HHsearch alignment for GI: 254780847 and conserved domain: TIGR02252

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase; InterPro: IPR011949 This family of proteins includes uncharacterised sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene . This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs . The subfamilies are defined based on the location and the observed or predicted fold of a so-called, capping domain, , or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this entry are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes..
Probab=99.05  E-value=2.8e-10  Score=87.71  Aligned_cols=104  Identities=21%  Similarity=0.292  Sum_probs=73.1

Q ss_pred             CCCHH-HHHHHHHHHHHCCC--CE-EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHH-H
Q ss_conf             01179-99999999973057--40-31266432256630011048999988750476-53234777025899999865-4
Q gi|254780847|r  136 KDKTE-DYRMLLERFAHRHI--PL-ICANPDIVANRGNKIIPCAGALALIYQQLNGI-VKMIGKPHLPIYEMAFKKIS-S  209 (282)
Q Consensus       136 ~~~~~-~~~~l~~~~~~~~~--~~-i~~N~D~~~p~~~~~~~~~G~~~~~~~~~~g~-~~~~GKP~~~~~~~a~~~l~-~  209 (282)
T Consensus       115 W~~~~~d~~~~L~~~r~~g~k~~lgviSNFD~RL~~---~L~~~GL~~~~fd~~~~S~e~g~eKPDp~IF~~Al~~~~~~  191 (224)
T TIGR02252       115 WQVYPPDAQKLLKDLREEGLKVKLGVISNFDSRLRG---VLEALGLFLEYFDFVVTSYEVGAEKPDPKIFQKALERAGKK  191 (224)
T ss_pred             CEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHH---HHHHCCCCHHHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             620375578999999972896589987465133789---99760824354404301466257898867899999998887


Q ss_pred             HHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             314889000899738857889999976996999
Q gi|254780847|r  210 LCNSFNKKRILAIGDGMDTDIKGALQSGIDALY  242 (282)
Q Consensus       210 ~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~sil  242 (282)
T Consensus       192 ~~~~~~p~~~~HiGD~~~~D~~gA~~~G~~~~L  224 (224)
T TIGR02252       192 LTKEISPEEALHIGDSLRNDYEGARAAGWRALL  224 (224)
T ss_pred             HHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCC
T ss_conf             503577233776268803333657873866569