RPSBLAST alignment of GI: 254780846 and protein with PDBid: 3glv

>3glv_A Lipopolysaccharide core biosynthesis protein; structural genomics, PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1} Length = 143

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 23/156 (14%)

Query: 21  VVAIGNFDGIHLGHHLILEQAIKIANNSPITVLSFNPHPRTIIQSSSPIFTLSPPSIQEK 80
           V+A G FD +HLGH   L+++ K+ +   + V   +                    I ++
Sbjct: 5   VMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNG-----------KIPIFDE 53

Query: 81  ILEKMGFSALIRYKFTLETANYSAEQFIQKVLVEWLEVKTVITGTKFRFGKDRAGDRGIL 140
                  S L      +        + + +V  + + +           G D+  D   L
Sbjct: 54  NSRLALISELKVVDRAILGHEGDMMKTVIEVKPDIITL-----------GYDQKFDEAEL 102

Query: 141 QKRGEKYGFHTVFIDELRNNKSQIVSSSNIRTALTK 176
           Q +  K G     +   + +  Q+ SSS++R  + +
Sbjct: 103 QSKINKLGITVKIVRISKYDG-QLNSSSSVRKKIME 137