HHsearch results for GI: 254780847 and protein with PDBid: 2ho4_A

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=100.00  E-value=2.2e-41  Score=290.29  Aligned_cols=240  Identities=18%  Similarity=0.253  Sum_probs=188.6

Q ss_pred             HCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHH
Q ss_conf             417999992744323188148627999999998798199985989-9958999987512777000013568799999999
Q gi|254780847|r   13 PYYDVILCDVWGVLHNGQKFLPGTIPALKEARENGLKVILFTNSP-RPSASVISQIQSLGSSSQFWDDIITSGDLTHHLL   91 (282)
Q Consensus        13 ~~yd~~lfD~DGvL~~g~~~ipgA~e~l~~L~~~g~~~~~lTN~s-~~~~~~~~~L~~lG~~~~~~d~I~ts~~~~~~~l   91 (282)
                      ...|+++||+|||||++.++||+|.+++++|++.|++++|+||+| ++++++.++|.++|++.. .++|+++...+..++
T Consensus         5 ~~IKaviFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~lg~~~~-~~~i~~~~~~~~~~~   83 (259)
T 2ho4_A            5 RALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS-EDEIFTSLTAARNLI   83 (259)
T ss_dssp             -CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC-GGGEEEHHHHHHHHH
T ss_pred             CCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC-HHHCCCHHHHHHHHH
T ss_conf             4798999929980282993480199999999987997899828998999999999998089876-100146799999999


Q ss_pred             HHHC-CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
Q ss_conf             8531-654543872521243117973157556786899843771001179999999999730574031266432256630
Q gi|254780847|r   92 VEES-HNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDEKDKTEDYRMLLERFAHRHIPLICANPDIVANRGNK  170 (282)
Q Consensus        92 ~~~~-~~v~viG~~~~~~~l~~~g~~~~~~~~~~~iv~~g~~~~~~~~~~~~~~l~~~~~~~~~~~i~~N~D~~~p~~~~  170 (282)
                      ++.. ++.++.+...+.+. .  ++   ...+.+. ++.+.... ..........++ +++++++++++|+|..++....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~-~~~~~~~~-~~~~~~l~~~~~-~l~~g~~li~~n~d~~~~~~~~  154 (259)
T 2ho4_A           84 EQKQVRPMLLLDDRALPEF-T--GV---QTQDPNA-VVIGLAPE-HFHYQLLNQAFR-LLLDGAPLIAIHKARYYKRKDG  154 (259)
T ss_dssp             HHHTCCEEEESCGGGGGGG-T--TC---CCSSCCE-EEECCCGG-GCBHHHHHHHHH-HHHTTCCEEESCCCSEEEETTE
T ss_pred             HHCCCCEEEEECCHHHHHH-C--CC---CCCCCCE-EEEECCCC-CCCHHHHHHHHH-HHHCCCCEECCCCCCCCCCCCC
T ss_conf             9648976999723123333-0--45---5257726-99843676-568999999999-9875984012247722235776


Q ss_pred             HHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             01104899998875047-65323477702589999986543148890008997388578899999769969997186787
Q gi|254780847|r  171 IIPCAGALALIYQQLNG-IVKMIGKPHLPIYEMAFKKISSLCNSFNKKRILAIGDGMDTDIKGALQSGIDALYVSDGIHR  249 (282)
Q Consensus       171 ~~~~~G~~~~~~~~~~g-~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~lmIGD~l~tDI~gA~~~G~~silV~tG~~~  249 (282)
                      ..+++|+++..++.+.+ ++..+|||+|.+|+.|++++     +++|++|+||||+++|||.||+++||+|+||+||.++
T Consensus       155 ~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l-----gi~p~~~~~VGD~~~~DI~~a~~aG~~si~V~~G~~~  229 (259)
T 2ho4_A          155 LALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDA-----DCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYK  229 (259)
T ss_dssp             EEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGG-----TCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCC
T ss_pred             CCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH-----CCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             00356437899998528740432068469999999982-----4485210475477377899999879969998999999


Q ss_pred             HHHHHHCCCCHHHHHHHHHHCCCCCCEECHHH
Q ss_conf             77842048898899989986089884230421
Q gi|254780847|r  250 HEYLFNDNIDAQMLQNFFTKKNLYPHWWIQQL  281 (282)
Q Consensus       250 ~~~~~~~~~~~~~i~~~~~~~~~~P~~~~~~l  281 (282)
                      .++....+              ..|||+++++
T Consensus       230 ~~~~~~~~--------------~~pd~v~~sl  247 (259)
T 2ho4_A          230 AADEEKIN--------------PPPYLTCESF  247 (259)
T ss_dssp             TTGGGGSS--------------SCCSEEESCH
T ss_pred             HHHHHCCC--------------CCCCEEECCH
T ss_conf             77874568--------------9996898999