRSRFVGTEP 264

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
                   ++ + ++   ++G   V +  L       VS+S +R A+ +G       LL 
Sbjct: 265 YCPVTGLYNQAM-REVLPRFGVQVVEVPRL-EEGGSAVSASLVRRAMAEGDPRGLEALLP 322

Query: 188 YRFTIESDVIHGEKIGRTL 206
                           R L
Sbjct: 323 PTSYRYIMDNWDRLRERVL 341


>gi|238897434|ref|YP_002923111.1| glycerol-3-phosphate cytidylyltransferase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465189|gb|ACQ66963.1| glycerol-3-phosphate cytidylyltransferase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 157

 Score = 39.8 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  +L++   + +   I V+S +              +      +++
Sbjct: 5   VITYGTFDLFHVGHIRLLKRLKALGDYL-IVVISTDG-----FNQLKDKKSFFCYEERKE 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+E       ++             E   ++   + +  K  I G     G D  G    
Sbjct: 59  IVESCKYVDLVL------------PENTWEQKRSDIINNKVNILG----IGDDWTGHFDD 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           L    E           +   +++ VS+++I+  L+   +     L
Sbjct: 103 LNDICEV----------IYLKRTENVSTTDIKNKLSVITLQKLREL 138


>gi|289551494|ref|YP_003472398.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315659005|ref|ZP_07911872.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           lugdunensis M23590]
 gi|289181025|gb|ADC88270.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496129|gb|EFU84457.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           lugdunensis M23590]
          Length = 132

 Score = 39.8 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   I  LS +              +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYL-IVALSSDE-----FNQIKHKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I             +   ++  VE  E+ T + G  +       G+   
Sbjct: 58  MLESIRYVDLVIPEN----------DWGQKETDVERYEIDTFVMGHDW------EGEFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+ + E           +   +++ +S++ I+  L    
Sbjct: 102 LKDKCEV----------VYLKRTEGISTTQIKQELYGKD 130


>gi|238924849|ref|YP_002938365.1| putative pantoate--beta-alanine ligase [Eubacterium rectale ATCC
           33656]
 gi|238876524|gb|ACR76231.1| putative pantoate--beta-alanine ligase [Eubacterium rectale ATCC
           33656]
          Length = 308

 Score = 39.8 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M ++  IE  +      K      G V  +G    +H GH  +++ A +  +     V+S
Sbjct: 30  MLIYGQIEQVREAVKAWKKEGKSVGFVPTMGY---LHEGHKSLIDAARRENDK---VVVS 83

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +          +   K+ E  G   +    F  E     A+ F   V + 
Sbjct: 84  IFVNPMQFGPAEDLDSYPRDLNRDAKLCEDAGVDII----FHPEPEEMYADGFCSYVDMN 139

Query: 115 W---------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
                                 L++  ++T  +  FG+  A    ++++  +     T  
Sbjct: 140 GLTTELCGKTRPIHFRGVQTVVLKLFHIVTPDRAYFGQKDAQQLAVIKRMVKDLNVDTEI 199

Query: 154 I--DELRNNKSQIVSS 167
           I    +R       SS
Sbjct: 200 IGCPIIREEDGLAKSS 215


>gi|317008686|gb|ADU79266.1| pantoate--beta-alanine ligase [Helicobacter pylori India7]
          Length = 276

 Score = 39.8 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALRECRKGLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +P     +        P      + E +G +A+   K   E   Y AEQ ++    ++L
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEGLGVNAVFAPKMN-EMYPYEAEQRLKLHAPKFL 112


>gi|225165956|ref|ZP_03727715.1| ADP-heptose synthase bifunctional sugar
           kinase/adenylyltransferase-like protein [Opitutaceae
           bacterium TAV2]
 gi|224799798|gb|EEG18268.1| ADP-heptose synthase bifunctional sugar
           kinase/adenylyltransferase-like protein [Opitutaceae
           bacterium TAV2]
          Length = 375

 Score = 39.8 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +E  + L    +  V+  G FD +H GH   L+++ ++ +   I V S +   R +    
Sbjct: 209 VERRRRLAAEGRRLVLTNGVFDLLHRGHLEYLQKSAQLGDELWIAVNS-DDSVRRLKGPD 267

Query: 67  SPIFTLSPPSIQEKILEKM-GFSALIRYK 94
            P   L+    +   L  +    A+  + 
Sbjct: 268 RP---LNNEHDRAFALASLRSVDAVFIFP 293


>gi|325499634|gb|EGC97493.1| transcriptional regulator [Escherichia fergusonii ECD227]
          Length = 336

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE-- 79
           + +G F  +H GH  ++  A+       I   S    P        P   LS   ++   
Sbjct: 8   LVVGKFAPLHCGHERLINTALAQCEELYIISYSVPEMP-----GCEPEKRLSWLQLRFPR 62

Query: 80  --------KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
                   +++     +A+       +        ++  + ++ L  +   V T   +  
Sbjct: 63  ANILVLTPELVASYNLTAIPPNDADEDI----HRHYVATICLQVLHCRPQAVFTAEDYGD 118

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G         ++   +++      I   R    +  S + IR+ + +   + A  +    
Sbjct: 119 G--------FVKVLAQRFAQPVKHIRLQRPVGDEAPSGTLIRSDVHRYRYMLAYDVYRSF 170

Query: 190 FTIES 194
                
Sbjct: 171 VHRIC 175


>gi|325860261|ref|ZP_08173385.1| putative glycerol-3-phosphate cytidylyltransferase [Prevotella
           denticola CRIS 18C-A]
 gi|325482227|gb|EGC85236.1| putative glycerol-3-phosphate cytidylyltransferase [Prevotella
           denticola CRIS 18C-A]
          Length = 298

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 64/177 (36%), Gaps = 47/177 (26%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---FNP 57
           M + +N  +N          V+  G +D +H GH  +L++A  + +   + V +   F+ 
Sbjct: 1   MEIHYNTRLNM-------KKVITYGTYDLLHQGHINLLKRAKSLGDYLIVGV-TNDNFD- 51

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV--LVEW 115
                 +    +   S    + + + K G +  I             E ++ +    ++ 
Sbjct: 52  ------RERGKLNVKSNVLERVEAVRKTGLADKIII-----------EDYVGQKIDDIQK 94

Query: 116 LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             V     G+ ++      G    L++         V++      +++ +SS+ +R 
Sbjct: 95  YNVDIFTVGSDWK------GHFDYLKEFC-----DVVYLP-----RTEGISSTMLRK 135


>gi|170681619|ref|YP_001742362.1| cytidyltransferase-like protein [Escherichia coli SMS-3-5]
 gi|170519337|gb|ACB17515.1| cytidyltransferase-related domain protein [Escherichia coli
           SMS-3-5]
          Length = 131

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +         P   +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--PQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYSADILVMGDDW 96


>gi|119503387|ref|ZP_01625471.1| putative kinase [marine gamma proteobacterium HTCC2080]
 gi|119461033|gb|EAW42124.1| putative kinase [marine gamma proteobacterium HTCC2080]
          Length = 475

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 40/109 (36%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH   L +A  + +   + V        ++     P   ++P   + +
Sbjct: 345 IMTNGCFDILHRGHIDYLSRARALGHRLIVAV----NDDASVAALKGPTRPVNPLEARME 400

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     ++        ++ +    I  +  +      ++ G  +R
Sbjct: 401 LLAALRCVDWVV------SFSSETPADLITAIAPD-----VLVKGGDYR 438


>gi|92115181|ref|YP_575109.1| pantothenate synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122419140|sp|Q1QSZ8|PANC_CHRSD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|91798271|gb|ABE60410.1| pantothenate synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 283

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 51/196 (26%), Gaps = 37/196 (18%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  +++ A     ++ + V +   +P     +              + L
Sbjct: 29  TMGN---LHAGHLALVDAAR---RDADVVVATIFVNPLQFGANEDFASYPRTLEADAQAL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
              G   +    FT  T             V   +V   + G                  
Sbjct: 83  ASHGCDLV----FTPRTDALYPHGLEAHTQVSVPDVSEGLCGANRPGHFTGVATVVSLLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K      F    V +   R      +SS N    L+  
Sbjct: 139 NLVQPDAAYFGRKDYQQFMVIRKLVADLHFPIEIVGVPTQRAEDGLALSSRN--GYLSAA 196

Query: 178 HVLNAAHLLGYRFTIE 193
               A  L      + 
Sbjct: 197 ERQRAPALYRTLCQVH 212


>gi|116668929|ref|YP_829862.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase
           [Arthrobacter sp. FB24]
 gi|116609038|gb|ABK01762.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase
           [Arthrobacter sp. FB24]
          Length = 516

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H GH   L QA ++ +   + + + +   R +     P   ++  + 
Sbjct: 371 RRIVLTNGCFDVLHRGHTRYLNQAKQLGDILVVALNT-DESVRQLKGPDRP---INSVAD 426

Query: 78  QEKILEKMG-FSALIRYK 94
           +  ++  +     +  + 
Sbjct: 427 RAAVIAALSCVDYVTVFD 444


>gi|196228170|ref|ZP_03127037.1| cytidyltransferase-related domain protein [Chthoniobacter flavus
           Ellin428]
 gi|196227573|gb|EDY22076.1| cytidyltransferase-related domain protein [Chthoniobacter flavus
           Ellin428]
          Length = 158

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 25/154 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H+GH   L+ A  + +   +  ++ +   R +   + P   ++    
Sbjct: 23  RRLVFTNGCFDLLHVGHVRYLQAARALGDAL-LVAVNGDVSVRALKGPTRP---INNEQD 78

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + ++L  +G    L  +                  LV  +  +    G  +      AG+
Sbjct: 79  RAEVLGALGCVDYLTIFHTDR-----------VTDLVRAIRPQVYAKGGDYTVASLDAGE 127

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           R  L+  G +     + I  L   K    S++NI
Sbjct: 128 RDALEAVGAE-----IQILPLVPGK----STTNI 152


>gi|11499788|ref|NP_071031.1| phosphopantetheine adenylyltransferase [Archaeoglobus fulgidus DSM
           4304]
 gi|31563010|sp|O28077|COAD_ARCFU RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|197725277|pdb|3DO8|A Chain A, The Crystal Structure Of The Protein With Unknown Function
           From Archaeoglobus Fulgidus
 gi|197725278|pdb|3DO8|B Chain B, The Crystal Structure Of The Protein With Unknown Function
           From Archaeoglobus Fulgidus
 gi|2648319|gb|AAB89047.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 148

 Score = 39.8 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 17/152 (11%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VA+G  F+ +H GH  +++ AIK+        ++ +   R  I+S  P F +   +++  
Sbjct: 3   VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVLP-FAIRAENVKRY 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++ K G        F  E    +   + + + V++   + ++   +     + A      
Sbjct: 62  VMRKYG--------FEPEIVKIT-NPYGKTLDVDF---EYLVVSPET---YEMALKINQK 106

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           ++   K     V +D +     + +SS+ I+ 
Sbjct: 107 REELGKRKITIVKVDWMMAEDGKPISSTRIKR 138


>gi|157376088|ref|YP_001474688.1| glycerol-3-phosphate cytidylyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|157318462|gb|ABV37560.1| Glycerol-3-phosphate cytidylyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 131

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/158 (10%), Positives = 52/158 (32%), Gaps = 31/158 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             ++  G FD  H GH  + ++   + +   + V +          +            +
Sbjct: 2   KTIITYGTFDLFHFGHVRLFQRLKSLGDRLIVGVSTDE------FNAQKGKAAFFNYQQR 55

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +I+    +  L+  +              ++  ++ L++     G  +       G   
Sbjct: 56  VEIIAACRYVDLVIPEMN---------WQQKQHDIKRLKIDVFGMGNDW------EGKFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            L  + +           +  +++  +S++ I+++L+ 
Sbjct: 101 SLSSQCQV----------IYLDRTGNISTTEIKSSLSD 128


>gi|110644391|ref|YP_672121.1| hypothetical protein ECP_4272 [Escherichia coli 536]
 gi|191171955|ref|ZP_03033500.1| NadR transcriptional repressor [Escherichia coli F11]
 gi|300980474|ref|ZP_07175021.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 200-1]
 gi|110345983|gb|ABG72220.1| hypothetical protein ECP_4272 [Escherichia coli 536]
 gi|190907720|gb|EDV67314.1| NadR transcriptional repressor [Escherichia coli F11]
 gi|300307776|gb|EFJ62296.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 200-1]
 gi|324014854|gb|EGB84073.1| putative nicotinamide-nucleotide adenylyltransferase [Escherichia
           coli MS 60-1]
          Length = 334

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 55/185 (29%), Gaps = 29/185 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP----------RTIIQSSSPIFT 71
           + +G F  +H GH  ++  A+       I   S    P            +    + +  
Sbjct: 8   LVVGKFAPLHCGHERLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRFPRATVLV 67

Query: 72  LSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRF 129
           L+P     +++ +    A+       +        ++  + ++ L  +   V T   +  
Sbjct: 68  LTP-----ELIARYNLPAIPHNDADADI----HRHYVATLCLQVLRCRPHAVFTAEDYGD 118

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYR 189
           G          +   +++      I   R    +  S + IR+ +     + A  +    
Sbjct: 119 G--------FAKVLTKRFAQPVEHIRLQRPRGDKSPSGTLIRSDVHHYRYMLAHDVYRSF 170

Query: 190 FTIES 194
                
Sbjct: 171 VRRIC 175


>gi|47093601|ref|ZP_00231359.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|254933477|ref|ZP_05266836.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|47018025|gb|EAL08800.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|293585041|gb|EFF97073.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|328472695|gb|EGF43553.1| hypothetical protein LM220_03582 [Listeria monocytogenes 220]
 gi|332312498|gb|EGJ25593.1| Putative nucleotidyltransferase [Listeria monocytogenes str. Scott
           A]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--ILPKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + V T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTLAAKK 116


>gi|268317408|ref|YP_003291127.1| sulfate adenylyltransferase [Rhodothermus marinus DSM 4252]
 gi|262334942|gb|ACY48739.1| sulfate adenylyltransferase [Rhodothermus marinus DSM 4252]
          Length = 578

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 34/176 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  + ++A +      +       HP   +     I   +      K+L+    G 
Sbjct: 203 MHRAHKELTDRAAEEVGGHLLI------HPVVGMTKPGDIDYYTRVRCYRKLLKYYPEGR 256

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAGDR--------G 138
           + L      +       E     ++ +      +I G      GKD +G           
Sbjct: 257 AMLSLLPLAMRMGG-PREAVWHAIIRKNYGCTHLIIGRDHAGPGKDSSGRPFYGPYDAQE 315

Query: 139 ILQKRGEKYGFHTV---------------FIDELRNNKSQ-IVSSSNIRTALTKGH 178
           ++QK  ++ G   V                IDE++  +    +S + +R  L +G 
Sbjct: 316 LVQKYQDELGIGVVPFKLMVYVPDQDTYKPIDEVKEGERTLSISGTELRRRLAEGE 371


>gi|254826196|ref|ZP_05231197.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254854015|ref|ZP_05243363.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300765484|ref|ZP_07075465.1| hypothetical protein LMHG_12354 [Listeria monocytogenes FSL N1-017]
 gi|258607404|gb|EEW20012.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293595435|gb|EFG03196.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513795|gb|EFK40861.1| hypothetical protein LMHG_12354 [Listeria monocytogenes FSL N1-017]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--ILPKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + V T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTLAAKK 116


>gi|291527251|emb|CBK92837.1| pantothenate synthetase [Eubacterium rectale M104/1]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 33/172 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +++ A +  +     V+S   +P     +          +  
Sbjct: 25  GFVPTMGY---LHEGHKSLIDAARRENDK---VVVSIFVNPMQFGPAEDLDSYPRDLNRD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW---------------------LE 117
            K+ E  G   +    F  E     A+ F   V +                       L+
Sbjct: 79  AKLCEDAGVDII----FHPEPEEMYADGFCSYVDMNGLTTELCGKTRPIHFRGVQTVVLK 134

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
           +  ++T  +  FG+  A    ++++  +     T  I    +R       SS
Sbjct: 135 LFHIVTPDRAYFGQKDAQQLAVIKRMVKDLNVDTEIIGCPIIREEDGLAKSS 186


>gi|270297011|ref|ZP_06203210.1| glycerol-3-phosphate cytidyltransferase [Bacteroides sp. D20]
 gi|270272998|gb|EFA18861.1| glycerol-3-phosphate cytidyltransferase [Bacteroides sp. D20]
          Length = 446

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 86/270 (31%), Gaps = 60/270 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D  H GH+ +L++A  + +   + V +  F+      ++    + T +    +
Sbjct: 4   VITYGTYDLFHQGHYNLLKRAKALGDYLIVGVTTDSFD------LERGK-MNTCNNVMER 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            + ++  G +  I      E      +       ++   V     G+ +       G   
Sbjct: 57  IEAVKSTGLADQIVI---EEYRGQKIDD------IQKYGVDIFAIGSDW------EGYFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT-------------ALTKGHVLNAAHL 185
            L +  +      +++      ++Q +SS+ +R              ++    V  + ++
Sbjct: 102 YLNEFCK-----VIYLP-----RTQGISSTLLRQKYPIVNIGIIGTGSIASRFVPESKNV 151

Query: 186 LGYRFTIESDVIHGEKIGRTLGF--PTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVAN 243
                ++  +    E +     F  P     L       + VY                N
Sbjct: 152 NSASVSVAYNPNQEECVSFCEKFLIPIVARDLEELYENCDAVYIASPHYTHYEYAKSALN 211

Query: 244 FGRNPTMVPNGPLLLE---SFIFDFSQEIY 270
            G         P+L E    F    ++E+Y
Sbjct: 212 AG--------KPVLCETPFVFSKKQAEELY 233


>gi|255520506|ref|ZP_05387743.1| hypothetical protein LmonocFSL_04616 [Listeria monocytogenes FSL
           J1-175]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--ILPKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + V T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTLAAKK 116


>gi|170021369|ref|YP_001726323.1| cytidyltransferase-like protein [Escherichia coli ATCC 8739]
 gi|169756297|gb|ACA78996.1| cytidyltransferase-related domain protein [Escherichia coli ATCC
           8739]
          Length = 131

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +             +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARALGERLLVGV---SSDALNIAKKGRAPVY--HQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E     AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEELLEQKAE------YLRGYSADILVMGDDW 96


>gi|289434346|ref|YP_003464218.1| glycerol-3-phosphate cytidylyltransferase [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289170590|emb|CBH27130.1| glycerol-3-phosphate cytidylyltransferase [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313633859|gb|EFS00580.1| glycerol-3-phosphate cytidylyltransferase [Listeria seeligeri FSL
           N1-067]
          Length = 127

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   +  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-VVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+E +     +I           + EQ I+   ++   +   + G  +       G+   
Sbjct: 58  IIEAIRYVDEVIPEH--------NWEQKIED--IKKHNIDVFVMGDDW------EGEFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L++         V++      +++ +S+S I+  L
Sbjct: 102 LKELC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|195970726|gb|ACG60764.1| NTP-sugar synthase [Streptomyces flavoviridis]
          Length = 497

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 16/114 (14%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
             +  V   G +D +H GH   L +A ++ +   + V S +   R +     P   L+P 
Sbjct: 348 PYRRLVFTNGCYDILHAGHVSNLSRAKELGDLLVVGVNS-DDSVRRLKGPGRP---LTPL 403

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             + +IL  +    A++           S    +     E L     + G+ + 
Sbjct: 404 DERMRILAALSCVDAVVP------FRGDSPVDLL-----EALRPDVYVKGSDYT 446


>gi|91205703|ref|YP_538058.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia bellii
           RML369-C]
 gi|157826838|ref|YP_001495902.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia bellii OSU
           85-389]
 gi|91069247|gb|ABE04969.1| Glycerol-3-phosphate cytidyltransferase TagD [Rickettsia bellii
           RML369-C]
 gi|157802142|gb|ABV78865.1| Glycerol-3-phosphate cytidyltransferase TagD [Rickettsia bellii OSU
           85-389]
          Length = 184

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 22/172 (12%)

Query: 1   MHVFHNIEINQS-LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           +  + NI  N+  LPN     V+  G FD +H GH   LE   +        +++  P  
Sbjct: 29  IEYYENISSNKKCLPNS--KIVLVGGCFDVLHYGH---LEFLHEAKKQGKYLIIALEPDE 83

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             I         +     + KIL  +     ++         +Y        +LV+ +  
Sbjct: 84  TIIKYKKRKP--IHNQMQRAKILSSLTFVDKVLMLPELKGFNDY-------ALLVQNICP 134

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             +           +  ++    K           ID +++      S+SNI
Sbjct: 135 SVIAVTKHDP----QLANKQTQAKLINAQVIEV--IDLIQHPDIGTFSTSNI 180


>gi|54307662|ref|YP_128682.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Photobacterium profundum SS9]
 gi|54035976|sp|Q6LUZ5|HLDE_PHOPR RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|46912085|emb|CAG18880.1| putative ADP-heptose synthase [Photobacterium profundum SS9]
          Length = 476

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V        ++     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLAEAAKLGDRLIVAV----NSDSSVQGLKGPGRPVNPEDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   FT E    + ++ I ++L        ++ G  ++
Sbjct: 399 VLAGLGAVDWVV--PFTEE----TPQRLISEIL-----PSLLVKGGDYK 436


>gi|329940668|ref|ZP_08289949.1| bifunctional synthase/transferase [Streptomyces griseoaurantiacus
           M045]
 gi|329300729|gb|EGG44626.1| bifunctional synthase/transferase [Streptomyces griseoaurantiacus
           M045]
          Length = 491

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 17/113 (15%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +L+ A +I +   + V        ++ +       ++P +
Sbjct: 344 GGTVVAAGGCFDLLHAGHVGLLQAARRIGDCLVVCV----NSDASVRRRKGEGRPVNPLA 399

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            + ++L  +    A+    F  +    + E  +       LE    + G  + 
Sbjct: 400 DRIRVLRALECVDAVAV--FDED----TPEALLT-----RLEPDVWVKGGDYT 441


>gi|255557903|ref|XP_002519980.1| Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus
           communis]
 gi|223540744|gb|EEF42304.1| Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus
           communis]
          Length = 418

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 31/160 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P    +P   +  ++  
Sbjct: 61  GCFDMMHYGHCNALRQARALGDELVVGVVSD----AEIIANKGPPV--TPLHERMIMVNA 114

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E      E++          +  +I G       D      + 
Sbjct: 115 VKWVDEVIPDAPYAITEEFMKKLFEEY---------NIDYIIHGDDPCVLPDGTDAYALA 165

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +K G                +++ VSS++I  R  L    
Sbjct: 166 KKAGRYKQIK----------RTEGVSSTDIVGRMLLCTRE 195


>gi|47097280|ref|ZP_00234839.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|254827063|ref|ZP_05231750.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254899253|ref|ZP_05259177.1| hypothetical protein LmonJ_05554 [Listeria monocytogenes J0161]
 gi|254912607|ref|ZP_05262619.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936933|ref|ZP_05268630.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|47014353|gb|EAL05327.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258599445|gb|EEW12770.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609535|gb|EEW22143.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293590600|gb|EFF98934.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTLAAKK 116


>gi|46200717|ref|ZP_00207812.1| COG2870: ADP-heptose synthase, bifunctional sugar
           kinase/adenylyltransferase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 519

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 24/173 (13%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           EI +      +  V+  G FD +H+GH   LE A +      +T L+ +        +  
Sbjct: 25  EIVREAREAGEQVVLCHGVFDLLHMGHVRHLEAARREGTKLCVT-LTGDR-----FVNKG 78

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P  ++ ++L        +                   + +++ +     + G+ 
Sbjct: 79  PGRPIFPEGLRAEMLAACQYVDWVAVNH-----------APTAENVLDTVRPSVYVKGSD 127

Query: 127 F-RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +    +D  G     +   EK+G   VF  ++        SS+ I   L    
Sbjct: 128 YENPEEDITGKIRAEKDAVEKHGGKLVFTKDIT-----FSSSTLINRYLDVYD 175


>gi|291526015|emb|CBK91602.1| pantothenate synthetase [Eubacterium rectale DSM 17629]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 33/172 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +++ A +  +     V+S   +P     +          +  
Sbjct: 25  GFVPTMGY---LHEGHKSLIDAARRENDK---VVVSIFVNPMQFGPAEDLDSYPRDLNRD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW---------------------LE 117
            K+ E  G   +    F  E     A+ F   V +                       L+
Sbjct: 79  AKLCEDAGVDII----FHPEPEEMYADGFCSYVDMNGLTTELCGKTRPIHFRGVQTVVLK 134

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
           +  ++T  +  FG+  A    ++++  +     T  I    +R       SS
Sbjct: 135 LFHIVTPDRAYFGQKDAQQLAVIKRMVKDLNVDTEIIGCPIIREEDGLAKSS 186


>gi|48428736|gb|AAT42385.1| ADP-heptose synthase [Collimonas fungivorans Ter331]
          Length = 159

 Score = 39.8 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+   +    +  V+  G FD +H GH   L QA +      + V + +   + + +   
Sbjct: 13  ELKSRVAALPQPVVLTNGVFDILHRGHVTYLAQAREQGAALVVAVNT-DASVKRLGKGDD 71

Query: 68  PIFTLSPPSIQEKILEKMGFSAL-IRYKFTLETA 100
               ++  + +  +L  +   A+ +  +F  +TA
Sbjct: 72  RP--INTCADRMAVLAAL--EAVSLVVEFDEDTA 101


>gi|237749227|ref|ZP_04579707.1| ADP-heptose synthase [Oxalobacter formigenes OXCC13]
 gi|229380589|gb|EEO30680.1| ADP-heptose synthase [Oxalobacter formigenes OXCC13]
          Length = 158

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            +++  ++   + +  K  V+  G FD +H GH   L QA ++  +  + V + +   + 
Sbjct: 7   KIWNRSDLKSKIGSLPKPVVLTNGVFDILHRGHVTYLAQARELGASLIVAVNT-DASVKR 65

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETAN 101
           + +        +    +  +L  +   SA++   F  +TA 
Sbjct: 66  LGKGDDRPV--NSCEDRMAVLAALESVSAVVA--FDEDTAQ 102


>gi|254831710|ref|ZP_05236365.1| hypothetical protein Lmon1_10163 [Listeria monocytogenes 10403S]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTLAAKK 116


>gi|238786770|ref|ZP_04630571.1| Pantothenate synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238725138|gb|EEQ16777.1| Pantothenate synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 284

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHQGHMTLVEDAKMRAD---VVVVSIFVNPLQFERPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+        +  V+   + T++ G                  
Sbjct: 83  TRHGVDLV----FAPAAADVYPAGLEAQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
                    FG+       +++K     G+    + +  +R      +SS
Sbjct: 139 NLVQPNVACFGEKDYQQLALIRKMVADMGYDINVIGVPIVRAKDGLALSS 188


>gi|318079717|ref|ZP_07987049.1| pantoate--beta-alanine ligase [Streptomyces sp. SA3_actF]
          Length = 336

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 25/193 (12%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P   +  V+ +G    +H GH  ++ +A  +A      V++   +P              
Sbjct: 51  PAGRRALVMTMG---ALHEGHASLVREARALAGPEGQVVVTVFVNPLQFGAGEDLDRYPR 107

Query: 74  PPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKVLV----EWLEVKTVIT 123
                  I    G   ++       Y         SA    +++         +    + 
Sbjct: 108 SLEADLDIAGSAGADHVLAPSVDEVYPGGAPEVRISAGPMGERLEGASRPGHFDGMLTVV 167

Query: 124 GTKFR--------FGKDRAGDRGILQKRGE--KYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           G  F         FG+  A    ++++      +G   V +   R +     SS N    
Sbjct: 168 GKMFHLVRPDLALFGQKDAQQLALVRRMVRDLAFGIEIVSVPTARESDGLARSSRN--RY 225

Query: 174 LTKGHVLNAAHLL 186
           L++    +A  L 
Sbjct: 226 LSEDERRSALALS 238


>gi|284802494|ref|YP_003414359.1| hypothetical protein LM5578_2250 [Listeria monocytogenes 08-5578]
 gi|284995636|ref|YP_003417404.1| hypothetical protein LM5923_2201 [Listeria monocytogenes 08-5923]
 gi|284058056|gb|ADB68997.1| hypothetical protein LM5578_2250 [Listeria monocytogenes 08-5578]
 gi|284061103|gb|ADB72042.1| hypothetical protein LM5923_2201 [Listeria monocytogenes 08-5923]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTLAAKK 116


>gi|269138044|ref|YP_003294744.1| pantoate--beta-alanine ligase [Edwardsiella tarda EIB202]
 gi|267983704|gb|ACY83533.1| pantoate--beta-alanine ligase [Edwardsiella tarda EIB202]
 gi|304558088|gb|ADM40752.1| Pantoate--beta-alanine ligase [Edwardsiella tarda FL6-60]
          Length = 286

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 37/214 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++ +A   A+   + ++S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVNEARARAD---VVIVSVFVNPMQFDRPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------------------ 124
            + G   +    F         +   Q+  V+   + T++ G                  
Sbjct: 83  NRHGVDLV----FAPAAEEIYPQGVSQQTYVDVPALSTILEGASRPGHFRGVATIVSKLF 138

Query: 125 -----TKFRFGKDRAGDRGILQKRGEK--YGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K      YG   V +  +R      +SS N    L   
Sbjct: 139 NLVQPDLACFGEKDYQQLQLIRKLVADMGYGIEIVGVPIVRGEDGLALSSRN--GYLDSD 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
               A  L      + S + +GE+    L   TA
Sbjct: 197 ERRLAPRLYNIMMQLASQLENGERDLEALLEQTA 230


>gi|315283092|ref|ZP_07871359.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
 gi|313613266|gb|EFR87143.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
          Length = 414

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A +  N +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 37  FHNGHKLHLNKARESTNADVVIAVMS-----GSFVQRGEPA--ILPKWERTKMALAAGVD 89

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            ++     F  + A   AE+ ++ +  + L V ++  G++ 
Sbjct: 90  MVVELPVSFATQHATIFAEESVRIL--DALHVDSLFFGSEH 128


>gi|241661793|ref|YP_002980153.1| bifunctional protein RfaE [Ralstonia pickettii 12D]
 gi|240863820|gb|ACS61481.1| rfaE bifunctional protein [Ralstonia pickettii 12D]
          Length = 178

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 8/95 (8%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  +  +  + V + +   R + +       L+    
Sbjct: 42  RPLVFTNGVFDILHRGHATYLAQARALGASLVVGVNT-DASVRMLGKGDDRP--LNTQDD 98

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           +  +L  +   +L+        A  +  + IQ+V 
Sbjct: 99  RLAVLAALEAVSLVVL-----FAERTPVELIQRVR 128


>gi|224418453|ref|ZP_03656459.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|253827769|ref|ZP_04870654.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|313141985|ref|ZP_07804178.1| nicotinate nucleotide adenylyltransferase [Helicobacter canadensis
           MIT 98-5491]
 gi|253511175|gb|EES89834.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|313131016|gb|EFR48633.1| nicotinate nucleotide adenylyltransferase [Helicobacter canadensis
           MIT 98-5491]
          Length = 200

 Score = 39.8 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 64/207 (30%), Gaps = 39/207 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQE--KI 81
           G+FD  HLGH  I++          + ++ +F       +         SP    E  KI
Sbjct: 9   GSFDPPHLGHLKIIQTIFNSLEVERLFIVPTF-------LNPFKSHSLFSPQKRLEWIKI 61

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRFGKDRAGDRGI 139
           L +   S +    F ++    +        + +  + K   +I G           +   
Sbjct: 62  LTQDLASPITLLDFEIQQNKPTPTYETINFIQQTYKPKKIYLIIGAD---------NLEN 112

Query: 140 LQKRGE----KYGFHTVFIDELRNN----------KSQIVSSSNIRTALTKGHVLNAAHL 185
           L K       K     V I  L             +   +SS+ IR +L K        +
Sbjct: 113 LPKWHHYEKLKNQVEFVIIPRLHYKIDSDFKTLPMQPISISSTQIRDSLQKRDF----KI 168

Query: 186 LGYRFTIESDVIHGEKIGRTLGFPTAN 212
           L       +  I  E   + +  P +N
Sbjct: 169 LESIPKAITQDILKEFNCKKIDNPLSN 195


>gi|146305632|ref|YP_001186097.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas mendocina ymp]
 gi|167017175|sp|A4XPU9|HLDE_PSEMY RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|145573833|gb|ABP83365.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Pseudomonas mendocina
           ymp]
          Length = 473

 Score = 39.8 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   I  ++ +     +     P  
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRL-IVAINDDASVSRLKGPGRP-- 388

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +     + ++   ++ G  +  
Sbjct: 389 -INAVDRRMAVLAGLGAVDWVV------SFAEDTPERLL-----KQVQPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G D+     I+Q     YG     +  + N+     S++ I   +   
Sbjct: 435 GIDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKIRNK 473


>gi|303328605|ref|ZP_07359028.1| RfaE bifunctional protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861284|gb|EFL84235.1| RfaE bifunctional protein [Desulfovibrio sp. 3_1_syn3]
          Length = 246

 Score = 39.8 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 28/115 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           V   G FD +H GH  ++ Q   +        NS  +V       R +     PI     
Sbjct: 113 VFTNGCFDLLHPGHISLIRQCAALGERLVVGLNSDASV-------RRLKGPGRPIQ---N 162

Query: 75  PSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              +  +L  + G  A++   F  +    +  + I++V  + L     + G+ + 
Sbjct: 163 EQSRALLLAALQGVDAVVL--FDED----TPLELIRRVRPDML-----VKGSDYT 206


>gi|221636191|ref|YP_002524067.1| pantoate--beta-alanine ligase [Thermomicrobium roseum DSM 5159]
 gi|221158184|gb|ACM07302.1| pantoate--beta-alanine ligase [Thermomicrobium roseum DSM 5159]
          Length = 282

 Score = 39.8 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 14/117 (11%)

Query: 1   MHVFHNI---EINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           MH+F  I    I +S       G V  +G    +H GH  ++ +A          V+S  
Sbjct: 1   MHLFRTIAELRIWRSQQASRSVGFVPTMGY---LHEGHLALVRRARAENE---TVVVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
            +P                     +LE+ G  A+    F    +      F   V+V
Sbjct: 55  VNPLQFGPQEDYDRYPRDLDRDLYLLEREGVDAV----FAPSVSEMYPSGFSTAVVV 107


>gi|111225711|ref|YP_716505.1| pantoate--beta-alanine ligase [Frankia alni ACN14a]
 gi|123337960|sp|Q0RC35|PANC3_FRAAA RecName: Full=Pantothenate synthetase 3; Short=PS 3; AltName:
           Full=Pantoate--beta-alanine ligase 3; AltName:
           Full=Pantoate-activating enzyme 3
 gi|111153243|emb|CAJ64994.1| Pantoate-beta-alanine ligase (Pantothenate synthetase) (Pantoate
           activating enzyme) [Frankia alni ACN14a]
          Length = 294

 Score = 39.8 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 20/144 (13%)

Query: 2   HVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
            V H IE  +      +      G V+ +G    +H GH  +++ A +  +     VL+ 
Sbjct: 3   RVLHTIEDVREQTREWRAAGSSIGCVMTMG---ALHEGHLSLVDAARRECDK---VVLTL 56

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     S              + L      A+    F   T        + +  ++ 
Sbjct: 57  FVNPIQFGPSEDFDRYPRTEEADFRALRDRECDAV----FAPATETIFP---LGERRIDQ 109

Query: 116 LEVKTVITG-TKFRFGKDRAGDRG 138
           +  K V+ G T    G  R G   
Sbjct: 110 VRTKVVVRGLTDVLCGPRRPGHFD 133


>gi|288817958|ref|YP_003432305.1| glycerol-3-phosphate cytidyltransferase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787357|dbj|BAI69104.1| glycerol-3-phosphate cytidyltransferase [Hydrogenobacter
           thermophilus TK-6]
 gi|308751556|gb|ADO45039.1| rfaE bifunctional protein [Hydrogenobacter thermophilus TK-6]
          Length = 157

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 39/178 (21%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPR 60
           + + +      K  V   G FD +H GH   L++A ++ +      NS  +V       R
Sbjct: 9   LRVLKEEREKGKRVVFTNGCFDILHAGHAYYLKKARELGDILVVGLNSDASV-------R 61

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            I     P   + P  ++  +L+ + G   ++ ++        + E+ I+ +     +  
Sbjct: 62  RIKGEKRP---IMPQEMRAYLLDSLKGVDYVVIFEED------TPERLIELI-----KPD 107

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            ++ G+ +   KD  G   +L      YG     I    N     +S+S I   +   
Sbjct: 108 VLVKGSDWDL-KDIVGADMVL-----SYGGKVERISFEFN-----ISTSAIIERIINA 154


>gi|270294267|ref|ZP_06200469.1| pantoate-beta-alanine ligase [Bacteroides sp. D20]
 gi|270275734|gb|EFA21594.1| pantoate-beta-alanine ligase [Bacteroides sp. D20]
          Length = 285

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 70/199 (35%), Gaps = 37/199 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + L+      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIVHTIKDLQAGLSALRAQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETA------ 100
              +P      +  +     P    ++LE+ G           +     T   +      
Sbjct: 58  ---NPTQFNDKNDLVKYPRTPEADCRLLEECGAAFVFAPSVEEMYPEPDTRRFSYAPLDT 114

Query: 101 ----NYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
                +  E F  + +++ +  +    +   +  FG+       I+++   +  +    +
Sbjct: 115 VMEGAFRPEHFNGVCQIVSKLFDA---VQPDRAYFGEKDFQQLAIIREMVCQMKYPLEIV 171

Query: 155 --DELRNNKSQIVSSSNIR 171
               +R      +SS N R
Sbjct: 172 GCPIVREEDGLALSSRNAR 190


>gi|322711388|gb|EFZ02961.1| phosphorylcholine transferase [Metarhizium anisopliae ARSEF 23]
          Length = 420

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 37/177 (20%)

Query: 2   HVFHNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITV-LS--FN 56
            + H     ++ P  +   V   A G FD  HLGH   LEQA K   N+ + V ++    
Sbjct: 123 KLIHPAGGFKTNPPPVGRSVRVYADGVFDLFHLGHMRQLEQAKKAFPNTTLVVGVTGDDE 182

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
            H R          T+     + + +        +I               +I  V  E+
Sbjct: 183 THKR-------KGLTVMSAKERAESVRHCKWVDEVIE-----------DCPWI--VTAEF 222

Query: 116 LEVKTV--ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           L+   +  +      +G D  GD   + +  +  G   V        +++ VS++ I
Sbjct: 223 LQANHLDYVAHDDLPYGAD-EGD--DIYQPIKAAGMFLV------TQRTEGVSTTGI 270


>gi|322694372|gb|EFY86203.1| phosphorylcholine transferase [Metarhizium acridum CQMa 102]
          Length = 429

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 37/177 (20%)

Query: 2   HVFHNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITV-LS--FN 56
            + H     ++ P  +   V   A G FD  HLGH   LEQA K   N+ + V ++    
Sbjct: 122 KLIHPAGGFKTNPPPVGRSVRVYADGVFDLFHLGHMRQLEQAKKAFPNTTLVVGVTGDDE 181

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEW 115
            H R          T+     + + +        +I               +I  V  E+
Sbjct: 182 THKR-------KGLTVMSAKERAESVRHCKWVDEVIE-----------DCPWI--VTAEF 221

Query: 116 LEVKTV--ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
           L+   +  +      +G D  GD   + +  +  G   V        +++ VS++ I
Sbjct: 222 LQANHLDYVAHDDLPYGAD-EGD--DIYQPIKAAGMFLV------TQRTEGVSTTGI 269


>gi|218690097|ref|YP_002398309.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli ED1a]
 gi|218427661|emb|CAR08446.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli ED1a]
          Length = 131

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 22/112 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H+GH  IL++A +  +   + V    L+F         S    + +    
Sbjct: 4   VITFGTFDVFHIGHVNILKRAKEFGDLLIVGVSSDSLNF---------SKKQRYPIYSQE 54

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            + +I+  + F   +  + +L+          +   +   E   ++ G  ++
Sbjct: 55  ERIEIISSLKFVDHVFIEESLDL---------KLEYIRKYEANLLVMGDDWK 97


>gi|168013258|ref|XP_001759318.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689631|gb|EDQ76002.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 422

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 31/160 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P         +  ++  
Sbjct: 61  GCFDMMHYGHANALRQARALGDELVVGVMSDE----EIKANKGPPV--MSMDERVVMVSS 114

Query: 85  MG-FSALIR---YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I+   Y+  +E  N    ++          +  +I G       D +      
Sbjct: 115 VKWVDEVIQDAPYEINVEFMNKLFTEY---------RIDYIIHGDDPCLLPDGSDAYAHA 165

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +K G                +++ VSS++I  R  L    
Sbjct: 166 KKAGRYKQIK----------RTEGVSSTDIVGRMLLCVRD 195


>gi|121612386|ref|YP_001001252.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006144|ref|ZP_02271902.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249695|gb|EAQ72654.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 386

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|295442802|ref|NP_588548.2| cholinephosphate cytidylyltransferase (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|259016333|sp|O74975|PCY1_SCHPO RecName: Full=Probable choline-phosphate cytidylyltransferase;
           AltName: Full=CTP:phosphocholine cytidylyltransferase;
           Short=CCT; Short=CT; AltName: Full=Phosphorylcholine
           transferase
 gi|254745651|emb|CAA19310.3| cholinephosphate cytidylyltransferase (predicted)
           [Schizosaccharomyces pombe]
          Length = 362

 Score = 39.4 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 26/197 (13%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P      V A G FD  H+GH   LEQA K+  N  + V      P   +       T
Sbjct: 95  DPPEGRPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIV----GLPNDQLTHRLKGLT 150

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           +     + + L        ++           + E F+++  +++      +      + 
Sbjct: 151 VMNDKERAEALRHCKWVDEVLE----NAPWVITPE-FLEEHKIDF------VAHDDIPYA 199

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHVLNAAHLLGYR 189
            D +GD  +  K+  K+         +   +++ VS+S  I   +         +L    
Sbjct: 200 SDDSGDIYLPVKKVGKF---------IPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGV 250

Query: 190 FTIESDVIHGEKIGRTL 206
              E +V   +K    L
Sbjct: 251 NRKELNVSLFKKNELDL 267


>gi|226224655|ref|YP_002758762.1| hypothetical protein Lm4b_02070 [Listeria monocytogenes Clip81459]
 gi|259646577|sp|C1KX02|Y2070_LISMC RecName: Full=UPF0348 protein Lm4b_02070
 gi|225877117|emb|CAS05829.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 390

 Score = 39.4 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + ++    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--ILPKWERTRMALAAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + V T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHVDTLFFGSEHGVAEDFTLAAKK 116


>gi|123440946|ref|YP_001008369.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122087907|emb|CAL10695.1| transcriptional regulator NadR [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 427

 Score = 39.4 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P    + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCYDEPRDLELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + + +++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDENGIEPYPHGWDVWSRGVKKFMNEKGIVA--N 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYREQFGIETILIDPERSF--MNISGRQIRR 213


>gi|284048987|ref|YP_003399326.1| rfaE bifunctional protein [Acidaminococcus fermentans DSM 20731]
 gi|283953208|gb|ADB48011.1| rfaE bifunctional protein [Acidaminococcus fermentans DSM 20731]
          Length = 492

 Score = 39.4 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 23/139 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   LEQA ++  +  + V +     R  ++  +    L+  + + +
Sbjct: 359 VFTNGCFDILHTGHVTYLEQASRLGQHLIVGVNTDASVKR--LKGETRP--LNQENDRAR 414

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR----FGKDRAG 135
           +L  +G   A++           +  + I+++  + L     + G  ++     G++ AG
Sbjct: 415 LLAALGCVDAVVL------FGEDTPTELIRRIRPDIL-----VKGGDYKPEEVAGREYAG 463

Query: 136 DRGILQKRGEKYGFHTVFI 154
              IL     K G+ T  +
Sbjct: 464 RVEILPF---KEGYSTTGV 479


>gi|84687582|ref|ZP_01015457.1| pantoate--beta-alanine ligase [Maritimibacter alkaliphilus
          HTCC2654]
 gi|84664372|gb|EAQ10861.1| pantoate--beta-alanine ligase [Rhodobacterales bacterium
          HTCC2654]
          Length = 282

 Score = 39.4 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 12/98 (12%)

Query: 1  MHVFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLS 54
          M +       + L +  +     IG    +      H GH  ++E A    +     +++
Sbjct: 1  MKIVRQKSDLRDLTHTWRRAGETIGV---VPTMGALHAGHLSLVEAAKSRTDR---VIVT 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +PR                   + L       L  
Sbjct: 55 LFVNPRQFNNPEDLAKYPRTEDSDAEKLAPFDVDVLYV 92


>gi|227877768|ref|ZP_03995801.1| possible nucleotidyltransferase [Lactobacillus crispatus JV-V01]
 gi|256843619|ref|ZP_05549107.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256850095|ref|ZP_05555525.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262047383|ref|ZP_06020340.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|293380728|ref|ZP_06626776.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
 gi|227862627|gb|EEJ70113.1| possible nucleotidyltransferase [Lactobacillus crispatus JV-V01]
 gi|256615039|gb|EEU20240.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713067|gb|EEU28058.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572357|gb|EEX28920.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|290922692|gb|EFD99646.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
          Length = 383

 Score = 39.4 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  +A N PI VL         +Q       +     + K+  + G
Sbjct: 10  FNPFHSGHEFLLNQARLVAGNDPIVVL----MSGNYVQRGE--MAIMSKWERAKVALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  A   I+++    L V  ++ G
Sbjct: 64  ADLVFETPFSTAVEPADLFALGNIEQLA--KLGVTDLVFG 101


>gi|170781174|ref|YP_001709506.1| phosphopantetheine adenylyltransferase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|189082560|sp|B0REL6|COAD_CLAMS RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|169155742|emb|CAQ00863.1| phosphopantetheine adenylyltransferase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 163

 Score = 39.4 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 27/156 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ-- 78
            V  G+FD + LGH  ++ +A ++ +   + V         +           P   +  
Sbjct: 5   AVVPGSFDPVTLGHLDVIRRAARLYDQLVVLV---------VHNPGKTPML--PLEDRVD 53

Query: 79  --EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
             E+++   G  A +R          S    +       +    ++ G + +        
Sbjct: 54  LIERVIRDAGLPATVRVD--------SWGAGLLVDYCRQVGATVLVKGVRSQLDV----A 101

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                    +       +  L +     VSSS +R 
Sbjct: 102 YETPMALVNRDLADVETVMLLPDPAHAHVSSSLVRQ 137


>gi|170289518|ref|YP_001739756.1| pantoate--beta-alanine ligase [Thermotoga sp. RQ2]
 gi|238688808|sp|B1L843|PANC_THESQ RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|170177021|gb|ACB10073.1| pantoate--beta-alanine ligase [Thermotoga sp. RQ2]
          Length = 280

 Score = 39.4 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MKIIETIEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARDEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LEK     +    +   +  + + Y  E  + K
Sbjct: 55  IFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYPPDFSTYVEETKLSK 114

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 115 NLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 174

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 175 IVREPDGLAMSSRNV 189


>gi|109946883|ref|YP_664111.1| nicotinate-nucleotide adenylyltransferase [Helicobacter acinonychis
           str. Sheeba]
 gi|109714104|emb|CAJ99112.1| nicotinate-nucleotide adenylyltransferase [Helicobacter acinonychis
           str. Sheeba]
          Length = 166

 Score = 39.4 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H  H  I+EQ +++   + + VL   P  +   +   P F  +    +E  L  
Sbjct: 10  GSFDPLHKAHLAIIEQTLELLPLADLIVL---PAYQNPFK--KPCFLDAQIRFKELELAL 64

Query: 85  MGFSALIRYKFTLETANYSA--EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            G   ++   F ++        E  +    +   +   ++ G           +   L K
Sbjct: 65  KGMPRVLLSDFEIKQERTVPTIESVLHFQKLYCPKTLYLVIGADCLRHLSSWTNATELLK 124

Query: 143 RGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           R E   F  +  +E++              +SSS IR +L
Sbjct: 125 RVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASL 164


>gi|315929299|gb|EFV08509.1| ATP-sulfurylase family domain protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 305

 Score = 39.4 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|53803928|ref|YP_114175.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Methylococcus capsulatus str. Bath]
 gi|81681874|sp|Q607M3|HLDE_METCA RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|53757689|gb|AAU91980.1| lipopolysaccharide biosynthesis protein RfaE [Methylococcus
           capsulatus str. Bath]
          Length = 473

 Score = 39.4 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 56/179 (31%), Gaps = 40/179 (22%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +++   L    +  VV  G FD +H GH   LEQA  + +   + V              
Sbjct: 327 LDVLIPLRRAGERIVVTNGCFDLLHPGHVHYLEQARALGDRLIVLV-----------NGD 375

Query: 67  SPIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
             +  L       +P   +  +L  +     ++ +         +    I  +       
Sbjct: 376 DSVRRLKGAGRPVNPLPHRMAMLAALESVDWVVAFDGD------TPRDEICAI-----RP 424

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             ++ G  +       G   +L     + G     +D +  +     S++ I  A+  G
Sbjct: 425 HVLVKGGDYADITAIVGHDCVL-----ETGGEVRILDFVEGH-----STTRIIEAIRNG 473


>gi|238785061|ref|ZP_04629057.1| Pantothenate synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714033|gb|EEQ06049.1| Pantothenate synthetase [Yersinia bercovieri ATCC 43970]
          Length = 284

 Score = 39.4 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 67/220 (30%), Gaps = 29/220 (13%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V++   +P    +               + L
Sbjct: 29  TMGN---LHQGHMTLVEDAKTRAD---VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLET-ANYSAEQFIQKVLVEWL-----------EVKTVI------TG 124
            + G   +          A   ++ +++   +  +            V T++        
Sbjct: 83  TRHGVDLVFAPAADDIYPAGLESQTYVEVPALSTILEGASRPGHFRGVSTIVSKLFNLVQ 142

Query: 125 TK-FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
                FG+       +++K     G+    V +  +R      +SS N    LT      
Sbjct: 143 PDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSSRN--GYLTAEERKI 200

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
           A  L      +   +  GE+    L F  A    S     
Sbjct: 201 APQLNKIMQALAKKLSAGERQIDDLLFDAAEQLRSAGFTP 240


>gi|317179802|dbj|BAJ57588.1| pantoate--beta-alanine ligase [Helicobacter pylori F32]
          Length = 276

 Score = 39.4 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 33/231 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR------YKFTLE---------TANY 102
           +P     +        P      + E +G SA+        Y + +E           + 
Sbjct: 55  NPTQFGPNEDFNAYPRPLEKDLALCEGLGVSAVFLPKISEMYPYEIEQRLKLYAPKFLSR 114

Query: 103 SAEQFIQKVLVEW-----LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           S E  +++   +      L++  ++  T+  FGK  A    I+Q   +            
Sbjct: 115 SLEAAMREGHFDGVVQVVLKLFHLVNPTRAYFGKKDAQQLLIIQHLVKDLLLDIEIAPCE 174

Query: 157 -LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +R++ +  +SS N+   L       A  +     +I+  +  GEK    L
Sbjct: 175 IVRDSDNLALSSRNV--YLNATQRKQALAIPKALESIKQAIDKGEKACEKL 223


>gi|283779803|ref|YP_003370558.1| pantoate/beta-alanine ligase [Pirellula staleyi DSM 6068]
 gi|283438256|gb|ADB16698.1| pantoate/beta-alanine ligase [Pirellula staleyi DSM 6068]
          Length = 305

 Score = 39.4 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 70/256 (27%), Gaps = 44/256 (17%)

Query: 2   HVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
            V HN+   QSL    +        V  +G    +H GH  ++  A +  +    T+   
Sbjct: 6   QVIHNVREMQSLVLAWRRAGLRSGLVPTMG---ALHAGHISLIHAAREKCDRVAATIFV- 61

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK--------FTLETANYSAEQF 107
             +P                     +L + G  A+            F+      S  Q 
Sbjct: 62  --NPTQFGPKEDFSKYPRTLDADLAMLSEAGCDAVFVPDREAMYPSGFSTSVEPPSVSQP 119

Query: 108 IQKVLVEW---------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFIDE 156
           ++ V             L++  +       FG        ++Q                 
Sbjct: 120 LEGVCRPGHFRGVVTVVLKLFGIAPTDASFFGHKDYQQARVIQAMASDLNVPMEVHICPT 179

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLS 216
           +R      +SS N    L+      A  L          +  GE         TA +  +
Sbjct: 180 VREPDGLAMSSRN--RYLSPEERQRALSLWRALERCRLQLACGEHR-------TAELAAA 230

Query: 217 PDILLKEGV----YAI 228
            +  L  GV    YA+
Sbjct: 231 MEKELISGVDAIEYAV 246


>gi|195977714|ref|YP_002122958.1| phosphopantetheine adenylyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|229541061|sp|B4U1S8|COAD_STREM RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|195974419|gb|ACG61945.1| phosphopantetheine adenylyltransferase CoaD [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 166

 Score = 39.4 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 29/155 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++++A  +  +  + + + NP+ ++               ++ ++L +
Sbjct: 10  GSFDPVTNGHMDMIKRASHLFEHVYVGIFN-NPNKQSFF----------TFELRAQMLRE 58

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
               A+            SAE  +   L   L V  +I G      F +          L
Sbjct: 59  ----AVCALP---NVTVVSAEHGLAVDLARELSVTHLIRGLRNTADFDYEAG-------L 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +    +       I  + N+  Q +SSS IR  + 
Sbjct: 105 EYFNHRLAPDIETIYLMANHDLQPISSSRIRELIA 139


>gi|319891639|ref|YP_004148514.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161335|gb|ADV04878.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323465194|gb|ADX77347.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus
           pseudintermedius ED99]
          Length = 132

 Score = 39.4 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 57/159 (35%), Gaps = 33/159 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   +  LS +              +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYL-VVALSSDE-----FNRIKNKKSYYNFEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I             +   ++  VE  E+ T + G  +       G+   
Sbjct: 58  MLESIRYVDLVIPEN----------DWGQKETDVEKYEIDTFVMGHDW------EGEFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L+ + E           +   +++ +S++ I+  L    
Sbjct: 102 LKDKCEV----------IYLKRTEGISTTQIKQELYGKD 130


>gi|260220388|emb|CBA27877.1| Pantothenate synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 274

 Score = 39.4 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 20/112 (17%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLS---- 54
           M + H I E+ ++L  +    VV  +GN   +H GH  ++ QA  + + +  T+      
Sbjct: 1   MQLIHTIAELREALSQYRHPAVVPTMGN---LHAGHLALVRQAKPLGDVTISTIFVNRLQ 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
           F PH                     + LE  G   +    F  + +    + 
Sbjct: 58  FAPH-------EDFDTYPRTLEADCEHLEAAGCDIV----FAPKESELYPQA 98


>gi|317013430|gb|ADU80866.1| pantoate--beta-alanine ligase [Helicobacter pylori Gambia94/24]
          Length = 276

 Score = 39.4 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRALETIATLREYRKSLKKSVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + EK+G +A+    F  +       +  Q++ +
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKLGVNAV----FAPKIGEMYPYEAEQRLKL 106


>gi|315281833|ref|ZP_07870376.1| glycerol-3-phosphate cytidylyltransferase [Listeria marthii FSL
           S4-120]
 gi|313614520|gb|EFR88121.1| glycerol-3-phosphate cytidylyltransferase [Listeria marthii FSL
           S4-120]
          Length = 127

 Score = 39.4 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +LE+A  + +   + + +                       ++ 
Sbjct: 4   VITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDE------FNRIKHKEAYHNFEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  +       G+  
Sbjct: 58  ILEAIKYVDEVI-----------PESNWEQKLEDVKNRDIDIFVMGDDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S+S I+  L
Sbjct: 101 FLKPYC-----EVVYLP-----RTDGISTSKIKDDL 126


>gi|42519613|ref|NP_965543.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus johnsonii
           NCC 533]
 gi|227889438|ref|ZP_04007243.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|41583902|gb|AAS09509.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus johnsonii
           NCC 533]
 gi|227849916|gb|EEJ60002.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|329667859|gb|AEB93807.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus johnsonii
           DPC 6026]
          Length = 128

 Score = 39.4 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 57/156 (36%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A  + +   + + +         + S      +  + ++ 
Sbjct: 4   IITYGTFDLLHYGHIRLLKRARALGDYLIVGLST-----DEFNEFSKHKQAYNSYAERKY 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I             E + QK+  V+  ++ T + G  +       G   
Sbjct: 59  ILEAIRYVDKVI-----------PEENWDQKINDVQKYDIDTFVMGNDW------EGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+   +               ++  +S++ I+  L
Sbjct: 102 FLKPYCKVEYLE----------RTPGISTTQIKKDL 127


>gi|330718827|ref|ZP_08313427.1| glycerol-3-phosphate cytidylyltransferase [Leuconostoc fallax KCTC
           3537]
          Length = 143

 Score = 39.4 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 32/162 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L +A ++ +   + + +          +S    T      +++
Sbjct: 4   IITYGTFDMLHYGHINLLRRAKEMGDYLIVALST-----DEFNWNSKQKKTYFSYEKRKQ 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QKV  V+  +V T + G  +      AG   
Sbjct: 59  LLEAIRYVDLVI-----------PEESWDQKVADVDLYKVDTFVMGDDW------AGQFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
            +    +    +     E        +S++ I+  L   ++ 
Sbjct: 102 FIANETDAEVVYLARTPE--------ISTTQIKKDLNSKNMA 135


>gi|296242241|ref|YP_003649728.1| glycerol-3-phosphate cytidylyltransferase [Thermosphaera aggregans
           DSM 11486]
 gi|296094825|gb|ADG90776.1| Glycerol-3-phosphate cytidylyltransferase [Thermosphaera aggregans
           DSM 11486]
          Length = 241

 Score = 39.4 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  VV  G+F+ +H GH  +L++A ++   S   ++S + +     +       L P + 
Sbjct: 96  RKRVVVAGSFEFLHPGHLFLLKKAWEL--GSVTVIVSRDKN----FERFKNRKPLLPDTA 149

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +++IL+          KF  E      E F++ V+   L+   ++ G             
Sbjct: 150 RKEILDS--------VKFVDEAVLGDEEDFLKPVV--ELKPDIILLGPDQWI------TP 193

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
             L+++  + G   V + +L        SSS I   L K     +  
Sbjct: 194 EELKEKLSERGLSNVIVLKLEERVGDW-SSSRILEILKKTACNQSQE 239


>gi|255027462|ref|ZP_05299448.1| hypothetical protein LmonocytFSL_15923 [Listeria monocytogenes FSL
           J2-003]
          Length = 331

 Score = 39.4 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTLAAKK 116


>gi|219850983|ref|YP_002465415.1| cytidyltransferase-related domain protein [Methanosphaerula
           palustris E1-9c]
 gi|327488415|sp|B8GJN8|RIBL_METPE RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|219545242|gb|ACL15692.1| cytidyltransferase-related domain protein [Methanosphaerula
           palustris E1-9c]
          Length = 153

 Score = 39.4 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 47/159 (29%), Gaps = 25/159 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +VA G FD +H GH   L+++ K+ +   + V       R +         + P   + +
Sbjct: 4   IVATGTFDLLHPGHLFYLQESKKLGDELYVIVA----RDRNV---KHKPRPIIPEEQRLQ 56

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++  +      +    T       A           +    +  G    F      D  +
Sbjct: 57  MVAALKPVDHALLGDTTDMFRPIEA-----------IRPDVITLGFNQNF------DPAV 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L +  +        +         + SS  I   + +  
Sbjct: 100 LTEALKARSLSAEVVRIGGYGDRVLCSSRRIVQRVIETR 138


>gi|315453158|ref|YP_004073428.1| putative pantoate--beta-alanine ligase [Helicobacter felis ATCC
           49179]
 gi|315132210|emb|CBY82838.1| putative pantoate--beta-alanine ligase [Helicobacter felis ATCC
           49179]
          Length = 272

 Score = 39.4 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++EQA    +   + V+S   +P     +              K+ E +G   
Sbjct: 27  LHPGHASLIEQARAQND---VVVVSIFVNPTQFGPNEDYQAYPRTLQADLKLCESLGVDV 83

Query: 90  LIRYKFTLETANYSA 104
           L    FT ++A    
Sbjct: 84  L----FTPDSAQIYP 94


>gi|284030692|ref|YP_003380623.1| cytidyltransferase-related domain-containing protein [Kribbella
          flavida DSM 17836]
 gi|283809985|gb|ADB31824.1| cytidyltransferase-related domain protein [Kribbella flavida DSM
          17836]
          Length = 142

 Score = 39.4 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 25 GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
          G FD  H+GH  +LEQA +  +   + VL+       +    S  F   P   + +IL++
Sbjct: 10 GVFDLFHVGHLDLLEQARQQCDRLVVGVLTDE---WAVDAWGSRPFV--PLVERAQILDQ 64

Query: 85 M 85
          +
Sbjct: 65 L 65


>gi|259415433|ref|ZP_05739354.1| pantoate--beta-alanine ligase [Silicibacter sp. TrichCH4B]
 gi|259348663|gb|EEW60425.1| pantoate--beta-alanine ligase [Silicibacter sp. TrichCH4B]
          Length = 280

 Score = 39.4 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%)

Query: 4  FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
             +  +  L     G V  +G    +H GH  ++E A    N+    V++   +P+   
Sbjct: 12 LRALRRDWMLKGETLGLVPTMG---ALHAGHLSLVEAAKSACNH---VVVTIFVNPKQFN 65

Query: 64 QSSSPIFTLSPPSIQEKILEKMGFSALIR 92
                          + L   G  A+  
Sbjct: 66 SPEDLANYPRTEHEDAEKLAPFGVDAIYV 94


>gi|1125683|emb|CAA60586.1| glycerol-3-phosphate cytidyltransferase [Staphylococcus aureus]
 gi|1125687|emb|CAA60583.1| glycerol-3-phosphate cytidyltransferase [Staphylococcus aureus]
 gi|1262138|emb|CAA62900.1| glycerol 3-phosphate cytidyltransferase [Staphylococcus aureus]
          Length = 132

 Score = 39.4 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 58/160 (36%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKHKKSYYDYEQRKM 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE + + +L+             E+    ++  VE  +V   + G  +       G+  
Sbjct: 58  MLESIRYVSLVI-----------PEKGWGQKEDDVEKFDVDVFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+ + E           +   +++ +S++ I+  L    
Sbjct: 101 FLKDKCEV----------IYLKRTEGISTTKIKQELYGKD 130


>gi|315125017|ref|YP_004067021.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018739|gb|ADT66832.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|86152944|ref|ZP_01071149.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843829|gb|EAQ61039.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|330507536|ref|YP_004383964.1| cytidyltransferase-like domain-containing protein [Methanosaeta
           concilii GP-6]
 gi|328928344|gb|AEB68146.1| cytidyltransferase-related domain protein [Methanosaeta concilii
           GP-6]
          Length = 143

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 25/158 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD +H GH L LE++  + +   + V       R +         L P   + +
Sbjct: 4   VVATGTFDLLHPGHVLYLERSKALGDELVVIV------ARDVNVRHKAKPIL-PEEQRRR 56

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++E +      I  +                  +E L    +  G    F      D   
Sbjct: 57  MIESLKPVDRAILGEVGDIFR-----------TIEDLRPDIITLGFDQHF------DPLR 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           L+    + G H   +        ++ SS  I   + + 
Sbjct: 100 LEHDLFRRGLHPRIVRIEEQEPCELCSSRRIVNKILER 137


>gi|284926804|gb|ADC29156.1| putative sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|269468757|gb|EEZ80369.1| panthothenate synthetase [uncultured SUP05 cluster bacterium]
          Length = 279

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 16/123 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF+ I   Q+  +  +        V  +G   G+H GH  +++ A + A+     V+S
Sbjct: 2   MQVFNTITALQNTLDDWRAKDRTIAFVPTMG---GLHDGHLALVKLAKQKADK---VVVS 55

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++       +       +LE+     L    F+        +     + + 
Sbjct: 56  IFVNPTQFSENEDFDQYPNTFEQDVLLLERNQVDGL----FSPSVEQIYPQGLDADIDIG 111

Query: 115 WLE 117
            + 
Sbjct: 112 EIG 114


>gi|224536721|ref|ZP_03677260.1| hypothetical protein BACCELL_01597 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521637|gb|EEF90742.1| hypothetical protein BACCELL_01597 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 164

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 27/158 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G+FD  H+GH  ILE++  + +   + V +       +IQ    +  + P   + +
Sbjct: 8   VFTSGSFDLFHIGHLNILERSAALGDELIVGVST-----DELIQHYKGMPPIIPFEQRFR 62

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +   +  ++     E A    E            +  V  G  +            
Sbjct: 63  IISSLKCVTKAVKQVKLTEVAQLQRED-----------IDIVTIGDDWINKY-----LEG 106

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           L+   ++ G   V+        +  VS++ I+  + + 
Sbjct: 107 LEWMKQQPGKEVVYFP-----YTPDVSTTGIKKKIIES 139


>gi|148925753|ref|ZP_01809441.1| possible sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845763|gb|EDK22854.1| possible sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|57238622|ref|YP_179753.1| ATP-sulfurylase family protein [Campylobacter jejuni RM1221]
 gi|57167426|gb|AAW36205.1| ATP-sulfurylase family protein [Campylobacter jejuni RM1221]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|82750344|ref|YP_416085.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           RF122]
 gi|82655875|emb|CAI80279.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           RF122]
          Length = 132

 Score = 39.4 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKHKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E+    ++  VE  +V   + G  +       G+ 
Sbjct: 58  MLESIRYVDLVI------------PEKGWGQKEDDVEKFDVDVFVMGHDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ R E           +   +++ +S++ I+  L    
Sbjct: 100 DFLKDRCEV----------IYLKRTEGISTTKIKQELYGKD 130


>gi|253744601|gb|EET00787.1| Hypothetical protein GL50581_1961 [Giardia intestinalis ATCC
          50581]
          Length = 262

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 6  NIEINQSLPNHLKGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVL 53
          N E    LP+  K   V +G +FD IH GH L+L  A+       I ++
Sbjct: 12 NPETLPELPHVSKSTTVCLGGSFDRIHRGHLLLLAVAVACVEKGGIILV 60


>gi|182435345|ref|YP_001823064.1| putative glycerol-3-phosphate cytidyltransferase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326775984|ref|ZP_08235249.1| cytidyltransferase-related domain protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|178463861|dbj|BAG18381.1| putative glycerol-3-phosphate cytidyltransferase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326656317|gb|EGE41163.1| cytidyltransferase-related domain protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 149

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 26/152 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S        +          P   + +I+  
Sbjct: 11  GVYDLFHVGHLNILRHARSQCDYLVAGVVSDE---MAALAKGHTPMI--PLRERLEIVRS 65

Query: 85  MGFSALIRYKF-TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                    +F          ++      V +     +  G  +R G D+      L++ 
Sbjct: 66  --------VRFVDAAFVETVPDKVETWQQVRF---DVIFKGDDWR-GTDKG---EKLERD 110

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             + G   V+        +   SS+ +R AL 
Sbjct: 111 FAEVGVEVVYFP-----YTVHTSSTQLRRALD 137


>gi|153831522|ref|ZP_01984189.1| bifunctional protein HldE [Vibrio cholerae 623-39]
 gi|148872996|gb|EDL71131.1| bifunctional protein HldE [Vibrio cholerae 623-39]
          Length = 144

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 28  IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGPG 86

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 87  RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 132

Query: 126 KFR 128
            ++
Sbjct: 133 DYK 135


>gi|308062876|gb|ADO04763.1| pantoate--beta-alanine ligase [Helicobacter pylori Sat464]
          Length = 276

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRALETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR------YKFTLE---------TANY 102
           +P     +        P      + E++G SA+        Y + +E           + 
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCERLGVSAVFVPKTSEIYPYEIEQRLKLYAPTFLSS 114

Query: 103 SAEQFIQKVLVEW-----LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           S E  +++   +      L++  ++  T+  FGK  A    I+Q   +        +   
Sbjct: 115 SLEAAVREGHFDGVVQVVLKLFHLVNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIVPCE 174

Query: 157 -LRNNKSQIVSSSNI 170
            +R++ +  +SS N+
Sbjct: 175 IMRDSDNLALSSRNV 189


>gi|262374301|ref|ZP_06067577.1| pantoate-beta-alanine ligase [Acinetobacter junii SH205]
 gi|262310859|gb|EEY91947.1| pantoate-beta-alanine ligase [Acinetobacter junii SH205]
          Length = 281

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 21/122 (17%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +GN   +H GH  ++ +A KI +   + V+S   +P                   
Sbjct: 25  GFVPTMGN---LHEGHLTLVREAKKICD---VVVVSIFVNPIQFGAGEDFDSYPRTLEQD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT--KFRFGKDRAGD 136
            ++L  +G   +         A       ++++      +  +  G       GK R G 
Sbjct: 79  SRLLADVGCDII--------FA-----PSVEQMYGSQPRLTNISVGQITDDLCGKSRPGH 125

Query: 137 RG 138
             
Sbjct: 126 FD 127


>gi|50289297|ref|XP_447079.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526388|emb|CAG60012.1| unnamed protein product [Candida glabrata]
          Length = 304

 Score = 39.4 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 1  MHVFHNIE--INQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITV 52
          M VFH I+  +N    +      ++IG    +      H GH  ++ ++    +    TV
Sbjct: 1  MRVFHTIKEVVNWRRNDVGDRRALSIGF---VPTMGALHEGHATLIRESKSQND---YTV 54

Query: 53 LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
          +S   +P                    ++LE +G  AL 
Sbjct: 55 VSIFVNPSQFAPDEDLDKYPRTLEKDIELLESLGCDALF 93


>gi|299822618|ref|ZP_07054504.1| glycerol-3-phosphate cytidylyltransferase [Listeria grayi DSM
           20601]
 gi|299816147|gb|EFI83385.1| glycerol-3-phosphate cytidylyltransferase [Listeria grayi DSM
           20601]
          Length = 136

 Score = 39.4 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 41/166 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FN--PHPRTIIQSSSPIFTLSPPS 76
           V+  G FD +H GH  +L++A  + +   + + +  FN   H ++     +    L    
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKSLGDYLVVAISTDEFNAVKHKQSFHNYENRKLILEAIR 63

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAG 135
                        +I               + QK+  V+  ++   + G  +       G
Sbjct: 64  Y---------VDEVI-----------PENDWEQKISDVQAHDIDIFVMGNDW------EG 97

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
               L+   E           +   +++ +S++ I+  L+  +  +
Sbjct: 98  KFDFLKDYCEV----------IYLERTEGISTTQIKKDLSGSNNKD 133


>gi|330886480|gb|EGH20221.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 474

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAV----NDDASVSRPKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +            +  ++ L+  ++   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVISFP-----------EGTRENLLSHVKPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 435 GVDQVVGADIVQA----YGGDVRVLGLVENS-----STTAIVEKI 470


>gi|327184014|gb|AEA32461.1| hypothetical protein LAB52_07710 [Lactobacillus amylovorus GRL
           1118]
          Length = 383

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           I  F+  H GH  +L QA  IA N PI ++         +Q       +     + K   
Sbjct: 7   ISEFNPFHSGHEFLLNQARLIAQNDPIVII----MSGNYVQRGE--MAIMSKWERAKAAL 60

Query: 84  KMGFSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
           + G   +    F+     A+  +   I+++    L V  ++ G
Sbjct: 61  QSGADLVFEMPFSTAVEPADLFSLGNIEQLS--KLGVTDLVFG 101


>gi|317013124|gb|ADU83732.1| nicotinate-nucleotide adenyltransferase [Helicobacter pylori
           Lithuania75]
          Length = 171

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++     + VL                  L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFVKLIVL------PAYQNPFKKPCFLDAKTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 69  LK--GMPRVLLSDFEIKQERAVPTIESTLHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 169


>gi|315059060|gb|ADT73389.1| Possible sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|116749120|ref|YP_845807.1| cytidyltransferase-like protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698184|gb|ABK17372.1| cytidyltransferase-related domain [Syntrophobacter fumaroxidans
           MPOB]
          Length = 169

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 27/161 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +HLGH   LE+A  + +   + V + +     I     P+   +  + 
Sbjct: 25  RRIVFTNGCFDLLHLGHVRYLEEARSLGDVLIVGVNT-DRSVSEIKGPRRPV---TGQAE 80

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + ++L  +     ++ +         + +      L+  LE   ++ G  +  G+    D
Sbjct: 81  RSEVLAALQCVDHVVLFD--------TPDPLP---LIVALEPDVLVKGADWAEGRIVGAD 129

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
               +      G   V I  + N      S+++I   + + 
Sbjct: 130 VVTAK------GGRVVRIPLIPNA-----STTSIIDRILER 159


>gi|320530314|ref|ZP_08031382.1| putative protein RfaE, domain II [Selenomonas artemidis F0399]
 gi|320137457|gb|EFW29371.1| putative protein RfaE, domain II [Selenomonas artemidis F0399]
          Length = 514

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 39/268 (14%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSP 68
           + Q   +  K  V+  G FD +H GH   +E   +      I V+S        +     
Sbjct: 15  LRQGFRDAGKKVVLCHGVFDLLHYGH---IEHLEEAKRQGDILVVSVT--AARYVNKGPG 69

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
                    +   L  +     ++            +E      +V +++      G ++
Sbjct: 70  RPYFDD-RQRMAFLSSLEIVDYVLL-----------SEAVTVHEIVSFVQPDVYAKGQEY 117

Query: 128 RFGKDR-AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
              +D   G+ G  Q   EKYG        +   + ++ SS+ +          N   + 
Sbjct: 118 ARAEDDVTGNIGAEQSVVEKYGGR------IFFTQGEVHSSTKLLNNFFAALPENVKEMA 171

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSYSGVANFGR 246
                        +       F    + +  D+++      +    Q  T      +   
Sbjct: 172 FSLRKRHGTNAFAQMRDAVENFSNTKVLVVGDVIIDA---YVFCNVQGVTMKDATIS--- 225

Query: 247 NPTMVP------NGPLLLESFIFDFSQE 268
             T          G L +   + +FSQ 
Sbjct: 226 --TFCDSEENYAGGSLAIARHLANFSQN 251


>gi|237740527|ref|ZP_04571008.1| ligase [Fusobacterium sp. 2_1_31]
 gi|229422544|gb|EEO37591.1| ligase [Fusobacterium sp. 2_1_31]
          Length = 348

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 159 LGHQYLVEKAASENDILHLFIVSDDSSLVPFKVRKKLVIEGTKHLKNICYHETGDYIISS 218

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +  + + L +     G +         ++ 
Sbjct: 219 ATFPSYFQKDEVAVI---ESQANLDIEIFSR--IAKALNINRRYVGEEPNSLVTNIYNQT 273

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      V +   + +    +S+S +R  +  G++ +  +L
Sbjct: 274 MLKKLPE-NNIECVVVPRKKYSDKV-ISASTVRQIIKDGNLEDLKNL 318


>gi|119715926|ref|YP_922891.1| glycerol-3-phosphate cytidylyltransferase [Nocardioides sp. JS614]
 gi|119536587|gb|ABL81204.1| Glycerol-3-phosphate cytidylyltransferase [Nocardioides sp. JS614]
          Length = 132

 Score = 39.4 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 41/112 (36%), Gaps = 16/112 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +   V+  G FD  H+GH  ++E+A  + +   + V +   + R   +   P+F     +
Sbjct: 1   MSRTVITFGTFDVFHVGHLRVIERAAALGDRLVVGVSADELNLRK--KGREPVF---SQA 55

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            +  I+  +     +                 +++  +E      ++ G  +
Sbjct: 56  ERLAIVAALKPVDEVFV----------EESLELKRHYIEEYAADVLVMGDDW 97


>gi|298492595|ref|YP_003722772.1| pantoate/beta-alanine ligase ['Nostoc azollae' 0708]
 gi|298234513|gb|ADI65649.1| pantoate/beta-alanine ligase ['Nostoc azollae' 0708]
          Length = 539

 Score = 39.4 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 64/222 (28%), Gaps = 50/222 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G   G+H GH  ++E+A +  +     ++S   +P                   
Sbjct: 43  GLVPTMG---GLHQGHLSLIEKARQENS---TVIVSIFVNPLQFGPQEDYQRYPRTLEQD 96

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI---------TG----- 124
           +++  + G  A+         A    E  I +  ++  +V  VI          G     
Sbjct: 97  QELCVQAGVDAI--------FAPTPEEMGIPQKNIQETQVTQVIPPSGMISTLCGRYRPG 148

Query: 125 ------------------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQI 164
                              +  FG+       I+++           +    +R      
Sbjct: 149 HFQGVATIVTKLFNLVQPDRAYFGQKDGQQLAIIKRLVADLNLPVEIVACPTVREASGLA 208

Query: 165 VSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +SS N    L+      A  L       E+    G++    L
Sbjct: 209 LSSRN--QYLSATEKEQATVLYKGLQQAEAAFRAGDRNSSQL 248


>gi|86149461|ref|ZP_01067692.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596373|ref|ZP_01099610.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218563198|ref|YP_002344978.1| putative sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840243|gb|EAQ57501.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191214|gb|EAQ95186.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360905|emb|CAL35706.1| putative sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315927644|gb|EFV06975.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 386

 Score = 39.4 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRT 61
           E  Q + N+L    +   + +FD +H  H  +    I  A+   + V+    SF+ +   
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD---LVVIFLVESFDVNGFE 193

Query: 62  IIQSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLV 113
                          ++E  L+K     +    +  +      +  A+ +    ++ ++ 
Sbjct: 194 F-------------ELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIA 238

Query: 114 EWLEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + L    ++ G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 239 KSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|238021980|ref|ZP_04602406.1| hypothetical protein GCWU000324_01885 [Kingella oralis ATCC 51147]
 gi|237866594|gb|EEP67636.1| hypothetical protein GCWU000324_01885 [Kingella oralis ATCC 51147]
          Length = 277

 Score = 39.4 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV------AIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           MH+FH I   +      +  V        +GN   +H GH  ++E+A + A +    V+S
Sbjct: 1   MHIFHTIAELR----QWRKTVANIAFVPTMGN---LHDGHLALVERAKQEAEH---VVVS 50

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +     Q           +     L   G +A+    F  + A        Q+  VE
Sbjct: 51  IFVNRIQFGQGEDFDQYPRTLAQDADKLRAAGVAAV----FAPDEAELYP-AGEQQYFVE 105

Query: 115 WLEVKTVITG 124
              +K  + G
Sbjct: 106 PPALKHELCG 115


>gi|78776562|ref|YP_392877.1| pantoate--beta-alanine ligase [Sulfurimonas denitrificans DSM 1251]
 gi|123550811|sp|Q30TN9|PANC_SULDN RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|78497102|gb|ABB43642.1| pantothenate synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 273

 Score = 39.4 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 34/192 (17%)

Query: 1   MHVFHN-IEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +  N +E+ + L +  +  G +  +G    +H GH  ++++A +      + V+S   
Sbjct: 1   MKIISNPLELKEYLKDEKRSIGFIPTMG---ALHEGHIALIKKAKEQNE---LVVVSIFL 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFT-----LETANY---------- 102
           +P   ++               +I +  G   L            E +            
Sbjct: 55  NPTQFLKGEDLDKYPKKDEADRQICKLCGVDILFFPHVDGIYGSDEVSLLAPKIRGFVLE 114

Query: 103 -----SAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF--ID 155
                S    +  V+++ L    ++   +  FGK  A    ++    ++         +D
Sbjct: 115 GQSRPSHFNGVLTVVMKLLN---IVRPKRAYFGKKDAQQLNLISLMVKQLFMSVEIVAVD 171

Query: 156 ELRNNKSQIVSS 167
            +R      +SS
Sbjct: 172 TVREKDGLALSS 183


>gi|296274390|ref|YP_003657021.1| pantoate/beta-alanine ligase [Arcobacter nitrofigilis DSM 7299]
 gi|296098564|gb|ADG94514.1| pantoate/beta-alanine ligase [Arcobacter nitrofigilis DSM 7299]
          Length = 274

 Score = 39.4 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 79/229 (34%), Gaps = 31/229 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + + IE  Q++   LKG    V  +G    +H GH  +++ A     N+ I ++S   
Sbjct: 1   MKIINTIEELQTIRKELKGTIGFVPTMG---ALHEGHISLIKNARI---NNDIVIVSIFL 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTL------ETANYSAEQFIQKV 111
           +P   + +          +  ++I E      L             E +  + +     +
Sbjct: 55  NPTQFLPNEDLDKYPKKDAADKRICELCKVDYLFMPDVNSMYQSNDEISIKAPKITGFIL 114

Query: 112 LVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFIDEL 157
             E             L++  ++  +   FGK  A    ++ +  +      + V  D +
Sbjct: 115 EGEKRPGHFDGVLQVVLKLFNLVQPSNAYFGKKDAQQLSLISQMVKNLFLPINIVECDII 174

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           R      +SS NI   L+      A  +          V  GE+  +T+
Sbjct: 175 READGLAMSSRNI--YLSAEERKEALAISKSLNMTIIAVTKGERDAQTI 221


>gi|320007955|gb|ADW02805.1| cytidyltransferase-related domain protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 149

 Score = 39.4 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 24/151 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S     R   +  +P+    P + + +I+  
Sbjct: 11  GVYDLFHVGHLNILRHARSQCDYLVAGVVSDEMAARA--KGHTPVI---PLAERLEIVR- 64

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +              ++      V +     +  G  +R         G  +   
Sbjct: 65  -GVRYV-----DAAFVETVPDKVETWQQVRF---DVLFKGDDWR---------GTEKGER 106

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +  F  V ++ +    +   SS+ +R AL 
Sbjct: 107 LERDFAAVGVEVVYFPYTVHTSSTQLRRALD 137


>gi|297569816|ref|YP_003691160.1| phosphoenolpyruvate phosphomutase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925731|gb|ADH86541.1| phosphoenolpyruvate phosphomutase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 439

 Score = 39.4 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 23/141 (16%)

Query: 28  DGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           D +H GH  IL +A K+     + +L+        I S   +  ++    +E +    G 
Sbjct: 16  DLVHPGHLNILREARKLGR-VVVGLLT-----DQAIASYKRLPHMTFEQRKEVVENLKGV 69

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
             ++               ++  + +  +    V+ G  +R G  +   + +++    ++
Sbjct: 70  DEVV---------GQETLDYVPNLRL--IRPDYVVHGDDWRQGVQKQTRQRVIEAL-AEW 117

Query: 148 GFHTVFIDELRNNKSQIVSSS 168
           G   V +       +  +SS+
Sbjct: 118 GGELVEVP-----YTPDISST 133


>gi|322379579|ref|ZP_08053916.1| Bifunctional protein HldE [Helicobacter suis HS1]
 gi|322379634|ref|ZP_08053955.1| ADP-heptose synthase [Helicobacter suis HS5]
 gi|321147928|gb|EFX42507.1| ADP-heptose synthase [Helicobacter suis HS5]
 gi|321147973|gb|EFX42536.1| Bifunctional protein HldE [Helicobacter suis HS1]
          Length = 485

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 26/132 (19%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSF 55
            +     +   L +  K  V   G FD +H GH   L++A K+ +      NS  +V   
Sbjct: 338 KILDKHTLQAILSSSTKRVVFTNGCFDVLHRGHVYYLQEAKKLGDILVVGLNSDSSV--- 394

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
                T ++ +     +     +  IL  +         F +     +  + I     + 
Sbjct: 395 -----TALKGNKRP--IYHQEDRAFILASLE-----CVDFVVIFEEQTPLELI-----KT 437

Query: 116 LEVKTVITGTKF 127
           L+ + ++ G  +
Sbjct: 438 LKPQILVKGADY 449


>gi|317153684|ref|YP_004121732.1| cytidyltransferase-like domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943935|gb|ADU62986.1| cytidyltransferase-related domain protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 507

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 23/181 (12%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE+        +  V   G FD +H+GH     QA +  +   +TV      P   +   
Sbjct: 14  IEVVAEFRKQGRKVVHCHGVFDLLHIGHIRYFRQAAQWGDVLVVTV-----SPDRFVDKG 68

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           S     +   ++ + +        +             +    + L+  L     + G+ 
Sbjct: 69  SHRPAFTEV-LRAEAVASQDVVDFVAIN----------QWPTAEELLRKLRPDVYVKGSD 117

Query: 127 FR-FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           F+    D  G   +  +  E+ G       ELR  +  + SS+N+               
Sbjct: 118 FKSIDSDPTGKLRLEAEVCEEIG------AELRLTQEIVFSSTNLINRFMSAFPDEVKEY 171

Query: 186 L 186
           L
Sbjct: 172 L 172


>gi|269958470|ref|YP_003328257.1| pantoate--beta-alanine ligase [Anaplasma centrale str. Israel]
 gi|269848299|gb|ACZ48943.1| pantoate--beta-alanine ligase [Anaplasma centrale str. Israel]
          Length = 277

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 64/218 (29%), Gaps = 45/218 (20%)

Query: 1   MHVFHNIE----INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M +  ++E    + +   N   G V  +G    +H GH   L    ++  ++ + V+S  
Sbjct: 1   MEIVRDVESVRAVLRPFTNRKIGLVPTMG---ALHSGH---LSLVHEMKKHADVVVVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRY-----------------KFTLET 99
            +P                 +  +     G   +                        E 
Sbjct: 55  VNPLQFSPGEDYEKYPRCEEVDCEKCASAGVDVVYIPSAEGMYPDGFSTSVDIGPMAREL 114

Query: 100 ANYSAEQFIQKVLVEWL------EVKTVITGT-KFRFGKDRAGDRGILQKRGEKYGFHTV 152
              S + FI  ++V  +          +I G   ++          + ++          
Sbjct: 115 CGASRQNFINGIMVVLIKLVMQTNAHCMILGEKDYQM-------LHLTRQLFRDLNIGVD 167

Query: 153 FID--ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            +    +R+ +   +SS +    L+   +  A  L G+
Sbjct: 168 VLQGNTVRSAEGLALSSRH--QYLSSAEITKANFLYGF 203


>gi|255007809|ref|ZP_05279935.1| putative pantoate--beta-alanine ligase [Bacteroides fragilis
           3_1_12]
 gi|313145514|ref|ZP_07807707.1| pantoate-beta-alanine ligase [Bacteroides fragilis 3_1_12]
 gi|313134281|gb|EFR51641.1| pantoate-beta-alanine ligase [Bacteroides fragilis 3_1_12]
          Length = 282

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 39/207 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+  + LK      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELSVLKAQGKKVGLVPTMG---ALHAGHASLVKRSVNENE---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +          K+LE  G           +     T + +      
Sbjct: 55  VFVNPTQFNDKNDLVKYPRTLDADCKLLEACGATYTFAPSVEEMYPEPDTRQFS----YA 110

Query: 107 FIQKVLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            +  V+                     V+   +  FG+       I+++   +  F    
Sbjct: 111 PLDTVMEGAFRPGHFNGVCQIVSKLFEVVKPHRAYFGEKDFQQLAIIREMVRQMQFDLEI 170

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGH 178
           +    +R      +SS N R +  +  
Sbjct: 171 VGCPIVREEDGLALSSRNARLSAEERE 197


>gi|16082156|ref|NP_394596.1| aut related protein [Thermoplasma acidophilum DSM 1728]
 gi|74557691|sp|Q9HJ34|RIBL_THEAC RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|10640451|emb|CAC12265.1| Aut related protein [Thermoplasma acidophilum]
          Length = 142

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 25/157 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD IHLGH   L ++ K+ +   + V       R      +    +   + + K
Sbjct: 4   VMATGVFDIIHLGHIHYLRESKKLGDELVVVV------ARDSTARKNGKVPIFDENSRLK 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++ ++      I             E  + K +VE +    +  G   +F      D   
Sbjct: 58  LVSELKPVDRAI----------LGHEDDMMKTVVEVM-PDIITLGYDQKF------DEAD 100

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L+++ ++ G ++  +  +      + SSS +R  + +
Sbjct: 101 LKRKLDQIGVNSRIV-RISKYDGNLNSSSMVRKKIME 136


>gi|114564361|ref|YP_751875.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Shewanella frigidimarina NCIMB 400]
 gi|122298845|sp|Q07Y78|HLDE_SHEFN RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|114335654|gb|ABI73036.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase [Shewanella
           frigidimarina NCIMB 400]
          Length = 476

 Score = 39.4 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 37/162 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-----LSFNPHPRTIIQSSSPIFTLSPP 75
           V+  G FD +H GH   L+QA  + +   + V     ++       +     P+   +P 
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVT------RLKGPGRPV---NPV 394

Query: 76  SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             +  +L  +     ++   FT +    + ++ I ++L + L     + G  ++  +D A
Sbjct: 395 DRRMAVLAGLASVDWVV--PFTED----TPQRIITRLLPDSL-----VKGGDYKV-EDIA 442

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           G   ++       G     +          VS++ I   +  
Sbjct: 443 GGAEVIAA-----GGKVEVL-----GFEDGVSTTAIIQNIMS 474


>gi|225621086|ref|YP_002722344.1| pantoate-beta-alanine ligase [Brachyspira hyodysenteriae WA1]
 gi|225215906|gb|ACN84640.1| pantoate-beta-alanine ligase; pantothenate synthase [Brachyspira
           hyodysenteriae WA1]
          Length = 278

 Score = 39.4 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 3   VFHNIEINQSLPNHLKGGVVAI----GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           +  NI+      +  K   +A+    G    +H GH  ++++A K  N   I ++S   +
Sbjct: 5   ILKNIKSAYKFISDNKDKTIALIPTMG---ALHEGHAALIKKAKKECN---IVIVSIFLN 58

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           P    +              +K+L ++    L    F         + +   + +E
Sbjct: 59  PLQFTKVEDIEKYPEDLDKDKKLLSELQVDVL----FLPSVEEMIPDDYAMHINIE 110


>gi|241113081|ref|YP_002972916.1| pantoate/beta-alanine ligase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861289|gb|ACS58955.1| pantoate/beta-alanine ligase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 309

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 41/200 (20%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF +I+  +   + LK      G V  +G    +H GH  ++ +A    +   I V+S
Sbjct: 1   MRVFSSIDELRHTLDALKRQGRTVGLVPTMGY---LHAGHMELVSRARAEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +            +L + G + L    F+    +      +  V V
Sbjct: 55  IFVNPLQ-FGPAEDLSRYPRDLERDAAMLRQAGVNFL----FSPGVEDMYPRPMLAVVDV 109

Query: 114 EWL--------------EVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYG--FH 150
             L               V TV+             FG+       I+++  +       
Sbjct: 110 PDLGRALEGAVRPGHFAGVATVVCKLFNIVQPQTAYFGEKDYQQVVIIKRMVDDLALPVR 169

Query: 151 TVFIDELRNNKSQIVSSSNI 170
            + +  +R++    +SS N+
Sbjct: 170 VISVPTVRDSDGLALSSRNV 189


>gi|238750539|ref|ZP_04612039.1| Pantothenate synthetase [Yersinia rohdei ATCC 43380]
 gi|238711187|gb|EEQ03405.1| Pantothenate synthetase [Yersinia rohdei ATCC 43380]
          Length = 284

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 23 AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           +GN   +H GH  ++E+A   A+   I V+S   +P    +               + L
Sbjct: 29 TMGN---LHQGHMTLVEEAKAYAD---IVVVSIFVNPLQFERPDDLARYPRTLQEDCEKL 82

Query: 83 EKMGFSALI 91
           + G   + 
Sbjct: 83 TRQGVDLVF 91


>gi|163939456|ref|YP_001644340.1| pantoate--beta-alanine ligase [Bacillus weihenstephanensis KBAB4]
 gi|229485641|sp|A9VMF0|PANC_BACWK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|83316497|gb|ABC02424.1| PanC [Bacillus weihenstephanensis]
 gi|163861653|gb|ABY42712.1| pantoate--beta-alanine ligase [Bacillus weihenstephanensis KBAB4]
          Length = 282

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L         V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELHASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVTDFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+  +L +     A HL G     +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNVYLSLEER--EEAPHLYGSLCIAKERIEAGERNPEII 223


>gi|15923631|ref|NP_371165.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15926318|ref|NP_373851.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus N315]
 gi|21282332|ref|NP_645420.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49482869|ref|YP_040093.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49485513|ref|YP_042734.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57651482|ref|YP_185580.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160374|ref|YP_493331.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88194412|ref|YP_499205.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|148267100|ref|YP_001246043.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150393148|ref|YP_001315823.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|151220823|ref|YP_001331645.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156978969|ref|YP_001441228.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|161508903|ref|YP_001574562.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140858|ref|ZP_03565351.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|253315284|ref|ZP_04838497.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253731262|ref|ZP_04865427.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253732918|ref|ZP_04867083.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255005434|ref|ZP_05144035.2| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257424760|ref|ZP_05601187.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257427429|ref|ZP_05603828.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257430060|ref|ZP_05606444.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257432762|ref|ZP_05609122.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257435666|ref|ZP_05611714.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M876]
 gi|257795095|ref|ZP_05644074.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9781]
 gi|258418354|ref|ZP_05682619.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A9763]
 gi|258419970|ref|ZP_05682928.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9719]
 gi|258423291|ref|ZP_05686182.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9635]
 gi|258430844|ref|ZP_05688556.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A9299]
 gi|258441663|ref|ZP_05690935.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A8115]
 gi|258445901|ref|ZP_05694078.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A6300]
 gi|258449706|ref|ZP_05697808.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A6224]
 gi|258452850|ref|ZP_05700844.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A5948]
 gi|258454107|ref|ZP_05702079.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A5937]
 gi|262048385|ref|ZP_06021270.1| teichoic acid biosynthesis protein D [Staphylococcus aureus D30]
 gi|262051723|ref|ZP_06023941.1| teichoic acid biosynthesis protein D [Staphylococcus aureus
           930918-3]
 gi|269202262|ref|YP_003281531.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282894405|ref|ZP_06302634.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8117]
 gi|282903233|ref|ZP_06311124.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C160]
 gi|282905020|ref|ZP_06312878.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282907978|ref|ZP_06315812.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282910285|ref|ZP_06318089.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282913478|ref|ZP_06321267.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282915976|ref|ZP_06323741.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|282918431|ref|ZP_06326168.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282921931|ref|ZP_06329629.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9765]
 gi|282923396|ref|ZP_06331076.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C101]
 gi|282926503|ref|ZP_06334133.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A10102]
 gi|283769804|ref|ZP_06342696.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus H19]
 gi|283957441|ref|ZP_06374894.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|284023664|ref|ZP_06378062.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 132]
 gi|293500525|ref|ZP_06666376.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293509470|ref|ZP_06668181.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M809]
 gi|293524057|ref|ZP_06670744.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|294849311|ref|ZP_06790054.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9754]
 gi|295407420|ref|ZP_06817216.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8819]
 gi|295427184|ref|ZP_06819820.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296274706|ref|ZP_06857213.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297208634|ref|ZP_06925063.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297246542|ref|ZP_06930378.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8796]
 gi|297590467|ref|ZP_06949106.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300912726|ref|ZP_07130169.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304381747|ref|ZP_07364395.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|110590849|pdb|2B7L|A Chain A, Crystal Structure Of Ctp:glycerol-3-Phosphate
           Cytidylyltransferase From Staphylococcus Aureus
 gi|110590850|pdb|2B7L|B Chain B, Crystal Structure Of Ctp:glycerol-3-Phosphate
           Cytidylyltransferase From Staphylococcus Aureus
 gi|110590851|pdb|2B7L|C Chain C, Crystal Structure Of Ctp:glycerol-3-Phosphate
           Cytidylyltransferase From Staphylococcus Aureus
 gi|110590852|pdb|2B7L|D Chain D, Crystal Structure Of Ctp:glycerol-3-Phosphate
           Cytidylyltransferase From Staphylococcus Aureus
 gi|1913907|gb|AAB51063.1| TagD [Staphylococcus aureus]
 gi|13700532|dbj|BAB41829.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus N315]
 gi|14246410|dbj|BAB56803.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21203769|dbj|BAB94468.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49240998|emb|CAG39668.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49243956|emb|CAG42382.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57285668|gb|AAW37762.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126348|gb|ABD20862.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201970|gb|ABD29780.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|147740169|gb|ABQ48467.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945600|gb|ABR51536.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|150373623|dbj|BAF66883.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721104|dbj|BAF77521.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160367712|gb|ABX28683.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253725003|gb|EES93732.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253729098|gb|EES97827.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257272330|gb|EEV04453.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257275622|gb|EEV07095.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257279257|gb|EEV09858.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282177|gb|EEV12312.1| teichoic acid biosynthesis protein D [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284857|gb|EEV14976.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M876]
 gi|257789067|gb|EEV27407.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9781]
 gi|257839147|gb|EEV63626.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A9763]
 gi|257844053|gb|EEV68444.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9719]
 gi|257846352|gb|EEV70375.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9635]
 gi|257849516|gb|EEV73486.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A9299]
 gi|257852132|gb|EEV76059.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A8115]
 gi|257855477|gb|EEV78415.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A6300]
 gi|257857214|gb|EEV80113.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A6224]
 gi|257859361|gb|EEV82215.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A5948]
 gi|257863972|gb|EEV86728.1| teichoic acid biosynthesis protein D [Staphylococcus aureus A5937]
 gi|259160334|gb|EEW45360.1| teichoic acid biosynthesis protein D [Staphylococcus aureus
           930918-3]
 gi|259163473|gb|EEW48030.1| teichoic acid biosynthesis protein D [Staphylococcus aureus D30]
 gi|262074552|gb|ACY10525.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269940218|emb|CBI48595.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282314264|gb|EFB44654.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C101]
 gi|282317565|gb|EFB47937.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282320272|gb|EFB50617.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|282322510|gb|EFB52832.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282325677|gb|EFB55985.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282328223|gb|EFB58502.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282331845|gb|EFB61356.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282591396|gb|EFB96468.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A10102]
 gi|282593784|gb|EFB98775.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9765]
 gi|282596188|gb|EFC01149.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus C160]
 gi|282763118|gb|EFC03249.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8117]
 gi|283459951|gb|EFC07041.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus H19]
 gi|283469937|emb|CAQ49148.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ST398]
 gi|283790892|gb|EFC29707.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|285816341|gb|ADC36828.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           04-02981]
 gi|290921020|gb|EFD98081.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095530|gb|EFE25791.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467567|gb|EFF10082.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus M809]
 gi|294823843|gb|EFG40269.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A9754]
 gi|294967701|gb|EFG43734.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8819]
 gi|295128972|gb|EFG58602.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296886889|gb|EFH25793.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297176573|gb|EFH35837.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           A8796]
 gi|297576766|gb|EFH95481.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298693972|gb|ADI97194.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300886972|gb|EFK82174.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302750540|gb|ADL64717.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304339698|gb|EFM05644.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312438937|gb|ADQ78008.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|312829135|emb|CBX33977.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315128481|gb|EFT84488.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|315194011|gb|EFU24405.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315197612|gb|EFU27947.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140026|gb|EFW31887.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320141883|gb|EFW33711.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|323439396|gb|EGA97118.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           O11]
 gi|323442080|gb|EGA99714.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           O46]
 gi|329313364|gb|AEB87777.1| Glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724998|gb|EGG61496.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329729703|gb|EGG66104.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 21193]
 gi|329729845|gb|EGG66237.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 132

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 56/161 (34%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKHKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E+    ++  VE  +V   + G  +       G+ 
Sbjct: 58  MLESIRYVDLVI------------PEKGWGQKEDDVEKFDVDVFVMGHDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ + E           +   +++ +S++ I+  L    
Sbjct: 100 DFLKDKCEV----------IYLKRTEGISTTKIKQELYGKD 130


>gi|330720300|gb|EGG98652.1| ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [gamma proteobacterium IMCC2047]
          Length = 476

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 26/171 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V   +        H +  V   G FD IH GH   L +A  + +   + V +      
Sbjct: 323 MSVEQLVMAIDDARAHGEKVVFTNGCFDIIHAGHIGYLAEAGALGDRLIVGVNTDE---- 378

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
           ++ +   P   ++P   +  +L  +     ++        A  +  + +     E L+  
Sbjct: 379 SVARLKGPGRPINPVDRRMTVLAGLEAVDWVVP------FAEDTPRELL-----EQLQPD 427

Query: 120 TVITGTKFRF----GKD----RAGDRGILQKRGEKYGFHTVFIDELRNNKS 162
            ++ G  +      G D    R G+   L    E     T  ++++++N  
Sbjct: 428 VLVKGGDYSLDEIVGADLVLARGGEVKRLSFLDEVS--TTAIVEKIKDNDD 476


>gi|317122466|ref|YP_004102469.1| sulfate adenylyltransferase [Thermaerobacter marianensis DSM 12885]
 gi|315592446|gb|ADU51742.1| sulfate adenylyltransferase [Thermaerobacter marianensis DSM 12885]
          Length = 623

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 50/176 (28%), Gaps = 36/176 (20%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ--EKILEKM-G 86
           +H  H  + + A+++ +   +       HP  ++  +      +P  ++   ++L     
Sbjct: 431 VHRAHEYLQKVALEMVDGLLL-------HP--LVGPTKADDVPAPVRLRCYLELLRHYYP 481

Query: 87  FSALIRYKFTLETA-NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGE 145
              ++   F          E     +  +       I G     G          Q+  +
Sbjct: 482 AQRVLFAVFPAAMRYAGPREALFHALCRKNYGCTHFIVGRDHA-GVGHYYGAYDAQRIFD 540

Query: 146 KY----------------------GFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           ++                      G  T        +   I+S + +R  L +G +
Sbjct: 541 RFAPEELAVTPLKFEQAFYCRRCSGMATTKTCPHGEDDRVILSGTRVRAMLAEGQL 596


>gi|325678462|ref|ZP_08158078.1| nicotinate-nucleotide adenylyltransferase [Ruminococcus albus 8]
 gi|324109830|gb|EGC04030.1| nicotinate-nucleotide adenylyltransferase [Ruminococcus albus 8]
          Length = 204

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 36/179 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI--L 82
           G FD IH GH  +L+ A K      + VL     P  I         L     +  +  L
Sbjct: 8   GTFDPIHKGHVRLLKMAKKHCGLDRVIVL-----PDRI-PPHKQAKDLVSGEDRLAMCRL 61

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV--ITGTKFRFGKDR------- 133
              G   +    F ++    S      + + +      +  I G+       +       
Sbjct: 62  AVSGLDGVEVSDFEIKREGLSYSVITLREMHKLYPDDRLWFIMGSDMLTSFHKWYCYEEI 121

Query: 134 ------------AGDRGILQKRGEKY---GFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
                        GD   L++  E+    G     +       +  +SSS +R  L  G
Sbjct: 122 LTLAGIICMTRYDGDDAELEEAAERLRAVGGEVKLVP----VGALEISSSQVREMLASG 176


>gi|253578728|ref|ZP_04855999.1| pantoate-beta-alanine ligase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849671|gb|EES77630.1| pantoate-beta-alanine ligase [Ruminococcus sp. 5_1_39BFAA]
          Length = 279

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 57/191 (29%), Gaps = 30/191 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIG-----NFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M V   +E  +      K     IG      F  +H GH  ++++  +  +   I V+S 
Sbjct: 1   MQVTKTVEETRKQIKAWKKEGKTIGLVPTMGF--LHEGHASLIKKCREQND---IVVVSD 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +              K+ E +G   LI      E  +          L E 
Sbjct: 56  FVNPTQFGPTEDLEAYPRDFERDSKLCESLGTD-LIFCPEPSEMYHDPHAFVSIDTLSET 114

Query: 116 LEVK-----------------TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DE 156
           L  K                  ++   +  FG+  A    I++K  +   F    +    
Sbjct: 115 LCGKTRPIHFKGVCTVVTKLFHIVAPDRAYFGQKDAQQLAIIRKMVQDLNFDIEIVGCPI 174

Query: 157 LRNNKSQIVSS 167
           +R       SS
Sbjct: 175 VREEDGLAKSS 185


>gi|225870015|ref|YP_002745962.1| phosphopantetheine adenylyltransferase [Streptococcus equi subsp.
           equi 4047]
 gi|254764171|sp|C0MBZ1|COAD_STRE4 RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|225699419|emb|CAW92897.1| phosphopantetheine adenylyltransferase [Streptococcus equi subsp.
           equi 4047]
          Length = 166

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 33/157 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++++A  +  +  + + + NP+ ++               ++ ++L +
Sbjct: 10  GSFDPVTNGHMDMIKRASHLFEHVYVGIFN-NPNKQSFF----------TFELRAQMLSE 58

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDRAGDRG 138
               A+            SAE  +   L   L V  +I G        +  G        
Sbjct: 59  ----AVCALP---NVTVVSAEHGLAVDLARELSVTHLIRGLRNTADFDYEIG-------- 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L+    +       I  +  +  Q VSSS IR  + 
Sbjct: 104 -LEYFNHRLAPDIETIYLMATHDLQPVSSSRIRELIA 139


>gi|224498503|ref|ZP_03666852.1| hypothetical protein LmonF1_01934 [Listeria monocytogenes Finland
           1988]
          Length = 390

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH L L +A ++   +  I V+S      + +Q   P   + P   + K+    G  
Sbjct: 13  FHNGHKLHLNKARELTQADVVIAVMS-----GSFVQRGEPA--IIPKWERAKMALSAGVD 65

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEWLEVKTVITG------TKFRFGKDR 133
            ++     F  + A   AE+ ++ +  + + + T+  G        F     +
Sbjct: 66  MVVELPVSFATQHATIFAEEAVRIL--DAIHIDTLFFGSEHGVAEDFTIAAKK 116


>gi|152988346|ref|YP_001351050.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas aeruginosa PA7]
 gi|167017174|sp|A6VDB5|HLDE_PSEA7 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|150963504|gb|ABR85529.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa PA7]
          Length = 474

 Score = 39.4 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   + V        ++ +      
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGV----NDDASVTRLKGAGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +++V         ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVV------SFAEDTPERLLEQV-----RPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G ++        +  + YG     +  + N+     S++ I   + + 
Sbjct: 435 GVEQVVGA----QIVKAYGGEVRVLGLVENS-----STTAIVEKIRQK 473


>gi|208434767|ref|YP_002266433.1| ADP-heptose synthase [Helicobacter pylori G27]
 gi|226702247|sp|B5Z7L8|HLDE_HELPG RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|208432696|gb|ACI27567.1| ADP-heptose synthase [Helicobacter pylori G27]
          Length = 463

 Score = 39.0 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 50/132 (37%), Gaps = 28/132 (21%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L ++ +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLEHNQQKIVFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL--EV 118
            ++       +     +  +L  +     ++ ++        +  Q IQ +  + L    
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEED------TPIQLIQALKPDILVKGA 423

Query: 119 KTV---ITGTKF 127
             +   + G++F
Sbjct: 424 DYLNKEVIGSEF 435


>gi|313683375|ref|YP_004061113.1| pantothenate synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313156235|gb|ADR34913.1| pantothenate synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 273

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 30/199 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H+GH  +++ A      +   V+S   +P   +                KI    G   
Sbjct: 30  LHIGHRTLIDAAR---KGNDTVVVSIFVNPTQFLPGEDLSKYPRREEADFKICSLSGIDI 86

Query: 90  LIRYK-------------------FTLETANYSAE-QFIQKVLVEWLEVKTVITGTKFRF 129
           L                       F LE A+       +  V+++      ++  T+  F
Sbjct: 87  LFYPDVNAMYGDDEVRITAPDVRGFILEGASRPGHFDGVLTVVMKLFN---IVRPTRAYF 143

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
           GK  A    ++ +    +      +    +R +    +SS N+   L+      A  L  
Sbjct: 144 GKKDAQQLAMIIQMVNNFFMDVEIVPMETVRESDGLALSSRNV--YLSPSERQEALKLSA 201

Query: 188 YRFTIESDVIHGEKIGRTL 206
              +    V+ G      +
Sbjct: 202 ALKSATKMVMQGNLSSSDI 220


>gi|294788217|ref|ZP_06753460.1| pantoate--beta-alanine ligase [Simonsiella muelleri ATCC 29453]
 gi|294483648|gb|EFG31332.1| pantoate--beta-alanine ligase [Simonsiella muelleri ATCC 29453]
          Length = 277

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 8/93 (8%)

Query: 1  MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
          M + H+I+  +   N++        +GN   +H GH  ++++A   A+N    V+S   +
Sbjct: 1  MRMIHSIQEYKEWRNNVSSVAFVPTMGN---LHEGHLALVQRAKAEADN---VVVSIFVN 54

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
               Q                 L   G + L 
Sbjct: 55 RLQFGQGEDFDKYPRTLEQDAAKLRDAGVAVLF 87


>gi|153871707|ref|ZP_02000812.1| Transcriptional regulator nadR [Beggiatoa sp. PS]
 gi|152071830|gb|EDN69191.1| Transcriptional regulator nadR [Beggiatoa sp. PS]
          Length = 363

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 12/64 (18%)

Query: 22 VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
          + +G F  +H GH L++E A+   +   +TV+ ++          +P  T  P +++   
Sbjct: 20 LTLGKFAPLHKGHQLVIETALAEMDE--VTVIIYD----------APETTRIPLNVRTNW 67

Query: 82 LEKM 85
          L K+
Sbjct: 68 LRKL 71


>gi|15612321|ref|NP_223974.1| hypothetical protein jhp1256 [Helicobacter pylori J99]
 gi|10720117|sp|Q9ZJP8|NADD_HELPJ RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|4155870|gb|AAD06842.1| putative [Helicobacter pylori J99]
          Length = 174

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++     + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIEQTLELLPFVQLIVL-----P-AYQNPFKKPCFLDAKTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 72  LK--GMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGRYHPLKGIDAPISSSAIRASL 172


>gi|21674465|ref|NP_662530.1| pantoate-beta-alanine ligase [Chlorobium tepidum TLS]
 gi|25090869|sp|Q8KBY5|PANC_CHLTE RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|21647653|gb|AAM72872.1| pantoate--beta-alanine ligase [Chlorobium tepidum TLS]
          Length = 284

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 12/97 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M + ++    Q +   L+      G V+ +G    +H GH  +++ A     ++   +++
Sbjct: 1  MQIINDPAEMQKIAEKLRLQHQYIGVVMTMG---ALHEGHLSLVKLAKA---HAGTVIMT 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
             +P     +        P      +    G   L 
Sbjct: 55 IFVNPTQFGPNEDFYRYPRPFEQDAALARSAGVDYLF 91


>gi|291004976|ref|ZP_06562949.1| hypothetical protein SeryN2_10682 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 724

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G F   H GH  ++E A +  +   + V+S   +P     S    F   P   +
Sbjct: 25  GFVPTMGAF---HAGHESLMEAARRECD---VVVVSLFVNPAQF--SDDGGFETYPRDER 76

Query: 79  --EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
               I  + G   L    F  ETA    + F   V V  
Sbjct: 77  RDAAIAARQGVDVL----FAPETAEIYPDGFATTVSVGG 111


>gi|258645634|ref|ZP_05733103.1| [citrate (pro-3S)-lyase] ligase [Dialister invisus DSM 15470]
 gi|260402995|gb|EEW96542.1| [citrate (pro-3S)-lyase] ligase [Dialister invisus DSM 15470]
          Length = 362

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 34/174 (19%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL- 90
           LGH  ++E A+   +     V+ F       I   S  F+L    I++ + +  G S + 
Sbjct: 158 LGHRSLVEYAVNNCDE----VIIFAVQEDRSIFPFSDRFSL----IKQGVKDMKGVSVIS 209

Query: 91  -------------IRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK----FRFGK 131
                           K T E A  +          +   L +     G +         
Sbjct: 210 GGNYIISNATFPTYFIKGTDELAAQTKLDATVFATRIAPALNITVRFVGEEPTDKTTLAY 269

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +RA     +++     G     I        Q+VS+S +R AL++        +
Sbjct: 270 NRA-----MREVFANNGIELKVIPR-EQKGHQVVSASTVRKALSEDDWETVYRM 317


>gi|302553190|ref|ZP_07305532.1| pantoate-beta-alanine ligase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470808|gb|EFL33901.1| pantoate-beta-alanine ligase [Streptomyces viridochromogenes DSM
           40736]
          Length = 330

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 23/167 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A  +A      V++   +P                    K
Sbjct: 24  VMTMG---ALHEGHATLIRTARALAGPDGEVVVTVFVNPLQFGAGEDLDRYPRTLDADLK 80

Query: 81  ILEKMGFSALI------RYKFTLETANYSAEQFIQKVL-----VEWLEVKTVITG----- 124
           + E+ G   +        Y         +A    +++        +  V TV+       
Sbjct: 81  LAEESGADVVFAPGVDEVYPGGEPQVRITAGPMGERLEGSSRPGHFDGVLTVVAKLLHLT 140

Query: 125 --TKFRFGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
                 +G+  A    ++++      F      +  +R      +SS
Sbjct: 141 RPDAALYGQKDAQQLALIRRMVRDLNFGVEIVGVPTVREEDGLALSS 187


>gi|237809046|ref|YP_002893486.1| pantoate--beta-alanine ligase [Tolumonas auensis DSM 9187]
 gi|259515867|sp|C4L930|PANC_TOLAT RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|237501307|gb|ACQ93900.1| pantoate/beta-alanine ligase [Tolumonas auensis DSM 9187]
          Length = 288

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 46/238 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++ +A    N++ + ++S   +P    ++   +      S    +L
Sbjct: 29  TMGN---LHNGHLTLVREAK---NHADVVIVSIFVNPMQFDRAEDLVNYPRTLSDDCALL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG-----------------T 125
           E+ G +A+    FT   A    +    +  VE  E+  ++ G                  
Sbjct: 83  EQEGVTAV----FTPTPAIMYPQGLETQTFVEVPEISYLLEGAMRPGHFRGVSTVVTKLF 138

Query: 126 KF------RFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSN----IRTA 173
                    FG+       +++K           + +  +R      +SS N        
Sbjct: 139 NIVQPDVACFGQKDYQQLALIRKMVRDMTMPIEIIGVPTVRAEDGLALSSRNGYLTAEER 198

Query: 174 LTKGHVLNAAHLLGYRFTIESDVIH-----GEKIGRTLGFPT--ANMQLSPDILLKEG 224
           L    +      +G +       I            + GF T   ++  +  +L   G
Sbjct: 199 LIAPTLAKVMGWIGEQLPARQTAIPALITEAADKLNSAGFRTDAIDIVDAETLLPLSG 256


>gi|52080750|ref|YP_079541.1| pantoate--beta-alanine ligase [Bacillus licheniformis ATCC 14580]
 gi|52786121|ref|YP_091950.1| pantoate--beta-alanine ligase [Bacillus licheniformis ATCC 14580]
 gi|319645292|ref|ZP_07999525.1| pantothenate synthetase [Bacillus sp. BT1B_CT2]
 gi|78099036|sp|Q65I57|PANC_BACLD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|52003961|gb|AAU23903.1| pantothenate synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348623|gb|AAU41257.1| PanC [Bacillus licheniformis ATCC 14580]
 gi|317393101|gb|EFV73895.1| pantothenate synthetase [Bacillus sp. BT1B_CT2]
          Length = 288

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M   +  +  Q+L  + +     IG      F  +H GH  ++E+A K  +   I V+S 
Sbjct: 1   MIQIYTAKDIQNLTKNYRKEGKTIGFVPTMGF--LHEGHMSLVEKARKDND---IVVMSI 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P                    ++    G   L    FT E      ++      V+ 
Sbjct: 56  FVNPMQFGPGEDYEAYPRDIERDRQLAAGSGVDVL----FTPEPEEMYGQEPTVTASVKK 111

Query: 116 LEVKTVITGTKFRFGKDRAGDRG 138
                    T    G+ R G   
Sbjct: 112 R--------TDVLCGRSREGHFD 126


>gi|121999040|ref|YP_001003827.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Halorhodospira halophila SL1]
 gi|150383469|sp|A1WZB3|HLDE_HALHL RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|121590445|gb|ABM63025.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Halorhodospira
           halophila SL1]
          Length = 477

 Score = 39.0 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 30/115 (26%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V+  G FD +H GH   L++A +      + V              + +  L       +
Sbjct: 345 VMTNGCFDLLHAGHVDYLQRARRRGERLVVAV-----------NDDASVARLKGAERPVT 393

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P + +  +L  +     ++   F+ +    +  + I+ VL + L     + G  +
Sbjct: 394 PLAQRMAVLAALDTVDWVV--PFSED----TPARLIEAVLPDRL-----VKGGDY 437


>gi|297737774|emb|CBI26975.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score = 39.0 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 31/180 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+F+ +H GH  +L+ A  I   +  P     F     + + +  P  T+S    + K  
Sbjct: 219 GSFNPLHDGHLKLLDVATSICGRDGYP----CFE---ISAVNADKPPLTVSQIKERVKQF 271

Query: 83  EKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWLEVKTVITGTKFRF--------- 129
           E++G + +I    +  + A     SA       +V  +  K    G+  +          
Sbjct: 272 ERVGKTVIISTQPYFYKKAELFPGSAFVIGADTVVRLINPKY-YDGSNQKMLEILGGCKR 330

Query: 130 --------GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
                   G++  G   +L+          +FI          +SS+ IR       + +
Sbjct: 331 TGCIFLVGGRNIDGVFKVLEDLEIPEELKDMFIPIPAERFRMDISSTEIRQKAENIELSD 390


>gi|225424077|ref|XP_002283677.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 391

 Score = 39.0 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 31/180 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIA--NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+F+ +H GH  +L+ A  I   +  P     F     + + +  P  T+S    + K  
Sbjct: 220 GSFNPLHDGHLKLLDVATSICGRDGYP----CFE---ISAVNADKPPLTVSQIKERVKQF 272

Query: 83  EKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWLEVKTVITGTKFRF--------- 129
           E++G + +I    +  + A     SA       +V  +  K    G+  +          
Sbjct: 273 ERVGKTVIISTQPYFYKKAELFPGSAFVIGADTVVRLINPKY-YDGSNQKMLEILGGCKR 331

Query: 130 --------GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
                   G++  G   +L+          +FI          +SS+ IR       + +
Sbjct: 332 TGCIFLVGGRNIDGVFKVLEDLEIPEELKDMFIPIPAERFRMDISSTEIRQKAENIELSD 391


>gi|33240771|ref|NP_875713.1| ADP-heptose synthase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33238300|gb|AAQ00366.1| ADP-heptose synthase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 504

 Score = 39.0 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 21/110 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G VV  G+F+ +H GH   L+ A ++     + +       +  +       T      +
Sbjct: 22  GSVVGYGHFNSVHTGHIRYLKHAKELGQKFVVAI-------QKHLSGD--PRTHFSQLER 72

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            + + ++    A+I                  K  ++ L  K ++ G ++
Sbjct: 73  AEGVAQLAIADAVILLPDNN-----------LKKCLQKLNPKYLVLGKEY 111


>gi|327469053|gb|EGF14525.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK330]
          Length = 164

 Score = 39.0 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMTKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +            +++  +   +   L  K  + G +     D   +        
Sbjct: 61  QHLDNVEVI---------TSQNELAVTVARRLGAKVFVRGLRNSQDLDYEANMNF---FN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           ++       I  L     Q +SSS IR  + 
Sbjct: 109 QELAGEIETIFLLSKPDYQHISSSRIRELIA 139


>gi|297539191|ref|YP_003674960.1| bifunctional protein RfaE [Methylotenera sp. 301]
 gi|297258538|gb|ADI30383.1| rfaE bifunctional protein [Methylotenera sp. 301]
          Length = 490

 Score = 39.0 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   LE A K  +   + + + +     +   + P+        + +
Sbjct: 360 VFTNGCFDLLHAGHVTYLEAAKKTGDKLILGLNT-DRSVSALKGPTRPVVH---EGDRAR 415

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +    A+I   F  +    +  Q I     + +    ++ G  + 
Sbjct: 416 VLAALASVDAVIL--FDED----TPLQLI-----DAIRPDVIVKGDDYT 453


>gi|239947258|ref|ZP_04699011.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239921534|gb|EER21558.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 128

 Score = 39.0 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +  + NI +N++ P + +  V+  G FD +H GH   +E   K   +    +++  P   
Sbjct: 32  IEYYENISLNKNCPINSE-IVLVGGCFDLLHYGH---IEFLRKAKKHGKYLIVALEPDET 87

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYK 94
            I         +     + KIL        ++   
Sbjct: 88  IIKYKKRQP--IHNQLQRAKILSSFTFVDKVLILP 120


>gi|99078415|ref|YP_611673.1| pantoate--beta-alanine ligase [Ruegeria sp. TM1040]
 gi|123252722|sp|Q1GLQ5|PANC_SILST RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|99035553|gb|ABF62411.1| pantothenate synthetase [Ruegeria sp. TM1040]
          Length = 280

 Score = 39.0 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 12/96 (12%)

Query: 3  VFHNIEINQSLPNHL------KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
          +   ++  ++L           G V  +G    +H GH  ++E A    ++    V++  
Sbjct: 5  ILRRLDDLRALRRDWMKKGDTLGLVPTMG---ALHAGHLSLVEAAKAACDH---VVVTIF 58

Query: 57 PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
           +P+                   + L   G  A+  
Sbjct: 59 VNPKQFNSPEDLANYPRTEHEDAQKLAPYGVDAIYV 94


>gi|45201418|ref|NP_986988.1| AGR322Wp [Ashbya gossypii ATCC 10895]
 gi|74691711|sp|Q74ZF6|MET3_ASHGO RecName: Full=Sulfate adenylyltransferase; AltName:
           Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate
           transferase; Short=SAT
 gi|44986352|gb|AAS54812.1| AGR322Wp [Ashbya gossypii ATCC 10895]
          Length = 500

 Score = 39.0 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 34/175 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +  +A K  N   +       HP   +     I   +   + ++I+++   G 
Sbjct: 198 MHRAHRELTIRAAKEHNAKVLL------HPVVGLTKPGDIDYHTRIKVYKEIVKRYPEGI 251

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAGD--------RG 138
           + L      +  A    E     ++ +       I G      G +  GD        + 
Sbjct: 252 AQLALLPLAMRMAG-DREAVWHAIIRKNYGATHFIVGRDHAGPGTNSKGDDFYGPYDAQV 310

Query: 139 ILQKRGEKYGFHTV---------------FIDELRNN-KSQIVSSSNIRTALTKG 177
           +++    + G   V                +DE+  + K+  +S + +R  L +G
Sbjct: 311 LVESYKNELGIEVVPFKLITYLPDKDIYLPVDEIDGSVKTLTISGTELRKRLREG 365


>gi|302332351|gb|ADL22544.1| glycerol-3-phosphate cytidylyltransferase [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 132

 Score = 39.0 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 56/161 (34%), Gaps = 37/161 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   + + +                +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDE------FNQIKHKKSYYDYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +LE +     +I             E+    ++  V+  +V   + G  +       G+ 
Sbjct: 58  MLESIRYVDLVI------------PEKGWGQKEDDVKKFDVDVFVMGHDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             L+ + E           +   +++ +S++ I+  L    
Sbjct: 100 DFLKDKCEV----------IYLKRTEGISTTKIKQELYGKD 130


>gi|146284137|ref|YP_001174290.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas stutzeri A1501]
 gi|167017177|sp|A4VR47|HLDE_PSEU5 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|145572342|gb|ABP81448.1| LPS biosynthesis protein RfaE [Pseudomonas stutzeri A1501]
          Length = 473

 Score = 39.0 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 33/179 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V   + + +      +  V   G FD +H GH   LEQA    +   +  ++ +    
Sbjct: 322 MTVEQLLTVVEDARAQGEKIVFTNGCFDILHAGHVTYLEQARAQGDRL-VVAVNDDGSVS 380

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            +     P   ++    +  +L  +     ++        A  + E  + +V        
Sbjct: 381 RLKGPGRP---INSVDRRMAVLAGLEAVDWVVC------FAEDTPENLLAQV-----RPD 426

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-----NIRTA 173
            ++ G  +  G D+     +++  G       V +  L  N     SS+      IR A
Sbjct: 427 VLVKGGDY--GVDQVVGADLVKAYG-----GVVKVLGLVEN-----SSTTAIVEKIRKA 473


>gi|219849779|ref|YP_002464212.1| pantoate--beta-alanine ligase [Chloroflexus aggregans DSM 9485]
 gi|254778218|sp|B8G643|PANC_CHLAD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|219544038|gb|ACL25776.1| pantoate/beta-alanine ligase [Chloroflexus aggregans DSM 9485]
          Length = 277

 Score = 39.0 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 8/94 (8%)

Query: 1  MHVFHNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
          M V H I   +         G V  +G    +H GH  ++E+A       P   +S   +
Sbjct: 1  MQVVHTIAEARRARAAFDELGFVPTMGY---LHQGHLALVERARAEC---PAVAVSIFVN 54

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          P                +    +LE  G   +  
Sbjct: 55 PTQFGPHEDYARYPRDTARDLALLEAAGVDLVFI 88


>gi|116668925|ref|YP_829858.1| cytidyltransferase-like protein [Arthrobacter sp. FB24]
 gi|116609034|gb|ABK01758.1| cytidyltransferase-related domain protein [Arthrobacter sp. FB24]
          Length = 461

 Score = 39.0 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   L  A  + +   I  L+ +   R I     PI        + +
Sbjct: 329 VATGGCFDLLHAGHTRALAAARSLGD-CLIVCLNSDESVRRIKGPGRPIL---NQEDRAE 384

Query: 81  ILEKMG-FSALIRYKFTLE-----TANYSAEQFIQ--KVLVEWLEVKTVI 122
           +L  +    A++   F  +      A    + +++     V  L    ++
Sbjct: 385 LLLALEFVDAVMV--FDEDTPEACLAALQPDLWVKGGDYDVTQLPETALV 432


>gi|298373270|ref|ZP_06983259.1| glycerol-3-phosphate cytidylyltransferase [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298274322|gb|EFI15874.1| glycerol-3-phosphate cytidylyltransferase [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 149

 Score = 39.0 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 56/160 (35%), Gaps = 31/160 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD  H  H  ++  A  + +   + V +       ++ S      +     + +
Sbjct: 8   VYTSGTFDLFHYNHLRMINYARALGDILIVGVST-----DELVCSYKAKPAI-RFEERMQ 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I+E +    L+  + TL+              V+ L +   + G  + FGK        L
Sbjct: 62  IIEALKTPDLVIPQHTLD----------HTETVKKLNIDAFVVGDDW-FGK-----YDYL 105

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVL 180
           ++ G         ++         +S+SN++ ++   +  
Sbjct: 106 KELG---------VEVFYFPYGMGISTSNLKKSIHDSYAE 136


>gi|238650905|ref|YP_002916761.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia peacockii
           str. Rustic]
 gi|238625003|gb|ACR47709.1| glycerol-3-phosphate cytidyltransferase TagD [Rickettsia peacockii
           str. Rustic]
          Length = 137

 Score = 39.0 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           +  + NI +N++ P + +  V+  G FD +H GH   +E   K   +  I  L   P  +
Sbjct: 15  IEYYENISLNKNCPINSE-IVLVGGCFDLLHYGH---IEFLRKAKKHGKIVAL--EPD-K 67

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLET 99
           TIIQ       +     Q KIL        ++      + 
Sbjct: 68  TIIQYKKRQP-IHNQLQQAKILSSFTFVDKVLILPKLKDF 106


>gi|289435250|ref|YP_003465122.1| pantoate--beta-alanine ligase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171494|emb|CBH28038.1| pantoate--beta-alanine ligase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 285

 Score = 39.0 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 37/198 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +  N +         K     IG      F  +H GH  ++  A K  +     V+S 
Sbjct: 1   MQIIRNRQTLIDAITEQKKSNKTIGFVPTMGF--LHEGHMTLVSHARKEND---CVVMSV 55

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P     +          +   K  E  G   L    F          +   K+ VE 
Sbjct: 56  FVNPTQFGPNEDFDAYPRDEAHDAKFAEAGGVDIL----FIPTVEEMYPAELATKLHVEK 111

Query: 116 ---------------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHT--V 152
                                 ++  +++     FG+  A    ++    + Y F     
Sbjct: 112 RVSVLDGADREGHFDGVVTVLTKLFHLVSPDNAYFGQKDAQQVAVVSGLVDDYFFPVNLR 171

Query: 153 FIDELRNNKSQIVSSSNI 170
            I  +R       SS N+
Sbjct: 172 VIATVREQDGLAKSSRNV 189


>gi|322379023|ref|ZP_08053426.1| Pantothenate synthetase [Helicobacter suis HS1]
 gi|322380789|ref|ZP_08054895.1| pantothenate synthase [Helicobacter suis HS5]
 gi|321146793|gb|EFX41587.1| pantothenate synthase [Helicobacter suis HS5]
 gi|321148515|gb|EFX43012.1| Pantothenate synthetase [Helicobacter suis HS1]
          Length = 270

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 44/232 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++++A        I ++S   +P                    ++ E +G SA
Sbjct: 27  LHSGHASLIQKARAQNK---IVIVSIFVNPTQFGPHEDFNQYPRTLQADLELCEDLGVSA 83

Query: 90  LI------RYKFTLET------------ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +        Y F  +             A+     F   + V  L++  ++   +  FG+
Sbjct: 84  VFAPEPTEIYPFKQKITLQPPPSLLGFEADARPHHFEGVLQV-VLKLFNLVRPKRAYFGR 142

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDE--LRNNKSQIVSSS--------------------N 169
             A    I+Q            +    +R++    +SS                      
Sbjct: 143 KDAQQLLIIQHMVADLFLEIEIVPCEIVRDSDGLALSSRNVYLSQEERQSALKLPQALMR 202

Query: 170 IRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
           I+ A++ G   +A  +      +E   +H   I      P   ++ +  ++L
Sbjct: 203 IKKAISAGQNHSANLIQLGLEVLEGLKVHYLSICDHYLTPLDQIKPTKTLIL 254


>gi|309390164|gb|ADO78044.1| cytidyltransferase-related domain protein [Halanaerobium praevalens
           DSM 2228]
          Length = 161

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 35/166 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFTLSPPSIQ 78
           V   G FD +H+GH   L++A  + +   + V        ++  ++     F   P S +
Sbjct: 26  VFTNGCFDILHVGHIRYLKKAAALGDKLILAV----NSDSSVKSLKGEMRPFV--PESER 79

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            ++L  +     L+        A   A + I+++     E +  + G  +R         
Sbjct: 80  LEMLAALEMVDYLV------SFAEIDATKLIREI-----EPQIYVKGGDYR--------I 120

Query: 138 GILQKRGE--KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             L +      YG   V + E++       S++N+   + +     
Sbjct: 121 EDLPEAETVYNYGGKIVLVTEVKGK-----STTNLIQKIKQSKNEK 161


>gi|257057506|ref|YP_003135338.1| pantoate--beta-alanine ligase [Saccharomonospora viridis DSM 43017]
 gi|256587378|gb|ACU98511.1| pantothenate synthetase [Saccharomonospora viridis DSM 43017]
          Length = 302

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  +L +A ++ N   +   S   +P    +               K+LE+ G   
Sbjct: 47  LHAGHQELLRRAKRLPN--TVVAASIFVNPLQFGEGEDFDAYPRTLDADLKVLEEAGVE- 103

Query: 90  LIRYKFTLETANYSAEQF 107
                FT E  +  A+  
Sbjct: 104 ---IAFTPEAEDLYAQDA 118


>gi|224538461|ref|ZP_03679000.1| hypothetical protein BACCELL_03355 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519929|gb|EEF89034.1| hypothetical protein BACCELL_03355 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 281

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 39/207 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + L+      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIVHTIKDLQAGLSALRAQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P      +              +LE  G + +    F    A    E   ++    
Sbjct: 58  ---NPTQFNDKNDLEKYPRTLDADCALLEACGAAFV----FAPSVAEMYPEPDTRQFSYA 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V  ++             FG+       I+++   +  +    
Sbjct: 111 PLDTVMEGAFRPGHFNGVCQIVSKLFDAVKPDRAYFGEKDFQQLAIIREMVRQMNYSLEI 170

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGH 178
           +    +R      +SS N R ++ +  
Sbjct: 171 VGCPIIREEDGLALSSRNARLSVEERK 197


>gi|224024364|ref|ZP_03642730.1| hypothetical protein BACCOPRO_01088 [Bacteroides coprophilus DSM
           18228]
 gi|224017586|gb|EEF75598.1| hypothetical protein BACCOPRO_01088 [Bacteroides coprophilus DSM
           18228]
          Length = 299

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 39/200 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   I   ++  + L+      G V  +G    +H GH  ++++A+   +   + V+S
Sbjct: 19  MKLIQTINELRAELDVLRREGKTIGLVPTMG---ALHAGHASLVKRAVAEND---VVVVS 72

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +          K+LE  G           +     T + +      
Sbjct: 73  DFVNPTQFNDKNDLLKYPRTLDADCKLLEACGAAFVFAPSVEEIYPEPDTRQFS----YA 128

Query: 107 FIQKVLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            +  V+                     ++  T+  FG+       I+++   KY F+   
Sbjct: 129 PLDTVMEGKYRPGHFNGVCQIVSKLFLIVEPTRAYFGEKDFQQLAIIREMVRKYPFNLEI 188

Query: 154 I--DELRNNKSQIVSSSNIR 171
           +    +R +    +SS N R
Sbjct: 189 VGCPIVRESDGLALSSRNAR 208


>gi|205355623|ref|ZP_03222393.1| possible sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346400|gb|EDZ33033.1| possible sulfate adenylyltransferase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 386

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 18/171 (10%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           E  Q + N+L    +   + +FD +H  H  +    I  A+     V+ F         +
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD----LVVIF---LVESFDA 189

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   F L    +++ I   +    +  +      +  A+ +    ++ ++ + L    ++
Sbjct: 190 NGFEFELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIAKSLGCTKLV 247

Query: 123 TGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
            G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 248 VGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|253701988|ref|YP_003023177.1| rfaE bifunctional protein [Geobacter sp. M21]
 gi|251776838|gb|ACT19419.1| rfaE bifunctional protein [Geobacter sp. M21]
          Length = 487

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 29/162 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPS 76
           K  V   G FD +H+GH   L++A  + +   I V+  N       ++       L   +
Sbjct: 352 KKVVFTNGCFDLLHVGHVKYLQKARGLGD---ILVVGLNTDASVRRLKGEKRP--LIEET 406

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  IL  +     ++   F  +             ++E L    ++ G  +       G
Sbjct: 407 ERAHILAALDCIDYVVL--FDED---------TPLNVIETLTPDILVKGGDYSI----EG 451

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             G  ++  E +G     I  +        S+S I   +   
Sbjct: 452 VVG--REVVEAHGGRVELIQFV-----DGRSTSRIIEKILSS 486


>gi|59889772|emb|CAH19127.1| Putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli]
 gi|284920036|emb|CBG33092.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
           coli 042]
          Length = 134

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 30/156 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +             +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--HQDDR 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             I+  +   A +   F  E+    AE       +       ++ G  +      AG   
Sbjct: 57  MAIIAGL---ACVEGVFLEESLEQKAE------YLRGYGADILVMGDDW------AGKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                 E   F           ++  VS++ I   +
Sbjct: 102 DFSCVCEVVYF----------PRTPSVSTTEIIEVI 127


>gi|313683265|ref|YP_004061003.1| d-alpha,beta-d-heptose 7-phosphate 1-kinase; d-beta-d-heptose
           1-phosphate adenylyltransferase [Sulfuricurvum kujiense
           DSM 16994]
 gi|313156125|gb|ADR34803.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase; D-beta-D-heptose
           1-phosphate adenylyltransferase [Sulfuricurvum kujiense
           DSM 16994]
          Length = 477

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 33/143 (23%)

Query: 1   MHVFHNIEI---NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPIT 51
           MH+    EI   ++ L    K  V   G FD +H+GH   L++A    +      NS  +
Sbjct: 324 MHIKTKDEIYALSERLKKEGKKVVFTNGCFDILHVGHVKYLQEAKSYGDVLIVGLNSDSS 383

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQK 110
           V       R +   + P+   +  + +  IL  +     ++        +  +    I+ 
Sbjct: 384 V-------RELKGPTRPV---NTEADRAYILAALESVDYVVL------FSEETPHDLIKN 427

Query: 111 VLVEWLEVK------TVITGTKF 127
           +  + L VK        + G +F
Sbjct: 428 IAPDIL-VKGGDYEGKAVVGAEF 449


>gi|167629396|ref|YP_001679895.1| pantoate--beta-alanine ligase [Heliobacterium modesticaldum Ice1]
 gi|238687870|sp|B0TBP5|PANC_HELMI RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|167592136|gb|ABZ83884.1| pantoate--beta-alanine ligase [Heliobacterium modesticaldum Ice1]
          Length = 281

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 66/223 (29%), Gaps = 47/223 (21%)

Query: 1   MHVFHNIEI------NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  +I         Q+      G V  +G    +H GH  ++ +A +  +     V+S
Sbjct: 1   MRLIESIREMTAWSREQAREGRTIGFVPTMGY---LHEGHLTLMRRAREACDR---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                    ++ E  G   L    F         + +   V VE
Sbjct: 55  IFVNPLQFGAGEDFAEYPRDLIRDSRLAESAGVDVL----FAPSAREMYPKGYHTFVDVE 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYG--FHT 151
            L               V TV+             FG+  A    ++++  E        
Sbjct: 111 RLTEGLCGASRPGHFRGVTTVVCKLFNIVRPDVAYFGQKDAQQLAVIRRMTEDLNLPVSV 170

Query: 152 VFIDELRNNKSQIVSSSNI------RTA--LTKGHVLNAAHLL 186
           V +  +R      +SS N+      R A  +    +  A  L+
Sbjct: 171 VGVPIVREADGLAMSSRNVYLSPQERQAALVLSRALARARELI 213


>gi|86152327|ref|ZP_01070538.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840816|gb|EAQ58067.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 386

 Score = 39.0 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 18/171 (10%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           E  Q + N+L    +   + +FD +H  H  +    I  A+     V+ F         +
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD----LVVIF---LVESFDA 189

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   F L    +++ I   +    +  +      +  A+ +    ++ ++ + L    ++
Sbjct: 190 NGFEFELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIAKSLGCTKLV 247

Query: 123 TGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
            G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 248 VGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|256377739|ref|YP_003101399.1| cytidyltransferase [Actinosynnema mirum DSM 43827]
 gi|255922042|gb|ACU37553.1| cytidyltransferase-related domain protein [Actinosynnema mirum DSM
           43827]
          Length = 488

 Score = 39.0 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 20/116 (17%)

Query: 18  KGGVVAI--GNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSP 74
           +G  V    G FD +H GH  +L +A  +     + V ++ +   R +   S P+    P
Sbjct: 347 RGCQVVFTNGCFDILHDGHVSLLSRAKGL--GELLVVGVNADESVRRLKGPSRPVV---P 401

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
              + ++L  +G     +   F  +    S  + I     E L       G  +  
Sbjct: 402 LGERMRVLAALGCVD--VVVPFHAD----SPVELI-----ERLRPDVYAKGDDYTL 446


>gi|157415828|ref|YP_001483084.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386792|gb|ABV53107.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307748465|gb|ADN91735.1| sulfate adenylyltransferase, putative [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931653|gb|EFV10614.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 386

 Score = 39.0 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 18/171 (10%)

Query: 8   EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS 65
           E  Q + N+L    +   + +FD +H  H  +    I  A+     V+ F         +
Sbjct: 137 ENFQQIKNNLNAQKITAIVSSFDPLHRAHERMFRWTIDKAD----LVVIF---LVESFDA 189

Query: 66  SSPIFTLSPPSIQEKILEKMGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVI 122
           +   F L    +++ I   +    +  +      +  A+ +    ++ ++ + L    ++
Sbjct: 190 NGFEFELKEAYLKKFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIAKSLGCTKLV 247

Query: 123 TGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
            G          D    + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 248 VGQNHTGLGMFYDDNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|86743050|ref|YP_483450.1| pantoate--beta-alanine ligase [Frankia sp. CcI3]
 gi|86569912|gb|ABD13721.1| pantothenate synthetase [Frankia sp. CcI3]
          Length = 381

 Score = 39.0 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 46/174 (26%), Gaps = 23/174 (13%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P   +  V+ +G    +H GH  +L  A   A+     V +   +P              
Sbjct: 91  PRPTRAVVMTMG---ALHEGHASLLRAARAQADQ---VVATIYVNPLQFGAGEDLDRYPR 144

Query: 74  PPSIQEKILEKMGFSALIR---YKFTLETANYSAEQFIQKVLVEWLE------------V 118
             +    +    G   +                A    + +                  +
Sbjct: 145 TLAADLDVCAGEGVDLVFVPRAIHDPPPLVRLQAGPLGELLEGAARPGHFDGMLTLVGTM 204

Query: 119 KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNI 170
             ++      FG+  A     +++      F      ++ +R      +SS N+
Sbjct: 205 LHLVRPDLAFFGRKDAQQLVCIRRMVADLAFDVTVIGVETVREPDGLAMSSRNV 258


>gi|321160021|pdb|3Q10|A Chain A, Pantoate-Beta-Alanine Ligase From Yersinia Pestis
 gi|321160022|pdb|3Q10|B Chain B, Pantoate-Beta-Alanine Ligase From Yersinia Pestis
 gi|321160023|pdb|3Q10|C Chain C, Pantoate-Beta-Alanine Ligase From Yersinia Pestis
 gi|321160024|pdb|3Q10|D Chain D, Pantoate-Beta-Alanine Ligase From Yersinia Pestis
 gi|321160025|pdb|3Q12|A Chain A, Pantoate-Beta-Alanine Ligase From Yersinia Pestis In
           Complex With Pantoate.
 gi|321160026|pdb|3Q12|B Chain B, Pantoate-Beta-Alanine Ligase From Yersinia Pestis In
           Complex With Pantoate.
 gi|321160027|pdb|3Q12|C Chain C, Pantoate-Beta-Alanine Ligase From Yersinia Pestis In
           Complex With Pantoate.
 gi|321160028|pdb|3Q12|D Chain D, Pantoate-Beta-Alanine Ligase From Yersinia Pestis In
           Complex With Pantoate
          Length = 287

 Score = 39.0 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 37/193 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V++   +P    +               + L
Sbjct: 32  TMGN---LHEGHMTLVDEAKTRAD---VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKL 85

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+       ++  V+   + T++ G                  
Sbjct: 86  TRHGADLV----FAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 141

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K     G+    V +  +R      +SS N    LT+ 
Sbjct: 142 NLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRN--GYLTEE 199

Query: 178 HVLNAAHLLGYRF 190
               A  L    +
Sbjct: 200 ERQIAPQLSKIMW 212


>gi|307638010|gb|ADN80460.1| Nicotinate-nucleotide adenylyl transferase [Helicobacter pylori
           908]
          Length = 174

 Score = 39.0 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++     + VL                  L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIEQTLELLPFVQLIVL------PAYQNPFKKPCFLDAKTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 72  LK--GMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNAQE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDVPISSSAIRASL 172


>gi|320591573|gb|EFX04012.1| cholinephosphate cytidylyltransferase [Grosmannia clavigera kw1407]
          Length = 491

 Score = 39.0 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 65/201 (32%), Gaps = 33/201 (16%)

Query: 12  SLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPI 69
           +LP   +   V A G FD  HLGH   LEQA K      + V ++ +            +
Sbjct: 144 NLPPVGRPVRVYADGVFDLFHLGHMRQLEQAKKAFPEVYLMVGVTGD----EETHKRKGL 199

Query: 70  FTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV--ITGTK 126
             LS    + + L        ++               +I  V  ++LE + +  +    
Sbjct: 200 TVLSG-KERAETLRHCKWVDEVVE-----------NCPWI--VTPDFLEARQIDYVAHDD 245

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHVLNAAHL 185
             +G     D     K   K+         L   +++ VS++  I   +       A  L
Sbjct: 246 IPYGAAEGDDIYQPIKAAGKF---------LVTQRTEGVSTTGIITKIVRDYEKYIARQL 296

Query: 186 LGYRFTIESDVIHGEKIGRTL 206
                  E +V   +K    L
Sbjct: 297 KRGTSRQELNVSWLKKNELEL 317


>gi|326773764|ref|ZP_08233047.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces viscosus
           C505]
 gi|326636994|gb|EGE37897.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces viscosus
           C505]
          Length = 140

 Score = 39.0 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 19/109 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G+FD +H GH  +L +A  + +   + + +          S       +    +  
Sbjct: 4   IITYGSFDLLHYGHIELLRRAKAMGDYLIVALST-----DEFSASKGKRAYFTYEQRKAM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKF 127
           +        ++             EQ   +    ++   +   + G  +
Sbjct: 59  LEAVRYVDMVV------------PEQTWGQKSRDIDEYGIDVFVIGDDW 95


>gi|108562431|ref|YP_626747.1| pantoate--beta-alanine ligase [Helicobacter pylori HPAG1]
 gi|123073858|sp|Q1CVE9|PANC_HELPH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|107836204|gb|ABF84073.1| pantoate-beta-alanine ligase [Helicobacter pylori HPAG1]
          Length = 276

 Score = 39.0 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +    +L+  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALREYRKNLEESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           +P     +        P      + EK+G +A+    F  +       +  Q++ 
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKLGVNAV----FAPKIGEMYPYEAEQRLK 105


>gi|261838879|gb|ACX98644.1| pantoate--beta-alanine ligase [Helicobacter pylori 52]
          Length = 276

 Score = 39.0 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 33/231 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR------YKFTLE---------TANY 102
           +P     +        P      + E +G +A+        Y + +E           + 
Sbjct: 55  NPTQFGPNEDFNAYPRPLEKDLALCEGLGVNAVFLPKTNEMYPYEIEQRLKLYAPTFLSQ 114

Query: 103 SAEQFIQKVLVEW-----LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           S E  ++K   +      L++  ++  T+  FGK  A    I+Q   +            
Sbjct: 115 SLEGAMRKGHFDGVVQVVLKLFHLVHPTRAYFGKKDAQQLLIIQHLVKDLLLDIEITPCE 174

Query: 157 -LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
            +R++ +  +SS N+   L       A  +     +I+  +  GEK    L
Sbjct: 175 IVRDDDNLALSSRNV--YLNATQRKQALAIPKTLESIKQAIDKGEKACEKL 223


>gi|260495450|ref|ZP_05815576.1| citrate (Pro-3S)-lyase ligase [Fusobacterium sp. 3_1_33]
 gi|260196987|gb|EEW94508.1| citrate (Pro-3S)-lyase ligase [Fusobacterium sp. 3_1_33]
          Length = 345

 Score = 39.0 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKASSENDILHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   + F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIKIFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
           +L+K  E      V +   + + +  +S+S +R  +  G++ +  +L
Sbjct: 271 MLKKLPE-NNIECVVVPRKKYSDNV-ISASTVRQIIKSGNLEDLKNL 315


>gi|323693019|ref|ZP_08107239.1| glycerol-3-phosphate cytidyltransferase [Clostridium symbiosum
           WAL-14673]
 gi|323502900|gb|EGB18742.1| glycerol-3-phosphate cytidyltransferase [Clostridium symbiosum
           WAL-14673]
          Length = 455

 Score = 39.0 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 55/155 (35%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +L++A K+ +   + V S  F+       ++   +      S +
Sbjct: 4   VITYGTYDLLHEGHIRLLKRAKKLGDYLIVGVTSDLFD-------KNRGKMNVRQSLSER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              +++ G    +I      E         I       L +     G+ +       G  
Sbjct: 57  IIAIKETGLADQIIV----EEYEGQKISDIID------LNIDIFTVGSDW------IGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L+   E           +  ++++ VSS+ +R 
Sbjct: 101 DYLKNYCEV----------VYLDRTEGVSSTALRN 125


>gi|295693364|ref|YP_003601974.1| hypothetical protein LCRIS_01502 [Lactobacillus crispatus ST1]
 gi|295031470|emb|CBL50949.1| UPF0348 protein [Lactobacillus crispatus ST1]
          Length = 383

 Score = 39.0 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  +A N PI VL         +Q       +     + K+  + G
Sbjct: 10  FNPFHSGHEFLLNQARLVAGNDPIVVL----MSGNYVQRGE--MAIMSKWERAKVALQSG 63

Query: 87  FSALIRYKFTL--ETANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+   E A+  A   I+++    L V  ++ G
Sbjct: 64  ADLVFETPFSTVVEPADLFALGNIEQLA--KLGVTDLVFG 101


>gi|222823453|ref|YP_002575027.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter lari RM2100]
 gi|222538675|gb|ACM63776.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter lari RM2100]
          Length = 181

 Score = 39.0 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 29/172 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SF-NPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G+FD  HLGH+ I+  A+       + ++ +F +P  +    +            + K  
Sbjct: 8   GSFDPPHLGHNAIVFNALANLELDKLIIMPTFISPFKQEFTANEQK---------RLKWC 58

Query: 83  EKM--GFSALIRYKFTLETANYSAEQFIQKVL--VEWLEVK--TVITGTKFRFGKDRAGD 136
           E +  G   +    F  E         I+ V    +  E+    +I G       ++  +
Sbjct: 59  EMIWGGLEKVEICDF--EIKKQRPVPSIESVDFLYKQYEISKFYLILGADHLQSLEKWHE 116

Query: 137 RGILQKRGEKYGFHT-----VFIDEL--RNNKSQIVSSSNIRTALTKGHVLN 181
              LQ   E   F       +FI +     +    +SSS IR  L    V  
Sbjct: 117 FERLQNLVE---FVVAKRDGIFIPKHFKTLDTKVDISSSFIRQTLQTSQVCE 165


>gi|22124698|ref|NP_668121.1| pantoate--beta-alanine ligase [Yersinia pestis KIM 10]
 gi|45440142|ref|NP_991681.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808894|ref|YP_652810.1| pantoate--beta-alanine ligase [Yersinia pestis Antiqua]
 gi|108810852|ref|YP_646619.1| pantoate--beta-alanine ligase [Yersinia pestis Nepal516]
 gi|145600213|ref|YP_001164289.1| pantoate--beta-alanine ligase [Yersinia pestis Pestoides F]
 gi|153997555|ref|ZP_02022655.1| pantoate--beta-alanine ligase [Yersinia pestis CA88-4125]
 gi|162418333|ref|YP_001605573.1| pantoate--beta-alanine ligase [Yersinia pestis Angola]
 gi|165925681|ref|ZP_02221513.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165936684|ref|ZP_02225251.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009985|ref|ZP_02230883.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214070|ref|ZP_02240105.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399563|ref|ZP_02305087.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420629|ref|ZP_02312382.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423615|ref|ZP_02315368.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167469891|ref|ZP_02334595.1| pantoate--beta-alanine ligase [Yersinia pestis FV-1]
 gi|218930419|ref|YP_002348294.1| pantoate--beta-alanine ligase [Yersinia pestis CO92]
 gi|229839040|ref|ZP_04459199.1| pantothenate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896519|ref|ZP_04511687.1| pantothenate synthetase [Yersinia pestis Pestoides A]
 gi|229899605|ref|ZP_04514746.1| pantothenate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901061|ref|ZP_04516184.1| pantothenate synthetase [Yersinia pestis Nepal516]
 gi|270489238|ref|ZP_06206312.1| pantoate--beta-alanine ligase [Yersinia pestis KIM D27]
 gi|294505108|ref|YP_003569170.1| pantoate--beta-alanine ligase [Yersinia pestis Z176003]
 gi|24638097|sp|Q8ZBK7|PANC_YERPE RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|123073558|sp|Q1CLW1|PANC_YERPN RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|123245580|sp|Q1C3V7|PANC_YERPA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|158706051|sp|A4TPV4|PANC_YERPP RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226700773|sp|A9R1G3|PANC_YERPG RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|21957512|gb|AAM84372.1|AE013681_2 pantothenate synthetase [Yersinia pestis KIM 10]
 gi|45434998|gb|AAS60558.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774500|gb|ABG17019.1| pantothenate synthetase [Yersinia pestis Nepal516]
 gi|108780807|gb|ABG14865.1| pantothenate synthetase [Yersinia pestis Antiqua]
 gi|115349030|emb|CAL21991.1| pantoate--beta-alanine ligase [Yersinia pestis CO92]
 gi|145211909|gb|ABP41316.1| pantothenate synthetase [Yersinia pestis Pestoides F]
 gi|149289192|gb|EDM39272.1| pantoate--beta-alanine ligase [Yersinia pestis CA88-4125]
 gi|162351148|gb|ABX85096.1| pantoate--beta-alanine ligase [Yersinia pestis Angola]
 gi|165915333|gb|EDR33943.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922293|gb|EDR39470.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165990892|gb|EDR43193.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204701|gb|EDR49181.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961435|gb|EDR57456.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167052067|gb|EDR63475.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057785|gb|EDR67531.1| pantoate--beta-alanine ligase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229681786|gb|EEO77879.1| pantothenate synthetase [Yersinia pestis Nepal516]
 gi|229687097|gb|EEO79172.1| pantothenate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695406|gb|EEO85453.1| pantothenate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700593|gb|EEO88624.1| pantothenate synthetase [Yersinia pestis Pestoides A]
 gi|262363169|gb|ACY59890.1| pantoate--beta-alanine ligase [Yersinia pestis D106004]
 gi|262367100|gb|ACY63657.1| pantoate--beta-alanine ligase [Yersinia pestis D182038]
 gi|270337742|gb|EFA48519.1| pantoate--beta-alanine ligase [Yersinia pestis KIM D27]
 gi|294355567|gb|ADE65908.1| pantoate--beta-alanine ligase [Yersinia pestis Z176003]
 gi|320016603|gb|ADW00175.1| pantothenate synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 284

 Score = 39.0 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 37/193 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V++   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVDEAKTRAD---VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+       ++  V+   + T++ G                  
Sbjct: 83  TRHGADLV----FAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K     G+    V +  +R      +SS N    LT+ 
Sbjct: 139 NLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRN--GYLTEE 196

Query: 178 HVLNAAHLLGYRF 190
               A  L    +
Sbjct: 197 ERQIAPQLSKIMW 209


>gi|325996613|gb|ADZ52018.1| Nicotinate-nucleotide adenylyltransferase [Helicobacter pylori
           2018]
 gi|325998203|gb|ADZ50411.1| putative nicotinate-nucleotide adenylyltransferase [Helicobacter
           pylori 2017]
          Length = 174

 Score = 39.0 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++     + VL                  L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIEQTLELLPFVQLIVL------PAYQNPFKKPCFLDAKTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 72  LK--GMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDVPISSSAIRASL 172


>gi|300786157|ref|YP_003766448.1| D-beta-D-heptose 7-phosphate kinase [Amycolatopsis mediterranei
           U32]
 gi|299795671|gb|ADJ46046.1| D-beta-D-heptose 7-phosphate kinase [Amycolatopsis mediterranei
           U32]
          Length = 455

 Score = 39.0 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 22/134 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L QA  + +   +  L+ +   R +     P+        + ++L  
Sbjct: 328 GCFDLLHPGHVSLLRQARALGDAL-VVCLNSDASVRGLKGPGRPLVR---DRDRARLLCA 383

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +    A+    F       S    +     E L     + G  +      A      ++ 
Sbjct: 384 LSFVDAVAV--FDEP----SPTAVL-----EKLRPDVWVKGGDY------AEAVLPEREV 426

Query: 144 GEKYGFHTVFIDEL 157
            E++G   V +  +
Sbjct: 427 VERHGGEVVLVPTV 440


>gi|238853785|ref|ZP_04644151.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|238833594|gb|EEQ25865.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
          Length = 385

 Score = 39.0 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  ++ N PI V+         +Q       +     + K     G   
Sbjct: 13  FHSGHEFLLNQARLVSENDPIIVM----MSGNYVQRGQ--MAIMDKWQRAKAALNSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
           +    F    A   A+ F      ++  L V  +  G
Sbjct: 67  VFELPF--SFAVQPADIFANGSIRMLSNLGVSELFFG 101


>gi|116630028|ref|YP_815200.1| hypothetical protein LGAS_1400 [Lactobacillus gasseri ATCC 33323]
 gi|311110342|ref|ZP_07711739.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
 gi|122273035|sp|Q041W0|Y1400_LACGA RecName: Full=UPF0348 protein LGAS_1400
 gi|116095610|gb|ABJ60762.1| Predicted nucleotidyltransferase [Lactobacillus gasseri ATCC 33323]
 gi|311065496|gb|EFQ45836.1| conserved hypothetical protein [Lactobacillus gasseri MV-22]
          Length = 385

 Score = 39.0 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  ++ N PI V+         +Q       +     + K     G   
Sbjct: 13  FHSGHEFLLNQARLVSENDPIIVM----MSGNYVQRGQ--MAIMDKWQRAKAALNSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
           +    F    A   A+ F      ++  L V  +  G
Sbjct: 67  VFELPF--SFAVQPADIFANGSIRMLSNLGVSELFFG 101


>gi|307299178|ref|ZP_07578979.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914974|gb|EFN45360.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 194

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 18/166 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H GH ++   AI+      + V    P     I       T++P   + K LE 
Sbjct: 16  GSFDPVHNGHIIVAILAIEQLELERLYV---TP---AYIPPHKVSSTIAPYEKRMKWLEI 69

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK-TVITGTKFRFGKDRAGDRGIL- 140
              G        +  +    S   F  +        K  ++ G       D   +   L 
Sbjct: 70  AFEGVECAHVSDYERDRGGVSYSLFTVRHFSRVHNCKPFLVIGEDSLASLDSWYEYESLL 129

Query: 141 -QKRGEKYGFHTVFIDELRNNKSQI-------VSSSNIRTALTKGH 178
            +     Y  +++ ++     +          +SS+ IR  L++G 
Sbjct: 130 REATIAVYPRNSIEVETALKAEIVWLDAPRFEISSTEIRRRLSEGK 175


>gi|51595079|ref|YP_069270.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis IP
           32953]
 gi|153948581|ref|YP_001402301.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis IP
           31758]
 gi|170025688|ref|YP_001722193.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis YPIII]
 gi|186894089|ref|YP_001871201.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis PB1/+]
 gi|78099064|sp|Q66EG4|PANC_YERPS RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226700772|sp|B2K533|PANC_YERPB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|229576670|sp|A7FM23|PANC_YERP3 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|238688435|sp|B1JK36|PANC_YERPY RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|51588361|emb|CAH19969.1| pantothenate synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960076|gb|ABS47537.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis IP
           31758]
 gi|169752222|gb|ACA69740.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis YPIII]
 gi|186697115|gb|ACC87744.1| pantoate--beta-alanine ligase [Yersinia pseudotuberculosis PB1/+]
          Length = 284

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 37/193 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V++   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVDEAKTRAD---VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+       ++  V+   + T++ G                  
Sbjct: 83  TRHGADLV----FAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K     G+    V +  +R      +SS N    LT+ 
Sbjct: 139 NLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRN--GYLTEE 196

Query: 178 HVLNAAHLLGYRF 190
               A  L    +
Sbjct: 197 ERQIAPQLSKIMW 209


>gi|330501584|ref|YP_004378453.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas mendocina NK-01]
 gi|328915870|gb|AEB56701.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas mendocina NK-01]
          Length = 473

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   I  ++ +     +     P  
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRL-IVAINDDASVSRLKGPGRP-- 388

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        +  + E+ +     + ++   ++ G  +  
Sbjct: 389 -INSVDRRMAVLAGLGAVDWVV------SFSEDTPERLL-----KQVQPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G D+     I+Q     YG     +  + N+     S++ I   +   
Sbjct: 435 GIDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKIRSK 473


>gi|317047071|ref|YP_004114719.1| citrate lyase ligase [Pantoea sp. At-9b]
 gi|316948688|gb|ADU68163.1| citrate lyase ligase [Pantoea sp. At-9b]
          Length = 339

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 12/171 (7%)

Query: 32  LGHHLILEQAIKIANNSPITVL----SFNPHP---RTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++EQA    +   + V+    SF P     + +   ++ +  ++     + I+ +
Sbjct: 162 LGHRYLVEQAAARCDWLHLFVVSEDASFFPFSARWKMVQSGTAHLPNITLHEGSQYIISR 221

Query: 85  MGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             F A    +       +S    +  +  +   L +     G++      R  +  + Q 
Sbjct: 222 ATFPAYFLKESGKVQQAWSEIDLLLFRNHIAPALGITHRFIGSEPFCEITRQYNHSMHQL 281

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
                    V I  ++      +S+S +R  L          ++       
Sbjct: 282 LTGA--VEVVEIPRIKA-AGHAISASEVRRLLKTHQFSRIREIVPDTTFAH 329


>gi|332707457|ref|ZP_08427506.1| cytidyltransferase-related protein [Lyngbya majuscula 3L]
 gi|332353808|gb|EGJ33299.1| cytidyltransferase-related protein [Lyngbya majuscula 3L]
          Length = 162

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 25/124 (20%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH-------PRTIIQSSS 67
              +  V   G FD +H+GH   L+ A  +       V+  N         P    Q   
Sbjct: 19  ERWRPLVFTNGCFDLLHIGHVRYLKIAKSL---GSSLVVGLNSDQSVNRIKPS---QPGY 72

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   L P   + +IL  +     ++        A  +A + I     E L+ +  + G  
Sbjct: 73  PSRPLVPEIQRAEILATLKPVDGVVI------FAETTANRLI-----EALQPEVYVKGGD 121

Query: 127 FRFG 130
           +   
Sbjct: 122 YTLS 125


>gi|322490378|emb|CBZ25638.1| cholinephosphate cytidylyltransferase A,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 589

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 43/153 (28%), Gaps = 22/153 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH  ++  A+K  N   + V               P   +     +      
Sbjct: 442 GVFDLCHAGHKKLMANALKFGNRLIVGVCGDE----ECASYKRPP--IMTTEER------ 489

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              + +   K+  E    S    I   ++ +  +  V+ G ++                 
Sbjct: 490 --INEVRLCKYVSEVIPNSPVTGITAEMIRYYNIHVVVCGEEYNT------PTDTYYAVP 541

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + G           + S ++S   IR A    
Sbjct: 542 RRMGILRTVPRTPGISTSVLIS--RIRAASDSS 572


>gi|319786274|ref|YP_004145749.1| cytidyltransferase-related domain protein [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317464786|gb|ADV26518.1| cytidyltransferase-related domain protein [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 139

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
          VV  G FD +HLGH  ILE+A ++ +   + V
Sbjct: 14 VVTFGTFDVLHLGHLRILERAAELGDRLVVGV 45


>gi|288556127|ref|YP_003428062.1| pantothenate synthetase [Bacillus pseudofirmus OF4]
 gi|288547287|gb|ADC51170.1| pantothenate synthetase [Bacillus pseudofirmus OF4]
          Length = 283

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 35/197 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I   +     +K      G V  +G    +H GH  ++E+A +  +   I VLS
Sbjct: 1   MRVVKTINALREEITAVKRKQQSIGFVPTMGY---LHEGHMSLIEEARRQHD---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVL- 112
              +P      +  +       ++++ I +++G   L+ Y  T E         I     
Sbjct: 55  IFVNPLQ-FGPNEDLERYPRDFVRDENIAKELGVD-LLFYPDTKEMYPADPSMTIHVTEG 112

Query: 113 VEWL----------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI- 154
           V  L           V TV+             FG+  A    I+    + +      I 
Sbjct: 113 VNVLCGKSRPGHFDGVTTVVMKLFMLVQPDQAYFGQKDAQQVAIITNMVDMFNIPVEVIP 172

Query: 155 -DELRNNKSQIVSSSNI 170
              +R       SS N+
Sbjct: 173 CPTVREEDGLAKSSRNV 189


>gi|163795684|ref|ZP_02189649.1| cytidyltransferase-related domain [alpha proteobacterium BAL199]
 gi|159178980|gb|EDP63515.1| cytidyltransferase-related domain [alpha proteobacterium BAL199]
          Length = 513

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 32/162 (19%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAI-KIANNSPITV-LSFNPHPRTIIQSSSPIFT 71
           P   K  V+  G FD +H GH   +   +   +  + + V ++ + H   + ++    F 
Sbjct: 23  PGRKKKIVMCHGTFDLVHPGH---IRHLVYARSKGAKLVVGVTADHH---VKKADHRPFV 76

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
             P  ++   L  +     +                      +  +     + G +++ G
Sbjct: 77  --PEGLRALNLAALETVDYVTIDP-----------HATPIENILTIRPDYFVKGYEYQKG 123

Query: 131 --KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
               R  +    ++  E YG   +F          + SSS I
Sbjct: 124 GLHPRTAEE---KQAVESYGGEVIFTP-----GDIVYSSSAI 157


>gi|319796304|ref|YP_004157944.1| cytidyltransferase-related domain protein [Variovorax paradoxus
          EPS]
 gi|315598767|gb|ADU39833.1| cytidyltransferase-related domain protein [Variovorax paradoxus
          EPS]
          Length = 356

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           + IG F  +H GH  ++E+ ++ A+   I V+  +  PR++               +E+
Sbjct: 9  AIVIGRFQPVHFGHQRLIEEGLRAAD-RVIVVVGSDRKPRSVKNPF-------TFDERER 60

Query: 81 ILEKM 85
          ++   
Sbjct: 61 MVRAC 65


>gi|282164422|ref|YP_003356807.1| putative cytidyltransferase [Methanocella paludicola SANAE]
 gi|327488416|sp|D1YZF2|RIBL_METPS RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|282156736|dbj|BAI61824.1| putative cytidyltransferase [Methanocella paludicola SANAE]
          Length = 139

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 25/160 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD +H GH L L +A K+ +   + V        TI     P   L P + +  
Sbjct: 4   VVATGTFDILHPGHVLYLSEAGKLGDELYVIVA----RDSTIKHKRKP---LVPENQRLF 56

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++  +               A   +E  + K  +  ++   +  G        +  D   
Sbjct: 57  MVRALKCVDH----------AMLGSEDDMFK-PIREIDPDIITIGFN------QHWDEEA 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           LQ++  + G     +   + + +   SS +IR  + +   
Sbjct: 100 LQRQLIERGLKAKVVRITKCDTAPYASSRHIREKIKESDC 139


>gi|206896494|ref|YP_002246960.1| pantoate--beta-alanine ligase [Coprothermobacter proteolyticus
          DSM 5265]
 gi|226700752|sp|B5Y863|PANC_COPPD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|206739111|gb|ACI18189.1| pantoate--beta-alanine ligase [Coprothermobacter proteolyticus
          DSM 5265]
          Length = 287

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 12/98 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M +  +I+  +     +K      G V  +G    +H GH  +++ A K  +   + V+S
Sbjct: 1  MEIVRDIKTMREKVAEMKRQGKSVGLVPTMGY---LHEGHLALIDTARKEND---VVVVS 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +P     +   +          ++  + G   L  
Sbjct: 55 DFVNPLQFGPNEDYLVYPRDMDRDAQLCSEHGVDFLFV 92


>gi|86607275|ref|YP_476038.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus sp.
           JA-3-3Ab]
 gi|108860876|sp|Q2JRH9|PANCY_SYNJA RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|86555817|gb|ABD00775.1| pantoate--beta-alanine ligase/cytidylate kinase [Synechococcus sp.
           JA-3-3Ab]
          Length = 540

 Score = 39.0 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 38/235 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M     +   +      +G  +     +G+   +H GH  ++ +  +  ++   TV+S  
Sbjct: 1   MQWLRTVAALREQVASWRGSTIGLVPTMGS---LHEGHLSLIRRCRQECDH---TVVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKIL-EKMGFSALI-----RYKFTLETAN-----YSAE 105
            +P      +            ++ L E  G   +             TA         E
Sbjct: 55  VNPLQ-FGPNEDWDRYPRDEEGDRALCEAAGVDVVFAPDPQEMGADPATAGDRTWVMPPE 113

Query: 106 QFIQKVLVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
             +Q +                L++  ++   +  FG+  A    I+Q+  +     T  
Sbjct: 114 SLLQTLCAPHRPGHFRGVATIVLQLLNLVQPQRAYFGQKDAQQLAIIQRLVQDLQIPTTI 173

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +    +R       SS N    L+      AA L             G+     +
Sbjct: 174 VPCPTVREADGLAYSSRN--RYLSAVERQVAASLYRALRRGYDHWQAGDPSAEGI 226


>gi|332160215|ref|YP_004296792.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318607219|emb|CBY28717.1| nadr transcriptional regulator; Nicotinamide-nucleotide
           adenylyltransferase, NadR family; Ribosylnicotinamide
           kinase [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664445|gb|ADZ41089.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860096|emb|CBX70420.1| transcriptional regulator nadR [Yersinia enterocolitica W22703]
          Length = 427

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P    + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCYDEPRDLELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +      + +++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDENGIEPYPHGWDVWSLGVKKFMNEKGIV--PN 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYREQFGIETILIDPERSF--MNISGRQIRR 213


>gi|239998634|ref|ZP_04718558.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae 35/02]
 gi|240080338|ref|ZP_04724881.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae FA19]
 gi|240115288|ref|ZP_04729350.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae PID18]
 gi|240117575|ref|ZP_04731637.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae PID1]
 gi|240123131|ref|ZP_04736087.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae PID332]
 gi|260440895|ref|ZP_05794711.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae DGI2]
 gi|268594489|ref|ZP_06128656.1| pantothenate synthetase [Neisseria gonorrhoeae 35/02]
 gi|268596485|ref|ZP_06130652.1| pantothenate synthetase [Neisseria gonorrhoeae FA19]
 gi|268600969|ref|ZP_06135136.1| pantothenate synthetase [Neisseria gonorrhoeae PID18]
 gi|268603279|ref|ZP_06137446.1| pantothenate synthetase [Neisseria gonorrhoeae PID1]
 gi|268681759|ref|ZP_06148621.1| pantothenate synthetase [Neisseria gonorrhoeae PID332]
 gi|291044218|ref|ZP_06569927.1| pantothenate synthetase [Neisseria gonorrhoeae DGI2]
 gi|293399417|ref|ZP_06643570.1| pantoate-beta-alanine ligase [Neisseria gonorrhoeae F62]
 gi|268547878|gb|EEZ43296.1| pantothenate synthetase [Neisseria gonorrhoeae 35/02]
 gi|268550273|gb|EEZ45292.1| pantothenate synthetase [Neisseria gonorrhoeae FA19]
 gi|268585100|gb|EEZ49776.1| pantothenate synthetase [Neisseria gonorrhoeae PID18]
 gi|268587410|gb|EEZ52086.1| pantothenate synthetase [Neisseria gonorrhoeae PID1]
 gi|268622043|gb|EEZ54443.1| pantothenate synthetase [Neisseria gonorrhoeae PID332]
 gi|291011112|gb|EFE03108.1| pantothenate synthetase [Neisseria gonorrhoeae DGI2]
 gi|291609986|gb|EFF39108.1| pantoate-beta-alanine ligase [Neisseria gonorrhoeae F62]
 gi|317163906|gb|ADV07447.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 278

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 14/135 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   ++        +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRTWRENIGKVAFVPTMGN---LHEGHLALVREARKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                Q                 L   G + +    F  +          Q+  VE   +
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGVAVV----FAPDEKELYP-NVEQRYNVEPPHL 109

Query: 119 KTVITGTKFRFGKDR 133
           +  + G  FR G  R
Sbjct: 110 QNELCGK-FRPGHFR 123


>gi|189467873|ref|ZP_03016658.1| hypothetical protein BACINT_04265 [Bacteroides intestinalis DSM
           17393]
 gi|189436137|gb|EDV05122.1| hypothetical protein BACINT_04265 [Bacteroides intestinalis DSM
           17393]
          Length = 281

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 39/200 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + L+      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIVHTIKDLQAGLSDLRAQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P      +              +LE  G + +    F    A    E   ++    
Sbjct: 58  ---NPTQFNDKNDLEKYPRTLDADCALLEACGAAFV----FAPSVAEMYPEPDTRQFSYA 110

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V  ++             FG+       I+++   +  +    
Sbjct: 111 PLDTVMEGAFRPGHFNGVCQIVSKLFDAVKPDRAYFGEKDFQQLAIIREMVRRMNYSLEI 170

Query: 154 I--DELRNNKSQIVSSSNIR 171
           +    +R      +SS N R
Sbjct: 171 VGCPIIREEDGLALSSRNAR 190


>gi|170782971|ref|YP_001711305.1| putative bifunctional kinase/glycosyl transferase [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169157541|emb|CAQ02735.1| putative bifunctional kinase/glycosyl transferase [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 460

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH      A +   +  + +L+ +   R +     P   +    
Sbjct: 324 GGTVVATGGCFDLVHAGH-ARTLAAARALGDCLVVLLNSDDSVRRLKGPERP---IMTEE 379

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
            +  +L  +G    +        +  + E+ ++ + 
Sbjct: 380 DRVDLLMSLGVVDAVVL-----FSEDTPEEALRSIK 410


>gi|94267057|ref|ZP_01290698.1| Cytidyltransferase-related [delta proteobacterium MLMS-1]
 gi|93452234|gb|EAT02885.1| Cytidyltransferase-related [delta proteobacterium MLMS-1]
          Length = 277

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 60/188 (31%), Gaps = 37/188 (19%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E+A ++A      V+S   +P    +++        P    + L
Sbjct: 29  TMGN---LHAGHLALVERAGQLARR---VVVSIFVNPAQFERAADLAAYPRTPEEDRQKL 82

Query: 83  EKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWL--------------EVKTVITG-TK 126
              G   L    F  E A    A Q   +V V  L               V T++     
Sbjct: 83  TTAGVDCL----FAPEAAAIYPAGQLATRVEVPELSEILEGASRPGHFTGVATIVCKLFN 138

Query: 127 ------FRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALTKGH 178
                   FG+       +L++           +    +R +    +SS   R  L    
Sbjct: 139 LVEPEIALFGEKDFQQLALLRRMAADLNMAVELVALPTVRESDGLAMSS---RNRLLNAE 195

Query: 179 VLNAAHLL 186
               A LL
Sbjct: 196 QRRLAPLL 203


>gi|8134620|sp|O86953|PANC_THENE RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|3282095|emb|CAA07518.1| hypothetical protein [Thermotoga neapolitana]
          Length = 280

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MRIIETIEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARAEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LEK     +    +   +  + + +  E  + K
Sbjct: 55  IFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCVFHPSVEEMYPPDFSTFVEETKLSK 114

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 115 PLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 174

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 175 IVREPDGLAMSSRNV 189


>gi|59800879|ref|YP_207591.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae FA 1090]
 gi|240013756|ref|ZP_04720669.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae DGI18]
 gi|240016194|ref|ZP_04722734.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae FA6140]
 gi|240120824|ref|ZP_04733786.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae PID24-1]
 gi|254493351|ref|ZP_05106522.1| pantothenate synthetase [Neisseria gonorrhoeae 1291]
 gi|75432544|sp|Q5F9F8|PANC_NEIG1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|59717774|gb|AAW89179.1| putative pantoate--beta-alanine ligase [Neisseria gonorrhoeae FA
           1090]
 gi|226512391|gb|EEH61736.1| pantothenate synthetase [Neisseria gonorrhoeae 1291]
          Length = 278

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 14/135 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   ++        +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRTWRENIGKVAFVPTMGN---LHEGHLALVREARKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                Q                 L   G + +    F  +          Q+  VE   +
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGVAVV----FAPDEKELYP-NVEQRYNVEPPHL 109

Query: 119 KTVITGTKFRFGKDR 133
           +  + G  FR G  R
Sbjct: 110 QNELCGK-FRPGHFR 123


>gi|291547261|emb|CBL20369.1| pantothenate synthetase [Ruminococcus sp. SR1/5]
          Length = 279

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 32/192 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   +E  +      K      G V  +G    +H GH  ++++  +  +   I V+S
Sbjct: 1   MQVTKTVEETRKQIKAWKKEGKTVGLVPTMGF---LHEGHASLIKKCREQND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              K+ E +G   LI      E  +          L E
Sbjct: 55  DFVNPTQFGPTEDLEAYPRDFERDSKLCESLGAD-LIFCPEPSEMYHDPHAFVSIDTLSE 113

Query: 115 WLEVK-----------------TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L  K                  ++   +  FG+  A    I++K      F    +   
Sbjct: 114 TLCGKTRPIHFKGVCTVVTKLFHIVAPDRAYFGQKDAQQLAIIRKMVSDLNFDIEIVGCP 173

Query: 156 ELRNNKSQIVSS 167
            +R       SS
Sbjct: 174 IIREEDGLAKSS 185


>gi|290771212|emb|CBK33740.1| Met3p [Saccharomyces cerevisiae EC1118]
          Length = 511

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREGNAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|317011863|gb|ADU82471.1| pantoate--beta-alanine ligase [Helicobacter pylori Lithuania75]
          Length = 276

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +   I   +     L+  V     +G    +H GH  ++E+++K   ++ ++V     
Sbjct: 1   MRMLETIAALREYRKSLEESVGFVPTMG---ALHKGHQSLIERSLKENPHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + E +G SA+    F  E +     +  Q++ +
Sbjct: 55  NPTQFGANEDFNAYPRPLEKDLALCETLGVSAV----FVPEMSEMYPYETEQRLKL 106


>gi|332526560|ref|ZP_08402670.1| pantothenate synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110826|gb|EGJ11003.1| pantothenate synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 188

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 12/113 (10%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M   H I E+  +L    +   V  +GN   +H GH  ++ QA  +    P+    F   
Sbjct: 1   MKTIHTIAELRAALAGQTRTAFVPTMGN---LHDGHLALVRQAATL--GGPVVASVFVNR 55

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKV 111
               +            +   ++L   G   L    F  + A    E  + +V
Sbjct: 56  -LQFLPHEDFDRYPRTLARDAELLAGAGCDLL----FAPDEAELYPEPQVYRV 103


>gi|224140661|ref|XP_002323699.1| predicted protein [Populus trichocarpa]
 gi|222868329|gb|EEF05460.1| predicted protein [Populus trichocarpa]
          Length = 429

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 31/160 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     II +  P    +P   +  ++  
Sbjct: 70  GCFDMMHYGHCNALRQARALGDQLVVGVVSDD----EIIANKGPPV--TPVHERMIMVNA 123

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +      +++          +  +I G       D      + 
Sbjct: 124 VKWVDEVISDAPYAITEDFMKKLFDEY---------NIDYIIHGDDPCVLPDGTDAYALA 174

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +K G                +++ VSS++I  R  L    
Sbjct: 175 KKAGRYKQIK----------RTEGVSSTDIVGRMLLCTRE 204


>gi|196233923|ref|ZP_03132760.1| pantoate/beta-alanine ligase [Chthoniobacter flavus Ellin428]
 gi|196221972|gb|EDY16505.1| pantoate/beta-alanine ligase [Chthoniobacter flavus Ellin428]
          Length = 254

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%)

Query: 30 IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
          +H GH  ++++A K+A    + V+S   +P              P +  +K+  + G   
Sbjct: 4  LHRGHTTLIDRARKLAGPKGMVVVSIFVNPTQFGPKEDFSRYPRPFATDKKLCAEHGVDV 63

Query: 90 LI 91
          + 
Sbjct: 64 IF 65


>gi|126740958|ref|ZP_01756641.1| pantoate--beta-alanine ligase [Roseobacter sp. SK209-2-6]
 gi|126717884|gb|EBA14603.1| pantoate--beta-alanine ligase [Roseobacter sp. SK209-2-6]
          Length = 281

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 37/199 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++E A +  +     +++   +P+                  
Sbjct: 27  GVVPTMG---ALHAGHLSLVEAAKEACDR---VIVTIFVNPKQFNNPEDLANYPRTEHED 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVI-- 122
              L   G  A+              + F   V V  +               V TV+  
Sbjct: 81  AVKLAPYGVDAIYVPDPDE----IYPQGFATNVSVTGVSDQMEGACRPGHFDGVATVVAK 136

Query: 123 ------TGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTAL 174
                  G  F FG+       ++++           +    +R      +SS N+R  L
Sbjct: 137 LFLQTGAGKAF-FGEKDYQQLLVVRRMARDLDIPIEVIGCPTVRETSGLAMSSRNLR--L 193

Query: 175 TKGHVLNAAHLLGYRFTIE 193
           ++  +  A+ L      + 
Sbjct: 194 SEEGLEKASKLYPVLQRLS 212


>gi|297183524|gb|ADI19653.1| diadenosine tetraphosphate (ap4a) hydrolase and other hit family
           hydrolases [uncultured Alteromonadales bacterium
           HF4000_16C08]
          Length = 279

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 35/157 (22%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G +   G FD  H GH  IL++  ++ +   + V +       IIQS      + P   +
Sbjct: 157 GRMYTSGCFDIFHQGHLNILKKTKQLCDYLIVGVSTDE----LIIQSKGRPPLI-PFEER 211

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
             ILE       +I                 ++ +V+   +  +  G+ ++ GK      
Sbjct: 212 ISILESNRYVDEVI-----------PQVDKNKQKVVDEYRIDAISVGSDWK-GK------ 253

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                      + +V  + +  + +  VSS+ ++  L
Sbjct: 254 -----------YPSVTCEMVYFDYTPNVSSTVLKRKL 279


>gi|254482199|ref|ZP_05095440.1| Cytidylyltransferase, putative [marine gamma proteobacterium
           HTCC2148]
 gi|214037524|gb|EEB78190.1| Cytidylyltransferase, putative [marine gamma proteobacterium
           HTCC2148]
          Length = 163

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 29/163 (17%)

Query: 18  KGGVVAIGN--FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           KG  +  GN  FD +H+GH   LE A  +     I V +      +I  + +   +++P 
Sbjct: 24  KGDTIVFGNGCFDLLHVGHVRYLEAAKSLGEVLVIAVNT----EASIATNENREPSINPC 79

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + +I+  +     ++        A+      + ++    ++ K    GT +       
Sbjct: 80  EERMEIIAALEAVDYVVPLN-----ASVP--IPLIELYRPHIQAK----GTDYTL----- 123

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            D+   +   E  G    F+        +  SS+ +R AL + 
Sbjct: 124 -DKMPERFAVEAGGGRIEFV-----GDEKTHSSTALRQALRER 160


>gi|209546757|ref|YP_002278675.1| pantoate--beta-alanine ligase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209538001|gb|ACI57935.1| pantoate/beta-alanine ligase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 300

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF +I+  +   + LK      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MRVFSSIDELRHTLDALKRQGRTVGLVPTMGY---LHAGHMELVSRARAEND---LVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L++ G + L    F    A+  A      V V 
Sbjct: 55  IFVNPLQFGPAEDLSKYPRDLERDSAMLKQAGVNFL----FAPGVADMYARPMKTVVDVP 110

Query: 115 WLE 117
            L 
Sbjct: 111 DLG 113


>gi|313890459|ref|ZP_07824088.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121161|gb|EFR44271.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 163

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 33/157 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+E+A  + +   + V  FNP  +                 + ++LE+
Sbjct: 10  GSFDPVTNGHMDIIERASHLFDRLYVGVF-FNPDKKGFF----------SLETRVRVLEE 58

Query: 85  --MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRG 138
                  +            S +  +   L + L+V  ++ G    T F +  +      
Sbjct: 59  ALAHLDNVFVV---------STQDSLAVDLAKELDVTHLVRGLRNPTDFEYESN------ 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            L+    +       +  +  N    +SSS ++  + 
Sbjct: 104 -LEYFNHRLEPSIDTLYFISRNIMSPISSSRVKELVH 139


>gi|294785019|ref|ZP_06750307.1| hypothetical protein
 gi|294486733|gb|EFG34095.1| [citrate (pro-3S)-lyase] ligase [Fusobacterium sp. 3_1_27]
          Length = 345

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 58/163 (35%), Gaps = 20/163 (12%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E+A    +   + ++S       F    + +I+ +  +  +      + I+  
Sbjct: 156 LGHQYLVEKASSENDILHLFIVSDDSSLVPFEVRKKLVIEGTKHLKNICYHETGDYIISS 215

Query: 85  MGF------SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             F        +         AN   E F +   V  L +     G +         ++ 
Sbjct: 216 ATFPSYFQKDEVAVI---ESQANLDIEVFTKIAKV--LNINRRYVGEEPNSLVTNIYNQT 270

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +L+K  E      + +   +   +  +S+S +R  +  G++ +
Sbjct: 271 MLKKLPE-NNIECIVVPRKKYLDNV-ISASTVRQIIKNGNLED 311


>gi|283853490|ref|ZP_06370732.1| pantoate/beta-alanine ligase [Desulfovibrio sp. FW1012B]
 gi|283571115|gb|EFC19133.1| pantoate/beta-alanine ligase [Desulfovibrio sp. FW1012B]
          Length = 287

 Score = 39.0 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 35/178 (19%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           + G V  +G+   +H GH  +L  A + A      V S   +P                 
Sbjct: 23  VTGLVPTMGS---LHAGHESLLRLARERAER---VVASIFVNPTQFGPGEDLAAYPRDLD 76

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---FR----- 128
               + E+ G   L    FT       A      V V  L  + +   ++   FR     
Sbjct: 77  RDAALAERAGVDVL----FTPAPEAMYAPGAATWVEVPAL-ARHLCGASRPTHFRGVCTI 131

Query: 129 --------------FGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNI 170
                         FG+       IL++     GF    +    +R      +SS N+
Sbjct: 132 VAKLFLLAQPTLAVFGQKDWQQLAILRRMVADLGFPVEIVGAPLVREADGLALSSRNV 189


>gi|315638050|ref|ZP_07893235.1| ATP-sulfurylase [Campylobacter upsaliensis JV21]
 gi|315481898|gb|EFU72517.1| ATP-sulfurylase [Campylobacter upsaliensis JV21]
          Length = 385

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 4   FHNIEINQSLPNHLKGGVVAI-GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           F+  E N+         + AI  +FD +H  H  I    I  A+   + V         +
Sbjct: 133 FYKQEFNRIKNARNAQKITAIVSSFDPLHRAHERIFRWTIDKAD---LVV---------V 180

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSAL---IRYKFTLETANYSAEQF---IQKVLVEWL 116
               S         ++EK L+    + L     + F L+  N         ++ ++ + L
Sbjct: 181 FLIESYEANGFEFELKEKYLQTFIQNYLPKECIFVFPLKNINIFHAHLNPGLESIIAKSL 240

Query: 117 EVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
               ++ G          D    + IL +  + YG  T+ + E +  ++ +++ S+ 
Sbjct: 241 GCTKLVVGQNHSGLGMFYDANQPKSILDEFSKDYGIETIILPEFVFCDQCKMIVSTR 297


>gi|297201420|ref|ZP_06918817.1| pantoate-beta-alanine ligase [Streptomyces sviceus ATCC 29083]
 gi|297147882|gb|EDY57862.2| pantoate-beta-alanine ligase [Streptomyces sviceus ATCC 29083]
          Length = 330

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 51/174 (29%), Gaps = 31/174 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+ +G    +H GH  ++  A +IA      V++   +P                  
Sbjct: 21  RAVVMTMG---ALHEGHATLVRTAREIAGPDGEVVVTVFVNPLQFGAGEDLDRYPRTLDA 77

Query: 78  QEKILEKMGFSALI------RYKFTLETANYSA---------------EQFIQKVLVEWL 116
             KI E  G  A+        Y         SA                  +  V+ + L
Sbjct: 78  DLKIAEDSGADAVFAPAADEVYPGGEPQVRISAGPMGERLEGTSRPGHFDGMLTVVAKLL 137

Query: 117 EVKTVITGTKFR-FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
            +           +G+  A    ++++      F      +  +R +    +SS
Sbjct: 138 HLTR----PDIALYGQKDAQQLALIRRMVRDLNFGVEIVGVPTVREDDGLALSS 187


>gi|289705867|ref|ZP_06502247.1| pantetheine-phosphate adenylyltransferase [Micrococcus luteus SK58]
 gi|289557410|gb|EFD50721.1| pantetheine-phosphate adenylyltransferase [Micrococcus luteus SK58]
          Length = 214

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 26/154 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD +H GH  ++ +A  +     + V            S+           +  
Sbjct: 61  AVCPGSFDPLHKGHVEVIARAANLFEEVVVAV-----------SSNPAKTYRFSVDERIA 109

Query: 81  ILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++E      + +             AE F +++  + + VK +  G    F         
Sbjct: 110 MIEATVSSLAGVAVRPMGP---GLLAE-FCRQIGADAI-VKGLRGGADLEF--------E 156

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                  ++      +    + +   VSSS I+ 
Sbjct: 157 APMAAMNRHLTGVETVYLPADARYTHVSSSLIKE 190


>gi|161507849|ref|YP_001577813.1| hypothetical protein lhv_1590 [Lactobacillus helveticus DPC 4571]
 gi|172048341|sp|A8YWC6|Y1590_LACH4 RecName: Full=UPF0348 protein lhv_1590
 gi|160348838|gb|ABX27512.1| hypothetical protein lhv_1590 [Lactobacillus helveticus DPC 4571]
          Length = 383

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  IA N PI V+         +Q       +     + K+  + G
Sbjct: 10  FNPFHSGHEFLLNQARLIAGNDPIVVV----MSGNYVQRGE--MAIMSKYQRAKVALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  +   I+++    L V  ++ G
Sbjct: 64  ADLVFETPFSTAVEPADLFSLGNIEQLA--KLGVTDLVFG 101


>gi|221133429|ref|ZP_03559734.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Glaciecola sp. HTCC2999]
          Length = 483

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 37/172 (21%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-----LSFNPHPRTIIQSSS 67
           L +  +  V+  G FD +H GH   L+ A ++ +   + V     ++       +     
Sbjct: 343 LQSQGQKVVMTNGCFDILHAGHVSYLQAAAQLGDRLIVAVNDDDSVT------RLKGPGR 396

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P+   +  + +  +L  +G         F  +    + +  I +VL +      ++ G  
Sbjct: 397 PV---NNVARRMAVLAGLGAVD--FVVPFGED----TPQSLIAEVLPD-----VLVKGGD 442

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +    + AG + +L       G     +     +  + VS++ I   +    
Sbjct: 443 YTI-DEIAGGKEVL-----ANGGEVKVM-----HFEEGVSTTAIIKQIVDTQ 483



 Score = 35.5 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
            L+R  F    A+   +  I+ V +   +   V+      + K    +   L    + + 
Sbjct: 124 QLLRLDFEESFASVDKQPLIEMVNMHIAKADVVVLSD---YAKGTLSNPQALIALAKAHN 180

Query: 149 FHTVFIDELRNNKSQIVSSSNIRTALTK 176
              V ID    + +    ++ I   + +
Sbjct: 181 VPVV-IDPKGTDFTPYSGATIITPNMAE 207


>gi|229132448|ref|ZP_04261302.1| Pantothenate synthetase [Bacillus cereus BDRD-ST196]
 gi|83316465|gb|ABC02406.1| PanC [Bacillus weihenstephanensis]
 gi|228651154|gb|EEL07135.1| Pantothenate synthetase [Bacillus cereus BDRD-ST196]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L         V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELHASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVTDFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+  +L +     A HL G     +  +  GE     +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNVYLSLEER--EEAPHLYGSLCIAKERIEAGECNPEII 223


>gi|260890640|ref|ZP_05901903.1| toxin-antitoxin system, antitoxin component, Xre family
           [Leptotrichia hofstadii F0254]
 gi|260859685|gb|EEX74185.1| toxin-antitoxin system, antitoxin component, Xre family
           [Leptotrichia hofstadii F0254]
          Length = 356

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +  G F  +H+GH   +++A     N  + V + +   + + +  S +  +     + + 
Sbjct: 6   IIFGKFYPLHIGHVDFIQRASGYVENLYVVVCTDDDRDKKLFE-DSKMKKMPTVKDRIRF 64

Query: 82  LEK-------MGFSALIR--YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +EK       +    L      F        +E+  + +L   ++V  + T  + +  K+
Sbjct: 65  VEKTFKHQKNIKIIHLAEDGIPFYPNGWKLWSERVQETLLKNKIKVDIIFT-NETQDVKN 123

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
              +   L    + +  +        N  +  +S++ IR 
Sbjct: 124 YKNNFLTLPNFEKTFNKNLEIKLIDINRNNFHISATEIRK 163


>gi|124513668|ref|XP_001350190.1| ethanolamine-phosphate cytidylyltransferase, putative [Plasmodium
           falciparum 3D7]
 gi|23615607|emb|CAD52599.1| ethanolamine-phosphate cytidylyltransferase, putative [Plasmodium
           falciparum 3D7]
          Length = 573

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 18/126 (14%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAI-GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
            ++  I+ N+ +       VV + G+FD  H+GH  ILE A K+ +   +       H  
Sbjct: 389 QIYQFIDNNELIKKKKNKKVVYVDGSFDIFHIGHLRILENAKKLGDYLLVG-----MHSD 443

Query: 61  TIIQ--SSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
            ++Q         +S       +L       ++            A   I +  ++   +
Sbjct: 444 EVVQKMKGKYFPVVSLLERTLNVLAMKVVDDVVI----------GAPWVITESFIKRFHI 493

Query: 119 KTVITG 124
             V+ G
Sbjct: 494 DVVVRG 499


>gi|242069793|ref|XP_002450173.1| hypothetical protein SORBIDRAFT_05g001470 [Sorghum bicolor]
 gi|241936016|gb|EES09161.1| hypothetical protein SORBIDRAFT_05g001470 [Sorghum bicolor]
          Length = 423

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 13/147 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     I  +  P    +P   +  ++  
Sbjct: 65  GCFDMMHYGHCNALRQARALGDELVVGVISDD----EIKANKGPPV--TPLHERMIMVRA 118

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E  N    ++    ++   +   +  GT       +AG     
Sbjct: 119 VKWVDDIIPDAPYAITEEFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAKKAG---RY 175

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSS 167
           ++     G  T  I        +  SS
Sbjct: 176 KQIKRTEGVSTTDIVGRMLLCVRERSS 202


>gi|239618020|ref|YP_002941342.1| pantoate/beta-alanine ligase [Kosmotoga olearia TBF 19.5.1]
 gi|239506851|gb|ACR80338.1| pantoate/beta-alanine ligase [Kosmotoga olearia TBF 19.5.1]
          Length = 288

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 41/200 (20%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V  + +  Q +   ++      G V  +G    +H GH  ++ QA    +N  +TV  
Sbjct: 1   MRVIESPKEMQKIAIDIEREEKSHGFVPTMGY---LHEGHLSLVRQAR--MDNVVVTVSI 55

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQ-EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           F    +     +           +   +L  +    +    F  +  +   + +   V+V
Sbjct: 56  FVNPTQ--FGPNEDYDRYPRDEERDLSLLRDLDVDYV----FIPKVEDMYPDNYSTYVIV 109

Query: 114 EWL-----------EVKTV--ITGTKF--------RFGKDRAGDRGILQKRGEKYGFHT- 151
           E L             K V  I    F         FG+  A    +L++      F   
Sbjct: 110 EDLTDVLCGARRPGHFKGVATIVAKLFNIVRPTKAYFGQKDAQQFRVLKRMARDLNFPVE 169

Query: 152 -VFIDELRNNKSQIVSSSNI 170
            V +  +R      +SS N+
Sbjct: 170 LVEMPIVREKDGLAMSSRNV 189


>gi|229166486|ref|ZP_04294242.1| Pantothenate synthetase [Bacillus cereus AH621]
 gi|228617060|gb|EEK74129.1| Pantothenate synthetase [Bacillus cereus AH621]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+      G V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQITNELRTSGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKETGVDYL----FYPNVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVTDFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+  +L +     A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNVYLSLEER--EEAPHLYSSLCIAKERIEAGERNPEII 223


>gi|222100466|ref|YP_002535034.1| Pantothenate synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572856|gb|ACM23668.1| Pantothenate synthetase [Thermotoga neapolitana DSM 4359]
          Length = 288

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   IE  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 9   MRIIETIEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARAEND---VVVVS 62

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LE+     +    +   +  + + +  E  + K
Sbjct: 63  IFVNPTQFGPNEDYERYPRDFERDRKLLERENVDCVFHPSVEEMYPPDFSTFVEETKLSK 122

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 123 PLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 182

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 183 IVREPDGLAMSSRNV 197


>gi|157165372|ref|YP_001467034.1| udp-N-acetylglucosamine--n-acetylmuramyl-
           (pentapeptide)pyrophosphoryl -undecaprenol
           n-acetylglucosamine transferase
           (undecaprenyl-PP-MurNAc-pentapeptide-udpglcnac
           glcnactransferase) [Campylobacter concisus 13826]
 gi|189028282|sp|A7ZE26|HLDE_CAMC1 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|112800051|gb|EAT97395.1| bifunctional protein HldE [Campylobacter concisus 13826]
          Length = 472

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 31/127 (24%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           K  V   G FD +H GH   L +A ++ +   + V+         + S + +  L     
Sbjct: 336 KKVVFTNGCFDILHAGHVKYLARARELGD---LLVVG--------LNSDASVKRLKGEAR 384

Query: 73  --SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +    +  +L  +G    ++   F  +    +    I K+     +   ++ G  ++ 
Sbjct: 385 PINSQDDRACVLSGLGFVDYVVI--FDED----TPLNLITKI-----KPDVLVKGADYK- 432

Query: 130 GKDRAGD 136
           GK+  G 
Sbjct: 433 GKEVVGS 439


>gi|292491421|ref|YP_003526860.1| rfaE bifunctional protein [Nitrosococcus halophilus Nc4]
 gi|291580016|gb|ADE14473.1| rfaE bifunctional protein [Nitrosococcus halophilus Nc4]
          Length = 483

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 26/158 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   LE A    +   I  ++ +   R +  +  P   L+    +  
Sbjct: 343 VMTNGCFDILHAGHVAYLEMAKCRGDRL-IVAVNDDASVRALKGNGRP---LNNIQRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     ++        +  + E+ I ++  + L     + G  +     +      
Sbjct: 399 VLAGLKSVDWVVP------FSEVTPERLICRIAPDLL-----VKGGDYT--PQKIAGYDC 445

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++      G       E+   +  + SS+ I    ++ 
Sbjct: 446 VKAA----GGEV----EVMGFEPGVSSSTIIERIRSEY 475


>gi|282850222|ref|ZP_06259601.1| pantoate--beta-alanine ligase [Veillonella parvula ATCC 17745]
 gi|282579715|gb|EFB85119.1| pantoate--beta-alanine ligase [Veillonella parvula ATCC 17745]
          Length = 280

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 72/229 (31%), Gaps = 31/229 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M     IE  ++  N  +     IG      F  +H GH  +++QA K  NN  + V  F
Sbjct: 1   MEFITTIENVRNTVNSWRKEGYTIGFVPTMGF--LHEGHAALIDQARK--NNDKVIVSIF 56

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLET---ANYSAEQ 106
              P    ++          +  +K+ E  G   +        Y+        A+ S   
Sbjct: 57  VN-PIQFGENEDLSTYPRDINSDKKLCESHGVDLIFSPNPEEMYQDKKAFVNIADLSDTL 115

Query: 107 FIQKVLVEWLEVKTVITGT-------KFRFGKDRAGDRGILQKRGEKYGFHT--VFIDEL 157
              +  + +  V TV+             FG+  A    I++K      F    + +  +
Sbjct: 116 CGIRRPIHFKGVCTVVAKFFNITQPTNAYFGEKDAQQLAIIRKMVFDLNFPVNIIGVPIV 175

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           R       SS   R          AA +L     + +  I      + +
Sbjct: 176 REKDGLAKSS---RNTYLSNEERKAATILYKAIQLGTQTIQYGCSAKCI 221


>gi|281413093|ref|YP_003347172.1| pantoate/beta-alanine ligase [Thermotoga naphthophila RKU-10]
 gi|281374196|gb|ADA67758.1| pantoate/beta-alanine ligase [Thermotoga naphthophila RKU-10]
          Length = 280

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   +E  +     ++      G V  +G    +H GH  ++ +A    +   + V+S
Sbjct: 1   MKIIETVEEMKKFSEEMREKKKTIGFVPTMGY---LHEGHLSLVRRARDEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL----IRYKFTLETANYSAEQFIQK 110
              +P     +              K+LEK     +    +   +  + + Y  E  + K
Sbjct: 55  IFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYPPDFSTYVEETKLSK 114

Query: 111 VLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L                     ++   +  FG+  A    +L++           I   
Sbjct: 115 HLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIECP 174

Query: 156 ELRNNKSQIVSSSNI 170
            +R      +SS N+
Sbjct: 175 IVREPDGLAMSSRNV 189


>gi|153940553|ref|YP_001389795.1| pantoate--beta-alanine ligase [Clostridium botulinum F str.
           Langeland]
 gi|189036418|sp|A7GAI5|PANC_CLOBL RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|152936449|gb|ABS41947.1| pantoate--beta-alanine ligase [Clostridium botulinum F str.
           Langeland]
 gi|295317883|gb|ADF98260.1| pantoate--beta-alanine ligase [Clostridium botulinum F str. 230613]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ + I+  + +    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    + V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLI----FNPETSEMYPNKIYSHINVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|108563266|ref|YP_627582.1| ADP-heptose synthase [Helicobacter pylori HPAG1]
 gi|118573569|sp|Q1CT14|HLDE_HELPH RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|107837039|gb|ABF84908.1| ADP-heptose synthase [Helicobacter pylori HPAG1]
          Length = 463

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 47/128 (36%), Gaps = 30/128 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++ ++L +H +  V   G FD +H GH   L++A  + +   I V+         + S +
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDLLHKGHASYLQKAKALGD---ILVVG--------LNSDN 368

Query: 68  PIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            I  L            +  +L  +     ++ ++                 L++ L+  
Sbjct: 369 SIKRLKGNKRPIVSEKDRAFLLASLSCVDYVVVFEEDAPIK-----------LIQALKPD 417

Query: 120 TVITGTKF 127
            ++ G  +
Sbjct: 418 ILVKGADY 425


>gi|3928|emb|CAA29702.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|3937|emb|CAA42726.1| ATP sulfurlase (ATP:sulfate adenylyltransferase) [Saccharomyces
           cerevisiae]
          Length = 521

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|313888568|ref|ZP_07822234.1| pantoate--beta-alanine ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845454|gb|EFR32849.1| pantoate--beta-alanine ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 277

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 30/193 (15%)

Query: 1   MHVFHNIEINQSLP----NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M V  N++              G V  +G    +H GH  ++++A     N+ I V+S  
Sbjct: 1   MKVLRNVQEALEFTKGNYQKSVGLVPTMGY---LHAGHKSLIDEAR---KNNDIVVVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN-----YSAEQFIQKV 111
            +P                    K+ E+ G  A+       E         + E     +
Sbjct: 55  VNPTQFGPGEDYESYPRDEERDFKLCEEAGVDAVFT-PDPKEFYQNHKTYVTIEDLKDNL 113

Query: 112 LVEWLEVK------------TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL-- 157
             +   +              +   T+  FG+  A    I++K      F    +     
Sbjct: 114 CGKTRPIHFRGVLTVLTKLFHIFRPTRAYFGRKDAQQFLIVKKAVGDLNFGIEIVPCPIK 173

Query: 158 RNNKSQIVSSSNI 170
           R      +SS N+
Sbjct: 174 REEDGLAISSRNV 186


>gi|269957371|ref|YP_003327160.1| cytidyltransferase-related domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269306052|gb|ACZ31602.1| cytidyltransferase-related domain protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 447

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD  H GH  ILE+A ++ ++  + V S  F+       +S   +        +
Sbjct: 4   VITYGTFDLFHDGHRRILERARELGDHLVVGVTSDAFD-------ESRGKLDVTQSVVER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + + + G    +I      E         +++ +              F  G D  G  
Sbjct: 57  IENVRRSGLADEIIV----EEYQGQKIRDIVERDI------------DIFTVGSDWIGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L +  E           +   +++ VSS+ +R 
Sbjct: 101 DYLGEYCEV----------VYLERTRGVSSTELRA 125


>gi|156845688|ref|XP_001645734.1| hypothetical protein Kpol_1043p67 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156116401|gb|EDO17876.1| hypothetical protein Kpol_1043p67 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 310

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 1  MHVFHNI-----EINQSLPNHLK---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
          M V H +        + + +  K   G V  +G    +H GH  +++ + +  +    TV
Sbjct: 1  MKVLHTVKEVVEWRTKEIGDRRKISVGFVPTMGC---LHQGHATLIKTSKQEND---FTV 54

Query: 53 LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
          +S   +P     +              K+LE +G   L 
Sbjct: 55 VSIFVNPSQFAPTEDLDQYPRTLPEDIKLLESLGVDMLF 93


>gi|90411896|ref|ZP_01219904.1| putative ADP-heptose synthase [Photobacterium profundum 3TCK]
 gi|90327154|gb|EAS43526.1| putative ADP-heptose synthase [Photobacterium profundum 3TCK]
          Length = 476

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V        ++     P   ++P   +  
Sbjct: 343 VMTNGCFDILHAGHVAYLTEAAKLGDRLIVAV----NSDSSVQGLKGPGRPVNPEDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++   FT E    + ++ I ++L        ++ G  ++
Sbjct: 399 VLAGLGAVDWVV--PFTEE----TPQRLISEIL-----PSLLVKGGDYK 436


>gi|148273870|ref|YP_001223431.1| putative bifunctional ADP-heptose synthase/transferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831800|emb|CAN02770.1| putative bifunctional ADP-heptose synthase/transferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 467

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH      A +   +  + +L+ +   R +     P   +    
Sbjct: 331 GGTVVATGGCFDLVHAGH-ARTLAAARALGDCLVVLLNSDDSVRRLKGPERP---IMTEE 386

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
            +  +L  +G    +        +  + E+ ++ + 
Sbjct: 387 DRVDLLMSLGVVDAVVL-----FSEDTPEEALRSIK 417


>gi|78189663|ref|YP_380001.1| pantoate--beta-alanine ligase [Chlorobium chlorochromatii CaD3]
 gi|123579345|sp|Q3APW7|PANC_CHLCH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|78171862|gb|ABB28958.1| pantothenate synthetase [Chlorobium chlorochromatii CaD3]
          Length = 290

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 60/222 (27%), Gaps = 41/222 (18%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  +    Q++  +++        V+ +G    +H GH   +        ++   +++
Sbjct: 1   MQIISDPHAMQAISENVRLQGKRLAVVMTMG---ALHEGH---ISLVTLARKSADTVIMT 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P              P        E  G   L    F   +A          V   
Sbjct: 55  LFVNPTQFSAGEDLERYPRPFEQDVAHAEAAGVDYL----FAPTSAEMYPAGHQTSVQCG 110

Query: 115 WL--------------EVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            L               V TV+T            FG+  A    I+++           
Sbjct: 111 ALAERFEGAHRSGHFNGVATVVTKLLHITKPHTAIFGEKDAQQLAIIRQLVADLLIDVEI 170

Query: 154 I--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           I    +R       SS NI   L+      A  L G     +
Sbjct: 171 IGAPIVREADGLAKSSRNI--YLSSNERKRATVLYGGLCHAK 210


>gi|28377193|ref|NP_784085.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           WCFS1]
 gi|28270024|emb|CAD62924.1| glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum
           WCFS1]
          Length = 134

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 32/156 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L++A  + +   + + +  FN        S       S    +
Sbjct: 4   VITYGTFDLLHYGHIELLKRAKSLGDYLIVALSTDEFN------WDSKQKKAYFSYEKRK 57

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
             +        +I           S +Q +    V+  ++   + G  +       G   
Sbjct: 58  ALLEAIRYVDLVIP--------EKSWDQKVSD--VKLYQIDRFVMGDDWT------GKFD 101

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            + ++ +      +++      ++  +S++ I+  L
Sbjct: 102 FVGEQTDA---EVIYLP-----RTPEISTTKIKQDL 129


>gi|57505828|ref|ZP_00371753.1| probable sulfate adenylyltransferase Cj1609 [Campylobacter
           upsaliensis RM3195]
 gi|57015858|gb|EAL52647.1| probable sulfate adenylyltransferase Cj1609 [Campylobacter
           upsaliensis RM3195]
          Length = 385

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 26  NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           +FD +H  H  I    I  A+   + V         +    S         ++EK L+  
Sbjct: 156 SFDPLHRAHERIFRWTIDKAD---LVV---------VFLIESYEANGFEFELKEKYLQTF 203

Query: 86  GFSAL---IRYKFTLETANYSAEQF---IQKVLVEWLEVKTVITGTKFR---FGKDRAGD 136
             + L     + F L+  N         ++ ++ + L    ++ G          D    
Sbjct: 204 IQNYLPKECIFVFPLKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHSGLGMFYDANQP 263

Query: 137 RGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           + IL +  + YG  T+ + E +  ++ +++ S+ 
Sbjct: 264 KSILDEFSKDYGIETIILPEFVFCDQCKMIVSTR 297


>gi|228920350|ref|ZP_04083696.1| Pantothenate synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839272|gb|EEM84567.1| Pantothenate synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIVTTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGFH 150
           E ++   V+ G                        +  FG   A    +++     +   
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPMRAYFGMKDAQQVAVIEGFVTDFNIP 167

Query: 151 TVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              +    +R       SS N+   L++     A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNV--YLSQDEREEALHLYRSLCIAKERIEAGERNPEII 223


>gi|325105526|ref|YP_004275180.1| pantoate/beta-alanine ligase [Pedobacter saltans DSM 12145]
 gi|324974374|gb|ADY53358.1| pantoate/beta-alanine ligase [Pedobacter saltans DSM 12145]
          Length = 279

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 18/126 (14%)

Query: 1   MHVFHN-IEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL 53
           M + H   EI + + N LK      G V  +G    +H GH  ++ Q+     N+ ITV 
Sbjct: 1   MKILHTKAEIGEEI-NRLKSKGLSVGLVPTMG---ALHQGHLSLISQSK---QNANITVA 53

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           S   +P         +    P     + LE +G   L    F  E +   A+  I    V
Sbjct: 54  SIFVNPTQFDNKDDLLNYPKPIEKDIQKLESIGCDVL----FNPEASEMYADNEIWNYEV 109

Query: 114 EWLEVK 119
             L+ K
Sbjct: 110 GDLDTK 115


>gi|302523144|ref|ZP_07275486.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces sp. SPB78]
 gi|302432039|gb|EFL03855.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces sp. SPB78]
          Length = 157

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 24/151 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S       +++ +     + P   + +I+  
Sbjct: 14  GAYDLFHIGHLNILRHAKSHCDYLVAGVVS-----DEMLEQAKGRRPMIPLVERLEIVRS 68

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +              ++      V +     +  G  +R         G  +   
Sbjct: 69  --VKYV-----DAAFVETVPDKVDTWKQVRF---DVLFKGDDWR---------GTPKGDK 109

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +  F  V +D +    +   SS+ +R AL 
Sbjct: 110 LERDFAAVGVDIVYFPYTVHTSSTQLRRALD 140


>gi|212550463|ref|YP_002308780.1| phosphopantetheine adenylyltransferase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548701|dbj|BAG83369.1| pantetheine-phosphate adenylyltransferase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
          Length = 147

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 23/159 (14%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +K   V  G FD   +GH  ++E+ +++ +   I  +  NPH +T    +  I  +S   
Sbjct: 1   MKKTAVFPGTFDPFTIGHLSLVERGLQLVDEI-IVAIGINPHKKTFFSLNQRIEAISKLF 59

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            Q+  ++   +  L     T++ A     QFI +       ++++     F + K+ A  
Sbjct: 60  GQDHRIKTKYYDCL-----TVDFAKSVGAQFILR------GIRSI---YDFEYEKNIADV 105

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
                   +  G  T  +      +   +SS+ +R  L 
Sbjct: 106 ------NRKISGIETFVL--FTEPEHTHISSTIVRELLA 136


>gi|146084164|ref|XP_001464945.1| cholinephosphate cytidylyltransferase A [Leishmania infantum JPCM5]
 gi|134069040|emb|CAM67185.1| putative cholinephosphate cytidylyltransferase A [Leishmania
           infantum JPCM5]
 gi|322498364|emb|CBZ33438.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 589

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 43/153 (28%), Gaps = 22/153 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH  ++  A+K  N   + V               P   +     +      
Sbjct: 442 GVFDLCHAGHKKLMANALKFGNRLIVGVCGDE----ECASYKRPP--IMTTEER------ 489

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              + +   K+  E    S    I   ++ +  +  V+ G ++                 
Sbjct: 490 --INEVRLCKYVSEVIPNSPVTGITAEMIRYYNIHVVVCGEEYNT------PTDTYYAVP 541

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            + G           + S ++S   IR A    
Sbjct: 542 RRMGILRTVPRTPGISTSVLIS--RIRAASDSS 572


>gi|238928045|ref|ZP_04659805.1| cytidyltransferase family protein [Selenomonas flueggei ATCC 43531]
 gi|238884005|gb|EEQ47643.1| cytidyltransferase family protein [Selenomonas flueggei ATCC 43531]
          Length = 514

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 25/217 (11%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +++ Q+  +  K  V+  G FD +H GH   +E   +      I V+S            
Sbjct: 13  LKLRQTFRDAGKKVVLCHGVFDLLHYGH---IEHLEEAKKQGDILVVSVTAAKYVNKGPG 69

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P F       +   L  +     ++            +E      +V++++      G 
Sbjct: 70  RPYF---DDRQRMAFLASLEMVDYVLL-----------SEAVTVHEIVDFVQPDIYAKGQ 115

Query: 126 KFRFGKDR-AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
           ++   +D   G+ G  Q   EKYG        +   + ++ SS+ +          N   
Sbjct: 116 EYARAEDDVTGNIGAEQSVVEKYGGR------IFFTQGEVHSSTKLLNNFFAALPENVKE 169

Query: 185 LLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
           +              +  G    F    + +  D+++
Sbjct: 170 MAFSLRKKHGTDAFAQVRGTVERFSDTKVLVVGDVII 206


>gi|220911350|ref|YP_002486659.1| rfaE bifunctional protein [Arthrobacter chlorophenolicus A6]
 gi|219858228|gb|ACL38570.1| rfaE bifunctional protein [Arthrobacter chlorophenolicus A6]
          Length = 486

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 33/145 (22%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIF 70
            G VVA G  FD +H GH   L  A K+ +      NS  +V       R +     PI 
Sbjct: 350 GGTVVATGGCFDLLHAGHVRSLAAARKLGDCLIVCLNSDSSV-------RRLKGPERPI- 401

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
            +S     E +L      A++   F  +    + E  +     + L     + G  ++  
Sbjct: 402 -ISQQDRAELLLAMECVDAVMV--FDED----TPEAAL-----DRLRPDLWVKGGDYK-- 447

Query: 131 KDRAGDRGILQKRGEKYGFHTVFID 155
               G R    +  E +G   V + 
Sbjct: 448 ----GSRLPEAELVESWGGRCVTVP 468


>gi|260907148|ref|ZP_05915470.1| pantothenate synthetase [Brevibacterium linens BL2]
          Length = 283

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 41/161 (25%), Gaps = 30/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++++A +  +     V S   +P              P     ++ E  G   
Sbjct: 29  LHSGHQALMDRARESGD---SVVTSIFVNPLQFGTDEDFFQYPRPFEADLEVCEAAGVDF 85

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKT-------------VITGTKFR-------- 128
           +    F               V    +                  +    F         
Sbjct: 86  V----FAPALGEMYPSAPEVTVSSGRMGAVYEGAARPGHFDGVLTVVAKLFTLTAPDSAV 141

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
           FG        ++++      F    I    +R++    +SS
Sbjct: 142 FGLKDIQQFCLVKRLISDLNFDIELIGLPVVRDDDGLAMSS 182


>gi|118350194|ref|XP_001008378.1| cytidyltransferase-related domain containing protein [Tetrahymena
           thermophila]
 gi|89290145|gb|EAR88133.1| cytidyltransferase-related domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 454

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 59/218 (27%), Gaps = 33/218 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   + QA +      + V+      +  I        LS    +  I + 
Sbjct: 89  GCFDLMHSGHFNAIRQAKQYCETLVVGVI-----AQEEITKRKGPPVLS-YEERVGIAKA 142

Query: 85  MGF-SALIRY-KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR----- 137
             +   +  +  +                L++ L    V  G     G D          
Sbjct: 143 CKWADEICEHAPYDPTI-----------ELIDRLNCSHVAHGDDMIVGPDGCDAYSPFKI 191

Query: 138 -GILQKRGEKYGFHTVFID---ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
              +       G  T  I     L     Q +    IR    +  +  +        T  
Sbjct: 192 SNRMITFKRTEGISTTDIVGRLLLMTKNQQSIEIKKIRKLSGEQGITASKIESLENTTNI 251

Query: 194 SDVIHGEKIGRTLGFPTANMQL--SPDILLKEG---VY 226
            +V     +   L   T  ++     +   KEG   VY
Sbjct: 252 KEVDESTAVKLKLLNTTKRIRQFSQGNREPKEGDKIVY 289


>gi|283851994|ref|ZP_06369269.1| rfaE bifunctional protein [Desulfovibrio sp. FW1012B]
 gi|283572544|gb|EFC20529.1| rfaE bifunctional protein [Desulfovibrio sp. FW1012B]
          Length = 503

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 41/163 (25%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI------- 77
           G FD +H GH  +L +A    +   +            + + + +  L  P+        
Sbjct: 367 GCFDLLHPGHASVLARARAKCDRLIVG-----------LNTDASVKRLKGPTRPVQDQAA 415

Query: 78  QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + ++L  +    A++   F  +    +    I+ V  + L  K    G  +        D
Sbjct: 416 RARMLASLASVDAVVL--FDED----TPLDLIRAVRPDML-AK----GGDYTLATVVGAD 464

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
                     YG     ID          S+++I   + +  V
Sbjct: 465 ------LVRSYGGRVELIDL-----EGEASTTDIIRRIRQADV 496


>gi|219853102|ref|YP_002467534.1| phosphopantetheine adenylyltransferase [Methanosphaerula palustris
           E1-9c]
 gi|219547361|gb|ACL17811.1| cytidyltransferase-related domain protein [Methanosphaerula
           palustris E1-9c]
          Length = 152

 Score = 38.6 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQEKI- 81
           G FD +H GH  +L ++ ++A      ++  + +      +    P         +E++ 
Sbjct: 7   GTFDPLHDGHKRLLSRSFQLAGPKGTVIIGLTSDRFASQKVHPVRPY-----EKRKEELT 61

Query: 82  --LEKMGFSALIRYKFTLETANYSAEQFIQKVLVE-WLEVKTVITGTKFRFGKDRAGDRG 138
             +E+ GF            A +S E    +      ++   +I   +       A +  
Sbjct: 62  RFIEESGFQ-----------AAWSVEPLEDRFGSALKIDFDALIVSEETL---PVAMEIN 107

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            L+++  +       I  +  +  + +SS+ I
Sbjct: 108 TLRRKEGRRKVDIHQITCVLADDGRWISSTRI 139


>gi|328949771|ref|YP_004367106.1| Pantothenate synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450095|gb|AEB10996.1| Pantothenate synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 271

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 63/214 (29%), Gaps = 52/214 (24%)

Query: 11  QSLPNHLKGGVV----AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           Q L   L+G  V     +G    +H GH  ++ +A +        V+S   +P     + 
Sbjct: 2   QDLRAALEGAEVGFVPTMGY---LHEGHLSLVRRAREEN---GTVVVSVFVNPLQFGPNE 55

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV------------- 113
                        ++    G   L    F  E A    E F  +V++             
Sbjct: 56  DYQRYPRDLERDARLARAAGADLL----FAPEVAEVYPEGFATRVVLTGGLVERWEGAHR 111

Query: 114 --EWLEVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKS 162
              +  V TV+          +  FG+       ++++      F    V +  +R    
Sbjct: 112 PGHFDGVATVVAKLFNMVRPRRAYFGEKDYQQLQVIRRLVRDLNFPVEVVGVPTVREPDG 171

Query: 163 QIVSSSNI--------------RTALTKGHVLNA 182
             +SS N+              R  +    V  A
Sbjct: 172 LALSSRNVYLTPERRAQATVLYRALVAARRVAEA 205


>gi|315302607|ref|ZP_07873417.1| glycerol-3-phosphate cytidylyltransferase [Listeria ivanovii FSL
           F6-596]
 gi|313629024|gb|EFR97347.1| glycerol-3-phosphate cytidylyltransferase [Listeria ivanovii FSL
           F6-596]
 gi|313638395|gb|EFS03598.1| glycerol-3-phosphate cytidylyltransferase [Listeria seeligeri FSL
           S4-171]
          Length = 127

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +LE+A  + +   + + +                       ++ 
Sbjct: 4   VITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDE------FNRIKHKEAYHNFEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  +       G+  
Sbjct: 58  ILEAIRYVDEVI-----------PESNWEQKLEDVQSRDIDVFVMGDDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S+S I+  L
Sbjct: 101 FLKPYC-----EVVYLP-----RTDGISTSKIKDDL 126


>gi|157151694|ref|YP_001449954.1| phosphopantetheine adenylyltransferase [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|189082596|sp|A8AVZ4|COAD_STRGC RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|157076488|gb|ABV11171.1| pantetheine-phosphate adenylyltransferase [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 164

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 43/151 (28%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMTKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERIVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +            +++  +   +   L  K  + G +     D   D        
Sbjct: 61  QHLDNVEVI---------TSQNELAVTVARRLGAKAFVRGLRNSQDLDYEADMTF---FN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +       I  L     Q +SSS IR  + 
Sbjct: 109 RELAGELETIFLLSKPAYQHISSSRIRELIA 139


>gi|9937240|gb|AAG02371.1|AF210249_31 sugar synthase BlmC [Streptomyces verticillus]
          Length = 498

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 30/159 (18%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L +A ++ +   + V S +   R +     P+    P + 
Sbjct: 355 RRVVFTNGCFDLLHGGHVSCLSRAKELGDLLVVGVNS-DASVRRLKGPRRPVI---PLAE 410

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + ++L  +      +   F  +    S    I+ +  E              + K     
Sbjct: 411 RMRVLAALSCVD--LVVPFDDD----SPAALIEALRPE-------------VYAKGGDYT 451

Query: 137 RGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              L +    ++ G     +  + +  +  +    IR  
Sbjct: 452 LATLPEAPLVQRLGGVVHLLPSVADTSTTDI----IRRI 486


>gi|294675085|ref|YP_003575701.1| pantoate--beta-alanine ligase [Prevotella ruminicola 23]
 gi|294472793|gb|ADE82182.1| pantoate--beta-alanine ligase [Prevotella ruminicola 23]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 64/211 (30%), Gaps = 40/211 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIG-----NFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M V   ++  + +    +   + +G      F  +H GH  ++ ++    + + ++V   
Sbjct: 1   MKVVKTVKEVREIVAGWRKEGLTVGLVPTMGF--LHEGHQSLIRKSASQNDRTVVSVFV- 57

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL--- 112
             +P     +          +   + +E+ G + +    F  E A      F   +    
Sbjct: 58  --NPIQFGPNEDLEAYPRDLNRDMQKVEEAGGNLI----FNPEPAEMYPGHFTSFIDTTE 111

Query: 113 --------VEWLEVKTV--ITG--------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
                   V  +  + V  + G         +  FG+  A     +++      F    +
Sbjct: 112 TTELLCGAVRPVHFRGVCTVVGKLFNIVCPDRAYFGQKDAQQLATVKRFVRDLNFPVEIV 171

Query: 155 DE--LRNNKSQIVSSSNIRTALTKGHVLNAA 183
               +R +     SS   R          AA
Sbjct: 172 PCPIVREDDGLAKSS---RNTYLNADERQAA 199


>gi|293337205|ref|NP_001170703.1| hypothetical protein LOC100384780 [Zea mays]
 gi|238007042|gb|ACR34556.1| unknown [Zea mays]
          Length = 424

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 13/147 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     I  +  P    +P   +  ++  
Sbjct: 66  GCFDMMHYGHCNALRQARALGDELVVGVISDD----EIKANKGPPV--TPLHERMIMVRA 119

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E  N    ++    ++   +   +  GT       +AG     
Sbjct: 120 VKWVDDIIPDAPYAITEEFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAKKAG---RY 176

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSS 167
           ++     G  T  I        +  SS
Sbjct: 177 KQIKRTEGVSTTDIVGRMLLCVRERSS 203


>gi|225439047|ref|XP_002265169.1| PREDICTED: similar to Os11g0123400 isoform 1 [Vitis vinifera]
 gi|239056178|emb|CAQ58612.1| Ethanolamine-phosphate cytidylyltransferase [Vitis vinifera]
          Length = 421

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 21/146 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P    +P + +  ++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEITANKGPPV--TPLNERMIMVS- 114

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +         A    E F++K+  +   +  +I G       D      + +K G
Sbjct: 115 -GVKWVDEVIPDAPYAIT--EDFMKKLF-DEYNIDYIIHGDDPCILPDGTDAYALAKKAG 170

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNI 170
                           +++ VSS++I
Sbjct: 171 RYKQIK----------RTEGVSSTDI 186


>gi|224069032|ref|XP_002326258.1| predicted protein [Populus trichocarpa]
 gi|222833451|gb|EEE71928.1| predicted protein [Populus trichocarpa]
          Length = 362

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 31/160 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       II +  P    +P   +  ++  
Sbjct: 3   GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEIIANKGPPV--TPLHERMIMVNA 56

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T E      +++          +  +I G       D      + 
Sbjct: 57  VKWVDEVISDAPYAITEEFMKKLFDEY---------NIDYIIHGDDPCVLPDGTDAYALA 107

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +K G                +++ VSS++I  R  L    
Sbjct: 108 KKAGRYKQIK----------RTEGVSSTDIVGRMLLCTRE 137


>gi|88601917|ref|YP_502095.1| phosphopantetheine adenylyltransferase [Methanospirillum hungatei
           JF-1]
 gi|88187379|gb|ABD40376.1| Cytidyltransferase-related protein [Methanospirillum hungatei JF-1]
          Length = 169

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 45/191 (23%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G FD +H GH L++ +A  +A      ++  + +    +     S          ++   
Sbjct: 7   GTFDPLHDGHRLLIRRAFDLATPEGTVIIGLTSD----SFANRKSHPIHSYADRYRD--- 59

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT----------VITGTK-FRFGK 131
                       F     +   E   +   +E L  +           ++   + F  GK
Sbjct: 60  ---------LVSF---IKSLEPETTWE---IEELHDQYGSTLDADFDALVVSEETFPVGK 104

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI-RTALTKGHVLNAAHLLGYRF 190
               +    ++   K       I  +     + +SS+ I R  +          L+  + 
Sbjct: 105 ----NINQKRRERGKPCVEIHMIRCVLAEDGRWISSTRIWRGEIDTH-----GRLIQQQP 155

Query: 191 TIESDVIHGEK 201
             E       +
Sbjct: 156 QKEGSSDDMRR 166


>gi|240112547|ref|ZP_04727037.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae MS11]
 gi|240125379|ref|ZP_04738265.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae SK-92-679]
 gi|240127834|ref|ZP_04740495.1| pantoate--beta-alanine ligase [Neisseria gonorrhoeae SK-93-1035]
 gi|268598616|ref|ZP_06132783.1| pantothenate synthetase [Neisseria gonorrhoeae MS11]
 gi|268683981|ref|ZP_06150843.1| pantothenate synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268686232|ref|ZP_06153094.1| pantothenate synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268582747|gb|EEZ47423.1| pantothenate synthetase [Neisseria gonorrhoeae MS11]
 gi|268624265|gb|EEZ56665.1| pantothenate synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268626516|gb|EEZ58916.1| pantothenate synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 278

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 14/135 (10%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I   ++   +         +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIRELRTWRENTGKVAFVPTMGN---LHEGHLALVREARKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
                Q                 L   G + +    F  +          Q+  VE   +
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLAAEGVAVV----FAPDEKELYP-NVEQRYNVEPPHL 109

Query: 119 KTVITGTKFRFGKDR 133
           +  + G  FR G  R
Sbjct: 110 QNELCGK-FRPGHFR 123


>gi|222150901|ref|YP_002560054.1| teichoic acid biosynthesis protein TagD [Macrococcus caseolyticus
           JCSC5402]
 gi|222120023|dbj|BAH17358.1| teichoic acid biosynthesis protein TagD [Macrococcus caseolyticus
           JCSC5402]
          Length = 129

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 31/154 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L +A ++     I  LS +              +      ++ 
Sbjct: 4   VITYGTFDLLHYGHIELLRRAKELGEYL-IVGLSSDE-----FNKLKNKKSYYNYEQRKM 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE + +  L+  +          EQ ++ V +  +          F  G D  G+   L
Sbjct: 58  MLESIRYVDLVIKEEN-------WEQKVKDVTLYEI--------DTFLMGSDWKGEFDYL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +   E           +   +++ +S++ I+  L
Sbjct: 103 KDYCEV----------VYLERTEGISTTQIKKEL 126


>gi|206890027|ref|YP_002248072.1| bifunctional protein HldE [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741965|gb|ACI21022.1| bifunctional protein HldE [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 332

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 20/131 (15%)

Query: 2   HVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
            + H +++   + N  K G   V   G FD IH+GH   L++A K+ +   I V+  N  
Sbjct: 3   KIVHAMKLKNEIDNLKKQGNKIVFTNGCFDIIHVGHVRYLKEAKKLGD---ILVIGLNSD 59

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
               ++   P+  ++P + + ++L  +     +    F  E             L+++LE
Sbjct: 60  KS--VKKIKPLRPINPENERAEVLSSLEMVDFVTF--FDEE---------TPYNLIKFLE 106

Query: 118 VKTVITGTKFR 128
              ++ G  ++
Sbjct: 107 PDVLVKGGDWK 117


>gi|332534452|ref|ZP_08410291.1| glycerol-3-phosphate cytidylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036105|gb|EGI72581.1| glycerol-3-phosphate cytidylyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 141

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 28/161 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL++A    +   + + +       + +S+     + P   + +I+
Sbjct: 7   TTGVFDLFHIGHLNILKRAKLECDYLIVGITT-----DELSKSAKNKEPVIPFQERMEIV 61

Query: 83  EKMG-FSALI-RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           E +     ++ +  +  E      E +        L+   +  G  ++         G  
Sbjct: 62  EAIKFVDEVVPQVNYDKE------EAW------NNLKFDKMFVGDDWK---------GTD 100

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           +    +  F    ++    + +   SS+ +R  L K     
Sbjct: 101 KWNQIEADFKKFNVEICYFSYTSHTSSTKLRNVLDKICSAK 141


>gi|229000066|ref|ZP_04159637.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides
           Rock3-17]
 gi|229007585|ref|ZP_04165180.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides
           Rock1-4]
 gi|228753723|gb|EEM03166.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides
           Rock1-4]
 gi|228759750|gb|EEM08725.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides
           Rock3-17]
          Length = 131

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + V S                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKDLGDYLIVAVSSDE------FNKLKNKKSYHSYENRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QKV  V+  +V   + G  ++      G+  
Sbjct: 58  ILEAVRYVDEVI-----------PEHNWEQKVKDVQSRDVDVFVMGDDWK------GEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L++         V++      ++  +S++ I+  L
Sbjct: 101 FLEEHC-----EVVYLP-----RTAGISTTKIKKEL 126


>gi|328866075|gb|EGG14461.1| phosphoethanolamine-cytidyltransferase [Dictyostelium fasciculatum]
          Length = 363

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA ++ +   + V     H    I  +           + K +  
Sbjct: 22  GCFDLMHFGHANALRQARELGDILVVGV-----HTDAEIAKNKGPPV-MNEQERYKAVRA 75

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                    K+  E A  +      ++ ++ L     + G     G D       ++K G
Sbjct: 76  C--------KWADEVAEGAPYTATVEL-LDQLNCDFCVHGEDISVGADGKDVYETIKKSG 126

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +               +++ +S++ +  R  L    
Sbjct: 127 KFRFIK----------RTEGISTTELVGRMLLLTKD 152


>gi|323451795|gb|EGB07671.1| hypothetical protein AURANDRAFT_2800 [Aureococcus anophagefferens]
          Length = 357

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 48/158 (30%), Gaps = 21/158 (13%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS-PIFTL 72
           P      V   G FD  H GH   LE A  + +   + V     H   ++       F +
Sbjct: 191 PAPGAAVVYVAGAFDLFHAGHVAFLEAARGLGDYLVVGV-----HGDAVVAKKRGDAFPV 245

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
                +   L  +G   +    F            + + +V+  ++  V    +      
Sbjct: 246 MNMQERA--LSVLGCRFVDDCLFDAPL-------HVSETMVQSFKITVVAVAARGPDAAR 296

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             GDR       +K G  T        +    +SS+ I
Sbjct: 297 PDGDRDDPFAVPKKLGLFTTV------DSGSDLSSTKI 328


>gi|326328771|ref|ZP_08195107.1| glycerol-3-phosphate cytidyltransferase [Nocardioidaceae
          bacterium Broad-1]
 gi|325953393|gb|EGD45397.1| glycerol-3-phosphate cytidyltransferase [Nocardioidaceae
          bacterium Broad-1]
          Length = 131

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 17 LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
          +   VV  G FD  H+GH  I+E+A ++ +   + V
Sbjct: 1  MSRTVVTFGTFDVFHVGHLRIIERAAELGDRLVVGV 36


>gi|294669385|ref|ZP_06734464.1| pantoate--beta-alanine ligase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308795|gb|EFE50038.1| pantoate--beta-alanine ligase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 278

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M + H ++  +       G V     +GN   +H GH  ++ +A K A N    V+S   
Sbjct: 1   MQIIHTVQALREW-RKTAGTVAFVPTMGN---LHEGHLALVREAKKRAGN---VVVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQ 106
           +     Q                 L   G   +           +  ++ +E  +   E 
Sbjct: 54  NRLQFGQGEDFDRYPRTLQQDADKLAGEGVVVVFAPDEKELYPNVEQRYNVEPPHLQNEL 113

Query: 107 FIQKVLVEWLEVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYGF--HTVFIDEL 157
             +     +  V TV+          +  FGK       ++Q   E   F    V +D  
Sbjct: 114 CGKFRPGHFRGVATVVSKLFNIVQPNYACFGKKDYQQLAVIQGLTEDLNFNIEIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R +    +SS N    L++     A  L 
Sbjct: 174 RASDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|251798627|ref|YP_003013358.1| cytidyltransferase [Paenibacillus sp. JDR-2]
 gi|247546253|gb|ACT03272.1| cytidyltransferase-related domain protein [Paenibacillus sp.
          JDR-2]
          Length = 341

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 12/64 (18%)

Query: 22 VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
          + +G F   H GH  ++E A++  ++  + +              SP  T  P S++ + 
Sbjct: 8  LTLGKFAPFHRGHQHVVETALREVDHLIVVIY------------DSPEVTPVPLSVRARW 55

Query: 82 LEKM 85
          + K+
Sbjct: 56 IRKL 59


>gi|54295502|ref|YP_127917.1| hypothetical protein lpl2589 [Legionella pneumophila str. Lens]
 gi|81601189|sp|Q5WTD6|PANC_LEGPL RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|53755334|emb|CAH16830.1| hypothetical protein lpl2589 [Legionella pneumophila str. Lens]
          Length = 252

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 1   MHVFHNIEI-----NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +FHN+       N   P+   G    +GN   +H GH  +    +  +  +  TV S 
Sbjct: 1   MQIFHNLNEWIRFRNSLSPDLSLGFAPTMGN---LHAGHASLF---LASSKENHYTVSSL 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P                    +++ + G    I        A+  A Q  +    + 
Sbjct: 55  FVNPTQFNNPDDYKHYPRTVDADLELMTQNGVDFCILPNENEIYADGYAYQVQENRFGQL 114

Query: 116 LEVKT 120
           +E K 
Sbjct: 115 MEGKH 119


>gi|297159351|gb|ADI09063.1| pantoate--beta-alanine ligase [Streptomyces bingchenggensis BCW-1]
          Length = 307

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/170 (10%), Positives = 41/170 (24%), Gaps = 29/170 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A        +  ++   +P                    +
Sbjct: 41  VMTMG---ALHEGHASLIRAARARVGAKGVVTVTVFVNPLQFGAGEDLDRYPRTLDADLE 97

Query: 81  ILEKMGFSALIRYKFTLETANYSAE---------------------QFIQKVLVEWLEVK 119
           +    G   +                                      +  V+ + L + 
Sbjct: 98  VAAAAGADIVFAPPVEEVYRGGEPRVRMTAGDMGERYEGASRPGHFDGVLTVVAKLLHLT 157

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
                    FG+  A    ++++      F    +    +R      +SS
Sbjct: 158 RPDVAF---FGEKDAQQLAVIRRMVLDLDFPVEIVGAPTVREIDGLALSS 204


>gi|238062291|ref|ZP_04607000.1| bifunctional LPS biosynthesis protein rfaE [Micromonospora sp. ATCC
           39149]
 gi|237884102|gb|EEP72930.1| bifunctional LPS biosynthesis protein rfaE [Micromonospora sp. ATCC
           39149]
          Length = 619

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   LEQA  + +   +  ++ +   R +     P+   +P   
Sbjct: 455 RSVVFTNGCFDVLHPGHVRYLEQARALGD-LLVVAVNSDGSVRRLKGPDRPV---NPVED 510

Query: 78  QEKILEKMG-FSALIRYKFT 96
           +  +L  +     ++ ++  
Sbjct: 511 RVALLAALACVDHVVIFEED 530


>gi|71279534|ref|YP_270855.1| glycerol-3-phosphate cytidyltransferase [Colwellia psychrerythraea
           34H]
 gi|71145274|gb|AAZ25747.1| glycerol-3-phosphate cytidyltransferase [Colwellia psychrerythraea
           34H]
          Length = 131

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 57/159 (35%), Gaps = 30/159 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D  H+GH  I+E+A    ++  + V   +     I +   P   +     ++ 
Sbjct: 3   VITFGTYDIFHVGHVNIIERARLHGDHLIVGV---SSDKLNIAKKGRPP--IYCEDDRQH 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I+  M     +   F  E+    A+       +++     ++ G  +       G    L
Sbjct: 58  IIRSM---RCVDEVFLEESLELKAD------YIKYYNADILVMGDDW------QGKFDHL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           +   +      +++      ++  VS++ I   +    +
Sbjct: 103 KDICQ-----VIYLP-----RTPSVSTTEIIEVVKTKRL 131


>gi|223932240|ref|ZP_03624244.1| protein of unknown function DUF795 [Streptococcus suis 89/1591]
 gi|330832212|ref|YP_004401037.1| hypothetical protein SSUST3_0385 [Streptococcus suis ST3]
 gi|223899221|gb|EEF65578.1| protein of unknown function DUF795 [Streptococcus suis 89/1591]
 gi|329306435|gb|AEB80851.1| protein of unknown function DUF795 [Streptococcus suis ST3]
          Length = 362

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +LEQA        I V+S        +Q   P   +     + ++  + G   
Sbjct: 12  FHTGHKYLLEQA----EGLKIVVMS-----GNFMQRGEPA--IVDKWTRAQMALEHGADL 60

Query: 90  LIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++   F +     SA+ F +    ++  L V+ ++ GT+      +  D 
Sbjct: 61  VVEMPFLVSV--QSADHFAKGAISILHKLGVEKLVFGTEEMLDYQKIADI 108


>gi|154250246|ref|YP_001411071.1| pantoate--beta-alanine ligase [Fervidobacterium nodosum Rt17-B1]
 gi|189036421|sp|A7HND1|PANC_FERNB RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|154154182|gb|ABS61414.1| pantoate--beta-alanine ligase [Fervidobacterium nodosum Rt17-B1]
          Length = 280

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 29/208 (13%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++++A +  +   I V+S   +P     +             
Sbjct: 25  GFVPTMGY---LHEGHLSLVKKAREDND---IVVVSIFVNPTQFGPNEDFNRYPRDLERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--EVKT---------------- 120
            ++LE +    +  Y    E    +   ++ +V +       K                 
Sbjct: 79  LRLLEPLNVDYVF-YPSVEEMYPKNYSVYVDEVELSKYLCGAKRPGHFRGVCTVVTKLFN 137

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALTKGH 178
           ++  T+  FG+  A    IL++  +        I    +R +    +SS N+   L +  
Sbjct: 138 IVKPTRAYFGQKDAQQFRILRRMVQNLNMDVEMIEMPIVRESDGLAMSSRNV--YLNEEE 195

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              A  L       +  +  GE+    +
Sbjct: 196 RKEATRLHKSLLKAKELIESGERDVSKI 223


>gi|116492913|ref|YP_804648.1| phosphopantetheine adenylyltransferase [Pediococcus pentosaceus
           ATCC 25745]
 gi|122265623|sp|Q03F16|COAD_PEDPA RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|116103063|gb|ABJ68206.1| Phosphopantetheine adenylyltransferase [Pediococcus pentosaceus
           ATCC 25745]
          Length = 158

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +G+FD I  GH  I+++A KI +     V++ N +   +      +  ++  +   + + 
Sbjct: 7   VGSFDPITNGHLDIIKRAAKIFDEL-TVVVAINTNKSALFTPQERVNLITQVTRDLENVA 65

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
               + L    FT E A+                V+ V  G    F    AG    L + 
Sbjct: 66  CKSVTGLTAETFTQEKADVL--------------VRGVRNGEDLNFEIQVAGMNQYLNQ- 110

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                  TVFI    N+K +  SSS I+  +
Sbjct: 111 ----EVETVFIPA--NSKWEFTSSSLIKEVV 135


>gi|254823641|ref|ZP_05228642.1| tagD [Listeria monocytogenes FSL J1-194]
 gi|255521265|ref|ZP_05388502.1| hypothetical protein LmonocFSL_08585 [Listeria monocytogenes FSL
           J1-175]
 gi|293592864|gb|EFG00625.1| tagD [Listeria monocytogenes FSL J1-194]
          Length = 127

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-IVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E   ++    +E   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PENNWEQKREDIEKYGIDVFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L++         V++      +++ +S+S I+  L
Sbjct: 100 DFLKEVC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|56784959|dbj|BAD82489.1| unknown protein [Oryza sativa Japonica Group]
          Length = 250

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 33/194 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V+H    + S+  +    ++  G+F+ +H GH  +LE A  + ++       F     
Sbjct: 64  MKVYH---FSDSMDKNFNRKIILPGSFNPLHDGHLRLLEVASSMCDDGLPC---FE---I 114

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWL 116
           + I +  P  +++    + +   K+G + +I    +  + A     SA           +
Sbjct: 115 SAINADKPPLSIAEIKRRVEQFRKVGKNVIISNQPYFYKKAELFPGSAFVIGADTAARLV 174

Query: 117 EVKTVITGTKF---------------RF---GKDRAGDRGILQKRGEKYGFHTVFIDELR 158
             K    G  +                F   G++  G   +L+          +FI    
Sbjct: 175 NPKY--YGGDYNRMLEILLECKNTGTTFLVGGRNIEGVFKVLEDLDIPVELREMFISIPE 232

Query: 159 NNKSQIVSSSNIRT 172
                 +SS++IR 
Sbjct: 233 EKFRMDISSTDIRK 246


>gi|85058465|ref|YP_454167.1| pantoate--beta-alanine ligase [Sodalis glossinidius str.
           'morsitans']
 gi|123520056|sp|Q2NVR3|PANC_SODGM RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|84778985|dbj|BAE73762.1| pantothenate synthase [Sodalis glossinidius str. 'morsitans']
          Length = 284

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 60/224 (26%), Gaps = 37/224 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  +++     A+   ++V     +P    +               + L
Sbjct: 29  TMGN---LHEGHMALIDAGRARADKVVVSVFV---NPMQFDRPEDLAAYPRTLQEDCEQL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F   T     +    +  V+      ++ G                  
Sbjct: 83  TRRGVDMV----FAPATGVIYPDDLASQTFVDVPRFANILEGESRPGHFRGVATIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEK--YGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+        +++      Y    + +  +R      +SS N    L+  
Sbjct: 139 NLVQPDVACFGEKDFQQLAFIRQLVRDMSYDIEIIGVPTVRAADGLALSSRN--GYLSAE 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
               A  L      + + +  GE+    L        L   +  
Sbjct: 197 ERRLAPQLNQVLMRLVAQLREGERHIDGLLTSATEQLLQAGLRP 240


>gi|53712295|ref|YP_098287.1| pantoate--beta-alanine ligase [Bacteroides fragilis YCH46]
 gi|81608646|sp|Q64XM3|PANC_BACFR RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|52215160|dbj|BAD47753.1| pantoate-beta-alanine ligase [Bacteroides fragilis YCH46]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 37/206 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+  + LK      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELSVLKAQGKKVGLVPTMG---ALHAGHASLVKRSVNENE---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETA------ 100
              +P      +  +          K+LE  G           +     T + +      
Sbjct: 55  VFVNPTQFNDKNDLVKYPRTLDADCKLLEACGATYAFAPSVEEMYPEPDTRQFSYAPLDT 114

Query: 101 ----NYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
                +    F  + +++ +  E    +   +  FG+       I+++   +  F    +
Sbjct: 115 VMEGAFRPGHFNGVCQIVSKLFEA---VKPHRAYFGEKDFQQLAIIREMVRQMQFDLEIV 171

Query: 155 --DELRNNKSQIVSSSNIRTALTKGH 178
               +R      +SS N R +  +  
Sbjct: 172 GCPIVREEDGLALSSRNARLSAEERE 197


>gi|260753432|ref|YP_003226325.1| pantoate--beta-alanine ligase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552795|gb|ACV75741.1| pantoate/beta-alanine ligase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 287

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 1   MHVFHNI-EINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I E+   L  H +     G V  +G    +H GH  + ++A K ++   + VLS
Sbjct: 1   MLVIHTIAELRAHLDEHRQNRRKIGLVPTMGF---LHQGHMALAQKARKESD---VVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               + ++ G   +    F    A    E  +  V V+
Sbjct: 55  IFVNPIQFGVNEDLDVYPRDLPHDIALCKENGVDII----FAPSVAEIYPEPIMTSVEVQ 110

Query: 115 WLEVKTVITG 124
            L    ++ G
Sbjct: 111 SL--SNILIG 118


>gi|325181909|emb|CCA16363.1| ChromodomainhelicaseDNAbinding protein 8 putative [Albugo laibachii
            Nc14]
          Length = 2334

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 26/164 (15%)

Query: 88   SALIRYKFTLETANYSAEQFIQKVLV----EWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
              +I  +F  E    S E  ++ ++      ++ V  +       FG         +++ 
Sbjct: 1003 DRIIAVRFVKE-QTDSPEAVMEFLIKWKDTSYMHVDWLRVADIEAFGHHA---IMRMRRH 1058

Query: 144  GEKYGFHTVFI--DELRNNKSQIV----SSSNIRTALTKGHVLNAAHLLGYRFTIESDVI 197
              K+G        + +   K  I+    S + I   L    V  AA +  +R        
Sbjct: 1059 LRKHGRDVEVARENPVVAGKDDIIHFSESYTEIDRILDAKEVEEAAEMSPFRLY------ 1112

Query: 198  HGEKIGRTLGFPTANMQLSPDILL-----KEGV-YAIRFRTQDQ 235
            H       L  P  N  +   + L     K GV Y +++R    
Sbjct: 1113 HLTMEAHRLNDPELNAGIDGALQLSTVKMKRGVKYLVKWRDLSY 1156


>gi|168177770|ref|ZP_02612434.1| pantoate--beta-alanine ligase [Clostridium botulinum NCTC 2916]
 gi|182670692|gb|EDT82666.1| pantoate--beta-alanine ligase [Clostridium botulinum NCTC 2916]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ + I+  + +    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    + V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLI----FNPETSEMYPNKIYSHINVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|332531152|ref|ZP_08407065.1| bifunctional ADP-heptose synthase [Hylemonella gracilis ATCC 19624]
 gi|332039259|gb|EGI75672.1| bifunctional ADP-heptose synthase [Hylemonella gracilis ATCC 19624]
          Length = 167

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H+GH + L QA  +  +  + + + +   R +     P   L+P   
Sbjct: 33  RPLVFTNGVFDLMHVGHAIYLGQARALGASLLVALNT-DASARRL--GKGPERPLNPEHD 89

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           +  ++  +G   ++ + F  +    + +  I +V  + L     + G  +   
Sbjct: 90  RAALIAALGAVDVVTW-FDED----TPQSLIGEVRPDIL-----VKGGDYDMS 132


>gi|261837463|gb|ACX97229.1| pantoate-beta-alanine ligase [Helicobacter pylori 51]
          Length = 276

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M V   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRVLETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + E +G +A+    F  + +     +  Q++ +
Sbjct: 55  NPTQFGPNEDFSAYPRPLEKDLALCEGLGVNAV----FLPKISEMYPYEIEQRLKL 106


>gi|254853027|ref|ZP_05242375.1| tagD [Listeria monocytogenes FSL R2-503]
 gi|258606375|gb|EEW18983.1| tagD [Listeria monocytogenes FSL R2-503]
          Length = 130

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-IVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E   ++    +E   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PENNWEQKRDDIEKYGIDVFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L++         V++      +++ +S+S I+  L
Sbjct: 100 DFLKEVC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|241762361|ref|ZP_04760441.1| pantoate/beta-alanine ligase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373155|gb|EER62794.1| pantoate/beta-alanine ligase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 287

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 18/130 (13%)

Query: 1   MHVFHNI-EINQSLPNHLKGG-----VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I E+   L  H +       V  +G    +H GH  + ++A K ++   + VLS
Sbjct: 1   MLVIHTIAELRAHLDEHRQNRRKISLVPTMGF---LHQGHMALAQKARKESD---VVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               + ++ G   L    F    A    E  +  V V+
Sbjct: 55  IFVNPIQFGVNEDLDVYPRDLPHDIALCKENGVDIL----FAPSVAEIYPEPIMTSVEVQ 110

Query: 115 WLEVKTVITG 124
            L    ++ G
Sbjct: 111 SL--SNILIG 118


>gi|150006856|ref|YP_001301599.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides
           distasonis ATCC 8503]
 gi|255016113|ref|ZP_05288239.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 2_1_7]
 gi|256842533|ref|ZP_05548035.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides sp. D13]
 gi|262384396|ref|ZP_06077531.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 2_1_33B]
 gi|298377281|ref|ZP_06987234.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 3_1_19]
 gi|301308678|ref|ZP_07214630.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 20_3]
 gi|149935280|gb|ABR41977.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides
           distasonis ATCC 8503]
 gi|256735889|gb|EEU49221.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides sp. D13]
 gi|262294099|gb|EEY82032.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 2_1_33B]
 gi|298265695|gb|EFI07355.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 3_1_19]
 gi|300833202|gb|EFK63820.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 20_3]
          Length = 155

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 35/164 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD  H  H  ++  A  +A+   + V +        + SS     + P   + +
Sbjct: 8   VYTSGTFDMFHYNHLRMINYARSLADILIVGVSTDE------LVSSYKAKPIIPFHERLQ 61

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+E +    ++             +  +     V+ L +   + G  + FGK        
Sbjct: 62  IIEALKTPDIVI-----------PQHSLDHTEIVKKLNIDAFVVGDDW-FGK-----YDY 104

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           L+  G         +          VSSSN++  +       A 
Sbjct: 105 LKDLG---------VQVFYFPYGTGVSSSNLKKTI--HDSYEAN 137


>gi|60680473|ref|YP_210617.1| pantoate--beta-alanine ligase [Bacteroides fragilis NCTC 9343]
 gi|253563666|ref|ZP_04841123.1| pantothenate synthetase [Bacteroides sp. 3_2_5]
 gi|81316457|sp|Q5LGS1|PANC_BACFN RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|60491907|emb|CAH06666.1| putative pantoate--beta-alanine ligase [Bacteroides fragilis NCTC
           9343]
 gi|251947442|gb|EES87724.1| pantothenate synthetase [Bacteroides sp. 3_2_5]
 gi|301162007|emb|CBW21551.1| putative pantoate--beta-alanine ligase [Bacteroides fragilis 638R]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 37/206 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+  + LK      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELSVLKAQGKKVGLVPTMG---ALHAGHASLVKRSVNENE---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETA------ 100
              +P      +  +          K+LE  G           +     T + +      
Sbjct: 55  VFVNPTQFNDKNDLVKYPRTLDADCKLLEACGATYAFAPSVEEMYPEPDTRQFSYAPLDT 114

Query: 101 ----NYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
                +    F  + +++ +  E    +   +  FG+       I+++   +  F    +
Sbjct: 115 VMEGAFRPGHFNGVCQIVSKLFEA---VKPHRAYFGEKDFQQLAIIREMVRQMQFDLEIV 171

Query: 155 --DELRNNKSQIVSSSNIRTALTKGH 178
               +R      +SS N R +  +  
Sbjct: 172 GCPIVREEDGLALSSRNARLSAEERE 197


>gi|302914261|ref|XP_003051102.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732040|gb|EEU45389.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 456

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 38/194 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNP--HPRTIIQSSSPIFTLSPPSI 77
           V A G FD +HLGH   LEQA K   N+ + V ++ +   H R          T+   + 
Sbjct: 158 VYADGVFDLLHLGHMRQLEQAKKAFPNTTLVVGVTGDHETHKR-------KGLTVMSAAE 210

Query: 78  QEKILEKMG-FSALIR-YKF--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           + + L        +I    +  T E        ++                    +G D 
Sbjct: 211 RSETLRHCKWVDEVIEDCPWIVTPEFLEEHKLDYVAH--------------DDLPYGADE 256

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHVLNAAHLLGYRFTI 192
             D     K   K+         L   +++ VS++  I   +       A          
Sbjct: 257 GDDIYQPIKAAGKF---------LVTQRTEGVSTTGLITRIVRDYEKYIARQFKRGTSRQ 307

Query: 193 ESDVIHGEKIGRTL 206
           E +V   +K    L
Sbjct: 308 ELNVSWLKKNEMDL 321


>gi|240949932|ref|ZP_04754251.1| citrate lyase ligase [Actinobacillus minor NM305]
 gi|240295602|gb|EER46320.1| citrate lyase ligase [Actinobacillus minor NM305]
          Length = 350

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 62/178 (34%), Gaps = 38/178 (21%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA-- 89
           LGH  ++E+A    +   + ++S                +L P  +++K++ + G +   
Sbjct: 161 LGHQYLVEKAAAENDIVHLFIVS-------------EDKSLVPFQVRKKLV-QAGVAHLP 206

Query: 90  -LIRYK----------FTLET-----ANYSAEQFIQK----VLVEWLEVKTVITGTKFRF 129
            +  ++          F         A   +   +       + + L ++    G    F
Sbjct: 207 NVYCHESGSYIISSATFPSYFQENDNAVIESNAMLDLQIFGHIAKALGIQRRYVG-DEPF 265

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
            +       I+Q +    G   + +   + N  QI+S+S +R A+ +        +L 
Sbjct: 266 SRVTHLYNQIMQTQLPMQGIECIVVPR-KANSQQIISASAVRQAIKENDFERVKAMLP 322


>gi|226947660|ref|YP_002802751.1| pantoate--beta-alanine ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254778220|sp|C1FS96|PANC_CLOBJ RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226844567|gb|ACO87233.1| pantoate--beta-alanine ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ + I+  + +    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    + V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLI----FNPETSEMYPNKIYSHINVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|182678017|ref|YP_001832163.1| rfaE bifunctional protein [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633900|gb|ACB94674.1| rfaE bifunctional protein [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 501

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 16/116 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L+ A    +   I  ++ +   R +   + P+   +    +  +L  
Sbjct: 361 GCFDILHAGHVSLLDFARAHCDRL-IIAINSDESVRRLKGPTRPV---NSEQDRAFVLAA 416

Query: 85  M-GFSALIRYKFTLETANYSAEQFIQKVLVEWL--EVKTVI---TGTKFRFGKDRA 134
           +     ++   F  +    +  + I+ +  + L       +    G  F   +   
Sbjct: 417 LASVDVVVI--FNED----TPREIIEYLAPDVLIKGADYEVSQIVGADFVLSRGGE 466


>gi|254993723|ref|ZP_05275913.1| hypothetical protein LmonocytoFSL_12613 [Listeria monocytogenes FSL
           J2-064]
 gi|300764244|ref|ZP_07074238.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           FSL N1-017]
 gi|300514896|gb|EFK41949.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           FSL N1-017]
          Length = 127

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-IVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E   ++    +E   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PENNWEQKRDDIEKYGIDVFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L++         V++      +++ +S+S I+  L
Sbjct: 100 DFLKEVC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|319901321|ref|YP_004161049.1| pantothenate synthetase [Bacteroides helcogenes P 36-108]
 gi|319416352|gb|ADV43463.1| pantothenate synthetase [Bacteroides helcogenes P 36-108]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 66/204 (32%), Gaps = 33/204 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + LK      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIIHTIKDLQAELSALKVQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +     P    ++L+  G           +     T + + Y+   
Sbjct: 58  ---NPTQFNDKNDLVKYPRTPEADYRLLKDCGARFVFAPAVEEMYPQPDTRQFS-YAPLD 113

Query: 107 FIQKVLVEWLEVKTV---------ITGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
            + +          V         +       FG+       I+++   +       +  
Sbjct: 114 TVMEGAYRPGHFNGVCQIVSKLFDVVKPDRAYFGEKDFQQLAIIREMVRQMKLPLEIVGC 173

Query: 155 DELRNNKSQIVSSSNIRTALTKGH 178
             +R      +SS N R +  +  
Sbjct: 174 PIVREEDGLALSSRNARLSADERK 197


>gi|21224511|ref|NP_630290.1| bifunctional synthase/transferase [Streptomyces coelicolor A3(2)]
 gi|54036088|sp|Q9Z5B5|HLDE_STRCO RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|4455732|emb|CAB36595.1| putative bifunctional synthase/transferase [Streptomyces coelicolor
           A3(2)]
          Length = 463

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 12/97 (12%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH  +L+ A ++ +   + V        ++ +       ++P +
Sbjct: 326 HGTVVAAGGCFDLLHAGHVGLLQAARRLGDCLVVCV----NSDASVRRGKGGGRPVNPLA 381

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVL 112
            + ++L  +    A+    F  +    + E+ + ++ 
Sbjct: 382 DRVRVLRALACVDAVAV--FDED----TPERLLGELR 412


>gi|282851354|ref|ZP_06260719.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|282557322|gb|EFB62919.1| conserved domain protein [Lactobacillus gasseri 224-1]
          Length = 111

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  ++ N PI V+         +Q    +  +     + K     G   
Sbjct: 13  FHSGHEFLLNQARLVSENDPIIVM----MSGNYVQRGQMV--IMDKWQRAKAALNSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
           +    F    A   A+ F      ++  L V  +  G
Sbjct: 67  VFELPF--SFAVQPADIFANGSIRMLSNLGVSELFFG 101


>gi|294793735|ref|ZP_06758872.1| pantoate--beta-alanine ligase [Veillonella sp. 3_1_44]
 gi|294455305|gb|EFG23677.1| pantoate--beta-alanine ligase [Veillonella sp. 3_1_44]
          Length = 280

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 71/230 (30%), Gaps = 33/230 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M     IE  ++  N  +     IG      F  +H GH  +++QA K  NN  + V  F
Sbjct: 1   MEFITTIENVRNTVNSWRKEGYTIGFVPTMGF--LHEGHAALIDQARK--NNDKVIVSIF 56

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLET----------ANYSAE 105
              P    ++          +  +K+ E  G   LI      E           A+ S  
Sbjct: 57  VN-PIQFGENEDLSTYPRDINSDKKLCESHGVD-LIFAPNPEEMYQDKKAFVNIADLSDT 114

Query: 106 QFIQKVLVEWLEVKTVITGT-------KFRFGKDRAGDRGILQKRGEKYGFHT--VFIDE 156
               +  + +  V TV+             FG+  A    I++K      F    + +  
Sbjct: 115 LCGIRRPIHFKGVCTVVAKFFNITQPTNAYFGEKDAQQLAIIRKMVFDLNFPVNIIGVPI 174

Query: 157 LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +R       SS   R          AA +L     +    I      + +
Sbjct: 175 VREKDGLAKSS---RNTYLSSEERKAATILYKAIQLGKQTIQYGCSAKCI 221


>gi|265762486|ref|ZP_06091054.1| pantoate-beta-alanine ligase [Bacteroides sp. 2_1_16]
 gi|263255094|gb|EEZ26440.1| pantoate-beta-alanine ligase [Bacteroides sp. 2_1_16]
          Length = 282

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 37/206 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+  + LK      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELSVLKAQGKKVGLVPTMG---ALHAGHASLVKRSVNENE---VTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETA------ 100
              +P      +  +          K+LE  G           +     T + +      
Sbjct: 55  VFVNPTQFNDKNDLVKYPRTLDADCKLLEACGATYAFAPSVEEMYPEPDTRQFSYAPLDT 114

Query: 101 ----NYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI 154
                +    F  + +++ +  E    +   +  FG+       I+++   +  F    +
Sbjct: 115 VMEGAFRPGHFNGVCQIVSKLFEA---VKPHRAYFGEKDFQQLAIIREMVRQMQFDLEIV 171

Query: 155 --DELRNNKSQIVSSSNIRTALTKGH 178
               +R      +SS N R +  +  
Sbjct: 172 GCPIVREEDGLALSSRNARLSAEERE 197


>gi|37527823|ref|NP_931168.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|54036029|sp|Q7N0C3|HLDE_PHOLL RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|36787259|emb|CAE16340.1| ADP-heptose synthase [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 474

 Score = 38.6 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 41/184 (22%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M  F   +         +  V+  G FD +H GH   LE A ++ +   + V        
Sbjct: 323 MTEFQLKQAVVDARQRGERVVMTNGCFDILHAGHVSYLENARRLGDRLIVAV-------- 374

Query: 61  TIIQSSSPIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVL 112
               S +    L       +P   +  +L  +G    ++   F  +    + ++ I  VL
Sbjct: 375 ---NSDASTKRLKGESRPVNPLEQRMIVLSALGAVDWVV--PFEED----TPQRLIADVL 425

Query: 113 VEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            +      ++ G  ++  ++ AG   +        G     +     N    +S++NI  
Sbjct: 426 PD-----VLVKGGDYK-PEEIAGSEEVWAA-----GGDVKVL-----NFEDGISTTNIIK 469

Query: 173 ALTK 176
           A+  
Sbjct: 470 AIKN 473


>gi|323354330|gb|EGA86170.1| Met3p [Saccharomyces cerevisiae VL3]
          Length = 511

 Score = 38.6 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|255717478|ref|XP_002555020.1| KLTH0F19184p [Lachancea thermotolerans]
 gi|238936403|emb|CAR24583.1| KLTH0F19184p [Lachancea thermotolerans]
          Length = 323

 Score = 38.6 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 284 PEIKFKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
            E  FK +E+LK  + ED +  +K L    PL E +  
Sbjct: 58  EEQGFKSVEELKEKLKEDIETKKKELSKVDPLKELEEY 95


>gi|167534758|ref|XP_001749054.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772478|gb|EDQ86129.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score = 38.6 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V +IG FD  H GH  +L    +      + V     H            T+     + +
Sbjct: 172 VFSIGCFDLFHRGHENMLRMLREFGTFVVVGV-----HDDESYFKLKNKKTIHNTQQRVE 226

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW-LEVKTV--ITGTKFRFGKDRAGDR 137
            ++      +     T          +I+ ++ +  +E   V  + G        R    
Sbjct: 227 HVKNF-ADMVFVIPDTN------PTPWIRAMVSKQDVEAGRVCYVRGEDMIDFPGR---- 275

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAH 184
                      F    +      +S+ VSS+ +RT         A  
Sbjct: 276 ----------DFVEANMPVFFLPRSEGVSSTLLRTIYHDQDASKAEK 312


>gi|323466116|gb|ADX69803.1| Nucleotidyltransferase [Lactobacillus helveticus H10]
          Length = 383

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  IA N PI V+         +Q       +     + K+  + G
Sbjct: 10  FNPFHSGHEFLLNQARLIAGNDPIVVV----MSGNYVQRGE--MAIMSKCQRAKVALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  +   I+++    L V  ++ G
Sbjct: 64  ADLVFETPFSTAVEPADLFSLGNIEQLA--KLGVTDLVFG 101


>gi|319940858|ref|ZP_08015197.1| RfaE protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805740|gb|EFW02521.1| RfaE protein [Sutterella wadsworthensis 3_1_45B]
          Length = 164

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
              V   G FD +H GH   L QA  +  +  + V   N      +        ++  + 
Sbjct: 29  HPTVFTNGVFDILHRGHVTYLAQARALGASLIVAV---NSDASVKLLGKGDDRPINTQAD 85

Query: 78  QEKILEKMG-FSALIRYK 94
           +  +L  +     ++ + 
Sbjct: 86  RAAVLAALESVDLVVVFP 103


>gi|294791874|ref|ZP_06757022.1| pantoate--beta-alanine ligase [Veillonella sp. 6_1_27]
 gi|294457104|gb|EFG25466.1| pantoate--beta-alanine ligase [Veillonella sp. 6_1_27]
          Length = 280

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 30/191 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M     IE  ++  N  +     IG      F  +H GH  +++QA K  NN  + V  F
Sbjct: 1   MEFITTIENVRNTVNSWRKEGYTIGFVPTMGF--LHEGHAALIDQARK--NNDKVIVSIF 56

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLET----------ANYSAE 105
              P    ++          +  +K+ E  G   LI      E           A+ S  
Sbjct: 57  VN-PIQFGENEDLSTYPRDINSDKKLCESHGVD-LIFAPNPEEMYQDKKAFVNIADLSDT 114

Query: 106 QFIQKVLVEWLEVKTVITGT-------KFRFGKDRAGDRGILQKRGEKYGFHT--VFIDE 156
               +  + +  V TV+             FG+  A    I++K      F    + +  
Sbjct: 115 LCGIRRPIHFKGVCTVVAKFFNIIQPTNAYFGEKDAQQLAIIRKMVFDLNFPVNIIGVPI 174

Query: 157 LRNNKSQIVSS 167
           +R       SS
Sbjct: 175 VREEDGLAKSS 185


>gi|239056198|emb|CAQ58636.1| Ethanolamine-phosphate cytidylyltransferase [Vitis vinifera]
          Length = 424

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 21/146 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P    +P + +  ++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEITANKGPPV--TPLNERMIMVS- 114

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +         A    E F++K+  +   +  +I G       D      + +K G
Sbjct: 115 -GVKWVDEVIPDAPYAIT--EDFMKKLF-DEYNIDYIIHGDDPCILPDGTDAYALAKKAG 170

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNI 170
                           +++ VSS++I
Sbjct: 171 RYKQIK----------RTEGVSSTDI 186


>gi|192288694|ref|YP_001989299.1| RiBisCO-like protein [Rhodopseudomonas palustris TIE-1]
 gi|192282443|gb|ACE98823.1| RiBisCO-like protein [Rhodopseudomonas palustris TIE-1]
          Length = 432

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 48/180 (26%), Gaps = 28/180 (15%)

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             +     I   F  E A     +    +  E    +    G    F    A     L  
Sbjct: 14  ADLDLDNYIELDFDFECAG-DPREAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSA 72

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL--LGYRFTIESDVIHGE 200
                GF       +             R  +    V  A      G +       + GE
Sbjct: 73  EPRPSGFSV----PVECAA---------RGEVHACRVTIAHPHGNFGAKIPNLLSAVCGE 119

Query: 201 KIGRTLGFPTANMQ----LSPDIL----LKEGVYAIRFRTQ--DQTSYSGVA--NFGRNP 248
            +  + G P   +Q      P +      + G+  +R R Q  D+  + GV   N G  P
Sbjct: 120 GVFFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPP 179


>gi|6322469|ref|NP_012543.1| Met3p [Saccharomyces cerevisiae S288c]
 gi|88984437|sp|P08536|MET3_YEAST RecName: Full=Sulfate adenylyltransferase; AltName:
           Full=ATP-sulfurylase; AltName: Full=Methionine-requiring
           protein 3; AltName: Full=Sulfate adenylate transferase;
           Short=SAT
 gi|854583|emb|CAA60932.1| ATP sulphurylase [Saccharomyces cerevisiae]
 gi|1015638|emb|CAA89532.1| MET3 [Saccharomyces cerevisiae]
 gi|151945086|gb|EDN63337.1| ATP sulfurylase [Saccharomyces cerevisiae YJM789]
 gi|190409497|gb|EDV12762.1| ATP sulfurylase [Saccharomyces cerevisiae RM11-1a]
 gi|256269532|gb|EEU04817.1| Met3p [Saccharomyces cerevisiae JAY291]
 gi|285812903|tpg|DAA08801.1| TPA: Met3p [Saccharomyces cerevisiae S288c]
 gi|323332841|gb|EGA74244.1| Met3p [Saccharomyces cerevisiae AWRI796]
          Length = 511

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|17942558|pdb|1JEE|A Chain A, Crystal Structure Of Atp Sulfurylase In Complex With
           Chlorate
 gi|17942559|pdb|1JEE|B Chain B, Crystal Structure Of Atp Sulfurylase In Complex With
           Chlorate
 gi|17942560|pdb|1JED|A Chain A, Crystal Structure Of Atp Sulfurylase In Complex With Adp
 gi|17942561|pdb|1JED|B Chain B, Crystal Structure Of Atp Sulfurylase In Complex With Adp
 gi|17942562|pdb|1JEC|A Chain A, Crystal Structure Of Atp Sulfurylase In Complex With
           Thiosulfate
          Length = 510

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 199 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 252

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 253 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 311

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 312 LVESYKHELDIEVV 325


>gi|323308442|gb|EGA61687.1| Met3p [Saccharomyces cerevisiae FostersO]
          Length = 511

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|308183446|ref|YP_003927573.1| hypothetical protein HPPC_06575 [Helicobacter pylori PeCan4]
 gi|308065631|gb|ADO07523.1| hypothetical protein HPPC_06575 [Helicobacter pylori PeCan4]
          Length = 171

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFAQLIVL-----P-AYQNPFKKPCFLDAKTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 69  LK--GMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNAKE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGINAPISSSAIRASL 169


>gi|193213753|ref|YP_001994952.1| pantoate/beta-alanine ligase [Chloroherpeton thalassium ATCC 35110]
 gi|238692683|sp|B3QSB4|PANC_CHLT3 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|193087230|gb|ACF12505.1| pantoate/beta-alanine ligase [Chloroherpeton thalassium ATCC 35110]
          Length = 284

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 74/235 (31%), Gaps = 41/235 (17%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   +   Q     L+      G V  +G    +H GH  +++ A+K A+   + +++
Sbjct: 1   MKIIETVSEMQHFSESLRIAEKRLGVVPTMG---ALHDGHLSLVKLALKHAD---VAIMT 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     S               + EK G S +    F           F   V V+
Sbjct: 55  IFVNPLQFGPSEDFAKYPRTFERDAMLAEKAGVSCI----FAPTPETLYPSGFQTHVTVD 110

Query: 115 WL-----------EVKTV--ITGTKFR--------FGKDRAGDRGILQKRGEKYGFHTVF 153
            +             + V  +    F         FG+  A     ++K  +   F    
Sbjct: 111 EITQGFEGELRPGHFRGVTTVVAKLFNITKPHVAVFGEKDAQQLAAIRKMQKDLNFDVEI 170

Query: 154 IDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           +    +R       SS NI   L       A  L       +S + HGE+  +TL
Sbjct: 171 VPAPIVRETDGLAKSSRNI--YLNPAERKQAVVLNESLEIAKSAIQHGERNVKTL 223


>gi|77456712|ref|YP_346217.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas fluorescens Pf0-1]
 gi|119365074|sp|Q3KJ28|HLDE_PSEPF RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|77380715|gb|ABA72228.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Pseudomonas
           fluorescens Pf0-1]
          Length = 474

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 27/169 (15%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   I  ++ +     +     P  
Sbjct: 332 ADARAHNEKIVFTNGCFDILHAGHVTYLEQARAQGDRL-IVAINDDASVSRLKGPGRP-- 388

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I        A  + E  +++V     +   ++ G  +  
Sbjct: 389 -INSVDRRMAVLAGLGAVDWVI------SFAEGTPENLLREV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           G D+     I     + YG     +  + N+     S++ I   + K  
Sbjct: 435 GIDQVVGADI----VKAYGGAVKVLGLVENS-----STTAIVEKIRKSE 474


>gi|39654828|pdb|1R6X|A Chain A, The Crystal Structure Of A Truncated Form Of Yeast Atp
           Sulfurylase, Lacking The C-Terminal Aps Kinase-Like
           Domain, In Complex With Sulfate
          Length = 395

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 199 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 252

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 253 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 311

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 312 LVESYKHELDIEVV 325


>gi|16800145|ref|NP_470413.1| hypothetical protein lin1076 [Listeria innocua Clip11262]
 gi|46907316|ref|YP_013705.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091887|ref|ZP_00229681.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           str. 4b H7858]
 gi|217964822|ref|YP_002350500.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           HCC23]
 gi|226223702|ref|YP_002757809.1| glycerol-3-phosphate cytidylyltransferase (gct) [Listeria
           monocytogenes Clip81459]
 gi|254933194|ref|ZP_05266553.1| tagD [Listeria monocytogenes HPB2262]
 gi|290894349|ref|ZP_06557314.1| tagD protein [Listeria monocytogenes FSL J2-071]
 gi|16413535|emb|CAC96307.1| tagD [Listeria innocua Clip11262]
 gi|46880583|gb|AAT03882.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47019603|gb|EAL10342.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           str. 4b H7858]
 gi|217334092|gb|ACK39886.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           HCC23]
 gi|225876164|emb|CAS04870.1| Putative glycerol-3-phosphate cytidylyltransferase (gct) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|290556104|gb|EFD89653.1| tagD protein [Listeria monocytogenes FSL J2-071]
 gi|293584753|gb|EFF96785.1| tagD [Listeria monocytogenes HPB2262]
 gi|307570618|emb|CAR83797.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           L99]
 gi|313619466|gb|EFR91164.1| glycerol-3-phosphate cytidylyltransferase [Listeria innocua FSL
           S4-378]
 gi|313624210|gb|EFR94271.1| glycerol-3-phosphate cytidylyltransferase [Listeria innocua FSL
           J1-023]
 gi|328466749|gb|EGF37870.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           1816]
 gi|328475273|gb|EGF46051.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           220]
 gi|332311493|gb|EGJ24588.1| Glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           str. Scott A]
          Length = 127

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +LE+A  + +   + + +                       ++ 
Sbjct: 4   VITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDE------FNRIKHKEAYHNFEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  +       G+  
Sbjct: 58  ILEAIRYVDEVI-----------PESNWEQKLEDVKNRDIDIFVMGDDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S+S I+  L
Sbjct: 101 FLKPYC-----EVVYLP-----RTDGISTSKIKDDL 126


>gi|33357107|pdb|1J70|A Chain A, Crystal Structure Of Yeast Atp Sulfurylase
 gi|33357108|pdb|1J70|B Chain B, Crystal Structure Of Yeast Atp Sulfurylase
 gi|33357109|pdb|1J70|C Chain C, Crystal Structure Of Yeast Atp Sulfurylase
          Length = 514

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 203 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 256

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 257 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 315

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 316 LVESYKHELDIEVV 329


>gi|46117458|ref|XP_384747.1| hypothetical protein FG04571.1 [Gibberella zeae PH-1]
          Length = 423

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 18/142 (12%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +  P  L+G +   G FD  H GH   + QA ++ N     V     H    I ++    
Sbjct: 23  EPAPELLEGRIWVDGCFDFFHHGHAGAIVQARQLGNELYAGV-----HSDEAILANKGP- 76

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           T+   + +    +       +    T   AN     ++  +       K V+ G      
Sbjct: 77  TVMTLAERVAATDAC---RWV----TRSVANAPYVTYLPYIT--HYGCKYVVHGDDIT-- 125

Query: 131 KDRAGDRGILQKRGEKYGFHTV 152
            D  G+    +   E   F  V
Sbjct: 126 SDSDGN-DCYRFVKEAGRFKVV 146


>gi|301059543|ref|ZP_07200455.1| bifunctional protein RfaE, domain II [delta proteobacterium NaphS2]
 gi|300446308|gb|EFK10161.1| bifunctional protein RfaE, domain II [delta proteobacterium NaphS2]
          Length = 162

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E    L    K  V   G FD +H GH   L  A  + ++  I  L+ +   R I  S  
Sbjct: 16  EDCDVLKRSGKRIVFTNGCFDILHPGHARYLHAARDLGDHL-IVALNSDRSVRAIKGSKR 74

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           PIF   P  ++ ++L  +     +   F  +             ++++L    ++ G  +
Sbjct: 75  PIF---PEKMRAELLAALECVNCVVI-FDEDN---------PLRVIQYLLPHVLVKGGDW 121

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           +  +DR     +++      G     I  ++ + +  +    IR  
Sbjct: 122 Q--EDRIIGADVVKAA----GGEVRRIPFVKGHSTTDIIERIIRRY 161


>gi|260103142|ref|ZP_05753379.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260083052|gb|EEW67172.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|328464791|gb|EGF36106.1| hypothetical protein AAULH_09193 [Lactobacillus helveticus MTCC
           5463]
          Length = 383

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  IA N PI V+         +Q       +     + K+  + G
Sbjct: 10  FNPFHSGHEFLLNQARLIAGNDPIVVV----MSGNYVQRGE--MAIMSKCQRAKVALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  +   I+++    L V  ++ G
Sbjct: 64  ADLVFETPFSTAVEPADLFSLGNIEQLA--KLGVTDLVFG 101


>gi|283856595|ref|YP_163689.2| pantoate/beta-alanine ligase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|158706109|sp|Q5NL15|PANC_ZYMMO RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|283775606|gb|AAV90578.2| pantoate/beta-alanine ligase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 287

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 1   MHVFHNI-EINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I E+   L  H +     G V  +G    +H GH  + ++A + ++   + VLS
Sbjct: 1   MLVIHTIAELRAHLDEHRQNRRKIGLVPTMGF---LHQGHMALAQKAREESD---VVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               + ++ G   +    F    A    E  +  V V+
Sbjct: 55  IFVNPIQFGVNEDLDVYPRDLPHDIALCKENGVDII----FAPSVAEIYPEPIMTSVEVQ 110

Query: 115 WLEVKTVITG 124
            L    ++ G
Sbjct: 111 SL--SNILIG 118


>gi|23957816|gb|AAN40829.1| PanC [Synechococcus elongatus PCC 7942]
          Length = 378

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 31/192 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M    + E  ++    ++G V     +G    +H GH  ++E++ +  +   + ++S   
Sbjct: 1   MRQLISPEALRAFRQSVQGSVGFVPTMG---ALHAGHRSLIERSRQQDD---VVIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRY--------KFTLETANYSAEQFIQ 109
           +PR                    + E  G  A+                T      + IQ
Sbjct: 55  NPRQFGPQEDLSRYPQTLDADLALCEAAGVDAVFCPTAEALYPRPSDRSTGVQPPAELIQ 114

Query: 110 KVLVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFID 155
            +                L++  ++   +  FG+  A    ++Q+  E +      V   
Sbjct: 115 SLCGRQRPGHFQGVATVVLKLLQLVQPQRAYFGEKDAQQLRVIQRLVEDFNLPIAIVPCP 174

Query: 156 ELRNNKSQIVSS 167
            +R      +SS
Sbjct: 175 TVREPDGLALSS 186


>gi|11499013|ref|NP_070247.1| glycerol-3-phosphate cytidyltransferase (taqD) [Archaeoglobus
           fulgidus DSM 4304]
 gi|74549265|sp|O28854|RIBL_ARCFU RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|2649161|gb|AAB89835.1| glycerol-3-phosphate cytidyltransferase (taqD) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 137

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 25/157 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +A G FD IH GH   L +A K+ +   + V                   + P   + ++
Sbjct: 1   MATGTFDIIHPGHITFLREAKKLGDELIVIV-------AREKNVRHKPKPVVPEEQRRRV 53

Query: 82  LEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +E +      I                     +  L+   ++ G    F      D   L
Sbjct: 54  VEAIKYVDKAILGDEDDMFR-----------PIMELKPDVIVLGHDQHF------DEDWL 96

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++   K   +   +         + SS  I   + + 
Sbjct: 97  KEELRKRNLNCEVVRIRVKEDCPLCSSHKIIERILEK 133


>gi|56750408|ref|YP_171109.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus
           elongatus PCC 6301]
 gi|81299960|ref|YP_400168.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus
           elongatus PCC 7942]
 gi|81596680|sp|Q5N530|PANCY_SYNP6 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|108860878|sp|Q31P38|PANCY_SYNE7 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|56685367|dbj|BAD78589.1| pantothenate synthetase/cytidylate kinase [Synechococcus elongatus
           PCC 6301]
 gi|81168841|gb|ABB57181.1| pantothenate synthetase / cytidylate kinase [Synechococcus
           elongatus PCC 7942]
          Length = 527

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 31/192 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M    + E  ++    ++G V     +G    +H GH  ++E++ +  +   + ++S   
Sbjct: 1   MRQLISPEALRAFRQSVQGSVGFVPTMG---ALHAGHRSLIERSRQQDD---VVIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRY--------KFTLETANYSAEQFIQ 109
           +PR                    + E  G  A+                T      + IQ
Sbjct: 55  NPRQFGPQEDLSRYPQTLDADLALCEAAGVDAVFCPTAEALYPRPSDRSTGVQPPAELIQ 114

Query: 110 KVLVEW------------LEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFID 155
            +                L++  ++   +  FG+  A    ++Q+  E +      V   
Sbjct: 115 SLCGRQRPGHFQGVATVVLKLLQLVQPQRAYFGEKDAQQLRVIQRLVEDFNLPIAIVPCP 174

Query: 156 ELRNNKSQIVSS 167
            +R      +SS
Sbjct: 175 TVREPDGLALSS 186


>gi|47569380|ref|ZP_00240063.1| glycerol-3-phosphate cytidylyltransferase [Bacillus cereus G9241]
 gi|47553968|gb|EAL12336.1| glycerol-3-phosphate cytidylyltransferase [Bacillus cereus G9241]
          Length = 131

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + ++  + V S          +            ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKSLGDHLTVAVSSDE------FNAMKNKTAYHSFEHRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE--VKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E    +   + +   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PECSWDQKKKDVVNKDIDVFVMGDDWN------GEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L+   +      V++      ++  +S++ I+  L
Sbjct: 100 DYLKDHCK-----VVYLP-----RTVGISTTKIKKEL 126


>gi|313232112|emb|CBY09223.1| unnamed protein product [Oikopleura dioica]
          Length = 83

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 182 AAHLLGYRFTIESDVIHGEKIGRT-LGFPTANMQLSPDIL------LKEGVYAIRFRTQD 234
           A  +    F +   V  G   G   LG PTAN   S +++      L+ G+Y    +  +
Sbjct: 3   AGKIPAVPFFLRGVVCKGFGRGSKELGCPTAN--FSDEVVGTLPEGLENGIYYGFAKVNN 60

Query: 235 QTSYSGVANFGRN 247
              +  VA+ G  
Sbjct: 61  DQVHKMVASIGWK 73


>gi|254566515|ref|XP_002490368.1| ATP sulfurylase, catalyzes the primary step of intracellular
           sulfate activation [Pichia pastoris GS115]
 gi|238030164|emb|CAY68087.1| ATP sulfurylase, catalyzes the primary step of intracellular
           sulfate activation [Pichia pastoris GS115]
 gi|328350762|emb|CCA37162.1| sulfate adenylyltransferase [Pichia pastoris CBS 7435]
          Length = 547

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 34/175 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +         N    ++    HP   +     I   +   + ++I++K   G 
Sbjct: 199 MHRAHREL--TVRAARANLANVLI----HPVVGLTKPGDIDHHTRVKVYQEIIKKYPNGM 252

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL------- 140
           + L      +  A    E     ++ +       I G         +             
Sbjct: 253 AQLSLLPLAMRMAG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSAGVDFYGPYDAQE 311

Query: 141 --QKRGEKYGFHTV---------------FIDELRNN-KSQIVSSSNIRTALTKG 177
             +K  ++     V                ID ++   ++  +S + +R  L  G
Sbjct: 312 LVEKYKDELDIQVVPFRMVTYLPDEDRYAPIDTVKEGTRTLNISGTELRKRLRDG 366


>gi|219564302|dbj|BAH03721.1| ATP sulfurylase [Saccharomyces pastorianus]
 gi|219564310|dbj|BAH03727.1| ATP sulfurylase [Saccharomyces pastorianus]
          Length = 511

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|299472504|emb|CBN77289.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 54

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 259 ESFIF-DFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIY 297
           E  +  +F Q+ YG++  V    ++R E+ F  +      
Sbjct: 2   EPHLLHEFDQDFYGEKLHVLLCGFIRKELNFNSLGATSKQ 41


>gi|224475782|ref|YP_002633388.1| teichoic acid biosynthesis protein D [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|222420389|emb|CAL27203.1| teichoic acid biosynthesis protein D [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 132

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 35/160 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A ++ +   I  LS +              +      ++ 
Sbjct: 4   VITYGTYDLLHYGHIELLRRAREMGDYL-IVALSSDE-----FNRIKNKKSYYNYEQRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL-VEWLEVKTVITGTKFRFGKDRAGDRG 138
           +LE +     +I             E + QK   VE  +V T + G  +       G+  
Sbjct: 58  MLESIRYVDLVI-----------PEENWGQKERDVERYDVDTFVMGHDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            L+ + E           +   +++ +S++ I+  L    
Sbjct: 101 FLKDKCEV----------IYLKRTEGISTTQIKKELYGKD 130


>gi|170757715|ref|YP_001780078.1| pantoate--beta-alanine ligase [Clostridium botulinum B1 str. Okra]
 gi|229485646|sp|B1IEL5|PANC_CLOBK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|169122927|gb|ACA46763.1| pantoate--beta-alanine ligase [Clostridium botulinum B1 str. Okra]
          Length = 281

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ + I+  + +    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    + V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLI----FNPETSEMYPNKIYSHINVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|145297595|ref|YP_001140436.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|150383465|sp|A4SIG6|HLDE_AERS4 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|142850367|gb|ABO88688.1| ADP-heptose synthase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 475

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A K+ +   + V + +   R +     P+   +    +  
Sbjct: 343 VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNT-DGSVRRLKGPGRPV---NSTDRRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +G    ++        A  + ++ I +VL + L     + G  ++
Sbjct: 399 VLAGLGAVDWVVP------FAEDTPQRLIAEVLPDLL-----VKGGDYK 436


>gi|116872482|ref|YP_849263.1| glycerol-3-phosphate cytidylyltransferase [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116741360|emb|CAK20484.1| glycerol-3-phosphate cytidylyltransferase [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 127

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 35/156 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +LE+A  + +   + + +                       ++ 
Sbjct: 4   VITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDE------FNRMKHKEAYHNFEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ILE +     +I               + QK+  V+  ++   + G  +       G+  
Sbjct: 58  ILEAIRYVDEVI-----------PESNWEQKLEDVKNRDIDIFVMGDDW------EGEFD 100

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            L+          V++      ++  +S+S I+  L
Sbjct: 101 FLKPYC-----EVVYLP-----RTDGISTSKIKDDL 126


>gi|322375838|ref|ZP_08050349.1| pantetheine-phosphate adenylyltransferase [Streptococcus sp. C300]
 gi|321279106|gb|EFX56148.1| pantetheine-phosphate adenylyltransferase [Streptococcus sp. C300]
          Length = 162

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+E+A K+ +   + V  +NPH +  +          P   +++ +EK
Sbjct: 10  GSFDPMTNGHLDIIERASKLFDKLYVGVF-YNPHKQGFL----------PVENRKRAVEK 58

Query: 85  --MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                  +            S +Q +  V  + L  KT++ G +                
Sbjct: 59  AVAHLDNVEVLA--------SHDQLVVDVA-KRLGAKTLVRGLRNTTDLQYESSFDY--- 106

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +       I      +   +SSS +R  L
Sbjct: 107 YNHQLAPEIETIYLYSRPEHLYISSSAVRELL 138


>gi|320355096|ref|YP_004196435.1| rfaE bifunctional protein [Desulfobulbus propionicus DSM 2032]
 gi|320123598|gb|ADW19144.1| rfaE bifunctional protein [Desulfobulbus propionicus DSM 2032]
          Length = 422

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           +  H        G FD +H GH   LE A + A+   + + + +   R +     P   +
Sbjct: 282 IRRHGSRIAFTNGCFDILHAGHVSYLEHARRTADCLVVGLNT-DSSVRMLKGPGRP---M 337

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           +  + + ++L  +G        F +  A  +    I  +L      + ++ G  +
Sbjct: 338 NHEADRARVLAALG-----CVDFVVLFAEETPIDLITAIL-----PEVLVKGADY 382


>gi|146320215|ref|YP_001199926.1| hypothetical protein SSU98_0368 [Streptococcus suis 98HAH33]
 gi|253751238|ref|YP_003024379.1| hypothetical protein SSUSC84_0331 [Streptococcus suis SC84]
 gi|253753139|ref|YP_003026279.1| hypothetical protein SSU0345 [Streptococcus suis P1/7]
 gi|253754962|ref|YP_003028102.1| hypothetical protein SSUBM407_0334 [Streptococcus suis BM407]
 gi|158514148|sp|A4VZI7|Y368_STRS2 RecName: Full=UPF0348 protein SSU98_0368
 gi|145691021|gb|ABP91526.1| Predicted nucleotidyltransferase [Streptococcus suis 98HAH33]
 gi|251815527|emb|CAZ51109.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251817426|emb|CAZ55166.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251819384|emb|CAR44808.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|292557805|gb|ADE30806.1| Predicted nucleotidyltransferase [Streptococcus suis GZ1]
 gi|319757515|gb|ADV69457.1| hypothetical protein SSUJS14_0354 [Streptococcus suis JS14]
          Length = 363

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +LEQA        I V+S        +Q   P   +     + ++  + G   
Sbjct: 13  FHTGHKYLLEQA----EGLKIVVMS-----GNFMQRGEPA--IVDKWTRAQMALEHGADL 61

Query: 90  LIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDR 137
           ++   F +     SA+ F +    ++  L V+ ++ GT+      +  D 
Sbjct: 62  VVEMPFLVSV--QSADHFAKGAISILHRLGVEKLVFGTEEMLDYQKIADI 109


>gi|14488754|pdb|1G8F|A Chain A, Atp Sulfurylase From S. Cerevisiae
 gi|14488755|pdb|1G8G|A Chain A, Atp Sulfurylase From S. Cerevisiae: The Binary Product
           Complex With Aps
 gi|14488756|pdb|1G8G|B Chain B, Atp Sulfurylase From S. Cerevisiae: The Binary Product
           Complex With Aps
 gi|14488757|pdb|1G8H|A Chain A, Atp Sulfurylase From S. Cerevisiae: The Ternary Product
           Complex With Aps And Ppi
 gi|14488758|pdb|1G8H|B Chain B, Atp Sulfurylase From S. Cerevisiae: The Ternary Product
           Complex With Aps And Ppi
          Length = 511

 Score = 38.2 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|296085807|emb|CBI31131.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 21/146 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P    +P + +  ++  
Sbjct: 3   GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEITANKGPPV--TPLNERMIMVS- 55

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +         A    E F++K+  +   +  +I G       D      + +K G
Sbjct: 56  -GVKWVDEVIPDAPYAIT--EDFMKKLF-DEYNIDYIIHGDDPCILPDGTDAYALAKKAG 111

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNI 170
                           +++ VSS++I
Sbjct: 112 RYKQIK----------RTEGVSSTDI 127


>gi|256810120|ref|YP_003127489.1| cytidyltransferase-related domain protein [Methanocaldococcus
           fervens AG86]
 gi|327488405|sp|C7P607|RIBL_METFA RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|256793320|gb|ACV23989.1| cytidyltransferase-related domain protein [Methanocaldococcus
           fervens AG86]
          Length = 150

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
           +K  VV  G FD +H GH+ +L+ A  + +   I +++ +      ++       + P  
Sbjct: 2   VKKRVVTAGTFDILHPGHYEVLKFAKSLGDEL-IVIVARD----ETVKKIKGRKPIIPEE 56

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +++E +                    +    +    L+   ++ G           D
Sbjct: 57  QRREMVEALK-------PVDKAILGSLKNKLEPILE---LKPDVIVLGPDQT-----TFD 101

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSS 168
              L++   KYG H   +   +  K     SS
Sbjct: 102 EETLKEELAKYGLHPEIV-RFKGYKKCPFHSS 132


>gi|241759930|ref|ZP_04758030.1| pantoate--beta-alanine ligase [Neisseria flavescens SK114]
 gi|241319938|gb|EER56334.1| pantoate--beta-alanine ligase [Neisseria flavescens SK114]
          Length = 278

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M + H I+  +              +GN   +H GH  ++ +A K A+N    V+S   +
Sbjct: 1   MQIIHTIKELREWRKTAGKVAFVPTMGN---LHEGHLALVREAKKRADN---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G + +           +  +F +E  +   E  
Sbjct: 55  RLQFGQGEDFDKYPRTLQQDADKLVGEGVAVVFAPDEKELYPNVEQRFNVEPPHLQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGF--HTVFIDELR 158
            +     +  V TV+             FGK       I++   E   F    V +D  R
Sbjct: 115 GKFRPGHFRGVATVVTKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +    +SS N    L++     A  L 
Sbjct: 175 ASDGLALSSRN--QYLSEAERAEAPRLY 200


>gi|114566304|ref|YP_753458.1| hypothetical protein Swol_0766 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122318614|sp|Q0AYW7|Y766_SYNWW RecName: Full=UPF0348 protein Swol_0766
 gi|114337239|gb|ABI68087.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 416

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +LE++ +  + S   V+         +Q   P F       + ++    G   
Sbjct: 13  FHNGHLYLLEKSRQQGDFSATVVV----MSGNFLQRGEPAF--CDKWARAEMALTAGVDL 66

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVIT 123
           LI   F    A  SA  +  K  V+ L+   V+T
Sbjct: 67  LIELPF--CFATRSA-YYFAKGAVQLLQRSGVVT 97


>gi|331671792|ref|ZP_08372588.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA280]
 gi|331070781|gb|EGI42140.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA280]
          Length = 134

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +             +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--HQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYGADILVMGDDW 96


>gi|323341323|ref|ZP_08081567.1| cytidylyltransferase domain protein [Lactobacillus ruminis ATCC
           25644]
 gi|323091200|gb|EFZ33828.1| cytidylyltransferase domain protein [Lactobacillus ruminis ATCC
           25644]
          Length = 440

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 36/154 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  IL++A  + +   + V S  F+            I        +
Sbjct: 4   VITYGTFDMLHQGHLNILKRAKALGDYLIVGVTSDDFD-------SRRGKINVQQSMMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +++ G    +I  ++          +  +   +    +     G+ +       G  
Sbjct: 57  VEGVKETGLADQIIIEEY----------EGQKIDDINRFGIDIFAIGSDW------QGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
             L +  +           +   +++ +SS+ IR
Sbjct: 101 DYLSEFCKV----------VYLERTKGISSTQIR 124


>gi|254585885|ref|XP_002498510.1| ZYRO0G11990p [Zygosaccharomyces rouxii]
 gi|238941404|emb|CAR29577.1| ZYRO0G11990p [Zygosaccharomyces rouxii]
          Length = 507

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 35/176 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPAGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG-------DRGI 139
           + +      +       E     ++ +       I G      G +  G       D   
Sbjct: 254 AYMSLLPLAMRMGG-DKEAVWHAIIRKNYGASHFIVGRDHAGPGSNSKGEDFYGPYDAQQ 312

Query: 140 L-QKRGEKYGFHTV---------------FIDELRNNKSQ--IVSSSNIRTALTKG 177
           L +    + G   V                IDE+   K++   +S + +R  L  G
Sbjct: 313 LVESYKNELGIEVVPFRMVTFLPDENRYAPIDEIDTTKTRTLNISGTELRRRLRDG 368


>gi|298373570|ref|ZP_06983559.1| pantoate--beta-alanine ligase [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274622|gb|EFI16174.1| pantoate--beta-alanine ligase [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 286

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 71/264 (26%), Gaps = 58/264 (21%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++E+A+   N   IT++S   +P                     +LEK G   
Sbjct: 33  LHRGHLSLVERAVAQNN---ITIVSVFVNPTQFNNPDDLRSYPRTLDADVALLEKAGCKY 89

Query: 90  LIRY-------------KFTLETANYSAEQFIQKVLVEWLEVKTVITG--------TKFR 128
           +                 F  +      +    +           I G         +  
Sbjct: 90  VFAPKVEDIYTSDELGSPFQFDFEGLD-KVMEGRFRPNHFNGVVQIVGKLFELASPDRAY 148

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FG+       I++   ++Y      +    +R +    +SS   R  L   +    A  +
Sbjct: 149 FGEKDFQQLAIIRLMTKRYHPSVEIVACPIVREDSGLAMSS---RNMLLSDNQRKVASHI 205

Query: 187 GYRFTIESDVIHGEKIGRTLGFPTANMQLSPDIL-----LKEG----------------- 224
                     +    +        A ++  P++      + +G                 
Sbjct: 206 YAVLAEGRQFVPNTPVAELKECTIAAIEQKPELKVEYFEIVDGNTLQNIEKWDDTSYVVG 265

Query: 225 ---VYAIRFRTQDQTSYSGVANFG 245
              VY  + R  D   Y    N G
Sbjct: 266 CITVYCGKVRLIDNICYK---NIG 286


>gi|297379229|gb|ADI34116.1| pantoate--beta-alanine ligase [Helicobacter pylori v225d]
          Length = 276

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRALETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + E +G SA+  
Sbjct: 55 NPTQFGANEDFNAYPRPLEKDLALCEGLGVSAVFV 89


>gi|227892819|ref|ZP_04010624.1| nucleotidyltransferase [Lactobacillus ultunensis DSM 16047]
 gi|227865460|gb|EEJ72881.1| nucleotidyltransferase [Lactobacillus ultunensis DSM 16047]
          Length = 384

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA  +A N PI V+         +Q       +     + K   + G
Sbjct: 10  FNPFHSGHEFLLNQARLVAKNDPIVVI----MSGNYVQRGE--MAIMSKWERAKAALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  +   ++++    L V  ++ G
Sbjct: 64  ADLVFESPFSTAVEPADLFSLGNLEQLA--KLGVTDLVFG 101


>gi|210135493|ref|YP_002301932.1| nicotinate-nucleotide adenyltransferase [Helicobacter pylori P12]
 gi|229485611|sp|B6JNH4|NADD_HELP2 RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|210133461|gb|ACJ08452.1| nicotinate-nucleotide adenyltransferase [Helicobacter pylori P12]
          Length = 174

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++   + + VL     P            L   +     E+ 
Sbjct: 18  GSFDPLHKAHLAIIDQTLELLPFAKLIVL-----P-AYQNPFKKPCFLDAKTRFKELERA 71

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   ++ G           +   
Sbjct: 72  LK--GMPRVLLSDFEIKQERAVPTIESVIFFQKLYRPKTLYLVIGADCLRHLSSWTNATE 129

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 172


>gi|153865084|ref|ZP_01997739.1| Pantoate-beta-alanine ligase [Beggiatoa sp. SS]
 gi|152145422|gb|EDN72262.1| Pantoate-beta-alanine ligase [Beggiatoa sp. SS]
          Length = 167

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN---FDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +  ++    +  + LK     IG      G+H GH L++++A +  +   IT++S   
Sbjct: 1   MKIIESVSKTSTYIDELKKNGQTIGFVPTLGGLHPGHQLLMQKAREEND---ITLISIFL 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKV 111
           +P    +    +   S     +++ ++     +        + F  +  ++   Q  +  
Sbjct: 58  NPMQ-FRKKKFLAYPSDFEQDKRVAKETQVDMIFHPTVKGMFPFVEDIDDFFKCQ--EDE 114

Query: 112 LVEWLEVKTVITGTK 126
           L++      VI    
Sbjct: 115 LIDRDRAHFVIETKD 129


>gi|269103513|ref|ZP_06156210.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163411|gb|EEZ41907.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 477

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 27/155 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K+ +   + V S +   + +     P+   +P   +  
Sbjct: 344 VMTNGCFDILHAGHVAYLNEAAKLGDRLIVAVNS-DASVQALKGPGRPV---NPEDRRMA 399

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ E    + ++ I +VL        ++ G  ++  ++ AG + +
Sbjct: 400 VLAGLGAVDWVV--PFSEE----TPQRLISEVL-----PTLLVKGGDYK-PEEIAGGKEV 447

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +       G     +     N     S++ I  A+
Sbjct: 448 IAA-----GGEVKVL-----NFEDGCSTTEIINAI 472


>gi|225868981|ref|YP_002744929.1| phosphopantetheine adenylyltransferase [Streptococcus equi subsp.
           zooepidemicus]
 gi|259491323|sp|C0MD70|COAD_STRS7 RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|225702257|emb|CAX00016.1| phosphopantetheine adenylyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 166

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 29/155 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++++A  +  +  + + + NP+ +                ++ ++L +
Sbjct: 10  GSFDPVTNGHMDMIKRASHLFEHVYVGIFN-NPNKQGFF----------TFELRAQMLRE 58

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
               A+            SAE  +   L   L V  +I G      F +          L
Sbjct: 59  ----AVCALP---NVTVVSAEHGLAVDLARELSVTHLIRGLRNTADFDYEAG-------L 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +    +       I  +  +  Q +SSS IR  + 
Sbjct: 105 EYFNHRLAPEIETIYLMATHDLQPISSSRIRELIA 139


>gi|325271279|ref|ZP_08137820.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas sp. TJI-51]
 gi|324103593|gb|EGC00899.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas sp. TJI-51]
          Length = 473

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I        +  + E  + +V     +   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVI------SFSEGTPENLLSQV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G D+     I     + YG     +  + N+     S++ I   + K 
Sbjct: 435 GIDQVVGADI----VKAYGGTVKVLGLVENS-----STTAIVEKIRKH 473


>gi|269793296|ref|YP_003318200.1| rfaE bifunctional protein [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100931|gb|ACZ19918.1| rfaE bifunctional protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 479

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 27/157 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   +  A  + +   I  L+ +   R +   + P+   +P  ++ +
Sbjct: 349 VFTNGCFDVLHAGHVRCIRSARAMGDRL-IVGLNSDQSVRRLKGPNRPV---NPEELRAE 404

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +     ++ +            Q     ++  +  + ++ G  +R   D  G R +
Sbjct: 405 VLCALEDVDGVVIFH-----------QDTPLEIIRAIRPQVLVKGGDYR-PCDIVGHREV 452

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L      +G     +  L     + +S++ I   +  
Sbjct: 453 L-----SWGGRVEVVPLL-----EGLSTTRIIERIRS 479


>gi|187777516|ref|ZP_02993989.1| hypothetical protein CLOSPO_01107 [Clostridium sporogenes ATCC
           15579]
 gi|187774444|gb|EDU38246.1| hypothetical protein CLOSPO_01107 [Clostridium sporogenes ATCC
           15579]
          Length = 281

 Score = 38.2 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ H I+  + +    K      G V  +G    +H GH  ++++A +  +     V+S
Sbjct: 1   MNIVHTIKDVKEIIKKWKDENLSIGYVPTMGY---LHEGHASLIKKAREENDK---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + ++ G + +    F  E +     +    V V 
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLDKDSSLCDEFGANLI----FNPEASEMYPNKIYSHVNVG 110

Query: 115 WL 116
            L
Sbjct: 111 TL 112


>gi|255261309|ref|ZP_05340651.1| pantoate--beta-alanine ligase [Thalassiobium sp. R2A62]
 gi|255103644|gb|EET46318.1| pantoate--beta-alanine ligase [Thalassiobium sp. R2A62]
          Length = 285

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 58/199 (29%), Gaps = 37/199 (18%)

Query: 1   MHVFHNI-EINQSL-----PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL- 53
           M V  +I EI  S+     P    G V  +G    +H GH  ++EQA          V+ 
Sbjct: 5   MIVCRSISEIRSSIAASKKPTDTIGLVPTMGF---LHNGHMALVEQAKA----KASCVIA 57

Query: 54  SFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKF-------TLETANYSAEQ 106
           +   +P    +++         S    +LE  G   ++                  +   
Sbjct: 58  TIYVNPSQFGEATDLDAYPRNESRDLVMLEAAGVDTVLIPDTGDIYPEGDETIVETTRLA 117

Query: 107 FIQKVLVEWLEVKTV---------ITGTKFRFGKDRAGDRGILQKRGEK-----YGFHTV 152
                 V     + V         I    F F      D   LQ          +    +
Sbjct: 118 NTLHGKVRPGHFRGVTTVVARLFNIVQPDFAF--FGEKDFQQLQVIKRMVRDLHFPIQII 175

Query: 153 FIDELRNNKSQIVSSSNIR 171
            +  +R      +SS N+R
Sbjct: 176 GVPTVREADGLAMSSRNVR 194


>gi|222055213|ref|YP_002537575.1| rfaE bifunctional protein [Geobacter sp. FRC-32]
 gi|221564502|gb|ACM20474.1| rfaE bifunctional protein [Geobacter sp. FRC-32]
          Length = 487

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 28/118 (23%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           K  V   G FD +H+GH   L++A    +      NS  +V          ++  +    
Sbjct: 352 KRVVFTNGCFDLLHVGHVKYLQKARTFGDLLIVGLNSDASV--------RALKGETRP-- 401

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           L   + +  IL  +     ++   F  E             L+E L+   ++ G  + 
Sbjct: 402 LIVETERAHILAALDCVDYVVI--FDEE---------TPLKLIEALQPLVLVKGGDYT 448


>gi|154252343|ref|YP_001413167.1| bifunctional protein RfaE [Parvibaculum lavamentivorans DS-1]
 gi|189028291|sp|A7HUC7|HLDE_PARL1 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|154156293|gb|ABS63510.1| rfaE bifunctional protein [Parvibaculum lavamentivorans DS-1]
          Length = 488

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 53/164 (32%), Gaps = 40/164 (24%)

Query: 6   NIEINQSLPNHLKGGVVAIGN----FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            ++  + +    +   + +G     FD +H GH  +LE++  + +   +           
Sbjct: 339 GLKSAEDIVAGWRARGLTVGFTNGCFDLLHPGHVTLLERSRALCDRLVVG---------- 388

Query: 62  IIQSSSPIFTLSPPSI-------QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLV 113
            + S + +  L  P         +  +L  +     ++ ++        + E  I     
Sbjct: 389 -LNSDASVSRLKGPERPVQPDIARATVLAALASVDLVVIFEED------TPEALI----- 436

Query: 114 EWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDEL 157
           + L    ++ G  +   K    D        + +G     +D +
Sbjct: 437 KALRPDILVKGGDYTIDKIVGADF------VQAHGGRVEIVDIV 474


>gi|284008580|emb|CBA75151.1| bifunctional protein HldE [includes [Arsenophonus nasoniae]
          Length = 499

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 27/159 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH + L  A K+ +   + V S +   +  ++       ++P + +  
Sbjct: 367 VMTNGCFDILHAGHVIYLANARKLGDRLIVAVNS-DASTKR-LKGDERP--INPLAQRMT 422

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F  +    + ++ I ++L +      ++ G  ++  +D AG + +
Sbjct: 423 VLGALGSVDWVV--PFEED----TPQRLISEILPD-----VLVKGGDYK-PEDIAGSQEV 470

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                   G     +     N  Q +S++NI   + K  
Sbjct: 471 WAA-----GGEVKVL-----NFEQGLSTTNIINTIMKND 499


>gi|255612202|ref|XP_002539395.1| ethanolamine-phosphate cytidylyltransferase, putative [Ricinus
           communis]
 gi|223506615|gb|EEF22988.1| ethanolamine-phosphate cytidylyltransferase, putative [Ricinus
           communis]
          Length = 328

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   LEQA K+ +   + + + +     +   S P+      + + +
Sbjct: 219 VFTNGCFDLLHSGHVTYLEQARKLGHKLIVGLNT-DRSVSALKGPSRPVIH---EADRAR 274

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +    A++   F  +    +    I ++  ++L     + G+ + 
Sbjct: 275 VLAALESVDAVVL--FDED----TPLNLITRIKPDFL-----VKGSDYT 312


>gi|119946966|ref|YP_944646.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Psychromonas ingrahamii 37]
 gi|150383473|sp|A1SZY2|HLDE_PSYIN RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|119865570|gb|ABM05047.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose
           1-phosphate adenylyltransferase [Psychromonas ingrahamii
           37]
          Length = 476

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 16/108 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A +  N   + V S +   R +     P+   +P   +  
Sbjct: 344 VMTNGCFDILHAGHVSYLNTAREQGNRLIVAVNS-DQSVRNLKGQGRPV---NPVDRRMA 399

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           +L  +G    +I  +FT E    + ++ I ++L + L     + G  +
Sbjct: 400 VLAGLGAVDWVI--EFTEE----TPQRLIAEILPDLL-----VKGGDY 436


>gi|251772785|gb|EES53347.1| Cytidylyltransferase family protein [Leptospirillum
           ferrodiazotrophum]
          Length = 179

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH  +LE+A ++     + + +     R++     P   + P + +  
Sbjct: 42  VFTNGCFDLLHAGHIEVLEKARQLGQILIVALNTD----RSVSNLKGPNRPIVPETNRAV 97

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE-VKTVITGTKFRFGKDR 133
           ++  +   +     F  ET     E+ +  VLV+  +     I G+     ++ 
Sbjct: 98  VMAALECVS-YVTFFDEETPRLLIERILPDVLVKGGDWPVERIVGSDIVLARNG 150


>gi|58337792|ref|YP_194377.1| hypothetical protein LBA1527 [Lactobacillus acidophilus NCFM]
 gi|227904442|ref|ZP_04022247.1| nucleotidyltransferase [Lactobacillus acidophilus ATCC 4796]
 gi|73921032|sp|Q5FIX8|Y1527_LACAC RecName: Full=UPF0348 protein LBA1527
 gi|58255109|gb|AAV43346.1| hypothetical protein LBA1527 [Lactobacillus acidophilus NCFM]
 gi|227867817|gb|EEJ75238.1| nucleotidyltransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 383

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+ +H GH  +L QA  IA   PI VL         +Q       +     + K   + G
Sbjct: 10  FNPLHSGHEFLLNQARLIAKKDPIVVL----MSGNYVQRGE--MAIMSKWDRAKAALQSG 63

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              +    F+     A+  +   I ++    L V  ++ G
Sbjct: 64  ADLVFETPFSTAVEPADLFSLGNIDQLA--KLGVTDLVFG 101


>gi|229178047|ref|ZP_04305419.1| Pantothenate synthetase [Bacillus cereus 172560W]
 gi|228605535|gb|EEK62984.1| Pantothenate synthetase [Bacillus cereus 172560W]
          Length = 282

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 68/223 (30%), Gaps = 49/223 (21%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+        V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIVTTVQEMQQITNELRASGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANY-SAEQFIQKVL 112
              +P      +  +        +++ + ++ G   L    F         AEQ     +
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAEQTATVEV 109

Query: 113 VEWLEVKTVITGT-----------------------KFRFGKDRAGDRGILQKRGEKYGF 149
           V+      V+ G                        +  FG   A    +++     +  
Sbjct: 110 VKR---TDVLCGQQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQVAVIEGFVTDFNI 166

Query: 150 HTVFIDE--LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRF 190
               +    +R       SS N+   L++     A HL     
Sbjct: 167 PVTIVPVDIVREEDGLAKSSRNV--YLSQDEREEALHLYRSLC 207


>gi|323336926|gb|EGA78183.1| Met3p [Saccharomyces cerevisiae Vin13]
 gi|323347915|gb|EGA82175.1| Met3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 511

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREXNAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR-FGKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|284989060|ref|YP_003407614.1| rfaE bifunctional protein [Geodermatophilus obscurus DSM 43160]
 gi|284062305|gb|ADB73243.1| rfaE bifunctional protein [Geodermatophilus obscurus DSM 43160]
          Length = 464

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH   L  A  + +   +  ++ +   R +  SS P   L   +
Sbjct: 330 GGTVVATGGCFDLLHPGHVATLRAARGLGD-CLVVCINSDDSVRRLKGSSRP---LVTAA 385

Query: 77  IQEKILEKMG-FSALIRYKFTLE 98
            + ++LE +    A++   F  +
Sbjct: 386 DRARVLEALEFVDAVVV--FDED 406


>gi|305432413|ref|ZP_07401575.1| ATP-sulfurylase [Campylobacter coli JV20]
 gi|304444452|gb|EFM37103.1| ATP-sulfurylase [Campylobacter coli JV20]
          Length = 674

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 62/178 (34%), Gaps = 30/178 (16%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH  +  ++L  H    +V+  +FD +H  H  +    I  A+   + V         + 
Sbjct: 427 FH--KTKENLNAHKITAIVS--SFDPLHRAHERMFRWTIDKAD---LVV---------VF 470

Query: 64  QSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLVEW 115
              S         +++  L+K     +    +  +      L  A+ +    ++ +L + 
Sbjct: 471 LVESFDANGFDFDLKQNYLKKFIQNYLPPDRIFIFPLKDINLFHAHLNP--SLESILAKS 528

Query: 116 LEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           L    ++ G          D    + IL    + Y    + + E +  +  +++ S+ 
Sbjct: 529 LGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYDIEVIVLPEFVFCDACRMIVSTR 586


>gi|325297426|ref|YP_004257343.1| Pantothenate synthetase [Bacteroides salanitronis DSM 18170]
 gi|324316979|gb|ADY34870.1| Pantothenate synthetase [Bacteroides salanitronis DSM 18170]
          Length = 281

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 33/197 (16%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIG---NFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +   I   ++  + L+G    IG       +H GH  ++++A+   +   + V+S   
Sbjct: 1   MELIQTIRELRAKLDALRGEGKTIGLVPTMGALHAGHASLVKRAVAEND---VVVVSDFV 57

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQFIQ 109
           +P                    ++LE  G           +     T   +       + 
Sbjct: 58  NPTQFNDKDDLAKYPRTLDADCRLLESCGAAFVFAPSVEEIYPEPDTRTFS----YAPLD 113

Query: 110 KVLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
            V+                     ++  T+  FG+       I+++   +Y F    +  
Sbjct: 114 TVMEGKYRPGHFNGVCQIVSKLFLIVEPTRAYFGEKDFQQLAIIREMVRRYPFDLQIVGC 173

Query: 155 DELRNNKSQIVSSSNIR 171
             +R      +SS N R
Sbjct: 174 PIVREADGLALSSRNAR 190


>gi|238018197|ref|ZP_04598623.1| hypothetical protein VEIDISOL_00021 [Veillonella dispar ATCC 17748]
 gi|237864668|gb|EEP65958.1| hypothetical protein VEIDISOL_00021 [Veillonella dispar ATCC 17748]
          Length = 444

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D  H GH+ +L+ A  + +   + V S  F+       +S            +
Sbjct: 4   VITYGTYDLFHEGHYNLLKNAKALGDYLIVGVTSDYFD-------KSRGKFNVRDSLMTR 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDR 137
              +   GF+  I  +          E F QK+  ++   V     G+ +       G  
Sbjct: 57  IDNVRATGFADEIVVE----------EYFGQKIDDIKRFNVDIFTVGSDW------EGYF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L +  +      V++      ++Q +SS+ IR 
Sbjct: 101 DYLNEYCK-----VVYLP-----RTQGISSTQIRN 125


>gi|149908614|ref|ZP_01897276.1| ADP-heptose synthase [Moritella sp. PE36]
 gi|149808448|gb|EDM68385.1| ADP-heptose synthase [Moritella sp. PE36]
          Length = 473

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 20/111 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH   L  A K+     + V        ++  ++ S     ++    +
Sbjct: 343 VMTNGCFDILHAGHVSYLNSARKLGQRLILAV----NSDASVRGLKGSGRP--INTCDRR 396

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             +L  +G    ++  +FT E    + E+ I ++L +      ++ G  ++
Sbjct: 397 MTVLAALGAVDWVV--EFTEE----TPERLISELLPD-----VLVKGGDYK 436


>gi|226954314|ref|ZP_03824778.1| pantoate--beta-alanine ligase [Acinetobacter sp. ATCC 27244]
 gi|294649359|ref|ZP_06726790.1| pantoate--beta-alanine ligase [Acinetobacter haemolyticus ATCC
           19194]
 gi|226834940|gb|EEH67323.1| pantoate--beta-alanine ligase [Acinetobacter sp. ATCC 27244]
 gi|292824729|gb|EFF83501.1| pantoate--beta-alanine ligase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 281

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 26/169 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +GN   +H GH  ++  A KI +   + V+S   +P                   
Sbjct: 25  GFVPTMGN---LHEGHLTLVRAAKKICD---VVVVSIFVNPIQFGAGEDFDNYPRTLEQD 78

Query: 79  EKILEKMGFSALI------RYKFTLETANYSAEQFIQKVLVE-----WLEVKTVI----- 122
            ++L  +G   +        Y       N S  Q    +  +     +  V  V+     
Sbjct: 79  SRLLADVGCDIIFAPSVEQMYGTQPRLTNISVGQITDDLCGKSRPGHFDGVAVVVTKLFN 138

Query: 123 -TGTKFR-FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSS 167
                +  FG+       ++++  +        + +  +R      +SS
Sbjct: 139 MVQPDYAFFGQKDYQQLAVIRQLVQDLNMPLEVIGVPIVRAEDGLALSS 187


>gi|29349716|ref|NP_813219.1| pantoate--beta-alanine ligase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253569919|ref|ZP_04847328.1| pantothenate synthetase [Bacteroides sp. 1_1_6]
 gi|81586611|sp|Q89ZR8|PANC_BACTN RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|29341626|gb|AAO79413.1| pantoate--beta-alanine ligase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840300|gb|EES68382.1| pantothenate synthetase [Bacteroides sp. 1_1_6]
          Length = 282

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 35/212 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+    L+      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELTALRAQGKKVGLVPTMG---ALHAGHASLVKRSVSEN---GVTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +             ++LE  G           +     T E + Y+   
Sbjct: 55  VFVNPTQFNDKNDLAKYPRTLDADCRLLEDCGAAFAFAPSVEEMYPQPDTREFS-YAPLD 113

Query: 107 FIQKVL---VEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
            + +       +  V  ++             FG+       I+++   +  +    +  
Sbjct: 114 TVMEGAFRPGHFNGVCQIVSKLFDAVQPDRAYFGEKDFQQLAIIREMVRQMDYKLEIVGC 173

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             +R      +SS N R  L+     NA ++ 
Sbjct: 174 PIVREEDGLALSSRNKR--LSARERENALNIS 203


>gi|328949773|ref|YP_004367108.1| Tagatose-bisphosphate aldolase [Marinithermus hydrothermalis DSM
           14884]
 gi|328450097|gb|AEB10998.1| Tagatose-bisphosphate aldolase [Marinithermus hydrothermalis DSM
           14884]
          Length = 341

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 9/73 (12%)

Query: 250 MVPNGPLLLESFIFDFSQEIYG-QRCTVSF---FDYLRPEIKFKDIEKLKIYMGEDEKKA 305
                P  + +++ +FS+  YG     V F     ++R    F   E        D ++A
Sbjct: 182 FAKVKPKYVAAYMEEFSKPHYGVDVLKVEFPVNVKFVRGMRSFAGGEA-----AYDREEA 236

Query: 306 RKILESSYPLSER 318
           ++ L+ +   +++
Sbjct: 237 KEHLQRAAEAAKK 249


>gi|317476806|ref|ZP_07936049.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316906981|gb|EFV28692.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 448

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 67/212 (31%), Gaps = 48/212 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---FNPHPRTIIQSSSPIFTLSPPSI 77
           V+  G +D +H GH  +L +A ++ +   + V +   F+       +    +   +    
Sbjct: 4   VITYGTYDLLHQGHINLLRRAKELGDYLIVGV-TNDNFD-------RDRGKLNVRNNVLE 55

Query: 78  QEKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           + + ++  GF   +I      +      +       ++  +V     G+ +       G 
Sbjct: 56  RIEAVKATGFADQIII----EDYMGQKIDD------IQKYDVDIFAIGSDWT------GK 99

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG-------HVLNAAHLLGYR 189
              L +  +      V++      +++ +SS+ +R    +            A       
Sbjct: 100 FDYLNEYCK-----VVYLP-----RTEGISSTMLREVSQEDIKLGVIGCGRTANKFANEI 149

Query: 190 FTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
             +    I        + F  AN   S   + 
Sbjct: 150 PFVSGGKITA---VYDIDFDQANQYASNYNVP 178


>gi|227877354|ref|ZP_03995425.1| phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|256848712|ref|ZP_05554146.1| phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|262045880|ref|ZP_06018844.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           MV-3A-US]
 gi|227863022|gb|EEJ70470.1| phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|256714251|gb|EEU29238.1| phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|260573839|gb|EEX30395.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           MV-3A-US]
          Length = 161

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH    ++A +I +   +  ++           ++    L  P  +  ++  
Sbjct: 8   GSFDPITNGHVETAKKAAEIFDKVYVVAMT-----------NTAKKYLFTPEERADLIR- 55

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
               AL      +E      E  +   L   L  K ++ G      FR+ ++ AG     
Sbjct: 56  ---DALREIP-NIEVLERPEEVTVN--LAHELHAKVIVRGVRNSADFRYEQEIAG----- 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               +K       +    + ++  V+SS I+  
Sbjct: 105 --INKKLAPDVNTVLLFTSPENSFVASSMIKEL 135


>gi|92112153|ref|YP_572081.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Chromohalobacter salexigens DSM 3043]
 gi|119365063|sp|Q1R1M6|HLDE_CHRSD RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|91795243|gb|ABE57382.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Chromohalobacter
           salexigens DSM 3043]
          Length = 476

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I+  ++     +  V+  G FD +H GH   LEQA ++ +   + V        ++ +  
Sbjct: 329 IDAVRAAKLRGERVVMTNGCFDILHAGHVAYLEQAKRLGDRLVVAV----NDDASVGRLK 384

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   ++    + ++L  +     ++   F  E    +  + I +VL +      ++ G 
Sbjct: 385 GPKRPINALERRMQVLAGLSAVDWVV--PFGEE----TPARLIAEVLPD-----VLVKGG 433

Query: 126 KFR 128
            +R
Sbjct: 434 DYR 436


>gi|268563767|ref|XP_002638929.1| Hypothetical protein CBG22156 [Caenorhabditis briggsae]
 gi|187022038|emb|CAP38808.1| hypothetical protein CBG_22156 [Caenorhabditis briggsae AF16]
          Length = 396

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 26/177 (14%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +E +  +    K  V+  G FD +H GH ++L +AI++A+   +  ++     + +I   
Sbjct: 83  LESSGKIEKKYKKVVLG-GTFDRLHNGHKVLLNKAIELASEEIVVGVTD----KEMIIKK 137

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLET---ANYSAEQFIQ----KVLVEWLEVK 119
           S    + P   + +             +F  +    A  + E  I      + +  LE  
Sbjct: 138 SLYEMIEPVEYRMRK----------VVEFVEDVSGEAKCTTEPIIDPYGPSIRIPDLEA- 186

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTAL 174
            +I   +   G D    R +     +        ++  ++  N+++I SSS  R  L
Sbjct: 187 -IIVSRETVKGGDAVNKRRLENGMSQLEVIVVELVEGSDVILNETKISSSSRRREDL 242


>gi|317010289|gb|ADU84036.1| pantoate--beta-alanine ligase [Helicobacter pylori SouthAfrica7]
          Length = 276

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 16/121 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K     P T++S   
Sbjct: 1   MRALETIAALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKEN---PHTIVSIFV 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
           +P     +        P      + E +G SA+    F  + +     +  Q++    L 
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCETLGVSAV----FAPKISEMYPYEAEQRL---KLH 107

Query: 118 V 118
            
Sbjct: 108 A 108


>gi|269797993|ref|YP_003311893.1| pantoate/beta-alanine ligase [Veillonella parvula DSM 2008]
 gi|269094622|gb|ACZ24613.1| pantoate/beta-alanine ligase [Veillonella parvula DSM 2008]
          Length = 280

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 30/191 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGN-----FDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M     IE  ++  N  +     IG      F  +H GH  +++QA K  NN  + V  F
Sbjct: 1   MEFITTIENVRNTVNSWRKEGYTIGFVPTMGF--LHEGHAALIDQARK--NNDKVIVSIF 56

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLET----------ANYSAE 105
              P    ++          +  +K+ E  G   LI      E           A+ S  
Sbjct: 57  VN-PIQFGENEDLSTYPRDINSDKKLCESHGVD-LIFAPNPEEMYQDKKAFVNIADLSDT 114

Query: 106 QFIQKVLVEWLEVKTVITGT-------KFRFGKDRAGDRGILQKRGEKYGFHT--VFIDE 156
               +  + +  V TV+             FG+  A    I++K      F    + +  
Sbjct: 115 LCGIRRPIHFKGVCTVVAKFFNIIQPTNAYFGEKDAQQLAIIRKMVFDLNFPVNIIGVPI 174

Query: 157 LRNNKSQIVSS 167
           +R       SS
Sbjct: 175 VREEDGLAKSS 185


>gi|270263022|ref|ZP_06191292.1| pantothenate synthetase [Serratia odorifera 4Rx13]
 gi|270042710|gb|EFA15804.1| pantothenate synthetase [Serratia odorifera 4Rx13]
          Length = 284

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A     ++ I V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVDEARA---HADIVVVSIFVNPMQFERPDDLARYPRTLQEDSEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            +     +    F    A+   +   Q+  V+   + T++ G                  
Sbjct: 83  TRRNVDLV----FAPAPADVYPQGLEQQTYVDVPGISTMLEGASRPGHFRGVATIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSS 167
                    FG+       +++K     G     V +  +R      +SS
Sbjct: 139 NLVQPNLACFGEKDYQQLALIRKMVADMGYDIDIVGVPTVRAKDGLALSS 188


>gi|255023105|ref|ZP_05295091.1| glycerol-3-phosphate cytidylyltransferase (gct) [Listeria
           monocytogenes FSL J1-208]
          Length = 127

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 33/155 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD IH GH  +LE+A  + +   + + +                       ++ 
Sbjct: 4   VITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDE------FNRIKHKEAYHNFEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I           + EQ ++   V+  ++   + G  +       G    
Sbjct: 58  ILEAIRYVDEVIP--------ETNWEQKLED--VKNRDIDIFVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+          V++      ++  +S+S I+  L
Sbjct: 102 LKPYC-----EVVYLP-----RTDGISTSKIKDDL 126


>gi|119898988|ref|YP_934201.1| putative phosphoenolpyruvate phosphomutase [Azoarcus sp. BH72]
 gi|119671401|emb|CAL95314.1| putative phosphoenolpyruvate phosphomutase [Azoarcus sp. BH72]
          Length = 434

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 31/153 (20%)

Query: 28  DGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-G 86
           D +H GH  I+  A  +     I +L+        I S   I    P   +  ++E + G
Sbjct: 13  DLVHSGHLNIIRHAASLG-EVVIGLLT-----DKAIASYKRIPY-MPFEQRMAVVENIKG 65

Query: 87  FSALIR---YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
            S ++      +T                 E L+   V+ G  +R G  R   + ++   
Sbjct: 66  VSRVVPQTTLDYTPNL--------------ELLKPDYVVHGDDWREGVQRETRQKVIDTL 111

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +++G   V I       +  +SS+ ++ A+ +
Sbjct: 112 -KQWGGELVEIP-----YTAGISSTRLQAAIKE 138


>gi|157873807|ref|XP_001685405.1| ethanolamine-phosphate cytidylyltransferase [Leishmania major
           strain Friedlin]
 gi|68128477|emb|CAJ08605.1| putative ethanolamine-phosphate cytidylyltransferase [Leishmania
           major strain Friedlin]
          Length = 402

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 22/151 (14%)

Query: 5   HNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           +++   +++P  + G V     G FD +H GH   L +A ++ +   +   S       +
Sbjct: 35  YSLFCTEAIPPKVPGTVRIWVDGCFDMLHFGHANALRRARRLGDELFVGCHSDE----EV 90

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++   P   +     + + L        ++         NY     ++   +E  E+  V
Sbjct: 91  MRFKGPP--IMHAEERYEALRACKWVDHVVE--------NYPYCTRLKD--IERFEIDYV 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
           + G       +        Q+  +   F  V
Sbjct: 139 VHGDDISVDLNGRNS---YQEIIDAGKFKVV 166


>gi|329947398|ref|ZP_08294602.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328525148|gb|EGF52199.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 156

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 18/122 (14%)

Query: 8   EINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           ++   +P  ++   V+  G+FD +H GH  +L +A  + +   + + +          S 
Sbjct: 11  KLTAPIPRTIQMKRVITYGSFDLLHYGHIELLRRAKAMGDYLIVALST-----DEFSASK 65

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGT 125
                 S    +  +        ++               + QK   ++   +   + G 
Sbjct: 66  GKQAYFSYEQRKVMLEAVRYVDLVV-----------PERTWGQKSQDIDEYGIDVFVIGD 114

Query: 126 KF 127
            +
Sbjct: 115 DW 116


>gi|319939791|ref|ZP_08014147.1| hypothetical protein HMPREF9459_01135 [Streptococcus anginosus
           1_2_62CV]
 gi|319811004|gb|EFW07319.1| hypothetical protein HMPREF9459_01135 [Streptococcus anginosus
           1_2_62CV]
          Length = 363

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 24/134 (17%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +LEQ         I  +S        +Q   P   +     + ++  + G
Sbjct: 10  FNPFHNGHKYLLEQV----KGLKIVAMS-----GNFVQRGEPA--IVDKWTRAEMALRNG 58

Query: 87  FSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGT----KFR-----FGKDRAG 135
              ++   F    A  SA+ F Q    ++E L V  +  GT     ++     +G ++  
Sbjct: 59  ADLVVELPF--LVAVQSADYFAQGAVDILERLGVDKLAFGTEENLDYQHFSQIYGDNQQN 116

Query: 136 DRGILQKRGEKYGF 149
               LQ       +
Sbjct: 117 MVDYLQSLPADLSY 130


>gi|312135047|ref|YP_004002385.1| hypothetical protein Calow_1022 [Caldicellulosiruptor owensensis
           OL]
 gi|311775098|gb|ADQ04585.1| protein of unknown function DUF795 [Caldicellulosiruptor owensensis
           OL]
          Length = 400

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  V+ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFVVFGSEC-------GDIDKLKEAAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|302871967|ref|YP_003840603.1| hypothetical protein COB47_1325 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574826|gb|ADL42617.1| protein of unknown function DUF795 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 400

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  V+ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFVVFGSEC-------GDIDKLKEAAKY 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|292491193|ref|YP_003526632.1| pantoate/beta-alanine ligase [Nitrosococcus halophilus Nc4]
 gi|291579788|gb|ADE14245.1| pantoate/beta-alanine ligase [Nitrosococcus halophilus Nc4]
          Length = 283

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 17/139 (12%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M     I   +S     +        V  +GN   +H GH  ++ +A ++A+     V+S
Sbjct: 1   MQTLRTIAAVRSAVECWRTSRERVALVPTMGN---LHAGHLALVARAAQLADR---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                   ++ L + G + L    F     +   +Q      VE
Sbjct: 55  IFVNPLQFNDQDDYARYPRTFEKDQQWLAEHGVAVL----FAPLLEDIYPQQLENVTRVE 110

Query: 115 WLEVKTVITGTKFRFGKDR 133
              +  ++ G   R G  R
Sbjct: 111 VPGLSDILEGA-SRLGHFR 128


>gi|116249028|ref|YP_764869.1| pantoate--beta-alanine ligase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|158706039|sp|Q1M4A1|PANC_RHIL3 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|115253678|emb|CAK12071.1| putative pantoate--beta-alanine ligase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 303

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF +I+  +   + L+      G V  +G    +H GH  ++ +A    +   I V+S
Sbjct: 1   MRVFSSIDELRHTLDALRRQGRTVGLVPTMGY---LHAGHMELVSRARAEND---IVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L + G + L    F+    +  +   +  V V 
Sbjct: 55  IFVNPLQFGPAEDLSKYPRDLERDAAMLRQAGVNFL----FSPGVEDMYSRPMLTVVDVP 110

Query: 115 WLE 117
            L 
Sbjct: 111 DLG 113


>gi|320534577|ref|ZP_08035026.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320133198|gb|EFW25697.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 139

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 19/109 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G+FD +H GH  +L +A  + +   + + +          S       S    +  
Sbjct: 4   VITYGSFDLLHYGHIDLLRRAKAMGDYLIVALST-----DEFSASKGKRAYFSYEQRKAM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTKF 127
           +        ++             EQ   +    V+   +   + G  +
Sbjct: 59  LEAVRYVDMVV------------PEQTWGQKSRDVDEYGIDVFVIGDDW 95


>gi|301123691|ref|XP_002909572.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100334|gb|EEY58386.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 354

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 31/162 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  +L  A+ I  N  +  ++ +    ++++  S    + P   ++  +  
Sbjct: 214 GTFDHLHNGHKKLLSLAVSICANRVLVGVTAD----SMLKKKSHAELVEPLEKRKSAVRD 269

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEW--------LEVKTVITGTKFRFGKDRAGD 136
                          A  + +     V +E          E   ++  T+   G  +  D
Sbjct: 270 Y-------------IAFLNPQIVADIVTIEDPFGPAIVVPEPAAMVVSTETLTGAAKIND 316

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             + +   +   F        R  +S  +SSS IR  +    
Sbjct: 317 IRVGRGLPKLRIFAC------RRTESSTLSSSCIRAKIAASR 352


>gi|257064163|ref|YP_003143835.1| Glycerol-3-phosphate cytidylyltransferase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791816|gb|ACV22486.1| Glycerol-3-phosphate cytidylyltransferase [Slackia
           heliotrinireducens DSM 20476]
          Length = 127

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 63/157 (40%), Gaps = 33/157 (21%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +  G +D +H GH  +L +A K+ +   + + +          +     +     +++++
Sbjct: 2   LTYGTYDLLHYGHIRLLRRASKLGDYLVVALSTDE------FNAGKGKASFYSYGVRKEM 55

Query: 82  LEKMG-FSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           LE +     +I             E++ QK+  V+  ++  V+ G  +R G  R     +
Sbjct: 56  LESIRYVDLVI-----------PEERWDQKIDDVKKYDIDIVVMGGDWR-GDPR---FEV 100

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           L+   E           +  +++  +SS++++  L  
Sbjct: 101 LKDYCEV----------VYLDRTDGISSTDVKNELKH 127


>gi|153933524|ref|YP_001382808.1| pantoate--beta-alanine ligase [Clostridium botulinum A str. ATCC
           19397]
 gi|153934894|ref|YP_001386375.1| pantoate--beta-alanine ligase [Clostridium botulinum A str. Hall]
 gi|229485645|sp|A7FR59|PANC_CLOB1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|152929568|gb|ABS35068.1| pantoate--beta-alanine ligase [Clostridium botulinum A str. ATCC
           19397]
 gi|152930808|gb|ABS36307.1| pantoate--beta-alanine ligase [Clostridium botulinum A str. Hall]
          Length = 281

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M++ + I+  + +    K      G V  +G    +H GH  ++++A +  +     ++S
Sbjct: 1   MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGY---LHEGHTSLIKKAREENDK---VIVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     + EK G   +    F  ET+     +    + V+
Sbjct: 55  IFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLI----FNPETSEMYPNKIYSHINVD 110

Query: 115 WL 116
            L
Sbjct: 111 IL 112


>gi|326503692|dbj|BAJ86352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 229

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 16/165 (9%)

Query: 20  GVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V IG  FD +H GHHL L+ A ++A    +  +   P     +      + + P   +
Sbjct: 60  AAVVIGGTFDRLHRGHHLFLQAAAELARERVVIGVCDGPM----LAKKKYGYLIQPIETR 115

Query: 79  EKILEKMGFSALIRYKFTLETANYSA--EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + ++      +   K  LE  +     + +   ++ E LE   ++   +   G   A +
Sbjct: 116 MENVK----DYIKSIKPDLEV-HVEPIIDPYGPSIVDEALEA--IVVSKETLPG-GHAVN 167

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           R   ++   +     V +   ++     +SS+  R    +  +  
Sbjct: 168 RKRAERGLTQLEIEVVELVPEKST-GNKISSTGFRKIEAEKALQQ 211


>gi|309807136|ref|ZP_07701113.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
 gi|309810244|ref|ZP_07704089.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|308166487|gb|EFO68689.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
 gi|308169516|gb|EFO71564.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
          Length = 387

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  I+ N PI VL         +Q      ++     + K     G   
Sbjct: 14  FHSGHEFLLNQARLISQNKPIVVL----MSGNYVQRGQ--ISICDKWSRAKSALLSGADL 67

Query: 90  LIRYKFTLETANYSAEQFIQ--KVLVEWLEVKTVITG 124
           +    F    A   A+ F      ++E L V  ++ G
Sbjct: 68  VFELPF--SYAVQPADIFACGSMKILEQLGVSDLVFG 102


>gi|309805212|ref|ZP_07699264.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
 gi|308165446|gb|EFO67677.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
          Length = 387

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  I+ N PI VL         +Q      ++     + K     G   
Sbjct: 14  FHSGHEFLLNQARLISQNKPIVVL----MSGNYVQRGQ--ISICDKWSRAKSALLSGADL 67

Query: 90  LIRYKFTLETANYSAEQFIQ--KVLVEWLEVKTVITG 124
           +    F    A   A+ F      ++E L V  ++ G
Sbjct: 68  VFELPF--SYAVQPADIFACGSMKILEQLGVSDLVFG 102


>gi|225851457|ref|YP_002731691.1| bifunctional protein RfaE, domain II [Persephonella marina EX-H1]
 gi|225646106|gb|ACO04292.1| bifunctional protein RfaE, domain II [Persephonella marina EX-H1]
          Length = 151

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 29/162 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPS 76
           K  V   G FD IH GH   L++A ++     + V L+ +   R I     P+   +   
Sbjct: 15  KKIVFTNGCFDIIHAGHVDYLKKAKEL--GDILVVGLNSDESIRRIKGKDRPV---NIQE 69

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            ++ +LE +     +I   F  +    + E+ I+++  ++L     + G  ++       
Sbjct: 70  HRKIVLEALKPVDLVII--FDED----TPEKLIKEIKPDFL-----VKGGDWKIENIVGA 118

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           D        + YG   V ID + +     +S++ I   +  G
Sbjct: 119 DF------VQSYGGKVVTIDFVHD-----ISTTRIIQKVKNG 149


>gi|254167415|ref|ZP_04874267.1| Cytidylyltransferase, putative [Aciduliprofundum boonei T469]
 gi|197623678|gb|EDY36241.1| Cytidylyltransferase, putative [Aciduliprofundum boonei T469]
          Length = 149

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-----SPP 75
           V+A G FD +H GH L L +A K+ +   + V              S +  L        
Sbjct: 4   VMATGVFDILHPGHVLFLREAKKLGDELVVVV-----------ARDSTVERLKHKPIMNE 52

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            I+  ++E +      +                     VE +    ++ G   +F     
Sbjct: 53  EIRRFMVESLKPVDRAVLGHKDDMYK-----------TVEDVRPDIIVLGYDQKF----- 96

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            D   +++   K G     +   +   S +  +  I
Sbjct: 97  -DEKEIEEECRKRGIKVKVVRLKKYGDSDLNGTRKI 131


>gi|189028463|sp|A8H086|HLDE_SHEPA RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
          Length = 476

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 61/171 (35%), Gaps = 45/171 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           +  V+  G FD +H GH   L+QA  + +   + V            + + +  L     
Sbjct: 341 ERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAV-----------NTDASVKRLKGEGR 389

Query: 73  --SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +    +  +L  +     ++   F+ +    + ++ I ++L + L     + G  ++ 
Sbjct: 390 PVNSEDRRMTVLAALASVDWVV--PFSED----TPQRIISRLLPDLL-----VKGGDYKV 438

Query: 130 GKDRAGDRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +D AG   ++    + +  GF               +S++ I   +    
Sbjct: 439 -EDIAGGSEVMAAGGQVKVLGFE------------DGISTTAIIQNIMANQ 476


>gi|157960474|ref|YP_001500508.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Shewanella pealeana ATCC 700345]
 gi|157845474|gb|ABV85973.1| rfaE bifunctional protein [Shewanella pealeana ATCC 700345]
          Length = 482

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 61/171 (35%), Gaps = 45/171 (26%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           +  V+  G FD +H GH   L+QA  + +   + V            + + +  L     
Sbjct: 347 ERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAV-----------NTDASVKRLKGEGR 395

Query: 73  --SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +    +  +L  +     ++   F+ +    + ++ I ++L + L     + G  ++ 
Sbjct: 396 PVNSEDRRMTVLAALASVDWVV--PFSED----TPQRIISRLLPDLL-----VKGGDYKV 444

Query: 130 GKDRAGDRGILQK--RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +D AG   ++    + +  GF               +S++ I   +    
Sbjct: 445 -EDIAGGSEVMAAGGQVKVLGFE------------DGISTTAIIQNIMANQ 482


>gi|300361209|ref|ZP_07057386.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
 gi|300353828|gb|EFJ69699.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
          Length = 385

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  +A N PI V+         +Q       +     + K     G   
Sbjct: 13  FHSGHEFLLNQARLVAENDPIIVI----MSGNYVQRGQ--MAIMDKWQRAKAALNSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
           +    F    A   A+ F      ++  L V  +  G
Sbjct: 67  VFELPF--SFAVQPADIFANGSIRMLSNLGVSELFFG 101


>gi|78777949|ref|YP_394264.1| nicotinate-nucleotide adenylyltransferase [Sulfurimonas
           denitrificans DSM 1251]
 gi|123549765|sp|Q30PQ2|NADD_SULDN RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|78498489|gb|ABB45029.1| probable nicotinate-nucleotide adenylyltransferase [Sulfurimonas
           denitrificans DSM 1251]
          Length = 182

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 21/161 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SF-NPHPRTIIQSSS-PIFTLSPPSIQEKI 81
           G+FD  H+GH  I+E   K  +   I ++ +F NP        SS  +  L     +EK 
Sbjct: 9   GSFDPPHIGHEAIIEALKKFKDIDKIIIMPTFLNPFKSNFYAPSSLRVKWLREIFKEEKR 68

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +E   +  L       +       +  + + +E  +   ++ G      K R  +     
Sbjct: 69  VEVSDYEVL-------QNRQVPTIETAKHL-LESYKKIYLVIGADN-LAKLRDWNS--YD 117

Query: 142 KRGEKYGFHTVFIDELRNNK-------SQIVSSSNIRTALT 175
           +  E   F     D++            + +SS+ +R  + 
Sbjct: 118 ELKELVTFVVATRDDIEIPDEFIMLSVDEKISSTQLRENIQ 158


>gi|218894094|ref|YP_002442963.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas aeruginosa LESB58]
 gi|226702250|sp|B7V388|HLDE_PSEA8 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|218774322|emb|CAW30139.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa LESB58]
          Length = 473

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   + V        ++ +      
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGV----NDDASVTRLKGVGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +++V         ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVV------SFAEDTPERLLEQV-----RPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G ++        +  + YG     +  + N+     S++ I   + + 
Sbjct: 435 GVEQVVGA----QIVKAYGGEVRVLGLVENS-----STTAIVEKIRQR 473


>gi|189220112|ref|YP_001940752.1| Panthothenate synthetase [Methylacidiphilum infernorum V4]
 gi|189186970|gb|ACD84155.1| Panthothenate synthetase [Methylacidiphilum infernorum V4]
          Length = 303

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 22/156 (14%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL-EKMGFS 88
           +H GH  ++E+A K+    P+ V  +    +                 ++++L  + G  
Sbjct: 79  LHKGHLCLIEKARKL--GDPLVVSIYVNPTQ--FGPGEDYQVYPRNYEKDRLLCREQGVD 134

Query: 89  ALIRYK--FTLETANYSAEQFIQKVLVEW-------------LEVKTVITGTKFRFGKDR 133
            L      +  E +++  E+ I                    +++  ++  +K  FG   
Sbjct: 135 VLFAPPSLYHEEHSSWVVEEKISLGRCGRSRPGHFKGVATVLMKLFWLVQPSKAVFGWKD 194

Query: 134 AGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSS 167
           A    ++Q+    +      + ++ +R+      SS
Sbjct: 195 AQQLELVQRLARDFYLPMEVIGVETVRDENGLAYSS 230


>gi|329944833|ref|ZP_08292885.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328529766|gb|EGF56659.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 130

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 15/108 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L++A  + +   +  LS +                S    +  
Sbjct: 4   VITYGTYDLLHYGHIAMLKRARALGDFL-VVALSSD----EFNAGKGKRAYFSYEERKAM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +        ++           +  Q +    V+   +   + G  +R
Sbjct: 59  LEAIRYVDLVVP--------ELTWGQKVDD--VDKYGIDVFVMGDDWR 96


>gi|292655814|ref|YP_003535711.1| phosphopantetheine adenylyltransferase [Haloferax volcanii DS2]
 gi|291371907|gb|ADE04134.1| phosphopantetheine adenylyltransferase [Haloferax volcanii DS2]
          Length = 166

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 45/167 (26%)

Query: 21  VVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            VA+G  FD +H GH  + E+A ++   +    L+ +      +   +            
Sbjct: 2   HVALGGTFDPVHDGHLALFERAFEL--GAVTVGLTSDE-----LAPKTRH---------- 44

Query: 80  KILEKMGFSALIRYKFTLETANYS------AEQFIQKVLVEWL----------EVKTVIT 123
                          F    A+        AE++ ++  V  L              +I 
Sbjct: 45  -------VDR-YVRPFDDRKADLEAELRPLAEEYDREFEVRELDKPTGIATEEGFDVLIV 96

Query: 124 GTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
             + R G +R      +++           ++ +     + +SS+ I
Sbjct: 97  SPETRGGGER---VNEIREEKGLKPLRIEVVEHVPAEDGERISSTRI 140


>gi|148265239|ref|YP_001231945.1| rfaE bifunctional protein [Geobacter uraniireducens Rf4]
 gi|189028287|sp|A5G6F4|HLDE_GEOUR RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|146398739|gb|ABQ27372.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose
           1-phosphate adenylyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 490

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 39/171 (22%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           K  V   G FD +H+GH   L++A    +      NS  +V       R +  +  P   
Sbjct: 352 KRLVFTNGCFDLLHVGHVKYLQKARTFGDLLVVGLNSDASV-------RRLKGAERP--- 401

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           L   + +  IL  +     ++   F  +    +  + I     E L+ + ++ G  +   
Sbjct: 402 LIGEAERAHILAALDCVDFVVI--FDED----TPLRLI-----ETLQPQVLVKGGDYT-- 448

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
            +R       ++  E YG     +    + K    S++NI   +  G +  
Sbjct: 449 PERVVG----KEVVESYGGRVELV-TFVDGK----STTNIIEKIRTGSIKE 490


>gi|323304345|gb|EGA58118.1| Met3p [Saccharomyces cerevisiae FostersB]
          Length = 404

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|227357404|ref|ZP_03841759.1| PnuC nicotinamide ribonucleoside uptake permease [Proteus mirabilis
           ATCC 29906]
 gi|227162409|gb|EEI47406.1| PnuC nicotinamide ribonucleoside uptake permease [Proteus mirabilis
           ATCC 29906]
          Length = 414

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 16/178 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   H   +    P   K   V  G F  +H GH  ++++A    +   + +    P  +
Sbjct: 48  MSALHQF-LGLEYPLQQKTIGVIFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDK 106

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQFIQKVLVEWLE 117
            +   +S +      S + + L +  F     +  ++F         +    ++  E ++
Sbjct: 107 ELFI-NSAMSQQPTVSDRLRWLLQT-FKYQKNIRIHEFNEH--GIEPQPHGWEMWSEGIK 162

Query: 118 V--KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              +       F +  +R GD    +      G  TV +D  R+     +S S IR A
Sbjct: 163 AFLQEKQIAPDFIYTSER-GDASQYEAF---LGIETVLVDPERSF--MNISGSQIRQA 214


>gi|164660626|ref|XP_001731436.1| hypothetical protein MGL_1619 [Malassezia globosa CBS 7966]
 gi|159105336|gb|EDP44222.1| hypothetical protein MGL_1619 [Malassezia globosa CBS 7966]
          Length = 575

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     +   +   + + ++ +   G 
Sbjct: 204 MHRAHREL---TVRAARQLQANVLI---HPVVGLTKPGDVDHYTRVRVYQSLMPRYPKGM 257

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG-------DRGI 139
           + L      +  A    E     ++ +   V   I G      GK+  G       D   
Sbjct: 258 AHLALLPLAMRMAG-PREALWHAIIRKNFGVTHFIVGRDHAGPGKNSQGEDFYGPYDAQD 316

Query: 140 L-QKRGEKYGFHTV 152
           L +K  ++ G   V
Sbjct: 317 LVKKHTDELGIEMV 330


>gi|257439025|ref|ZP_05614780.1| pantetheine-phosphate adenylyltransferase [Faecalibacterium
           prausnitzii A2-165]
 gi|257198515|gb|EEU96799.1| pantetheine-phosphate adenylyltransferase [Faecalibacterium
           prausnitzii A2-165]
          Length = 167

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 20/99 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+++A KI ++  + VL         I S+     L     +  +L++
Sbjct: 8   GSFDPVTRGHLDIIKRAAKINDHLIVAVL---------INSAKHP--LFTVEERVALLQE 56

Query: 85  M--GFSALIRYKF---TLETANYSAEQFIQKVLVEWLEV 118
              G   +    F   T+E A          V+V  L  
Sbjct: 57  CCKGIPNVTVESFDGLTVEFAKK----RHASVMVRGLRA 91


>gi|322494179|emb|CBZ29476.1| ethanolamine-phosphate cytidylyltransferase,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 402

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 31/179 (17%)

Query: 5   HNIEINQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           +++   +++P  + G V     G FD +H GH   L QA ++     +   S       +
Sbjct: 35  YSLFCTEAIPPKVPGTVRIWVDGCFDMLHFGHANALRQARRLGCELFVGCHSDE----EV 90

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
           ++   P   +     + + L        ++         NY     ++   VE  E+  V
Sbjct: 91  MRFKGPP--IMHAEERYEALRACKWVDYVVE--------NYPYCTRLKD--VERFEIDYV 138

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           + G       +        Q+  +   F  V        +++ +S++N+  R  L   +
Sbjct: 139 VHGDDISVDLNGRNS---YQEIIDAGKFKVV-------KRTEGISTTNLVGRMLLCTKN 187


>gi|72383003|ref|YP_292358.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. NATL2A]
 gi|108860875|sp|Q46IM3|PANCY_PROMT RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|72002853|gb|AAZ58655.1| cytidylate kinase [Prochlorococcus marinus str. NATL2A]
          Length = 516

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
            +G   G+H GH  ++++A +   N+  I ++S   +P    +               ++
Sbjct: 28  TMG---GLHPGHQYLIQKAKEKKTNTNQIILVSIFVNPLQFSKGEDFKKYPRNIKRDAEL 84

Query: 82  LEKMGFSALIRYKFTLET 99
               G  A+   ++    
Sbjct: 85  AFSAGADAIWAPEYDEVF 102


>gi|119384395|ref|YP_915451.1| pantoate--beta-alanine ligase [Paracoccus denitrificans PD1222]
 gi|158706033|sp|A1B2L1|PANC_PARDP RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|119374162|gb|ABL69755.1| pantothenate synthetase [Paracoccus denitrificans PD1222]
          Length = 282

 Score = 37.8 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 63/233 (27%), Gaps = 38/233 (16%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++  A    +     +++   +PR    +             
Sbjct: 27  GVVPTMG---ALHEGHLSLVRAARASCDR---VIVTLFVNPRQFNNTEDYAKYPRTEHTD 80

Query: 79  EKILEKMGFSALIRYKFTL----------ETANYSAEQFIQKVLVEWLEVKTVI------ 122
             +L  +G  AL                   +  +A          +  V TV+      
Sbjct: 81  AALLAPLGVDALFVPDGDEVYPPDHATVISVSGVTAPLEGAHRPGHFDGVATVVTLLFNM 140

Query: 123 TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSS--------NIR 171
           TG     FG+       ++++  +        +    +R      +SS           R
Sbjct: 141 TGADRAFFGEKDWQQLQLVRRLVQDLKLPVEIVPCPCVRAEDGLALSSRNQRLTAEGRTR 200

Query: 172 TALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEG 224
            A     +  AA  +                    G   A +     + L++G
Sbjct: 201 AAALPRTLFEAARRIEA-----GAPTAEALAAAQEGLEAAGIGPVEYLELRDG 248


>gi|332295148|ref|YP_004437071.1| Pantothenate synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178251|gb|AEE13940.1| Pantothenate synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 279

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF + +  +      +        V  +G    +H GH  ++ +A  +   S I V+S
Sbjct: 1   MRVFFDKKSLRKFLEEKRSAGKTVSLVPTMGY---LHEGHISLVRRARGM---SGIVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              ++L++ G  A+       E      E+ +  V V+
Sbjct: 55  IFVNPIQFGPNEDLDRYPRDLGSDLRLLDREGVDAVFCP--NPE--EMYPEEQLCFVEVK 110

Query: 115 WLEVKTV--------------------ITGTKF-RFGKDRAGDRGILQKRGEKYGFHTVF 153
            L+ K                      I    F  FG+       IL+K  +   F    
Sbjct: 111 GLQDKLCGLFRPGHFKGVCTVVAKLFNIVQPDFAHFGEKDFQQLVILRKMVKDLDFPIKI 170

Query: 154 IDE--LRNNKSQIVSS 167
           +    +R++ +  +SS
Sbjct: 171 VPSPIVRDSDNLALSS 186


>gi|83942960|ref|ZP_00955420.1| pantoate--beta-alanine ligase [Sulfitobacter sp. EE-36]
 gi|83845968|gb|EAP83845.1| pantoate--beta-alanine ligase [Sulfitobacter sp. EE-36]
          Length = 281

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 47/180 (26%), Gaps = 39/180 (21%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A +  +     +++   +P+                   + L  +    
Sbjct: 35  LHQGHLSLVRAAKEACDR---VIVTIFINPKQFNNPDDYKNYPRTEEEDARKLIALKADV 91

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVIT-------GTKFR 128
           +       +        F   V VE +               V T++T         K  
Sbjct: 92  VYV----PDGEQMYPNGFATTVSVEGITQGLCGAHRAGHFDGVATIVTKLFTQTQADKAF 147

Query: 129 FGKDRAGDRGILQ-----KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           FG+    D   LQ      R        +    +R      +SS   R  L        A
Sbjct: 148 FGEK---DYQQLQVVTRLARDLDLPIEVIGCPTIREEDGLAMSS---RNLLLSDRARTWA 201


>gi|319790280|ref|YP_004151913.1| pantoate/beta-alanine ligase [Thermovibrio ammonificans HB-1]
 gi|317114782|gb|ADU97272.1| pantoate/beta-alanine ligase [Thermovibrio ammonificans HB-1]
          Length = 283

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 10/98 (10%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++ +A +  +   + V+S   +P                   
Sbjct: 25  GFVPTMGY---LHEGHLSLVRRAKEEND---VVVVSIFVNPTQFGPGEDFERYPRDLERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
            K+LE  G + L    F  +        F   V VE L
Sbjct: 79  RKLLEAEGVNYL----FLPDARQMYPRGFSTWVEVEGL 112


>gi|157147430|ref|YP_001454749.1| pantoate--beta-alanine ligase [Citrobacter koseri ATCC BAA-895]
 gi|157084635|gb|ABV14313.1| hypothetical protein CKO_03229 [Citrobacter koseri ATCC BAA-895]
          Length = 307

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E+A   A+   + V+S   +P    +    +          + L
Sbjct: 52  TMGN---LHDGHMKLVEEAKARAD---VVVVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 105

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------------------ 124
            K     +    F    A    +    +  V+   + T++ G                  
Sbjct: 106 NKRKVDFV----FAPAPAEIYPQGTDGQTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLF 161

Query: 125 ----TKF-RFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSS 167
                    FG+       +++K     G     V +  +R      +SS
Sbjct: 162 NLVQPDIACFGEKDFQQLALIRKMVADMGYDIEIVGVPIIRAKDGLALSS 211


>gi|66826665|ref|XP_646687.1| hypothetical protein DDB_G0270298 [Dictyostelium discoideum AX4]
 gi|74858270|sp|Q55BZ4|PCY2_DICDI RecName: Full=Ethanolamine-phosphate cytidylyltransferase; AltName:
           Full=CTP:phosphoethanolamine cytidylyltransferase;
           AltName: Full=Phosphorylethanolamine transferase
 gi|60474562|gb|EAL72499.1| hypothetical protein DDB_G0270298 [Dictyostelium discoideum AX4]
          Length = 360

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA ++ +   + V     H    I  +           + K +  
Sbjct: 16  GCFDLMHFGHANALRQARELGDILVVGV-----HTDEEIAKNKGPPV-MNEQERYKAVRA 69

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                    K+  E A  +     ++  ++ L     + G     G D       ++K G
Sbjct: 70  C--------KWADEVAEGAPYTLTEEY-LDSLNCDFCVHGEDISVGADGKDVYEGIKKSG 120

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +               +++ VS++ +  R  L    
Sbjct: 121 KFRFIK----------RTEGVSTTELVGRMLLCTKD 146


>gi|256020219|ref|ZP_05434084.1| cytidyltransferase-like protein [Shigella sp. D9]
 gi|260853458|ref|YP_003227349.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli O26:H11 str. 11368]
 gi|260866404|ref|YP_003232806.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli O111:H- str. 11128]
 gi|300817281|ref|ZP_07097499.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli MS 107-1]
 gi|301646802|ref|ZP_07246655.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli MS 146-1]
 gi|307136849|ref|ZP_07496205.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli H736]
 gi|307315206|ref|ZP_07594785.1| cytidyltransferase-related domain protein [Escherichia coli W]
 gi|331640704|ref|ZP_08341851.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli H736]
 gi|332281381|ref|ZP_08393794.1| glycerol-3-phosphate cytidylyltransferase [Shigella sp. D9]
 gi|257752107|dbj|BAI23609.1| predicted glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli O26:H11 str. 11368]
 gi|257762760|dbj|BAI34255.1| predicted glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli O111:H- str. 11128]
 gi|300530257|gb|EFK51319.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli MS 107-1]
 gi|301075008|gb|EFK89814.1| putative glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli MS 146-1]
 gi|306905387|gb|EFN35924.1| cytidyltransferase-related domain protein [Escherichia coli W]
 gi|315059479|gb|ADT73806.1| predicted glycerol-3-phosphate cytidylyltransferase [Escherichia
          coli W]
 gi|315616836|gb|EFU97453.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli 3431]
 gi|323158034|gb|EFZ44134.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli
          EPECa14]
 gi|323171052|gb|EFZ56701.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli
          LT-68]
 gi|323178503|gb|EFZ64081.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli 1180]
 gi|323181537|gb|EFZ66957.1| glycerol-3-phosphate cytidylyltransferase [Escherichia coli 1357]
 gi|323379963|gb|ADX52231.1| cytidyltransferase-related domain protein [Escherichia coli KO11]
 gi|331040078|gb|EGI12286.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli H736]
 gi|332103733|gb|EGJ07079.1| glycerol-3-phosphate cytidylyltransferase [Shigella sp. D9]
          Length = 131

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
            V+  G FD  H+GH  +L++A  +     + V
Sbjct: 2  KTVITFGTFDVFHVGHLRLLQRARALGERLLVGV 35


>gi|291459332|ref|ZP_06598722.1| [citrate (pro-3S)-lyase] ligase [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418586|gb|EFE92305.1| [citrate (pro-3S)-lyase] ligase [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 369

 Score = 37.8 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 10/172 (5%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
            GH  ++++A +++    + +LS       F+   R I++ +  I  L        I+  
Sbjct: 180 RGHLYLIQRAAELSRLLHLFILSEEKSLIPFSVRKRLILEGTRGIPNLIVHDSGSYIISS 239

Query: 85  MGFSALIRYKFTLETANYSAEQF-IQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
             F A      T    + +A    +   +   L++     G +      R  +  ++  R
Sbjct: 240 ATFPAYFLKDDTAAIESQAALDLQVFSQIAHALDIGARFVGEEPNSRVTRLYN-ELMASR 298

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESD 195
             K G     I  L  N  + +S+S +R A+ K        LL         
Sbjct: 299 LPKEGIRCRIIPRLEEN-GKPISASTVRLAIQKDDFETLKRLLPESGYSYFC 349


>gi|296391839|ref|ZP_06881314.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas aeruginosa PAb1]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   + V        ++ +      
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGV----NDDASVTRLKGVGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +++V         ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVV------SFAEDTPERLLEQV-----RPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G ++        +  + YG     +  + N+     S++ I   + + 
Sbjct: 435 GVEQVVGA----QIVKAYGGEVRVLGLVENS-----STTAIVEKIRQK 473


>gi|89901187|ref|YP_523658.1| citrate lyase ligase [Rhodoferax ferrireducens T118]
 gi|89345924|gb|ABD70127.1| Citrate lyase ligase [Rhodoferax ferrireducens T118]
          Length = 364

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 38/178 (21%)

Query: 33  GHHLILEQAIKIAN-------NSPITVLSFN-----------PHPRTIIQSSSPIFTLSP 74
           GH  + +QA    +           +++++              PRT +   S I+ +S 
Sbjct: 175 GHQYLAQQASDACDWLHVFVVGENSSLITYEDRLALVRDGLKNMPRTTVHPGS-IYMISK 233

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGK 131
            +     L+  G                ++A   I  ++ +   L +     GT+     
Sbjct: 234 ATFPSYFLKDRGIVDQC-----------HTALDLIIFREHVAPALGITHRFVGTEPFCEV 282

Query: 132 DRAGDRG----ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
            +  +      ++Q   +      V ++ +  +    +S+S +R  L      + A L
Sbjct: 283 TKKYNADMKHWLMQAASKAPAIEVVELERI-AHSGMAISASKVRRYLRADDFEHMADL 339


>gi|116053144|ref|YP_793465.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122256841|sp|Q02F21|HLDE_PSEAB RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|115588365|gb|ABJ14380.1| lipopolysaccharide biosynthesis protein RfaE [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   + V        ++ +      
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGV----NDDASVTRLKGVGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +++V         ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVV------SFAEDTPERLLEQV-----RPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G ++        +  + YG     +  + N+     S++ I   + + 
Sbjct: 435 GVEQVVGA----QIVKAYGGEVRVLGLVENS-----STTAIVEKIRQK 473


>gi|15600189|ref|NP_253683.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas aeruginosa PAO1]
 gi|107104096|ref|ZP_01368014.1| hypothetical protein PaerPA_01005169 [Pseudomonas aeruginosa PACS2]
 gi|254238292|ref|ZP_04931615.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa C3719]
 gi|254244118|ref|ZP_04937440.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa 2192]
 gi|313110029|ref|ZP_07795933.1| lipopolysaccharide biosynthesis protein RfaE [Pseudomonas
           aeruginosa 39016]
 gi|54036086|sp|Q9HUG9|HLDE_PSEAE RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|9951281|gb|AAG08381.1|AE004912_7 LPS biosynthesis protein RfaE [Pseudomonas aeruginosa PAO1]
 gi|126170223|gb|EAZ55734.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa C3719]
 gi|126197496|gb|EAZ61559.1| LPS biosynthesis protein RfaE [Pseudomonas aeruginosa 2192]
 gi|310882435|gb|EFQ41029.1| lipopolysaccharide biosynthesis protein RfaE [Pseudomonas
           aeruginosa 39016]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA    +   + V        ++ +      
Sbjct: 332 EDARAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGV----NDDASVTRLKGVGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    ++        A  + E+ +++V         ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVV------SFAEDTPERLLEQV-----RPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           G ++        +  + YG     +  + N+     S++ I   + + 
Sbjct: 435 GVEQVVGA----QIVKAYGGEVRVLGLVENS-----STTAIVEKIRQK 473


>gi|221638155|ref|YP_002524417.1| pantoate--beta-alanine ligase [Rhodobacter sphaeroides KD131]
 gi|254778233|sp|B9KLD3|PANC_RHOSK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|221158936|gb|ACL99915.1| Pantothenate synthetase [Rhodobacter sphaeroides KD131]
          Length = 279

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
          G V  +G    +H GH  +  +A    +     +++   +PR     +         +  
Sbjct: 26 GVVPTMG---ALHEGHLSLARRARASCDR---VIVTIFVNPRQFNNPADLEKYPRTEAQD 79

Query: 79 EKILEKMGFSALI 91
            +L  +G  A+ 
Sbjct: 80 AALLASVGVDAVF 92


>gi|58039486|ref|YP_191450.1| bifunctional protein RfaE (involved in
           ADP-L-glycero-D-manno-heptose synthesis) [Gluconobacter
           oxydans 621H]
 gi|81352104|sp|Q5FS52|HLDE_GLUOX RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|58001900|gb|AAW60794.1| Bifunctional protein RfaE (involved in
           ADP-L-glycero-D-manno-heptose synthesis) [Gluconobacter
           oxydans 621H]
          Length = 479

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 27/155 (17%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           H    V   G FD +H GH  +L+ A +  +   + + + +     +   + P+      
Sbjct: 341 HGAKVVFTNGCFDLVHPGHVSLLQAAAREGDRLVVALNT-DRSVSRLKGPTRPVQK---E 396

Query: 76  SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             + +++  +     ++   F  +    +  + I+      L+   ++ G  +   +   
Sbjct: 397 EARARVIGALRSVDLVVL--FDED----TPLEVIR-----TLKPDILVKGADYTEDQVVG 445

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
            D        + YG   V +D +        S++ 
Sbjct: 446 ADV------VKSYGGKVVLVDLVEGQ-----STTR 469


>gi|298383974|ref|ZP_06993535.1| pantoate--beta-alanine ligase [Bacteroides sp. 1_1_14]
 gi|298263578|gb|EFI06441.1| pantoate--beta-alanine ligase [Bacteroides sp. 1_1_14]
          Length = 282

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 33/204 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V H I+  Q+    L+      G V  +G    +H GH  ++++++       +TV+S
Sbjct: 1   MKVIHTIKDLQAELTALRAQGKKVGLVPTMG---ALHAGHASLVKRSVSEN---GVTVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +             ++LE  G           +     T E + Y+   
Sbjct: 55  VFVNPTQFNDKNDLAKYPRTLDADCRLLEDCGAAFAFAPSVEEMYPQPDTREFS-YAPLD 113

Query: 107 FIQKVL---VEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
            + +       +  V  ++             FG+       I+++   +  +    +  
Sbjct: 114 TVMEGAFRPGHFNGVCQIVSKLFDAVQPDRAYFGEKDFQQLAIIREMVRQMDYKLEIVGC 173

Query: 155 DELRNNKSQIVSSSNIRTALTKGH 178
             +R      +SS N R +  +  
Sbjct: 174 PIVREEDGLALSSRNKRLSAQERE 197


>gi|308182194|ref|YP_003926321.1| pantoate--beta-alanine ligase [Helicobacter pylori PeCan4]
 gi|308064379|gb|ADO06271.1| pantoate--beta-alanine ligase [Helicobacter pylori PeCan4]
          Length = 276

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRALETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +P     +        P      + E++G +A+     T E   Y  EQ ++    ++L
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCERLGANAVFV-PKTSEMYPYETEQRLKLYAPKFL 112


>gi|71891854|ref|YP_277583.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|119365062|sp|Q493X3|HLDE_BLOPB RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|71795960|gb|AAZ40711.1| ADP-heptose synthase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 477

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 25/166 (15%)

Query: 13  LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
           + N  +  V+  G FD +H GH   L  A K+ +   + V S +   R +   + P   +
Sbjct: 337 VRNRGEKIVMTNGVFDILHSGHVSYLTNAKKLGDRLIVAVNS-DGSTRRLKGKTRP---I 392

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +    +  IL  +     +   F  +    +  + +  +  ++L     + G  +    D
Sbjct: 393 NTLEQRMFILAALTVVDWVV-PFYED----TPSRLVAYLSPDFL-----VKGGDYHV-CD 441

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             G +G+L       G     +     N     SSSNI  A+ + +
Sbjct: 442 IEGSQGVL-----NRGGTVRVL-----NFQTGCSSSNIINAIKRKN 477


>gi|29375751|ref|NP_814905.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           V583]
 gi|255976146|ref|ZP_05426732.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T2]
 gi|256618759|ref|ZP_05475605.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 4200]
 gi|256965424|ref|ZP_05569595.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HIP11704]
 gi|257086529|ref|ZP_05580890.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           D6]
 gi|257089586|ref|ZP_05583947.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           CH188]
 gi|257415793|ref|ZP_05592787.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           AR01/DG]
 gi|29343212|gb|AAO80975.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           V583]
 gi|255969018|gb|EET99640.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T2]
 gi|256598286|gb|EEU17462.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 4200]
 gi|256955920|gb|EEU72552.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HIP11704]
 gi|256994559|gb|EEU81861.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           D6]
 gi|256998398|gb|EEU84918.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           CH188]
 gi|257157621|gb|EEU87581.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ARO1/DG]
 gi|295112741|emb|CBL31378.1| Glycerol-3-phosphate cytidylyltransferase [Enterococcus sp. 7L76]
          Length = 132

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A +  +   + + +                +      +++
Sbjct: 4   ILTYGTFDLLHYGHINLLKKAKQQGDYLIVGLST------DAFNLEKKKQSYFSYEKRKQ 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q +  +     ++ T++ G  +       G    
Sbjct: 58  LLEAIRYVDLVIP--------ETSWKQKVSDIA--EFKIDTLVMGDDW------QGAFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTAL 174
           L               ++    ++  VS++ I+  L
Sbjct: 102 L---------EVETTAKVLYLPRTPEVSTTQIKKEL 128


>gi|188493022|ref|ZP_03000292.1| riboflavin kinase (Flavokinase) [Escherichia coli 53638]
 gi|188488221|gb|EDU63324.1| riboflavin kinase (Flavokinase) [Escherichia coli 53638]
          Length = 131

 Score = 37.8 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
            V+  G FD  H+GH  +L++A  +     + V
Sbjct: 2  KTVITFGTFDVFHVGHLRLLQRARALGERLLVGV 35


>gi|288932359|ref|YP_003436419.1| cytidyltransferase-related domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894607|gb|ADC66144.1| cytidyltransferase-related domain protein [Ferroglobus placidus DSM
           10642]
          Length = 148

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 34/157 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G F+ +H GH  +L+ A+K+        ++ +   R  I+S  P F +   ++++ I  K
Sbjct: 7   GTFEPLHEGHKKLLDVAVKLGGKEMTIGITSDEMARQRIRSVLP-FEIRAENVRQYIKRK 65

Query: 85  MGFSALIR---------YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            GF  +I           +   E    S E +    + + +  K    G           
Sbjct: 66  YGFEPMIVKITNPYGKTLEVDFEYLVVSPETYE---MAKKINEKRRELG----------- 111

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                     K     V +D +     + +S++ I+ 
Sbjct: 112 ----------KKEIKIVKVDFVLAEDGKPISATRIKR 138


>gi|124516601|gb|EAY58109.1| Cytidylyltransferase family protein [Leptospirillum rubarum]
          Length = 179

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H +E  + + +  +  V   G FD +H GH  +LE+A +  +   + + +     R++  
Sbjct: 21  HLVERLKEIRSSGQSIVFTNGCFDLVHAGHIEVLEKARQAGDFLIVALNTD----RSVKG 76

Query: 65  SSSPIFTLSPPSIQEKILEKMG-FSAL 90
              P   L     + +++  +    A+
Sbjct: 77  LKGPNRPLVTEYRRARVIGALACVDAV 103


>gi|27380533|ref|NP_772062.1| hypothetical protein blr5422 [Bradyrhizobium japonicum USDA 110]
 gi|27353697|dbj|BAC50687.1| blr5422 [Bradyrhizobium japonicum USDA 110]
          Length = 521

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 35/83 (42%), Gaps = 17/83 (20%)

Query: 15  NHLKGGVVAI--GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI----IQSSSP 68
              +G  VA+  G FD +HLGH   +   +   N + + +++       +      +  P
Sbjct: 32  AQAEGRTVALCHGVFDLVHLGH---VRHILAARNEADVVIVT-------VTADRFVNKGP 81

Query: 69  IFTLSPPSIQEKILEKMG-FSAL 90
              + P +++ ++L  +G    +
Sbjct: 82  GRPIFPENMRAEMLAALGTVDWV 104


>gi|94468668|gb|ABF18183.1| possible dephospho-CoA kinase [Aedes aegypti]
          Length = 507

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH ++L QA  +A +  +  ++        I+S      + P   + + +  
Sbjct: 144 GTFDRIHAGHKVLLSQAALLAEDRLVVGVTDENM----IKSKKLWELIMPTERRIEDVRA 199

Query: 85  M--GFSALIRYK 94
                   +RY+
Sbjct: 200 FLEDVDRTLRYE 211


>gi|319940629|ref|ZP_08014972.1| hypothetical protein HMPREF9464_00191 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805995|gb|EFW02753.1| hypothetical protein HMPREF9464_00191 [Sutterella wadsworthensis
           3_1_45B]
          Length = 343

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 36/175 (20%)

Query: 32  LGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSA 89
           LGH  ++E A + A    + V+       ++           P  ++  ++         
Sbjct: 158 LGHKALIELAARDAEQCIVFVVE-ENQ--SVF----------PFDVRLALVRAGTADLPN 204

Query: 90  LIRYK--------------FTLETANYSAEQFIQ-----KVLVEWLEVKTVITGTKFRFG 130
           +                  F  +     A+  +       +L     +     GT+    
Sbjct: 205 VRVVPSGPYIISAGTFPSYFLKKNERLPAQTHLDGTIFAHLLAPGFGITKRFVGTEPTDP 264

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             RA +   L+   +KY    V +  + +     +S+S +R A T G +      
Sbjct: 265 VTRAYN-EALKDVFKKYALELVEVPRIEDGVG-AISASRVRAAWTAGRMDEVEEW 317


>gi|306832932|ref|ZP_07466064.1| pantetheine-phosphate adenylyltransferase [Streptococcus bovis ATCC
           700338]
 gi|304424831|gb|EFM27965.1| pantetheine-phosphate adenylyltransferase [Streptococcus bovis ATCC
           700338]
          Length = 165

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+ +A K+ +   + +                 F       + ++LE+
Sbjct: 9   GSFDPVTNGHLDIIARASKLLDTLFVGI---------FYNKDKNGFF--SVEERRQMLEE 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                    +F       +A   +   + + LEV  ++ G   R GKD   +   L    
Sbjct: 58  A------LQEF-PNVKVITARDSLVVDIAKRLEVGYLVRG--LRNGKDLEYE-ADLAFYN 107

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                    +  L +     VSSS IR  +
Sbjct: 108 HYLASEIESVFLLSSPDLVHVSSSRIRELI 137


>gi|260598530|ref|YP_003211101.1| glycerol-3-phosphate cytidylyltransferase [Cronobacter turicensis
           z3032]
 gi|260217707|emb|CBA32079.1| Glycerol-3-phosphate cytidylyltransferase [Cronobacter turicensis
           z3032]
          Length = 131

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           ++  G FD  H+GH  ILE+A    ++  + V    L+F         S    + +    
Sbjct: 4   IITFGTFDVFHVGHVNILERAASFGDHLIVGVSSDKLNF---------SKKGRYPIYNQE 54

Query: 77  IQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
            + +I+  +     +  + +LE          +K  ++  +  T++ G  +    D   D
Sbjct: 55  DRCRIINSLRVVNEVFIEESLEL---------KKEYIKHYKADTLVMGDDWAGRFDWVND 105

Query: 137 RGILQKRGEKYGFHTVFIDELR 158
              +          T  I E+ 
Sbjct: 106 ICDVIYLPRTPSVSTTEIIEVV 127


>gi|167627561|ref|YP_001678061.1| pantoate--beta-alanine ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189036422|sp|B0TXZ9|PANC_FRAP2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|167597562|gb|ABZ87560.1| Pantoate--beta-alanine ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 261

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 43/216 (19%)

Query: 1   MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M +  NIE    L          G V  +G    +H GH  ++++A    +   +T++S 
Sbjct: 1   MIIAKNIEQFNLLRESFTKDRKIGFVPTMG---ALHNGHICLIKKAKSEND---VTIVSI 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P      +      +      +ILE +    L    F     +   +  + ++  E 
Sbjct: 55  FVNPTQFNNPNDYQTYPNQLQQDIQILESLDVDIL----FNPSEKDIYPDGNLLRIQPE- 109

Query: 116 LEVKTVITG-----------------------TKFRFGKDRAGDRGILQKRGEKYGF--H 150
           LE+  ++ G                            G+       ++++  + +     
Sbjct: 110 LEIANILEGKARPGHFSGMLTVVLKLLQITKPDNLYLGEKDYQQVMLIKQLVKDFFIKTK 169

Query: 151 TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
            +     R      +SS N    LT   +  A  + 
Sbjct: 170 VIVCSTQRQATGLPLSSRN--KNLTSADIEIANKVY 203


>gi|238791214|ref|ZP_04634853.1| Pantothenate synthetase [Yersinia intermedia ATCC 29909]
 gi|238729347|gb|EEQ20862.1| Pantothenate synthetase [Yersinia intermedia ATCC 29909]
          Length = 284

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 23 AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           +GN   +H GH  ++E A   A+   + V+S   +P    +    +          + L
Sbjct: 29 TMGN---LHEGHMTLVEDAKARAD---VVVVSIFVNPLQFERPDDLVRYPRTLQEDCEKL 82

Query: 83 EKMGFSALI 91
           + G   + 
Sbjct: 83 TRHGVDLVF 91


>gi|295835472|ref|ZP_06822405.1| cytidyltransferase [Streptomyces sp. SPB74]
 gi|197696435|gb|EDY43368.1| cytidyltransferase [Streptomyces sp. SPB74]
          Length = 157

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 24/151 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S       +++ +     + P   + +I+  
Sbjct: 14  GAYDLFHIGHLNILRHARSRCDYLVAGVVS-----DEMVERAKGRRPMIPLVERLEIVRS 68

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +              ++      V +     +  G  +R         G  +   
Sbjct: 69  --VKYV-----DAAFVETVPDKVETWKQVRF---DVLFKGDDWR---------GTPKGDR 109

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +  F  V +D +    +   SS+ +R AL 
Sbjct: 110 LESDFAAVGVDIVYFPYTVHTSSTQLRRALD 140


>gi|157368913|ref|YP_001476902.1| nicotinamide-nucleotide adenylyltransferase [Serratia
           proteamaculans 568]
 gi|157320677|gb|ABV39774.1| transcriptional regulator, XRE family [Serratia proteamaculans 568]
          Length = 419

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F  +        +      +  +LE K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEQGIEPYPHGWNVWSDGVKAFLEQKAIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E  G  TV ID  R+     +S   IR 
Sbjct: 176 Y------SSEAQDAPRYREHLGIETVLIDPERSF--MNISGRQIRQ 213


>gi|57504879|ref|ZP_00370854.1| sulfate adenylyltransferase, putative [Campylobacter coli RM2228]
 gi|57019307|gb|EAL56009.1| sulfate adenylyltransferase, putative [Campylobacter coli RM2228]
          Length = 386

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 62/178 (34%), Gaps = 30/178 (16%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTII 63
           FH  +  ++L  H    +V+  +FD +H  H  I    I  A+   + V         + 
Sbjct: 139 FH--KTKENLNAHKITAIVS--SFDPLHRAHERIFRWTIDKAD---LVV---------VF 182

Query: 64  QSSSPIFTLSPPSIQEKILEK-----MGFSALIRYK---FTLETANYSAEQFIQKVLVEW 115
              S         +++  L+K     +    +  +      L  A+ +    ++ +L + 
Sbjct: 183 LVESFDANGFDFDLKQNYLKKFIQNYLPPDRIFIFPLKDINLFHAHLNP--SLESILAKS 240

Query: 116 LEVKTVITGTKFR---FGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
           L    ++ G          D    + IL    + Y    + + E +  +  +++ S+ 
Sbjct: 241 LGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYDIEVIVLPEFVFCDACRMIVSTR 298


>gi|313113536|ref|ZP_07799125.1| pantetheine-phosphate adenylyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624263|gb|EFQ07629.1| pantetheine-phosphate adenylyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 185

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 20/99 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+++A KI ++  + VL           ++S    L     + ++L++
Sbjct: 25  GSFDPVTKGHLDIIKRAAKINDHLIVAVL-----------NNSAKNPLFTVEERVELLKE 73

Query: 85  M--GFSALIRYKF---TLETANYSAEQFIQKVLVEWLEV 118
              G   +    F   T+E A          V+V  L  
Sbjct: 74  CCKGIQNVSVESFDGLTVEFAKK----RHASVMVRGLRA 108


>gi|315501261|ref|YP_004080148.1| rfae bifunctional protein [Micromonospora sp. L5]
 gi|315407880|gb|ADU05997.1| rfaE bifunctional protein [Micromonospora sp. L5]
          Length = 612

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  + +   I  ++ +   R +     P+   +P   
Sbjct: 462 RSVVFTNGCFDVLHPGHVRYLTQARALGD-LLIVAVNSDGSVRRLKGPDRPV---NPVED 517

Query: 78  QEKILEKMG-FSALIRYKFT 96
           +  +L  +     ++ ++  
Sbjct: 518 RIALLAALACVDHVVVFEED 537


>gi|302864978|ref|YP_003833615.1| rfaE bifunctional protein [Micromonospora aurantiaca ATCC 27029]
 gi|302567837|gb|ADL44039.1| rfaE bifunctional protein [Micromonospora aurantiaca ATCC 27029]
          Length = 612

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  + +   I  ++ +   R +     P+   +P   
Sbjct: 462 RSVVFTNGCFDVLHPGHVRYLTQARALGD-LLIVAVNSDGSVRRLKGPDRPV---NPVED 517

Query: 78  QEKILEKMG-FSALIRYKFT 96
           +  +L  +     ++ ++  
Sbjct: 518 RIALLAALACVDHVVVFEED 537


>gi|224825654|ref|ZP_03698758.1| pantoate/beta-alanine ligase [Lutiella nitroferrum 2002]
 gi|224601878|gb|EEG08057.1| pantoate/beta-alanine ligase [Lutiella nitroferrum 2002]
          Length = 277

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 69/228 (30%), Gaps = 30/228 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M V  NI   ++             +GN   +H GH  ++++A + A+     V+S   +
Sbjct: 1   MEVIRNIAELRAWRRQAGKVAFVPTMGN---LHEGHLALVKEARQRADK---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G   L           IR  F +E  +   E  
Sbjct: 55  RLQFGQGEDFDAYPRTFDADSAKLRDAGVDVLFFPIEQELYPRIRQDFNVEPPHIQNELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELR 158
                  +  V TV+             FGK       +++   +        V +D  R
Sbjct: 115 GAFRPGHFRGVATVVTKLFNIVQPDLACFGKKDYQQLHVIKAMVDDLNQPVEVVPVDTGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                 +SS N    L+      A  L  +   I   ++ GE+   +L
Sbjct: 175 AEDGLALSSRN--GYLSAEERAEAPRLYRHLAAIRDRLLAGEQDYASL 220


>gi|220904659|ref|YP_002479971.1| rfaE bifunctional protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868958|gb|ACL49293.1| rfaE bifunctional protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 488

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 39/162 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI--- 77
           V   G FD +H GH  +L Q+     +  +            + S + +  L  PS    
Sbjct: 350 VFTNGCFDLLHPGHISLLRQSAAQGTHLVVG-----------LNSDASVRRLKGPSRPVQ 398

Query: 78  ----QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR---- 128
               +  +L  + G  A++   F  +             LV  L    ++ G+ +     
Sbjct: 399 NEQSRALLLSALHGVDAVVF--FDED---------TPLNLVTALRPDVLVKGSDYTVETV 447

Query: 129 FGKD---RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSS 167
            G D    +G R  L    +  G  T  I    +      SS
Sbjct: 448 VGADVVLASGGRVYLADLVQ--GCSTTGIVRKIDASGGNSSS 487


>gi|72163283|ref|YP_290940.1| pantothenate synthetase [Thermobifida fusca YX]
 gi|123628629|sp|Q47KV5|PANC_THEFY RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|71917015|gb|AAZ56917.1| pantothenate synthetase [Thermobifida fusca YX]
          Length = 296

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 8/91 (8%)

Query: 3  VFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
          V    E  Q+L   L    +   +G    +H GH  ++ QA + A       +S   +P 
Sbjct: 14 VTRTAEEIQALRPQLGRLALVPTMG---ALHTGHRSLIAQAREHAE---SVAVSIFVNPL 67

Query: 61 TIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
              +              ++  + G   + 
Sbjct: 68 QFGPNEDYDRYPRTFDHDLRVCAEEGVDVVF 98


>gi|197286352|ref|YP_002152224.1| nicotinamide-nucleotide adenylyltransferase [Proteus mirabilis
           HI4320]
 gi|194683839|emb|CAR44950.1| transcriptional regulator [Proteus mirabilis HI4320]
          Length = 414

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 16/178 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M   H   +    P   K   V  G F  +H GH  ++++A    +   + +    P  +
Sbjct: 48  MSALHQF-LGLEYPLQQKTIGVIFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDK 106

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQFIQKVLVEWLE 117
            +   +S +      S + + L +  F     +  ++F         +    ++  E ++
Sbjct: 107 ELFI-NSAMSQQPTVSDRLRWLLQT-FKYQKNIRIHEFNEH--GIEPQPHGWEMWSEGIK 162

Query: 118 V--KTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              +       F +  +R        +     G  TV +D  R+     +S S IR A
Sbjct: 163 AFLQEKQIAPDFIYTSER----EDASQYEAFLGIETVLVDPERSF--MNISGSQIRQA 214


>gi|42519509|ref|NP_965439.1| hypothetical protein LJ1633 [Lactobacillus johnsonii NCC 533]
 gi|73921044|sp|Q74ID3|Y1633_LACJO RecName: Full=UPF0348 protein LJ_1633
 gi|41583797|gb|AAS09405.1| hypothetical protein LJ_1633 [Lactobacillus johnsonii NCC 533]
          Length = 385

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 30  IHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH  ++ QA   A N PI  V+S        +Q       +     + K     G  
Sbjct: 13  FHSGHEFLMNQARLAAKNDPIIVVMS-----GNYVQRGQ--MAIMDKWQRAKAALASGAD 65

Query: 89  ALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
            +    F    A   A+ F      ++  L V  +  G
Sbjct: 66  LVFELPF--SFAVQPADIFANGSIKMLSDLGVSELFFG 101


>gi|225867901|ref|YP_002743849.1| hypothetical protein SZO_02910 [Streptococcus equi subsp.
           zooepidemicus]
 gi|259646920|sp|C0MG35|Y291_STRS7 RecName: Full=UPF0348 protein SZO_02910
 gi|225701177|emb|CAW98082.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 366

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA        I  +S        +Q   P   L    ++ ++  + G
Sbjct: 10  FNPFHYGHQYLLSQA----RGLKIVAMS-----GNFVQRGEPA--LVDKWVRAQMALENG 58

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              ++   F +    A+Y A+  +  ++   L + T+  GT+  F   +
Sbjct: 59  ADLVVELPFLVSVQSADYFAQGAVDILM--RLGIDTLAFGTEQLFDYQK 105


>gi|195978781|ref|YP_002124025.1| hypothetical protein Sez_1683 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|226736411|sp|B4U4U5|Y1683_STREM RecName: Full=UPF0348 protein Sez_1683
 gi|195975486|gb|ACG63012.1| hypothetical protein Sez_1683 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 366

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA        I  +S        +Q   P   L    ++ ++  + G
Sbjct: 10  FNPFHYGHQYLLSQA----KGLKIVAMS-----GNFVQRGEPA--LVDKWVRAQMALENG 58

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
              ++   F +    A+Y A+  +  ++   L + T+  GT+  F   +
Sbjct: 59  ADLVVELPFLVSVQSADYFAQGAVDILM--RLGIDTLAFGTEQLFDYQK 105


>gi|42524647|ref|NP_970027.1| ADP-heptose synthase [Bdellovibrio bacteriovorus HD100]
 gi|39576857|emb|CAE78086.1| ADP-heptose synthase [Bdellovibrio bacteriovorus HD100]
          Length = 155

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 24/119 (20%)

Query: 6   NIEIN-QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           NIE     L    K  V   G FD +H+GH   L++A K+ +   + V            
Sbjct: 9   NIETTLAPLRAAGKKIVFTNGCFDLLHVGHVRYLQEAQKLGDLLVVGV-----------N 57

Query: 65  SSSPIFTL---SPP----SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           S + +  L   + P    + + +IL  +         FT+     + E  I KV  + L
Sbjct: 58  SDASVKRLKGPTRPVQIEADRAEILAALNA-----VDFTVIFTEDTPENLIHKVRPDIL 111


>gi|291005685|ref|ZP_06563658.1| glycerol-3-phosphate cytidyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 152

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 26/151 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL QA +  ++    V++       ++++      + P   + +I+  
Sbjct: 11  GAYDMFHIGHLNILRQASQECDHLVAGVVTD----SVVLRAKGKKPVI-PFEERLEIVRN 65

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +              A    ++++ K  + + L    +  G  +R G  RA     L+ +
Sbjct: 66  I-----------RCVAEAVPDRYLDKFRMWKQLRYDVLFKGDDWR-GTSRA---QELESK 110

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               G    +        +   SS+ +R  L
Sbjct: 111 LSAVGARVRYFP-----YTMHTSSTLLRRRL 136


>gi|255027527|ref|ZP_05299513.1| hypothetical protein LmonocytFSL_16375 [Listeria monocytogenes FSL
           J2-003]
          Length = 130

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-IVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E   ++    +E   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PENNWEQKRDDIEKYGIDVFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L+          V++      +++ +S+S I+  L
Sbjct: 100 DFLKDVC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|123441075|ref|YP_001005064.1| pantoate--beta-alanine ligase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|158706050|sp|A1JJN7|PANC_YERE8 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|122088036|emb|CAL10824.1| pantoate--beta-alanine ligase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 284

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 39/225 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDAKTRAD---VVVVSIFVNPLQFERPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALI------RYKFTLETANYSAEQFIQKVLVEWL-----------EVKTVI--- 122
            + G   +        Y      A   A+ ++    +  +            V T++   
Sbjct: 83  TRHGVDLVFAPAAADVYP-----AGLEAQTYVDVPALSTILEGASRPGHFRGVSTIVSKL 137

Query: 123 ---TGTK-FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTK 176
                     FG+       +++K     G+    V +  +R      +SS N    L+ 
Sbjct: 138 FNLVQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSSRN--GYLSA 195

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
                A  L      +   +  GE+    L   TA          
Sbjct: 196 QERKIAPQLYKIMQALAEKLALGERQIDDLLADTAEQLRDAGFTP 240


>gi|16803129|ref|NP_464614.1| hypothetical protein lmo1089 [Listeria monocytogenes EGD-e]
 gi|47094947|ref|ZP_00232560.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           str. 1/2a F6854]
 gi|224500523|ref|ZP_03668872.1| hypothetical protein LmonF1_12981 [Listeria monocytogenes Finland
           1988]
 gi|224502597|ref|ZP_03670904.1| hypothetical protein LmonFR_08759 [Listeria monocytogenes FSL
           R2-561]
 gi|254828467|ref|ZP_05233154.1| tagD [Listeria monocytogenes FSL N3-165]
 gi|254830141|ref|ZP_05234796.1| hypothetical protein Lmon1_02230 [Listeria monocytogenes 10403S]
 gi|254898737|ref|ZP_05258661.1| hypothetical protein LmonJ_02940 [Listeria monocytogenes J0161]
 gi|254911774|ref|ZP_05261786.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           J2818]
 gi|254936100|ref|ZP_05267797.1| tagD [Listeria monocytogenes F6900]
 gi|284801421|ref|YP_003413286.1| hypothetical protein LM5578_1172 [Listeria monocytogenes 08-5578]
 gi|284994563|ref|YP_003416331.1| hypothetical protein LM5923_1126 [Listeria monocytogenes 08-5923]
 gi|16410491|emb|CAC99167.1| tagD [Listeria monocytogenes EGD-e]
 gi|47016565|gb|EAL07485.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258600863|gb|EEW14188.1| tagD [Listeria monocytogenes FSL N3-165]
 gi|258608690|gb|EEW21298.1| tagD [Listeria monocytogenes F6900]
 gi|284056983|gb|ADB67924.1| hypothetical protein LM5578_1172 [Listeria monocytogenes 08-5578]
 gi|284060030|gb|ADB70969.1| hypothetical protein LM5923_1126 [Listeria monocytogenes 08-5923]
 gi|293589726|gb|EFF98060.1| glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes
           J2818]
          Length = 127

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 37/157 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHIHLLKRAKALGDYL-IVAISSDE-----FNRIKHKEAYHSYEHRKL 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVL--VEWLEVKTVITGTKFRFGKDRAGDR 137
           I+E +     +I             E   ++    +E   +   + G  +       G+ 
Sbjct: 58  IIEAIRYVDEVI------------PENNWEQKRDDIEKYGIDVFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             L+          V++      +++ +S+S I+  L
Sbjct: 100 DFLKDVC-----EVVYLP-----RTEGISTSQIKDEL 126


>gi|320101458|ref|YP_004177050.1| cytidyltransferase-like domain-containing protein [Desulfurococcus
           mucosus DSM 2162]
 gi|319753810|gb|ADV65568.1| cytidyltransferase-related domain protein [Desulfurococcus mucosus
           DSM 2162]
          Length = 177

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 33/159 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITV------LSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G F   H GH  ++E+ ++  +   + +       +     R    +   I  L+     
Sbjct: 8   GRFQPFHRGHLAVVERLLEEFDEIVVVIGSAQEGFTC----RNPFTAGERIEMLTRLFRD 63

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           E +     F  +                +   VL     V  V            +G+  
Sbjct: 64  EHV-----FDRVWLIPVPDIYM---PMAWTTHVLSLTPRVNAV-----------ASGNPH 104

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +L +  +  GF TV I+ +  +K    S + IR  + +G
Sbjct: 105 VL-ELFKWVGFKTVRIEPVEPDKY---SGTRIRQLIVEG 139


>gi|134099723|ref|YP_001105384.1| glycerol-3-phosphate cytidyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133912346|emb|CAM02459.1| probable glycerol-3-phosphate cytidyltransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 150

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 26/151 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL QA +  ++    V++       ++++      + P   + +I+  
Sbjct: 9   GAYDMFHIGHLNILRQASQECDHLVAGVVTD----SVVLRAKGKKPVI-PFEERLEIVRN 63

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +              A    ++++ K  + + L    +  G  +R G  RA     L+ +
Sbjct: 64  I-----------RCVAEAVPDRYLDKFRMWKQLRYDVLFKGDDWR-GTSRA---QELESK 108

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               G    +        +   SS+ +R  L
Sbjct: 109 LSAVGARVRYFP-----YTMHTSSTLLRRRL 134


>gi|288959346|ref|YP_003449687.1| ADP-heptose synthase [Azospirillum sp. B510]
 gi|288911654|dbj|BAI73143.1| ADP-heptose synthase [Azospirillum sp. B510]
          Length = 481

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 28/111 (25%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI------- 77
           G FD +H GH  +L+QA    +   + V+         + S + +  L   S        
Sbjct: 355 GCFDLLHPGHISLLKQARAACD---VLVVG--------LNSDASVKRLKGESRPVQNETA 403

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  +L  +G   L+           + E  I+      L    ++ G  + 
Sbjct: 404 RATVLASLGCVDLVVI-----FGEDTPETLIRV-----LRPDVLVKGADYT 444


>gi|254166842|ref|ZP_04873696.1| Cytidylyltransferase, putative [Aciduliprofundum boonei T469]
 gi|289596422|ref|YP_003483118.1| cytidyltransferase-related domain protein [Aciduliprofundum boonei
           T469]
 gi|327488391|sp|B5I9H4|RIBL_ACIB4 RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|197624452|gb|EDY37013.1| Cytidylyltransferase, putative [Aciduliprofundum boonei T469]
 gi|289534209|gb|ADD08556.1| cytidyltransferase-related domain protein [Aciduliprofundum boonei
           T469]
          Length = 149

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 34/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-----SPP 75
           V+A G FD +H GH L L +A K+ +   + V              S +  L        
Sbjct: 4   VMATGVFDILHPGHVLFLREARKLGDELVVVV-----------ARDSTVERLKHKPIMNE 52

Query: 76  SIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
            I+  ++E +      +                     VE +    ++ G   +F     
Sbjct: 53  DIRRFMVESLKPVDRAVLGHKDDMYK-----------TVEDVRPDIIVLGYDQKF----- 96

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI 170
            D   +++   K G     +   +   S +  +  I
Sbjct: 97  -DEKEIEEECRKRGIKVKVVRLKKYGDSDLNGTRKI 131


>gi|325183101|emb|CCA17558.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 310

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           G FD +H GH  +L  A+KI  N  I  ++
Sbjct: 171 GTFDHLHNGHKKLLSLAVKICKNHLIVGVT 200


>gi|119899594|ref|YP_934807.1| ADP-heptose synthase [Azoarcus sp. BH72]
 gi|119672007|emb|CAL95921.1| ADP-heptose synthase [Azoarcus sp. BH72]
          Length = 169

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  +     + + + +   R + +       ++P   
Sbjct: 34  RPLVFTNGCFDILHRGHVTYLAQARALGAAMVVALNT-DASVRRLGKGEDRP--MNPLED 90

Query: 78  QEKILEKMG-FSALIRYKFTLETANY 102
           +  ++  +G    +  +      A  
Sbjct: 91  RLAVMAALGCVDLVTWFDEDTPLARI 116


>gi|74318072|ref|YP_315812.1| pantoate--beta-alanine ligase [Thiobacillus denitrificans ATCC
           25259]
 gi|123611482|sp|Q3SH82|PANC_THIDA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|74057567|gb|AAZ98007.1| pantoate-beta-alanine ligase [Thiobacillus denitrificans ATCC
           25259]
          Length = 283

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 12/115 (10%)

Query: 1   MHVFHNI-EINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M V H + ++  +L    +   V  +GN   +H GH  ++E A +  +  P+    F   
Sbjct: 1   MQVVHTVADLRAALSEADRSAFVPTMGN---LHAGHVSLVELAKR--HGGPVVASIFVN- 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           P                +     L + G   +    F  +T+         +V V
Sbjct: 55  PLQFGAGEDFERYPRTLAADCDKLAEAGCDLV----FAPDTSALYPVAQTFRVDV 105


>gi|56417128|ref|YP_154202.1| pantoate-beta-alanine ligase [Anaplasma marginale str. St. Maries]
 gi|56388360|gb|AAV86947.1| pantoate-beta-alanine ligase [Anaplasma marginale str. St. Maries]
          Length = 299

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 64/218 (29%), Gaps = 45/218 (20%)

Query: 1   MHVFHNIE----INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M +  ++E    + +   N   G V  +G    +H GH   L    ++  ++ + ++S  
Sbjct: 23  MEIVRDVESVRAVLRPFTNRKIGLVPTMG---ALHSGH---LSLVHEMKKHADVVIVSIF 76

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRY-----------------KFTLET 99
            +P                 +  +     G   +                        E 
Sbjct: 77  VNPLQFSPGEDYEKYPRCEEVDCEKCASAGVDVVYIPSAEGMYPDGFSTSVDIGPMAREL 136

Query: 100 ANYSAEQFIQKVLVEWL------EVKTVITGT-KFRFGKDRAGDRGILQKRGEKYGFHTV 152
              S + FI  ++V  +          +I G   ++          + ++          
Sbjct: 137 CGASRQNFINGIMVVLIKLVMQTNAHCMILGEKDYQM-------LHLTRQLFRDLNIGVD 189

Query: 153 FID--ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            +    +R+ +   +SS +    L+   +  A  L G+
Sbjct: 190 VLQGNTVRSAEGLALSSRH--QYLSSAEITKANFLYGF 225


>gi|118462570|ref|YP_879831.1| pantoate--beta-alanine ligase [Mycobacterium avium 104]
 gi|158706022|sp|A0QA93|PANC_MYCA1 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|118163857|gb|ABK64754.1| pantoate--beta-alanine ligase [Mycobacterium avium 104]
          Length = 308

 Score = 37.5 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 45/180 (25%), Gaps = 31/180 (17%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++     + V+S   +P                     +L   G   
Sbjct: 42  LHDGHLALVRAAKRVP--GSVVVVSIFVNPLQFSAGEDLDAYPRTLDDDLALLRSEGVE- 98

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TVITGTKFR 128
                FT   A          V    L  +                      ++   +  
Sbjct: 99  ---IAFTPTAAAMYPNGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVCKLLQIVRPDRIF 155

Query: 129 FGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FG+       ++++           V +  +R      +SS N    L       A  L 
Sbjct: 156 FGEKDYQQLVMIRQMVADLNIDVQVVGVPTVREADGLAMSSRN--RYLDATQRELAVTLS 213


>gi|319949292|ref|ZP_08023371.1| bifunctional synthase/transferase [Dietzia cinnamea P4]
 gi|319437042|gb|EFV92083.1| bifunctional synthase/transferase [Dietzia cinnamea P4]
          Length = 147

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 43/159 (27%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V   G FD +H GH   L  A ++     + VL         + S + +  L       +
Sbjct: 15  VATGGCFDVLHAGHAQYLRAAREL--GDLLVVL---------LNSDASVRRLKGPGRPVN 63

Query: 74  PPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           P + +  +LE +    A++   F  +       + +     + L     + G  +R    
Sbjct: 64  PVADRRALLEALASVDAVVV--FDED----DPREAL-----DALRPDVWVKGGDYR---- 108

Query: 133 RAGDRGILQKRGEKYGFHT-VFIDELRNNKSQIVSSSNI 170
                  L +    +G+   V I  L + +    S+++I
Sbjct: 109 ----VADLPEAPLVHGWGGRVEILPLLSGR----STTSI 139


>gi|315611865|ref|ZP_07886784.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           ATCC 49296]
 gi|315316043|gb|EFU64076.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           ATCC 49296]
          Length = 162

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+E+A K+ +   + V  +NPH +  +          P   +++ +EK
Sbjct: 10  GSFDPMTNGHLDIIERASKLFDKLYVGVF-YNPHKQGFL----------PVENRKRAVEK 58

Query: 85  --MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                  +            S +Q +  V    L  KT++ G +                
Sbjct: 59  AVAHLDNVEVLA--------SHDQLVVDVA-RRLGAKTLVRGLRNTTDLQYESSFDY--- 106

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +       I      +   +SSS +R  L
Sbjct: 107 YNHQLAPEIETIYLYSRPEHLYISSSAVRELL 138


>gi|294635063|ref|ZP_06713579.1| pantoate--beta-alanine ligase [Edwardsiella tarda ATCC 23685]
 gi|291091561|gb|EFE24122.1| pantoate--beta-alanine ligase [Edwardsiella tarda ATCC 23685]
          Length = 286

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 37/213 (17%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +GN   +H GH  ++ +A   A+   + ++S   +P    +               + L 
Sbjct: 30  MGN---LHEGHMTLVREARARAD---VVIVSVFVNPMQFDRPDDLARYPRTLQEDCEKLN 83

Query: 84  KMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK----------------- 126
           + G   +    F         +   Q+  V+   + T++ G                   
Sbjct: 84  RNGVDLV----FAPAADEIYPQGVGQQTYVDVPALSTILEGESRPGHFRGVATIVSKLFN 139

Query: 127 ------FRFGKDRAGDRGILQKRGEK--YGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                   FG+       +++K      YG   V +  +R      +SS N    L    
Sbjct: 140 LVQPDLACFGEKDYQQLQLIRKLVADLGYGIEIVGVPIVRGEDGLALSSRN--GYLDSDE 197

Query: 179 VLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
              A  L      + + + +GE+    L   TA
Sbjct: 198 RRLAPRLYNIMMQLATQLENGERNLDELLEQTA 230


>gi|149927043|ref|ZP_01915301.1| Cytidyltransferase-related protein [Limnobacter sp. MED105]
 gi|149824264|gb|EDM83484.1| Cytidyltransferase-related protein [Limnobacter sp. MED105]
          Length = 164

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 2   HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            V H  E+ +         V   G FD +H GH   L+QA +   +  + V S     R 
Sbjct: 13  KVCHPSELAERAQQLKGPVVFTNGVFDLLHRGHVTYLDQAAQEGQSLIVAVNSDESVKRL 72

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRY 93
                 P   ++    +  +L  +   AL+ Y
Sbjct: 73  GKGPDRP---INTQVDRMHVLAALECVALVTY 101


>gi|294944497|ref|XP_002784285.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239897319|gb|EER16081.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 356

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 17/122 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH+  + QA    +   + +     H  ++I              + ++L+ 
Sbjct: 25  GCFDIMHSGHYNAIRQAKAQCDILVVGI-----HSDSVIADRKAPPV-MKQRERYELLKH 78

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     ++          Y A   +    +E       + G          G    L+  
Sbjct: 79  IKWVDEIL----------YDASYDVGLKTLEKARADFCVHGDDMPVDSSGKGVYDELRDA 128

Query: 144 GE 145
           G+
Sbjct: 129 GK 130


>gi|192362253|ref|YP_001981032.1| LPS biosynthesis protein RfaE [Cellvibrio japonicus Ueda107]
 gi|190688418|gb|ACE86096.1| LPS biosynthesis protein RfaE [Cellvibrio japonicus Ueda107]
          Length = 478

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 30/126 (23%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
             +  + +  V   G FD IH GH   LE+A K+ +   + V            S + + 
Sbjct: 333 ADVRANGEKIVFTNGCFDIIHAGHVGYLEEARKLGHRLVVAV-----------NSDASVK 381

Query: 71  TL-------SPPSIQEKILEKMGFSAL-IRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
            L       +    +  +L   G  A+     F  +    + E+ I     + L+   ++
Sbjct: 382 RLKGDGRPINTLDRRMAVLA--GLEAVDWVIGFDED----TPERLI-----DTLKPDILV 430

Query: 123 TGTKFR 128
            G  +R
Sbjct: 431 KGGDYR 436


>gi|324990697|gb|EGC22633.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK353]
          Length = 164

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 42/151 (27%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMSKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +       E A   A +   +  V  L            +  +       +    
Sbjct: 61  QHLDNVEVITSQNELAVTVARRLGTQAFVRGLRNS-----QDLDYEAN-------MNFFN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           ++       I  L     Q +SSS IR  + 
Sbjct: 109 QELAEELETIFLLSKPDYQHISSSRIRELIA 139


>gi|90406865|ref|ZP_01215057.1| pantoate--beta-alanine ligase [Psychromonas sp. CNPT3]
 gi|90312102|gb|EAS40195.1| pantoate--beta-alanine ligase [Psychromonas sp. CNPT3]
          Length = 282

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 35/226 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H+  + ++     K        +  +GN   +H GH  ++++  K+A+   ITV+S
Sbjct: 1   MKIIHDPMLLRNNIKQFKTTGQEIVFIPTMGN---LHDGHIALIKEGQKVAS---ITVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR------YKFTLETANYSAEQFI 108
              +P      +             K LE  G   +        Y   LET  Y     +
Sbjct: 55  IFVNPMQFNNQADLKNYPRTLEADYKKLEAAGVDIVFVPSAEVIYPHGLETQTYIEVPVL 114

Query: 109 QKVLVEWL------EVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYG--FHTVF 153
             VL   L       + T++             FG+       I+++  +  G   + + 
Sbjct: 115 SDVLEGKLRPGHFRGMSTIVTKLFNLVQPDHACFGEKDFQQLAIIKQMVKDMGMPINIIA 174

Query: 154 IDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHG 199
           +  +R      +SS N  + L    +  A  L      +  D+   
Sbjct: 175 VPIIRAENGLALSSRN--SKLNAEQMQIAPLLARVMQQLAGDITQQ 218


>gi|333025288|ref|ZP_08453352.1| putative pantoate-beta-alanine ligase [Streptomyces sp. Tu6071]
 gi|332745140|gb|EGJ75581.1| putative pantoate-beta-alanine ligase [Streptomyces sp. Tu6071]
          Length = 278

 Score = 37.5 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 52/177 (29%), Gaps = 22/177 (12%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++ +A  +A      V++   +P                     I    G   
Sbjct: 6   LHEGHASLVREARALAGPEGQVVVTVFVNPLQFGAGEDLDRYPRTLEADLDIAGSAGADH 65

Query: 90  LI------RYKFTLETANYSAEQFIQKVLV----EWLEVKTVITGTKFR--------FGK 131
           ++       Y         SA    +++         +    + G  F         FG+
Sbjct: 66  VLAPSVDEVYPGGAPEVRISAGPMGERLEGASRPGHFDGMLTVVGKMFHLVRPDLALFGQ 125

Query: 132 DRAGDRGILQKRGE--KYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
             A    ++++      +G   V +   R +     SS N    L++    +A  L 
Sbjct: 126 KDAQQLALVRRMVRDLAFGIEIVSVPTARESDGLARSSRN--RYLSEDERRSALALS 180


>gi|290968704|ref|ZP_06560242.1| pantetheine-phosphate adenylyltransferase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781357|gb|EFD93947.1| pantetheine-phosphate adenylyltransferase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 163

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 26/153 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I E+  K+ +   I V  F          +     L     +E++L +
Sbjct: 8   GSFDPVTNGHIDIFERGSKLVDKLIIAV--FE-------NPTKKP--LFTMKEREELLLE 56

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                  +    F     N  A      +++  L        + F +   RA     L  
Sbjct: 57  TTKHIHNVEVVSF-QGLLNEYAIAHGATIIIRGLRAL-----SDFEYEFQRA-----LLM 105

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           +  +    TVFI  + +     +SS+ IR    
Sbjct: 106 KKVEPKIETVFI--MTSTNYSYISSTGIRELAC 136


>gi|302870301|ref|YP_003838938.1| pantoate/beta-alanine ligase [Micromonospora aurantiaca ATCC 27029]
 gi|302573160|gb|ADL49362.1| pantoate/beta-alanine ligase [Micromonospora aurantiaca ATCC 27029]
          Length = 280

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 10/87 (11%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V+ +G    +H GH  +L  A + A +    +++   +P     +             
Sbjct: 23  GVVMTMG---ALHAGHEALLRAARERAGH---VIVTIFVNPLQFGPNEDFDRYPRTLDTD 76

Query: 79  EKILEKMGFSALIRYKFTLETANYSAE 105
            +I  + G   +    F         E
Sbjct: 77  LEICRRAGVDVV----FAPSVTEMYPE 99


>gi|158430500|pdb|2QYG|A Chain A, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
           Rhodopseudomonas Palustris
 gi|158430501|pdb|2QYG|B Chain B, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
           Rhodopseudomonas Palustris
 gi|158430502|pdb|2QYG|C Chain C, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
           Rhodopseudomonas Palustris
 gi|158430503|pdb|2QYG|D Chain D, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
           Rhodopseudomonas Palustris
          Length = 452

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 24/178 (13%)

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             +     I   F  E A     +    +  E    +    G    F    A     L  
Sbjct: 34  ADLDLDNYIELDFDFECAG-DPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSA 92

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
                GF       +       V +  +  A   G+        G +       + GE +
Sbjct: 93  EPRPSGFSV----PVECAARGPVHACRVTIAHPHGNF-------GAKIPNLLSAVCGEGV 141

Query: 203 GRTLGFPTANMQ----LSPDIL----LKEGVYAIRFRTQ--DQTSYSGVA--NFGRNP 248
             + G P   +Q      P +      + G+  +R R Q  D+  + GV   N G  P
Sbjct: 142 FFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPP 199


>gi|119356389|ref|YP_911033.1| pantothenate synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|158706005|sp|A1BDY2|PANC_CHLPD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|119353738|gb|ABL64609.1| pantothenate synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 283

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  +    Q++   L+      G V+ +G    +H GH  ++++A KI   +   +L+
Sbjct: 1   MQIITDPIQMQAIAEKLRLNRQLIGVVMTMG---ALHEGHLSLIKEARKI---AGTIILT 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETAN----------YSA 104
              +PR             P        +      +                        
Sbjct: 55  IFVNPRQFAPHEDFHRYPRPFEQDAAHAKAAEVDYVFAPPVDAMYTGNFQTTVHPGPLGE 114

Query: 105 EQFIQKVLVEWLEVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE- 156
           +   ++    +  V T++T            FG+  A    ++++  +        I+  
Sbjct: 115 QFEGKQRPGHFSGVATIVTKLLQITRPHIAVFGEKDAQQLAVIKQLVKDLNIDVRIIEAP 174

Query: 157 -LRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
            +R+     VSS NI   L+      A  L       E
Sbjct: 175 IIRDENGLAVSSRNI--YLSAKERDAATVLYKGLCHAE 210


>gi|257075855|ref|ZP_05570216.1| glycerol-3-phosphate cytidylyltransferase [Ferroplasma acidarmanus
           fer1]
          Length = 139

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 30/161 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV---LSFNPHPRTIIQSSSPIFTLSPPSI 77
           V+A G FD +HLGH   L ++    +   + +    +   H + ++ + +          
Sbjct: 4   VMASGVFDILHLGHVHYLRESKSFGDYLVVVIASDYTAQKHGKELVFNEN---------E 54

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  ++ ++     ++            AE          L+   +  G   +F      D
Sbjct: 55  RSALVSELKMVDEVMVGHSDDNIFKTVAE----------LKPDIITLGYDQKF------D 98

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
              ++   +K G +T  +         I SSS IR  + + 
Sbjct: 99  DSYIETECKKLGLNT-KVRRTSPYDGTINSSSKIRQKILES 138


>gi|39933339|ref|NP_945615.1| ribulose bisphosphate carboxylase-like protein [Rhodopseudomonas
           palustris CGA009]
 gi|81175001|sp|Q6ND47|RBLL2_RHOPA RecName: Full=Ribulose bisphosphate carboxylase-like protein 2;
           Short=RuBisCO-like protein
 gi|39652964|emb|CAE25706.1| ribulose bisphosphate carboxylase-like protein; rubisco-like
           protein [Rhodopseudomonas palustris CGA009]
          Length = 432

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 24/178 (13%)

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             +     I   F  E A     +    +  E    +    G    F    A     L  
Sbjct: 14  ADLDLDNYIELDFDFECAG-DPHEAAAHLCSEQSTAQWRRVGFDEDFRPRFAAKVLELSA 72

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
                GF       +       V +  +  A   G+        G +       + GE +
Sbjct: 73  EPRPSGFSV----PVECAARGPVHACRVTIAHPHGNF-------GAKIPNLLSAVCGEGV 121

Query: 203 GRTLGFPTANMQ----LSPDIL----LKEGVYAIRFRTQ--DQTSYSGVA--NFGRNP 248
             + G P   +Q      P +      + G+  +R R Q  D+  + GV   N G  P
Sbjct: 122 FFSPGIPLIRLQDIRFPEPYLAAFDGPRFGIAGVRERLQAFDRPIFFGVIKPNIGLPP 179


>gi|307327030|ref|ZP_07606220.1| pantoate/beta-alanine ligase [Streptomyces violaceusniger Tu 4113]
 gi|306887328|gb|EFN18324.1| pantoate/beta-alanine ligase [Streptomyces violaceusniger Tu 4113]
          Length = 323

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 3/71 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A        +  ++   +P                    K
Sbjct: 41  VMTMG---ALHDGHASLIRAARARVGAKGLVTVTVFVNPLQFGAGEDLDRYPRTLDADLK 97

Query: 81  ILEKMGFSALI 91
           +  + G   + 
Sbjct: 98  VAAEAGADIVF 108


>gi|227889539|ref|ZP_04007344.1| nucleotidyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227850017|gb|EEJ60103.1| nucleotidyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 385

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 30  IHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH  ++ QA   A N PI  V+S        +Q       +     + K     G  
Sbjct: 13  FHSGHEFLMNQARLAAKNDPIIVVMS-----GNYVQRGQ--MAIMDKWQRAKAALASGAD 65

Query: 89  ALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
            +    F    A   A+ F      ++  L V  +  G
Sbjct: 66  LVFELPF--SFAVQPADIFANGSIKMLSDLGVSELFFG 101


>gi|66825131|ref|XP_645920.1| P-type ATPase [Dictyostelium discoideum AX4]
 gi|60474103|gb|EAL72040.1| P-type ATPase [Dictyostelium discoideum AX4]
          Length = 1313

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 64/192 (33%), Gaps = 22/192 (11%)

Query: 36  LILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKF 95
            +L      ++   ++V+  NP  R I+       T+ P   +++  E++     I  +F
Sbjct: 682 EVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQ--EEL---YSITLEF 736

Query: 96  TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR---GEKYGFHTV 152
             + A                 ++T+     +   +D      + ++     +       
Sbjct: 737 LQDFAAD--------------GLRTLCLAYTYLEEEDYQQWNELYKEAAISIQDRDMKVD 782

Query: 153 FIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTAN 212
            + EL      ++ S+ I   L +G     A+L+     I       ++    +GF    
Sbjct: 783 KVSELIERNLSLIGSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHL 842

Query: 213 MQLSPDILLKEG 224
           +     I++  G
Sbjct: 843 LTSDMRIIILNG 854


>gi|223934117|ref|ZP_03626062.1| pantetheine-phosphate adenylyltransferase [Streptococcus suis
           89/1591]
 gi|330833301|ref|YP_004402126.1| phosphopantetheine adenylyltransferase [Streptococcus suis ST3]
 gi|223897203|gb|EEF63619.1| pantetheine-phosphate adenylyltransferase [Streptococcus suis
           89/1591]
 gi|329307524|gb|AEB81940.1| phosphopantetheine adenylyltransferase [Streptococcus suis ST3]
          Length = 162

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  ++E+A  + +   + V +                 L+    +  ILEK
Sbjct: 10  GSFDPITNGHLDLIERASGLFDKLYVGVFT---------NPKKA-GLLTGLERKA-ILEK 58

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           +  G   +            S  + +  V  +   V  ++ G +     +          
Sbjct: 59  LFVGMENIEVV--------LSENELVVDVA-KRYGVTHLVRGLRNATDLEYESSFDF--- 106

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +       I  +   + + VSSS +R  L
Sbjct: 107 YNRQLAPDLETIYLIAKPELKFVSSSQVRELL 138


>gi|224372507|ref|YP_002606879.1| nicotinate (nicotinamide) nucleotide adenylyltransferase [Nautilia
           profundicola AmH]
 gi|223589634|gb|ACM93370.1| nicotinate (nicotinamide) nucleotide adenylyltransferase [Nautilia
           profundicola AmH]
          Length = 178

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  HLGH  I ++A++   +  I ++         +      F+ +PP ++ K L++
Sbjct: 8   GSFDPPHLGHIEIAKKALESGID-KIIIM------PNYLNPLKHSFS-APPELRLKWLKE 59

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
           +   F  +    F  E +       I+   +E  +    I G+                 
Sbjct: 60  IFKDFKNVEVSDF--EISQKKPVYSIE--TIEHFKPDYFIIGSDNLHTLDKWHRINDILK 115

Query: 127 ---FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              F   K    D+ +L K   K                  +SS+ IR  
Sbjct: 116 KVEFIVAKRGTVDKNLLSKYNIKKVLDVDI----------PISSTEIRNC 155


>gi|27262518|gb|AAN87540.1| Pantoate--beta-alanine ligase [Heliobacillus mobilis]
          Length = 315

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 33/178 (18%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           H  G V  +G    +H GH  ++ +A +        V+S   +P                
Sbjct: 48  HTIGLVPTMGY---LHEGHLTLMRRAKENCEK---VVVSIFVNPLQFGAGEDYEEYPRDL 101

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTV 121
           +   ++ +  G   +    F     +   + +   V VE +               V TV
Sbjct: 102 TRDSQLADSAGVDVI----FAPAVKDMYPKGYSSFVEVEQVSDHLCGAARPGHFRGVTTV 157

Query: 122 I------TGTKFR-FGKDRAGDRGILQKRGEK--YGFHTVFIDELRNNKSQIVSSSNI 170
           +             FG+  A    I+++  E    G   V +  +R      +SS N+
Sbjct: 158 VSKLFNIVRPDIAFFGQKDAQQLAIIRRMVEDLNMGIAIVGVPIVREADGLALSSRNV 215


>gi|41406554|ref|NP_959390.1| pantoate--beta-alanine ligase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254773507|ref|ZP_05215023.1| pantoate--beta-alanine ligase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|78099052|sp|Q743Y5|PANC_MYCPA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|41394903|gb|AAS02773.1| PanC [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 308

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 45/180 (25%), Gaps = 31/180 (17%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++     + V+S   +P                     +L   G   
Sbjct: 42  LHDGHLALVRAAKRVP--GSVVVVSIFVNPLQFGAGEDLDAYPRTLDDDLALLRSEGVE- 98

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TVITGTKFR 128
                FT   A          V    L  +                      ++   +  
Sbjct: 99  ---IAFTPTAAAMYPNGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVCKLLQIVRPDRIF 155

Query: 129 FGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           FG+       ++++           V +  +R      +SS N    L       A  L 
Sbjct: 156 FGEKDYQQLVMIRQMVADLNIDVQVVGVPTVREADGLAMSSRN--RYLDATQRELAVTLS 213


>gi|15614251|ref|NP_242554.1| pantothenate synthetase [Bacillus halodurans C-125]
 gi|13431776|sp|Q9KC86|PANC_BACHD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|10174305|dbj|BAB05407.1| pantothenate synthetase [Bacillus halodurans C-125]
          Length = 283

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 35/191 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++++A +  +     V+S   +P                +  
Sbjct: 25  GFVPTMGY---LHEGHLSLVKRAKEEHD---TVVMSIFVNPLQFGAGEDLDTYPRDFARD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW---------------------LE 117
           E++ E  G   L    F   T          ++ V                       L+
Sbjct: 79  EQLAEAEGVDIL----FYPSTDEMYPRPASVRLKVTQGVDVLCGASRPGHFDGVVTVVLK 134

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFID--ELRNNKSQIVSSSNIRTALT 175
           +  ++      FG   A    ++    E        +    +R       SS N+R  L+
Sbjct: 135 LFHLVEPDAAYFGLKDAQQVAVITNMVEDLNVGVQIVPCATVREVDGLAKSSRNVR--LS 192

Query: 176 KGHVLNAAHLL 186
           +     A  L 
Sbjct: 193 EKERKEAPGLY 203


>gi|268319898|ref|YP_003293554.1| hypothetical protein FI9785_1427 [Lactobacillus johnsonii FI9785]
 gi|262398273|emb|CAX67287.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 385

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 30  IHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH  ++ QA   A N PI  V+S        +Q       +     + K     G  
Sbjct: 13  FHSGHEFLMNQARLAAKNDPIIVVMS-----GNYVQRGQ--MAIMDKWQRAKAALASGAD 65

Query: 89  ALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
            +    F    A   A+ F      ++  L V  +  G
Sbjct: 66  LVFELPF--SFAVQPADIFANGSIKMLSDLGVSELFFG 101


>gi|238759899|ref|ZP_04621054.1| Pantothenate synthetase [Yersinia aldovae ATCC 35236]
 gi|238701883|gb|EEP94445.1| Pantothenate synthetase [Yersinia aldovae ATCC 35236]
          Length = 284

 Score = 37.5 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDARTRAD---VVVVSIFVNPLQFERPDDLACYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+        +  V+   + T++ G                  
Sbjct: 83  TRHGVDLV----FAPAAADIYPAGLESQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
                    FG+       +++K     G+    V +  +R      +SS
Sbjct: 139 NLVQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSS 188


>gi|330466839|ref|YP_004404582.1| cytidyltransferase-like protein [Verrucosispora maris AB-18-032]
 gi|328809810|gb|AEB43982.1| cytidyltransferase-like protein [Verrucosispora maris AB-18-032]
          Length = 471

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT--IIQSSSPIFTLSPPSIQ 78
           V   G FD +H GH   L+ A ++ +     V+  N       +     P+      + +
Sbjct: 331 VATGGCFDLLHAGHLATLQAARQLGD---CLVVCLNSDTSVSGLKGPDRPVI---GQADR 384

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            ++L  +    A++ ++ +   A  S            L     + G  +  G    G+ 
Sbjct: 385 GRLLAALSCVDAVVIFEESTPAAALSW-----------LRPDIWVKGGDYATG-GADGEA 432

Query: 138 GILQKRGEKYGFHTVFID 155
               +   ++G H+V + 
Sbjct: 433 LPEAEILRRWGGHSVVVP 450


>gi|308061311|gb|ADO03199.1| pantoate--beta-alanine ligase [Helicobacter pylori Cuz20]
          Length = 276

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 10/119 (8%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRALETITALREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +P     +        P      + E +G SA+     T E   Y  EQ ++     +L
Sbjct: 55  NPTQFGANEDFNAYPRPLEKDLALCEGLGVSAVF-LPKTSEMYPYEIEQRLKLYAPTFL 112


>gi|293408358|ref|ZP_06652197.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli B354]
 gi|291471536|gb|EFF14019.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Escherichia coli B354]
          Length = 134

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 16/110 (14%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V+  G FD  H+GH  +L++A  +     + V   +     I +             +
Sbjct: 2   KTVITFGTFDVFHVGHLRLLQRARTLGERLLVGV---SSDALNIAKKGRAPVY--HQDDR 56

Query: 79  EKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
             I+  +     +    F  E+    AE       +       ++ G  +
Sbjct: 57  MAIIAGLACVDGV----FLEESLEQKAE------YLRGYRADILVMGDDW 96


>gi|330807190|ref|YP_004351652.1| bifunctional protein: D-beta-D-heptose 7-phosphate kinase;
           D-beta-D-heptose 1-phosphate adenosyltransferase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375298|gb|AEA66648.1| Putative bifunctional protein: D-beta-D-heptose 7-phosphate kinase;
           D-beta-D-heptose 1-phosphate adenosyltransferase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 473

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 16/118 (13%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   + V        ++ +   P  
Sbjct: 332 DDARAHNERIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            ++    +  +L  +G    +I        +  + E  +++V     +   ++ G  +
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVI------SFSEGTPENLLRQV-----KPDVLVKGGDY 434


>gi|294851716|ref|ZP_06792389.1| pantoate-beta-alanine ligase [Brucella sp. NVSL 07-0026]
 gi|294820305|gb|EFG37304.1| pantoate-beta-alanine ligase [Brucella sp. NVSL 07-0026]
          Length = 173

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 16/123 (13%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H IE  +      +      G V  +G    +H GH  ++ +A    +   +T++S
Sbjct: 1   MQIIHTIEELRQALAPARQQGKKIGFVPTMGY---LHKGHLELVRRARVEND---VTLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +               +L       L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYL----FAPTVSDMYPRPMQTVVDVP 110

Query: 115 WLE 117
            L 
Sbjct: 111 PLG 113


>gi|262404749|ref|ZP_06081304.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. RC586]
 gi|262349781|gb|EEY98919.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Vibrio sp. RC586]
          Length = 476

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           IE  +      +  V+  G FD +H GH   L  A ++ +   + V + +   + +    
Sbjct: 329 IEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNT-DESVKRLKGHG 387

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P+   +    +  +L  +G    ++   F+ +    + ++ I  VL   L     + G 
Sbjct: 388 RPV---NSTDRRMAVLAGLGAVDWVV--PFSED----TPQRLIAAVLPNLL-----VKGG 433

Query: 126 KFR 128
            ++
Sbjct: 434 DYK 436


>gi|209965807|ref|YP_002298722.1| bifunctional protein hldE [Rhodospirillum centenum SW]
 gi|209959273|gb|ACI99909.1| bifunctional protein hldE [Rhodospirillum centenum SW]
          Length = 487

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 34/135 (25%)

Query: 6   NIEINQSLPNHLKGGVVAIGN----FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            ++  Q      +   + +G     FD +H GH  +L QA    +   +           
Sbjct: 338 GLDAAQERVARWRRKGLTVGFTNGCFDLLHPGHVSLLAQARAACDRLVVG---------- 387

Query: 62  IIQSSSPIFTL---SPP----SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLV 113
            + S + +  L   + P    + +  +L  +     ++ ++                 L+
Sbjct: 388 -LNSDASVRRLKGETRPVQGEAARATVLASLADVDLVVIFEEDTPLR-----------LI 435

Query: 114 EWLEVKTVITGTKFR 128
           E L    ++ G  + 
Sbjct: 436 ETLRPDVLVKGADYT 450


>gi|124009559|ref|ZP_01694233.1| RfaE bifunctional protein, domain II [Microscilla marina ATCC
           23134]
 gi|123984798|gb|EAY24773.1| RfaE bifunctional protein, domain II [Microscilla marina ATCC
           23134]
          Length = 162

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +HLGH   LE+A ++ +   + + + +   R  ++ SS    + P   + +
Sbjct: 29  VFTNGCFDIVHLGHLDYLEKARQLGHKLVVGLNTDDSIKR--LKGSSRP--IIPQIARAR 84

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +    A++         + +  Q I     + L    +  G  +        D  +
Sbjct: 85  LLAALEFVDAVVL------FGDDTPLQLI-----KTLLPDVLTKGNDYAIENIIGADVVL 133

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +      G     I+ +        +SS I   LT   
Sbjct: 134 AK------GGSVETIELVEG----YSTSSIIEKILTVHQ 162


>gi|327302262|ref|XP_003235823.1| cholinephosphate cytidylyltransferase [Trichophyton rubrum CBS
           118892]
 gi|326461165|gb|EGD86618.1| cholinephosphate cytidylyltransferase [Trichophyton rubrum CBS
           118892]
          Length = 451

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 65/202 (32%), Gaps = 32/202 (15%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSP 68
               P      V A G FD  HLGH   LEQA  +  N+ + V ++ +     +      
Sbjct: 150 TNPPPTDRPVRVYADGVFDLFHLGHMRQLEQAKTLIPNTYLIVGVTGD-----VETHKRK 204

Query: 69  IFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV--ITGT 125
             T+   + + + +        +I               +I  V  E+LE   +  +   
Sbjct: 205 GLTVLNETERAETIRHCKWVDEVI-----------PNCPWI--VTPEFLEEHQIDYVAHD 251

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHVLNAAH 184
              +G D   D     K+  K+         L   +++ VS++  I   +       A  
Sbjct: 252 DLPYGADEGDDIYAPIKQMGKF---------LVTQRTEGVSTTGIITKVVRDYDKYIARQ 302

Query: 185 LLGYRFTIESDVIHGEKIGRTL 206
                   E +V   +K    +
Sbjct: 303 FKRGASRQELNVSWVKKNELEI 324


>gi|238797186|ref|ZP_04640688.1| Pantothenate synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719033|gb|EEQ10847.1| Pantothenate synthetase [Yersinia mollaretii ATCC 43969]
          Length = 284

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 27/166 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V++   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDAKTRAD---VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLET-ANYSAEQFIQKVLVEWL-----------EVKTVI------TG 124
            + G   +          A   ++ +++   +  +            V T++        
Sbjct: 83  TRHGVDLVFAPAANDIYPAGLESQTYVEVPALSTILEGASRPGHFRGVSTIVSKLFNLVQ 142

Query: 125 TK-FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
                FG+       +++K     G+    V +  +R      +SS
Sbjct: 143 PDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSS 188


>gi|226940324|ref|YP_002795398.1| pantoate--beta-alanine ligase [Laribacter hongkongensis HLHK9]
 gi|254778229|sp|C1D7E9|PANC_LARHH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226715251|gb|ACO74389.1| PanC [Laribacter hongkongensis HLHK9]
          Length = 277

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 68/228 (29%), Gaps = 30/228 (13%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M +   IE  +S         +   +GN   +H GH  ++ +A K A      V+S   +
Sbjct: 1   MDIIRTIEEMRSWRQKAGRVALVPTMGN---LHEGHLALVREAKKQAER---VVVSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL-----------IRYKFTLETANYSAEQF 107
                Q                 L   G  AL           IR  F +E  +   E  
Sbjct: 55  RLQFGQGEDFDSYPRTFEADRDKLAAAGVDALFLPDERELYPRIRQDFNVEPPHIQDELC 114

Query: 108 IQKVLVEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYG--FHTVFIDELR 158
                  +  V TV+             FGK       I+Q            V +D  R
Sbjct: 115 GAFRPGHFRGVATVVTKLFNIVQPDAACFGKKDFQQLHIIQAMVADLNQPVKVVPVDIGR 174

Query: 159 NNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                 +SS N    L+ G    A  L      I  ++I GE    +L
Sbjct: 175 AADGLALSSRN--GYLSAGEREEAPRLFRELSRIRENLIDGENDYASL 220


>gi|186474970|ref|YP_001856440.1| rfaE bifunctional protein [Burkholderia phymatum STM815]
 gi|184191429|gb|ACC69394.1| rfaE bifunctional protein [Burkholderia phymatum STM815]
          Length = 160

 Score = 37.5 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 15/119 (12%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P+     V   G FD +H GH   L  A  +     + V S +   R + +       ++
Sbjct: 20  PSLTGPVVFTNGVFDILHRGHVTYLADAKALGATLIVGVNS-DASVRMLGKGDDRP--IN 76

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
             S +  +L  +     ++           +    I     E L    ++ G  +   K
Sbjct: 77  NESDRMALLAALESVDWVVC------FGEQTPVALI-----EALHPDVLVKGGDYDMDK 124


>gi|261837916|gb|ACX97682.1| ADP-heptose synthase [Helicobacter pylori 51]
          Length = 463

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L  H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLERHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|221134039|ref|ZP_03560344.1| glycerol-3-phosphate cytidyltransferase [Glaciecola sp. HTCC2999]
          Length = 131

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 16/108 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H+GH  IL++A +  ++  + + S         +       +     +E+
Sbjct: 4   IITFGTFDVLHIGHIRILKRAREHGDHLIVGLSSDE---LNFNKKGRNP--IYSFQSREE 58

Query: 81  ILEKMGFSALIRYKF-TLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           +L  M        +F        S EQ  + +L        ++ G  +
Sbjct: 59  LLSSM--------RFVDEVFKEESLEQKREYIL--KYNADVLVMGDDW 96


>gi|318607080|emb|CBY28578.1| pantoate--beta-alanine ligase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 284

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 39/225 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDAKTRAD---VVVVSIFVNPMQFERPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALI------RYKFTLETANYSAEQFIQKVLVEWL-----------EVKTVI--- 122
            + G   +        Y      A   A+ ++    +  +            V T++   
Sbjct: 83  TRHGVDLVFAPAAADVYP-----AGLEAQTYVDVPALSTILEGASRPGHFRGVSTIVSKL 137

Query: 123 ---TGTK-FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTK 176
                     FG+       +++K     G+    V +  +R      +SS N    L+ 
Sbjct: 138 FNLVQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPIVRAKDGLALSSRN--GYLSA 195

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
                A  L      +   +  GE+    L   TA          
Sbjct: 196 EERKIAPQLYKIMQALAEKLALGERQIDDLLADTAEQLRDAGFTP 240


>gi|282901317|ref|ZP_06309243.1| Cytidylate kinase [Cylindrospermopsis raciborskii CS-505]
 gi|281193812|gb|EFA68783.1| Cytidylate kinase [Cylindrospermopsis raciborskii CS-505]
          Length = 553

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H+GH  ++++A +  +     V+S   +P                   + + E+ G   
Sbjct: 50  LHIGHLSLIQRAREENH---TVVVSVFVNPLQFGPQEDYQRYPRTLDQDKLLCEQAGVDV 106

Query: 90  LI 91
           + 
Sbjct: 107 IF 108


>gi|289191899|ref|YP_003457840.1| rfaE bifunctional protein [Methanocaldococcus sp. FS406-22]
 gi|288938349|gb|ADC69104.1| rfaE bifunctional protein [Methanocaldococcus sp. FS406-22]
          Length = 157

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 31/173 (17%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           +I + L N     V   G FD IH GH   L +A K+ +   I  ++ +   + I  +  
Sbjct: 11  DIVRELKNQNLKIVFTNGCFDIIHRGHVEYLNKAKKLGDIL-IVGINSDKSIKKIKGNKR 69

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P   + P   +  +L+ +          F  E    +  + I K++   + VK    G  
Sbjct: 70  P---IIPLYSRAYVLDNLKAVD--FVVPFDEE----TPIELI-KIIKPDIHVK----GGD 115

Query: 127 FRFGKDRAGDRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           ++           L +    + YG     I  +     +  S++ I   + + 
Sbjct: 116 YK--------EEDLPEAEIVKSYGGEIKIIPLI-----EGFSTTKIIEWVLEK 155


>gi|146296801|ref|YP_001180572.1| hypothetical protein Csac_1796 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166980232|sp|A4XKE6|Y1796_CALS8 RecName: Full=UPF0348 protein Csac_1796
 gi|145410377|gb|ABP67381.1| protein of unknown function DUF795 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 400

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I   +  + V+S        IQ   P         +  +L   G  
Sbjct: 13  FHNGHLYHLQKTKEITGADVVVAVMS-----GNFIQRGEPAIVNKWARTKMALLN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  V+ G++       AGD  +L+K    
Sbjct: 66  VVFELPF--AYACNSAEVFAYGAISILNSLGVNWVVFGSE-------AGDISLLKKIAMH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|320354184|ref|YP_004195523.1| glycerol-3-phosphate cytidylyltransferase [Desulfobulbus
           propionicus DSM 2032]
 gi|320122686|gb|ADW18232.1| Glycerol-3-phosphate cytidylyltransferase [Desulfobulbus
           propionicus DSM 2032]
          Length = 130

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 24/141 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV----LSFNPHPRTIIQSSSPIFTLSPPS 76
           V+  G FD  H+GH  IL+++ K+ +   + V    +SF+             + +    
Sbjct: 4   VITFGTFDVFHIGHLSILDRSRKLGDFLIVGVSTDQMSFD---------KKNRYPIYSQH 54

Query: 77  IQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            + +I++ +     +    F             +  L+E  +   ++ G  +    D+  
Sbjct: 55  ERLQIIQSLRCVDEVF---FEESL------DLKRNYLLE-YKADILVMGDDWAGKFDKFN 104

Query: 136 DRGILQKRGEKYGFHTVFIDE 156
           D   +          T  + E
Sbjct: 105 DIVRVIYLPRTPSISTTEVIE 125


>gi|308063348|gb|ADO05235.1| ADP-heptose synthase [Helicobacter pylori Sat464]
          Length = 463

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L +H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|238752646|ref|ZP_04614118.1| Transcriptional regulator nadR [Yersinia rohdei ATCC 43380]
 gi|238709160|gb|EEQ01406.1| Transcriptional regulator nadR [Yersinia rohdei ATCC 43380]
          Length = 422

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCFDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + +  ++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKTFMAEKGIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +        E++G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPHYREQFGIETILIDPERSF--MNISGRQIRR 213


>gi|217072392|gb|ACJ84556.1| unknown [Medicago truncatula]
          Length = 382

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
            F        +P   K  ++  G+F+ +H GH  ++E A +I  +       F     + 
Sbjct: 197 CFKIYPFRSEIPAERK--IILPGSFNPLHDGHIKLMEVATRICGDGYPC---FE---LSA 248

Query: 63  IQSSSPIFTLSPPSIQEKILEKMGFSALI-RYKFTLETANY---SAEQFIQKVLVEWLEV 118
           + +  P  ++S    +    EK+G + +I    +  + A     SA        V  +  
Sbjct: 249 VNADKPPLSVSQIKDRVNQFEKVGQTVIISNQPYFYKKAELFPGSAFVIGADTAVRLINP 308

Query: 119 KT----------VITG---TKFRF---GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKS 162
           K           ++ G   T   F   G++  G   +L           +FI        
Sbjct: 309 KYYDGDYNKMLKILGGCKETGCTFLVAGRNVDGAFKVLDDLNVPEEIKDMFISIPAEQFR 368

Query: 163 QIVSSSNIRT 172
             +SS+ IR 
Sbjct: 369 MDISSTEIRK 378


>gi|307353085|ref|YP_003894136.1| cytidyltransferase-like domain-containing protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156318|gb|ADN35698.1| cytidyltransferase-related domain protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 149

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 51/147 (34%), Gaps = 15/147 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH  ++E++  IA      ++  +                 P  +++K L  
Sbjct: 4   GTFDPLHDGHKKLIERSFFIAGPGGHVIIGLSGD--EFANRKLHPIR--PYEVRKKEL-- 57

Query: 85  MGFSALIRYKFTLETA-NYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                L    F  E +    +++F   +  ++     ++   +  F    A +   L++ 
Sbjct: 58  --VDFLEESNFGSEWSIEMLSDRFGSSLDSDF---DAIVVSEE-TF--PTAIEINKLRRE 109

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI 170
                     I  +     + +SS+ I
Sbjct: 110 KGMKKVDIHQITCVLAEDGRWISSTRI 136


>gi|323524587|ref|YP_004226740.1| rfaE bifunctional protein [Burkholderia sp. CCGE1001]
 gi|323381589|gb|ADX53680.1| rfaE bifunctional protein [Burkholderia sp. CCGE1001]
          Length = 160

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 27/123 (21%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSS 67
           P      V   G FD +H GH   L  A           NS  +V       R + +   
Sbjct: 20  PTLKAPVVFTNGVFDILHRGHVTYLADAKAQGACLIVGVNSDASV-------RMLGKGDD 72

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
               ++  + +  +L  +     ++        A  +  + I       L    ++ G  
Sbjct: 73  RP--INSEADRMALLAALESVDYVVC------FAEKTPVELIS-----ALRPDVLVKGGD 119

Query: 127 FRF 129
           +  
Sbjct: 120 YDM 122


>gi|269137827|ref|YP_003294527.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Edwardsiella tarda EIB202]
 gi|267983487|gb|ACY83316.1| fused heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Edwardsiella tarda EIB202]
 gi|304557882|gb|ADM40546.1| ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Edwardsiella tarda FL6-60]
          Length = 477

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V S +   R +     P+   +P + +  
Sbjct: 343 VMTNGVFDILHAGHVSYLANARRLGDRLIVAVNS-DASTRRLKGPERPV---NPLTQRML 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     +I   F  +    + ++ I ++L + L     + G  +R
Sbjct: 399 VLAALESVDWVI--PFEED----TPQRIIAEILPDLL-----VKGGDYR 436


>gi|294882581|ref|XP_002769749.1| hypothetical protein Pmar_PMAR004830 [Perkinsus marinus ATCC 50983]
 gi|239873498|gb|EER02467.1| hypothetical protein Pmar_PMAR004830 [Perkinsus marinus ATCC 50983]
          Length = 547

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 67/225 (29%), Gaps = 40/225 (17%)

Query: 3   VFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQ-AIKIANNSPITVLSFNPHPRT 61
           V H    +  LP++    V+  G FD +H+GH  ++ +  +       + ++        
Sbjct: 134 VHHAGHHSSPLPHYDH--VLFAGTFDHLHVGHRAVITRSLLMARKTLRLALV-----AGE 186

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ---FIQKVLVEWLEV 118
           ++Q       L P  ++E+     G       +F  +            I  +  + +  
Sbjct: 187 LLQHKRLAKALQPFHVRER-----GV-----LQFVQDIRPTDWHCDVVIIPDITRDPIGP 236

Query: 119 KTVITGTKFRF----GKDRAGDRGILQKRGEKYGFHTVFID----ELRNNKSQIVSSSNI 170
              +    F       +   G   + + R E        ++       +     VSS+++
Sbjct: 237 ARTL--RDFDCLVVTTETAKGGVVVNEARKEAGCPEVAIVEVALRSQGSQHGGKVSSTDV 294

Query: 171 RTAL---------TKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
           R  +                   L+     ++  V   +     L
Sbjct: 295 REYMSDKAGGEEALNAMYDKWYQLIAKACAVDGVVDDDKHEQLQL 339


>gi|228993996|ref|ZP_04153898.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus pseudomycoides
           DSM 12442]
 gi|228765794|gb|EEM14446.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus pseudomycoides
           DSM 12442]
          Length = 131

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 37/159 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + V S                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKDLGDYLIVAVSSDE------FNKLKNKKSYHSYENRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE--VKTVITGTKFRFGKDRAGDR 137
           ILE +     +I             E   ++   + +   V   + G  +       G+ 
Sbjct: 58  ILEAVRYVDEVI------------PEHNWEQKAKDVVNHDVDIFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             L +         V++      ++  +S++ I+  L +
Sbjct: 100 DELDEYC-----EVVYLP-----RTAGISTTKIKKELVQ 128


>gi|227552960|ref|ZP_03983009.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HH22]
 gi|229546146|ref|ZP_04434871.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1322]
 gi|256852824|ref|ZP_05558194.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T8]
 gi|307273867|ref|ZP_07555088.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0855]
 gi|307278791|ref|ZP_07559854.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0860]
 gi|307291158|ref|ZP_07571043.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0411]
 gi|312902253|ref|ZP_07761461.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0635]
 gi|227177930|gb|EEI58902.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           HH22]
 gi|229308670|gb|EEN74657.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1322]
 gi|256711283|gb|EEU26321.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T8]
 gi|306497812|gb|EFM67344.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0411]
 gi|306504462|gb|EFM73669.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0860]
 gi|306509469|gb|EFM78518.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0855]
 gi|310634312|gb|EFQ17595.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0635]
 gi|315027628|gb|EFT39560.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX2137]
 gi|315029180|gb|EFT41112.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX4000]
 gi|315144578|gb|EFT88594.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX2141]
 gi|315160992|gb|EFU05009.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0645]
 gi|315168334|gb|EFU12351.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1341]
 gi|315170915|gb|EFU14932.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1342]
 gi|315174611|gb|EFU18628.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1346]
 gi|315573658|gb|EFU85849.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0309B]
 gi|315577455|gb|EFU89646.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0630]
 gi|315582727|gb|EFU94918.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0309A]
          Length = 136

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A +  +   + + +                +      +++
Sbjct: 8   ILTYGTFDLLHYGHINLLKKAKQQGDYLIVGLST------DAFNLEKKKQSYFSYEKRKQ 61

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q +  +     ++ T++ G  +       G    
Sbjct: 62  LLEAIRYVDLVIP--------ETSWKQKVSDIA--EFKIDTLVMGDDW------QGAFDF 105

Query: 140 LQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTAL 174
           L               ++    ++  VS++ I+  L
Sbjct: 106 L---------EVETTAKVLYLPRTPEVSTTQIKKEL 132


>gi|160890952|ref|ZP_02071955.1| hypothetical protein BACUNI_03397 [Bacteroides uniformis ATCC 8492]
 gi|317481481|ref|ZP_07940547.1| pantoate-beta-alanine ligase [Bacteroides sp. 4_1_36]
 gi|156859173|gb|EDO52604.1| hypothetical protein BACUNI_03397 [Bacteroides uniformis ATCC 8492]
 gi|316902391|gb|EFV24279.1| pantoate-beta-alanine ligase [Bacteroides sp. 4_1_36]
          Length = 285

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 33/197 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M + H I+  Q+  + L+      G V  +G    +H GH  ++++ +   + + ++V  
Sbjct: 1   MEIVHTIKDLQAGLSALRAQGKKVGLVPTMG---ALHAGHASLVKRCVAENDAAVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +     P    ++LE+ G           +     T   + Y+   
Sbjct: 58  ---NPTQFNDKNDLVKYPRTPEADCRLLEECGAAFVFAPSVEEMYPEPDTRRFS-YAPLD 113

Query: 107 FIQKVL---VEWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVFI-- 154
            + +       +  V  ++             FG+       I+++   +  +    +  
Sbjct: 114 TVMEGAFRPGHFNGVCQIVSKLFDAVQPDRAYFGEKDFQQLAIIREMVRQMKYPLEIVGC 173

Query: 155 DELRNNKSQIVSSSNIR 171
             +R      +SS N R
Sbjct: 174 PIVREEDGLALSSRNAR 190


>gi|83954135|ref|ZP_00962855.1| pantoate--beta-alanine ligase [Sulfitobacter sp. NAS-14.1]
 gi|83841172|gb|EAP80342.1| pantoate--beta-alanine ligase [Sulfitobacter sp. NAS-14.1]
          Length = 281

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 47/180 (26%), Gaps = 39/180 (21%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A +  +     +++   +P+                   + L  +    
Sbjct: 35  LHQGHLSLVRAAKEACDR---VIVTIFINPKQFNNPEDYKNYPRTEEEDARKLIALKADV 91

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVIT-------GTKFR 128
           +       +        F   V VE +               V T++T         K  
Sbjct: 92  VYV----PDGEQMYPNGFATTVSVEGITQGLCGAHRAGHFDGVATIVTKLFTQTQADKAF 147

Query: 129 FGKDRAGDRGILQ-----KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
           FG+    D   LQ      R        +    +R      +SS   R  L        A
Sbjct: 148 FGEK---DYQQLQVVTRLARDLDLPIEVIGCPTIREEDGLAMSS---RNLLLSDRARTWA 201


>gi|285808212|gb|ADC35746.1| hypothetical protein [uncultured bacterium 293]
          Length = 154

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 21/126 (16%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLS 73
           +  +  V   G FD +H GH  +LE A        + V+  N       ++       L 
Sbjct: 17  DEGRAVVFTNGCFDLLHPGHVALLEAARA---EGEVLVVGLNSDASVRGLKGEGRP--LL 71

Query: 74  PPSIQEK-ILEKMGFSALIRY--KFTLET------------ANYSAEQFIQKVLVEWLEV 118
           P   + + +L       +I Y     LE             A+++ E  + +  VE +  
Sbjct: 72  PEQERAEALLALEAVDRVIVYSDPTPLELVRALRPDVLVKGADWAVEDIVGRAEVEEVGG 131

Query: 119 KTVITG 124
           + V  G
Sbjct: 132 RVVRVG 137


>gi|306836713|ref|ZP_07469676.1| pantoate-beta-alanine ligase [Corynebacterium accolens ATCC 49726]
 gi|304567391|gb|EFM42993.1| pantoate-beta-alanine ligase [Corynebacterium accolens ATCC 49726]
          Length = 273

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 63/212 (29%), Gaps = 40/212 (18%)

Query: 1   MHVFHN---IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +      +   ++  +   G V  +G    +H GH  ++ +A +  +    +V     
Sbjct: 1   MQILTTKSELRAFRAAASGSVGLVPTMG---ALHDGHASLIRRAREDNDTVVCSVFV--- 54

Query: 58  HPRTII---QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANY----SAEQFIQK 110
           +P                        +L+ +G  A+    F           +   +++ 
Sbjct: 55  NPLQFTDLGDCEDYRAYPRTLDADAALLDSLGVDAV----FAPSVEEMYPGGTPRVWVRT 110

Query: 111 VLVEWL------------------EVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FH 150
             +  +                  ++  ++T  +  FG+  A    I+++          
Sbjct: 111 GEMGSVLEGASRPGHFDGVATVVSKLFHLVTPDRAYFGQKDAQQVAIIRRLVADLDLPLD 170

Query: 151 TVFIDELRNNKSQIVSSSNIRTALTKGHVLNA 182
            + +  +R       SS N R +  +     A
Sbjct: 171 IISVPIVRATDGVAESSRNARLSAAEREQAVA 202


>gi|305664808|ref|YP_003861095.1| putative glycerol-3-phosphate cytidyltransferase [Maribacter sp.
           HTCC2170]
 gi|88707930|gb|EAR00169.1| probable glycerol-3-phosphate cytidyltransferase [Maribacter sp.
           HTCC2170]
          Length = 204

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 17/107 (15%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H GH  IL ++ ++ +   + V +       +I+       + P   + K++
Sbjct: 79  TSGAFDIFHFGHLNILIKSKELCDYLIVGVST-----DELIEREKGKKPVIPFHERIKVV 133

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           + +G    +I             E   ++ +V+  ++  +  G  +R
Sbjct: 134 QSIGLVDEVI-----------PQEDKNKQKIVDSYKIDAISVGDDWR 169


>gi|322370303|ref|ZP_08044862.1| glycerol-3-phosphate cytidyltransferase-like protein [Haladaptatus
           paucihalophilus DX253]
 gi|320550011|gb|EFW91666.1| glycerol-3-phosphate cytidyltransferase-like protein [Haladaptatus
           paucihalophilus DX253]
          Length = 141

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 29/163 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +H GH   L  A  + +     +++     R  +    P   +     +  
Sbjct: 4   VLAQGTFDILHPGHVHYLRDAAGMGDRL-SVIIA----RRENVTHKEPP--ILSNRQRRD 56

Query: 81  ILEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++E +G    AL+ +   +    +S         +E L+   ++ G        +  D  
Sbjct: 57  MIEALGVVDDALVGHPEDI----FSP--------IEDLDPDIIVLGYD------QHHDDA 98

Query: 139 ILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGHV 179
            ++   ++ G   V      L  +  +++S+  I   + +   
Sbjct: 99  AIEAELDRRGIECVVRRASPLDPDDDELLSTGRIIDRICEERC 141


>gi|283955289|ref|ZP_06372789.1| hypothetical protein C414_000440027 [Campylobacter jejuni subsp.
          jejuni 414]
 gi|283793203|gb|EFC31972.1| hypothetical protein C414_000440027 [Campylobacter jejuni subsp.
          jejuni 414]
          Length = 94

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
          +  V+  G FD  H GH  +L++A    +   + V S       +  S    + L     
Sbjct: 5  RKRVLTFGTFDLFHFGHLKLLQRASNFGDELFVGVSS-----DELNFSKKGRYPLFNEKE 59

Query: 78 QEKILEKM 85
          +  IL  +
Sbjct: 60 RACILSSL 67


>gi|227518430|ref|ZP_03948479.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0104]
 gi|227074108|gb|EEI12071.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0104]
          Length = 136

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 33/160 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A +  +   + + +                +      +++
Sbjct: 8   ILTYGTFDLLHYGHINLLKKAKQQGDYLIVGLST------DAFNLEKKKQSYFSYEKRKQ 61

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q +  +     ++ T++ G  +       G    
Sbjct: 62  LLEAIRYVDLVIP--------ETSWKQKVSDIA--EFKIDTLVMGDDW------QGAFDF 105

Query: 140 LQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTALTKGH 178
           L               ++    ++  VS++ I+  L    
Sbjct: 106 L---------EVETTAKVLYLPRTPEVSTTQIKKELYYNE 136


>gi|254512417|ref|ZP_05124484.1| pantoate--beta-alanine ligase [Rhodobacteraceae bacterium KLH11]
 gi|221536128|gb|EEE39116.1| pantoate--beta-alanine ligase [Rhodobacteraceae bacterium KLH11]
          Length = 283

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 35/189 (18%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++E A   A+     +++   +P+                  
Sbjct: 27  GVVPTMG---ALHQGHQSLVEAAKAGADR---VIVTIFVNPKQFNNPEDLANYPRTEFED 80

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVIT- 123
            + L+     A+       + A    + F   V V  L               V TV+  
Sbjct: 81  AEKLDPFQVDAIYV----PDPAEIYPQGFATTVSVAGLTDVMEGEFRPGHFDGVATVVAK 136

Query: 124 ------GTKFRFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSSSNIRTALT 175
                   +  FG+       ++++           V    +R      +SS N R  L+
Sbjct: 137 LFLQTQADRAYFGEKDYQQLMVVRRMARDLDIPIEVVGCPTVREASGLAMSSRNQR--LS 194

Query: 176 KGHVLNAAH 184
              +  AA 
Sbjct: 195 ADGLRVAAE 203


>gi|83956341|ref|ZP_00964767.1| pantoate--beta-alanine ligase [Sulfitobacter sp. NAS-14.1]
 gi|83839446|gb|EAP78628.1| pantoate--beta-alanine ligase [Sulfitobacter sp. NAS-14.1]
          Length = 295

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 12/98 (12%)

Query: 1  MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M         + L N  +        V+ +G    +H GH  +++ A   A+     +++
Sbjct: 1  MKTIRRKSELRDLTNSWRRAGETIGVVLTMG---ALHDGHLSLVKAAHSRADR---VIVT 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
             +PR                   +IL  +    L  
Sbjct: 55 IFVNPRQFNNPEDLAKYPKTEDNDARILGPLAIDVLYI 92


>gi|302893272|ref|XP_003045517.1| hypothetical protein NECHADRAFT_39295 [Nectria haematococca mpVI
           77-13-4]
 gi|256726443|gb|EEU39804.1| hypothetical protein NECHADRAFT_39295 [Nectria haematococca mpVI
           77-13-4]
          Length = 599

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 17/107 (15%)

Query: 194 SDVIHGEKI-GRTLGFPTANMQLSPD--ILLKEGVYAIRFRT--------QDQTSYSGVA 242
             V+HG  +  R LG PTAN+   PD   +   GV+A   R          D   Y+ + 
Sbjct: 400 GKVVHGTGLSTRELGIPTANLTEVPDEVKMRMGGVFAAWARLVPNKGMEDIDDDWYAAIV 459

Query: 243 NF--GRN--PTMVPNGPLLLESFIFDFSQEIYGQ-RCTVSFFDYLRP 284
                RN  P +V    + +  FI DF +  + + R  V    +L P
Sbjct: 460 TIAPLRNGPPGVVQRNKVSV-HFIHDFEEVTFFEIRVKVMLMGFLHP 505


>gi|159039879|ref|YP_001539132.1| rfaE bifunctional protein [Salinispora arenicola CNS-205]
 gi|157918714|gb|ABW00142.1| rfaE bifunctional protein [Salinispora arenicola CNS-205]
          Length = 643

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   LEQA  + +   +  ++ +   R +  +  P+   +P   
Sbjct: 499 RSVVFTNGCFDVLHPGHVRYLEQARALGD-LLVVAVNADGSVRRLKGADRPV---NPVED 554

Query: 78  QEKILEKM-GFSALIRYKFT 96
           +  +L  +     ++ ++  
Sbjct: 555 RVALLAALTHVDHVVVFEED 574


>gi|188526818|ref|YP_001909505.1| pantoate--beta-alanine ligase [Helicobacter pylori Shi470]
 gi|226700762|sp|B2UW10|PANC_HELPS RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|188143058|gb|ACD47475.1| pantoate--beta-alanine ligase [Helicobacter pylori Shi470]
          Length = 276

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRALETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + E +G +A+  
Sbjct: 55 NPTQFGANEDFSAYPRPLEKDLALCEGLGVNAVFV 89


>gi|312876072|ref|ZP_07736061.1| protein of unknown function DUF795 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797270|gb|EFR13610.1| protein of unknown function DUF795 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 400

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  ++ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFIVFGSEC-------GDIDKLKETAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|270158004|ref|ZP_06186661.1| pantoate--beta-alanine ligase [Legionella longbeachae D-4968]
 gi|269990029|gb|EEZ96283.1| pantoate--beta-alanine ligase [Legionella longbeachae D-4968]
          Length = 254

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+E   +    L      G    +GN   +H+GH  +   + K  + +  ++   
Sbjct: 2  MQIFHNLEEWIAFRKTLATELTIGFAPTMGN---LHVGHASLFTTSQKENHYTVSSLFV- 57

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P    Q+              +++E  G    I 
Sbjct: 58 --NPTQFNQAEDFKLYPRTLEADLRMMEDSGVDFCIL 92


>gi|269218263|ref|ZP_06162117.1| pantoate--beta-alanine ligase [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212391|gb|EEZ78731.1| pantoate--beta-alanine ligase [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 357

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A K A+N    V+S   +P                     
Sbjct: 52  VMTMG---ALHEGHLALVRAAKKAADN---VVVSIFVNPLQFGPGEDYEAYPRDLEADLA 105

Query: 81  ILEKMGFSALI 91
           +LE +G  A+ 
Sbjct: 106 LLEAVGVQAVY 116


>gi|289163729|ref|YP_003453867.1| pantothenate synthetases [Legionella longbeachae NSW150]
 gi|288856902|emb|CBJ10716.1| putative pantothenate synthetases [Legionella longbeachae NSW150]
          Length = 253

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+E   +    L      G    +GN   +H+GH  +   + K  + +  ++   
Sbjct: 1  MQIFHNLEEWIAFRKTLATELTIGFAPTMGN---LHVGHASLFTTSQKENHYTVSSLFV- 56

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P    Q+              +++E  G    I 
Sbjct: 57 --NPTQFNQAEDFKLYPRTLEADLRMMEDSGVDFCIL 91


>gi|150865211|ref|XP_001384334.2| phosphorylcholine transferase [Scheffersomyces stipitis CBS 6054]
 gi|149386467|gb|ABN66305.2| phosphorylcholine transferase [Scheffersomyces stipitis CBS 6054]
          Length = 475

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 33/207 (15%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT--VLSFNPHPRTI 62
           H  + N   P      + A G FD  HLGH   LEQA K   +  +   V      P  +
Sbjct: 131 HGFKFNIP-PEDRPIRIYADGVFDLFHLGHMKQLEQAKKAFPSVELVCGV------PSDV 183

Query: 63  I-QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTV 121
                  +  L+ P   E +L       ++                   V  E+L+   +
Sbjct: 184 ETHKRKGLTVLTDPQRCETLLHCKWVDEVV------------PNAPWC-VTPEFLKDHKI 230

Query: 122 -ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHV 179
                        + D   + K  ++ G        L   +++ +S+S  I   +     
Sbjct: 231 DYVAHDDL--PYASADTDDIYKPIKELGMF------LTTQRTEGISTSDIITKIIRDYDK 282

Query: 180 LNAAHLLGYRFTIESDVIHGEKIGRTL 206
               +        E +V   +K    +
Sbjct: 283 YLMRNFARGATRKELNVSWLKKNELEI 309


>gi|330502524|ref|YP_004379393.1| NAD metabolism ATPase/kinase-like protein [Pseudomonas mendocina
           NK-01]
 gi|328916811|gb|AEB57642.1| NAD metabolism ATPase/kinase-like protein [Pseudomonas mendocina
           NK-01]
          Length = 345

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 12/177 (6%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +G F  +HLGH  +++QA          VL     P   +    P    +   ++   
Sbjct: 9   LVVGKFAPLHLGHEWLIQQAQAQCEQ---VVLLSWARPE--LAGCEPERRANWLRLRFPE 63

Query: 82  LEKMGF--SALIRYK-FTLETANYSAEQFIQKVLVEWLEVKTV-ITGT--KFRFGKDRAG 135
           L         +I  +   L       E        E++    + + G      F  +  G
Sbjct: 64  LRSWVVTPEWVIAQRQAGLRLPELPHESEADAAQREFVAAFCLAVLGQPVDAVFTSEAYG 123

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTI 192
           D G        +      ++  R  +   +S++ +R  +       A  + G     
Sbjct: 124 D-GFAVHLTACFQRPVAHVEVDRARQQVPISATRLRADIHGLRHYLAPAVYGDFVER 179


>gi|167470360|ref|ZP_02335064.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis FV-1]
          Length = 293

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + +  ++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKAFMNEKGIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPRYREQLGIETILIDPQRSF--MNISGRQIRR 213


>gi|308062182|gb|ADO04070.1| ADP-heptose synthase [Helicobacter pylori Cuz20]
          Length = 463

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L  H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLERHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|78066405|ref|YP_369174.1| cytidyltransferase-related [Burkholderia sp. 383]
 gi|77967150|gb|ABB08530.1| Cytidyltransferase-related protein [Burkholderia sp. 383]
          Length = 143

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 24/155 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  +L QA +  +     V+S +     ++     +    P + +  I+  
Sbjct: 9   GAYDLFHIGHLNLLRQAKQQCDFLIAGVVSDD-----VLAVHKGVMPTIPLAERLAIVRS 63

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                    +F    A   A    +  + + L+   +  G  ++         G  +   
Sbjct: 64  --------IRFVD--AAVPAMTNDKVEIWKTLQFHVLFKGDDWQ---------GTEKGTK 104

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
            +  F  + +D +        SSS +R  L +  +
Sbjct: 105 LERDFAALGVDVVYFQYCSATSSSELRRTLREFDI 139


>gi|322373582|ref|ZP_08048118.1| pantetheine-phosphate adenylyltransferase [Streptococcus sp. C150]
 gi|321278624|gb|EFX55693.1| pantetheine-phosphate adenylyltransferase [Streptococcus sp. C150]
          Length = 165

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 21/150 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  I+ +A K+ +   I +             +   F     + +++IL++
Sbjct: 9   GSFDPITNGHMDIIARASKLFDELYIGL---------FYNKNKQGFW--DVATRKRILDE 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                 +   F       +A   +   +   L V  ++ G +     D   +        
Sbjct: 58  ------VVVDF-PNVKVITAHDSLAVDVARDLGVTYLVRGLRNATDFDYEANMDY---FN 107

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +        +  + +++   VSSS +R  +
Sbjct: 108 KGLAPELETVYLIASHEVTPVSSSRVRELI 137


>gi|307611539|emb|CBX01217.1| hypothetical protein LPW_29151 [Legionella pneumophila 130b]
          Length = 252

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEI-----NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+       N   P+   G    +GN   +H GH  +    +  +  +  TV S 
Sbjct: 1  MQIFHNLNEWIRFRNSLSPDLSLGFAPTMGN---LHAGHASLF---LASSKENHYTVSSL 54

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P                    +++ + G    I 
Sbjct: 55 FVNPTQFNNPDDYKHYPRTVDADLELMTQNGVDFCIL 91


>gi|288918267|ref|ZP_06412621.1| rfaE bifunctional protein [Frankia sp. EUN1f]
 gi|288350304|gb|EFC84527.1| rfaE bifunctional protein [Frankia sp. EUN1f]
          Length = 518

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 19/87 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           V+  G FD +H GH   L  A    +      NS   V       R +     P+   + 
Sbjct: 377 VLTNGCFDVLHRGHIAYLAAARAFGDILIVGVNSDAGV-------RRLKGPERPV---NA 426

Query: 75  PSIQEKILEKM-GFSALIRYKFTLETA 100
              +  +L  +     L+   F  +TA
Sbjct: 427 LEDRLAVLTALTDVDHLVV--FDEDTA 451


>gi|312793410|ref|YP_004026333.1| hypothetical protein Calkr_1212 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180550|gb|ADQ40720.1| protein of unknown function DUF795 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 400

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  ++ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFIVFGSEC-------GDIDKLKETAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|302680731|ref|XP_003030047.1| hypothetical protein SCHCODRAFT_82656 [Schizophyllum commune H4-8]
 gi|300103738|gb|EFI95144.1| hypothetical protein SCHCODRAFT_82656 [Schizophyllum commune H4-8]
          Length = 572

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 10/109 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     +   +   + E I++K   G 
Sbjct: 203 MHRAHREL---TVRAARQRQANVLI---HPVVGLTKPGDVDHYTRVRVYEAIMQKYPNGM 256

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG 135
             L      +  A    E     ++ +       I G      GK+  G
Sbjct: 257 GHLALLPLAMRMAG-PREAVWHAIIRKNYGCTHFIVGRDHAGPGKNSQG 304


>gi|295792727|gb|ADG29290.1| putative glycerol-3-phosphate cytidyltransferase [Paenibacillus
           alvei]
          Length = 139

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 56/154 (36%), Gaps = 29/154 (18%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G +D  H+GH  +L+ A  + +   + V + +      + S     ++ P + + +I+
Sbjct: 6   TSGVYDLFHIGHLNLLKNASALCDRLVVGVSTDD------LVSYKHKKSVIPFNERMEIV 59

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGIL 140
             +    A+I             ++ + K+ V   ++   +  G  +             
Sbjct: 60  RSIKYVDAVI------------PQETLDKMEVWRKIKFDVIFVGDDWY---------ENN 98

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           + +  +  F  V +  +    ++  SS+ +   L
Sbjct: 99  RWKEYEQQFQEVGVKIIYFPYTKGTSSTLLNETL 132


>gi|288559823|ref|YP_003423309.1| cytidyltransferase-related domain-containing protein
          [Methanobrevibacter ruminantium M1]
 gi|288542533|gb|ADC46417.1| cytidyltransferase-related domain-containing protein
          [Methanobrevibacter ruminantium M1]
          Length = 432

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 27 FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
          FD +H GH  ++++  +IA      ++ +         S++     +P   + ++ + +G
Sbjct: 8  FDPVHKGHEQLIKKGKEIAEEKNSKLVIY----LNKGYSANHAPFFTPFDARCRMAKALG 63

Query: 87 FSALI 91
             ++
Sbjct: 64 ADEVV 68


>gi|229014446|ref|ZP_04171564.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides DSM
           2048]
 gi|228746796|gb|EEL96681.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus mycoides DSM
           2048]
          Length = 131

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 37/159 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   + V S                +      ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKDLGDYLIVAVSSDE------FNKLKNKKSYHSYENRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLE--VKTVITGTKFRFGKDRAGDR 137
           ILE +     +I             E   ++ + + +   V T + G  +       G+ 
Sbjct: 58  ILEAVRYVDEVI------------PEHNWEQKVKDVVNHDVDTFVMGDDW------EGEF 99

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             L +  E           +   ++  +S++ I+  L +
Sbjct: 100 DELSEYCEV----------VYLTRTAGISTTKIKKELVQ 128


>gi|219564306|dbj|BAH03724.1| ATP sulfurylase [Saccharomyces pastorianus]
 gi|219564314|dbj|BAH03730.1| ATP sulfurylase [Saccharomyces pastorianus]
          Length = 511

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 200 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 253

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      G +  G         + 
Sbjct: 254 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGSNSKGVDFYGPYDAQE 312

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 313 LVESYKHELDIEVV 326


>gi|171179|gb|AAA91962.1| cholinephosphate cytidylyltransferase [Saccharomyces cerevisiae]
          Length = 424

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
           +LP   +  + A G FD  HLGH   LEQ  K   N  + V
Sbjct: 97  NLPPTDRPIIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIV 137


>gi|207343901|gb|EDZ71218.1| YJR010Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 300

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A  +   VL    HP   +     I   +   + ++I+++   G 
Sbjct: 101 MHRAHREL---TVRAAREANAKVLI---HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGI 154

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG--------DRG 138
           + L      +  +    E     ++ +       I G      GK+  G         + 
Sbjct: 155 AFLSLLPLAMRMSG-DREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQE 213

Query: 139 ILQKRGEKYGFHTV 152
           +++    +     V
Sbjct: 214 LVESYKHELDIEVV 227


>gi|188527297|ref|YP_001909984.1| ADP-heptose synthase [Helicobacter pylori Shi470]
 gi|226702248|sp|B2USX2|HLDE_HELPS RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|188143537|gb|ACD47954.1| ADP-heptose synthase [Helicobacter pylori Shi470]
          Length = 463

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L +H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|158706115|sp|Q5P9T3|PANC_ANAMM RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
          Length = 277

 Score = 37.1 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 64/218 (29%), Gaps = 45/218 (20%)

Query: 1   MHVFHNIE----INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
           M +  ++E    + +   N   G V  +G    +H GH   L    ++  ++ + ++S  
Sbjct: 1   MEIVRDVESVRAVLRPFTNRKIGLVPTMG---ALHSGH---LSLVHEMKKHADVVIVSIF 54

Query: 57  PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRY-----------------KFTLET 99
            +P                 +  +     G   +                        E 
Sbjct: 55  VNPLQFSPGEDYEKYPRCEEVDCEKCASAGVDVVYIPSAEGMYPDGFSTSVDIGPMAREL 114

Query: 100 ANYSAEQFIQKVLVEWL------EVKTVITGT-KFRFGKDRAGDRGILQKRGEKYGFHTV 152
              S + FI  ++V  +          +I G   ++          + ++          
Sbjct: 115 CGASRQNFINGIMVVLIKLVMQTNAHCMILGEKDYQM-------LHLTRQLFRDLNIGVD 167

Query: 153 FID--ELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGY 188
            +    +R+ +   +SS +    L+   +  A  L G+
Sbjct: 168 VLQGNTVRSAEGLALSSRH--QYLSSAEITKANFLYGF 203


>gi|161869805|ref|YP_001598973.1| pantoate--beta-alanine ligase [Neisseria meningitidis 053442]
 gi|161595358|gb|ABX73018.1| pantoate--beta-alanine ligase [Neisseria meningitidis 053442]
          Length = 253

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 56/183 (30%), Gaps = 28/183 (15%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           +GN   +H GH  ++ +A K A+     V+S   +     Q                 LE
Sbjct: 1   MGN---LHEGHLALVREAKKRAD---SVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLE 54

Query: 84  KMGFSAL-----------IRYKFTLETANYSAEQFIQKVLVEWLEVKTVI------TGTK 126
             G + +           +  ++ +E  N   E   +     +  V TV+          
Sbjct: 55  AEGVAVVFAPDEKELYPNVEQRYNVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPD 114

Query: 127 -FRFGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGHVLNAA 183
              FGK       +++   E   F      +D  R      +SS N    L+      A 
Sbjct: 115 VACFGKKDYQQLAVIKGLTEDLNFDVEIVPVDTGRAEDGLALSSRN--QYLSAAERDEAP 172

Query: 184 HLL 186
            L 
Sbjct: 173 RLY 175


>gi|313157621|gb|EFR57036.1| pantoate--beta-alanine ligase [Alistipes sp. HGB5]
          Length = 287

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 1  MHVFHNI-EINQSLPNHLK---GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
          M +F ++ E+   L    +   G V  +G    +H GH  ++E+A      +   V+S  
Sbjct: 10 MKIFTSVKELRAELETAEQSGIGFVPTMG---ALHAGHRSLVERAR---RENATVVVSVF 63

Query: 57 PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
           +P      +        P    ++LE+ G   ++ 
Sbjct: 64 VNPTQFNDKNDLRHYPRTPEADARLLERAGADFVLM 99


>gi|119961074|ref|YP_945945.1| rfaE bifunctional protein [Arthrobacter aurescens TC1]
 gi|119947933|gb|ABM06844.1| rfaE bifunctional protein [Arthrobacter aurescens TC1]
          Length = 469

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 18  KGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPS 76
            G VVA G  FD +H GH   L  A  + +   I  L+ +   R +  +  P   +    
Sbjct: 333 GGTVVATGGCFDLLHAGHARTLAAARSMGD-CLIVCLNSDESVRRLKGAHRP---IVSVE 388

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYS---AEQFIQ--KVLVEWLEVKTVITG 124
            + ++L  +    A++ +      A  S    + +++      + L    ++ G
Sbjct: 389 DRAELLLALECVDAVVVFGEDTPEACLSEIRPDIWVKGGDYTPQELPEARLVAG 442


>gi|327482477|gb|AEA85787.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas stutzeri DSM 4166]
          Length = 473

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 58/178 (32%), Gaps = 27/178 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M V   +   +      +  V   G FD +H GH   LEQA    +   +  ++ +    
Sbjct: 322 MTVEQLLTAVEDARAEGEKIVFTNGCFDILHAGHVTYLEQARAQGDRL-VVAVNDDGSVS 380

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            +     P   ++    +  +L  +     ++        +  + E  + +V        
Sbjct: 381 RLKGPGRP---INSVDRRMAVLAGLEAVDWVVC------FSEDTPENLLAQV-----RPD 426

Query: 120 TVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            ++ G  +  G D+     +++  G       V +  L  N     S++ I   +   
Sbjct: 427 VLVKGGDY--GVDQVVGADLVKAYG-----GVVKVLGLVENS----STTAIVEKIRSR 473


>gi|163748882|ref|ZP_02156134.1| ADP-heptose synthase [Shewanella benthica KT99]
 gi|161331656|gb|EDQ02461.1| ADP-heptose synthase [Shewanella benthica KT99]
          Length = 476

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 59/161 (36%), Gaps = 27/161 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H GH   L++A    +   + V   +   R  ++       ++P   
Sbjct: 341 ERVVMTNGCFDILHAGHVSYLQEAKAQGDRLIVAVNDDDSVKR--LKGDGRP--INPLDR 396

Query: 78  QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  +L  +     ++   F+ +    + ++ I  +L   L     + G  ++  +D AG 
Sbjct: 397 RMAVLAGLASVDWVV--PFSED----TPQRIISHLLPNML-----VKGGDYQI-EDIAGG 444

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           + ++           V +          +S++ I   +   
Sbjct: 445 KEVIAA------GGVVKVLCFEEG----ISTTKIIENIMAK 475


>gi|118356113|ref|XP_001011315.1| cytidyltransferase-related domain containing protein [Tetrahymena
           thermophila]
 gi|89293082|gb|EAR91070.1| cytidyltransferase-related domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 467

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 41/148 (27%), Gaps = 29/148 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH   + QA ++     + V+S       +I+   P         +  I   
Sbjct: 90  GVFDLTHSGHFNAIRQAKQLCEILVLGVVS----TEEVIKRKGPPVL--TYEERVGIARA 143

Query: 85  MG-FSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                 +     +                L++ L    V  G       D        + 
Sbjct: 144 CKWVDEIYENAPYDPSI-----------ELLDKLNCSHVAHGDDLILLPDGTDSYQAFRN 192

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNI 170
                 F           +++ +S+++I
Sbjct: 193 VNRFLTFK----------RTEGISTTDI 210


>gi|54298652|ref|YP_125021.1| hypothetical protein lpp2716 [Legionella pneumophila str. Paris]
 gi|81601656|sp|Q5X1M7|PANC_LEGPA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|53752437|emb|CAH13869.1| hypothetical protein lpp2716 [Legionella pneumophila str. Paris]
          Length = 252

 Score = 37.1 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEI-----NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+       N   P+   G    +GN   +H GH  +    +  +  +  TV S 
Sbjct: 1  MQIFHNLNEWIRFRNSLSPDLSLGFAPTMGN---LHAGHASLF---LASSKENHYTVSSL 54

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P                    +++ + G    I 
Sbjct: 55 FVNPTQFNNPDDYKHYPRTVDADLELMTQNGVDFCIL 91


>gi|218781324|ref|YP_002432642.1| cytidyltransferase-related domain protein [Desulfatibacillum
          alkenivorans AK-01]
 gi|218762708|gb|ACL05174.1| cytidyltransferase-related domain protein [Desulfatibacillum
          alkenivorans AK-01]
          Length = 342

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 17 LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVL 53
          +K   + +G F   H GH  ++E A +  +   I V 
Sbjct: 1  MKKTGLTLGKFAPFHKGHQFLIETAFREVDELMILVY 37


>gi|163854833|ref|YP_001629131.1| pantoate--beta-alanine ligase [Bordetella petrii DSM 12804]
 gi|229485642|sp|A9I1G8|PANC_BORPD RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|163258561|emb|CAP40860.1| pantoate--beta-alanine ligase [Bordetella petrii]
          Length = 280

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 39/228 (17%)

Query: 1   MHVFHNIEINQSLPNHLKGG-----VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M V H I   Q L +HL+G      V  +GN   +H GH  +++ A +  +  P+    F
Sbjct: 1   MKVVHTI---QELRDHLRGQNRVSFVPTMGN---LHEGHLALMKLARQ--HGDPVVASIF 52

Query: 56  NPHPRTIIQSSSPIFTL-SPPSIQEKILEKMGFSALIRYKFTLET-------ANYSAEQF 107
               R     +              + LEK     ++      E             +  
Sbjct: 53  VN--RLQFGPNEDFDRYPRTLRDDIEKLEKARDVYVLFAPDEREMYPEPQNYRVQPPDDL 110

Query: 108 IQKVLVEWL-----EVKTVITGTKFR-------FGKDRAGDRGILQKRGEKYGFHTVFI- 154
              +  E+       V TV+             FGK       I++    ++      + 
Sbjct: 111 GDILEGEFRPGFFGGVSTVVLKLLSCVQPRVAVFGKKDYQQLMIVRNMCRQFQLPVDIVA 170

Query: 155 -DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEK 201
            + +R +    +SS N    L+      A  L     ++   V  G +
Sbjct: 171 HETVRADDGLALSSRN--RYLSPAERAEAPALYQALQSLRQQVAAGAR 216


>gi|296113869|ref|YP_003627807.1| putative cytidyltransferase protein [Moraxella catarrhalis RH4]
 gi|295921563|gb|ADG61914.1| putative cytidyltransferase protein [Moraxella catarrhalis RH4]
 gi|326560550|gb|EGE10931.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis 103P14B1]
 gi|326561420|gb|EGE11770.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis 46P47B1]
 gi|326567148|gb|EGE17270.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis BC1]
 gi|326574922|gb|EGE24852.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis 101P30B1]
          Length = 342

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 25/156 (16%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT----LSPPSIQE 79
           IG F+  H GHH ++ QA+  A    I ++     PRTI     P       L+    + 
Sbjct: 13  IGRFEPFHQGHHYVITQALAHARQV-IVLMGSANSPRTIKNPFRPDERQAMILNSFDKKN 71

Query: 80  K-ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +  +G   A               +  I  +       +  I G        +    
Sbjct: 72  RERIHCLGINDATY----NDNKWLIEVQNAIVSITANTPNERIGIIGHD------KDESS 121

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L    +   F             + +S++ IR A
Sbjct: 122 YYLALFPQYKTFMV--------KNFEYISATPIREA 149


>gi|290983415|ref|XP_002674424.1| predicted protein [Naegleria gruberi]
 gi|284088014|gb|EFC41680.1| predicted protein [Naegleria gruberi]
          Length = 349

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 3   VFHNIEINQSLPNHLKG-GVVAIG-NFDGIHLGHHLILEQAIKIANN 47
           +F+N ++  S+  + +   VV +G  FD +HLGH ++L QA+ +   
Sbjct: 163 IFNNSQVISSVEENYRKFNVVCLGGTFDRLHLGHKILLTQALLLYKE 209


>gi|271500793|ref|YP_003333818.1| citrate lyase ligase [Dickeya dadantii Ech586]
 gi|270344348|gb|ACZ77113.1| citrate lyase ligase [Dickeya dadantii Ech586]
          Length = 349

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 14/176 (7%)

Query: 32  LGHHLILEQAIKIANNSPITVL----SFNPHPRT---IIQSSSPIFTLSPPSIQEKILEK 84
           LGH  + EQA +  +   I V+    SF P       + Q  + I  L+  +  E ++ K
Sbjct: 164 LGHRYLAEQAARACDWLHIFVVREDVSFFPFAERLEMVRQGVADIPNLTVHAGSEYLISK 223

Query: 85  MGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             F      + +L +  ++A   I  ++ +   L +     GT+         ++ +   
Sbjct: 224 ATFPGYFLKEESLISQAHAALDLIIFRQYIAPALGITRRFVGTEPFCPVTHQYNQDMHHW 283

Query: 143 RGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             +           V I+  R +  Q +S+S +R  L +        ++       
Sbjct: 284 LEQDGRVPAPALTVVEIERTREHDGQAISASAVRRLLRQRQFDAIRQIVPATTFAH 339


>gi|238761610|ref|ZP_04622585.1| Pantothenate synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700124|gb|EEP92866.1| Pantothenate synthetase [Yersinia kristensenii ATCC 33638]
          Length = 284

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 66/224 (29%), Gaps = 37/224 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++E A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHEGHMTLVEDAKTRAD---VVVVSIFVNPLQFERPDDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK---------------- 126
            + G   +    F    A+        +  V+   + T++ G                  
Sbjct: 83  TRHGVDLV----FAPAAADVYPAGLDSQTYVDVPALSTILEGASRPGHFRGVSTIVSKLF 138

Query: 127 -------FRFGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSSSNIRTALTKG 177
                    FG+       +++K     G+    + +  +R      +SS N    LT  
Sbjct: 139 NLVQPDVACFGEKDYQQLALIRKMVADMGYDINIIGVPIVRAKDGLALSSRN--GYLTAE 196

Query: 178 HVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILL 221
               A  L      +   +  GE+    L   TA    +     
Sbjct: 197 ERKIAPQLYKIMQALAEKLAMGERQIDELLADTAEQLRNAGFTP 240


>gi|163854791|ref|YP_001629089.1| putative sugar nucleotidyltransferase [Bordetella petrii DSM 12804]
 gi|163258519|emb|CAP40818.1| putative sugar nucleotidyltransferase [Bordetella petrii]
          Length = 161

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 42/112 (37%), Gaps = 13/112 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L+QA ++  +  + + + +   R + + S     L+    
Sbjct: 27  RPLVFTNGVFDILHRGHATYLDQAAQLGASLVVAINT-DDSVRRLGKGSDRP--LNRQED 83

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
           +  +L  +G  + +           +  +     ++  L    ++ G  +  
Sbjct: 84  RAALLAALGCVSAVTL-----FHEDTPVE-----IIGELRPDLIVKGGDYDM 125


>gi|326781948|ref|YP_004322350.1| putative nucleotidyltransferase [Synechococcus phage S-SM2]
 gi|310003138|gb|ADO97536.1| putative nucleotidyltransferase [Synechococcus phage S-SM2]
          Length = 140

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 55/161 (34%), Gaps = 30/161 (18%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V   G FD +H GH  + + A  + +   + V +       +         ++    ++
Sbjct: 3   TVWTNGCFDILHPGHIELFKVAKSLGDRLIVGVDTD----LKVKADKGANRPINNLEYRK 58

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +LE +      I   F        + Q +++  ++      ++ G  +     R GD  
Sbjct: 59  AMLESIRYID--IVLPFG-------SRQELEQ-SIQLYRPDVLLVGGDW-----RNGDVV 103

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
             +   E   F          N+    SS+N+  ++   ++
Sbjct: 104 GREFAKEVRFF----------NRVGGYSSTNVIDSIANKYI 134


>gi|209524228|ref|ZP_03272778.1| pantoate/beta-alanine ligase [Arthrospira maxima CS-328]
 gi|209495319|gb|EDZ95624.1| pantoate/beta-alanine ligase [Arthrospira maxima CS-328]
          Length = 524

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 10/95 (10%)

Query: 1  MHVFHNIEINQSLPNHLK----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
          M +F  +   +S          G V  +G   G+H GH  ++ QA    N S + V+S  
Sbjct: 1  MRLFTTVAAWRSYSQACHNRQIGLVPTMG---GLHSGHLSLIRQAR---NGSDLVVVSIF 54

Query: 57 PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           +P                     +  + G   + 
Sbjct: 55 VNPLQFGPREDFQKYPRNLEADLALGRENGVDVVF 89


>gi|168056705|ref|XP_001780359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668201|gb|EDQ54813.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 393

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 31/160 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P         +  ++  
Sbjct: 37  GCFDMMHYGHANALRQARVLGDELVVGVISDE----EIKANKGPPV--MSMDERVVMVSS 90

Query: 85  MG-FSALIR---YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I+   Y+   E  N    ++         ++  +I G       D +      
Sbjct: 91  VKWVDEVIQDAPYEINAEFMNKLFTEY---------KIDYIIHGDDPCLLPDGSDAYAHA 141

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
           +K G                +++ VSS++I  R  L    
Sbjct: 142 KKAGRYKQIK----------RTEGVSSTDIVGRMLLCVRD 171


>gi|148272535|ref|YP_001222096.1| phosphopantetheine adenylyltransferase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|166216536|sp|A5CQP6|COAD_CLAM3 RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|147830465|emb|CAN01400.1| coaD [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 163

 Score = 37.1 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 19/152 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD + LGH  ++ +A ++ +   + V         +           P   +  
Sbjct: 5   AVVPGSFDPVTLGHLDVIRRAARLYDELVVLV---------VHNPGKTPML--PLGERVA 53

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           ++E++   A +    T+   ++ A   +       +    ++ G + +            
Sbjct: 54  LIERVIRDAGL--PDTVRVDSWGAGLLVD--YCRQVGATVLVKGVRSQLDV----TYETP 105

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                +       +  L +     VSSS +R 
Sbjct: 106 MALVNRDLADVETVLLLPDPAHAHVSSSLVRQ 137


>gi|271501091|ref|YP_003334116.1| citrate lyase ligase [Dickeya dadantii Ech586]
 gi|270344646|gb|ACZ77411.1| citrate lyase ligase [Dickeya dadantii Ech586]
          Length = 349

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 14/176 (7%)

Query: 32  LGHHLILEQAIKIANNSPITVL----SFNPHPRT---IIQSSSPIFTLSPPSIQEKILEK 84
           LGH  + EQA +  +   I V+    SF P       + Q  + I  L+  +  E ++ K
Sbjct: 164 LGHRYLAEQAARACDWLHIFVVREDVSFFPFAERLEMVRQGVADIPNLTVHAGSEYLISK 223

Query: 85  MGFSALIRYKFTLETANYSAEQFI--QKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
             F      + +L +  ++A   I  ++ +   L +     GT+         ++ +   
Sbjct: 224 ATFPGYFLKEESLISQAHAALDLIIFRQYIAPALGITRRFVGTEPFCPVTHQYNQDMHHW 283

Query: 143 RGEKYGF-----HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
             +           V I+  R +  Q +S+S +R  L +        ++       
Sbjct: 284 LEQDGRVPAPALTVVEIERTREHDGQAISASAVRRLLRQRQFDAIRQIVPATTFAH 339


>gi|229918729|ref|YP_002887375.1| pantoate--beta-alanine ligase [Exiguobacterium sp. AT1b]
 gi|259515844|sp|C4L6Q1|PANC_EXISA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|229470158|gb|ACQ71930.1| pantoate/beta-alanine ligase [Exiguobacterium sp. AT1b]
          Length = 276

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 21/140 (15%)

Query: 1   MHVFHNIE-INQSLP-NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M +   +E +  +LP +   G V  +G    +H GH  ++E A +  +   + V+S   +
Sbjct: 1   MRIVSTVEELRSALPMDQTIGFVPTMGY---LHEGHMSLVENARREND---VVVMSIFVN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           P     +             EK+  + G   ++ Y  T           + +V V     
Sbjct: 55  PTQFGPNEDLDRYPRDFERDEKLAREAGVD-VLFYPTTETMYPLD----MARVTVRH--- 106

Query: 119 KTVITGTKFRFGKDRAGDRG 138
                G     G  R G   
Sbjct: 107 -----GADVLCGASRPGHFD 121


>gi|195953205|ref|YP_002121495.1| pantoate/beta-alanine ligase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932817|gb|ACG57517.1| pantoate/beta-alanine ligase [Hydrogenobaculum sp. Y04AAS1]
          Length = 279

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 82/260 (31%), Gaps = 47/260 (18%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGI------HLGHHLILEQAIKIANNSPITVLS 54
           M +  ++E  ++  N  K     IG    +      H GH  +++ +  + +   ITV+S
Sbjct: 4   MDICKDVECVRAFVNIRKQQSKTIGF---VPTMGYLHEGHMSLVKASKSMCD---ITVVS 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P+                   K+LE+     +    F  +      E F   + + 
Sbjct: 58  IFVNPKQFGPKEDYSKYPRNLERDLKLLEEAKVDMV----FIPDVDTIYPEGFSTTINIG 113

Query: 115 WL--------------EVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYG--FHT 151
            L               V TV+             FG+       I+QK  +        
Sbjct: 114 PLANVLEGAFRPGHFDGVCTVVTKLFNIVKPNKAFFGEKDYQQLKIIQKLVKDLNLDIEI 173

Query: 152 VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGFPTA 211
           V I   R      +SS N  T L +     A  +  +    +    +G K    +     
Sbjct: 174 VPIPTKREEDGLAMSSRN--TYLNEEQRERANTIYKFLLKAKEAFENGIKDTDKI----- 226

Query: 212 NMQLSPDILLKEGVYAIRFR 231
            ++ +  +L  + VY I+  
Sbjct: 227 -IEYAKAVLDVDVVYYIKIV 245


>gi|152991190|ref|YP_001356912.1| ADP-heptose synthase [Nitratiruptor sp. SB155-2]
 gi|189028290|sp|A6Q4Z6|HLDE_NITSB RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|151423051|dbj|BAF70555.1| ADP-heptose synthase [Nitratiruptor sp. SB155-2]
          Length = 462

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 20/105 (19%)

Query: 1   MHVFHNIE-INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           +  F  IE I++ L    K  V   G FD +HLGH   L++A ++ +   + V       
Sbjct: 314 IKDFEEIELISKDLHKRGKRIVFTNGCFDILHLGHVKYLQKAKELGDVLIVGV------- 366

Query: 60  RTIIQSSSPIFTL-------SPPSIQEKILEKMG-FSALIRYKFT 96
                S + +  L       +P   +  +L  +     ++ ++  
Sbjct: 367 ----NSDASVKRLKGDDRPINPQFDRAYLLASLEAVDYVVIFEED 407


>gi|158931131|sp|Q6G456|PANC_BARHE RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
          Length = 284

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 70/218 (32%), Gaps = 46/218 (21%)

Query: 1   MHVFHNI-EINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I E+ QS+    +     G V  +G    +H GH  ++ +A  + +     ++S
Sbjct: 1   MRVLKTIPEVRQSITEERRLGFSIGLVPTMG---ALHNGHIALVRRARAMCDR---VLVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQ--EKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
              +P+         F   P  ++    +LE+ G   L    FT              V 
Sbjct: 55  IFVNPKQ-FGPDED-FDKYPRDLKGDCALLEEAGVEYL----FTPSVEEMWPPGNETIVN 108

Query: 113 VEWL--------------EVKTVI------TGTKFRFGKDRAGDRGILQKRGEK---YGF 149
           VE L               V +V+            F  ++   + ++ +R  +   +  
Sbjct: 109 VEKLSRMLIGKLRPGHFCGVTSVVAKLFNIVQPDKAFFGEKDFQQILIVRRMVEDLAFPI 168

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             V +  LR       SS   R          AA ++ 
Sbjct: 169 EVVGVPVLREADGVASSS---RNQFLTLEDRKAAKIIP 203


>gi|49475307|ref|YP_033348.1| pantoate-beta-alanine ligase [Bartonella henselae str. Houston-1]
 gi|49238113|emb|CAF27320.1| Pantoate-beta-alanine ligase [Bartonella henselae str. Houston-1]
          Length = 286

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 70/218 (32%), Gaps = 46/218 (21%)

Query: 1   MHVFHNI-EINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I E+ QS+    +     G V  +G    +H GH  ++ +A  + +     ++S
Sbjct: 3   MRVLKTIPEVRQSITEERRLGFSIGLVPTMG---ALHNGHIALVRRARAMCDR---VLVS 56

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQ--EKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
              +P+         F   P  ++    +LE+ G   L    FT              V 
Sbjct: 57  IFVNPKQ-FGPDED-FDKYPRDLKGDCALLEEAGVEYL----FTPSVEEMWPPGNETIVN 110

Query: 113 VEWL--------------EVKTVI------TGTKFRFGKDRAGDRGILQKRGEK---YGF 149
           VE L               V +V+            F  ++   + ++ +R  +   +  
Sbjct: 111 VEKLSRMLIGKLRPGHFCGVTSVVAKLFNIVQPDKAFFGEKDFQQILIVRRMVEDLAFPI 170

Query: 150 HTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLG 187
             V +  LR       SS   R          AA ++ 
Sbjct: 171 EVVGVPVLREADGVASSS---RNQFLTLEDRKAAKIIP 205


>gi|46136979|ref|XP_390181.1| hypothetical protein FG10005.1 [Gibberella zeae PH-1]
          Length = 432

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 38/194 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNP--HPRTIIQSSSPIFTLSPPSI 77
           V A G FD  HLGH   LEQA K   ++ + V ++ +   H R          T+   + 
Sbjct: 144 VYADGVFDLFHLGHMRQLEQAKKAFPDTTLVVGVTGDHETHKR-------KGLTVMSAAE 196

Query: 78  QEKILEKMG-FSALIR-YKF--TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           + + L        +I    +  T E  + +   ++                    +G D 
Sbjct: 197 RAETLRHCKWVDEVIEDCPWVVTPEFLDENKLDYVAH--------------DDLPYGADE 242

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTKGHVLNAAHLLGYRFTI 192
             D     K   K+         L   +++ VS++  I   +       A          
Sbjct: 243 GDDIYQPIKAAGKF---------LVTQRTEGVSTTGLITRIVRDYEKYIARQFKRGTSRQ 293

Query: 193 ESDVIHGEKIGRTL 206
           E +V   +K    L
Sbjct: 294 ELNVSWLKKNELDL 307


>gi|307720451|ref|YP_003891591.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Sulfurimonas autotrophica DSM 16294]
 gi|306978544|gb|ADN08579.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Sulfurimonas autotrophica DSM 16294]
          Length = 190

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 21/165 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVL-SFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           G+FD  HL H  I++   ++     + V+ +F       +      FT +P  ++ + L+
Sbjct: 9   GSFDPPHLAHEAIVKALRELDFIDKVVVMPTF-------LNPFKETFT-APAELRLQWLK 60

Query: 84  KM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
            +   +  +    + ++           K L+   +   +I G        +      L+
Sbjct: 61  DIFSSYEDVQVSSYEVDLKKKVPTIETVKYLLNSYDKVYLIIGADNLKSLHQWYKFDALK 120

Query: 142 KRGEKYGFHTVFIDE-------LRNNKSQIVSSSNIRTALTKGHV 179
           +      F  V  DE       +R +  + +SSS++R       +
Sbjct: 121 RVV---TFIVVTRDEIAIPKNFIRLDLHEDISSSDLRKNFDSLKI 162


>gi|254457295|ref|ZP_05070723.1| nicotinate-nucleotide adenylyltransferase [Campylobacterales
           bacterium GD 1]
 gi|207086087|gb|EDZ63371.1| nicotinate-nucleotide adenylyltransferase [Campylobacterales
           bacterium GD 1]
          Length = 180

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 31/170 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  H+ H  I+   + I     + V+     P T +         +P  ++ K L +
Sbjct: 9   GSFDPPHIAHEAIVRALLNIKEIDKVIVM-----P-TYLNPFKSQSY-APSELRLKWLRE 61

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL-- 140
           +   +  +    F +  A         K L++  +   +  G           +   L  
Sbjct: 62  IFSDYKNVEISDFEVSKAEKVPTIESVKYLLKTYKKIYLTIGAD---------NLETLHK 112

Query: 141 ----QKRGEKYGFHTVFIDELRNNKS-------QIVSSSNIRTALTKGHV 179
               ++  E   F     + L   K          +SS+ +R  + K  +
Sbjct: 113 WTDYRELKELVTFIVASRESLEIPKGFMKLSVDVDISSTTLRQKIDKRKL 162


>gi|197321138|gb|ACH68642.1| pantoate-beta-alanine ligase [Kosmotoga olearia TBF 19.5.1]
          Length = 291

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 35/188 (18%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I I+        G V  +G    +H GH  ++ QA    +N  +TV  F    +     +
Sbjct: 16  IAIDIEREEKSHGFVPTMGY---LHEGHLSLVRQAR--MDNVVVTVSIFVNPTQ--FGPN 68

Query: 67  SPIFTLSPPSIQ-EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------- 116
                      +   +L  +    +    F  +  +   + +   V+VE L         
Sbjct: 69  EDYDRYPRDEERDLSLLRDLDVDYV----FIPKVEDMYPDNYSTYVIVEDLTDVLCGARR 124

Query: 117 --EVKTV--ITGTKF--------RFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKS 162
               K V  I    F         FG+  A    +L++      F    V +  +R    
Sbjct: 125 PGHFKGVATIVAKLFNIVRPTKAYFGQKDAQQFRVLKRMARDLNFPVELVEMPIVREKDG 184

Query: 163 QIVSSSNI 170
             +SS N+
Sbjct: 185 LAMSSRNV 192


>gi|124026745|ref|YP_001015860.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. NATL1A]
 gi|189036397|sp|A2C536|PANCY_PROM1 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantothenate synthetase;
           Short=PS; AltName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; Includes:
           RecName: Full=Cytidylate kinase; Short=CK; AltName:
           Full=Cytidine monophosphate kinase; Short=CMP kinase
 gi|123961813|gb|ABM76596.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate
           kinase [Prochlorococcus marinus str. NATL1A]
          Length = 516

 Score = 37.1 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNS-PITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
            +G   G+H GH  ++++A +   N+  I ++S   +P    +           +   ++
Sbjct: 28  TMG---GLHPGHQYLIQKAKERKTNTNQIILVSIFVNPLQFSKGEDFKKYPRNINRDAEL 84

Query: 82  LEKMGFSALIRYKFTLET 99
               G  A+    +    
Sbjct: 85  AFSAGADAIWAPDYDEVF 102


>gi|323453830|gb|EGB09701.1| hypothetical protein AURANDRAFT_24245 [Aureococcus anophagefferens]
          Length = 128

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 16/110 (14%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            V+  G +D  H GH  I+++A+ + +   + V   +       +             + 
Sbjct: 7   TVITFGTYDLFHFGHLRIIQRAMALGDRLVVGV---SSDALNYEKKRQKPAV--CEEQRM 61

Query: 80  KILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            ++  + G S +    F  E+    A+        E      ++ G   +
Sbjct: 62  ALVAALAGVSEV----FLEESLEKKAD------YCEMYGADVLVMGDDHK 101


>gi|150397261|ref|YP_001327728.1| pantoate--beta-alanine ligase [Sinorhizobium medicae WSM419]
 gi|189036432|sp|A6UB63|PANC_SINMW RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|150028776|gb|ABR60893.1| pantoate--beta-alanine ligase [Sinorhizobium medicae WSM419]
          Length = 291

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 39/199 (19%)

Query: 1   MHVFHNI-EINQSLPNHLK-----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M     I E+  +L  H +     G V  +G    +H+GH  ++ +A    +   + V S
Sbjct: 1   MRTITTIAELRDALAEHRRAGRSVGLVPTMGY---LHVGHMELVRRARGEND---VVVAS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +          +  +++L   G   L    F    ++         V V 
Sbjct: 55  IFVNPLQFGANEDLGEYPRDLARDQELLTDGGVDIL----FAPGVSDMYPRPMETVVDVP 110

Query: 115 WLE--------------VKTVITG-------TKFRFGKDRAGDRGILQKRGE--KYGFHT 151
            L               V TV+T         +  FG+       I+++  E        
Sbjct: 111 KLGSELEGAVRPGHFAGVATVVTKLFNIVQPDRAYFGEKDFQQLQIIRRMVEDLAQPVKV 170

Query: 152 VFIDELRNNKSQIVSSSNI 170
           V +  +R       SS N+
Sbjct: 171 VGVPTVREEDGLACSSRNV 189


>gi|330872212|gb|EGH06361.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 474

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA  + +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKNVFTNGCFDILHAGHVTYLEQARALGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVISFP------EGTPENLLSHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 435 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKI 470


>gi|320333491|ref|YP_004170202.1| cytidyltransferase-like domain-containing protein [Deinococcus
          maricopensis DSM 21211]
 gi|319754780|gb|ADV66537.1| cytidyltransferase-related domain protein [Deinococcus
          maricopensis DSM 21211]
          Length = 336

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 22 VAIGNFDGIHLGHHLILEQAIKIAN 46
          + IG F  +H GH L++E+A+ + +
Sbjct: 9  LVIGKFAPLHRGHQLLIERALAVCD 33


>gi|302537034|ref|ZP_07289376.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces sp. C]
 gi|302445929|gb|EFL17745.1| glycerol-3-phosphate cytidylyltransferase [Streptomyces sp. C]
          Length = 160

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 24/152 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S       + + +     + P   + +I+  
Sbjct: 15  GAYDLFHIGHLNILRHARSRCDYLVAGVVS-----DEMAERAKGRRPMIPLVERLEIVRS 69

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +              ++      V +     +  G  +R           L++  
Sbjct: 70  --VKYV-----DAAFVETVPDKVETWKQVRF---DVIFKGDDWRGTPKG----DKLERDF 115

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             +G   V+        +   SS+ +R AL  
Sbjct: 116 AAHGVDVVYFP-----YTVHTSSTQLRRALDA 142


>gi|262369851|ref|ZP_06063178.1| pantoate-beta-alanine ligase [Acinetobacter johnsonii SH046]
 gi|262314890|gb|EEY95930.1| pantoate-beta-alanine ligase [Acinetobacter johnsonii SH046]
          Length = 280

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
          G V  +GN   +H GH  ++ +A K+ +   + V+S   +P     +             
Sbjct: 25 GFVPTMGN---LHQGHLNLVREAKKLCD---VVVVSIFVNPIQFGPNEDFDSYPRTLEQD 78

Query: 79 EKILEKMGFSALI 91
          +++L ++G   + 
Sbjct: 79 QRLLAEVGCDIVF 91


>gi|227548313|ref|ZP_03978362.1| pantoate--beta-alanine ligase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079631|gb|EEI17594.1| pantoate--beta-alanine ligase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 266

 Score = 37.1 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 23/75 (30%), Gaps = 7/75 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A +    SP+ V  F   P                S    +LE  G  A
Sbjct: 30  LHEGHLSLVRAARET--GSPVVVSIFVN-PLQFAPGEDLDAYPRTLSADVALLESEGVDA 86

Query: 90  LIRYKFTLETANYSA 104
           +    F    A    
Sbjct: 87  V----FAPSVATMYP 97


>gi|297380058|gb|ADI34945.1| ADP-heptose synthase [Helicobacter pylori v225d]
          Length = 463

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 28/132 (21%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L +H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL--EV 118
            ++       +     +  +L  +     ++           +  + IQ +  + L    
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVV------FKEDTPIKLIQALKPDILVKGA 423

Query: 119 KTV---ITGTKF 127
             +   + G++F
Sbjct: 424 DYLNKEVIGSEF 435


>gi|253578152|ref|ZP_04855424.1| glycerol-3-phosphate cytidylyltransferase [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251850470|gb|EES78428.1| glycerol-3-phosphate cytidylyltransferase [Ruminococcus sp.
           5_1_39BFAA]
          Length = 138

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 28/154 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  ++  A K  +   + V     +   +++S      + P   + +I+  
Sbjct: 10  GTFDMFHIGHLNLIRNAKKHCDYLIVGV-----NADDLVESYKNKRPIVPLEERAEIVRA 64

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ--K 142
           + +   +    TL+          +K + E +    +  G  ++      G+    +  K
Sbjct: 65  IRYVDEVIVTTTLD----------KKQVWEKVHFNEIYIGDDWK------GNARWEKTGK 108

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             E+ G   VF+       ++  SS+ +R  L +
Sbjct: 109 EMEELGAKLVFLP-----YTKDTSSTMLREKLKE 137


>gi|218131230|ref|ZP_03460034.1| hypothetical protein BACEGG_02836 [Bacteroides eggerthii DSM 20697]
 gi|217986622|gb|EEC52957.1| hypothetical protein BACEGG_02836 [Bacteroides eggerthii DSM 20697]
          Length = 427

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 25/148 (16%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM-GFS 88
           IH GH  I+ +A+K+     + VL+        I S   +  L+    + +I+  + G  
Sbjct: 6   IHTGHLNIIHEAMKLGR-VVVGVLT-----DEAIASYKRLPYLT-YEQRSEIVANLKGVD 58

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
            +I           +   ++  +  E +    V+ G  ++ G  +   R  +     ++G
Sbjct: 59  EVIP---------QTTLDYVPNL--EKVRPDYVLHGDDWKQGVQQK-TRQRVIDCISQWG 106

Query: 149 FHTVFIDELRNNKSQIVSSSNIRTALTK 176
              + I       +Q +SSS +   L +
Sbjct: 107 GKVIDIP-----YTQGISSSMLNQRLKE 129


>gi|153005437|ref|YP_001379762.1| cytidyltransferase-like protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029010|gb|ABS26778.1| cytidyltransferase-related domain [Anaeromyxobacter sp. Fw109-5]
          Length = 160

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           +A G FD  H+GH   L+ A   A+   +  ++ +   R       P   + P   + +
Sbjct: 27 ALANGVFDLFHVGHLRYLKGARAEAD-LLVVAVNSDASTRANKGPGRP---IVPEGERAE 82

Query: 81 ILEKMG-FSALIRYK 94
          I+E +G    ++ + 
Sbjct: 83 IVEALGCVDHVVLFD 97


>gi|145596486|ref|YP_001160783.1| rfaE bifunctional protein [Salinispora tropica CNB-440]
 gi|145305823|gb|ABP56405.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose
           1-phosphate adenylyltransferase [Salinispora tropica
           CNB-440]
          Length = 562

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   LEQA  + +   +  ++ +   R +  +  P+   +P   
Sbjct: 418 RSVVFTNGCFDVLHPGHVRYLEQARALGD-LLVVAVNADGSVRRLKGADRPV---NPVED 473

Query: 78  QEKILEKM-GFSALIRYKFT 96
           +  +L  +     ++ ++  
Sbjct: 474 RVALLAALTHVDHVVVFEED 493


>gi|283850307|ref|ZP_06367596.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Desulfovibrio sp. FW1012B]
 gi|283574333|gb|EFC22304.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Desulfovibrio sp. FW1012B]
          Length = 238

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G F+ +H+GH   +  AI++A    +  + F P  R   +   P+   +   ++   L  
Sbjct: 11  GTFNPVHVGH---VRAAIEVAEALGLGAVEFVPAARPPHKCGGPLLDFA-LRLRLCRLAV 66

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEV-KTVITGTKFRFGKDRAGDRGILQKR 143
            G                 AE+       E L     V  G  F F     GD   L + 
Sbjct: 67  AGIPGF-------SVNAMEAERPGPSYTCETLAALAGVRPGEDFCF-IMGMGDLLHLGQW 118

Query: 144 GEKYG 148
            E +G
Sbjct: 119 KEGFG 123


>gi|89902810|ref|YP_525281.1| bifunctional ADP-heptose synthase [Rhodoferax ferrireducens T118]
 gi|89347547|gb|ABD71750.1| RfaE bifunctional protein, domain II [Rhodoferax ferrireducens
           T118]
          Length = 170

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 13/114 (11%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH L L QA  +  +  + + + +   R +     P   L+  + 
Sbjct: 35  RPLVFTNGVFDVLHRGHVLYLAQARALGASLLVALNT-DASARRL--GKGPDRPLNNEAD 91

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
           +  ++  +  ++L+ + F  +    +    I ++  + L     + G  +   K
Sbjct: 92  RALVMAALAATSLVTW-FDED----TPLALITQIKPDIL-----VKGGDYDMSK 135


>gi|45443470|ref|NP_995009.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51594939|ref|YP_069130.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108809831|ref|YP_653747.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Antiqua]
 gi|108810480|ref|YP_646247.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Nepal516]
 gi|145600445|ref|YP_001164521.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Pestoides F]
 gi|150260518|ref|ZP_01917246.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis CA88-4125]
 gi|162418720|ref|YP_001605399.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Angola]
 gi|165927277|ref|ZP_02223109.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936463|ref|ZP_02225031.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009025|ref|ZP_02229923.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212013|ref|ZP_02238048.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400484|ref|ZP_02305993.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419163|ref|ZP_02310916.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426018|ref|ZP_02317771.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170025835|ref|YP_001722340.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|186893939|ref|YP_001871051.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|218927643|ref|YP_002345518.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis CO92]
 gi|229836975|ref|ZP_04457140.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis Pestoides A]
 gi|229840328|ref|ZP_04460487.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842408|ref|ZP_04462563.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900668|ref|ZP_04515792.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis Nepal516]
 gi|270487970|ref|ZP_06205044.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis KIM
           D27]
 gi|294502541|ref|YP_003566603.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Z176003]
 gi|45438339|gb|AAS63886.1| transcriptional regulator NadR [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588221|emb|CAH19828.1| transcriptional regulator NadR [Yersinia pseudotuberculosis IP
           32953]
 gi|108774128|gb|ABG16647.1| transcriptional regulator NadR [Yersinia pestis Nepal516]
 gi|108781744|gb|ABG15802.1| transcriptional regulator NadR [Yersinia pestis Antiqua]
 gi|115346254|emb|CAL19124.1| transcriptional regulator NadR [Yersinia pestis CO92]
 gi|145212141|gb|ABP41548.1| transcriptional regulator NadR [Yersinia pestis Pestoides F]
 gi|149289926|gb|EDM40003.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis CA88-4125]
 gi|162351535|gb|ABX85483.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Angola]
 gi|165915579|gb|EDR34188.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920739|gb|EDR37987.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992364|gb|EDR44665.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206759|gb|EDR51239.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963157|gb|EDR59178.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049852|gb|EDR61260.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054941|gb|EDR64741.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752369|gb|ACA69887.1| transcriptional regulator, XRE family [Yersinia pseudotuberculosis
           YPIII]
 gi|186696965|gb|ACC87594.1| transcriptional regulator, XRE family [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682007|gb|EEO78099.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis Nepal516]
 gi|229690718|gb|EEO82772.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696694|gb|EEO86741.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229705918|gb|EEO91927.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis Pestoides A]
 gi|262360571|gb|ACY57292.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           D106004]
 gi|262364517|gb|ACY61074.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           D182038]
 gi|270336474|gb|EFA47251.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis KIM
           D27]
 gi|294353000|gb|ADE63341.1| nicotinamide-nucleotide adenylyltransferase [Yersinia pestis
           Z176003]
 gi|320016993|gb|ADW00565.1| NadR transcriptional repressor / ribosylnicotinamide kinase / NMN
           adenylyltransferase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 423

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + +  ++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKAFMNEKGIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPRYREQLGIETILIDPQRSF--MNISGRQIRR 213


>gi|332522316|ref|ZP_08398568.1| hypothetical protein STRPO_0930 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313580|gb|EGJ26565.1| hypothetical protein STRPO_0930 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 368

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +LEQA        I  +S        +Q   P   +     + +I  + G
Sbjct: 10  FNPFHYGHKYLLEQA----EGLKIVAMS-----GNFVQRGEPA--IVDKWTRAQIALENG 58

Query: 87  FSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDR 133
              ++   F  + A  SA+ F Q    ++  +   T+  GT+     DR
Sbjct: 59  ADIVVELPF--QVAVQSADYFAQGAIDILAKMGADTLAFGTEEDLDYDR 105


>gi|327314627|ref|YP_004330064.1| putative glycerol-3-phosphate cytidylyltransferase [Prevotella
           denticola F0289]
 gi|326944426|gb|AEA20311.1| putative glycerol-3-phosphate cytidylyltransferase [Prevotella
           denticola F0289]
          Length = 448

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 58/157 (36%), Gaps = 40/157 (25%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS---FNPHPRTIIQSSSPIFTLSPPSI 77
           V+  G +D +H GH  +L++A  + +   + V +   F+       +    +   S    
Sbjct: 4   VITYGTYDLLHQGHINLLKRAKSLGDYLIVGV-TNDNFD-------RERGKLNVKSNVLE 55

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAG 135
           + + + K G +  I             E ++ +    ++   V     G+ ++      G
Sbjct: 56  RVEAVRKTGLADKIII-----------EDYVGQKIDDIQKYNVDIFTVGSDWK------G 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
               L++         V++      +++ +SS+ +R 
Sbjct: 99  HFDYLKEFC-----DVVYLP-----RTEGISSTMLRK 125


>gi|257419002|ref|ZP_05595996.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T11]
 gi|257160830|gb|EEU90790.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T11]
          Length = 132

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A +  +   + + +                +      +++
Sbjct: 4   ILTYGTFDLLHYGHINLLKKAKQHGDYLIVGLST------DAFNLEKKKQSYFSYEKRKQ 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q +  +     ++ T++ G  +       G    
Sbjct: 58  LLEAIRYVDLVIP--------ETSWKQKVSDIA--EFKIDTLVMGDDW------QGAFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTAL 174
           L               ++    ++  VS++ I+  L
Sbjct: 102 L---------EVETTAKVLYLPRTPEVSTTQIKKEL 128


>gi|302881841|ref|XP_003039831.1| hypothetical protein NECHADRAFT_85672 [Nectria haematococca mpVI
           77-13-4]
 gi|256720698|gb|EEU34118.1| hypothetical protein NECHADRAFT_85672 [Nectria haematococca mpVI
           77-13-4]
          Length = 312

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 25  GNFDGIHLGHHLILEQAIKIANN-----SPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           G+F+  H GH  +L+     A +     + I +++ +   +  + +      LS    + 
Sbjct: 52  GSFNPPHQGHLKLLQHVFNNAGDDLNIVAAIVIMTDDDRLKDKLCTEEKPLILSR-EQRV 110

Query: 80  KILEKMGFSALIRYKFTLETANYSAE--QFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            +    G      + +    + +     Q   KV  + +++K ++ G     G     + 
Sbjct: 111 NLWRGTGIPVNWVWIYDKSESEWETFRTQLSAKVRKDGIDLKFILLGGPDVIGAGGMCNP 170

Query: 138 GILQKR 143
              +  
Sbjct: 171 EYWKCA 176


>gi|239906547|ref|YP_002953288.1| putative ADP-heptose synthase [Desulfovibrio magneticus RS-1]
 gi|239796413|dbj|BAH75402.1| putative ADP-heptose synthase [Desulfovibrio magneticus RS-1]
          Length = 162

 Score = 37.1 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI-IQSSSPIFTLSPPSIQE 79
           V   G FD +H GH  +L +A  + +   + V+  N       ++ +S     +P + + 
Sbjct: 28  VFTNGCFDLLHAGHADLLARARALGD---LLVVGLNDDASVARLKGASRPV--TPEAQRA 82

Query: 80  KILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL------EVKTVITGT 125
            +L  +         +    A  +  + I  V  + L       V +++ G 
Sbjct: 83  YVLASL-----ACVDYVSLFAEDTPLELILAVAPDVLVKGGDWPVASIVGGE 129


>gi|227503054|ref|ZP_03933103.1| pantoate--beta-alanine ligase [Corynebacterium accolens ATCC 49725]
 gi|227076115|gb|EEI14078.1| pantoate--beta-alanine ligase [Corynebacterium accolens ATCC 49725]
          Length = 273

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 62/208 (29%), Gaps = 32/208 (15%)

Query: 1   MHVFHN---IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +      +   ++  +   G V  +G    +H GH  ++ +A +  +    +V     
Sbjct: 1   MQILTTKSELRAFRAAASGSVGLVPTMG---ALHDGHASLIRRAREDNDTVVCSVFV--- 54

Query: 58  HPRTII---QSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
           +P                        +L+ +G  A+            +   +++   + 
Sbjct: 55  NPLQFTDLGDCEDYRAYPRTLDADAALLDSLGVDAVFASSVEEMYPGGTPRVWVRTGEMG 114

Query: 115 WL------------------EVKTVITGTKFRFGKDRAGDRGILQKRGEKYG--FHTVFI 154
            +                  ++  ++T  +  FG+  A    I+++           + +
Sbjct: 115 SVLEGASRPGHFDGVATVVSKLFHLVTPDRAYFGQKDAQQVAIIRRLVADLDLPLDIISV 174

Query: 155 DELRNNKSQIVSSSNIRTALTKGHVLNA 182
             +R       SS N R +  +     A
Sbjct: 175 PIVRATDGVAESSRNARLSAAEREQAVA 202


>gi|260578425|ref|ZP_05846339.1| pantoate--beta-alanine ligase [Corynebacterium jeikeium ATCC
          43734]
 gi|258603447|gb|EEW16710.1| pantoate--beta-alanine ligase [Corynebacterium jeikeium ATCC
          43734]
          Length = 306

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 2  HVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           VF  IE    L   ++        V  +G    +H GH  +++ A +I     + V+S 
Sbjct: 9  EVFTEIEKIGQLTRAMRKAGRPVALVPTMG---ALHEGHLSLVQAAQQIP--GALVVVSI 63

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
            +P    +                 L+  G  A+ 
Sbjct: 64 FVNPLQFAEGEDLDAYPRTLDEDVAKLKAAGVDAVF 99


>gi|170093135|ref|XP_001877789.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647648|gb|EDR11892.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 575

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 10/109 (9%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     +   +   + + I++K   G 
Sbjct: 203 MHRAHREL---TVRAARQRQANVLI---HPVVGLTKPGDVDHYTRVRVYQAIMQKYPNGM 256

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG 135
             L      +  A    E     ++ +       I G      GK+  G
Sbjct: 257 GHLALLPLAMRMAG-PREAVWHAIIRKNYGATHFIVGRDHAGPGKNSQG 304


>gi|1827504|dbj|BAA12186.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 490

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 34/176 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     I   +   + E IL++   G 
Sbjct: 198 MHRAHREL---TVRAAKQHGARVLI---HPVVGMTKPGDIDHFTRVRVYEAILQRYPKGS 251

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG-------DRGI 139
           + L      +  A    E     ++ +       I G      GK+  G       D   
Sbjct: 252 AKLSLLPLXMRMAG-PREALWHAIIRKNYGASHFIIGRDHAGPGKNSQGEDFYGPYDAQY 310

Query: 140 LQKRGEKYGFHTVF----------------IDELRNN-KSQIVSSSNIRTALTKGH 178
           L ++  +    T+                 +D++    ++  +S + +R  L  G 
Sbjct: 311 LVEQYAQEIGITIVPFQMMTYLPDEDIYKPVDKVEPGTRTLNISGTELRRRLRVGD 366


>gi|172057788|ref|YP_001814248.1| pantoate--beta-alanine ligase [Exiguobacterium sibiricum 255-15]
 gi|226739364|sp|B1YHQ8|PANC_EXIS2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|171990309|gb|ACB61231.1| pantoate--beta-alanine ligase [Exiguobacterium sibiricum 255-15]
          Length = 276

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 1  MHVFHNI-EINQSLPNHLK-GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
          M +  ++ ++ ++L      G +  +G    +H GH  +LEQA +  +   I VLS   +
Sbjct: 1  MKIMQSVTQLREALAGQTSVGFIPTMGF---LHEGHASLLEQARQEND---IVVLSIFVN 54

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEK-MGFSALI 91
          P      +  +        +++ L +  G   L 
Sbjct: 55 PTQ-FGPNEDLDRYPRDEQRDQQLAQAAGVDYLF 87


>gi|329766519|ref|ZP_08258062.1| cytidyltransferase-like protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329136774|gb|EGG41067.1| cytidyltransferase-like protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 157

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 16/149 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH  +L +A  I++   I  L+ +      +       TL+  S + + L  
Sbjct: 11  GTFDIIHKGHLTLLSKAFSISSKVIIG-LTSDE-----LAEKRGKKTLNKYSKRFETL-- 62

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR-GILQKR 143
                 I   F       S         V    ++ +I   +        G     L+  
Sbjct: 63  ---VRTINTNFPNHLYQISKLDNDFGPAVLEENIEALIVSDET----GNQGVILNQLRAE 115

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                   V +  +       +S+S I+ 
Sbjct: 116 KNLSPVKVVIVPMVLAQDGNRISTSRIKN 144


>gi|300867677|ref|ZP_07112322.1| cytidyltransferase-like protein [Oscillatoria sp. PCC 6506]
 gi|300334260|emb|CBN57494.1| cytidyltransferase-like protein [Oscillatoria sp. PCC 6506]
          Length = 168

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSS 67
           P   +  V   G FD IH GH   L+ A  +        NS  +V +  P      Q  S
Sbjct: 19  PLLWRPLVFTNGCFDIIHAGHVRYLQAAKALGRSLVVGLNSDASVQAIKPQ-----QLGS 73

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           P   + P   + ++L  +   A +        A+ +A + I+++ 
Sbjct: 74  PSRPIVPERQRAEVLAALKPVAAVVI-----FADPTANKLIERLK 113


>gi|222529222|ref|YP_002573104.1| hypothetical protein Athe_1231 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254799994|sp|B9MRM7|Y1231_ANATD RecName: Full=UPF0348 protein Athe_1231
 gi|222456069|gb|ACM60331.1| protein of unknown function DUF795 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 400

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  ++ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFIVFGSEC-------GDIDKLKETAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|195952798|ref|YP_002121088.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Hydrogenobaculum sp. Y04AAS1]
 gi|229485613|sp|B4U7J9|NADD_HYDS0 RecName: Full=Probable nicotinate-nucleotide adenylyltransferase;
           AltName: Full=Deamido-NAD(+) diphosphorylase; AltName:
           Full=Deamido-NAD(+) pyrophosphorylase; AltName:
           Full=Nicotinate mononucleotide adenylyltransferase;
           Short=NaMN adenylyltransferase
 gi|195932410|gb|ACG57110.1| nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 189

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 19/166 (11%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD IH+GH L+     ++ +   I    F P     I    P   ++ P  + ++L+ 
Sbjct: 8   GSFDPIHIGHILVARDVCELCDVDKIY---FMP---AFISPFKPKP-IASPKQRFEMLKL 60

Query: 85  MGFSALIRYKFTLETAN--YSAEQFIQKVLVEWL-EVKTVITGTKFRFGKDRAGDRGILQ 141
                   +   +E      S       +L E   +  T I G       D+      L 
Sbjct: 61  ALEDEPWAFIEDIELKKEEISYTYKSALILKEKYQQPPTFIIGYDAYLTLDKWYRYEDLV 120

Query: 142 KRGE----KYGFHTVFI-----DELRNNKSQIVSSSNIRTALTKGH 178
           K       K G   +FI         N ++  +SS+ IR  +  G 
Sbjct: 121 KIANFIVVKRGKEDIFINNDIDAIFCNTRTIDISSTEIRERIKHGK 166


>gi|154343019|ref|XP_001567455.1| ethanolamine-phosphate cytidylyltransferase [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134064787|emb|CAM42893.1| ethanolamine-phosphate cytidylyltransferase [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 403

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 19/138 (13%)

Query: 10  NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPI 69
           N S P      V   G+FD  H+GH  +L +A ++ +   + V       + + +     
Sbjct: 224 NNSSPKSGDRIVYVDGSFDLFHIGHIRVLRKARELGDYVIVGVYED----QVVNEQKGKN 279

Query: 70  FTLSPPSIQEK-ILEKMGFSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKTVITG--T 125
           + +   + +   +L       ++    F            + K +++ L +  V+ G  +
Sbjct: 280 YPIMNLNERVLGVLSCRYVDEVVMGVPFD-----------VSKEVIDELHIDVVVGGRLS 328

Query: 126 KFRFGKDRAGDRGILQKR 143
               G   +    + +  
Sbjct: 329 DVEAGAGGSTAYEVPKAM 346



 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 31/175 (17%)

Query: 9   INQSLPNHLKGGV--VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
             + +P    G +     G FD +H GH   L QA ++     +   S       +++  
Sbjct: 40  CTEEIPPKAPGTIRIWVDGCFDMLHFGHANALRQARRLGAELFVGCHSDE----EVMRFK 95

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
            P   +     + + L        ++         NY     ++   V+  E+  V+ G 
Sbjct: 96  GPP--MMHAEERYEALRACKWVDYVVE--------NYPYCTRLKD--VKRFEIDYVVHGD 143

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH 178
                 D        Q+  +   F  V        +++ +S++N+  R  L    
Sbjct: 144 DISVDLDGNNS---YQEIIDAGKFKVV-------KRTEGISTTNLVGRMLLCTKD 188


>gi|308184642|ref|YP_003928775.1| ADP-heptose synthase [Helicobacter pylori SJM180]
 gi|308060562|gb|ADO02458.1| ADP-heptose synthase [Helicobacter pylori SJM180]
          Length = 463

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 30/128 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++ ++L +H +  V   G FD +H GH   L++A  + +   +            + S +
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDLLHKGHASYLQKAKALGDILIVG-----------LNSDA 368

Query: 68  PIFTL-------SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            I  L            +  +L  +     ++ ++                 L++ L+  
Sbjct: 369 SIKRLKGDKRPIVSEKDRAFLLASLYCVDYVVVFEEDTPIK-----------LIQALKPD 417

Query: 120 TVITGTKF 127
            ++ G  +
Sbjct: 418 ILVKGADY 425


>gi|295425294|ref|ZP_06817997.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295065070|gb|EFG55975.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 382

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  +A   PI VL         +Q       +     + +   + G   
Sbjct: 13  FHSGHEFLLNQARLVAGKDPIIVL----MSGNYVQRGE--MAIMNKWSRARTALQSGADL 66

Query: 90  LIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
           +    F+     A+  A   I+ +    L VKT++ G
Sbjct: 67  VFEMPFSTSVEPADLFALGSIEALA--KLGVKTLVFG 101


>gi|284030694|ref|YP_003380625.1| cytidyltransferase-related domain-containing protein [Kribbella
           flavida DSM 17836]
 gi|283809987|gb|ADB31826.1| cytidyltransferase-related domain protein [Kribbella flavida DSM
           17836]
          Length = 138

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 60/152 (39%), Gaps = 26/152 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL +A +  ++    V+  +     ++Q       + P   + ++L  
Sbjct: 9   GVYDMFHIGHLNILRRASEHCDHLIAGVVEDD-----VVQRIKGRPPVVPHDERMEVLRA 63

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +G    ++        +++S+++F    + + L    +  G  ++  +        L+K 
Sbjct: 64  IGLVDEVV--------SDWSSDKFE---MWKQLRYDVLFKGDDWKGTEKGL----RLEKL 108

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             + G    +        +   SS+++R  L 
Sbjct: 109 LGEVGARVHYFP-----YTASTSSTDLRRLLE 135


>gi|225871185|ref|YP_002747132.1| hypothetical protein SEQ_1906 [Streptococcus equi subsp. equi 4047]
 gi|254800652|sp|C0M8A9|Y1906_STRE4 RecName: Full=UPF0348 protein SEQ_1906
 gi|225700589|emb|CAW95108.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 366

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 15/100 (15%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA        I  +S        +Q   P   L    ++ ++  + G
Sbjct: 10  FNPFHYGHQYLLSQA----KGLKIVAMS-----GNFVQRGEPA--LVDKWVRAQMALENG 58

Query: 87  FSALIRYKFTLET--ANYSAEQFIQKVLVEWLEVKTVITG 124
              ++   F +    A+Y A+  +  ++   L + T+  G
Sbjct: 59  ADLVVELPFLVSVQSADYFAQGAVDILM--RLGIDTLAFG 96


>gi|281417948|ref|ZP_06248968.1| pantetheine-phosphate adenylyltransferase [Clostridium thermocellum
           JW20]
 gi|281409350|gb|EFB39608.1| pantetheine-phosphate adenylyltransferase [Clostridium thermocellum
           JW20]
          Length = 159

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 34/159 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+++A K+ +   + VL        +  S +P+FTL     +  +L+ 
Sbjct: 8   GSFDPVTNGHMDIIQRAAKLCDKLVVAVL--------VNSSKNPVFTL---EERVDLLKC 56

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRG 138
              G   +         +       I  +  +    K +I G    + F +         
Sbjct: 57  AVKGIDNVEI----ESFSGL----LIDFMRKK--NSKVIIKGLRAVSDFEY----ELQMA 102

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +L K  +     T+F+  + N     +SSS++R      
Sbjct: 103 LLNKNLDS-DIETLFM--MTNINYSFLSSSSVRELARHN 138


>gi|134101991|ref|YP_001107652.1| hypothetical protein SACE_5541 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914614|emb|CAM04727.1| hypothetical protein with pantoate--beta-alanine ligase and
           Hydroxymethylglutaryl-coenzyme A reductase domains
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 695

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ--EKI 81
           +G F   H GH  ++E A +  +   + V+S   +P     S    F   P   +    I
Sbjct: 1   MGAF---HAGHESLMEAARRECD---VVVVSLFVNPAQF--SDDGGFETYPRDERRDAAI 52

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             + G   L    F  ETA    + F   V V  
Sbjct: 53  AARQGVDVL----FAPETAEIYPDGFATTVSVGG 82


>gi|83649599|ref|YP_438034.1| NAD metabolism ATPase/kinase [Hahella chejuensis KCTC 2396]
 gi|83637642|gb|ABC33609.1| predicted ATPase/kinase involved in NAD metabolism [Hahella
          chejuensis KCTC 2396]
          Length = 333

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 22 VAIGNFDGIHLGHHLILEQAIKIANNSPITVL 53
          + +G F  +H GH  ++EQA++  ++  + + 
Sbjct: 14 LTLGKFAPLHKGHQYLIEQALEQVDHLLVMIY 45


>gi|257457369|ref|ZP_05622540.1| [citrate (pro-3S)-lyase] ligase [Treponema vincentii ATCC 35580]
 gi|257445291|gb|EEV20363.1| [citrate (pro-3S)-lyase] ligase [Treponema vincentii ATCC 35580]
          Length = 347

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 32  LGHHLILEQAIKIANNSPITVLS-------FNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           +GH+ ++EQA    ++  + ++S       F    R I ++++    +S    Q+ ++  
Sbjct: 158 IGHYYLVEQAAAAVDHLHLFMVSDDASAIPFAVRERLIKENTAHFKNISYHRTQDYLISS 217

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEW-LEVKTVITGTKFRFGKDRAGDRGILQKR 143
             F A          A  +A      + +   L +     G    F         ILQ  
Sbjct: 218 ATFPAYFLRDSDEAIALQAALDADIFIAIAHALSITHRFVG-DEPFSHVTGLYNRILQDS 276

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
              +G     I   +      +S+S  R  L +      A +
Sbjct: 277 LPAHGVQLHVIPR-KTENGVPISASAARRLLQQEDWTKLAAI 317


>gi|294660028|ref|XP_462480.2| DEHA2G21560p [Debaryomyces hansenii CBS767]
 gi|199434415|emb|CAG90990.2| DEHA2G21560p [Debaryomyces hansenii]
          Length = 446

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 4   FHNIEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           +  +    ++P   +   + A G FD  HLGH   LEQA K   N  +        P  +
Sbjct: 100 YRPLGFKFNIPPKDRPIRIYADGVFDLFHLGHMKQLEQAKKAFPNVALVCGI----PSDV 155

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALI 91
                   T+     + + L+       +I
Sbjct: 156 ETHKRKGLTVLTDQQRIETLQHCRWVDEVI 185


>gi|255038302|ref|YP_003088923.1| pantoate/beta-alanine ligase [Dyadobacter fermentans DSM 18053]
 gi|254951058|gb|ACT95758.1| pantoate/beta-alanine ligase [Dyadobacter fermentans DSM 18053]
          Length = 280

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 41/215 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF +++  +   +         G V  +G    +H GH  ++E A K  +   I V S
Sbjct: 1   MEVFTSVKSLRQYLDQQLLQQKTVGLVPTMG---ALHEGHISLIEAARKDTD---IVVCS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P                     +LE  G SA+    F         EQ + K+   
Sbjct: 55  VFVNPTQFNNPEDLAKYPRTFEADRAMLENAGCSAV----FAPSVEEMYPEQPVVKMNFG 110

Query: 115 WL-------------EVKTVITGTKF--------RFGKDRAGDRGILQKRGE--KYGFHT 151
            L                 ++    F         FG+       ++++      +G   
Sbjct: 111 ALETVMEGASRPGHFNGVGIVVSKLFNIVRPHRAYFGQKDLQQVSVVRQLVSDLAFGLEL 170

Query: 152 VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           +    +R      +SS N R  L       A H+ 
Sbjct: 171 IVCPTVREKDGLAMSSRNTR--LDATERAIAPHIY 203


>gi|68535351|ref|YP_250056.1| pantoate--beta-alanine ligase [Corynebacterium jeikeium K411]
 gi|123651593|sp|Q4JXL9|PANC_CORJK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|68262950|emb|CAI36438.1| pantoate-beta-alanine ligase [Corynebacterium jeikeium K411]
          Length = 306

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 2  HVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           VF  IE    L   ++        V  +G    +H GH  +++ A +I     + V+S 
Sbjct: 9  EVFTEIEKIGQLTRAMRKAGRPVALVPTMG---ALHEGHLSLVQAAQQIP--GALVVVSI 63

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
            +P    +                 L+  G  A+ 
Sbjct: 64 FVNPLQFAEGEDLDAYPRTLDEDVAKLKAAGVDAVF 99


>gi|331265660|ref|YP_004325290.1| phosphopantetheine adenylyltransferase [Streptococcus oralis Uo5]
 gi|326682332|emb|CBY99949.1| phosphopantetheine adenylyltransferase [Streptococcus oralis Uo5]
          Length = 162

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A K+ +   + V  +NPH +  +          P   +++ +EK
Sbjct: 10  GSFDPMTNGHLDMIERASKLFDKLYVGVF-YNPHKQGFL----------PVENRKRAVEK 58

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                  +            S +Q +  V    L  KT++ G +                
Sbjct: 59  AVAHLDNVEVLA--------SHDQLVVDVA-RRLGAKTLVRGLRNTTDLQYESSFDY--- 106

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +       I      +   +SSS +R  L
Sbjct: 107 YNHQLAPEIETIYLYSRPEHLYISSSAVRELL 138


>gi|312863032|ref|ZP_07723270.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           vestibularis F0396]
 gi|311100568|gb|EFQ58773.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           vestibularis F0396]
          Length = 165

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 21/150 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  I+ +A K+ +   I +             +   F       +++ILE+
Sbjct: 9   GSFDPITNGHMDIIARASKLFDELYIGL---------FYNKNKQGFW--DIETRKRILEE 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
           +                 +A   +   +   L V  ++ G +     D   +        
Sbjct: 58  VVADL-------PNVKVITAHDSLAVDVARELGVTYLVRGLRNATDFDYEANMDY---FN 107

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +        +  + +++   VSSS +R  +
Sbjct: 108 KGLAPELETVYLIASHEVTPVSSSRVRELI 137


>gi|311030319|ref|ZP_07708409.1| pantoate--beta-alanine ligase [Bacillus sp. m3-13]
          Length = 118

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 12/97 (12%)

Query: 1  MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
          M +   I   Q +    K      G V  +G    +H GH  +L++A +   N+ I VLS
Sbjct: 1  MKIIKQISDMQRVMKIEKQQGKKVGFVPTMGY---LHEGHQTLLKEARE---NNDIVVLS 54

Query: 55 FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
             +P     +             E+I    G   L 
Sbjct: 55 IFVNPLQFGPNEDLDAYPRDFERDEEIAALRGVDYLF 91


>gi|256810092|ref|YP_003127461.1| cytidyltransferase-related domain protein [Methanocaldococcus
           fervens AG86]
 gi|256793292|gb|ACV23961.1| cytidyltransferase-related domain protein [Methanocaldococcus
           fervens AG86]
          Length = 150

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 26/160 (16%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIF---TL 72
           +K  VV  G FD +H GH  +L+ A  +     +TV ++ +      ++           
Sbjct: 1   MKKKVVVGGTFDILHKGHRELLKFASSL---GKLTVGITSD----EFVKKYKKHEVNDLK 53

Query: 73  SPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           +     +K L+ +     I+          + +  I  V  E L                
Sbjct: 54  TRIENLKKFLDNIKADYEIKVINDAYGDAITEDYDIIVVTKETL---------------K 98

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            A     ++K         +   ++     +I+S++ IR 
Sbjct: 99  NAEKINEIRKIKGLKPLEIIVFRDILAEDGKIISTTRIRK 138


>gi|153854448|ref|ZP_01995726.1| hypothetical protein DORLON_01721 [Dorea longicatena DSM 13814]
 gi|149752974|gb|EDM62905.1| hypothetical protein DORLON_01721 [Dorea longicatena DSM 13814]
          Length = 446

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 36/155 (23%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNS--PITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +LE+A  + +     +T   F+       ++   I        +
Sbjct: 4   VITYGTYDLLHYGHIRLLERAKALGDYLIVGVTADDFD-------KNRGKINVQQSLMER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
            + +   G    +I  ++          +  +   ++   V     G  +       G  
Sbjct: 57  VEAVRNTGLADEIIIEEY----------EGQKIDDIQKYNVDIFTVGDDW------VGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
             L +  +           +   +++ VSSS +R 
Sbjct: 101 DYLGEYCKV----------VYLERTKGVSSSELRQ 125


>gi|121997471|ref|YP_001002258.1| pantoate--beta-alanine ligase [Halorhodospira halophila SL1]
 gi|158706017|sp|A1WUU4|PANC_HALHL RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|121588876|gb|ABM61456.1| pantothenate synthetase [Halorhodospira halophila SL1]
          Length = 285

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
          G V  +GN   +H GH  ++E+  +  +     V+S   +P                   
Sbjct: 25 GLVPTMGN---LHRGHLELVERLARRVDRL---VVSIFVNPLQFGPGEDYDAYPRTLEAD 78

Query: 79 EKILEKMGFSALI 91
             LE  G  A+ 
Sbjct: 79 LNALEGRGVDAVF 91


>gi|114565676|ref|YP_752830.1| pantoate--beta-alanine ligase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122319151|sp|Q0B0P5|PANC_SYNWW RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|114336611|gb|ABI67459.1| pantothenate synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 282

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 40/200 (20%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M VF NI   Q      K        V  +G    +H GH  ++++A +  +     V+S
Sbjct: 1   MQVFENITKMQEWAREQKKQGQSIALVPTMGY---LHEGHLALVKEARRQCDK---VVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV- 113
              +P                     +LEK    AL    F+    +     F   V V 
Sbjct: 55  IFVNPIQFGAGEDFEQYPRDLEQDSALLEKERVDAL----FSPGIRDMYPGSFQTFVEVY 110

Query: 114 --------------EWLEVKTVITG-------TKFRFGKDRAGDRGILQKRGEKYGF--H 150
                          +  V TV++         +  FG+  A    I++K   +  F   
Sbjct: 111 GEITEKMCGASRPGHFKGVTTVVSKLFNICQPDRAYFGQKDAQQLMIVEKMVRELNFPLE 170

Query: 151 TVFIDELRNNKSQIVSSSNI 170
            + +  +R      +SS N+
Sbjct: 171 IIRVPIVREKDGLAMSSRNV 190


>gi|313891733|ref|ZP_07825338.1| bifunctional protein RfaE, domain II [Dialister microaerophilus
           UPII 345-E]
 gi|329121035|ref|ZP_08249666.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Dialister micraerophilus DSM 19965]
 gi|313119727|gb|EFR42914.1| bifunctional protein RfaE, domain II [Dialister microaerophilus
           UPII 345-E]
 gi|327471197|gb|EGF16651.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Dialister micraerophilus DSM 19965]
          Length = 482

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 31/173 (17%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           I++ +   N  +  V   G FD +H GH   L++A ++     + V       +++ +  
Sbjct: 339 IKLIKKWKNEGEKIVFTNGCFDLLHRGHVTYLKKAAQLGTRFVVGV----NSDKSVSRLK 394

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                +     +  IL ++    A++   F  +    +    I       L+   ++ G 
Sbjct: 395 GKKRPIQNIEDRVYILNELPYIDAIVV--FDED----TPLNLISL-----LKPDVLVKGG 443

Query: 126 KFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            ++  KD        +  G+ Y    + I  + N      S++NI   + K +
Sbjct: 444 DYK--KD--------EIVGKNYAKEVIVIPFVEN-----CSTTNIINKILKIN 481


>gi|309803298|ref|ZP_07697395.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
 gi|312871697|ref|ZP_07731785.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
 gi|329920074|ref|ZP_08276905.1| hypothetical protein HMPREF9210_0448 [Lactobacillus iners SPIN
           1401G]
 gi|308164806|gb|EFO67056.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
 gi|311092639|gb|EFQ50995.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
 gi|328936528|gb|EGG32972.1| hypothetical protein HMPREF9210_0448 [Lactobacillus iners SPIN
           1401G]
          Length = 387

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  I+ N PI VL         +Q      ++     + K     G   
Sbjct: 14  FHSGHEFLLNQARLISQNKPIVVL----MSGNYVQRGQ--ISICDKWSRAKSALLSGADL 67

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +    F+          +    ++E L V  ++ G
Sbjct: 68  VFELPFSYAVQPADIFAYGSMKILEQLGVSDLVFG 102


>gi|259500531|ref|ZP_05743433.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191221|ref|ZP_07267475.1| hypothetical protein LineA_04357 [Lactobacillus iners AB-1]
 gi|309808119|ref|ZP_07702033.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|312872954|ref|ZP_07733014.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
 gi|312874246|ref|ZP_07734280.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
 gi|312875579|ref|ZP_07735580.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
 gi|315653634|ref|ZP_07906554.1| conserved hypothetical protein [Lactobacillus iners ATCC 55195]
 gi|325912157|ref|ZP_08174555.1| hypothetical protein HMPREF0522_0874 [Lactobacillus iners UPII
           143-D]
 gi|325912700|ref|ZP_08175083.1| hypothetical protein HMPREF0523_0779 [Lactobacillus iners UPII
           60-B]
 gi|259167915|gb|EEW52410.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|308168631|gb|EFO70735.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|311088833|gb|EFQ47276.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
 gi|311090316|gb|EFQ48726.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
 gi|311091476|gb|EFQ49860.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
 gi|315488996|gb|EFU78638.1| conserved hypothetical protein [Lactobacillus iners ATCC 55195]
 gi|325476107|gb|EGC79275.1| hypothetical protein HMPREF0522_0874 [Lactobacillus iners UPII
           143-D]
 gi|325478121|gb|EGC81250.1| hypothetical protein HMPREF0523_0779 [Lactobacillus iners UPII
           60-B]
          Length = 386

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +L QA  I+ N PI VL         +Q      ++     + K     G   
Sbjct: 13  FHSGHEFLLNQARLISQNKPIVVL----MSGNYVQRGQ--ISICDKWSRAKSALLSGADL 66

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
           +    F+          +    ++E L V  ++ G
Sbjct: 67  VFELPFSYAVQPADIFAYGSMKILEQLGVSDLVFG 101


>gi|158423878|ref|YP_001525170.1| bifunctional protein [Azorhizobium caulinodans ORS 571]
 gi|172047951|sp|A8I5B0|HLDE_AZOC5 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|158330767|dbj|BAF88252.1| bifunctional protein [Azorhizobium caulinodans ORS 571]
          Length = 479

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH  +LEQ+    +   + + + +   R +   S P   L     + +
Sbjct: 349 VFTNGCFDLVHPGHVSLLEQSAAQGDRLVVALNT-DASVRRLKGPSRP---LQDEQARAR 404

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           ++  M    L+   F  E              ++ L    ++ G  +
Sbjct: 405 VMGAMRCVDLVVL-FDEE---------TPLETIKALLPDVLVKGADY 441


>gi|152965790|ref|YP_001361574.1| cytidyltransferase-related domain [Kineococcus radiotolerans
           SRS30216]
 gi|151360307|gb|ABS03310.1| cytidyltransferase-related domain [Kineococcus radiotolerans
           SRS30216]
          Length = 146

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 42/152 (27%), Gaps = 30/152 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H+GH  IL +A    ++    V+S       +  +      +     + +I   
Sbjct: 20  GVFDLFHIGHLNILRRARIHCDHLIAGVVS-----DEVALAQKGRRPVVGERERLEI--- 71

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAGDRG--ILQ 141
                          A       +               G    F G D  G      L+
Sbjct: 72  --------------VAAMRVVDAVHLETTTDKLTTWTEVGFDVVFKGDDWKGTPKWTHLE 117

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
           +     G   V++       + + SS+  R  
Sbjct: 118 REFASRGVRVVYLP-----YTPVTSSTERREL 144


>gi|300865158|ref|ZP_07109982.1| Cytidyltransferase-related [Oscillatoria sp. PCC 6506]
 gi|300336848|emb|CBN55132.1| Cytidyltransferase-related [Oscillatoria sp. PCC 6506]
          Length = 515

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 58/164 (35%), Gaps = 25/164 (15%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+  +L    +  V+  G FD +H GH   L++A  + +   + V+S    P        
Sbjct: 17  EVLAALREQGRKIVLCHGVFDLLHPGHFAHLQEAKALGD---LLVVSITAAPYVNRGPGR 73

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
           P+F      ++   +  +G    ++    +               +++ ++      G +
Sbjct: 74  PVF---SDDLRLYSIASLGCVDYVLLAPVSTAL-----------EVIDRVQPDFYCKGHE 119

Query: 127 FRF-GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSN 169
           +    +D   +     +R   YG       ++R     + SS+ 
Sbjct: 120 YTDHSQDVTQNIDREAERVMAYGG------KIRYTGEIVFSSTR 157


>gi|315503422|ref|YP_004082309.1| pantoate/beta-alanine ligase [Micromonospora sp. L5]
 gi|315410041|gb|ADU08158.1| pantoate/beta-alanine ligase [Micromonospora sp. L5]
          Length = 280

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
          G V+ +G    +H GH  +L  A + A +    +++   +P     +             
Sbjct: 23 GVVMTMG---ALHAGHEALLRAARERAGH---VIVTIFVNPLQFGPNEDFDRYPRTLDSD 76

Query: 79 EKILEKMGFSALI 91
           +I  + G   + 
Sbjct: 77 LEICRRAGVDVVF 89


>gi|225850667|ref|YP_002730901.1| pantoate--beta-alanine ligase [Persephonella marina EX-H1]
 gi|225645361|gb|ACO03547.1| pantoate--beta-alanine ligase [Persephonella marina EX-H1]
          Length = 289

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 55/172 (31%), Gaps = 33/172 (19%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++  + K  +   ITV+S   +P    ++             
Sbjct: 34  GFVPTMGY---LHEGHISLIRASKKEND---ITVVSIFVNPLQFGKNEDLDRYPRDLERD 87

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVITG 124
            +I  + G   L    F     +   E F   V+VE +               V TV+T 
Sbjct: 88  MEICRREGVDYL----FYPSYEDMYPEGFSTYVVVEGITEKLCGAFRPGHFKGVTTVVTK 143

Query: 125 -------TKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSS 167
                   +  FGK       ++QK           I    +R      +SS
Sbjct: 144 LFNIVKPDRAYFGKKDYQQFKVIQKMVRDLNMDVQVIGCPIVREKDGLAMSS 195


>gi|226325380|ref|ZP_03800898.1| hypothetical protein COPCOM_03182 [Coprococcus comes ATCC 27758]
 gi|225206123|gb|EEG88477.1| hypothetical protein COPCOM_03182 [Coprococcus comes ATCC 27758]
          Length = 297

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 32/192 (16%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   +E  + L  + K      G V  +G    +H GH  ++++  +  +   I V+S
Sbjct: 19  MQVTTTVEETRKLVKNWKKEGKTVGLVPTMGF---LHEGHASLIKRCREEND---IVVVS 72

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P     +              ++ E +G   LI +    +  +          L +
Sbjct: 73  DFVNPTQFGPTEDLEAYPRDFKRDSELCESLGAD-LIFHPEPKDMYHDPHAYVSIDTLSD 131

Query: 115 WLEVKT-----------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--D 155
            L  KT                 ++   +  FG+  A    I++K  +   F    +   
Sbjct: 132 TLCGKTRPIHFKGVCTVVSKLFNIVAPDRAYFGQKDAQQLAIIRKMVQDLNFDIQIVGCP 191

Query: 156 ELRNNKSQIVSS 167
            +R       SS
Sbjct: 192 IIREEDGLAKSS 203


>gi|125973791|ref|YP_001037701.1| phosphopantetheine adenylyltransferase [Clostridium thermocellum
           ATCC 27405]
 gi|256004522|ref|ZP_05429501.1| pantetheine-phosphate adenylyltransferase [Clostridium thermocellum
           DSM 2360]
 gi|166216541|sp|A3DEX9|COAD_CLOTH RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|125714016|gb|ABN52508.1| Phosphopantetheine adenylyltransferase [Clostridium thermocellum
           ATCC 27405]
 gi|255991527|gb|EEU01630.1| pantetheine-phosphate adenylyltransferase [Clostridium thermocellum
           DSM 2360]
 gi|316940016|gb|ADU74050.1| pantetheine-phosphate adenylyltransferase [Clostridium thermocellum
           DSM 1313]
          Length = 159

 Score = 36.7 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 34/159 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+++A K+ +   + VL        +  S +P+FTL     +  +L+ 
Sbjct: 8   GSFDPVTNGHMDIIQRAAKLCDKLVVAVL--------VNSSKNPVFTL---EERVDLLKC 56

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRG 138
              G   +         +       I  +  +    K +I G    + F +         
Sbjct: 57  AVKGIDNVEI----ESFSGL----LIDFMRKK--NSKVIIKGLRAVSDFEY----ELQMA 102

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +L K  +     T+F+  + N     +SSS++R      
Sbjct: 103 LLNKNLDS-DIETLFM--MTNINYSFLSSSSVRELARHN 138


>gi|325694148|gb|EGD36066.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK150]
          Length = 164

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMTKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +       E A   A +   +V V  L            +  +       +    
Sbjct: 61  QHLDNVEVITSQNELAVTVARRLGTQVFVRGLRNS-----QDLDYEAN-------MNFFN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +       I  L     Q +SSS IR  + 
Sbjct: 109 HELAGELETIFLLSKPAYQHISSSRIRELIA 139


>gi|254283753|ref|ZP_04958721.1| bifunctional protein HldE [gamma proteobacterium NOR51-B]
 gi|219679956|gb|EED36305.1| bifunctional protein HldE [gamma proteobacterium NOR51-B]
          Length = 476

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H GH   LE A  + +   I  L+ +    ++ +   P   ++P   
Sbjct: 342 ERVVMTNGCFDLLHAGHVAYLEAARALGDRL-IVALNDD---ASVARLKGPERPINPLDS 397

Query: 78  QEKILEKM-GFSALIRYKFTLE 98
           + ++L  +     ++   F  +
Sbjct: 398 RARVLSGLRSVDWVV--PFEED 417


>gi|302544375|ref|ZP_07296717.1| pantoate-beta-alanine ligase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302461993|gb|EFL25086.1| pantoate-beta-alanine ligase [Streptomyces himastatinicus ATCC
           53653]
          Length = 328

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 20/71 (28%), Gaps = 3/71 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+ +G    +H GH  ++  A        +  ++   +P                    +
Sbjct: 41  VMTMG---ALHDGHASLIRAARARVGAKGLVTVTVFVNPLQFGAGEDLDRYPRTLDADLE 97

Query: 81  ILEKMGFSALI 91
           +    G   + 
Sbjct: 98  VAAAAGADIVF 108


>gi|254779878|ref|YP_003057984.1| putative nicotinate-nucleotide adenyltransferase [Helicobacter
           pylori B38]
 gi|254001790|emb|CAX30021.1| Putative nicotinate-nucleotide adenyltransferase [Helicobacter
           pylori B38]
          Length = 171

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I+EQ +++   + + VL                  L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIEQTLELLPFAQLIVL------PAYQNPFKKPCFLDAKTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  I    +   +   +I G           +   
Sbjct: 69  LK--GMPRVLLSDFEIKQERAVPTIESVIFFQKLYRPKTLYLIIGADCLRHLSSWTNATE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQI--------VSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 169


>gi|145488675|ref|XP_001430341.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397438|emb|CAK62943.1| unnamed protein product [Paramecium tetraurelia]
          Length = 421

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 65/222 (29%), Gaps = 49/222 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA ++     + V+         I  +     +     +  +   
Sbjct: 70  GCFDLMHSGHFNALRQAKELCETLVVGVI-----KSDAIAKAKGPP-IMTDEERLALASA 123

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                 ++  +        + +  I++  ++      V  G       D        +  
Sbjct: 124 CKWVDEVVIQE--------TYDPTIEQ--IDRHSCSHVAHGDDLVQTADGKDAYQPFKDA 173

Query: 144 GEKYGFHTVFIDELRNNKSQIVSSSNI--RTALTKGH-------------VLNAAHLLGY 188
                F           +++ +S+++I  R  L                 V+ A+++   
Sbjct: 174 KRMKIFK----------RTEGISTTDIVGRMLLMTKEVMWEEKKVFQKQTVVEASNINSL 223

Query: 189 RFTIESDVIHGEKIGRTLGFPTANM-QLSPDILLKEG---VY 226
                  V   + +   +   T  + Q S +   K G   VY
Sbjct: 224 EID---QVSIEQTLNNKILNTTRRIMQFSNNKKPKPGDKIVY 262


>gi|312127706|ref|YP_003992580.1| hypothetical protein Calhy_1494 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777725|gb|ADQ07211.1| protein of unknown function DUF795 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 400

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  ++ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFIVFGSEC-------GDIDKLKETAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|126180236|ref|YP_001048201.1| cytidyltransferase-like protein [Methanoculleus marisnigri JR1]
 gi|327488412|sp|A3CXW9|RIBL_METMJ RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|125863030|gb|ABN58219.1| FMN adenylyltransferase [Methanoculleus marisnigri JR1]
          Length = 149

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 46/155 (29%), Gaps = 25/155 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VVA G FD +H GH   LE++  + +   + V       R       P   L P   + +
Sbjct: 4   VVATGTFDILHPGHLYYLEESRNLGDELSVIV------ARDANVKHKPRPFL-PEDQRLR 56

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ++  +      +                     +  +    +  G    F      D   
Sbjct: 57  MIRALKPVDHALLGDLHDMFR-----------PIAEIRPDIITLGFNQHF------DEEH 99

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+++  + G     +       S   SS  I   L
Sbjct: 100 LRQKLRERGLDADVVRIPGYPGSLASSSKIIERIL 134


>gi|110640200|ref|YP_680410.1| pantothenate synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163089|sp|Q11NE6|PANC_CYTH3 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|110282881|gb|ABG61067.1| pantothenate synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 283

 Score = 36.7 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 28/189 (14%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           NH  G V  +G    +H GH  +++QA        + V S   +P               
Sbjct: 21  NHSVGFVPTMG---ALHRGHISLIKQAKAENT---VCVASIFVNPLQFNNPEDFNKYPIQ 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWL--EVKT--------VITG 124
                K++ + G   L       E         I   L++ +              ++  
Sbjct: 75  RESDMKLMSEAGCDILF-MPDVAEFYPTRPNMKIDIGLLDQILEGAHRPGHFSGVAIVVS 133

Query: 125 TKFR--------FGKDRAGDRGILQKRGEKYGFHTVFI--DELRNNKSQIVSSSNIRTAL 174
             F         FG+       ++++   +  F    I    +R      +SS N+R   
Sbjct: 134 KLFHIIEPGKAYFGQKDIQQVAVIRQLVSELNFPIEIIACPIIREESGLAMSSRNMR-LS 192

Query: 175 TKGHVLNAA 183
            +G  + A 
Sbjct: 193 AQGKAVAAN 201


>gi|146319334|ref|YP_001199046.1| phosphopantetheine adenylyltransferase [Streptococcus suis 05ZYH33]
 gi|146321536|ref|YP_001201247.1| phosphopantetheine adenylyltransferase [Streptococcus suis 98HAH33]
 gi|253752363|ref|YP_003025504.1| phosphopantetheine adenylyltransferase [Streptococcus suis SC84]
 gi|253754189|ref|YP_003027330.1| phosphopantetheine adenylyltransferase [Streptococcus suis P1/7]
 gi|253756123|ref|YP_003029263.1| phosphopantetheine adenylyltransferase [Streptococcus suis BM407]
 gi|166216610|sp|A4W3A8|COAD_STRS2 RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|166216612|sp|A4VX07|COAD_STRSY RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|145690140|gb|ABP90646.1| lipopolysaccharide core biosynthesis protein [Streptococcus suis
           05ZYH33]
 gi|145692342|gb|ABP92847.1| lipopolysaccharide core biosynthesis protein [Streptococcus suis
           98HAH33]
 gi|251816652|emb|CAZ52293.1| phosphopantetheine adenylyltransferase [Streptococcus suis SC84]
 gi|251818587|emb|CAZ56421.1| phosphopantetheine adenylyltransferase [Streptococcus suis BM407]
 gi|251820435|emb|CAR47110.1| phosphopantetheine adenylyltransferase [Streptococcus suis P1/7]
 gi|292558965|gb|ADE31966.1| lipopolysaccharide core biosynthesis protein [Streptococcus suis
           GZ1]
 gi|319758767|gb|ADV70709.1| phosphopantetheine adenylyltransferase [Streptococcus suis JS14]
          Length = 162

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 25/152 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  ++E+A  + +   + V +                 L+    +  ILEK
Sbjct: 10  GSFDPITNGHLDLIERASGLFDKLYVGVFT---------NPKKA-GLLTGLERKA-ILEK 58

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           +  G   +            S  + +  V  +   V  ++ G +     +          
Sbjct: 59  LFVGMENIEVV--------LSENELVVDVA-KRYGVTHLVRGLRNATDLEYESSFDF--- 106

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              +       I  +   + + VSSS +R  L
Sbjct: 107 YNRQLAPGLETIYLIAKPELKFVSSSQVRELL 138


>gi|270659709|ref|ZP_06222369.1| ADP-heptose synthase [Haemophilus influenzae HK1212]
 gi|270316954|gb|EFA28638.1| ADP-heptose synthase [Haemophilus influenzae HK1212]
          Length = 179

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   LE A K+ +   + V S +   R  ++  S    ++    +  
Sbjct: 46  VMTNGCFDILHPGHVSYLENARKLGDRLIVAVNSDDSVKR--LKGDSRP--INNLENRMA 101

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     L+   FT +    + ++ I ++L + L     + G  ++
Sbjct: 102 VLAGLASVDWLV--PFTED----TPQRLIGEILPDLL-----VKGGDYK 139


>gi|197286204|ref|YP_002152076.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Proteus mirabilis HI4320]
 gi|226702249|sp|B4EW46|HLDE_PROMH RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|194683691|emb|CAR44655.1| bifunctional protein HldE [includes: D-beta-D-heptose 7-phosphate
           kinase and D-beta-D-heptose 1-phosphate
           adenosyltransferase] [Proteus mirabilis HI4320]
          Length = 474

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 41/165 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V+  G FD +H GH   L  A K+ +   + V            S +    L       +
Sbjct: 343 VMTNGCFDILHAGHVSYLANARKLGDRLIVAV-----------NSDASTKRLKGESRPVN 391

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           P   +  +L  +G    ++           + ++ I  VL + L     + G  ++  +D
Sbjct: 392 PLEQRMTVLGALGAVDWVV------AFEEDTPQRLIASVLPDIL-----VKGGDYK-PED 439

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            AG + +        G     +     N    +S++NI  A+ K 
Sbjct: 440 IAGSKEVWAA-----GGEVKVL-----NFEDGISTTNIINAIKKK 474


>gi|119469114|ref|ZP_01612098.1| glycerol-3-phosphate cytidyltransferase [Alteromonadales bacterium
           TW-7]
 gi|119447366|gb|EAW28634.1| glycerol-3-phosphate cytidyltransferase [Alteromonadales bacterium
           TW-7]
          Length = 131

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 20/143 (13%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH  ILE+A  + +   + V S       +         +   S + K
Sbjct: 4   VITFGTFDIVHVGHINILERAKSLGDYLIVGVSS-----DALNMQKKGRNPIYSESDRVK 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           I+  +     I  + +LE        +I++   + L     + G  +     +  +   L
Sbjct: 59  IISSLRCVDEIFIEHSLELKG----DYIKEHDADLL-----VMGDDW---AGKFDNFKTL 106

Query: 141 ---QKRGEKYGFHTVFIDELRNN 160
              Q         T  I E+  N
Sbjct: 107 CDVQYLTRTPSISTTEIIEVVRN 129


>gi|37362661|ref|NP_012121.2| Pan6p [Saccharomyces cerevisiae S288c]
 gi|84028236|sp|P40459|PANC_YEAST RecName: Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme; AltName:
          Full=Pantothenate synthetase
 gi|151943021|gb|EDN61356.1| pantothenate synthase [Saccharomyces cerevisiae YJM789]
 gi|256270241|gb|EEU05461.1| Pan6p [Saccharomyces cerevisiae JAY291]
 gi|259147108|emb|CAY80361.1| Pan6p [Saccharomyces cerevisiae EC1118]
 gi|285812509|tpg|DAA08408.1| TPA: Pan6p [Saccharomyces cerevisiae S288c]
          Length = 309

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1  MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
          M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 1  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 54

Query: 52 VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
          V+S   +P     +              K+LE +    L 
Sbjct: 55 VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 94


>gi|89092447|ref|ZP_01165401.1| Coenzyme A biosynthesis protein:Cytidyltransferase-related
           [Oceanospirillum sp. MED92]
 gi|89083535|gb|EAR62753.1| Coenzyme A biosynthesis protein:Cytidyltransferase-related
           [Oceanospirillum sp. MED92]
          Length = 159

 Score = 36.7 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 26/151 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD I  GH  ++E+A K+ +   + +                     P   +  ++ +
Sbjct: 8   GTFDPITNGHSDLIERAAKLFDKVVVAI---------AESPKKRPML--PLETRVALVAE 56

Query: 85  --MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
                  +    F    A   A+Q    +++  L     ++  ++ F          L  
Sbjct: 57  VTAHLDNVEIVGFDCLLAELLAQQNA-NIILRGLRA---VSDFEYEF---------QLAA 103

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
                  +   I          VSS+ IR  
Sbjct: 104 MNRHLAPNVESIFLTPAEHLSFVSSTLIREI 134


>gi|317154765|ref|YP_004122813.1| rfaE bifunctional protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316945016|gb|ADU64067.1| rfaE bifunctional protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 167

 Score = 36.7 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 1   MHVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR 60
           M +   ++    LP   +  V   G FD +H GH  +L +A  + ++  + + S +   +
Sbjct: 10  MSIRTFLKKKAELPPSHR-LVFTNGCFDILHPGHVDLLARARALGDSLVLGLNS-DESVK 67

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            + +       L+    +  +L  +     +I +            +     L++ +  +
Sbjct: 68  RLGKGDDRP--LNTQEERAFVLAGLACVDCIIVFH-----------ESTPLELIKAVRPQ 114

Query: 120 TVITGTKFR 128
            ++ G  + 
Sbjct: 115 VLVKGGDWT 123


>gi|255323464|ref|ZP_05364595.1| bifunctional protein HldE [Campylobacter showae RM3277]
 gi|255299501|gb|EET78787.1| bifunctional protein HldE [Campylobacter showae RM3277]
          Length = 468

 Score = 36.7 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 28/117 (23%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           K  V   G FD +H GH   L +A +  +      NS  +V          ++  +    
Sbjct: 336 KRLVFTNGCFDILHAGHVSYLAKAREFGDILVVGLNSDASV--------RALKGDARPV- 386

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            +  + +  +L  +G    +    F       +    I     E L    ++ G  +
Sbjct: 387 -NSQTDRATVLAALGAVDYVTI--FDE----LTPLNLI-----EKLRPDVLVKGADY 431


>gi|268590597|ref|ZP_06124818.1| D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate
           adenosyltransferase [Providencia rettgeri DSM 1131]
 gi|291313987|gb|EFE54440.1| D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate
           adenosyltransferase [Providencia rettgeri DSM 1131]
          Length = 475

 Score = 36.7 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 27/161 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H GH   L  A K+ +   + V S +   R  ++  +     +P   
Sbjct: 340 ERVVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNS-DASTRR-LKGETRPV--NPLEQ 395

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  +L  +G    ++           + ++ I +VL + L     + G  +R  ++ AG 
Sbjct: 396 RMTVLGALGAVDWVV------AFEEDTPQRLIAEVLPDIL-----VKGGDYR-PEEIAGS 443

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             +        G     +     N    +S++NI   + K 
Sbjct: 444 AEVWAA-----GGEVKVL-----NFEDGISTTNIIKNIMKT 474


>gi|148358603|ref|YP_001249810.1| pantoate-beta-alanine ligase [Legionella pneumophila str. Corby]
 gi|296108308|ref|YP_003620009.1| pantoate--beta-alanine ligase [Legionella pneumophila 2300/99
          Alcoy]
 gi|166216328|sp|A5IAR4|PANC_LEGPC RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|148280376|gb|ABQ54464.1| pantoate-beta-alanine ligase [Legionella pneumophila str. Corby]
 gi|295650210|gb|ADG26057.1| pantoate--beta-alanine ligase [Legionella pneumophila 2300/99
          Alcoy]
          Length = 252

 Score = 36.7 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEI-----NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+       N   P+   G    +GN   +H GH  +    +  +  +  TV S 
Sbjct: 1  MQIFHNLNEWIRFRNTLSPDLSLGFAPTMGN---LHAGHASLF---LASSKENHYTVSSL 54

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P                    +++ + G    I 
Sbjct: 55 FVNPTQFNNPDDYKHYPRTVDADLELMTQNGVDFCIL 91


>gi|312622531|ref|YP_004024144.1| hypothetical protein Calkro_1469 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202998|gb|ADQ46325.1| protein of unknown function DUF795 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 400

 Score = 36.7 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPIT-VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L++  +I N   +  V+S        IQ   P         +  IL   G  
Sbjct: 13  FHNGHLYHLQKTREITNADIVVGVMS-----GNFIQRGEPAIVNKWARTKMAILN--GVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEK 146
            +    F    A  SAE F      ++  L V  ++ G++        GD   L++  + 
Sbjct: 66  VIFELPF--AYACNSAEIFAYGAISILNQLGVDFIVFGSEC-------GDIDKLKETAKH 116

Query: 147 YGFH 150
             F 
Sbjct: 117 LAFE 120


>gi|256842913|ref|ZP_05548401.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|293381234|ref|ZP_06627241.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           214-1]
 gi|312977565|ref|ZP_07789312.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           CTV-05]
 gi|256614333|gb|EEU19534.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|290922202|gb|EFD99197.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           214-1]
 gi|310895304|gb|EFQ44371.1| pantetheine-phosphate adenylyltransferase [Lactobacillus crispatus
           CTV-05]
          Length = 161

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH    ++A +I +   +  ++           ++    L  P  +  ++  
Sbjct: 8   GSFDPITNGHVETAKKAAEIFDKVYVVAMT-----------NTAKKYLFTPEERADLIR- 55

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
               AL      +E      E  +   L   L  K ++ G      FR+ ++ AG     
Sbjct: 56  ---DALREIP-NIEVLERPEEVTVN--LAHELHAKVMVRGVRNSADFRYEQEIAG----- 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               +K       +    + ++  V+SS I+  
Sbjct: 105 --INKKLAPDVNTVLLFTSPENSFVASSMIKEL 135


>gi|255014882|ref|ZP_05287008.1| glycerol-3-phosphate cytidyltransferase [Bacteroides sp. 2_1_7]
 gi|256840774|ref|ZP_05546282.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides sp. D13]
 gi|298376599|ref|ZP_06986554.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 3_1_19]
 gi|301309855|ref|ZP_07215794.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 20_3]
 gi|256738046|gb|EEU51372.1| glycerol-3-phosphate cytidylyltransferase [Parabacteroides sp. D13]
 gi|298266477|gb|EFI08135.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 3_1_19]
 gi|300831429|gb|EFK62060.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides sp. 20_3]
          Length = 139

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 24/152 (15%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL++A ++ +   + V +       +++       +     ++ I+
Sbjct: 11  TSGVFDMFHIGHLNILKRAKELCDFLIVGVST-----DELVREYKHKSPIISYDNRKAIV 65

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
           E   +   +  +   +    SA           L    +  G  +            ++ 
Sbjct: 66  EACKYVDKVVPQVNRD--KMSAYH--------RLHFDVMFVGDDW----KGNSLFQEVEA 111

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              K G   V+        ++ +SS+ +R  L
Sbjct: 112 ELNKNGAKVVYFP-----YTKGISSTILRDKL 138


>gi|190406356|gb|EDV09623.1| pantothenate synthase [Saccharomyces cerevisiae RM11-1a]
          Length = 309

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1  MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
          M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 1  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 54

Query: 52 VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
          V+S   +P     +              K+LE +    L 
Sbjct: 55 VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 94


>gi|52842868|ref|YP_096667.1| pantoate-beta-alanine ligase [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|81603187|sp|Q5ZS57|PANC_LEGPH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|52629979|gb|AAU28720.1| pantoate-beta-alanine ligase [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
          Length = 252

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 11/97 (11%)

Query: 1  MHVFHNIEI-----NQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
          M +FHN+       N   P+   G    +GN   +H GH  +    +  +  +  TV S 
Sbjct: 1  MQIFHNLNEWIHFRNTLSPDLSLGFAPTMGN---LHAGHASLF---LASSKENHYTVSSL 54

Query: 56 NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
            +P                    +++ + G    I 
Sbjct: 55 FVNPTQFNNPDDYKHYPRTVDADLELMTQNGVDFCIL 91


>gi|15611077|ref|NP_222728.1| pantoate--beta-alanine ligase [Helicobacter pylori J99]
 gi|8134632|sp|Q9ZN52|PANC_HELPJ RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|4154509|gb|AAD05590.1| PANTOATE--BETA-ALANINE LIGASE [Helicobacter pylori J99]
          Length = 276

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 1   MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M     I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1   MRALETIATLREYRKSLKESVGFVPTMG---ALHRGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
           +P     +        P      + EK G +A+    F  +       +  Q++ +
Sbjct: 55  NPTQFGANEDFSAYPRPLEKDLALCEKSGVNAV----FAPKIGEMYPYEAKQRLKL 106


>gi|308048281|ref|YP_003911847.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase ;D-beta-D-heptose
           1-phosphate adenylyltransferase [Ferrimonas balearica
           DSM 9799]
 gi|307630471|gb|ADN74773.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase ;D-beta-D-heptose
           1-phosphate adenylyltransferase [Ferrimonas balearica
           DSM 9799]
          Length = 474

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 64/159 (40%), Gaps = 27/159 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   LEQA ++ +   I  ++ +   R +  +S P+   +    + +
Sbjct: 342 VMTNGCFDILHAGHVGYLEQARRLGDRL-IVAVNDDDSVRRLKGASRPV---NGVEQRMR 397

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +L  +G    ++   F+ +    + ++ I  VL   L     + G  ++   + AG + +
Sbjct: 398 VLAALGAVDWVV--PFSED----TPQRLIGAVLPNLL-----VKGGDYQV-HEIAGHKEV 445

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           L       G     +          +S+S I   + K  
Sbjct: 446 L-----ANGGEVRIL-----GFEDGLSTSAIINTIRKAD 474


>gi|242310518|ref|ZP_04809673.1| nicotinate nucleotide adenylyltransferase [Helicobacter pullorum
           MIT 98-5489]
 gi|239522916|gb|EEQ62782.1| nicotinate nucleotide adenylyltransferase [Helicobacter pullorum
           MIT 98-5489]
          Length = 200

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 27/169 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  HLGH  I++   +      + V+     P   +         SP   + + L+ 
Sbjct: 9   GSFDPPHLGHLEIIQSVFRFLTIEKLFVV-----P-AFLNPFKTHSLFSPQK-RLEWLKI 61

Query: 85  MGFSALI---RYKFTLETANYSAEQFIQKVLVEWLEVK--TVITGTKFRFGKDRAGDRGI 139
           +     +      F +     +      K +    + +   +I G       +       
Sbjct: 62  LTQDMPLPIEILDFEINQNKPTPTIETIKFIQRTYKPQKIYLILGAD-----NLKNLTKW 116

Query: 140 LQKRGEKYGFHTVFIDELRNN----------KSQIVSSSNIRTALTKGH 178
            Q +  K     V I                +   +SS+ I+  L    
Sbjct: 117 HQYKNLKNQVEFVIIPRAHYKIDSKYQALPVEKIPISSTQIKEMLDNQD 165


>gi|217976849|ref|YP_002360996.1| rfaE bifunctional protein [Methylocella silvestris BL2]
 gi|217502225|gb|ACK49634.1| rfaE bifunctional protein [Methylocella silvestris BL2]
          Length = 485

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 16/108 (14%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           VA G FD +H GH  +++QA    +   I  L+ +   R +   + PI        +  +
Sbjct: 354 VANGCFDLLHPGHISLIKQAAASCDRL-IMALNSDASVRRLKGPTRPIQ---DEESRAAV 409

Query: 82  LEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  + G SA++ +                  L++ L+   ++ G  + 
Sbjct: 410 IGALKGVSAVVLFDEDTPF-----------NLIKALQPDILVKGADYS 446


>gi|229549550|ref|ZP_04438275.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255972251|ref|ZP_05422837.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T1]
 gi|256956559|ref|ZP_05560730.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           DS5]
 gi|257079484|ref|ZP_05573845.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           JH1]
 gi|257084750|ref|ZP_05579111.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           Fly1]
 gi|294780387|ref|ZP_06745756.1| putative glycerol-3-phosphate cytidylyltransferase [Enterococcus
           faecalis PC1.1]
 gi|307270201|ref|ZP_07551514.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX4248]
 gi|307287364|ref|ZP_07567425.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0109]
 gi|312951153|ref|ZP_07770056.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0102]
 gi|229305215|gb|EEN71211.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255963269|gb|EET95745.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           T1]
 gi|256947055|gb|EEU63687.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           DS5]
 gi|256987514|gb|EEU74816.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           JH1]
 gi|256992780|gb|EEU80082.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           Fly1]
 gi|294452651|gb|EFG21084.1| putative glycerol-3-phosphate cytidylyltransferase [Enterococcus
           faecalis PC1.1]
 gi|306501605|gb|EFM70900.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0109]
 gi|306513417|gb|EFM82036.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX4248]
 gi|310630818|gb|EFQ14101.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0102]
 gi|315034738|gb|EFT46670.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0027]
 gi|315146207|gb|EFT90223.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX4244]
 gi|315152639|gb|EFT96655.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0031]
 gi|315159513|gb|EFU03530.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX0312]
 gi|315164688|gb|EFU08705.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1302]
 gi|327535565|gb|AEA94399.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           OG1RF]
 gi|329568399|gb|EGG50208.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           TX1467]
          Length = 133

 Score = 36.7 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS--FNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G FD +H GH  +L++A    +   + + +  FN      + S   +   S    +
Sbjct: 4   VITYGTFDLLHYGHVNLLKRAKSKGDYLIVGLSTDEFN------LNSKDKVCYFS-YEER 56

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKV-LVEWLEVKTVITGTKFRFGKDRAGDR 137
           + ILE  G   +              E + QKV  ++  ++ T + G  +       G  
Sbjct: 57  KSILE--GIRYVDLV--------IPEENWDQKVKDMKLYDIDTFVMGNDW------EGKF 100

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
             L    E+ G    +++     ++  +S++ I+  L  
Sbjct: 101 DYLA---EETGVEVAYLE-----RTPEISTTQIKKELKD 131


>gi|320100469|ref|YP_004176061.1| cytidyltransferase-like domain-containing protein [Desulfurococcus
           mucosus DSM 2162]
 gi|319752821|gb|ADV64579.1| cytidyltransferase-related domain protein [Desulfurococcus mucosus
           DSM 2162]
          Length = 236

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 32/160 (20%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS----FNPHPRTIIQSSSPIFTLS 73
           +  V+  G+F+ +H GH  +L +A ++       V+S    F        +   P+    
Sbjct: 98  RPRVLVAGSFELLHPGHIHLLRRAWEL--GRVYVVVSRDSNFER-----FKGRRPVV--- 147

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETANY-SAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
               ++++        +         A     E F++ +  E L+   V+ G        
Sbjct: 148 --GEKDRLTVVENVRYV-------SKAVLGDEEDFLKPL--EELKPDIVLLGPDQWISPG 196

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                  L+K  E+ G   V +++L +   +  SS  I  
Sbjct: 197 E------LKKLLEERGLSRVRVEKLESRIGEWSSSGIIEK 230


>gi|308185088|ref|YP_003929221.1| hypothetical protein HPSJM_06700 [Helicobacter pylori SJM180]
 gi|308061008|gb|ADO02904.1| hypothetical protein HPSJM_06700 [Helicobacter pylori SJM180]
          Length = 171

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
           G+FD +H  H  I++Q +++     + VL     P            L   +     E+ 
Sbjct: 15  GSFDPLHKAHLAIIDQTLELLPFVQLIVL-----P-AYQNPFKKPCFLDAQTRFKELERA 68

Query: 82  LEKMGFSALIRYKFT--LETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           L+  G   ++   F    E A  + E  +    +   +   ++ G           +   
Sbjct: 69  LK--GMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNATE 126

Query: 140 LQKRGEKYGFHTVFIDELRNNK--------SQIVSSSNIRTAL 174
           L KR E   F  +  +E++              +SSS IR +L
Sbjct: 127 LLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSTIRASL 169


>gi|302039581|ref|YP_003799903.1| d-beta-d-heptose 1-phosphate adenosyltransferase [Candidatus
          Nitrospira defluvii]
 gi|300607645|emb|CBK43978.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Candidatus
          Nitrospira defluvii]
          Length = 160

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
          V   G FD +H+GH   L+ A  +     + V S +   R + + +     + P + + +
Sbjct: 26 VFTNGCFDLMHIGHTRYLQAARDLGEALVVGVNS-DESVRALNKGTDRP--IVPDTQRAE 82

Query: 81 ILEKMG-FSALIRY 93
          +L  +     ++ +
Sbjct: 83 VLAALACVDYVVIF 96


>gi|227357320|ref|ZP_03841677.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Proteus mirabilis ATCC 29906]
 gi|227162583|gb|EEI47572.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Proteus mirabilis ATCC 29906]
          Length = 489

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 41/165 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V+  G FD +H GH   L  A K+ +   + V            S +    L       +
Sbjct: 358 VMTNGCFDILHAGHVSYLANARKLGDRLIVAV-----------NSDASTKRLKGESRPVN 406

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           P   +  +L  +G    ++           + ++ I  VL + L     + G  ++  +D
Sbjct: 407 PLEQRMTVLGALGAVDWVV------AFEEDTPQRLIASVLPDIL-----VKGGDYK-PED 454

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            AG + +        G     +     N    +S++NI  A+ K 
Sbjct: 455 IAGSKEVWAA-----GGEVKVL-----NFEDGISTTNIINAIKKK 489


>gi|320105459|ref|YP_004181049.1| pantoate/beta-alanine ligase [Terriglobus saanensis SP1PR4]
 gi|319923980|gb|ADV81055.1| pantoate/beta-alanine ligase [Terriglobus saanensis SP1PR4]
          Length = 286

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 45/173 (26%), Gaps = 31/173 (17%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A +         +S   +P     S               +L K G   
Sbjct: 35  LHDGHLALVRAAKERCR---FVAVSIFVNPLQFGPSEDFSHYPRTFDQDCTLLLKEGVDL 91

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK-------------TVITGTKFR-------- 128
           +    F               + V  +  +             T I G  F         
Sbjct: 92  V----FAPAAEELVPAHATTFIQVGGIGDRLDGKSRPGHFRGVTTIVGKLFHVVAPHAAF 147

Query: 129 FGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALTKGHV 179
           FG+  A    +L+       F    V    +R      +SS N R    +  +
Sbjct: 148 FGQKDAAQVAVLRAMVRDLNFDLDLVVCPTVREPDGLALSSRN-RYLSAEERI 199


>gi|226327169|ref|ZP_03802687.1| hypothetical protein PROPEN_01034 [Proteus penneri ATCC 35198]
 gi|225204387|gb|EEG86741.1| hypothetical protein PROPEN_01034 [Proteus penneri ATCC 35198]
          Length = 489

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 41/165 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V+  G FD +H GH   L  A K+ +   + V            S +    L       +
Sbjct: 358 VMTNGCFDILHAGHVSYLANARKLGDRLIVAV-----------NSDASTKRLKGETRPVN 406

Query: 74  PPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKD 132
           P   +  +L  +G    ++           + ++ I  VL + L     + G  ++  +D
Sbjct: 407 PLEQRMTVLGALGAVDWVV------AFEEDTPQRLIASVLPDIL-----VKGGDYK-PED 454

Query: 133 RAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            AG + +        G     +     N    +S++NI  A+ K 
Sbjct: 455 IAGSKEVWAA-----GGEVKVL-----NFEDGISTTNIINAIKKK 489


>gi|302189878|ref|ZP_07266551.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. syringae
           642]
          Length = 473

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 27/167 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA  + +   + V        ++ +   P  
Sbjct: 332 DDARAHKERIVFTNGCFDILHAGHVTYLEQARALGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVISFP------EGTPENLLTHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           G D+     I+Q     YG     +  + N+     S++ I   +  
Sbjct: 435 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKIRA 472


>gi|145596792|ref|YP_001161089.1| pantoate--beta-alanine ligase [Salinispora tropica CNB-440]
 gi|189036431|sp|A4XCQ4|PANC_SALTO RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|145306129|gb|ABP56711.1| pantothenate synthetase [Salinispora tropica CNB-440]
          Length = 282

 Score = 36.7 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-SPPSI 77
          G V+ +G    +H GH  +L  A + A+N    V++   +P               P   
Sbjct: 23 GVVMTMG---ALHSGHETLLRAAREQADN---VVVTIFVNPLQ-FGPDEDFDRYPRPLDE 75

Query: 78 QEKILEKMGFSALI 91
            +I  + G + + 
Sbjct: 76 DLEICRRAGAAVVF 89


>gi|262277123|ref|ZP_06054916.1| pantoate--beta-alanine ligase [alpha proteobacterium HIMB114]
 gi|262224226|gb|EEY74685.1| pantoate--beta-alanine ligase [alpha proteobacterium HIMB114]
          Length = 267

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 1   MHVFH-NIEINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M +   + EIN    N  K G V  +G+   +H GH  +++++I       ITV+S   +
Sbjct: 1   MKIIKKSKEINLLFKNIKKSGFVPTMGS---LHKGHEYLIKKSITENK---ITVVSIFLN 54

Query: 59  PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100
           P+     +         +   +I +K+  + L    F    +
Sbjct: 55  PKQFNNKNDFKKYPKKINDDIRICKKLKVNYLFIPSFNEIYS 96


>gi|289207488|ref|YP_003459554.1| rfaE bifunctional protein [Thioalkalivibrio sp. K90mix]
 gi|288943119|gb|ADC70818.1| rfaE bifunctional protein [Thioalkalivibrio sp. K90mix]
          Length = 477

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 16  HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPP 75
           H +  V+  G FD +H GH   LE+A  + +   I  ++ +   R +     P+   +P 
Sbjct: 338 HGERIVMTNGCFDLLHAGHVAYLERARSLGDRL-IVAVNDDDSVRRLKGEGRPV---NPV 393

Query: 76  SIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
             +  +L  +     ++   F+ +    +  + I +VL + L     + G  +R
Sbjct: 394 EQRMAVLAGLASVDWVV--PFSED----TPARLIGEVLPDRL-----VKGGDYR 436


>gi|315231558|ref|YP_004071994.1| phosphopantetheine adenylyltransferase, type II [Thermococcus
           barophilus MP]
 gi|315184586|gb|ADT84771.1| phosphopantetheine adenylyltransferase, type II [Thermococcus
           barophilus MP]
          Length = 155

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 26/162 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           VV  G FD +HLGH  +L +A ++     I  L+ +   +    +   +          K
Sbjct: 7   VVVGGTFDRLHLGHKALLRKAFEVGKYVYIG-LTSDEMIKNKPYAEKILPYELRLKDLIK 65

Query: 81  ILEKMGFSALIRYK------FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
             E  G+      K      F  +  +  A    ++     L V             ++A
Sbjct: 66  FFEVNGYKNYRIIKIHNAIGFADKLKSLDAIVVSEETYKGALIV-------------NKA 112

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            +   L+          V I  +++     +SSS IR  L  
Sbjct: 113 REEKGLKPL------KIVKIGIIKSKLGCKISSSLIRAGLID 148


>gi|329667748|gb|AEB93696.1| hypothetical protein LJP_1374c [Lactobacillus johnsonii DPC 6026]
          Length = 385

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 30  IHLGHHLILEQAIKIANNSPI-TVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH  ++ QA   A N PI  V+S        +Q       +     + K     G  
Sbjct: 13  FHSGHEFLMNQARLAAKNDPIIVVMS-----GNYVQRGQ--MAIMDKWHRAKAALASGAD 65

Query: 89  ALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
            +    F    A   A+ F      ++  L V  +  G
Sbjct: 66  LVFELPF--SFAVQPADIFANGSIKMLSDLGVSELFFG 101


>gi|326573931|gb|EGE23881.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis O35E]
          Length = 342

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 25/156 (16%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT----LSPPSIQE 79
           IG F+  H GHH ++ QA+  A    I ++     PRTI     P       L+    + 
Sbjct: 13  IGRFEPFHQGHHYVITQALAHARQV-IVLMGSANSPRTIKNPFHPDERQAMILNSFDKKN 71

Query: 80  K-ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +  +G   A               +  I  +       +  I G        +    
Sbjct: 72  RERIHCLGINDATY----NDNKWLIEVQNAIVSITANTPNERIGIIGHD------KDESS 121

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L    +   F             + +S++ IR A
Sbjct: 122 YYLALFPQYKTFMV--------KNFEYISATPIREA 149


>gi|325068351|ref|ZP_08127024.1| GNAT family protein [Actinomyces oris K20]
          Length = 139

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 34/108 (31%), Gaps = 17/108 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G+FD +H GH  +L +A  + +   + + +          S       S    +  
Sbjct: 4   IITYGSFDLLHYGHIELLRRAKAMGDYLIVALST-----DEFSASKGKRAYFSYEQRKAM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQK-VLVEWLEVKTVITGTKF 127
           +        ++               + QK   ++   +   + G  +
Sbjct: 59  LEAVRYVDMVV-----------PERTWGQKSQDIDEYGIDLFVIGDDW 95


>gi|304384692|ref|ZP_07367038.1| nucleotidyltransferase [Pediococcus acidilactici DSM 20284]
 gi|304328886|gb|EFL96106.1| nucleotidyltransferase [Pediococcus acidilactici DSM 20284]
          Length = 371

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 10/108 (9%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
                I  F+  H GH  +L+ A K +    + V+         +Q   P   L     +
Sbjct: 2   RACAVIAEFNPFHNGHQYLLKTARKTSQADVMIVI----MSGNFVQRGEPA--LINKWER 55

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
             +  + G   ++        A   A  F Q    + +WL    +  G
Sbjct: 56  AAVALQSGADLVVEMPTEYAVAA--ARDFAQAGVQIAQWLRADALAFG 101


>gi|291450067|ref|ZP_06589457.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291353016|gb|EFE79918.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 164

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           FD +H+GH   L    +     P+ V +  +   R     + P     P   + ++L  +
Sbjct: 33  FDLLHVGHVRFLAAVRE--RGLPLLVGVEDDRRTRGWKGPARPFQ---PEEERAELLRAL 87

Query: 86  -GFSALIRYKFTLETANYSA 104
                            ++A
Sbjct: 88  RPVDGTFLVHGDPSVTEWTA 107


>gi|270290427|ref|ZP_06196652.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|270281208|gb|EFA27041.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
          Length = 371

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 10/108 (9%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
                I  F+  H GH  +L+ A K +    + V+         +Q   P   L     +
Sbjct: 2   RACAVIAEFNPFHNGHQYLLKTARKTSQADVMIVI----MSGNFVQRGEPA--LINKWER 55

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITG 124
             +  + G   ++        A   A  F Q    + +WL    +  G
Sbjct: 56  AAVALQSGADLVVEMPTEYAVAA--ARDFAQAGVQIAQWLRADALAFG 101


>gi|229058276|ref|ZP_04196663.1| Pantothenate synthetase [Bacillus cereus AH603]
 gi|228720047|gb|EEL71633.1| Pantothenate synthetase [Bacillus cereus AH603]
          Length = 282

 Score = 36.7 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 74/238 (31%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   ++  Q + N L+      G V  +G    +H GH  +L +A +      I VLS
Sbjct: 1   MKIITTVQEMQQVTNELRTSGKSIGFVPTMGY---LHEGHATLLRKAREENE---IVVLS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEK-ILEKMGFSALIRYKFTLETANYSAEQFIQKVLV 113
              +P      +  +        +++ + ++ G   L    F          +  Q   V
Sbjct: 55  VFVNPLQ-FGPNEDLDRYPRDIDRDENVAKENGVDYL----FYPSVEEMYPAE--QTTTV 107

Query: 114 EWLEVKTVITG-----------------TKFRFGKDRAGDRGILQKRGEKYGFHT----- 151
           E ++   V+ G                                 Q+     GF T     
Sbjct: 108 EVVKRTDVLCGKQRPGHFAGVATVLMKLFNITLPTRAYFGMKDAQQLAVIEGFVTDFNIP 167

Query: 152 ---VFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              V +D +R       SS N+  +L +     A HL       +  +  GE+    +
Sbjct: 168 VTIVPVDIVREEDGLAKSSRNVYLSLEER--EEAPHLYRSLCIAKERIEAGERNPEII 223


>gi|326693247|ref|ZP_08230252.1| hypothetical protein LargK3_05875 [Leuconostoc argentinum KCTC
           3773]
          Length = 403

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 34/193 (17%)

Query: 30  IHLGHHLILEQAIKIA-NNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   ++QA  +   +  + V+S        +Q   P  TL     + +   + G  
Sbjct: 13  FHNGHRYHIQQAKAVTGADVVVAVMS-----GNFVQRGEP--TLFDKWTRAQTALENGVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
            +I                  +  V  L    +       FG + A D   L+   +   
Sbjct: 66  LVIELP---TFYAVQPSHIFAEGAVRLLSAMGI---KDMVFGSEHA-DVDFLKLAEQA-- 116

Query: 149 FHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTLGF 208
                   + +             A  + +   A             V+         G+
Sbjct: 117 ------PSVESGH-----------AFQEKNQTFAHAYATQLAEETGFVLEDPNDILAFGY 159

Query: 209 PTANMQLSPDILL 221
             A ++L  D+ L
Sbjct: 160 AKAVIKLGVDMTL 172


>gi|255020681|ref|ZP_05292743.1| Phosphopantetheine adenylyltransferase [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969917|gb|EET27417.1| Phosphopantetheine adenylyltransferase [Acidithiobacillus caldus
           ATCC 51756]
          Length = 176

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD + LGH  +  +A  + +   + V            + +P  T+ P + +  + E 
Sbjct: 13  GTFDPVTLGHEDLARRAAALFDEVVVAV-----------AAQTPKKTIFPLAERVALAEA 61

Query: 85  -MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            +G    +    F     +  AE+    +L+  L   +        F  +       L  
Sbjct: 62  TLGRIDKVRVRAFDGLLVHLLAEEQTP-ILLRGLRAIS-------DFEHEFQ-----LAS 108

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
              +   H   +  + ++    +SSS +R  
Sbjct: 109 INRRMDAHIETLFLMTSDAYTFLSSSLVREI 139


>gi|303247904|ref|ZP_07334172.1| RfaE bifunctional protein [Desulfovibrio fructosovorans JJ]
 gi|302490805|gb|EFL50706.1| RfaE bifunctional protein [Desulfovibrio fructosovorans JJ]
          Length = 500

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 28/122 (22%)

Query: 25  GNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G FD +H GH  +L+ A +  +      NS  +V       R +   + P+      + +
Sbjct: 367 GCFDLLHPGHAAMLDGARRECDRLIVGLNSDASV-------RRLKGPTRPVQ---DEAAR 416

Query: 79  EKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLE-----VKTVITGTKFRFGKD 132
            ++L  +    A++   F  +    +  + I+ V  + L          + G     G  
Sbjct: 417 ARMLASLASVDAVVI--FDED----TPLELIKAVRPDMLAKGGDYTLETVVGADVVTGYG 470

Query: 133 RA 134
             
Sbjct: 471 GR 472


>gi|217033015|ref|ZP_03438486.1| hypothetical protein HPB128_151g11 [Helicobacter pylori B128]
 gi|216945272|gb|EEC23950.1| hypothetical protein HPB128_151g11 [Helicobacter pylori B128]
          Length = 463

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++ ++L ++ +  V   G FD +H GH   L++A  + +   I  L+ +   +  ++   
Sbjct: 320 KLLETLEHNQQKIVFTNGCFDLLHKGHASYLQKAKALGDIL-IVGLNSDNSIKR-LKGDK 377

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
               +     +  +L  +     ++ ++                 L++ L    ++ G  
Sbjct: 378 RP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALRPDILVKGAD 424

Query: 127 F 127
           +
Sbjct: 425 Y 425


>gi|324990737|gb|EGC22673.1| hypothetical protein HMPREF9388_1246 [Streptococcus sanguinis
           SK353]
          Length = 366

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 16/95 (16%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +LEQA        I V+S        +Q   P   +     + ++  + G
Sbjct: 10  FNPFHNGHKYLLEQAS----GLKIIVMS-----GNFVQRGEPA--IVDKWTRAQMALEAG 58

Query: 87  FSALIRYKF-----TLETANYSAEQFIQKVLVEWL 116
              ++   F       +     A   ++++ +E L
Sbjct: 59  ADLVLELPFLVSVQAADFFAKGAVDILERLGIEQL 93


>gi|298736562|ref|YP_003729088.1| bifunctional protein HldE [Helicobacter pylori B8]
 gi|298355752|emb|CBI66624.1| Bifunctional protein hldE [Helicobacter pylori B8]
          Length = 465

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++ ++L ++ +  V   G FD +H GH   L++A  + +   I  L+ +   +  ++   
Sbjct: 322 KLLETLEHNQQKIVFTNGCFDLLHKGHASYLQKAKALGDIL-IVGLNSDNSIKR-LKGDK 379

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
               +     +  +L  +     ++ ++                 L++ L    ++ G  
Sbjct: 380 RP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALRPDILVKGAD 426

Query: 127 F 127
           +
Sbjct: 427 Y 427


>gi|206603477|gb|EDZ39957.1| Cytidylyltransferase family protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 179

 Score = 36.7 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 5   HNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQ 64
           H +E  +++    +  V   G FD +H GH  +LE+A +  +   + + +      ++  
Sbjct: 21  HLLERVKAIRLSGQKIVFTNGCFDLVHAGHIEVLEKAREAGDFLIVALNTD----LSVQG 76

Query: 65  SSSPIFTLSPPSIQEKILEKMG-FSAL 90
              P   L   S + +++  +    A+
Sbjct: 77  LKGPNRPLVTESRRARVIGALACVDAV 103


>gi|302421866|ref|XP_003008763.1| choline-phosphate cytidylyltransferase [Verticillium albo-atrum
           VaMs.102]
 gi|261351909|gb|EEY14337.1| choline-phosphate cytidylyltransferase [Verticillium albo-atrum
           VaMs.102]
          Length = 476

 Score = 36.7 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 33/210 (15%)

Query: 3   VFHNIEINQSLPNHLKGG-VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPR 60
           + H +    + P   +   V A G FD  HLGH   LEQA K   N+ + V ++ +    
Sbjct: 134 IVHPVGFRTNDPPVGRPVRVYADGVFDLFHLGHMRQLEQAKKTFPNTYLLVGVTGD---- 189

Query: 61  TIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            +        T+   + + + L        +I               +I  V  E+LE  
Sbjct: 190 -VETHKRKGLTVLSGNERAETLRHCKWVDEVI-----------DNCPWI--VTTEFLEKH 235

Query: 120 TV--ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSS-NIRTALTK 176
            +  +      +G D  GD  I +   E+  F           +++ VS++  I   +  
Sbjct: 236 QIDYVAHDDLPYGAD-EGD-DIYKPIKEQGKFLVTQ-------RTEGVSTTGIITKIVRD 286

Query: 177 GHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                A          E +V   +K    L
Sbjct: 287 YEKYIARQFKRGASRQELNVSWLKKNELDL 316


>gi|153947382|ref|YP_001402446.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|152958877|gb|ABS46338.1| nicotinamide-nucleotide adenylyltransferase [Yersinia
           pseudotuberculosis IP 31758]
          Length = 423

 Score = 36.7 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKIGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + +  ++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKAFMNEKGIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPRYREQLGIETILIDPQRSF--MNISGRQIRR 213


>gi|330951437|gb|EGH51697.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae Cit 7]
          Length = 473

 Score = 36.7 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 27/167 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA  + +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKIVFTNGCFDILHAGHVTYLEQARALGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVISFP------EGTPENLLTHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           G D+     I+Q     YG     +  + N+     S++ I   +  
Sbjct: 435 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKIRA 472


>gi|255561104|ref|XP_002521564.1| syntaxin, putative [Ricinus communis]
 gi|223539242|gb|EEF40835.1| syntaxin, putative [Ricinus communis]
          Length = 493

 Score = 36.7 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 11/101 (10%)

Query: 1   MHVFHNIEINQSL-PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
           M V     +N  + P +  G VV  G FD +H GH L L+ + ++A    +  +   P  
Sbjct: 1   MAVLEEPMVNHKISPPNSYGAVVLGGTFDRLHDGHRLFLKASAELARERIVVGVCDGPM- 59

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETA 100
              + +      + P   +   +E      +    F  E A
Sbjct: 60  ---LTNKQFADLIQPIEERMHNVE------IYIKSFKPELA 91


>gi|239917405|ref|YP_002956963.1| Phosphopantetheine adenylyltransferase [Micrococcus luteus NCTC
           2665]
 gi|281414110|ref|ZP_06245852.1| phosphopantetheine adenylyltransferase [Micrococcus luteus NCTC
           2665]
 gi|259491320|sp|C5CAE0|COAD_MICLC RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|239838612|gb|ACS30409.1| Phosphopantetheine adenylyltransferase [Micrococcus luteus NCTC
           2665]
          Length = 157

 Score = 36.7 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 26/154 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD +H GH  ++ +A  +     + V            ++           +  
Sbjct: 4   AVCPGSFDPLHKGHVEVIARAANLFEEVVVAV-----------SANPAKTYRFSVDERIA 52

Query: 81  ILEKM--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           ++E      + +             AE F +++  + + VK +  G    F         
Sbjct: 53  MIEATVSSLAGVAVRPMGP---GLLAE-FCRQIGADAI-VKGLRGGADLEF--------E 99

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                  ++      +    + +   VSSS I+ 
Sbjct: 100 APMAAMNRHLTGVETVYLPADARYTHVSSSLIKE 133


>gi|326431116|gb|EGD76686.1| phosphoethanolamine cytidylyltransferase [Salpingoeca sp. ATCC
           50818]
          Length = 377

 Score = 36.7 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 17/122 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V     H    I+ +           + +++  
Sbjct: 20  GCFDMMHFGHANALRQAKAMGDYLIVGV-----HSDEEIRKNKGPPV-MNEEERYEMVRA 73

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
                 ++            A    Q  +++       + G       D      +++  
Sbjct: 74  CKWVDEVVE----------DAPYVTQLDVLDKYNCDFCVHGDDITTAGDGQDAYHLVKAA 123

Query: 144 GE 145
             
Sbjct: 124 NR 125


>gi|254448345|ref|ZP_05061806.1| glycerol-3-phosphate cytidyltransferase [gamma proteobacterium
          HTCC5015]
 gi|198261958|gb|EDY86242.1| glycerol-3-phosphate cytidyltransferase [gamma proteobacterium
          HTCC5015]
          Length = 135

 Score = 36.7 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 18 KGGVVAIGNFDGIHLGHHLILEQAIKIANNS 48
          +  VV  G FD  H GH  ILE+A    +  
Sbjct: 3  QKTVVTFGTFDLFHYGHLKILERAAAYGDRL 33


>gi|257051800|ref|YP_003129633.1| cytidyltransferase-related domain protein [Halorhabdus utahensis
           DSM 12940]
 gi|327488399|sp|C7NTR1|RIBL_HALUD RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|256690563|gb|ACV10900.1| cytidyltransferase-related domain protein [Halorhabdus utahensis
           DSM 12940]
          Length = 142

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 28/163 (17%)

Query: 20  GVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQE 79
            VVA G FD +H GH   L +A  + +   + +       R  +    P   + P   + 
Sbjct: 3   TVVAQGTFDLLHPGHLHYLREAAGMGDQLHVILA-----RRENVTHKDPP--ILPNEQRR 55

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
           +++  +      I                   + VE ++   ++ G       DR GD  
Sbjct: 56  EMVAALDPVDEAIVGHDDDIF-----------IPVERIDPDLLVLGYDQH--HDR-GDIA 101

Query: 139 ILQKRGEKYGFHTVF--IDELRNNKSQIVSSS-NIRTALTKGH 178
                  + G   V     E        V S+  I   + +  
Sbjct: 102 D---ALAERGIDCVVRRASEYEPGYEGAVLSTGRIVERILETR 141


>gi|217034506|ref|ZP_03439917.1| hypothetical protein HP9810_873g22 [Helicobacter pylori 98-10]
 gi|216943047|gb|EEC22526.1| hypothetical protein HP9810_873g22 [Helicobacter pylori 98-10]
          Length = 463

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L +H +  V   G FD +H GH   L++A  + +      NS  +V         
Sbjct: 320 KLLETLEHHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASV--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVGEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|332671101|ref|YP_004454109.1| cytidyltransferase-related domain-containing protein [Cellulomonas
           fimi ATCC 484]
 gi|332340139|gb|AEE46722.1| cytidyltransferase-related domain protein [Cellulomonas fimi ATCC
           484]
          Length = 470

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G +D +H GH   L+ A ++ +   + +L+ +   R +   + P+      + + +
Sbjct: 340 VATGGCYDLLHAGHVATLQAARRLGDAL-VVLLNSDDSVRRLKGPTRPVV---DAADRAR 395

Query: 81  ILEKMG-FSALIRYKFT---LETANYSAEQFIQ 109
           +L  +    A++ +         A    + + +
Sbjct: 396 VLLALDCVDAVVVFDEDDPRAALARLRPDVWAK 428


>gi|219126738|ref|XP_002183607.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404844|gb|EEC44789.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 311

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P+   G V  +G    +H GH  ++ QA +  +   + V S   +P              
Sbjct: 36  PDTTIGLVPTMG---ALHEGHLALVRQARRDND---VVVASIFVNPAQFGPHEDLERYPR 89

Query: 74  PPSIQEKILEKMGFSALIRYKFTLETAN-----YSAEQFIQKVLVEWLEVKT-------- 120
             +   ++L  +G   ++     +            +  ++K                  
Sbjct: 90  QLAQDSRVLADLGVDHVLAPDADMVYGQHHTTYIDPQASLRKTAEGQSRPGHFRGVATIV 149

Query: 121 -----VITGTKFRFGKDRAGDRGILQKRGEKYGFHTV--FIDELRNNKSQIVSS 167
                ++  T   FG+  A    ++++  E          +D +R+     +SS
Sbjct: 150 TKLFNIVQPTNAYFGQKDAAQCVLIRRVTEDLNLDVTVHVLDTVRDADGLALSS 203


>gi|154335595|ref|XP_001564036.1| cholinephosphate cytidylyltransferase A [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061067|emb|CAM38088.1| putative cholinephosphate cytidylyltransferase A [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 586

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH L++  A+K  N   + V               P   +     +      
Sbjct: 439 GVFDLCHAGHKLLMANALKFGNRLIVGVCGDE----ECASYKRPP--IMTTEER------ 486

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              + +   ++  E    S    I   ++++  +  V+ G ++
Sbjct: 487 --INEVRLCRYVSEVIPNSPVTGITVEMIQYYNIHLVVCGEEY 527


>gi|24111576|ref|NP_706086.1| pantoate--beta-alanine ligase [Shigella flexneri 2a str. 301]
 gi|30061698|ref|NP_835869.1| pantoate--beta-alanine ligase [Shigella flexneri 2a str. 2457T]
 gi|110804193|ref|YP_687713.1| pantoate--beta-alanine ligase [Shigella flexneri 5 str. 8401]
 gi|78099059|sp|Q83SM0|PANC_SHIFL RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|123147280|sp|Q0T868|PANC_SHIF8 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|24050339|gb|AAN41793.1| pantothenate synthetase [Shigella flexneri 2a str. 301]
 gi|30039940|gb|AAP15674.1| pantothenate synthetase [Shigella flexneri 2a str. 2457T]
 gi|110613741|gb|ABF02408.1| pantothenate synthetase [Shigella flexneri 5 str. 8401]
 gi|281599494|gb|ADA72478.1| Pantothenate synthetase [Shigella flexneri 2002017]
 gi|313646482|gb|EFS10943.1| pantoate--beta-alanine ligase [Shigella flexneri 2a str. 2457T]
 gi|332762137|gb|EGJ92406.1| pantoate--beta-alanine ligase [Shigella flexneri 4343-70]
 gi|332762337|gb|EGJ92604.1| pantoate--beta-alanine ligase [Shigella flexneri 2747-71]
 gi|332764982|gb|EGJ95210.1| pantoate--beta-alanine ligase [Shigella flexneri K-671]
 gi|332768925|gb|EGJ99104.1| pantoate--beta-alanine ligase [Shigella flexneri 2930-71]
 gi|333009217|gb|EGK28673.1| pantoate--beta-alanine ligase [Shigella flexneri K-218]
 gi|333022348|gb|EGK41586.1| pantoate--beta-alanine ligase [Shigella flexneri K-304]
          Length = 283

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHNGHMKLVDEAKARAD---VVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            K     +    F                 V+   + T++ G   R G  R      +  
Sbjct: 83  NKRKVDLV----FAPSVKEIYPNGTETHTYVDVPGLSTMLEGA-SRPGHFR--GVSTIVS 135

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
           +     F+ V  D     +      + IR  +           +G+   I    I   K 
Sbjct: 136 KL----FNLVQPDIACFGEKDFQQLALIRKMVAD---------MGFDIEIVGVPIMRAKD 182

Query: 203 GRTL----GFPTANMQLSPDILLKEGVYAIRFRTQD 234
           G  L    G+ TA         +  G+Y +     D
Sbjct: 183 GLALSSRNGYLTA-----EQRKIAPGLYKVLSSIAD 213


>gi|127511593|ref|YP_001092790.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Shewanella loihica PV-4]
 gi|150383476|sp|A3QAN3|HLDE_SHELP RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|126636888|gb|ABO22531.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase [Shewanella
           loihica PV-4]
          Length = 476

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 41/169 (24%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----- 72
           +  V+  G FD +H GH   L+QA  + +   + V                +  L     
Sbjct: 341 ERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAV-----------NDDDSVKRLKGDGR 389

Query: 73  --SPPSIQEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
             +    +  +L  +     ++   F+ +    + ++ I ++L   L     + G  +  
Sbjct: 390 PVNKLDRRMAVLAGLASVDWVV--PFSED----TPQRIISRLLPNKL-----VKGGDYNV 438

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +D AG + ++       G     +          VS++ I   +    
Sbjct: 439 -EDIAGGKEVIAA-----GGSVEVL-----GFEDGVSTTAIIENIMAKQ 476


>gi|307706514|ref|ZP_07643321.1| macrolide-efflux protein [Streptococcus mitis SK321]
 gi|307617969|gb|EFN97129.1| macrolide-efflux protein [Streptococcus mitis SK321]
          Length = 66

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 49  PITVLSFNPHPRTIIQS--SSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQ 106
           PI V+ FN   +  ++   S     +   + +E+ L++ G   L    F+ +    + E 
Sbjct: 2   PIVVMMFNESLKIALEPYHSELFLHILNSAERERKLKREGVEELYLLDFSSQFDTITTED 61

Query: 107 F 107
           F
Sbjct: 62  F 62


>gi|294940799|ref|XP_002782885.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239895021|gb|EER14681.1| Ethanolamine-phosphate cytidylyltransferase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 366

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 17/122 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH+  + QA    +   + +     H  ++I              + ++L+ 
Sbjct: 25  GCFDIMHSGHYNAIRQAKAQCDILVVGI-----HSDSVITDRKAPPV-MKQRERYELLKH 78

Query: 85  MG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKR 143
           +     ++          Y A   I    +E       + G          G    L+  
Sbjct: 79  IKWVDEIL----------YDASYDIGLKTLEKARADFCVHGDDMPVDSSGKGVYDELRDA 128

Query: 144 GE 145
           G+
Sbjct: 129 GK 130


>gi|258654561|ref|YP_003203717.1| cytidyltransferase-related domain-containing protein [Nakamurella
           multipartita DSM 44233]
 gi|258557786|gb|ACV80728.1| cytidyltransferase-related domain protein [Nakamurella multipartita
           DSM 44233]
          Length = 152

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 30/155 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D  H+GH  IL  A    +     V+S        +    P   + P + + +I+  
Sbjct: 10  GVYDMFHIGHLNILRHAKSQCDYLIAGVVSDE---MCELAKGRPP--IVPQAERLEIVRH 64

Query: 85  MG-FSALI--RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
           +      I       ++T   +    I K             G  +R           L+
Sbjct: 65  ISFVDEAILEVVPDKVQTWRTTPFDLIFK-------------GDDWR----GTAKGERLE 107

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           +   + G   V+        +   SS+ +R AL+ 
Sbjct: 108 REFAEVGVEVVYFP-----YTVHTSSTLLRRALSA 137


>gi|66043804|ref|YP_233645.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. syringae
           B728a]
 gi|75503655|sp|Q4ZZ15|HLDE_PSEU2 RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|63254511|gb|AAY35607.1| Cytidyltransferase-related [Pseudomonas syringae pv. syringae
           B728a]
 gi|330972698|gb|EGH72764.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 474

 Score = 36.7 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA  + +   + V        ++ +   P  
Sbjct: 332 DDARAHKERIVFTNGCFDILHAGHVTYLEQARALGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSVERRMAVLAGLGAVDWVISFP------EGTPENLLTHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 435 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKI 470


>gi|296133582|ref|YP_003640829.1| protein of unknown function DUF795 [Thermincola sp. JR]
 gi|296032160|gb|ADG82928.1| protein of unknown function DUF795 [Thermincola potens JR]
          Length = 415

 Score = 36.7 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 30  IHLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
            H GH   L +A ++A     I V+S        +Q   P   L     + ++    G  
Sbjct: 13  FHNGHLFHLTKAKELAEAEYAIAVMS-----GHFLQRGEPA--LLDKWTRARMAIAAGVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
            ++   +    ++ SA  F     V  L    ++T     FG + AG+   L +    +
Sbjct: 66  LVLELPY--VFSSRSANAFACG-AVSILHGTGIVT--HLCFGSE-AGNIEPLAQIARLF 118


>gi|198276441|ref|ZP_03208972.1| hypothetical protein BACPLE_02636 [Bacteroides plebeius DSM 17135]
 gi|198270529|gb|EDY94799.1| hypothetical protein BACPLE_02636 [Bacteroides plebeius DSM 17135]
          Length = 281

 Score = 36.7 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 39/200 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   I   ++  +  +      G V  +G    +H GH  ++ +A+   +   + V+S
Sbjct: 1   MKLIQTISELRAELDAFRKEGKTIGLVPTMG---ALHAGHASLVNRAVAEND---VVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG--------FSALIRYKFTLETANYSAEQ 106
              +P      +  +           +LEK G           +     T + +      
Sbjct: 55  DFVNPTQFNDQNDLLKYPRTLEADCALLEKCGATLVFAPSVEEVYPEPDTRQFS----YA 110

Query: 107 FIQKVLVEWLEVKT-------------VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVF 153
            +  V+                     ++   +  FG+       I+++   KY F+   
Sbjct: 111 PLDTVMEGKYRPGHFNGVCQIVSKLFLMVEPDRAYFGEKDFQQLAIIREMVRKYPFNIQI 170

Query: 154 I--DELRNNKSQIVSSSNIR 171
           +    +R      +SS N R
Sbjct: 171 VGCPIVREEDGLALSSRNAR 190


>gi|326562193|gb|EGE12521.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis 7169]
          Length = 342

 Score = 36.7 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 25/156 (16%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT----LSPPSIQE 79
           IG F+  H GHH ++ QA+  A    I ++     PRTI     P       L+    + 
Sbjct: 13  IGRFEPFHQGHHYVIMQALAHARQV-IVLMGSANSPRTIKNPFHPNERQAMILNSFDKKN 71

Query: 80  K-ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +  +G   A               +  I  +       +  I G        +    
Sbjct: 72  RERIHCLGINDATY----NDNKWLIEVQNAIVSITANTPNERIGIIGHD------KDESS 121

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L    +   F             + +S++ IR A
Sbjct: 122 YYLALFPQYKTFMV--------KNFEYISATPIREA 149


>gi|225163907|ref|ZP_03726199.1| cytidyltransferase-related domain protein [Opitutaceae bacterium
           TAV2]
 gi|224801484|gb|EEG19788.1| cytidyltransferase-related domain protein [Opitutaceae bacterium
           TAV2]
          Length = 374

 Score = 36.7 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 58/205 (28%), Gaps = 40/205 (19%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G +D +H GH     +A  +   S +TV SF      ++       +  P   +  ++  
Sbjct: 8   GCYDILHAGHVQFFREARAL--GSHLTV-SFAS--SEVLWIHKHRKSSLPDEHKAALIAA 62

Query: 85  MG-FSALIR-------YKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +     ++          F  +      +               +      ++       
Sbjct: 63  LDMVDEVVIGRGHDEGIDFREDFLRLRPD--------------ILAVTEDDKYAP----- 103

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAA---HLLGYRFTIE 193
             + ++   + G   V + +    +   +S++ I   +       A       G    + 
Sbjct: 104 --LKRELCAQVGARYVVLPK-TPPQFTPISTTEIVRYIRA--PQEAPLRVDFAGGWLDVP 158

Query: 194 SDVIHGEKIGRTLGFPTANMQLSPD 218
                G  +      PT +++  P 
Sbjct: 159 MYARAGASVVNCAISPTVSLRSWPY 183


>gi|326572319|gb|EGE22314.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis BC8]
          Length = 342

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 25/156 (16%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT----LSPPSIQE 79
           IG F+  H GHH ++ QA+  A    I ++     PRTI     P       L+    + 
Sbjct: 13  IGRFEPFHQGHHYVITQALAHARQV-IVLMGSANSPRTIKNPFHPNERQAMILNSFDKKN 71

Query: 80  K-ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +  +G   A               +  I  +       +  I G        +    
Sbjct: 72  RERIHCLGINDATY----NDNKWLIEVQNAIVSITANTPNERIGIIGHD------KDESS 121

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L    +   F             + +S++ IR A
Sbjct: 122 YYLALFPQYKTFMV--------KNFEYISATPIREA 149


>gi|326568429|gb|EGE18509.1| bifunctional nicotinamide mononucleotide
           adenylyltransferase/ADP-ribose pyrophosphatase
           [Moraxella catarrhalis BC7]
          Length = 342

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 25/156 (16%)

Query: 24  IGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT----LSPPSIQE 79
           IG F+  H GHH ++ QA+  A    I ++     PRTI     P       L+    + 
Sbjct: 13  IGRFEPFHQGHHYVITQALAHARQV-IVLMGSANSPRTIKNPFHPNERQAMILNSFDKKN 71

Query: 80  K-ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
           +  +  +G   A               +  I  +       +  I G        +    
Sbjct: 72  RERIHCLGINDATY----NDNKWLIEVQNAIVSITANTPNERIGIIGHD------KDESS 121

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             L    +   F             + +S++ IR A
Sbjct: 122 YYLALFPQYKTFMV--------KNFEYISATPIREA 149


>gi|325690227|gb|EGD32231.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK115]
          Length = 164

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMTKGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +       E A   A +   +  V  L            +  +       +    
Sbjct: 61  QHLDNVEVITSQNELAVTVARRLGTQAFVRGLRNS-----QDLDYEAN-------MNFFN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
            +       I  L     Q +SSS IR  + 
Sbjct: 109 HELAGELETIFLLSKPDYQHISSSRIRELIA 139


>gi|222086419|ref|YP_002544953.1| pantoate--beta-alanine ligase [Agrobacterium radiobacter K84]
 gi|254778208|sp|B9JH26|PANC_AGRRK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|221723867|gb|ACM27023.1| pantoate--beta-alanine ligase [Agrobacterium radiobacter K84]
          Length = 291

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 10/99 (10%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  ++ +A    +   I V+S   +P     +             
Sbjct: 25  GLVPTMGY---LHAGHMELVSRARAEND---IVVVSIFVNPLQFGANEDLAKYPRDLERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLE 117
             IL       +    F    A+         V V  L 
Sbjct: 79  SAILRDGKVDFI----FAPGVADMYPRPMETVVDVPKLG 113


>gi|159897044|ref|YP_001543291.1| NAD metabolism ATPase/kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890083|gb|ABX03163.1| ATPase/kinase involved in NAD metabolism [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 334

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 36/158 (22%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +G F  +H GH L++E A+       I +              SP  T  P  ++   
Sbjct: 4   LTLGKFAPLHKGHQLMIETALSEVAELQIIIY------------DSPEQTSVPLPVRSAW 51

Query: 82  LEKM--------GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           L ++         +        T E      +Q  +  +++ L +  +       +  + 
Sbjct: 52  LRELYPQAQVIEAWDGPSVIGNTREI-----QQLHEDYVIQQLGISNIS----HFYSSEF 102

Query: 134 AGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIR 171
            G     +   +  G     +D  RN     +S++ IR
Sbjct: 103 YG-----EHMSQALGAINRQVDPPRN--QVPISATQIR 133


>gi|269217005|ref|ZP_06160859.1| pantoate--beta-alanine ligase [Slackia exigua ATCC 700122]
 gi|269129544|gb|EEZ60628.1| pantoate--beta-alanine ligase [Slackia exigua ATCC 700122]
          Length = 318

 Score = 36.7 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 30/194 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGG------VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +   +E  +++    +        V  +G    +H GH  ++E+A +  +   ++V  
Sbjct: 36  MQIARTVEDAKAIARAWRRAGKTVGLVPTMGY---LHEGHASLIERAHRENDRVAVSVFL 92

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLETAN---YSAE 105
              +P     +               + E +G   +        Y       +    S  
Sbjct: 93  ---NPTQFAPNEDLASYPRDFDRDVALCETIGADLVFHPEPEAMYHDPHAFVSIDLLSET 149

Query: 106 QFIQKVLVEWLEVKTVI-------TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFI--DE 156
                  + +  V TV+          +  FG+  A    I++K      F    +    
Sbjct: 150 MDGAARPIHFRGVCTVVSKLFNIFLPDRAYFGQKDAQQLAIVKKMAADLDFDVEVVGCPI 209

Query: 157 LRNNKSQIVSSSNI 170
           +R       SS N+
Sbjct: 210 VREADGLAKSSRNV 223


>gi|255711182|ref|XP_002551874.1| KLTH0B01914p [Lachancea thermotolerans]
 gi|238933252|emb|CAR21436.1| KLTH0B01914p [Lachancea thermotolerans]
          Length = 505

 Score = 36.3 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 36/134 (26%), Gaps = 18/134 (13%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +  +A +  N   +       HP   +     I   +   + ++I+++   G 
Sbjct: 199 MHRAHRELTVRAAREHNAKVLI------HPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGM 252

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL------- 140
           + L      +       E     ++ +       I G         +             
Sbjct: 253 AQLSLLPLAMRMGG-DREAVWHAIIRKNYGATHFIVGRDHAGPGKNSAGVDFYGAYDAQE 311

Query: 141 --QKRGEKYGFHTV 152
             +    + G   V
Sbjct: 312 LVESYKNELGIEVV 325


>gi|255692917|ref|ZP_05416592.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides finegoldii
           DSM 17565]
 gi|260621366|gb|EEX44237.1| glycerol-3-phosphate cytidylyltransferase [Bacteroides finegoldii
           DSM 17565]
          Length = 129

 Score = 36.3 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 22/133 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G+FD  H+GH  ILE++  + +   + V +       +IQ    +  + P   + +
Sbjct: 8   VFTSGSFDLFHIGHLNILEKSALLGDELIVGVST-----DELIQHYKGMPPIIPFEQRMR 62

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I+  +   + +++     E A    E            +  V  G  ++           
Sbjct: 63  IVSSIKCVTKVVKQVKLTEIAQLERE-----------NIDIVTIGDDWKDKY-----LEG 106

Query: 140 LQKRGEKYGFHTV 152
           L+   ++ G   V
Sbjct: 107 LEWIKQQPGKRVV 119


>gi|303254354|ref|ZP_07340462.1| hypothetical protein CGSSpBS455_02699 [Streptococcus pneumoniae
           BS455]
 gi|302598705|gb|EFL65743.1| hypothetical protein CGSSpBS455_02699 [Streptococcus pneumoniae
           BS455]
          Length = 365

 Score = 36.3 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 17/127 (13%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +LEQA        +  +S        +Q   P   +    I+ ++  + G
Sbjct: 10  FNPFHNGHKYLLEQA----EGLKVVAMS-----GNFMQRGEPA--IIDKWIRAQMALENG 58

Query: 87  FSALIRYKFTLETANYSAEQFIQKVLVE---WLEVKTVITGTKFRFGKDRAGDRGILQKR 143
              ++   F     +  A  F  +  V+    L + T+  GT+      +  D    Q+ 
Sbjct: 59  ADLVVELPF---LVSVQAADFFGQGAVDILARLGIDTLAFGTEEVLDYQKIADLYTEQEA 115

Query: 144 GEKYGFH 150
             +    
Sbjct: 116 EMEKFVE 122


>gi|226327285|ref|ZP_03802803.1| hypothetical protein PROPEN_01152 [Proteus penneri ATCC 35198]
 gi|225204503|gb|EEG86857.1| hypothetical protein PROPEN_01152 [Proteus penneri ATCC 35198]
          Length = 354

 Score = 36.3 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           V  G F  +H GH  ++++A    +   + +    P  + +   +S +      S + + 
Sbjct: 8   VIFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDKNLFI-NSAMSQQPTVSDRLRW 66

Query: 82  LEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           L +  F     +  ++F           +    + +  +L  K +     F +  +R   
Sbjct: 67  LLQT-FKYQKNIRIHEFDEHGIEPQPHGWEMWSEGIKAFLHEKQIT--PDFIYTSER--- 120

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               ++     G  TV ID  R+     +S S IR A
Sbjct: 121 -EDSEQYNAFLGIETVLIDPERSF--MNISGSQIRQA 154


>gi|296274467|ref|YP_003657098.1| phosphoenolpyruvate phosphomutase [Arcobacter nitrofigilis DSM
           7299]
 gi|296098641|gb|ADG94591.1| phosphoenolpyruvate phosphomutase [Arcobacter nitrofigilis DSM
           7299]
          Length = 428

 Score = 36.3 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 29/152 (19%)

Query: 28  DGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGF 87
           D +H GH  IL+ A ++     + +L+        I S   +  ++    +  I    G 
Sbjct: 11  DLVHPGHMNILKIAAELG-EVTVGLLT-----DKAIASYKRLPYMTYEQRKAVIENIKGV 64

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG---KDRAGDRGILQKRG 144
             +I+   TL+           +  +E +    V+ G  +R G   K R      L+K  
Sbjct: 65  KNVIKQD-TLDY----------RTNLEKIRPDFVVHGDDWRAGIQNKTRQQVIETLEKWN 113

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
            K       I+    +    +SS+ +   L  
Sbjct: 114 GKL------IEPSYTDG---ISSTALNKTLKD 136


>gi|116328339|ref|YP_798059.1| ADP-heptose synthase, adenylyltransferase component [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331065|ref|YP_800783.1| ADP-heptose synthase, adenylyltransferase component [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121083|gb|ABJ79126.1| ADP-heptose synthase, adenylyltransferase component [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124754|gb|ABJ76025.1| ADP-heptose synthase, adenylyltransferase component [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 158

 Score = 36.3 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 38/163 (23%)

Query: 4   FHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNP 57
           + N+ I  +     +  V   G FD IH GH   L QA ++ +      N+  +V     
Sbjct: 10  WENVAIFANRIRENRRIVFTNGCFDLIHRGHITYLSQARELGDFLWIGLNADSSV----- 64

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL 116
                ++         P   +  +L  +    A+         +  +  + I+ ++   +
Sbjct: 65  ---KRLKGEQRPVV--PEDDRAILLSNLRFVDAVTI------FSQETPLELIR-LIKPAI 112

Query: 117 EVKTVITGTKFRFGKDRAGDRGILQK--RGEKYGFHTVFIDEL 157
            VK    G  ++           L +     ++G     +  +
Sbjct: 113 HVK----GGDYK--------VEDLPETSIVREFGGKVEILPFV 143


>gi|261333451|emb|CBH16446.1| cholinephosphate cytidylyltransferase A,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 506

 Score = 36.3 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 14/103 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH   L+ A+   N   + V   +         +     +     +      
Sbjct: 359 GVFDLCHAGHKNFLQNALHYGNRLIVGVCGDDE------CEAYKRRPIMTVDER------ 406

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              + +   KF  +    S    + + +++   +  V+ G ++
Sbjct: 407 --VNEVKMCKFVSQVIRNSPVTGLTEEMIKRYNIHVVVCGDEY 447


>gi|242278041|ref|YP_002990170.1| cytidyltransferase-related domain protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242120935|gb|ACS78631.1| cytidyltransferase-related domain protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 509

 Score = 36.3 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 24/200 (12%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
            I + L  + K  V+  G FD +H+GH     QA    +   + +++  P          
Sbjct: 16  RIAKKLRENGKRIVLCHGVFDLLHIGHIRYFNQAKSHGD---VLIVTLTPDHYVDKGPDR 72

Query: 68  PIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
           P F      ++ + L  +G +  +             E    +  +  +       G +F
Sbjct: 73  PAF---TEILRAEALASLGETDYVAIN----------EWPTAEETLRAIRPHVYAKGDEF 119

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVF-IDELRNNKSQIVSSSNIRTALTKG--HVLNAAH 184
           +       D   L K G++         + +  +     SS+ I   L +    +     
Sbjct: 120 KD-----IDNDPLGKIGKEADVVREIGAELIFTSDIVYSSSNLINRYLNRNSEELDEYLK 174

Query: 185 LLGYRFTIESDVIHGEKIGR 204
           +   R+ ++  + H E++  
Sbjct: 175 MFRKRYQLDEVLDHLERMQN 194


>gi|308812522|ref|XP_003083568.1| Homolog to human PPAT; Ygr277cp (ISS) [Ostreococcus tauri]
 gi|116055449|emb|CAL58117.1| Homolog to human PPAT; Ygr277cp (ISS) [Ostreococcus tauri]
          Length = 296

 Score = 36.3 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 24/159 (15%)

Query: 25  GNFDGIHLGHHLILEQAIKIAN-NSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
           G FD +H GH  +L  A+++   N  + V ++       ++++      L     +   +
Sbjct: 144 GTFDRLHAGHRALLATAMRLVEPNGTLYVGVTSE----ALLRNKKYGELLEAYEDRADAV 199

Query: 83  EKMGFSALIRYKFTLETANYS--------AEQFIQKVLVEWLEVKTVITGTKFRFGKDRA 134
                       F LE  + S               +     E+  ++   +   G +  
Sbjct: 200 RA----------FLLECRDLSSPVDVRIGPLDEGPPLAATVREMSALVVSRETIVGAEAL 249

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
            D  +              I    +     +SS+ +R A
Sbjct: 250 NDMRVEAGFDPLDIIVVDLIGASASGDGTKLSSTALRAA 288


>gi|291295756|ref|YP_003507154.1| pantetheine-phosphate adenylyltransferase [Meiothermus ruber DSM
           1279]
 gi|290470715|gb|ADD28134.1| pantetheine-phosphate adenylyltransferase [Meiothermus ruber DSM
           1279]
          Length = 165

 Score = 36.3 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 52/149 (34%), Gaps = 18/149 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H GH  ++++A +      + VL            S     L  P  + +I+ +
Sbjct: 7   GSFDPLHNGHFDVIQRASRHFAKVTVAVLE---------NPSKRGLWLFTPLERVEIIRR 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
              SA +            AE       ++ +  + ++ G +     +       L ++ 
Sbjct: 58  AVASARLANVEVDTFNGLLAE------YMKQIGSRVIVKGLRAVSDYENELQMAHLNRQY 111

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
             +      +   R +    VSS+ ++  
Sbjct: 112 GNHPETFFIMAATRWS---FVSSTMVKEI 137


>gi|114707128|ref|ZP_01440026.1| pantoate--beta-alanine ligase [Fulvimarina pelagi HTCC2506]
 gi|114537324|gb|EAU40450.1| pantoate--beta-alanine ligase [Fulvimarina pelagi HTCC2506]
          Length = 262

 Score = 36.3 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 45/176 (25%), Gaps = 33/176 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A    +     V+S   +P    +               ++    G   
Sbjct: 4   LHAGHEALIRHARATDH---TLVVSIFVNPTQFGEGEDFERYPRTLDADLELCRIGGVDV 60

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWL--------------EVKTVITG-------TKFR 128
           +              E     V VE L               V TV+          +  
Sbjct: 61  VFMPSADE----MYPEPLQTHVAVEPLGDDLIGAVRPGHFRGVATVVCKLFNIVQPDRAY 116

Query: 129 FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSSSNIRTALTKGHVLNA 182
           FG+       ++++      F      +  +R      +SS   R +        A
Sbjct: 117 FGRKDFQQLALIRRMVADLSFPITIVGVPTVREADGLALSS---RNSRLDPDNRRA 169


>gi|326796509|ref|YP_004314329.1| Bifunctional protein hldE [Marinomonas mediterranea MMB-1]
 gi|326547273|gb|ADZ92493.1| Bifunctional protein hldE [Marinomonas mediterranea MMB-1]
          Length = 475

 Score = 36.3 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   + QA  + +   + V +     R  ++       ++    +  
Sbjct: 345 VFTNGCFDILHPGHVAYMRQAKALGDRLIVAVNTDASVKR--LKGEKRP--INDLKHRMA 400

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +LE +G    +    F  +           K L+E L    ++ G  + 
Sbjct: 401 VLEGIGAIDWVTC--FDED---------TPKELIEALSPDVLVKGGDYT 438


>gi|325848852|ref|ZP_08170362.1| cytidyltransferase-like protein [Anaerococcus hydrogenalis
          ACS-025-V-Sch4]
 gi|325480496|gb|EGC83558.1| cytidyltransferase-like protein [Anaerococcus hydrogenalis
          ACS-025-V-Sch4]
          Length = 59

 Score = 36.3 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
          V+  G FD +H GH  +LE+A  + +   + + +          S   I   +  S +EK
Sbjct: 4  VITYGTFDLLHYGHINLLERAKALGDYLIVAISTDE------FNSKEKIKKPTLASSKEK 57


>gi|320321919|gb|EFW78015.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330975|gb|EFW86949.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 474

 Score = 36.3 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA  + +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKIVFTNGCFDILHAGHVTYLEQARALGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSVDRRMAVLAGLGAVDWVISFP------EGTPENLLSHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 435 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKI 470


>gi|149189199|ref|ZP_01867486.1| Putative glycerol-3-phosphate cytidyltransferase [Vibrio shilonii
           AK1]
 gi|148836953|gb|EDL53903.1| Putative glycerol-3-phosphate cytidyltransferase [Vibrio shilonii
           AK1]
          Length = 131

 Score = 36.3 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 32/157 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD  H+GH  ILE+   + ++  I  +S +     +  S    + L   S + K
Sbjct: 5   VITFGTFDIFHIGHVNILERCASLGDHL-IVGISSD----ELNMSKKDRYPLYKESDRVK 59

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           I++ +     +          +  A    ++  +E+     +  G  ++           
Sbjct: 60  IVQSLSFVDEVFIEH------SLEA----KRKYLEFYRADILAMGDDWK----------- 98

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                 K+       D +   ++  VS++ I      
Sbjct: 99  -----GKFDMFNDICDVIYFPRTPSVSTTEIIEIAKN 130


>gi|326387411|ref|ZP_08209020.1| coenzyme A biosynthesis protein [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208067|gb|EGD58875.1| coenzyme A biosynthesis protein [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 179

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 13/121 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD I LGH  I+ +  K+ +   I V + NP    +      I  ++        + +
Sbjct: 19  GTFDPITLGHLDIIRRGAKLVDRLIIGVTT-NPSKDPLFTPEERIAMVTRE------VAE 71

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
            G   +    F      + AE+    V++  L          F +    AG    L  R 
Sbjct: 72  QGIENVEVVGFNALLMKF-AEKQGASVIIRGLRAVA-----DFEYEYQMAGMNQQLNNRI 125

Query: 145 E 145
           E
Sbjct: 126 E 126


>gi|220932486|ref|YP_002509394.1| RfaeE domain II [Halothermothrix orenii H 168]
 gi|219993796|gb|ACL70399.1| RfaeE domain II [Halothermothrix orenii H 168]
          Length = 158

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 35/174 (20%)

Query: 9   INQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI--IQSS 66
           I Q+L    K  V   G FD IH+GH   L +A    +   + V        ++  ++  
Sbjct: 14  IVQTLKQGGKTLVFTNGCFDLIHVGHIRYLYRARSFGDILIVAV----NSDSSVRQLKGE 69

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
           +    +     + ++L  +     +  +            +     +++ ++    + G 
Sbjct: 70  NRP--IINERERAELLSALEMVDYVFIFD-----------ELTCSNVIKEIKPDVYVKGG 116

Query: 126 KFRFGKDRAGDRGILQKRG--EKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
            +            L +    ++ G     + E++       S++ I   +   
Sbjct: 117 DYTL--------ETLPEWPVVKELGSRVELVKEVKGK-----STTEIINKIKSH 157


>gi|189346137|ref|YP_001942666.1| pantoate--beta-alanine ligase [Chlorobium limicola DSM 245]
 gi|238692200|sp|B3EH07|PANC_CHLL2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
          Full=Pantoate--beta-alanine ligase; AltName:
          Full=Pantoate-activating enzyme
 gi|189340284|gb|ACD89687.1| pantoate/beta-alanine ligase [Chlorobium limicola DSM 245]
          Length = 283

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 13 LPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL 72
          L   L G V+ +G    +H GH  +++QA  +   +   +L+   +P+            
Sbjct: 19 LNRQLIGVVMTMG---ALHEGHLSLIKQARSL---AGTVILTIFVNPKQFGPDEDFHRYP 72

Query: 73 SPPSIQEKILEKMGFSALI 91
           P  +     +  G   L 
Sbjct: 73 RPFELDASHAKAAGVDYLF 91


>gi|291515844|emb|CBK65054.1| pantothenate synthetase [Alistipes shahii WAL 8301]
          Length = 279

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 1  MHVFHNIEINQSLPNHLK----GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFN 56
          M VF +++  ++  +  +    G V  +G    +H GH  ++E+A      +   V+S  
Sbjct: 1  MKVFTSVKELRAELDRTEQSGIGFVPTMG---ALHAGHRSLVERAR---RENATVVVSVF 54

Query: 57 PHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
           +P      +        P    ++LE+ G   ++ 
Sbjct: 55 VNPTQFNDKNDLRHYPRTPEADRRLLEEAGADFVLM 90


>gi|146318033|ref|YP_001197745.1| nucleotidyltransferase [Streptococcus suis 05ZYH33]
 gi|145688839|gb|ABP89345.1| Predicted nucleotidyltransferase [Streptococcus suis 05ZYH33]
          Length = 112

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 15/97 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
            H GH  +LEQA        I V+S        +Q   P   +     + ++  + G   
Sbjct: 13  FHTGHKYLLEQA----EGLKIVVMS-----GNFMQRGEPA--IVDKWTRAQMALEHGADL 61

Query: 90  LIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITG 124
           ++   F +     SA+ F +    ++  L V+ ++ G
Sbjct: 62  VVEMPFLVSV--QSADHFAKGAISILHRLGVEKLVFG 96


>gi|15605755|ref|NP_213132.1| glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5]
 gi|2982903|gb|AAC06521.1| glycerol-3-phosphate cytidyltransferase [Aquifex aeolicus VF5]
          Length = 157

 Score = 36.3 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 39/166 (23%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFT 71
           K  V   G FD IH GH   LE+A K+ +      NS  +V       R I     P   
Sbjct: 19  KKVVFTNGCFDIIHAGHVDYLEKAKKLGDILVVGMNSDSSV-------RRIKGERRP--- 68

Query: 72  LSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           + P  ++ K+L  +     ++ ++        + E+ I     + ++   ++ G  +   
Sbjct: 69  IIPQEMRAKVLSSLKPVDYVVIFEED------TPEKLI-----KAIKPDVLVKGGDWPL- 116

Query: 131 KDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
                D+ + ++  E YG   + I          +S+S I   + +
Sbjct: 117 -----DKIVGREFVESYGGKVLTIP-----FEYDISTSKIVQKVLE 152


>gi|288904751|ref|YP_003429972.1| phosphopantetheine adenylyltransferase [Streptococcus gallolyticus
           UCN34]
 gi|306830750|ref|ZP_07463914.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|288731476|emb|CBI13030.1| Phosphopantetheine adenylyltransferase [Streptococcus gallolyticus
           UCN34]
 gi|304427097|gb|EFM30205.1| pantetheine-phosphate adenylyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 165

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+ +A K+ +   + +                 F       + ++LE+
Sbjct: 9   GSFDPVTNGHLDIIARASKLFDTLFVGI---------FYNKDKNGFF--SVDERRQMLEE 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                    +F       +A   +   + + LEV  ++ G   R GKD   +   L    
Sbjct: 58  A------LQEF-PNVKVITARDSLVVDIAKRLEVGYLVRG--LRNGKDLEYEAD-LAFYN 107

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
                    +  L +     VSSS IR  +
Sbjct: 108 HYLASEIESVFLLSSPDLVHVSSSRIRELI 137


>gi|262068136|ref|ZP_06027748.1| pantetheine-phosphate adenylyltransferase [Fusobacterium
          periodonticum ATCC 33693]
 gi|291378224|gb|EFE85742.1| pantetheine-phosphate adenylyltransferase [Fusobacterium
          periodonticum ATCC 33693]
          Length = 163

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 25 GNFDGIHLGHHLILEQAIKIANNSPITVL 53
          G+FD +  GH  I+E+A+KI +   + V+
Sbjct: 8  GSFDPVTKGHQDIIERALKIVDKLIVVVM 36


>gi|332530613|ref|ZP_08406547.1| pantoate--beta-alanine ligase [Hylemonella gracilis ATCC 19624]
 gi|332039950|gb|EGI76342.1| pantoate--beta-alanine ligase [Hylemonella gracilis ATCC 19624]
          Length = 279

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 1  MHVFHNI-EINQSLPNHLKGGVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
          M V H I E+   L  H +   V  +GN   +H GH  ++EQA  + +   +TV S   +
Sbjct: 1  MKVIHTISELRAELRQHERPAFVPTMGN---LHDGHLALVEQARPLGD---VTVASIFVN 54

Query: 59 PRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
              +                  L   G   + 
Sbjct: 55 RLQFLPHEDFNTYPRTLEADCAKLAPAGCDIVF 87


>gi|325068338|ref|ZP_08127011.1| GNAT family protein [Actinomyces oris K20]
          Length = 130

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 55/154 (35%), Gaps = 30/154 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L++A  + +   +  LS +        +            ++ 
Sbjct: 4   VITYGTYDLLHYGHIALLKRARALGDFL-MVALSSDE-----FNAGKGKQAYFSYEERKV 57

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +LE + +  L+  + T            +   +    +   + G  +    +   D   L
Sbjct: 58  MLEAIRYVDLVVPEMT---------WGQKTGDIAKYGIDVFVMGDDW----NGEFD-DQL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +          V++      ++  VS++ I++ +
Sbjct: 104 KGLC-----EVVYLP-----RTPEVSTTRIKSDM 127


>gi|167550621|ref|ZP_02344378.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205324450|gb|EDZ12289.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|238797538|ref|ZP_04641036.1| Transcriptional regulator nadR [Yersinia mollaretii ATCC 43969]
 gi|238718679|gb|EEQ10497.1| Transcriptional regulator nadR [Yersinia mollaretii ATCC 43969]
          Length = 425

 Score = 36.3 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIFLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + + +++  K ++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKKFMAEKGIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPRYREQLGIETILIDPQRSF--MNISGRQIRR 213


>gi|284162833|ref|YP_003401456.1| cytidyltransferase [Archaeoglobus profundus DSM 5631]
 gi|284012830|gb|ADB58783.1| cytidyltransferase-related domain protein [Archaeoglobus profundus
           DSM 5631]
          Length = 152

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 54/170 (31%)

Query: 22  VAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQS-----------SSPI 69
           VA+G  FD +H GH  ++ +A  I+ +    V + +   R  +++              +
Sbjct: 3   VALGGTFDPLHEGHKRLIRKAFSISKDVVFGV-TSDEMARKRLRNVLPYNVRVRNLKEYV 61

Query: 70  FTLSPPSIQEKILEKM-------GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVI 122
                   + +I++          +  LI    T E A             + +  K + 
Sbjct: 62  KRSYGVEPRIEIIKDCYGKTLEEDYDYLIVSPETYENA-------------KRINKKRIE 108

Query: 123 TGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            G                     K     V +D +     + +S++ I+ 
Sbjct: 109 IG---------------------KRPITIVVVDFVLAYDKKPISATRIKN 137


>gi|325298341|ref|YP_004258258.1| cytidyltransferase-related domain-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324317894|gb|ADY35785.1| cytidyltransferase-related domain protein [Bacteroides salanitronis
           DSM 18170]
          Length = 448

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 58/162 (35%), Gaps = 40/162 (24%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +L++A  + +   + V   SF+       +    +   +    +
Sbjct: 4   VITYGTYDLLHQGHINLLKRAKALGDYLIVGVTNDSFD-------RDRGKLNVRNNVLER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAG 135
            + ++  G    +I             E +I +    ++   +     G+ +       G
Sbjct: 57  VEAVKATGLADRIII------------EDYIGQKIDDIQKYNIDIFAIGSDW------EG 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
               L +  +      V++      +++ +SS+ +R    + 
Sbjct: 99  KFDYLNEFCK-----VVYLP-----RTEGISSTQLRAESQET 130


>gi|300705339|ref|YP_003746942.1| cytidylyltransferase (aut gene) [Ralstonia solanacearum CFBP2957]
 gi|299073003|emb|CBJ44360.1| putative Cytidylyltransferase (aut gene) [Ralstonia solanacearum
           CFBP2957]
          Length = 166

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 8/95 (8%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  +  +  + V + +   R + +       L+    
Sbjct: 30  RPLVFTNGVFDILHRGHVTYLAQARALGASLVVGVNT-DASVRMLGKGDDRP--LNAQDD 86

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           +  +L  +   +L+        A  +  + I++V 
Sbjct: 87  RLAVLAALESVSLVVL-----FAERTPVELIRRVR 116


>gi|153868722|ref|ZP_01998473.1| Cytidyltransferase [Beggiatoa sp. PS]
 gi|152074693|gb|EDN71524.1| Cytidyltransferase [Beggiatoa sp. PS]
          Length = 508

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 28/171 (16%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPI--TVLSFNPHPRTIIQS 65
           +  Q L    K  V+  G FD +H+GH   +    +      +    ++ + H       
Sbjct: 14  QKAQILREQGKKVVLCHGAFDLVHIGH---IRHLRRAHQEGDVLMVTVTADQHINK--GP 68

Query: 66  SSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
             P++     +++ + L  +     +                     ++  L+    + G
Sbjct: 69  GRPVY---NEALRAENLASLIWIDYVAVND-----------DPTAINVINMLKPNVYVKG 114

Query: 125 TKFR-FGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
            ++R   +D  G+        E +G    F DE+        SSS +    
Sbjct: 115 GEYRNINEDVTGNIAKEINAVESHGGKVFFTDEIT-----FSSSSLLNEHF 160


>gi|162312202|ref|NP_595662.2| sulfate adenylyltransferase [Schizosaccharomyces pombe 972h-]
 gi|19861623|sp|P78937|MET3_SCHPO RecName: Full=Sulfate adenylyltransferase; AltName:
           Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate
           transferase; Short=SAT
 gi|23451264|gb|AAN32720.1|AF421374_1 ATP sulfurylase [Schizosaccharomyces pombe]
 gi|157310410|emb|CAB89007.2| sulfate adenylyltransferase [Schizosaccharomyces pombe]
          Length = 490

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 9/120 (7%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A      VL    HP   +     I   +   + E IL++   G 
Sbjct: 198 MHRAHREL---TVRAAKQHGARVLI---HPVVGMTKPGDIDHFTRVRVYEAILQRYPKGS 251

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
           + L      +  A    E     ++ +       I G         +           +Y
Sbjct: 252 AKLSLLPLAMRMAG-PREALWHAIIRKNYGASHFIIGRDHAGPGKNSQGEDFYGPYDAQY 310


>gi|16759173|ref|NP_454790.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140723|ref|NP_804065.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213053565|ref|ZP_03346443.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213581783|ref|ZP_03363609.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213650752|ref|ZP_03380805.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213852719|ref|ZP_03382251.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825565|ref|ZP_06544759.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|24638096|sp|Q8Z9D3|PANC_SALTI RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|25323779|pir||AG0524 pantoate,beta-alanine ligase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501463|emb|CAD01335.1| pantoate:beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136347|gb|AAO67914.1| pantoate:beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 35/170 (20%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG------------------ 124
            K     +    F         +    +  V+   + T++ G                  
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEGTSRPGHFRGVSTIVSKLF 138

Query: 125 ----TKF-RFGKDRAGDRGILQKRGEKYG--FHTVFIDELRNNKSQIVSS 167
                    FG+       +++K     G     V +  +R      +SS
Sbjct: 139 NLIQPDIACFGEKDFQQLALIRKMVADMGYDIEIVGVPIIRAKDGLALSS 188


>gi|296114228|ref|ZP_06832883.1| bifunctional protein RfaE [Gluconacetobacter hansenii ATCC 23769]
 gi|295979304|gb|EFG86027.1| bifunctional protein RfaE [Gluconacetobacter hansenii ATCC 23769]
          Length = 488

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 26/114 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL----SPPS 76
           V   G FD IH GH  ++  A K  +   +            + + S I  L     P  
Sbjct: 346 VFTNGCFDLIHPGHIELIRAAAKEGDKLIVA-----------LNTDSSIRRLKGESRPIQ 394

Query: 77  IQEKILEKMGF--SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
            +      MG      +   F  +    +    IQ+     L    ++ G  + 
Sbjct: 395 DEIARATVMGALRDVDLVILFDED----TPLDLIQE-----LRPDVLVKGADYT 439


>gi|257085565|ref|ZP_05579926.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           Fly1]
 gi|256993595|gb|EEU80897.1| glycerol-3-phosphate cytidylyltransferase [Enterococcus faecalis
           Fly1]
          Length = 132

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD +H GH  +L++A +  +   + + +                +      +++
Sbjct: 4   ILTYGTFDLLHYGHINLLKKAKQQGDYLIVGLST------DAFNLEKKKQSYFSYEKRKQ 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           +LE +     +I           S +Q +  +     ++ T++ G  +       G    
Sbjct: 58  LLEAIRYVDLVIP--------ETSWKQKVSDIA--EFKIDTLVMGDDW------QGAFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNN-KSQIVSSSNIRTAL 174
           L               ++    ++  VS++ I+  L
Sbjct: 102 L---------EVETPAKVLYLPRTPEVSTTQIKKEL 128


>gi|302873019|ref|YP_003841652.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|307688812|ref|ZP_07631258.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|302575876|gb|ADL49888.1| thymidylate kinase [Clostridium cellulovorans 743B]
          Length = 212

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 25/117 (21%)

Query: 122 ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
           I G     G  ++    +L+K     G+  V     R      + S  IR  +       
Sbjct: 15  IEGPD---GSGKSTQIELLKKYFNDRGYEVVTT---REPGGTKI-SEKIRELILDNDNEE 67

Query: 182 AAHLLGYRFTIESDVIHGEKIGRTLGFPTANMQLSPDILLKEGVYAIRFRTQDQTSY 238
                               I   L +  +  QL   +L K  +Y  +    D+  +
Sbjct: 68  MN-----------------GICEALLYAASRAQLVEQVL-KPAIYEGKIVLCDRFVH 106


>gi|224542083|ref|ZP_03682622.1| hypothetical protein CATMIT_01257 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525016|gb|EEF94121.1| hypothetical protein CATMIT_01257 [Catenibacterium mitsuokai DSM
           15897]
          Length = 380

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 31  HLGHHLILEQAIKIAN-NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           HLGH L L++A K+   +  I V+S      + +Q   P   +     +  I  + G   
Sbjct: 14  HLGHRLHLQEAKKLIKPDLTICVMS-----SSFVQRGEPA--IISYQKRAAIAIEEGIDI 66

Query: 90  LIRYKFTLETANYSAEQFIQK--VLVEWLEVKTVITGTK 126
           +I     L  A  SA+ F +    L+  + V  ++ G++
Sbjct: 67  VIELP--LVYACQSADYFAKGAVTLLHEMGVTDLVFGSE 103


>gi|323333116|gb|EGA74516.1| Pan6p [Saccharomyces cerevisiae AWRI796]
 gi|323348184|gb|EGA82435.1| Pan6p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|323308639|gb|EGA61880.1| Pan6p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|288799858|ref|ZP_06405317.1| glycerol-3-phosphate cytidylyltransferase [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288333106|gb|EFC71585.1| glycerol-3-phosphate cytidylyltransferase [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 142

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 28/158 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
             G FD  H+GH  IL++A +  +   + V +       ++++      +   S ++ I+
Sbjct: 11  TTGVFDMFHVGHLNILKRAKEKCDYLIVGVST-----DEVVKAYKNKTPIVNFSERKAIV 65

Query: 83  EKMG-FSALIRYKFTLETANYSAEQFIQKVLV-EWLEVKTVITGTKFRFGKDRAGDRGIL 140
           E +     ++             +  + K+     L    +  G+ +            +
Sbjct: 66  ESIRYVDKVV------------PQITMNKLDAWNELHFDIMFHGSDW----QGTAMYDKI 109

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
            +     G   VF+       +  VSS+ +   L    
Sbjct: 110 IENLNSVGVEVVFLP-----HTDGVSSTLLSELLYNKK 142


>gi|317130302|ref|YP_004096584.1| cytidyltransferase-related domain protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475250|gb|ADU31853.1| cytidyltransferase-related domain protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 449

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 32/153 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           ++  G FD  H GH  +L++A  + +   + V S      +   S   +        +  
Sbjct: 4   IITYGTFDLFHEGHLNLLKRAKDLGDYLLVGVTS-----ESYDNSRGKLNVQDNLMKRID 58

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
            +   G    +I  ++          Q I  +L     +     G+ + FGK        
Sbjct: 59  NVLATGLVDEVIIEEY--------EGQKINDIL--KYNINIFAIGSDW-FGK-----FDY 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           L++  E           +   +++ VSS+ +R 
Sbjct: 103 LKEYCEV----------VYLERTKGVSSTYLRE 125


>gi|207109689|ref|ZP_03243851.1| hypothetical protein HpylH_10919 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 106

 Score = 36.3 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 11/74 (14%)

Query: 25 GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL---SPPSIQEKI 81
          G+FD +H  H  I+EQ +++   + + VL                  L   +     E+ 
Sbjct: 15 GSFDPLHKAHLAIIEQTLELLPFAKLIVL------PAYQNPFKKPCFLDAKTRFKELERA 68

Query: 82 LEKMGFSALIRYKF 95
          L+  G   ++   F
Sbjct: 69 LK--GIDRVLLSDF 80


>gi|329119909|ref|ZP_08248583.1| pantoate-beta-alanine ligase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464065|gb|EGF10376.1| pantoate-beta-alanine ligase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 278

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 62/209 (29%), Gaps = 32/209 (15%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV---AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +   I   ++      G V     +GN   +H GH  ++ +A K A+      +S   
Sbjct: 1   MDIIRTIREMRTW-RKTAGTVAFVPTMGN---LHEGHLALVREAKKRAD---SVAVSIFV 53

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI------RYKFTLETANYSAEQFIQKV 111
           +     Q                 LE  G S L        Y    +  N        ++
Sbjct: 54  NRLQFGQGEDFDRYPRTLQEDAAKLEGEGVSVLFAPDERELYPRVAQRYNIEPPHLQNEL 113

Query: 112 LVE-----WLEVKTVI------TGTKF-RFGKDRAGDRGILQKRGEKYGFHT--VFIDEL 157
                   +  V TV+          F  FGK       +++   E   F    V +D  
Sbjct: 114 CGRFRPGHFRGVATVVAKLFNIVQPDFACFGKKDYQQLAVIKGLVEDLDFPVQIVPVDTG 173

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLL 186
           R      +SS N    L++     A  L 
Sbjct: 174 RAADGLALSSRN--RYLSETERAQAPRLY 200


>gi|323337136|gb|EGA78390.1| Pan6p [Saccharomyces cerevisiae Vin13]
          Length = 304

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|307132387|ref|YP_003884403.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Dickeya dadantii 3937]
 gi|306529916|gb|ADM99846.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Dickeya dadantii 3937]
          Length = 475

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 25/158 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L  A ++ +   + V S +   + +   S P+  L+   I   
Sbjct: 343 VMTNGCFDILHAGHVSYLANARRLGDRLIVAVNS-DDSTKRLKGPSRPVNPLTQRMIVLG 401

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
            LE      ++   F  +    + ++ I +VL + L     + G  ++  +D AG + + 
Sbjct: 402 ALEA--VDWVV--PFEED----TPQRLISEVLPDIL-----VKGGDYK-PEDIAGSKEVW 447

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
                  G     +     N     S++NI   +    
Sbjct: 448 -----ANGGEVRVL-----NFEDGCSTTNIINTIKARD 475


>gi|73669580|ref|YP_305595.1| glycerol-3-phosphate cytidyltransferase [Methanosarcina barkeri
           str. Fusaro]
 gi|121724722|sp|Q46AS7|RIBL_METBF RecName: Full=FAD synthase; AltName: Full=FMN adenylyltransferase;
           AltName: Full=Flavin adenine dinucleotide synthase
 gi|72396742|gb|AAZ71015.1| FMN adenylyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 139

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 33/162 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-----LSFNPHPRTIIQSSSPIFTLSPP 75
           ++A G FD +H GH   L QA  + +   + V     ++                 +   
Sbjct: 4   ILATGTFDLLHPGHIYFLTQARALGDELFVIVARDSNVT------------HKPKPIVSE 51

Query: 76  SIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
             + +++  +G                S +   + +  + +    +  G   RF      
Sbjct: 52  EQRLEMVNALGIV-------DKALLG-SEKDMFEPL--KHIRPDIIALGYDQRF------ 95

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +   L++   K G     +    + +  + S+  I   + K 
Sbjct: 96  NAENLEEELAKRGLPANVVRIPLSKECPLCSTGAIIKEVLKR 137


>gi|62178751|ref|YP_215168.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|198243382|ref|YP_002214138.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389233|ref|ZP_03215845.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205351520|ref|YP_002225321.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855697|ref|YP_002242348.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224582028|ref|YP_002635826.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|75484821|sp|Q57T74|PANC_SALCH RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226700766|sp|B5FIX7|PANC_SALDC RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226700767|sp|B5R3E5|PANC_SALEP RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|226700768|sp|B5RHC0|PANC_SALG2 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|254778234|sp|C0Q5P3|PANC_SALPC RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|62126384|gb|AAX64087.1| pantothenate synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197937898|gb|ACH75231.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199606331|gb|EDZ04876.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205271301|emb|CAR36092.1| Pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707500|emb|CAR31774.1| Pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466555|gb|ACN44385.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713205|gb|EFZ04776.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|326621881|gb|EGE28226.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626546|gb|EGE32889.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|56412457|ref|YP_149532.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361393|ref|YP_002141028.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|78099058|sp|Q5PDB8|PANC_SALPA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|238690792|sp|B5BL64|PANC_SALPK RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|56126714|gb|AAV76220.1| pantoate:beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092868|emb|CAR58294.1| pantoate:beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|332158857|ref|YP_004424136.1| hypothetical protein PNA2_1217 [Pyrococcus sp. NA2]
 gi|331034320|gb|AEC52132.1| hypothetical protein PNA2_1217 [Pyrococcus sp. NA2]
          Length = 501

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 5/71 (7%)

Query: 47  NSPITVLSFNPHPRTIIQSSSPIFTL----SPPSIQEKILEKMGFSALIRYKFTLETANY 102
             P+  +++  H    +        +    + P  +E+I+EK G   +I   F  E  N 
Sbjct: 417 GRPVVAVTY-GHGNPFLNMEQRRKDIQEFFTNPRKREEIIEKYGIKYVILCPFVEEKYNV 475

Query: 103 SAEQFIQKVLV 113
           +   F     V
Sbjct: 476 TISNFSDDFKV 486


>gi|228988502|ref|ZP_04148591.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229158838|ref|ZP_04286896.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus cereus ATCC
           4342]
 gi|228624822|gb|EEK81591.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus cereus ATCC
           4342]
 gi|228771218|gb|EEM19695.1| Glycerol-3-phosphate cytidylyltransferase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 131

 Score = 36.3 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH  +L++A  + +   I  +S +                     ++ 
Sbjct: 4   VITYGTFDLLHWGHINLLKRAKDLGDYL-IVAISSDE-----FNKLKGKKAYHSYENRKM 57

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
           ILE +     +I             E   ++  V+  +V   + G  +       G    
Sbjct: 58  ILEAVRYVDEVIPEH----------EWEQKEKDVKEHDVDLFVMGDDW------EGKFDF 101

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           L+           ++      ++  +S++ I+  L 
Sbjct: 102 LKPYC-----EVKYLP-----RTAGISTTKIKQELL 127


>gi|323304561|gb|EGA58325.1| Pan6p [Saccharomyces cerevisiae FostersB]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|323354537|gb|EGA86373.1| Pan6p [Saccharomyces cerevisiae VL3]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|317014266|gb|ADU81702.1| putative ADP-D-glycero-D-mannoheptose synthase [Helicobacter pylori
           Gambia94/24]
          Length = 463

 Score = 36.3 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSS 66
           ++ ++L ++ +  V   G FD +H GH   L++A  +     + V L+ +   +  ++  
Sbjct: 320 KLLETLEHNQQKIVFTNGCFDILHKGHASYLQKAKAL--GDILVVGLNSDNSIKR-LKGD 376

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                +     +  +L  +     ++ ++                 L++ L+   ++ G 
Sbjct: 377 KRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDILVKGA 423

Query: 126 KF 127
            +
Sbjct: 424 DY 425


>gi|238897989|ref|YP_002923669.1| bifunctional ADP-L-glycero-D-manno-heptose synthase: putative
           kinase (N-terminal); putative sugar nucleotide
           transferase (C-terminal) [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465747|gb|ACQ67521.1| bifunctional ADP-L-glycero-D-manno-heptose synthase: putative
           kinase (N-terminal); putative sugar nucleotide
           transferase (C-terminal) [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 476

 Score = 36.3 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H GH   L +A K  +   + V + +    ++ +    +  ++    +  
Sbjct: 343 VMTNGCFDILHAGHITYLSEAKKYGDRLIVAVNTDD----SVRELKGQMRPINSLDQRMA 398

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWL 116
           +L  +     ++        +  + E+ I ++L + L
Sbjct: 399 VLSALKYVDWVVP------FSEKTPERLISEILPDVL 429


>gi|207344434|gb|EDZ71581.1| YIL145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|325696999|gb|EGD38886.1| protein of hypothetical function DUF795 [Streptococcus sanguinis
           SK160]
          Length = 364

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 16/95 (16%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +LEQA        I V+S        +Q   P  ++     + ++  + G
Sbjct: 10  FNPFHNGHKYLLEQAS----GLKIIVMS-----GNFVQRGEP--SIVDKWTRAQMALEAG 58

Query: 87  FSALIRYKF-----TLETANYSAEQFIQKVLVEWL 116
              ++   F       +     A   ++++ +E L
Sbjct: 59  ADLVLELPFLVSVQAADFFAKGAVDILERLGIEQL 93


>gi|211907041|gb|ACJ12043.1| orf1ab polyprotein [Bulbul coronavirus HKU11-796]
          Length = 6262

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 94   KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
                +    S E FI    ++ L V+ +I G          G   ++     K+ F  V
Sbjct: 5849 PMEKDFLEMSPEDFITNYQLQGLGVEHIIYGDDTT--PVIGGTHAMISLVKNKFSFELV 5905


>gi|211907031|gb|ACJ12034.1| orf1ab polyprotein [Bulbul coronavirus HKU11-934]
          Length = 6264

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 94   KFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTV 152
                +    S E FI    ++ L V+ +I G          G   ++     K+ F  V
Sbjct: 5851 PMEKDFLEMSPEDFITNYQLQGLGVEHIIYGDDTT--PVIGGTHAMISLVKNKFSFELV 5907


>gi|168820818|ref|ZP_02832818.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|238911248|ref|ZP_04655085.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|205342446|gb|EDZ29210.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320084433|emb|CBY94226.1| pantothenate synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|168230481|ref|ZP_02655539.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469728|ref|ZP_03075712.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194456092|gb|EDX44931.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205334941|gb|EDZ21705.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|324993432|gb|EGC25352.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK405]
 gi|327461706|gb|EGF08037.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK1]
 gi|327489559|gb|EGF21352.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK1058]
          Length = 164

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPITKGHVDLIERASRLFDKLYVGI---------FYNREKYGFFRIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +            +++  +   +   L  K  + G +     D   +        
Sbjct: 61  QHLDNVEVI---------TSQNELAVTVARRLGAKAFVRGLRNSQDLDYEANMNF---FN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           ++       I  L     Q +SSS IR  + 
Sbjct: 109 QELAGEIETIFLLSKPVYQYISSSRIRELIA 139


>gi|307637545|gb|ADN79995.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose7-
           phosphatekinase [Helicobacter pylori 908]
 gi|325996136|gb|ADZ51541.1| ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Helicobacter pylori 2018]
 gi|325997732|gb|ADZ49940.1| ADP-heptose synthase /D-glycero-beta-D-manno-heptose 7-phosphate
           kinase [Helicobacter pylori 2017]
          Length = 463

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSS 66
           ++ ++L ++ +  V   G FD +H GH   L++A  +     + V L+ +   +  ++  
Sbjct: 320 KLLETLEHNQQKIVFTNGCFDILHKGHASYLQKAKAL--GDILVVGLNSDNSIKR-LKGD 376

Query: 67  SPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGT 125
                +     +  +L  +     ++ ++                 L++ L+   ++ G 
Sbjct: 377 KRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDILVKGA 423

Query: 126 KF 127
            +
Sbjct: 424 DY 425


>gi|300871752|ref|YP_003786625.1| putative ADP-heptose synthase [Brachyspira pilosicoli 95/1000]
 gi|300689453|gb|ADK32124.1| putative ADP-heptose synthase [Brachyspira pilosicoli 95/1000]
          Length = 151

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 58/130 (44%), Gaps = 18/130 (13%)

Query: 2   HVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
            + +N+E  +++ N  +G   V   G FD IH GH   L++A ++ +   + + S +   
Sbjct: 3   KILNNLEELKNILNAREGKKIVFTNGCFDIIHRGHVEYLQKAKELGDILILGLNSDDSVR 62

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEV 118
           R  ++ +S    ++  + +  +L  +     ++   F  +    +  + I     ++++ 
Sbjct: 63  R--LKGASRP--INNETDRAIVLSALECIDYVVI--FDED----TPLELI-----KFIKP 107

Query: 119 KTVITGTKFR 128
             ++ G  ++
Sbjct: 108 DILVKGGDYK 117


>gi|239978172|ref|ZP_04700696.1| cytidyltransferase-related protein [Streptomyces albus J1074]
          Length = 148

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM 85
           FD +H+GH   L    +     P+ V +  +   R     + P     P   + ++L  +
Sbjct: 17  FDLLHVGHVRFLAAVRE--RGLPLLVGVEDDRRTRGWKGPARPFQ---PEEERAELLRAL 71

Query: 86  -GFSALIRYKFTLETANYSA 104
                            ++A
Sbjct: 72  RPVDGTFLVHGDPSVTEWTA 91


>gi|238758574|ref|ZP_04619750.1| Transcriptional regulator nadR [Yersinia aldovae ATCC 35236]
 gi|238703274|gb|EEP95815.1| Transcriptional regulator nadR [Yersinia aldovae ATCC 35236]
          Length = 425

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I +    P    + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHIILCYDEPRDLELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + + +++  K +     
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDENGIEPYPHGWDVWSRGVNKFMNEKGIT--PN 173

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           F +  +            E++G  T+ ID  R+     +S   IR 
Sbjct: 174 FIYSSE----SQDAPHYNEQFGIETILIDPQRSF--MNISGRQIRR 213


>gi|557778|emb|CAA86133.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 345

 Score = 36.3 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 1   MHVFHNIEI-----NQSLPN----HLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           M +FH +E       Q L         G V  +G    +H GH  ++ Q++K       T
Sbjct: 37  MKIFHTVEEVVQWRTQELRETRFRETIGFVPTMGC---LHSGHASLISQSVKENT---YT 90

Query: 52  VLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALI 91
           V+S   +P     +              K+LE +    L 
Sbjct: 91  VVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESLKVDVLF 130


>gi|325961908|ref|YP_004239814.1| cytidyltransferase-related enzyme [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323467995|gb|ADX71680.1| cytidyltransferase-related enzyme [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 484

 Score = 36.3 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 17/115 (14%)

Query: 16  HLKGGVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
              G VVA G  FD +H GH   L  A ++ +   I  L+ +   R +     P   +  
Sbjct: 346 DNGGTVVATGGCFDLLHAGHVRSLAAARELGD-CLIVCLNSDDSVRRLKGPERP---IIG 401

Query: 75  PSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
              + ++L  M    A++   F  +    + E  +     E L     + G  ++
Sbjct: 402 QQDRAELLLAMECVDAVMI--FDED----TPEAAL-----ERLRPDIWVKGGDYK 445


>gi|118581990|ref|YP_903240.1| rfaE bifunctional protein [Pelobacter propionicus DSM 2379]
 gi|150383472|sp|A1AV12|HLDE_PELPD RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|118504700|gb|ABL01183.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase [Pelobacter propionicus
           DSM 2379]
          Length = 488

 Score = 36.3 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 54/162 (33%), Gaps = 29/162 (17%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPR-TIIQSSSPIFTLSPPS 76
           K  V   G FD +H GH   L++A  + +   + VL  N       ++       L    
Sbjct: 352 KRIVFTNGCFDLLHAGHVKYLQKARTLGD---LLVLGLNSDASVRRLKGEKRP--LIGEQ 406

Query: 77  IQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAG 135
            +  IL  +     ++ ++        +  + I       L+   +  G  +       G
Sbjct: 407 ERAHILAALDCIDYVVIFEED------TPLELIA-----ALKPHILAKGGDYT----PEG 451

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
             G  ++  E YG     +  +        S++NI   + + 
Sbjct: 452 VVG--RELVESYGGRVELVSFVDGK-----STTNIIERVLER 486


>gi|237752588|ref|ZP_04583068.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376077|gb|EEO26168.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 199

 Score = 36.3 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 57/191 (29%), Gaps = 41/191 (21%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  H GH  I++ AIK      + ++     P + +      F  +P + +   LE+
Sbjct: 10  GSFDPPHNGHLAIIQSAIKQLALDTLFIV-----P-SFLNPFKNAFYFTPNT-RLAWLEQ 62

Query: 85  M--GFS----ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF-----RFGKDR 133
           +         AL    F  E    +     + +       K ++    F      F    
Sbjct: 63  ITKNIDSKKCALSVLDF--EVRQNAPTPTFKTL-------KHILNSYDFGTNARYFLLLG 113

Query: 134 AGDRGILQKRGE----KYGFHTVFID----------ELRNNKSQIVSSSNIRTALTKGHV 179
           A +   L K  E    +     V I                K   +S++ +R  L     
Sbjct: 114 ADNVESLPKWAEFSWLEKNVEFVIIPRNNYTIPKNYATLEFKEIAISATELRKMLELREY 173

Query: 180 LNAAHLLGYRF 190
                 +    
Sbjct: 174 ATLKKWIPQEI 184


>gi|219122507|ref|XP_002181585.1| riboflavin kinase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406861|gb|EEC46799.1| riboflavin kinase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 150

 Score = 36.3 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 34/115 (29%), Gaps = 36/115 (31%)

Query: 189 RFTIESDVIHGEKIGRT-LGFPTANMQ---------------LSPDIL----LKEGVYAI 228
              + S V  G   G + LG PTAN+                L  DI     L  G+Y  
Sbjct: 22  PLRMMSKVARGFGRGSSDLGIPTANLDRDALQVARPKNAGGILHDDIPSFDGLPCGIYWG 81

Query: 229 RFRTQDQ---------------TSYSGVANFGRNPTMVPNGPLLLESFIFDFSQE 268
             R  +                  Y+   + G NPT   N    +E      S +
Sbjct: 82  FARVGENPKFVGKEAEGGSSFSGVYAAAVSIGYNPTYN-NETKTIEPHFIAPSSD 135


>gi|197249991|ref|YP_002145182.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|226700764|sp|B5F832|PANC_SALA4 RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|197213694|gb|ACH51091.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 284

 Score = 36.3 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|326499506|dbj|BAJ86064.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 421

 Score = 36.3 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S +     I  +  P    +P + +  ++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDQLIVGVVSDD----EITANKGPPV--TPLNERMVMVGA 115

Query: 85  MG-FSALI---RYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +     +I    Y  T +  N    ++    ++   +   +  GT        AG     
Sbjct: 116 VKWVDDVIPDAPYAITEDFMNKLFTEYNIDYIIHGDDPCLLPDGTDAYALAKNAG---RY 172

Query: 141 QKRGEKYGFHTVFI 154
           ++     G  T  I
Sbjct: 173 KQIKRTEGVSTTDI 186


>gi|157138070|ref|XP_001657223.1| hypothetical protein AaeL_AAEL003770 [Aedes aegypti]
 gi|108880707|gb|EAT44932.1| conserved hypothetical protein [Aedes aegypti]
          Length = 507

 Score = 36.3 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD IH GH ++L QA  +A    +  ++        I+S      + P   + + +  
Sbjct: 144 GTFDRIHAGHKVLLSQAALLAEERLVVGVTDENM----IKSKKLWELIQPTERRIEDVRA 199

Query: 85  M--GFSALIRYK 94
                   +RY+
Sbjct: 200 FLEDVDRTLRYE 211


>gi|325954592|ref|YP_004238252.1| cytidyltransferase-related domain protein [Weeksella virosa DSM
           16922]
 gi|323437210|gb|ADX67674.1| cytidyltransferase-related domain protein [Weeksella virosa DSM
           16922]
          Length = 147

 Score = 36.3 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 25/157 (15%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           +    FD +H GH  +LE A    +   + + + +P   TI +      T +      ++
Sbjct: 8   ITFSAFDLLHAGHVKMLEDAKAQCDYLIVGLQT-DP---TIDRPEKNRPTQTVVERYIQL 63

Query: 82  LEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQ 141
                   ++ Y    +      E  ++   ++       I G +++  K+  G     +
Sbjct: 64  KACKYIDEIVPYATEQDL-----EDILRSFKID-----VRILGEEYKD-KNFTG-----R 107

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           +  E+ G          N++    SS+++R  + +  
Sbjct: 108 EYCEEKGIEL-----YYNSRDHRFSSTSLRKVVFEKE 139


>gi|187251304|ref|YP_001875786.1| putative nicotinate-nucleotide adenylyltransferase [Elusimicrobium
           minutum Pei191]
 gi|186971464|gb|ACC98449.1| Nicotinate nucleotide adenylyltransferase family protein
           [Elusimicrobium minutum Pei191]
          Length = 375

 Score = 36.3 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 21/165 (12%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +H GH  +L+ A+K      I ++     P     S     + +P  ++  ++ +
Sbjct: 8   GSFDPVHRGHTALLKAAVKEIKPDIIHII-----PA--FHSPFKERSNTPFDLRMDMVRQ 60

Query: 85  MGFSALIRYKFT----LETANYSAEQFIQKVLVEWLEVK-TVITGTKFRFGKDRAGDRGI 139
                 +   F      +     A Q ++ +   +   K  ++ GT       +  +   
Sbjct: 61  AFKDIKVNIIFDNFEQRQNKKTFAWQNVEHIKKTYENPKIFMLVGTDALNDIPKWSNPEY 120

Query: 140 LQK-----RGEKYGFHTVFIDELRNN----KSQIVSSSNIRTALT 175
           L K      G++ G         + +    +   +SSS IR  + 
Sbjct: 121 LFKNVIVVAGKRVGLAAEEKLPFKYHTLKARLPRISSSQIRLEIM 165


>gi|149640272|ref|XP_001511619.1| PREDICTED: similar to MOX-2 homeobox [Ornithorhynchus anatinus]
          Length = 184

 Score = 36.3 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 288 FKDIEKLKIYMGEDEKKARKILESSYPLSERDRI 321
           F  +E     M  D K A+   + S+P S ++ +
Sbjct: 10  FSSVETAGKQMEADVKAAKSFFQVSHPFSTKESL 43


>gi|71748856|ref|XP_823483.1| cholinephosphate cytidylyltransferase A [Trypanosoma brucei
           TREU927]
 gi|70833151|gb|EAN78655.1| cholinephosphate cytidylyltransferase A, putative [Trypanosoma
           brucei]
          Length = 506

 Score = 36.3 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 14/103 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD  H GH   L+ A+   N   + V   +         +     +     +      
Sbjct: 359 GVFDLCHAGHKNFLQNALLYGNRLIVGVCGDDE------CEAYKRRPIMTVDER------ 406

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
              + +   KF  +    S    + + +++   +  V+ G ++
Sbjct: 407 --VNEVKMCKFVSQVIRNSPVTGVTEEMIKRYNIHVVVCGDEY 447


>gi|222823284|ref|YP_002574857.1| sulfate adenylyltransferase, [Campylobacter lari RM2100]
 gi|222538505|gb|ACM63606.1| sulfate adenylyltransferase, putative [Campylobacter lari RM2100]
          Length = 386

 Score = 36.3 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 27/184 (14%)

Query: 2   HVFHNI-----EINQSLPNHLKGGVVA--IGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
            ++HN      E  + +   L    +   + +FD  H  H  IL  AI+ ++     V+ 
Sbjct: 126 EIYHNRIKAIKEDFEKIKKRLNPSNITAIVSSFDPFHRAHERILRWAIEQSD----LVII 181

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEK--MGFSALIRYK------FTLETANYSAEQ 106
           F      I    S   +L        +  +  +  S ++         F           
Sbjct: 182 F-----LIESYESNGLSLKLKKRCFDVFAQNYLPSSRVLLIPLQNIKIFASHLNPVLECA 236

Query: 107 FIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIV 165
             +      L V     G    F ++RA     L    + Y      + E +  ++ +++
Sbjct: 237 LAKSFDCNKLFVGQNHAGLGMYFNQNRAFTV--LDDFAKDYNIEVTILPEFVFCDECKMI 294

Query: 166 SSSN 169
            S+ 
Sbjct: 295 VSTK 298


>gi|298245792|ref|ZP_06969598.1| rfaE bifunctional protein [Ktedonobacter racemifer DSM 44963]
 gi|297553273|gb|EFH87138.1| rfaE bifunctional protein [Ktedonobacter racemifer DSM 44963]
          Length = 171

 Score = 36.3 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 17/121 (14%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +HLGH   L++A  + +   + + S +   R +   + P   L P   
Sbjct: 30  ERAVFTNGCFDLLHLGHIRYLQEARSLGDFLILGLNS-DESVRHLKGPTRP---LVPELE 85

Query: 78  QEKILEKMG-FSALIRY---KFTLETANYSAEQF---------IQKVLVEWLEVKTVITG 124
           + ++L  +     +  +     +   A      +         +  V  E L    ++ G
Sbjct: 86  RAELLAALACIDYVTIFGEPTASELIATLEPAIYVKGGDYAGSVHGVDPEKLPEARIVFG 145

Query: 125 T 125
            
Sbjct: 146 Y 146


>gi|256833309|ref|YP_003162036.1| pantoate/beta-alanine ligase [Jonesia denitrificans DSM 20603]
 gi|256686840|gb|ACV09733.1| pantoate/beta-alanine ligase [Jonesia denitrificans DSM 20603]
          Length = 302

 Score = 36.3 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 51/174 (29%), Gaps = 34/174 (19%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+ +G    +H GH  ++  A + A+     +++   +P                  
Sbjct: 40  RAVVMTMG---ALHEGHMALVRAARQRADE---VIVTIFVNPLQFGPGEDFDAYPRTEDA 93

Query: 78  QEKILEKMGFSALIRYKFTLETANYSA-EQFIQKVLVEWLE------------------- 117
              +L +    A+    F    A+       + +V    L                    
Sbjct: 94  DVALLAREQVDAV----FVPSVADMYPGGDPLVRVTAGELGRIYEGAARPGHFDGMLTVV 149

Query: 118 VKTVIT-GTKFR-FGKDRAGDRGILQKRGEKYGFHTVF--IDELRNNKSQIVSS 167
            K ++        FG+  A    ++++  +          +  +R +    +SS
Sbjct: 150 AKLLVLTAPDVAFFGEKDAQQLLLIKRMVKDLSLDVEIAPVPLVREDSGLALSS 203


>gi|50954665|ref|YP_061953.1| pantetheine-phosphate adenylyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
 gi|61212562|sp|Q6AFJ7|COAD_LEIXX RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|50951147|gb|AAT88848.1| pantetheine-phosphate adenylyltransferase [Leifsonia xyli subsp.
           xyli str. CTCB07]
          Length = 159

 Score = 36.3 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 28/156 (17%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD + LGH  ++E+A ++ +   + V         +         L P + +  
Sbjct: 5   AVVPGSFDPVTLGHLDVIERAARMWDEVHVLV---------VHNPDKSA--LLPIAQRVA 53

Query: 81  IL----EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +L    E  G +  I        A++S    +       +    ++ G + +        
Sbjct: 54  LLDRSIEDAGIAGNIV-------ASWSVGLLVDYCT--DIGAHVLVKGIRSQVDV----A 100

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
                    ++      +  L N  +  VSSS +R 
Sbjct: 101 YETPMAIVNRHLAEVETVFLLPNPANAHVSSSLVRQ 136


>gi|300692717|ref|YP_003753712.1| cytidylyltransferase (aut gene) [Ralstonia solanacearum PSI07]
 gi|299079777|emb|CBJ52454.1| putative Cytidylyltransferase (aut gene) [Ralstonia solanacearum
           PSI07]
          Length = 166

 Score = 36.3 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 8/95 (8%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH   L QA  +  +  + V + +   R + +       L+    
Sbjct: 30  RPIVFTNGVFDILHRGHATYLAQARALGASLVVGVNT-DASVRMLGKGDDRP--LNMQDD 86

Query: 78  QEKILEKMGFSALIRYKFTLETANYSAEQFIQKVL 112
           +  +L  +   +L+        A  +  + IQ+V 
Sbjct: 87  RLAVLAALESVSLVVL-----FAERTPVELIQRVR 116


>gi|120553719|ref|YP_958070.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Marinobacter aquaeolei VT8]
 gi|150383471|sp|A1TYR4|HLDE_MARAV RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|120323568|gb|ABM17883.1| D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose
           1-phosphate adenylyltransferase [Marinobacter aquaeolei
           VT8]
          Length = 481

 Score = 36.3 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 33/147 (22%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------S 73
           V   G FD +H GH   L QA  + +   +            + S + +  L       +
Sbjct: 346 VFTNGCFDILHAGHVRYLAQARALGDRLVVG-----------LNSDASVRRLKGEERPVN 394

Query: 74  PPSIQEKILEKMG-FSALIRYKF-TLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGK 131
               + ++L  +     +I   F      N + EQ I     + +  + +  G  +    
Sbjct: 395 SLEDRMEVLSALACVDWVI--PFGDNTVENDTPEQLI-----KRVNPQVLAKGGDYSI-- 445

Query: 132 DRAGDRGILQKRGEKYGFHTVFIDELR 158
               D  +     ++ G     +  + 
Sbjct: 446 ----DTIVGADFVQENGGEVAILPTVE 468


>gi|261880069|ref|ZP_06006496.1| pantoate-beta-alanine ligase [Prevotella bergensis DSM 17361]
 gi|270333223|gb|EFA44009.1| pantoate-beta-alanine ligase [Prevotella bergensis DSM 17361]
          Length = 280

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 58/196 (29%), Gaps = 39/196 (19%)

Query: 1   MHVFHNIEINQSLPNHLK------GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M V   I+  + +    +      G V  +G    +H GH  ++ +++   + + ++V  
Sbjct: 1   MQVVKTIQEVREIVKGWRKEGLSVGLVPTMGF---LHEGHQSLIAKSVADNDRTVVSVFV 57

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLV- 113
              +P     S          +     +E MG   +    F  E +      F   V   
Sbjct: 58  ---NPIQFGPSEDLEAYPRDLNHDMAAVEAMGGDLI----FNPEPSEMYPAHFTTFVDTT 110

Query: 114 -------------EWLEVKTVI------TGTK-FRFGKDRAGDRGILQKRGEKYGFHTVF 153
                         +  V TV+       G     FG+  A     +++      F    
Sbjct: 111 ETTELLCGARRAGHFRGVCTVVSKLFNIVGPDRAYFGQKDAQQLATVRRFVRDLNFDLEI 170

Query: 154 I--DELRNNKSQIVSS 167
           I    +R       SS
Sbjct: 171 IACPIVREADGLAKSS 186


>gi|229544026|ref|ZP_04433085.1| pantoate/beta-alanine ligase [Bacillus coagulans 36D1]
 gi|229325165|gb|EEN90841.1| pantoate/beta-alanine ligase [Bacillus coagulans 36D1]
          Length = 287

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 18/120 (15%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  + +QA K  +   I ++S   +P     +             
Sbjct: 31  GFVPTMGY---LHEGHLALAKQARKEND---IVIMSIFVNPLQFGPNEDFDRYPRDAEGD 84

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
               E  G   L    F              ++ V          GT    G+ R G   
Sbjct: 85  RHKAEAAGVDVL----FIPSVKEMYPRALSVQMTVTK--------GTDVLCGRKRPGHFD 132


>gi|119963193|ref|YP_945948.1| ADP-heptose synthase [Arthrobacter aurescens TC1]
 gi|119950052|gb|ABM08963.1| ADP-heptose synthase [Arthrobacter aurescens TC1]
          Length = 525

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 26/141 (18%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           K  V+  G FD +H GH   L QA ++ +   +  L+ +   R +     P+   +  + 
Sbjct: 385 KRIVLTNGCFDVLHRGHTRYLNQAKQLGD-VLVVALNSDSSVRKLKGPDRPV---NHEAD 440

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  ++  +     +    F       +    I  +  +              + K     
Sbjct: 441 RAAVIAALSCVDHVTV--FDTP----TPIPLIDLLRPD-------------VYAKGGDYT 481

Query: 137 RGILQ--KRGEKYGFHTVFID 155
             +LQ  +  E+YG     +D
Sbjct: 482 PEMLQETEAVERYGGTVTILD 502


>gi|91200548|emb|CAJ73597.1| strongly similar to pantoate--beta-alanine ligase from
           Corynebacterium glutamicum (strain ATCC 13032)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 290

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 78/238 (32%), Gaps = 47/238 (19%)

Query: 1   MHVFHNIEINQSL------PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLS 54
           M +  +++  +S+       N L G V  +G    +H GH  ++ QA    +     V+S
Sbjct: 1   MQITSSLDEIRSIVKAAKKNNLLIGFVPTMG---ALHEGHLSLIRQARTEND---TVVVS 54

Query: 55  FNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVE 114
              +P    ++              +IL K G + L    F  + +    + F   V+ E
Sbjct: 55  IFINPIQFGRNEDFTQYPRMFDTDCEILLKEGVNVL----FNPKASEMYPDGFCTTVVPE 110

Query: 115 WLEVKTVITGTKFRFGKDRAGDRGILQ---------KRGEKYGFHTVFI----------- 154
            LE K  + G   R G  R     +L+             +  F    +           
Sbjct: 111 HLEDK--LCGK-SRPGHFRGVATVVLKLFNLIQPDSAYFGQKDFQQTVVISRMAADLNLD 167

Query: 155 ------DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                   +R+ +   +SS N    L++    +A  L       +  V  GE     +
Sbjct: 168 VNIKVLPTVRDKEELALSSRN--AYLSETEKKDARCLYQALIKAKDMVNAGENNAGEI 223


>gi|333010629|gb|EGK30062.1| pantoate--beta-alanine ligase [Shigella flexneri VA-6]
          Length = 283

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 39/218 (17%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHNGHMKLVDEAKARAD---VVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR--AGDRGIL 140
            K     +    F                 V+   + T++ G   R G  R  +     L
Sbjct: 83  NKRKVDLV----FAPSVKEIYPNGTETHTYVDVPGLSTMLEGA-SRPGHFRGVSTIVSTL 137

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE 200
                   F+ V  D     +      + IR  +           +G+   I    I   
Sbjct: 138 --------FNLVQPDIACFGEKDFQQLALIRKMVAD---------MGFDIEIVGVPIMRA 180

Query: 201 KIGRTL----GFPTANMQLSPDILLKEGVYAIRFRTQD 234
           K G  L    G+ TA         +  G+Y +     D
Sbjct: 181 KDGLALSSRNGYLTA-----EQRKIAPGLYKVLSSIAD 213


>gi|330963743|gb|EGH64003.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 474

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   + V        ++ +   P  
Sbjct: 332 DDARAHKEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAV----NDDASVSRLKGPGR 387

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 388 PINSADRRMAVLAGLGAVDWVISFP------EGTPENLLTHV-----KPDVLVKGGDY-- 434

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 435 GIDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKI 470


>gi|293364743|ref|ZP_06611460.1| pantetheine-phosphate adenylyltransferase [Streptococcus oralis
           ATCC 35037]
 gi|307702990|ref|ZP_07639937.1| pantetheine-phosphate adenylyltransferase [Streptococcus oralis
           ATCC 35037]
 gi|291316193|gb|EFE56629.1| pantetheine-phosphate adenylyltransferase [Streptococcus oralis
           ATCC 35037]
 gi|307623383|gb|EFO02373.1| pantetheine-phosphate adenylyltransferase [Streptococcus oralis
           ATCC 35037]
          Length = 162

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 27/153 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  I+E+A K+ +   + V  +NPH +  +          P   +++ ++K
Sbjct: 10  GSFDPMTNGHLDIIERASKLFDKLYVGVF-YNPHKQGFL----------PVENRKRAVKK 58

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVE---WLEVKTVITGTKFRFGKDRAGDRGILQ 141
                          AN        +++V+    L  KT++ G +               
Sbjct: 59  A----------VAHLANVEVLASHDQLVVDVARRLGAKTLVRGLRNATDLQYESSFDY-- 106

Query: 142 KRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
               +       I      +   +SSS +R  L
Sbjct: 107 -YNHQLAPEIETIYLYSRQEHLYISSSAVRELL 138


>gi|227876371|ref|ZP_03994483.1| pantoate--beta-alanine ligase [Mobiluncus mulieris ATCC 35243]
 gi|227842912|gb|EEJ53109.1| pantoate--beta-alanine ligase [Mobiluncus mulieris ATCC 35243]
          Length = 279

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 61/216 (28%), Gaps = 31/216 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +    E   +    + G    V+ +G    +H GH  ++  A   A+   +TV     
Sbjct: 1   MQILKTREELAAWRETVSGTLGLVMTMG---ALHEGHLELVRAAQDFADTVLVTVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL------IRYKFTLETANYSAEQFIQKV 111
           +P                    + L + G  AL      + Y        +      + +
Sbjct: 55  NPTQFAPGEDFETYPRDLESDAEKLRQEGVDALFAPTPEVMYPEGEAQVRFDPGPAAKIL 114

Query: 112 LVEWLEVKT----VITGTKFR--------FGKDRAGDRGILQKRGEKYGFHT--VFIDEL 157
             +          ++ G  F         FG+  A    I+ +  +   F    V ++  
Sbjct: 115 EGKTRPTHFAGVLLVVGKMFHLTRPDIACFGRKDAQQLAIVTQMVKDLDFSVQIVPVEIC 174

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           R      +SS N    L+      A  L        
Sbjct: 175 REEDGLAMSSRN--RYLSTAQRETALELSRSLQWGV 208


>gi|116197811|ref|XP_001224717.1| hypothetical protein CHGG_07061 [Chaetomium globosum CBS 148.51]
 gi|88178340|gb|EAQ85808.1| hypothetical protein CHGG_07061 [Chaetomium globosum CBS 148.51]
          Length = 434

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 18/146 (12%)

Query: 7   IEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSS 66
           +      P  L G +   G FD  H GH   + QA ++ +   + V     H    I  +
Sbjct: 8   LPPGDPAPELLDGRLWVDGCFDFFHHGHAGAVVQARQLGDELYVGV-----HSDEAILEN 62

Query: 67  SPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
                 +  +++E++L      A      T   A+      +  +       + V+ G  
Sbjct: 63  KGP---TVMNLKERLLA---IDACRWV--TKSIAHAPYVTQLDWIS--HFGCRYVVHGDD 112

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTV 152
                  +G     +       F  V
Sbjct: 113 IT---SDSGGEDCYRFVKAADRFRVV 135


>gi|116629812|ref|YP_814984.1| phosphopantetheine adenylyltransferase [Lactobacillus gasseri ATCC
           33323]
 gi|238853443|ref|ZP_04643822.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           202-4]
 gi|282851682|ref|ZP_06261047.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           224-1]
 gi|311110546|ref|ZP_07711943.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           MV-22]
 gi|122273250|sp|Q042S6|COAD_LACGA RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|116095394|gb|ABJ60546.1| Phosphopantetheine adenylyltransferase [Lactobacillus gasseri ATCC
           33323]
 gi|238834015|gb|EEQ26273.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           202-4]
 gi|282557650|gb|EFB63247.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           224-1]
 gi|311065700|gb|EFQ46040.1| pantetheine-phosphate adenylyltransferase [Lactobacillus gasseri
           MV-22]
          Length = 166

 Score = 36.3 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 29/154 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  ++E A ++     + +++           ++    L     +  + +K
Sbjct: 8   GSFDPITNGHAEVVEAAARMFEKLYVVIMT-----------NTSKKYLFDEKERLDLAKK 56

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
                +      +E     AE  ++  +   L    ++ G    T F + +D AG    L
Sbjct: 57  -----VFENDKNIEVIARPAELTVE--VAHELNAGAIVRGLRNTTDFNYERDIAGINKTL 109

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
             +          +      +   +SSS I+  +
Sbjct: 110 DPKLN-------TVLLFTRPEDSFISSSMIKETV 136


>gi|283834466|ref|ZP_06354207.1| glycerol-3-phosphate cytidyltransferase [Citrobacter youngae ATCC
          29220]
 gi|291070013|gb|EFE08122.1| glycerol-3-phosphate cytidyltransferase [Citrobacter youngae ATCC
          29220]
          Length = 134

 Score = 35.9 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
            ++  G FD  H+GH  ILE+A ++     + V
Sbjct: 2  KTIITFGTFDVFHIGHLRILERAGQLGERLIVGV 35


>gi|226532090|ref|NP_001147323.1| bifunctional coenzyme A synthase [Zea mays]
 gi|195609914|gb|ACG26787.1| bifunctional coenzyme A synthase [Zea mays]
 gi|195651859|gb|ACG45397.1| bifunctional coenzyme A synthase [Zea mays]
          Length = 223

 Score = 35.9 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 12/163 (7%)

Query: 20  GVVAIG-NFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
             V IG  FD +H GHHL L+ A ++A    +  +   P     +        + P   +
Sbjct: 47  AAVVIGGTFDRLHQGHHLFLKAAAELARERIVVGVCDGPM----LAKKQYADLIQPIEKR 102

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG 138
            +  +      +   K  L+             +V+   ++ +I   +   G   A +R 
Sbjct: 103 MQNAK----DYIKSIKPDLDVHVEPIVDPFGPSIVDP-GLEAIIVSKETLPG-GHAVNRK 156

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLN 181
             ++   +     + +     +    +SS+  R    +  +  
Sbjct: 157 RAERGLTQLQIEVIELVP-EESTGDKISSTAFRKMEAERALQQ 198


>gi|83309161|ref|YP_419425.1| ADP-heptose synthase [Magnetospirillum magneticum AMB-1]
 gi|82944002|dbj|BAE48866.1| ADP-heptose synthase [Magnetospirillum magneticum AMB-1]
          Length = 518

 Score = 35.9 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 24/160 (15%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +HLGH   +           I  ++          +  P   +   +++ +
Sbjct: 37  VLCHGVFDLVHLGH---VRHVEAARREGDILFVTLT---ADRFVNKGPGRPIFSENMRAE 90

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF-RFGKDRAGDRG 138
           +L  +     +            SAE  +  +  +       + G+ +    +D  G   
Sbjct: 91  MLAALACVDGVGVNH------GSSAESVLDAIKPDIY-----VKGSDYENPDEDITGKIN 139

Query: 139 ILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++  E++G   VF  ++        SSS I   L    
Sbjct: 140 SEREAVERHGGRVVFTKDIT-----FSSSSLINRYLDVYD 174


>gi|238782717|ref|ZP_04626747.1| Transcriptional regulator nadR [Yersinia bercovieri ATCC 43970]
 gi|238716377|gb|EEQ08359.1| Transcriptional regulator nadR [Yersinia bercovieri ATCC 43970]
          Length = 425

 Score = 35.9 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 61/166 (36%), Gaps = 15/166 (9%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   + +    P  R + ++SS    
Sbjct: 58  EFPRREKKVGVVFGKFYPLHTGHIFLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQ 117

Query: 72  LSPPSIQEKILEKMGFSA---LIRYKFTLETANYSAEQF--IQKVLVEWLEVKTVITGTK 126
            +  S + + L +  F     +  + F           +    + + +++  K+++    
Sbjct: 118 PT-VSDRLRWLLQT-FKYQKNIHIHSFDEHGIEPYPHGWDVWSRGVKKFMAEKSIVPSFI 175

Query: 127 FRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           +      + +     +  E+ G  T+ ID  R+     +S   IR 
Sbjct: 176 Y------SSESQDAPRYREQLGIETILIDPQRSF--MNISGRQIRR 213


>gi|300728508|ref|ZP_07061867.1| cytidylyltransferase domain protein [Prevotella bryantii B14]
 gi|299774226|gb|EFI70859.1| cytidylyltransferase domain protein [Prevotella bryantii B14]
          Length = 449

 Score = 35.9 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 40/157 (25%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVL--SFNPHPRTIIQSSSPIFTLSPPSIQ 78
           V+  G +D +H GH  +L +A ++ +   + V   SF+       +    +   +    +
Sbjct: 4   VITYGTYDLLHQGHINLLRRAKELGDYLIVGVTNDSFD-------RERGKLNVRNNVLER 56

Query: 79  EKILEKMGF-SALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGTKFRFGKDRAG 135
            + ++  GF   +I             E ++ +    ++  +V     G+ +       G
Sbjct: 57  VEAVKATGFADQIII------------EDYVGQKIDDIQKYDVDIFAIGSDW------EG 98

Query: 136 DRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
               L +  +      V++      +++ +SS+ +R 
Sbjct: 99  KFDYLNEFCK-----VVYLP-----RTEGISSTMLRD 125


>gi|213425910|ref|ZP_03358660.1| pantoate--beta-alanine ligase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 209

 Score = 35.9 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + ++S   +P    +    +          + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVIVSIFVNPMQFDRPDDLVRYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG 124
            K     +    F         +    +  V+   + T++ G
Sbjct: 83  NKRKVDYV----FAPAVEEIYPQGLEGQTYVDVPGLSTMLEG 120


>gi|331666537|ref|ZP_08367411.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA271]
 gi|331065761|gb|EGI37645.1| glycerol-3-phosphate cytidyltransferase [Escherichia coli TA271]
          Length = 131

 Score = 35.9 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
            V+  G FD  H+GH  +L++A  +     + V
Sbjct: 2  KTVITFGTFDVFHVGHLRLLQRARTLGARLLVGV 35


>gi|297560536|ref|YP_003679510.1| cytidyltransferase-related domain protein [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296844984|gb|ADH67004.1| cytidyltransferase-related domain protein [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 501

 Score = 35.9 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 10/111 (9%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +H GH  +L +A  + +   + +L+ +   R +  S  P+        
Sbjct: 319 ERVVATGGCFDVLHAGHVDLLRRARALGDRL-VVLLNSDASVRALKGSGRPVVA---EQD 374

Query: 78  QEKILEKMG-FSALIRYKFT---LETANYSAEQFIQ--KVLVEWLEVKTVI 122
           + ++L  +     ++ +              + +++     VE L    V+
Sbjct: 375 RARVLGALDCVDEVVVFDEDTPVRALEELRPDVWVKGGDYEVEDLPETPVV 425


>gi|171464248|ref|YP_001798361.1| rfaE bifunctional protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193786|gb|ACB44747.1| rfaE bifunctional protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 162

 Score = 35.9 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           E+   + +  +  V   G FD +H GH   L QA  +  +  + V S +   + + +   
Sbjct: 18  ELADRIASLPRPLVFTNGVFDILHRGHASYLAQARALGASLVVGVNS-DTSVKILGKGDD 76

Query: 68  PIFTLSPPSIQEKILEKMG-FSALIRYKFTLE 98
               ++  + ++ +L  +      +   FT +
Sbjct: 77  RP--INTEADRQALLAALESVDMAVL--FTEQ 104


>gi|20094224|ref|NP_614071.1| cytidylyltransferase domain/nucleotidyltransferase
          domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887252|gb|AAM02001.1| Protein containing cytidylyltransferase domain and predicted
          nucleotidyltransferase (HIG superfamily) domain
          [Methanopyrus kandleri AV19]
          Length = 427

 Score = 35.9 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 14/71 (19%)

Query: 27 FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS---PIFTLSPPSIQEKILE 83
          FD  H GH  +L++A  + +     V+         + +         L P  ++ +I+ 
Sbjct: 10 FDPPHRGHAYLLDRARDLGDE---VVV--------FLNADYTAHHTPPLLPYRLRREIVL 58

Query: 84 KMGFSALIRYK 94
          ++G   +I  +
Sbjct: 59 ELGADEVIPVR 69


>gi|269975935|ref|ZP_06182939.1| pantoate--beta-alanine ligase [Mobiluncus mulieris 28-1]
 gi|306817263|ref|ZP_07451009.1| pantoate-beta-alanine ligase [Mobiluncus mulieris ATCC 35239]
 gi|307700440|ref|ZP_07637479.1| pantoate--beta-alanine ligase [Mobiluncus mulieris FB024-16]
 gi|269935763|gb|EEZ92293.1| pantoate--beta-alanine ligase [Mobiluncus mulieris 28-1]
 gi|304649943|gb|EFM47222.1| pantoate-beta-alanine ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614425|gb|EFN93655.1| pantoate--beta-alanine ligase [Mobiluncus mulieris FB024-16]
          Length = 279

 Score = 35.9 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 61/216 (28%), Gaps = 31/216 (14%)

Query: 1   MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
           M +    E   +    + G    V+ +G    +H GH  ++  A   A+   +TV     
Sbjct: 1   MQILKTREELAAWRETVSGTLGLVMTMG---ALHEGHLELVRAAQDFADTVLVTVFV--- 54

Query: 58  HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSAL------IRYKFTLETANYSAEQFIQKV 111
           +P                    + L + G  AL      + Y        +      + +
Sbjct: 55  NPTQFAPGEDFETYPRDLESDAEKLRQEGVDALFAPTPEVMYPEGEAQVRFDPGPAAKIL 114

Query: 112 LVEWLEVKT----VITGTKFR--------FGKDRAGDRGILQKRGEKYGFHT--VFIDEL 157
             +          ++ G  F         FG+  A    I+ +  +   F    V ++  
Sbjct: 115 EGKTRPTHFAGVLLVVGKMFHLTRPDIACFGRKDAQQLAIVTQMVKDLDFSVQIVPVEIC 174

Query: 158 RNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIE 193
           R      +SS N    L+      A  L        
Sbjct: 175 REEDGLAMSSRN--RYLSTAQRETALELSRSLQWGV 208


>gi|119475360|ref|ZP_01615713.1| LPS biosynthesis protein RfaE [marine gamma proteobacterium
           HTCC2143]
 gi|119451563|gb|EAW32796.1| LPS biosynthesis protein RfaE [marine gamma proteobacterium
           HTCC2143]
          Length = 476

 Score = 35.9 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +    H +  V   G FD +H GH   LEQA ++ +   +  ++ +     +     P  
Sbjct: 333 EDARAHGERVVFTNGCFDILHPGHAGYLEQARELGDRL-VVAVNGDDSISRLKGPGRP-- 389

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++P   +  +L K+     +I           S +      L+E L+   +  G  +  
Sbjct: 390 -INPVDSRMALLSKLESVDWVI-----------SFDDDTPAHLLEVLKPDILAKGGDY-- 435

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
             ++    G   +  E YG     +           S+++I   + + +
Sbjct: 436 --NKENVVG--WELVEGYGGKVEVLTLF-----DSFSTTSIVEKVLEKN 475


>gi|156844356|ref|XP_001645241.1| hypothetical protein Kpol_1060p39 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115900|gb|EDO17383.1| hypothetical protein Kpol_1060p39 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 509

 Score = 35.9 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 35/176 (19%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +  +A + AN   +       HP   +     I   +   + ++I+++   G 
Sbjct: 201 MHRAHRELTVRAAREANAKILI------HPVVGLTKPGDIDHHTRVRVYQEIVKRYPSGL 254

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF-GKDRAG-------DRGI 139
           + L      +  A    E     ++ +       I G      GK+  G       D  +
Sbjct: 255 ADLSLLPLAMRMAG-DREAVWHAIIRKNYGATHFIVGRDHAGPGKNSKGVDFYGPYDAQL 313

Query: 140 L-QKRGEKYGFHTV---------------FIDELRNNKSQ--IVSSSNIRTALTKG 177
           L +    +     V                IDE+   K +   +S + +R  L  G
Sbjct: 314 LVESYKNELNIEVVPFRMVTYLPDEDRYAPIDEIDTTKVKTLNISGTELRKRLRDG 369


>gi|308183012|ref|YP_003927139.1| ADP-heptose synthase [Helicobacter pylori PeCan4]
 gi|308065197|gb|ADO07089.1| ADP-heptose synthase [Helicobacter pylori PeCan4]
          Length = 463

 Score = 35.9 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 47/127 (37%), Gaps = 28/127 (22%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRT 61
           ++ ++L +H +  V   G FD +H GH   L++A  + +      NS +++         
Sbjct: 320 KLLETLEHHQQKVVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDVSI--------K 371

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
            ++       +     +  +L  +     ++ ++                 L++ L+   
Sbjct: 372 RLKGDKRP--IVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDI 418

Query: 121 VITGTKF 127
           ++ G  +
Sbjct: 419 LVKGADY 425


>gi|225439049|ref|XP_002265255.1| PREDICTED: similar to Os11g0123400 isoform 3 [Vitis vinifera]
          Length = 341

 Score = 35.9 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 11/102 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +H GH   L QA  + +   + V+S       I  +  P    +P + +  ++  
Sbjct: 62  GCFDMMHYGHCNALRQARALGDQLVVGVVSD----AEITANKGPPV--TPLNERMIMVS- 114

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTK 126
            G   +         A    E F++K+  +   +  +I G  
Sbjct: 115 -GVKWVDEVIPDAPYAIT--EDFMKKLF-DEYNIDYIIHGDD 152


>gi|293335705|ref|NP_001169111.1| hypothetical protein LOC100382955 [Zea mays]
 gi|223974991|gb|ACN31683.1| unknown [Zea mays]
          Length = 453

 Score = 35.9 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 18/142 (12%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
           +  P   +G +   G FD  H GH   + QA ++ N     V     H    I ++    
Sbjct: 20  EPAPELYEGRIWVDGCFDFFHHGHAGAIVQARQLGNELYAGV-----HSDEAILANKGP- 73

Query: 71  TLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           T+   + +   L        +    T   A+  A        +     K V+ G      
Sbjct: 74  TVMNLAER---LAATDACRWV----TRSVAH--APYVTSLPYISHYGCKYVVHGDDIT-- 122

Query: 131 KDRAGDRGILQKRGEKYGFHTV 152
            D  G+    +   E   F  V
Sbjct: 123 SDSDGN-DCYRFVKEAGRFKVV 143


>gi|325958260|ref|YP_004289726.1| cytidyltransferase-related domain-containing protein
          [Methanobacterium sp. AL-21]
 gi|325329692|gb|ADZ08754.1| cytidyltransferase-related domain protein [Methanobacterium sp.
          AL-21]
          Length = 430

 Score = 35.9 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 27 FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
          FD +HLGH  ++++A ++A+     V+ +    +    + +P F       +  +  + G
Sbjct: 8  FDPVHLGHVKLIDKARELADKKNEDVVIYLN--KGFSANHAPFFVSYDARRRMAL--EAG 63

Query: 87 FSALIRYK 94
             +I  +
Sbjct: 64 ADEVIPIE 71


>gi|295692718|ref|YP_003601328.1| phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           ST1]
 gi|295030824|emb|CBL50303.1| Phosphopantetheine adenylyltransferase [Lactobacillus crispatus
           ST1]
          Length = 161

 Score = 35.9 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH    ++A +I +   +  ++           ++    L  P  +  ++  
Sbjct: 8   GSFDPITNGHVETAKKAAEIFDKVYVVAMT-----------NTAKKYLFTPEERADLIR- 55

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGDRGIL 140
               AL      +E      E  +   L   L  K ++ G      FR+ ++ AG     
Sbjct: 56  ---DALKEIP-NIEVLERPEEVTVN--LAHELHAKVMVRGVRNSADFRYEQEIAG----- 104

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTA 173
               +K       +    + ++  V+SS I+  
Sbjct: 105 --INKKLAPDVNTVLLFASPENSFVASSMIKEL 135


>gi|213407698|ref|XP_002174620.1| sulfate adenylyltransferase [Schizosaccharomyces japonicus yFS275]
 gi|212002667|gb|EEB08327.1| sulfate adenylyltransferase [Schizosaccharomyces japonicus yFS275]
          Length = 492

 Score = 35.9 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 9/120 (7%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKM--GF 87
           +H  H  +    ++ A     +VL    HP   +     I   +   + E I+++   G 
Sbjct: 201 MHRAHREL---TVRAAKQHKASVLI---HPVVGMTKPGDIDHFTRVRVYETIIQRYPKGT 254

Query: 88  SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKY 147
           + L      +  A    E     ++         I G         +           +Y
Sbjct: 255 AKLSLLPLAMRMAG-PREALWHAIIRRNYGATHFIVGRDHAGPGKNSKGEDFYGPYDAQY 313


>gi|325983713|ref|YP_004296115.1| Pantothenate synthetase [Nitrosomonas sp. AL212]
 gi|325533232|gb|ADZ27953.1| Pantothenate synthetase [Nitrosomonas sp. AL212]
          Length = 274

 Score = 35.9 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 51/238 (21%)

Query: 1   MHVFHNIEINQSLPNHLKGGVV--AIGNFDGIHLGHHLILEQAIKIANNSPITVLS---- 54
           M +  +I          +G      +GN   +H GH  +++QA ++A+     V+S    
Sbjct: 1   MKIITDISSLHKNLCRKQGIAFVPTMGN---LHAGHLALIDQAKQLAD---CVVVSIFVN 54

Query: 55  ---FNPH------PRT---------------IIQSSSPIFTLSPPSIQEKILEKMGFSAL 90
              F PH      PRT               +   +  I   +P   QE +L     + +
Sbjct: 55  RLQFLPHEDFNRYPRTFEEDCRTLSTQNVKIVFAPNEKILFPTP---QEFLLALPPVADI 111

Query: 91  IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYGFH 150
           +  KF        A   ++   +  ++ +  +      FGK       I+++  ++    
Sbjct: 112 LEGKFRPGFFRGVATIVLKLFNI--IQPEFAV------FGKKDYQQLHIVREMVQQLNLP 163

Query: 151 TVFI--DELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
              I  + +R      +SS N    L +     A  L      I+ ++  G K  +TL
Sbjct: 164 VQIIASETVRAADGLALSSRN--QYLNEVQRTEACRLYQTLLRIKQEISSGNKNFQTL 219


>gi|332665465|ref|YP_004448253.1| rfaE bifunctional protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332334279|gb|AEE51380.1| rfaE bifunctional protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 164

 Score = 35.9 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 4   FHNIEINQSLPNHLKG---GVV-AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP 59
            H+ E  Q++    +     VV   G FD +H GH   L QA  +     + +       
Sbjct: 11  IHSWESAQAIVQQWQKQGETVVFTNGCFDLLHYGHLHYLAQARDLGQRLVLGL----NSA 66

Query: 60  RTIIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFT 96
            ++ +   P   ++    +   +  +    A++ ++  
Sbjct: 67  GSVCRLKGPHRPINDERTRSWQMASLAFIDAVVVFEED 104


>gi|283953777|ref|ZP_06371308.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794818|gb|EFC33556.1| ATP-sulfurylase family protein [Campylobacter jejuni subsp. jejuni
           414]
          Length = 386

 Score = 35.9 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 55/158 (34%), Gaps = 34/158 (21%)

Query: 28  DGIHLGHHLILEQAIKIANNSPITVL----SFNPHPRTIIQSSSPIFTLSPPSIQEKILE 83
           D +H  H  I    I  A+   + V+    SF+ +                  ++E  L+
Sbjct: 159 DPLHRAHERIFHWTIDKAD---LVVIFLVESFDTNGFEF-------------ELKEAYLK 202

Query: 84  K-----MGFSALIRYK---FTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR---FGKD 132
           K     +    +  +      +  A+ +    ++ ++ + L    ++ G          D
Sbjct: 203 KFIQNYLPPDRIFIFPLKNINIFHAHLNP--GLESIIAKNLGCTKLVVGQNHTGLGMFYD 260

Query: 133 RAGDRGILQKRGEKYGFHTVFIDE-LRNNKSQIVSSSN 169
               + IL    + YG   + + E +  ++ +++ S+ 
Sbjct: 261 DNQPKTILDDFSKDYGIEVIVLPEFVFCDQCRMIVSTR 298


>gi|228922524|ref|ZP_04085825.1| hypothetical protein bthur0011_35100 [Bacillus thuringiensis serovar
            huazhongensis BGSC 4BD1]
 gi|228837119|gb|EEM82459.1| hypothetical protein bthur0011_35100 [Bacillus thuringiensis serovar
            huazhongensis BGSC 4BD1]
          Length = 1414

 Score = 35.9 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 56/171 (32%), Gaps = 13/171 (7%)

Query: 110  KVLVEWLEVKTV------ITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQ 163
              +V+WL  K +      I G K    K+    + +     ++ G  T  I +       
Sbjct: 1080 DTMVKWLTAKGIDTNLIRINGDKITIDKNGVTVKMLDFLYEDERGMKTTVISKRNLISDH 1139

Query: 164  IVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGE-----KIGRTLGFPTANMQLSPD 218
              SS  I+  +            G  + +  +V+  +        + +     +M   P+
Sbjct: 1140 DFSS-AIKKDIGNSDYWGFDGGYGLPWKVNGNVVIEKNTALFNYEQMVNAARVDMYNYPE 1198

Query: 219  ILLKEGVYAIRFRTQDQTSYSGVANFGRNPTMVPNGPLLLESFIFDFSQEI 269
              +K G++     T        + N G+  T  P   +   ++  +   +I
Sbjct: 1199 TTVKNGIHPGNIYTLSAHFRCAMIN-GKRVTAKPQLHICYVTYRDNVHYDI 1248


>gi|113476601|ref|YP_722662.1| cytidyltransferase-like protein [Trichodesmium erythraeum IMS101]
 gi|110167649|gb|ABG52189.1| cytidyltransferase-related domain [Trichodesmium erythraeum IMS101]
          Length = 170

 Score = 35.9 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 33/148 (22%)

Query: 17  LKGGVVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIF 70
            +  V   G FD IH GH   L     +        NS  +V +  P      +   P+ 
Sbjct: 27  WRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIVGLNSDWSVQNLKPQ-----KEGYPMR 81

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            + P + + ++L  +     ++   F   TA           ++E L+    + G  +  
Sbjct: 82  PIIPQTQRAEVLAALKPVDGVVI--FNETTATK---------IIERLKPDIYVKGGDY-- 128

Query: 130 GKDRAGDRGILQKRG--EKYGFHTVFID 155
                     L +    + YG     I 
Sbjct: 129 ------SVETLPEAQKVKNYGGKVSIIQ 150


>gi|15610738|ref|NP_218119.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis H37Rv]
 gi|15843214|ref|NP_338251.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis CDC1551]
 gi|31794778|ref|NP_857271.1| pantoate--beta-alanine ligase [Mycobacterium bovis AF2122/97]
 gi|121639521|ref|YP_979745.1| pantoate--beta-alanine ligase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663466|ref|YP_001284989.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis H37Ra]
 gi|148824807|ref|YP_001289561.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis F11]
 gi|215405651|ref|ZP_03417832.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis 02_1987]
 gi|215413525|ref|ZP_03422197.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215424846|ref|ZP_03422765.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis T92]
 gi|215432576|ref|ZP_03430495.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis EAS054]
 gi|218755384|ref|ZP_03534180.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis GM 1503]
 gi|219559677|ref|ZP_03538753.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis T17]
 gi|224992018|ref|YP_002646707.1| pantoate--beta-alanine ligase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800642|ref|YP_003033643.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis KZN
           1435]
 gi|260184521|ref|ZP_05761995.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis CPHL_A]
 gi|260198644|ref|ZP_05766135.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis T46]
 gi|260202793|ref|ZP_05770284.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis K85]
 gi|289441031|ref|ZP_06430775.1| pantoate-beta-alanine ligase [Mycobacterium tuberculosis T46]
 gi|289445196|ref|ZP_06434940.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555864|ref|ZP_06445074.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis KZN
           605]
 gi|289571841|ref|ZP_06452068.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis T17]
 gi|289572256|ref|ZP_06452483.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis K85]
 gi|289747438|ref|ZP_06506816.1| pantothenate synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289748116|ref|ZP_06507494.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis T92]
 gi|289755729|ref|ZP_06515107.1| pantoate-beta-alanine ligase [Mycobacterium tuberculosis EAS054]
 gi|289763780|ref|ZP_06523158.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis GM
           1503]
 gi|294993720|ref|ZP_06799411.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis 210]
 gi|297636277|ref|ZP_06954057.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis KZN 4207]
 gi|297733271|ref|ZP_06962389.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis KZN R506]
 gi|298527080|ref|ZP_07014489.1| pantothenate synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777957|ref|ZP_07416294.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu001]
 gi|306778488|ref|ZP_07416825.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu002]
 gi|306786509|ref|ZP_07424831.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu003]
 gi|306790875|ref|ZP_07429197.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu004]
 gi|306791198|ref|ZP_07429500.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu005]
 gi|306795983|ref|ZP_07434285.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu006]
 gi|306801229|ref|ZP_07437897.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu008]
 gi|306805443|ref|ZP_07442111.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu007]
 gi|306969734|ref|ZP_07482395.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu009]
 gi|307081783|ref|ZP_07490953.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu011]
 gi|307086399|ref|ZP_07495512.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu012]
 gi|313660601|ref|ZP_07817481.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis KZN
           V2475]
 gi|61229569|sp|P0A5R0|PANC_MYCTU RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|61229570|sp|P0A5R1|PANC_MYCBO RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|158706023|sp|A1KPT7|PANC_MYCBP RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|158706027|sp|A5U8S7|PANC_MYCTA RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|2113974|emb|CAB08942.1| PROBABLE PANTOATE--BETA-ALANINE LIGASE PANC (PANTOTHENATE
           SYNTHETASE) (PANTOATE ACTIVATING ENZYME) [Mycobacterium
           tuberculosis H37Rv]
 gi|13883568|gb|AAK48065.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis CDC1551]
 gi|31620375|emb|CAD95818.1| PROBABLE PANTOATE--BETA-ALANINE LIGASE PANC (PANTOTHENATE
           SYNTHETASE) (PANTOATE ACTIVATING ENZYME) [Mycobacterium
           bovis AF2122/97]
 gi|121495169|emb|CAL73655.1| Probable pantoate--beta-alanine ligase panC [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148507618|gb|ABQ75427.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis H37Ra]
 gi|148723334|gb|ABR07959.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis F11]
 gi|224775133|dbj|BAH27939.1| pantoate--beta-alanine ligase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253322145|gb|ACT26748.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis KZN
           1435]
 gi|289413950|gb|EFD11190.1| pantoate-beta-alanine ligase [Mycobacterium tuberculosis T46]
 gi|289418154|gb|EFD15355.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440496|gb|EFD22989.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis KZN
           605]
 gi|289536687|gb|EFD41265.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis K85]
 gi|289545595|gb|EFD49243.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis T17]
 gi|289687966|gb|EFD55454.1| pantothenate synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289688703|gb|EFD56132.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis T92]
 gi|289696316|gb|EFD63745.1| pantoate-beta-alanine ligase [Mycobacterium tuberculosis EAS054]
 gi|289711286|gb|EFD75302.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis GM
           1503]
 gi|298496874|gb|EFI32168.1| pantothenate synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308213729|gb|EFO73128.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu001]
 gi|308328482|gb|EFP17333.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu002]
 gi|308328896|gb|EFP17747.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu003]
 gi|308332734|gb|EFP21585.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu004]
 gi|308340227|gb|EFP29078.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu005]
 gi|308343549|gb|EFP32400.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu006]
 gi|308348016|gb|EFP36867.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu007]
 gi|308351957|gb|EFP40808.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu008]
 gi|308352743|gb|EFP41594.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu009]
 gi|308360549|gb|EFP49400.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu011]
 gi|308364165|gb|EFP53016.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu012]
 gi|323717710|gb|EGB26910.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905440|gb|EGE52373.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           W-148]
 gi|328460373|gb|AEB05796.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis KZN
           4207]
          Length = 309

 Score = 35.9 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 44/161 (27%), Gaps = 29/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++     + V+S   +P               P      L   G   
Sbjct: 43  LHEGHLALVRAAKRVP--GSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVE- 99

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TVITGTKFR 128
                FT  TA    +     V    L  +                      ++   +  
Sbjct: 100 ---IAFTPTTAAMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVF 156

Query: 129 FGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
           FG+       ++++    +      V +  +R      +SS
Sbjct: 157 FGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSS 197


>gi|182413991|ref|YP_001819057.1| transcriptional regulatory protein NadR [Opitutus terrae PB90-1]
 gi|177841205|gb|ACB75457.1| putative transcriptional regulatory protein NadR (probably
          AsnC-family) [Opitutus terrae PB90-1]
          Length = 337

 Score = 35.9 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF--NPHPRTI 62
          G  V IG F   H GH L++E AI  +    + V     +P P  +
Sbjct: 4  GTGVVIGKFLPPHRGHRLLIETAIGASEQVTVIVCGKPSDPIPAEL 49


>gi|123418667|ref|XP_001305381.1| cytidyltransferase-related domain containing protein [Trichomonas
           vaginalis G3]
 gi|121886896|gb|EAX92451.1| cytidyltransferase-related domain containing protein [Trichomonas
           vaginalis G3]
          Length = 341

 Score = 35.9 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 9/95 (9%)

Query: 1   MHVFHNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPH 58
           M   H I    S     K    V   G FD +H GH   L++A  +     + V   +P 
Sbjct: 168 MPTTHRISQFASHREPTKNDKIVYVDGTFDLLHPGHVSFLKKAKALGTYLVVGV---HPD 224

Query: 59  PRTIIQSSSPIFTLSPPSIQ-EKILEKMGFSALIR 92
           P   +   +    +     +   +L       +I 
Sbjct: 225 P---LPGENRPAPIMTLQERVLNVLAVKYVDDVII 256


>gi|332800211|ref|YP_004461710.1| citrate lyase ligase [Tepidanaerobacter sp. Re1]
 gi|332697946|gb|AEE92403.1| citrate lyase ligase [Tepidanaerobacter sp. Re1]
          Length = 343

 Score = 35.9 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 22/168 (13%)

Query: 32  LGHHLILEQAIKIAN-------NSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           LGH  ++E A   ++          ++V  F+   + +I+ +  +     P+++     +
Sbjct: 154 LGHLYLIETASAQSDKVFVLLVQEDLSVFPFDVRYKLVIEGTKHL-----PNVKVIPGGR 208

Query: 85  MGFSAL-IRYKFTLET------ANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDR 137
              S L     FT +T      +    E F++ + V  L +K    GT+  F        
Sbjct: 209 YVISYLTFPSYFTKDTKLAYAQSAIDVEIFLKHI-VPTLTIKRRYIGTE-PFSPVTEICN 266

Query: 138 GILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHL 185
             +++R    G   V +  L       VS+S++R  L++G++     L
Sbjct: 267 KTIKERLIPAGIEVVEVPRL-EKGGSAVSASHVRQLLSQGNITTVKEL 313


>gi|312194069|ref|YP_004014130.1| pantoate/beta-alanine ligase [Frankia sp. EuI1c]
 gi|311225405|gb|ADP78260.1| pantoate/beta-alanine ligase [Frankia sp. EuI1c]
          Length = 320

 Score = 35.9 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 14  PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLS 73
           P   +  V+ +G    +H GH  ++ +A + A+     V++   +P     +        
Sbjct: 53  PAGTRAVVMTMG---ALHDGHAALIREARRRADQ---VVVTIYVNPLQFGPTEDLDRYPR 106

Query: 74  PPSIQEKILEKMGFSALI 91
                 ++  + G   + 
Sbjct: 107 SFDADLEVCAREGADVVF 124


>gi|269836730|ref|YP_003318958.1| pantoate/beta-alanine ligase [Sphaerobacter thermophilus DSM
          20745]
 gi|269785993|gb|ACZ38136.1| pantoate/beta-alanine ligase [Sphaerobacter thermophilus DSM
          20745]
          Length = 280

 Score = 35.9 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 9/97 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGG---VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M V   +   +S    L G    V  +G    +H GH  ++ +A    ++    V+S   
Sbjct: 1  MRVIETVAALRSWRRALPGTLGLVPTMGY---LHEGHLALVRRARAENDH---VVVSIFV 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYK 94
          +P                     +L   G  A+    
Sbjct: 55 NPTQFGPGEDFAAYPRDTERDLALLRGEGVDAVFLPP 91


>gi|261344801|ref|ZP_05972445.1| hypothetical protein PROVRUST_06068 [Providencia rustigianii DSM
           4541]
 gi|282567248|gb|EFB72783.1| D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate
           adenosyltransferase [Providencia rustigianii DSM 4541]
          Length = 475

 Score = 35.9 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 27/162 (16%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V+  G FD +H GH   L  A K+ +   + V S +   R  ++  +     +P   
Sbjct: 340 ERVVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNS-DASTRR-LKGETRPV--NPLDQ 395

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGD 136
           +  +L  +G    ++   F  +    + ++ I ++L + L     + G  ++   + AG 
Sbjct: 396 RMIVLGALGAVDWVV--PFEED----TPQRLISEILPDIL-----VKGGDYQ-PDEIAGS 443

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGH 178
           + +        G   + +     N    +S++NI   + K  
Sbjct: 444 KEVWAA-----GGEVMVL-----NFEDGISTTNIIKNIMKTK 475


>gi|326402533|ref|YP_004282614.1| D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate
           adenosyltransferase [Acidiphilium multivorum AIU301]
 gi|325049394|dbj|BAJ79732.1| D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate
           adenosyltransferase [Acidiphilium multivorum AIU301]
          Length = 486

 Score = 35.9 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 30/112 (26%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------SPPSI 77
           G FD +H GH  +LEQA    +   +            + + S +  L        P + 
Sbjct: 360 GCFDLLHPGHVHLLEQARAGCDRLVVG-----------LNADSSVRRLKGASRPVQPEAA 408

Query: 78  QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  +L  +     ++ ++        SA           +    ++ G  + 
Sbjct: 409 RAAVLASLASVDLVVIFEEDTPLDLLSA-----------IRPDVLVKGADYT 449


>gi|313676144|ref|YP_004054140.1| rfae bifunctional protein [Marivirga tractuosa DSM 4126]
 gi|312942842|gb|ADR22032.1| rfaE bifunctional protein [Marivirga tractuosa DSM 4126]
          Length = 156

 Score = 35.9 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 64/176 (36%), Gaps = 29/176 (16%)

Query: 4   FHNIEINQSLPNHLK--GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRT 61
            +++E         K    V   G FD +HLGH   LE+A    +   + + +      +
Sbjct: 7   IYSLEALIKKRQDWKDQKVVFTNGCFDILHLGHVDYLEKAGTKGDKLIVALNTD----AS 62

Query: 62  IIQSSSPIFTLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKT 120
           + +   P   ++    + +I+  +    A++        +  +    I++++ +      
Sbjct: 63  VSKLKGPTRPVNNQEARARIIAALSFVDAVVF------FSEQTPISLIKQLIPD-----V 111

Query: 121 VITGTKFRFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           ++ G+ ++       D  +        G     I+ +     +  S++NI   + +
Sbjct: 112 LVKGSDYKISNIVGADVVM------GNGGKVETIELV-----EGYSTTNIINKINQ 156


>gi|148259371|ref|YP_001233498.1| rfaE bifunctional protein [Acidiphilium cryptum JF-5]
 gi|172047760|sp|A5FVE7|HLDE_ACICJ RecName: Full=Bifunctional protein hldE; Includes: RecName:
           Full=D-beta-D-heptose 7-phosphate kinase; AltName:
           Full=D-beta-D-heptose 7-phosphotransferase; Includes:
           RecName: Full=D-beta-D-heptose 1-phosphate
           adenosyltransferase
 gi|146401052|gb|ABQ29579.1| D-beta-D-heptose 1-phosphate adenylyltransferase /
           D-alpha,beta-D-heptose 7-phosphate 1-kinase
           [Acidiphilium cryptum JF-5]
          Length = 486

 Score = 35.9 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 30/112 (26%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTL-------SPPSI 77
           G FD +H GH  +LEQA    +   +            + + S +  L        P + 
Sbjct: 360 GCFDLLHPGHVHLLEQARAGCDRLVVG-----------LNADSSVRRLKGATRPVQPEAA 408

Query: 78  QEKILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +  +L  +     ++ ++        SA           +    ++ G  + 
Sbjct: 409 RAAVLASLASVDLVVIFEEDTPLDLLSA-----------IRPDVLVKGADYT 449


>gi|308379553|ref|ZP_07486736.2| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu010]
 gi|308356592|gb|EFP45443.1| pantoate-beta-alanine ligase panC [Mycobacterium tuberculosis
           SUMu010]
          Length = 301

 Score = 35.9 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 44/161 (27%), Gaps = 29/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++     + V+S   +P               P      L   G   
Sbjct: 35  LHEGHLALVRAAKRVP--GSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVE- 91

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TVITGTKFR 128
                FT  TA    +     V    L  +                      ++   +  
Sbjct: 92  ---IAFTPTTAAMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVF 148

Query: 129 FGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
           FG+       ++++    +      V +  +R      +SS
Sbjct: 149 FGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSS 189


>gi|332363978|gb|EGJ41757.1| pantetheine-phosphate adenylyltransferase [Streptococcus sanguinis
           SK355]
          Length = 164

 Score = 35.9 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 21/151 (13%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD +  GH  ++E+A ++ +   + +                 F       +      
Sbjct: 10  GSFDPMTTGHVDLIERASRLFDKLYVGI---------FYNREKSGFFTIEARERMVKEAL 60

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRG 144
                +            +++  +   +   L  K  + G +     D   +        
Sbjct: 61  QHLDNVEVI---------TSQNELAVTVARRLGAKAFVRGLRNSQDLDYEANMNF---FN 108

Query: 145 EKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
           ++       I  L     Q +SSS IR  + 
Sbjct: 109 QELAGELETIFLLSKPVYQHISSSRIRELIA 139


>gi|317131074|ref|YP_004090388.1| pantoate/beta-alanine ligase [Ethanoligenens harbinense YUAN-3]
 gi|315469053|gb|ADU25657.1| pantoate/beta-alanine ligase [Ethanoligenens harbinense YUAN-3]
          Length = 291

 Score = 35.9 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 55/205 (26%), Gaps = 36/205 (17%)

Query: 15  NHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSP 74
           N   G V  +G    +H GH  ++ +A +  +   ++V     +P               
Sbjct: 21  NETLGFVPTLGC---LHEGHLSLIRKAKEQNDLVAVSVFV---NPTQFGPGEDYEAYPRD 74

Query: 75  PSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW------------LEVKTV- 121
                ++  + G   +    F              +V V+             +  K V 
Sbjct: 75  IERDHRLATEAGADVV----FHPAAEEIYPRGASTEVEVKGPLTQKLCGASRPIHFKGVA 130

Query: 122 --------ITG-TKFRFGKDRAGDRGILQKRGEKYGFHT--VFIDELRNNKSQIVSSSNI 170
                   I G  +  FG+  A    +L+K           V    +R       SS N 
Sbjct: 131 TVVSILFHIIGPDRAYFGQKDAQQVAVLKKMVRDLHIPVELVVCPIVREADGLAKSSRN- 189

Query: 171 RTALTKGHVLNAAHLLGYRFTIESD 195
              L+      AA L          
Sbjct: 190 -RYLSPAERQQAAALYRGLQQARGY 213


>gi|167968202|ref|ZP_02550479.1| pantoate--beta-alanine ligase [Mycobacterium tuberculosis H37Ra]
          Length = 309

 Score = 35.9 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 44/161 (27%), Gaps = 29/161 (18%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSA 89
           +H GH  ++  A ++     + V+S   +P               P      L   G   
Sbjct: 43  LHEGHLALVRAAKRVP--GSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVE- 99

Query: 90  LIRYKFTLETANYSAEQFIQKVLVEWLEVK---------------------TVITGTKFR 128
                FT  TA    +     V    L  +                      ++   +  
Sbjct: 100 ---IAFTPTTAAMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVF 156

Query: 129 FGKDRAGDRGILQKRGEKYGFH--TVFIDELRNNKSQIVSS 167
           FG+       ++++    +      V +  +R      +SS
Sbjct: 157 FGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSS 197


>gi|227529049|ref|ZP_03959098.1| phosphopantetheine adenylyltransferase [Lactobacillus vaginalis
           ATCC 49540]
 gi|227351061|gb|EEJ41352.1| phosphopantetheine adenylyltransferase [Lactobacillus vaginalis
           ATCC 49540]
          Length = 173

 Score = 35.9 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 26/150 (17%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD + LGH  ++++   + +   + V++           S     L     +   + +
Sbjct: 8   GTFDPLTLGHLDLIKRGSALFDQLAVAVMT---------NRSKKP--LFTVEERVAQIRE 56

Query: 85  M--GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
              G   +            +    + ++  ++L ++ +   T F++ +D A     L  
Sbjct: 57  AVSGLDNVSVITTD----GLT-VDLMNRIGADYL-MRGLRNTTDFQYERDIAAMNNFLDD 110

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
           + E   F       L   + Q +SSS ++ 
Sbjct: 111 QCETVFF-------LAKPEYQHLSSSILKE 133


>gi|223938674|ref|ZP_03630564.1| pantoate/beta-alanine ligase [bacterium Ellin514]
 gi|223892662|gb|EEF59133.1| pantoate/beta-alanine ligase [bacterium Ellin514]
          Length = 285

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 19 GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
          G V  +G    +H GH  ++++A +I     + V+S   +P     +             
Sbjct: 23 GFVPTMGY---LHAGHLSLVKRARQIVGKQGVVVVSIYVNPTQFAPTEDLSRYPRDLDGD 79

Query: 79 EKILEKMGFSALIR 92
          +K+  + G   +  
Sbjct: 80 KKLCREAGVDIIFV 93


>gi|218133513|ref|ZP_03462317.1| hypothetical protein BACPEC_01380 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990888|gb|EEC56894.1| hypothetical protein BACPEC_01380 [Bacteroides pectinophilus ATCC
           43243]
          Length = 433

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 20/127 (15%)

Query: 30  IHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG-FS 88
           +H GH  ++++A        I VLS +     +I        L     + K+ E  G  +
Sbjct: 13  LHYGHIELMKKA-AAMGELIIGVLSDD-----VIACYKKPP-LVSFENRCKLFEDFGFVT 65

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
            +I+          S  + +++          ++ G  ++ G   +     L +  ++YG
Sbjct: 66  RVIKKD------ELSYRKILEEY-----HPDIIVHGDDWKTGPKASVRTE-LIELLKEYG 113

Query: 149 FHTVFID 155
              V   
Sbjct: 114 GELVEFP 120


>gi|306832088|ref|ZP_07465242.1| protein of hypothetical function (DUF795) superfamily protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304425527|gb|EFM28645.1| protein of hypothetical function (DUF795) superfamily protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 364

 Score = 35.9 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 24/130 (18%)

Query: 27  FDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMG 86
           F+  H GH  +L QA        I  +S        +Q   P   +     + ++  + G
Sbjct: 10  FNPFHNGHKYLLSQA----EGVKIVAMS-----GNFVQRGEPA--IVDKWTRAEMALRNG 58

Query: 87  FSALIRYKFTLETANYSAEQFIQKV--LVEWLEVKTVITGT----KFR-----FGKDRAG 135
              ++   F    A  SA+ F Q    ++E L V  +  GT     ++     +G ++  
Sbjct: 59  ADLVVELPF--LVAVQSADYFAQGAVDILERLGVDKLAFGTEENLDYQQFSQIYGDNQQK 116

Query: 136 DRGILQKRGE 145
               LQ   +
Sbjct: 117 MVDYLQSLPD 126


>gi|330900838|gb|EGH32257.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
           adenyltransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 196

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 27/165 (16%)

Query: 11  QSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIF 70
                H +  V   G FD +H GH   LEQA    +   + V        ++ +   P  
Sbjct: 54  DDARAHKERIVFTNGCFDILHAGHVTYLEQARARGDRLIVAV----NDDASVSRLKGPGR 109

Query: 71  TLSPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRF 129
            ++    +  +L  +G    +I +         + E  +  V     +   ++ G  +  
Sbjct: 110 PINSVERRMAVLAGLGAVDWVISFP------EGTPENLLTHV-----KPDVLVKGGDY-- 156

Query: 130 GKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           G D+     I+Q     YG     +  + N+     S++ I   +
Sbjct: 157 GVDQVVGADIVQA----YGGEVRVLGLVENS-----STTAIVEKI 192


>gi|108759713|ref|YP_632871.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Myxococcus
           xanthus DK 1622]
 gi|108463593|gb|ABF88778.1| D-beta-D-heptose 1-phosphate adenosyltransferase [Myxococcus
           xanthus DK 1622]
          Length = 162

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            +A G FD +H+GH   LE A  +A+   + V S +   R       P     P   + +
Sbjct: 28  ALANGVFDLLHVGHVRYLEGARALADVLVVAVNS-DASTRAYKGPGRPYI---PEGERAE 83

Query: 81  ILEKMGF-SALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           ++  +     +I   F              +V++  L+    + GT + 
Sbjct: 84  LVAALACTDRVIV--FDESN---------VRVIIRALKPDVHVKGTDYT 121


>gi|329902627|ref|ZP_08273186.1| ADP-heptose synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548685|gb|EGF33330.1| ADP-heptose synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 162

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 2  HVFHNIEINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITV 52
           +    E+   + +  +  V+  G FD +H GH   L QA  +  +  + V
Sbjct: 7  KICRRTELASRIAHLPQPVVMTNGVFDILHRGHVTYLAQARALGASLVVAV 57


>gi|302342706|ref|YP_003807235.1| rfaE bifunctional protein [Desulfarculus baarsii DSM 2075]
 gi|301639319|gb|ADK84641.1| rfaE bifunctional protein [Desulfarculus baarsii DSM 2075]
          Length = 176

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 5/114 (4%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH   L QA  +     + + S +   RT+ +       L P + + +
Sbjct: 33  VFTNGCFDLLHAGHVRYLNQARALGQMLVLGLNS-DESVRTLGKGDERP--LVPQAQRAE 89

Query: 81  ILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDR 133
           ++  +    A++ +      A          ++         I G +F   +  
Sbjct: 90  VVAALQAVDAVVVFD-DPTPAALIEIIAPDILVKGGDWPVDKIVGAEFVLAQGG 142


>gi|171909588|ref|ZP_02925058.1| ATPase/kinase involved in NAD metabolism-like protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 347

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 33/167 (19%)

Query: 22  VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKI 81
           + +G F  +H GH  ++ +A++   N  + VLS+            P F    P  +   
Sbjct: 10  LVVGKFCPLHKGHEAVIRRALEECEN--VVVLSYT----------VPEFPGCEPEKRAAW 57

Query: 82  LEK---------MGFSAL--IRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFG 130
           L           +G      +      +       +F+ +V  E L            F 
Sbjct: 58  LGSLFPETTRIVLGADHPWGLVPPPNDDPDESRHRRFVGQVCREVLRTTV-----DAVFT 112

Query: 131 KDRAGD--RGILQKRGEKY---GFHTVFIDELRNNKSQIVSSSNIRT 172
            +  GD     L++   +Y       V +          VS + +R 
Sbjct: 113 SESYGDGFAAELKRYFREYDAGHREVVHVPVDPGRSVLPVSGTALRA 159


>gi|149236842|ref|XP_001524298.1| hypothetical protein LELG_04269 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451833|gb|EDK46089.1| hypothetical protein LELG_04269 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 514

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 4   FHNIEINQSLPNHLKG-GVVAIGNFDGIHLGHHLILEQAIKIANNSPIT 51
           F       ++P   K   + A G FD  HLGH   LEQA K   N  + 
Sbjct: 135 FRPRGFRFNIPPKDKPIRIYADGVFDLFHLGHMKQLEQAKKSFENVELV 183


>gi|312142837|ref|YP_003994283.1| cytidyltransferase-related domain protein [Halanaerobium sp.
          'sapolanicus']
 gi|311903488|gb|ADQ13929.1| cytidyltransferase-related domain protein [Halanaerobium sp.
          'sapolanicus']
          Length = 159

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
          V   G FD +H+GH   L++A  + +   + V S +   + I   + P     P   + +
Sbjct: 26 VFTNGCFDILHVGHIRYLKKAASLGDKLVLAVNS-DSSVKEIKSKNRPFV---PEEERME 81

Query: 81 ILEKMG-FSALIRY 93
          IL  +     LI +
Sbjct: 82 ILAALEMIDYLILF 95


>gi|261839329|gb|ACX99094.1| ADP-heptose synthase [Helicobacter pylori 52]
          Length = 463

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 30/128 (23%)

Query: 8   EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSS 67
           ++ ++L +H +  V   G FD +H GH   L++A  + +   +            + S +
Sbjct: 320 KLLEALEHHQQKIVFTNGCFDILHKGHASYLQKAKALGDILIVG-----------LNSDA 368

Query: 68  PIFTL-------SPPSIQEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK 119
            I  L            +  +L  +     ++ ++                 L++ L+  
Sbjct: 369 SIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFEEDTPIK-----------LIQALKPD 417

Query: 120 TVITGTKF 127
            ++ G  +
Sbjct: 418 ILVKGADY 425


>gi|257462977|ref|ZP_05627381.1| nicotinamide-nucleotide adenylyltransferase [Fusobacterium sp.
          D12]
 gi|317060594|ref|ZP_07925079.1| nicotinate-nucleotide adenylyltransferase [Fusobacterium sp. D12]
 gi|313686270|gb|EFS23105.1| nicotinate-nucleotide adenylyltransferase [Fusobacterium sp. D12]
          Length = 193

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 25 GNFDGIHLGHHLILEQAIKIANNSPITVL 53
          G+F+ IHLGH  I+E  ++      I V+
Sbjct: 8  GSFNPIHLGHQKIIEFVLETMKLDKILVI 36


>gi|239827469|ref|YP_002950093.1| pantoate--beta-alanine ligase [Geobacillus sp. WCH70]
 gi|259515850|sp|C5D3B2|PANC_GEOSW RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|239807762|gb|ACS24827.1| pantoate/beta-alanine ligase [Geobacillus sp. WCH70]
          Length = 282

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 35/211 (16%)

Query: 19  GGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQ 78
           G V  +G    +H GH  +L++A +  +   ++V     +P     +             
Sbjct: 25  GFVPTMGY---LHEGHIALLKKAREENDIVALSVFV---NPLQFGPNEDFARYPRDIERD 78

Query: 79  EKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW---------------------LE 117
           E+I ++ G        F              +V V+                       +
Sbjct: 79  ERIAKENGVDVF----FCPSVEEMYPHPLSVQVTVKERVDVLCGKSRPGHFDGVATVLTK 134

Query: 118 VKTVITGTKFRFGKDRAGDRGILQKRGEKYGF--HTVFIDELRNNKSQIVSSSNIRTALT 175
           +  ++  T+  FG   A    ++      + F    V +  +R       SS N+   L+
Sbjct: 135 LFHIVMPTRAYFGMKDAQQVAVVDGLIRDFHFPIELVAVPTVREEDGLAKSSRNV--YLS 192

Query: 176 KGHVLNAAHLLGYRFTIESDVIHGEKIGRTL 206
                 A  L       ++ + +GE+   T+
Sbjct: 193 PEERKEAPALYQALQQAKTAIENGERNPETI 223


>gi|82775531|ref|YP_401878.1| pantoate--beta-alanine ligase [Shigella dysenteriae Sd197]
 gi|309787198|ref|ZP_07681810.1| pantoate--beta-alanine ligase [Shigella dysenteriae 1617]
 gi|123563497|sp|Q32JW8|PANC_SHIDS RecName: Full=Pantothenate synthetase; Short=PS; AltName:
           Full=Pantoate--beta-alanine ligase; AltName:
           Full=Pantoate-activating enzyme
 gi|81239679|gb|ABB60389.1| pantothenate synthetase [Shigella dysenteriae Sd197]
 gi|308924776|gb|EFP70271.1| pantoate--beta-alanine ligase [Shigella dysenteriae 1617]
          Length = 283

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)

Query: 23  AIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKIL 82
            +GN   +H GH  ++++A   A+   + V+S   +P    +               + L
Sbjct: 29  TMGN---LHDGHMKLVDEAKARAD---VVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKL 82

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQK 142
            K     +    F                 V+   + T++ G   R G  R      +  
Sbjct: 83  NKRKVDLV----FAPSVKEIYPNGTETHTYVDVPGLSTMLEGA-SRPGHFR--GVSTIVS 135

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKGHVLNAAHLLGYRFTIESDVIHGEKI 202
           +     F+ V  D     +      + IR  +           +G+   I    I   K 
Sbjct: 136 KL----FNLVQPDIACFGEKDFQQLALIRKMVAD---------MGFDIEIVGVPIMRAKD 182

Query: 203 GRTL----GFPTANMQLSPDILLKEGVYAIRFRTQD 234
           G  L    G+ TA         +  G+Y +     D
Sbjct: 183 GLALSSRNGYLTA-----EQCQIAPGLYKVLSSIAD 213


>gi|187734922|ref|YP_001877034.1| rfaE bifunctional protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187424974|gb|ACD04253.1| rfaE bifunctional protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 496

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G FD +HLGH     +A +  +   + + + +   + +     P   ++   ++  +L  
Sbjct: 368 GCFDLLHLGHLHSFMKAREACDVLFVGLNT-DASIKRLKGEDRP---INNEEMRSLLLAS 423

Query: 85  MGFSALIRYKFTLETA 100
           + F       F  +TA
Sbjct: 424 LDF-VDYVVPFDEDTA 438


>gi|254498657|ref|ZP_05111375.1| pantoate-beta-alanine ligase [Legionella drancourtii LLAP12]
 gi|254352105|gb|EET10922.1| pantoate-beta-alanine ligase [Legionella drancourtii LLAP12]
          Length = 253

 Score = 35.9 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 15/121 (12%)

Query: 1   MHVFHN----IEINQSL-PNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSF 55
           M VFH+    I   ++L P    G    +GN   +H GH  +    +     +  TV S 
Sbjct: 1   MQVFHDLNEWIRFRRNLSPELTIGFAPTMGN---LHAGHASLF---LASQKENNYTVSSL 54

Query: 56  NPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEW 115
             +P    Q+              +++EK G    I             +Q+  +V    
Sbjct: 55  FVNPTQFNQADDFTHYPRSLDADLQLMEKTGVDFCI-LPHDK---AMYPDQYNYQVHEHQ 110

Query: 116 L 116
           L
Sbjct: 111 L 111


>gi|154174084|ref|YP_001407671.1| putative nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter curvus 525.92]
 gi|112803616|gb|EAU00960.1| putative nicotinate (nicotinamide) nucleotide adenylyltransferase
           [Campylobacter curvus 525.92]
          Length = 291

 Score = 35.9 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD  HLGH  I++ A+   +   + ++       T I      F+ +PP ++ K + +
Sbjct: 8   GSFDPPHLGHDSIVKMALDSLDIDKLIIM------PTYISPFKSEFS-APPELRLKWIRR 60

Query: 85  -MGFSALIRYKFTLETANYSA----EQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI 139
             G    +      E A        E       +  +    +I G       ++  D   
Sbjct: 61  IWGHLQKVEIS-DYEIALTRPVPTIETVEHLYEIYDINSLYLIIGADHLATLNKWHDFKR 119

Query: 140 LQKRGE----KYGFHTVFIDELRNNKSQIVSSSNIR 171
           L    +    +     +  +  + + +  +SSS IR
Sbjct: 120 LCSLVKFVIAERNHILIPENLQKMDVNVNISSSQIR 155


>gi|320534565|ref|ZP_08035014.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320133186|gb|EFW25685.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 130

 Score = 35.5 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 32/155 (20%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L +A  + +   +  LS +                S    +  
Sbjct: 4   VITYGTYDLLHYGHIALLRRARALGDFL-VVALSSD----EFNAGKGKQAYFSYEERKVM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGI- 139
           +        ++           +  Q  +   V    +   + G  +      +G+    
Sbjct: 59  LEAIRYVDLVVP--------ELTWGQKTED--VARYGIDVFVMGNDW------SGEFDDQ 102

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           L+          V++      ++  VS++ I++ +
Sbjct: 103 LEGLC-----EVVYLP-----RTPEVSTTRIKSDM 127


>gi|227824536|ref|ZP_03989368.1| pantetheine-phosphate adenylyltransferase [Acidaminococcus sp. D21]
 gi|226905035|gb|EEH90953.1| pantetheine-phosphate adenylyltransferase [Acidaminococcus sp. D21]
          Length = 162

 Score = 35.5 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 29/158 (18%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD + LGH  I E+A  +          F+    ++  + +    L P   +  
Sbjct: 4   AVCPGSFDPVTLGHLDIFERASHM----------FDEVIISVFVNPTKDKALFPMEERVA 53

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRAGD 136
           ++EK   + L   + T   +    E           E   ++ G    + F +   RA  
Sbjct: 54  LIEKA-TAHLPNVRVT-SFSGLLNE------FCRKEEAAFIVRGLRAFSDFEYEFQRA-- 103

Query: 137 RGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
              L  +   +   TVFI  + + +   +SSS +R  L
Sbjct: 104 ---LLMKKIDHSIETVFI--MTDERYSCLSSSGVREML 136


>gi|218692778|ref|YP_002400990.1| nicotinamide-nucleotide adenylyltransferase [Escherichia coli ED1a]
 gi|218430342|emb|CAR11212.1| bifunctional DNA-binding transcriptional repressor and NMN
           adenylyltransferase [Escherichia coli ED1a]
          Length = 410

 Score = 35.5 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 12  SLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFT 71
             P   K   V  G F  +H GH  ++++A    +   I ++ F+      +   S +  
Sbjct: 58  EFPRQKKTSGVVFGKFYPLHTGHIYLIQRACSQVDELHI-IMGFDDTRDRALFEDSAMSQ 116

Query: 72  LSPPSIQEK-ILEKMGFSALIRYK-FTLETANYSAEQF--IQKVLVEWLEVKTVITGTKF 127
                 + + +L+   +   IR   F  E        +      + +++  K +      
Sbjct: 117 QPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQ--PDL 174

Query: 128 RFGKDRAGDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            +      +     +  E  G  TV +D  R      +S + IR 
Sbjct: 175 IY----TSEEADAPQYMEHLGIETVLVDPKRTF--MSISGAQIRE 213


>gi|254467935|ref|ZP_05081341.1| pantetheine-phosphate adenylyltransferase [beta proteobacterium
           KB13]
 gi|207086745|gb|EDZ64028.1| pantetheine-phosphate adenylyltransferase [beta proteobacterium
           KB13]
          Length = 158

 Score = 35.5 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 26/153 (16%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEK 84
           G+FD I  GH  I+ Q      N    V+         +   +   +L     +  +L++
Sbjct: 9   GSFDPITKGHEDIINQL----QNLASVVI-------VAVAKDNDKNSLYSIDQRLNLLKE 57

Query: 85  MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG--TKFRFGKDRAGDRGILQK 142
           +      +    +E  +YS    +   L +   V  +  G   +  F  +R      L  
Sbjct: 58  L-----YQNHANIEVISYSG---LTVDLAKKNNVSVIARGLRNEIDFAYER-----DLSD 104

Query: 143 RGEKYGFHTVFIDELRNNKSQIVSSSNIRTALT 175
             +K   +   I    +   + +SSS +R  + 
Sbjct: 105 MNQKIDENIRTIFFQSDPALRSISSSLVRQLIH 137


>gi|223937493|ref|ZP_03629397.1| cytidyltransferase-related domain protein [bacterium Ellin514]
 gi|223893844|gb|EEF60301.1| cytidyltransferase-related domain protein [bacterium Ellin514]
          Length = 142

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 17/81 (20%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIAN------NSPITVLSFNPHPRTIIQSSSPIFTLSP 74
          VV  G FD +HLGH   LE A  + +      N    V       R +   + P+   + 
Sbjct: 9  VVTNGCFDLLHLGHVTYLETARNLGDALLIGVNGDSAV-------RELKGPNRPV---NI 58

Query: 75 PSIQEKILEKMG-FSALIRYK 94
             +  +L  +     +  ++
Sbjct: 59 EGDRAAVLAALESVDGVCIFE 79


>gi|332995184|gb|AEF05239.1| putative glycerol-3-phosphate cytidyltransferase [Alteromonas sp.
           SN2]
          Length = 132

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G FD +H+GH  IL++A        + ++  +     + +       + P   +E+
Sbjct: 4   VITFGTFDVLHIGHIRILKRARA---EGDVLIVGLSSDELNLSKKGRNP--IYPYHSREE 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           +L  +     +   FT E+     +  IQ       +   ++ G  + 
Sbjct: 59  LLASL---RFVDKIFTEESLEKKRDYIIQH------KADVLVMGDDWY 97


>gi|317181296|dbj|BAJ59080.1| pantoate--beta-alanine ligase [Helicobacter pylori F57]
          Length = 276

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 9/95 (9%)

Query: 1  MHVFHNIEINQSLPNHLKGGV---VAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNP 57
          M +   I   +     LK  V     +G    +H GH  ++E+++K  +++ ++V     
Sbjct: 1  MRMLETIATLREYRKSLKESVGFVPTMG---ALHKGHQSLIERSLKENSHTIVSVFV--- 54

Query: 58 HPRTIIQSSSPIFTLSPPSIQEKILEKMGFSALIR 92
          +P     +        P      + E +G +A+  
Sbjct: 55 NPTQFGPNEDFNAYPRPLEKDLALCEGLGVNAVFL 89


>gi|308068611|ref|YP_003870216.1| nucleotidyltransferase [Paenibacillus polymyxa E681]
 gi|305857890|gb|ADM69678.1| Predicted nucleotidyltransferase [Paenibacillus polymyxa E681]
          Length = 411

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 30  IHLGH-HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEKILEKMGFS 88
           +H GH H   E          + V+S    P   +Q   P   ++    + ++   MG  
Sbjct: 13  LHNGHVHHWEESLRITGAQRTVAVMS---GP--FLQRGEPA--ITDKWSRTEMALAMGVD 65

Query: 89  ALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGILQKRGEKYG 148
            ++     +  A   AE F +   V  L    ++      FG + +GD   L+       
Sbjct: 66  LVLELP--VAYAVQPAEWFARG-AVALLHATGIV--DALCFGSE-SGDIVPLRALARVLA 119

Query: 149 FHTVFIDELRNNKSQIVSS 167
                  EL+   +Q +SS
Sbjct: 120 AEP---AELKAGIAQRLSS 135


>gi|255038298|ref|YP_003088919.1| rfaE bifunctional protein [Dyadobacter fermentans DSM 18053]
 gi|254951054|gb|ACT95754.1| rfaE bifunctional protein [Dyadobacter fermentans DSM 18053]
          Length = 162

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 8/119 (6%)

Query: 18  KGGVVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI 77
           +  V   G FD +HLGH   LE+A  + +   + + +      ++ +   P+  +     
Sbjct: 26  QKVVFTNGCFDIVHLGHIDYLEKARALGDKMVLGLNTD----ASVSRLKGPLRPVVNEYA 81

Query: 78  QEKILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVK-TVITGTKFRFGKDRA 134
           + +++  +    A+I   F   T +   E     +LV+  +     I G  F  G+   
Sbjct: 82  RARLMAALSFIDAVIL--FDEPTPSQLIEAVKPDILVKGDDYTIENIAGADFVLGRGGE 138


>gi|119960830|ref|YP_948199.1| phosphopantetheine adenylyltransferase [Arthrobacter aurescens TC1]
 gi|166216055|sp|A1R7I7|COAD_ARTAT RecName: Full=Phosphopantetheine adenylyltransferase; AltName:
           Full=Dephospho-CoA pyrophosphorylase; AltName:
           Full=Pantetheine-phosphate adenylyltransferase;
           Short=PPAT
 gi|119947689|gb|ABM06600.1| pantetheine-phosphate adenylyltransferase [Arthrobacter aurescens
           TC1]
          Length = 166

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 43/158 (27%), Gaps = 34/158 (21%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
            V  G+FD IH GH  ++ +A  + +   + V +           +           + +
Sbjct: 4   AVCPGSFDPIHNGHLEVIARAAGLFDEVIVAVST-----------NYAKKYRFSLEDRME 52

Query: 81  ILEK--MGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITG----TKFRFGKDRA 134
           +  +       +I            AE            V  ++ G    + F       
Sbjct: 53  MARETLASLRGIIVEPMGE---GLLAE------YCRHRGVSAIVKGLRSSSDF------- 96

Query: 135 GDRGILQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRT 172
            D  +      +       +          +SS+ I+ 
Sbjct: 97  -DYELPMATMNRQLTGVETVFLPAEAHYVHLSSTLIKE 133


>gi|74025808|ref|XP_829470.1| ethanolamine-phosphate cytidylyltransferase [Trypanosoma brucei]
 gi|70834856|gb|EAN80358.1| ethanolamine-phosphate cytidylyltransferase, putative [Trypanosoma
           brucei]
 gi|222350153|emb|CAX32459.1| CTP-phosphoethanolamine cytidyltransferase [Trypanosoma brucei
           brucei]
 gi|261335467|emb|CBH18461.1| ethanolamine-phosphate cytidylyltransferase,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 384

 Score = 35.5 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 21/126 (16%)

Query: 5   HNIEINQSLPNHLKGG--VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTI 62
           + +     LP    G   V   G FD +H GH   L QA  + +   +   +       I
Sbjct: 19  YPLYAPSPLPPKRPGTIRVWVDGCFDMLHFGHANALRQARSMGDELFVGCHTDE----EI 74

Query: 63  IQSSSPIFTLSPPSIQEKILEKMG-FSALIR-YKFTLETANYSAEQFIQKVLVEWLEVKT 120
           I+   P         + + L       A+I  Y +     +            +  EV  
Sbjct: 75  IRHKGPPS--MRQEERYEALRACKWVDAVIEGYPYVTRVEDM-----------KRFEVDF 121

Query: 121 VITGTK 126
           V+ G  
Sbjct: 122 VVHGDD 127


>gi|325267844|ref|ZP_08134494.1| bifunctional protein hldE (D-beta-D-heptose 7-phosphate
          kinase/D-beta-D-heptose 1-phosphate
          adenosyltransferase) [Kingella denitrificans ATCC
          33394]
 gi|324980725|gb|EGC16387.1| bifunctional protein hldE (D-beta-D-heptose 7-phosphate
          kinase/D-beta-D-heptose 1-phosphate
          adenosyltransferase) [Kingella denitrificans ATCC
          33394]
          Length = 161

 Score = 35.5 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 8  EINQSLPNHLKGGVVAIGNFDGIHLGHHLILEQAIKIAN 46
          ++ Q LP+  +  V   G FD IH GH   L QA  +  
Sbjct: 17 QLLQKLPDMPRPLVFTNGCFDIIHRGHVTYLAQARALGK 55


>gi|326773777|ref|ZP_08233060.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces viscosus
           C505]
 gi|326637007|gb|EGE37910.1| glycerol-3-phosphate cytidylyltransferase [Actinomyces viscosus
           C505]
          Length = 130

 Score = 35.5 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 50/154 (32%), Gaps = 30/154 (19%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+  G +D +H GH  +L++A  + +   +  LS +                S    +  
Sbjct: 4   VITYGTYDLLHYGHIALLKRARALGDFL-MVALSSD----EFNAGKGKQSYFSYEERKVM 58

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
           +        ++           +  Q  + +      +   + G  +    +   D   L
Sbjct: 59  LEAIRYVDLVVP--------ELTWGQKTEDIA--KYGIDVFVMGDDW----NGEFD-DQL 103

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTAL 174
           +          V++      ++  VS++ I++ +
Sbjct: 104 KGLC-----EVVYLP-----RTPEVSTTRIKSDM 127


>gi|296109517|ref|YP_003616466.1| cytidyltransferase-related domain protein [Methanocaldococcus
          infernus ME]
 gi|295434331|gb|ADG13502.1| cytidyltransferase-related domain protein [Methanocaldococcus
          infernus ME]
          Length = 148

 Score = 35.5 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 21 VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
          VV  G FD +H GH  +L+ A  +     I  ++ +               ++P SI+ K
Sbjct: 4  VVVGGTFDILHKGHKELLKFASSL--GKLIVGITSDE-----FAKKYKKHEINPLSIRLK 56

Query: 81 ILE 83
           L+
Sbjct: 57 NLK 59


>gi|154247697|ref|YP_001418655.1| rfaE bifunctional protein [Xanthobacter autotrophicus Py2]
 gi|154161782|gb|ABS68998.1| rfaE bifunctional protein [Xanthobacter autotrophicus Py2]
          Length = 482

 Score = 35.5 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V   G FD +H GH  ILE A +  +   + + + +   + +   + P+      + + +
Sbjct: 352 VFTNGCFDLVHPGHVAILEAAAREGDRLVVALNT-DASVQRLKGPTRPVQ---DEAARAR 407

Query: 81  ILEKM-GFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFR 128
           ++  +     ++ ++        +A           L    ++ G  +R
Sbjct: 408 VIGALRCVDLVVLFEEDTPLEIITA-----------LGPDVLVKGADYR 445


>gi|149920738|ref|ZP_01909202.1| phosphopantetheine adenylyltransferase [Plesiocystis pacifica
           SIR-1]
 gi|149818391|gb|EDM77842.1| phosphopantetheine adenylyltransferase [Plesiocystis pacifica
           SIR-1]
          Length = 176

 Score = 35.5 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 32/158 (20%)

Query: 25  GNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHP--RTIIQSSSPIFTLSPPSIQEKIL 82
           G+FD I LGH  ILE+A ++ +   + V     HP  R        +  +   +     +
Sbjct: 14  GSFDPITLGHTEILERAAQLFDEVVVAV---GHHPVKRGFFSYEQRVELIREVTAHIPNV 70

Query: 83  EKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRG---I 139
               FS L    F  E                 +  + ++ G         AGD      
Sbjct: 71  RAAHFSGL-MIDFCRE-----------------VGARVIVRG------LRAAGDFEPEFQ 106

Query: 140 LQKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTKG 177
           +     +       +  +   + Q +SSS IR   + G
Sbjct: 107 MALANRELEPKVETVFLIPEPQKQFISSSLIREIASHG 144


>gi|254779175|ref|YP_003057280.1| Bifunctional protein HldE [Helicobacter pylori B38]
 gi|254001086|emb|CAX29033.1| Bifunctional protein hldE [Includes: D-beta-D-heptose 7-phosphate
           kinase (D-beta-D-heptose 7-phosphotransferase);
           D-beta-D-heptose 1-phosphate adenosyltransferase ]
           [Helicobacter pylori B38]
          Length = 461

 Score = 35.5 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 18/109 (16%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITV-LSFNPHPRTIIQSSSPIFTLSPPSIQE 79
           V   G FD +H GH   L++A  +     + V L+ +   +  ++       +     + 
Sbjct: 331 VFTNGCFDLLHKGHASYLQKAKAL--GDILVVGLNSDNSVKR-LKGDKRP--IVSEKDRA 385

Query: 80  KILEKMG-FSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKF 127
            +L  +     ++ ++                 L++ L+   ++ G  +
Sbjct: 386 FLLASLSCVDYVVVFEEDTPIK-----------LIQALKPDILVKGADY 423


>gi|307944937|ref|ZP_07660274.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
 gi|307771861|gb|EFO31085.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
          Length = 336

 Score = 35.5 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 35  HLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSI-QEKILEKMGFS 88
             + E A  +     + V+ F PH    ++ +     L       E+ LE +   
Sbjct: 239 RALSEAARALRPGGRLLVIDFAPHTLEFLRDAHAHRRLGIARDHMERWLETLDLD 293


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.315    0.163    0.526 

Lambda     K      H
   0.267   0.0498    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,824,899,623
Number of Sequences: 14124377
Number of extensions: 329222801
Number of successful extensions: 858815
Number of sequences better than 10.0: 4637
Number of HSP's better than 10.0 without gapping: 5080
Number of HSP's successfully gapped in prelim test: 2058
Number of HSP's that attempted gapping in prelim test: 835486
Number of HSP's gapped (non-prelim): 7792
length of query: 324
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 185
effective length of database: 2,879,505,227
effective search space: 532708466995
effective search space used: 532708466995
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 82 (35.9 bits)