HHsearch alignment for GI: 254780847 and conserved domain: TIGR02252
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase; InterPro: IPR011949 This family of proteins includes uncharacterised sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene . This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs . The subfamilies are defined based on the location and the observed or predicted fold of a so-called, capping domain, , or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this entry are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes..
Probab=99.05 E-value=2.8e-10 Score=87.71 Aligned_cols=104 Identities=21% Similarity=0.292 Sum_probs=73.1
Q ss_pred CCCHH-HHHHHHHHHHHCCC--CE-EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHH-H
Q ss_conf 01179-99999999973057--40-31266432256630011048999988750476-53234777025899999865-4
Q gi|254780847|r 136 KDKTE-DYRMLLERFAHRHI--PL-ICANPDIVANRGNKIIPCAGALALIYQQLNGI-VKMIGKPHLPIYEMAFKKIS-S 209 (282)
Q Consensus 136 ~~~~~-~~~~l~~~~~~~~~--~~-i~~N~D~~~p~~~~~~~~~G~~~~~~~~~~g~-~~~~GKP~~~~~~~a~~~l~-~ 209 (282)
T Consensus 115 W~~~~~d~~~~L~~~r~~g~k~~lgviSNFD~RL~~---~L~~~GL~~~~fd~~~~S~e~g~eKPDp~IF~~Al~~~~~~ 191 (224)
T TIGR02252 115 WQVYPPDAQKLLKDLREEGLKVKLGVISNFDSRLRG---VLEALGLFLEYFDFVVTSYEVGAEKPDPKIFQKALERAGKK 191 (224)
T ss_pred CEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHH---HHHHCCCCHHHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 620375578999999972896589987465133789---99760824354404301466257898867899999998887
Q ss_pred HHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf 314889000899738857889999976996999
Q gi|254780847|r 210 LCNSFNKKRILAIGDGMDTDIKGALQSGIDALY 242 (282)
Q Consensus 210 ~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~sil 242 (282)
T Consensus 192 ~~~~~~p~~~~HiGD~~~~D~~gA~~~G~~~~L 224 (224)
T TIGR02252 192 LTKEISPEEALHIGDSLRNDYEGARAAGWRALL 224 (224)
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCC
T ss_conf 503577233776268803333657873866569