RPSBLAST alignment of GI: 254780847 and protein with PDBid: 1rkq

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282

 Score = 41.1 bits (95), Expect = 3e-04
 Identities = 36/226 (15%), Positives = 70/226 (30%), Gaps = 22/226 (9%)

Query: 17  VILCDVWGVLHNGQKFL-PGTIPALKEARENGLKVILFTNSPRPSASVISQIQSLGSSSQ 75
           +I  D+ G L      + P    A+  AR  G+ V+L T   RP A V + ++ L     
Sbjct: 7   LIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTG--RPYAGVHNYLKELHMEQP 64

Query: 76  FWDDIITSGDLTHHLLVEESHNIFFIGPQRDYALLEKLNIKIVNEQHAETILCTGLYDDE 135
               I  +G L        +     +          +   K+  E  +            
Sbjct: 65  GDYCITYNGALVQKAADGSTVAQTALSYDDY-----RFLEKLSREVGSHFHALDRTTLYT 119

Query: 136 KDKTEDYRMLLERFAHRHIPLICANPDIVANRGNKIIPCAGALALIYQQLNGIVKMIGKP 195
            ++   Y  + E F      + C    +  N     +      A++ Q +  I + + + 
Sbjct: 120 ANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK 179

Query: 196 HLPIYEMAFK--------------KISSLCNSFNKKRILAIGDGMD 227
           +  +    +               K  +       + I+AIGD  +
Sbjct: 180 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQEN 225