HHsearch results for GI: 254780847 and protein with PDBid: 2ho4_A
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=100.00 E-value=2.2e-41 Score=290.29 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=188.6
Q ss_pred HCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHH
Q ss_conf 417999992744323188148627999999998798199985989-9958999987512777000013568799999999
Q gi|254780847|r 13 PYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQSLGSSSQFWDDIITSGDLTHHLL 91 (282)
Q Consensus 13 ~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~~lG~~~~~~d~I~ts~~~~~~~l 91 (282)
...|+++||+|||||++.++||+|.+++++|++.|++++|+||+| ++++++.++|.++|++.. .++|+++...+..++
T Consensus 5 ~~IKaviFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~lg~~~~-~~~i~~~~~~~~~~~ 83 (259)
T 2ho4_A 5 RALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS-EDEIFTSLTAARNLI 83 (259)
T ss_dssp -CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC-GGGEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC-HHHCCCHHHHHHHHH
T ss_conf 4798999929980282993480199999999987997899828998999999999998089876-100146799999999
Q ss_pred HHHC-CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
Q ss_conf 8531-654543872521243117973157556786899843771001179999999999730574031266432256630
Q gi|254780847|r 92 VEES-HNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKDKTEDYRMLLERFAHRHIPLICANPDIVANRGNK 170 (282)
Q Consensus 92 ~~~~-~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~~~~~~~~l~~~~~~~~~~~i~~N~D~~~p~~~~ 170 (282)
++.. ++.++.+...+.+. . ++ ...+.+. ++.+.... ..........++ +++++++++++|+|..++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~-~~~~~~~~-~~~~~~l~~~~~-~l~~g~~li~~n~d~~~~~~~~ 154 (259)
T 2ho4_A 84 EQKQVRPMLLLDDRALPEF-T--GV---QTQDPNA-VVIGLAPE-HFHYQLLNQAFR-LLLDGAPLIAIHKARYYKRKDG 154 (259)
T ss_dssp HHHTCCEEEESCGGGGGGG-T--TC---CCSSCCE-EEECCCGG-GCBHHHHHHHHH-HHHTTCCEEESCCCSEEEETTE
T ss_pred HHCCCCEEEEECCHHHHHH-C--CC---CCCCCCE-EEEECCCC-CCCHHHHHHHHH-HHHCCCCEECCCCCCCCCCCCC
T ss_conf 9648976999723123333-0--45---5257726-99843676-568999999999-9875984012247722235776
Q ss_pred HHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 01104899998875047-65323477702589999986543148890008997388578899999769969997186787
Q gi|254780847|r 171 IIPCAGALALIYQQLNG-IVKMIGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGIDALYVSDGIHR 249 (282)
Q Consensus 171 ~~~~~G~~~~~~~~~~g-~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~~~ 249 (282)
..+++|+++..++.+.+ ++..+|||+|.+|+.|++++ +++|++|+||||+++|||.||+++||+|+||+||.++
T Consensus 155 ~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l-----gi~p~~~~~VGD~~~~DI~~a~~aG~~si~V~~G~~~ 229 (259)
T 2ho4_A 155 LALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDA-----DCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYK 229 (259)
T ss_dssp EEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGG-----TCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCC
T ss_pred CCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH-----CCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 00356437899998528740432068469999999982-----4485210475477377899999879969998999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf 77842048898899989986089884230421
Q gi|254780847|r 250 HEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL 281 (282)
Q Consensus 250 ~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l 281 (282)
.++....+ ..|||+++++
T Consensus 230 ~~~~~~~~--------------~~pd~v~~sl 247 (259)
T 2ho4_A 230 AADEEKIN--------------PPPYLTCESF 247 (259)
T ss_dssp TTGGGGSS--------------SCCSEEESCH
T ss_pred HHHHHCCC--------------CCCCEEECCH
T ss_conf 77874568--------------9996898999