HHsearch results for GI: 254780847 and protein with PDBid: 1vjr_A
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=100.00 E-value=1.7e-32 Score=232.05 Aligned_cols=252 Identities=20% Similarity=0.328 Sum_probs=191.3
Q ss_pred CCCHHHHHHCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHHCCCCCHHCCCCCCH
Q ss_conf 57579998417999992744323188148627999999998798199985989-99589999875127770000135687
Q gi|254780847|r 5 ITSLRTILPYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQSLGSSSQFWDDIITS 83 (282)
Q Consensus 5 l~~~~~i~~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~~lG~~~~~~d~I~ts 83 (282)
..+..+++++||+++||+|||||++.++||+|.++|++|++.|++++++||+| ++.+++.+++..++.... ..+++++
T Consensus 7 ~~~~~~~~~~iK~vlFDlDGTL~d~~~~i~~a~eai~~l~~~g~~~~~~t~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~ 85 (271)
T 1vjr_A 7 HHHHHHVLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP-DDAVVTS 85 (271)
T ss_dssp -----CGGGGCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC-GGGEEEH
T ss_pred CCHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC-HHHHHHH
T ss_conf 313899996799999978880078991775799999999976998899838998986999999875045543-7776537
Q ss_pred HHHHHHHHHHHC--CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
Q ss_conf 999999998531--654543872521243117973157556786899843771001179999999999730574031266
Q gi|254780847|r 84 GDLTHHLLVEES--HNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKDKTEDYRMLLERFAHRHIPLICANP 161 (282)
Q Consensus 84 ~~~~~~~l~~~~--~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~~~~~~~~l~~~~~~~~~~~i~~N~ 161 (282)
+.....+..... .+.+....+.+.......+..+.. .. ......+... ..........+. ........+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~ 160 (271)
T 1vjr_A 86 GEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDE-EN-PDFVVLGFDK--TLTYERLKKACI-LLRKGKFYIATHP 160 (271)
T ss_dssp HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCEECS-SS-CSEEEECCCT--TCCHHHHHHHHH-HHTTTCEEEESCC
T ss_pred HHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCH-HH-CHHEEECCCC--CCCHHHHHHHHH-HHHCCCCEEEECC
T ss_conf 88888876542146522432507888999972664441-10-0003632455--542277899999-8743760253247
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCC
Q ss_conf 432256630011048999988750476--532347770258999998654314889000899738857889999976996
Q gi|254780847|r 162 DIVANRGNKIIPCAGALALIYQQLNGI--VKMIGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGID 239 (282)
Q Consensus 162 D~~~p~~~~~~~~~G~~~~~~~~~~g~--~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~ 239 (282)
|..++...+...+.|.+...+....+. ....+||+|.+|+.+++++ ++++++++||||++.+||.||+++||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~-----~~~~~e~v~vGD~~~~DI~~a~~aGi~ 235 (271)
T 1vjr_A 161 DINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF-----GVPKERMAMVGDRLYTDVKLGKNAGIV 235 (271)
T ss_dssp CSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH-----TCCGGGEEEEESCHHHHHHHHHHHTCE
T ss_pred CCCCCCCCCEECCCCCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHH-----HHCCCCCEEECCCCHHHHHHHHHCCCC
T ss_conf 865642155101477520000111562000478899868999999862-----001113436558825789999987995
Q ss_pred EEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf 999718678777842048898899989986089884230421
Q gi|254780847|r 240 ALYVSDGIHRHEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL 281 (282)
Q Consensus 240 silV~tG~~~~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l 281 (282)
||||.+|.+++++.. +.+..|||++++|
T Consensus 236 tv~V~~G~~~~~~~~--------------~~~~~pD~vi~sl 263 (271)
T 1vjr_A 236 SILVLTGETTPEDLE--------------RAETKPDFVFKNL 263 (271)
T ss_dssp EEEESSSSCCHHHHH--------------HCSSCCSEEESSH
T ss_pred EEEECCCCCCHHHHH--------------HCCCCCCEEECCH
T ss_conf 999898999977886--------------2589998898999