HHsearch alignment for GI: 254780847 and conserved domain: TIGR02108
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B; InterPro: IPR011842 This entry describes coenzyme PQQ biosynthesis protein B, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases. Note that this gene appears to be required for PQQ in biosynthesis in Methylobacterium extorquens (under the name pqqG) and in Klebsiella pneumoniae but that the equivalent pqqV in Acinetobacter calcoaceticus is not necessary for heterologous expression of PQQ biosynthesis in Escherichia coli. Based on this latter finding, it is suggested that PqqB might be a transporter or a PQQ-dependent enzyme rather than a PQQ biosynthesis enzyme .; GO: 0006810 transport, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=90.82 E-value=0.28 Score=28.65 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=34.1
Q ss_pred CEEEECCCC-CCHHHHHHH--HHH-CC-CCCHH-CCCCCCHHHH--HHHHH-HHHC-CCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 199985989-995899998--751-27-77000-0135687999--99999-8531-65454387252124311797315
Q gi|254780847|r 49 KVILFTNSP-RPSASVISQ--IQS-LG-SSSQF-WDDIITSGDL--THHLL-VEES-HNIFFIGPQRDYALLEKLNIKIV 118 (282)
Q Consensus 49 ~~~~lTN~s-~~~~~~~~~--L~~-lG-~~~~~-~d~I~ts~~~--~~~~l-~~~~-~~v~viG~~~~~~~l~~~g~~~~ 118 (282)
T Consensus 48 ~rW~L~NASPDiRQQi~a~paL~P~~~aLR~TpI~~V~Lt~g~iDH~tGLL~LREgq~pf~~yat~~Vlq~L~~-GNp~F 126 (314)
T TIGR02108 48 ERWVLLNASPDIRQQIQAFPALHPQRGALRDTPIEGVVLTDGEIDHVTGLLSLREGQQPFTLYATEMVLQDLSD-GNPIF 126 (314)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHC-CCCCC
T ss_conf 73586707964888886203215777888657604788206622456412333037885148627157888754-88602
Q ss_pred CCCCC
Q ss_conf 75567
Q gi|254780847|r 119 NEQHA 123 (282)
Q Consensus 119 ~~~~~ 123 (282)
T Consensus 127 ~~L~~ 131 (314)
T TIGR02108 127 NVLNH 131 (314)
T ss_pred CCCCC
T ss_conf 12252