HHsearch alignment for GI: 254780847 and conserved domain: TIGR01533
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family; InterPro: IPR006423 This group of sequences represents a set of bacterial lipoproteins belonging to a larger acid phosphatase family, which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles..
Probab=98.29 E-value=2.1e-06 Score=62.26 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=59.6
Q ss_pred CCCEEEEECCCEEEE---------------------------CCCCCCCHHHHHHHHHHCCCCEEEECCCC--CCHHHHH
Q ss_conf 179999927443231---------------------------88148627999999998798199985989--9958999
Q gi|254780847|r 14 YYDVILCDVWGVLHN---------------------------GQKFLPGTIPALKEARENGLKVILFTNSP--RPSASVI 64 (282)
Q Consensus 14 ~yd~~lfD~DGvL~~---------------------------g~~~ipgA~e~l~~L~~~g~~~~~lTN~s--~~~~~~~ 64 (282)
T Consensus 99 kk~AivlDlDETvLDNsPY~gy~v~~~k~f~~E~W~~W~~~~~a~~vaGA~~Fl~ya~~kGv~iFYvsnR~~~~~~~aTl 178 (295)
T TIGR01533 99 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPEDWDKWVQAAQAKPVAGALEFLNYANSKGVKIFYVSNRSDEKEKEATL 178 (295)
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
T ss_conf 87437711532010376557999880789798755899863117775107889999987592589965687301244207
Q ss_pred HHHHHCCCCCHHCCCCC
Q ss_conf 98751277700001356
Q gi|254780847|r 65 SQIQSLGSSSQFWDDII 81 (282)
Q Consensus 65 ~~L~~lG~~~~~~d~I~ 81 (282)
T Consensus 179 ~nLk~~g~P~~~~~hll 195 (295)
T TIGR01533 179 ENLKKKGFPQADEEHLL 195 (295)
T ss_pred HHHHHCCCCCCCHHHEE
T ss_conf 99986387955501200