Query gi|254780848|ref|YP_003065261.1| co-chaperonin GroES [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 111
No_of_seqs 103 out of 1601
Neff 6.2
Searched_HMMs 23785
Date Tue May 31 21:47:29 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780848.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p3h_A 10 kDa chaperonin; beta 100.0 3.5E-31 1.5E-35 192.6 12.0 98 5-106 1-99 (99)
2 3nx6_A 10KDA chaperonin; bacte 100.0 3.4E-31 1.4E-35 192.6 10.6 94 7-104 1-94 (95)
3 1pcq_O Groes protein; chaperon 100.0 4E-31 1.7E-35 192.3 9.8 95 7-105 1-96 (97)
4 1we3_O CPN10(groes); chaperoni 100.0 2.7E-31 1.2E-35 193.2 8.9 100 2-105 1-100 (100)
5 1g31_A GP31; chaperone, CO-cha 95.5 0.013 5.3E-07 33.7 4.1 91 4-104 4-110 (111)
6 3goh_A Alcohol dehydrogenase, 75.6 2.4 0.0001 21.1 3.7 46 46-103 67-112 (315)
7 1kol_A Formaldehyde dehydrogen 74.7 1.4 6.1E-05 22.3 2.4 53 11-77 31-92 (398)
8 3m6i_A L-arabinitol 4-dehydrog 72.4 1.9 8.1E-05 21.6 2.5 24 46-78 81-104 (363)
9 1yqd_A Sinapyl alcohol dehydro 71.6 3 0.00013 20.6 3.4 24 46-78 79-102 (366)
10 3krt_A Crotonyl COA reductase; 70.0 2.3 9.5E-05 21.2 2.5 23 46-77 126-148 (456)
11 3fpc_A NADP-dependent alcohol 69.5 3.2 0.00013 20.4 3.1 55 10-77 21-84 (352)
12 2c0c_A Zinc binding alcohol de 68.9 6 0.00025 18.9 4.4 41 46-101 92-132 (362)
13 3gqv_A Enoyl reductase; medium 68.1 3.5 0.00015 20.2 3.1 81 10-101 33-119 (371)
14 2cdc_A Glucose dehydrogenase g 67.4 4.7 0.0002 19.5 3.6 20 46-77 69-88 (366)
15 1piw_A Hypothetical zinc-type 67.0 2.8 0.00012 20.7 2.4 24 46-77 71-94 (360)
16 3ip1_A Alcohol dehydrogenase, 66.8 4.4 0.00019 19.6 3.4 56 46-105 100-177 (404)
17 1vj0_A Alcohol dehydrogenase, 66.7 4.6 0.0002 19.5 3.5 28 46-77 80-107 (380)
18 3gaz_A Alcohol dehydrogenase s 65.1 6.7 0.00028 18.6 4.0 49 46-104 72-120 (343)
19 2vn8_A Reticulon-4-interacting 63.2 7.7 0.00032 18.3 4.1 46 46-103 103-148 (375)
20 3gms_A Putative NADPH:quinone 60.9 8.6 0.00036 18.0 4.9 74 11-102 30-112 (340)
21 2eih_A Alcohol dehydrogenase; 60.3 7.3 0.00031 18.4 3.6 48 46-103 66-135 (343)
22 2cf5_A Atccad5, CAD, cinnamyl 59.8 5.3 0.00022 19.2 2.7 23 46-77 72-94 (357)
23 2dph_A Formaldehyde dismutase; 56.7 5.6 0.00024 19.0 2.5 22 46-76 69-90 (398)
24 1pl8_A Human sorbitol dehydrog 54.5 6.7 0.00028 18.6 2.5 59 11-79 29-96 (356)
25 1gu7_A 2,4-dienoyl-COA reducta 53.1 8.9 0.00037 17.9 3.0 42 46-102 81-123 (364)
26 1cdo_A Alcohol dehydrogenase; 50.7 11 0.00046 17.4 3.1 24 46-78 71-94 (374)
27 3fbg_A Putative arginate lyase 48.4 14 0.00059 16.8 5.0 46 46-103 68-113 (346)
28 1uuf_A YAHK, zinc-type alcohol 48.0 10 0.00044 17.5 2.7 54 11-77 45-107 (369)
29 1wly_A CAAR, 2-haloacrylate re 47.4 15 0.00061 16.7 4.9 78 11-103 26-112 (333)
30 3pi7_A NADH oxidoreductase; gr 47.3 10 0.00043 17.6 2.6 47 46-103 88-134 (349)
31 1p0f_A NADP-dependent alcohol 47.1 9.9 0.00042 17.7 2.5 22 46-76 71-92 (373)
32 1e3j_A NADP(H)-dependent ketos 44.0 17 0.0007 16.4 3.5 84 10-103 25-139 (352)
33 2fzw_A Alcohol dehydrogenase c 42.6 17 0.00073 16.3 3.1 55 11-78 29-92 (373)
34 2jhf_A Alcohol dehydrogenase E 40.1 19 0.0008 16.1 3.1 24 46-78 70-93 (374)
35 1f8f_A Benzyl alcohol dehydrog 39.8 17 0.00071 16.4 2.7 23 46-77 68-90 (371)
36 3meq_A Alcohol dehydrogenase, 38.3 18 0.00077 16.2 2.7 23 46-77 89-111 (365)
37 1e3i_A Alcohol dehydrogenase, 38.3 18 0.00076 16.2 2.7 22 46-76 70-91 (376)
38 1rjw_A ADH-HT, alcohol dehydro 36.1 21 0.00088 15.9 2.7 57 10-78 22-87 (339)
39 1zsy_A Mitochondrial 2-enoyl t 36.0 22 0.00094 15.7 4.9 76 11-103 52-136 (357)
40 2kij_A Copper-transporting ATP 33.0 17 0.0007 16.4 1.8 35 46-85 59-96 (124)
41 2dq4_A L-threonine 3-dehydroge 31.1 25 0.001 15.4 2.4 24 46-78 66-89 (343)
42 2ot2_A Hydrogenase isoenzymes 30.2 18 0.00075 16.2 1.6 13 66-78 40-52 (90)
43 1zrr_A E-2/E-2' protein; nicke 28.2 30 0.0013 14.9 4.1 50 46-95 102-153 (179)
44 1z6h_A Biotin/lipoyl attachmen 27.4 31 0.0013 14.9 3.0 32 75-109 39-72 (72)
45 2hcy_A Alcohol dehydrogenase 1 23.2 38 0.0016 14.4 2.5 24 46-78 69-92 (347)
46 3d3r_A Hydrogenase assembly ch 23.1 30 0.0012 15.0 1.6 12 67-78 59-70 (103)
47 1vr3_A Acireductone dioxygenas 22.5 39 0.0016 14.3 5.7 48 47-94 107-157 (191)
48 1z4v_A Hemagglutinin-neuramini 22.3 26 0.0011 15.4 1.2 13 70-82 264-276 (532)
49 3jyn_A Quinone oxidoreductase; 21.6 41 0.0017 14.2 4.9 74 10-101 25-107 (325)
No 1
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=99.97 E-value=3.5e-31 Score=192.58 Aligned_cols=98 Identities=38% Similarity=0.714 Sum_probs=89.2
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCC-CCEECCEECCCCEEEEECCCCCE
Q ss_conf 23242517847999974754212255799457655465302479998238708678-87902203137889970568608
Q gi|254780848|r 5 HKNYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQS-GKVIEPEVSKGDIVLFGKWSGTE 83 (111)
Q Consensus 5 ~~~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~-G~~~p~~vkvGD~Vl~~~~~g~~ 83 (111)
++|+|+||||||||++.+.+++|+ |||+||+++++++ ++|+|+|||+|+++.+ +..+|++||+||+|+|++|+|++
T Consensus 1 ~k~~ikPlgdrVLVk~~~~e~kT~-gGIiLp~~~~~~~--~~G~VvavG~g~~~~~~~~~~p~~vk~GD~Vl~~~~~g~~ 77 (99)
T 1p3h_A 1 AKVNIKPLEDKILVQANEAETTTA-SGLVIPDTAKEKP--QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTE 77 (99)
T ss_dssp CCCEEEECTTEEEEEECCCCCBCT-TSCBCCCSSCCSE--EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEE
T ss_pred CCCCCEECCCEEEEEECCCCCEEE-EEEEECHHHCCCC--EEEEEEEECCEEECCCCCEECCCEEECCCEEEECCCCCEE
T ss_conf 984457758999999821056441-0499880660674--5899999714078168989728878569899980548759
Q ss_pred EEECCCCEEEEEEHHHEEEEEEC
Q ss_conf 89769977999853017899845
Q gi|254780848|r 84 IKLNDGEEYLVMQESDIMGIVVE 106 (111)
Q Consensus 84 v~~~dg~~y~i~~e~dIlavi~~ 106 (111)
|++ ||++|++++++||||++++
T Consensus 78 v~~-~g~~y~ii~e~dIlAvi~e 99 (99)
T 1p3h_A 78 IKY-NGEEYLILSARDVLAVVSK 99 (99)
T ss_dssp EEE-TTEEEEEEEGGGEEEEEEC
T ss_pred EEE-CCEEEEEEEHHHEEEEEEC
T ss_conf 999-9999999997878999949
No 2
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV}
Probab=99.97 E-value=3.4e-31 Score=192.62 Aligned_cols=94 Identities=36% Similarity=0.707 Sum_probs=88.1
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEE
Q ss_conf 24251784799997475421225579945765546530247999823870867887902203137889970568608897
Q gi|254780848|r 7 NYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKL 86 (111)
Q Consensus 7 ~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~ 86 (111)
|+|+||+|||||++.+.+++|+ |||+||+++++++ ++|+|+|||+|+++++|+.+|++|++||+|+|++|+|+++++
T Consensus 1 M~ikPl~drVLV~~~~~e~~T~-gGIiLp~~~~~~~--~~g~VvavG~G~~~~~g~~~~~~vk~GD~Vlf~~~~g~~v~~ 77 (95)
T 3nx6_A 1 MSIKPLHDRVVVKPIEADEVSA-GGIVIPDSAKEKS--TKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKS 77 (95)
T ss_dssp -CCCCCTTEEEEEEC--------------------C--EEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEE
T ss_pred CCCEECCCEEEEEECCCCCEEC-CCEEECCCCCCCC--EEEEEEEECCCEECCCCCEECCCCCCCCEEEEECCCCEEEEE
T ss_conf 9404868999999853166741-6589787314483--023889972878738998933330217899980558749999
Q ss_pred CCCCEEEEEEHHHEEEEE
Q ss_conf 699779998530178998
Q gi|254780848|r 87 NDGEEYLVMQESDIMGIV 104 (111)
Q Consensus 87 ~dg~~y~i~~e~dIlavi 104 (111)
||++|+++|++||+|+|
T Consensus 78 -~g~~y~ii~e~dIlavi 94 (95)
T 3nx6_A 78 -EGVEYKVLREDDILAVI 94 (95)
T ss_dssp -TTEEEEEEEGGGEEEEC
T ss_pred -CCEEEEEEEHHHEEEEE
T ss_conf -99999999978889991
No 3
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=99.97 E-value=4e-31 Score=192.29 Aligned_cols=95 Identities=40% Similarity=0.647 Sum_probs=87.1
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCE-EE
Q ss_conf 24251784799997475421225579945765546530247999823870867887902203137889970568608-89
Q gi|254780848|r 7 NYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTE-IK 85 (111)
Q Consensus 7 ~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~-v~ 85 (111)
|+|+||+|||||++.+.+++|+ |||+||+++++++ ++|+|+|||||+++++|+.+|++|++||+|+|++|+|.+ ++
T Consensus 1 m~ikPl~drVLV~~~~~e~kT~-gGIiLp~~~~~k~--~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~~~~ 77 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSA-GGIVLTGSAAAKS--TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEK 77 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTT-TSSCCCCCCSCCC--CEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEE
T ss_pred CCCEECCCEEEEEECCCCCEEC-CEEEECCCCCCCC--EEEEEEEECCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEE
T ss_conf 9832869989998864176764-4599676324574--057999986847957998922616999999983655863797
Q ss_pred ECCCCEEEEEEHHHEEEEEE
Q ss_conf 76997799985301789984
Q gi|254780848|r 86 LNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 86 ~~dg~~y~i~~e~dIlavi~ 105 (111)
+ ||++|++++++||+|+++
T Consensus 78 ~-~g~~y~ii~e~dIlAvie 96 (97)
T 1pcq_O 78 I-DNEEVLIMSESDILAIVE 96 (97)
T ss_dssp E-TTEEEEEEEGGGEEEEEE
T ss_pred E-CCEEEEEEEHHHEEEEEE
T ss_conf 8-997999999788799995
No 4
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=99.97 E-value=2.7e-31 Score=193.17 Aligned_cols=100 Identities=43% Similarity=0.808 Sum_probs=92.5
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 86523242517847999974754212255799457655465302479998238708678879022031378899705686
Q gi|254780848|r 2 VGEHKNYLRPTRGRVVVRRLQSEIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 2 ~~~~~~~ikPl~drVLVk~~~~e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
+.+.+++|+||||||||++.+.+++|. |||+||+++++++ ..|+|||+|+|++..+|+.+|++|++||+|+|++|+|
T Consensus 1 a~~~~~~ikPlgdrVLV~~~~~e~kT~-gGI~Lp~~~~e~~--~~g~Vvavg~g~~~~~g~~~p~~vk~GD~Vlf~~~~g 77 (100)
T 1we3_O 1 AAEVKTVIKPLGDRVVVKRIEEEPKTK-GGIVLPDTAKEKP--QKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGG 77 (100)
T ss_dssp ----CCCEEECTTCEEEEECCCCSSCT-TCCCCCTTTSCCC--SEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCS
T ss_pred CCHHCCCCEECCCEEEEEECCCCCEEE-CCEEECCCCCCCC--EEEEEEEECCEEECCCCCEECCEEEECCEEEECCCCC
T ss_conf 900325743268999998853045431-3289886226674--0789999644589799989688586188999856687
Q ss_pred CEEEECCCCEEEEEEHHHEEEEEE
Q ss_conf 088976997799985301789984
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMGIVV 105 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIlavi~ 105 (111)
+++++ ||++|++++++||+|+++
T Consensus 78 ~~i~~-~g~~y~ii~e~dIlavie 100 (100)
T 1we3_O 78 TEIEI-DGEEYVILSERDLLAVLQ 100 (100)
T ss_dssp EEEEC-SSCEEEEECTTTEEEEEC
T ss_pred CEEEE-CCEEEEEEEHHHEEEEEC
T ss_conf 19999-999999999798799959
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=95.47 E-value=0.013 Score=33.75 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=57.7
Q ss_pred CCCCCCCCCCCEEEEEECCC----CCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 52324251784799997475----42122557994576554653024799982387086788790220313788997056
Q gi|254780848|r 4 EHKNYLRPTRGRVVVRRLQS----EIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 4 ~~~~~ikPl~drVLVk~~~~----e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
-.-..|+.+++.|++....+ |.++.+| |+|-...+ ..-...|+|++|||..... -+++||.|+.+.-
T Consensus 4 ms~L~ikA~~eyVIi~~~a~~aGdEi~S~~G-ivlG~r~q-gEiP~~g~V~SVGpdVPe~-------~~k~G~~v~lP~G 74 (111)
T 1g31_A 4 VQQLPIRAVGEYVILVSEPAQAGDEEVTESG-LIIGKRVQ-GEVPELCVVHSVGPDVPEG-------FCEVGDLTSLPVG 74 (111)
T ss_dssp -CCCSCEECTTEEEEEECSSCGGGCTTSCTT-CCCCHHHH-HHSEEEEEEEEECTTSCTT-------SCCTTCEEEEEGG
T ss_pred HHHCCCCCCCCEEEEEECCCCCCCEEECCCC-EEEEEECC-CCCCEEEEEEEECCCCCHH-------HHCCCCEEECCCC
T ss_conf 4226721025489998133237855442453-59985116-8786467999848999978-------8333537776676
Q ss_pred CCCEE------------EECCCCEEEEEEHHHEEEEE
Q ss_conf 86088------------97699779998530178998
Q gi|254780848|r 80 SGTEI------------KLNDGEEYLVMQESDIMGIV 104 (111)
Q Consensus 80 ~g~~v------------~~~dg~~y~i~~e~dIlavi 104 (111)
.=.++ +-.+ ++|..++...|-++.
T Consensus 75 ~m~NVPdP~~i~G~~~~ke~r-~k~vt~HyK~I~~iY 110 (111)
T 1g31_A 75 QIRNVPHPFVALGLKQPKEIK-QKFVTCHYKAIPCLY 110 (111)
T ss_dssp GCEEECCHHHHTTSSCGGGCC-CCEEEEEGGGCCEEC
T ss_pred CCCCCCCHHHHCCCCCHHHHH-HHHHHHHHHCEEEEE
T ss_conf 526798817962657877865-554114442303230
No 6
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein; 1.55A {Shewanella oneidensis mr-1}
Probab=75.61 E-value=2.4 Score=21.10 Aligned_cols=46 Identities=24% Similarity=0.256 Sum_probs=29.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|++.. ..++||+|.+...... ..--.+|..++++.+.-+
T Consensus 67 ~G~V~~vG~~v~---------~~~~Gd~V~~~~~~~~---~G~~aey~~v~~~~~~~i 112 (315)
T 3goh_A 67 AGVIVKVGAKVD---------SKMLGRRVAYHTSLKR---HGSFAEFTVLNTDRVMTL 112 (315)
T ss_dssp EEEEEEECTTSC---------GGGTTCEEEEECCTTS---CCSSBSEEEEETTSEEEC
T ss_pred EEEEEEECCCCE---------EECCCCEECCCCCCCC---CCCCEEEEEEEEEEEECC
T ss_conf 999999477200---------4225636614433588---986404788766214227
No 7
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=74.74 E-value=1.4 Score=22.31 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=29.8
Q ss_pred CCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 17847999974754-----2122557994576554653----0247999823870867887902203137889970
Q gi|254780848|r 11 PTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 11 Pl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
|--+-||||..-.- -.+-.|. + + ...|. -..|+|+++|++.. .+++||+|.+.
T Consensus 31 ~~~~eVlVkv~a~gic~sD~~~~~G~-~-~---~~~P~i~GhE~~G~V~~vG~~v~---------~~kvGDrV~~~ 92 (398)
T 1kol_A 31 KIEHGVILKVVSTNICGSDQHMVRGR-T-T---AQVGLVLGHEITGEVIEKGRDVE---------NLQIGDLVSVP 92 (398)
T ss_dssp BCSSCEEEEEEEEECCHHHHHHHTTC-S-C---CCTTCBCCCCEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred CCCCEEEEEEEEEEECHHHHHHHCCC-C-C---CCCCEEEEEEEEEEEEEECCCCC---------CCCCCCEEEEE
T ss_conf 99897999999999899999986699-9-9---99997813889999999889998---------68789986760
No 8
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.39 E-value=1.9 Score=21.63 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=18.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++.. .+++||+|.+..
T Consensus 81 ~G~Vv~vG~~v~---------~~k~GDrV~~~~ 104 (363)
T 3m6i_A 81 AGEVIAVHPSVK---------SIKVGDRVAIEP 104 (363)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEECC
T ss_conf 999999899997---------786788850222
No 9
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant defense, biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=71.56 E-value=3 Score=20.56 Aligned_cols=24 Identities=42% Similarity=0.491 Sum_probs=18.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++.. ..++||+|....
T Consensus 79 ~G~V~~vG~~V~---------~~~vGdrV~~~~ 102 (366)
T 1yqd_A 79 VGEVTEVGSKVK---------KVNVGDKVGVGC 102 (366)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEC
T ss_conf 999999889755---------465687787714
No 10
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2, protein structure initiative; 2.19A {Streptomyces coelicolor}
Probab=70.00 E-value=2.3 Score=21.23 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=18.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++.. .+++||+|+..
T Consensus 126 ~G~Vv~vG~~V~---------~~kvGDrV~~~ 148 (456)
T 3krt_A 126 AGVVLRTGPGVN---------AWQAGDEVVAH 148 (456)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEE
T ss_conf 999999899997---------57779888985
No 11
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=69.46 E-value=3.2 Score=20.41 Aligned_cols=55 Identities=25% Similarity=0.294 Sum_probs=29.8
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCCC----EEEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 5178479999747542-----1225579945765546530----247999823870867887902203137889970
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPSA----SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~~----~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
+|--+-||||..-.-- ..-.++- .+ ...|.. ..|+|+++|++.. ..|+||+|+..
T Consensus 21 ~p~~~evlVkv~~~gin~sD~~~~~~~~-~~---~~~P~v~G~E~~G~V~~vG~~v~---------~~kvGD~V~~~ 84 (352)
T 3fpc_A 21 APGPFDAIVRPLAVAPCTSDIHTVFEGA-IG---ERHNMILGHEAVGEVVEVGSEVK---------DFKPGDRVVVP 84 (352)
T ss_dssp CCCTTCEEEEEEEEECCHHHHHHHHSCT-TC---CCSSEECCCEEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCC-CC---CCCCEEEEEEEEEEEEEECCCCC---------CCCCCCEEEEE
T ss_conf 8999989999999988899999981899-89---99998531879999999889861---------03587277664
No 12
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2wek_A*
Probab=68.87 E-value=6 Score=18.87 Aligned_cols=41 Identities=22% Similarity=0.223 Sum_probs=27.0
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEE
Q ss_conf 47999823870867887902203137889970568608897699779998530178
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIM 101 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIl 101 (111)
.|+|+++|++... ..++||+|.+...++ -.+|.+.+...+.
T Consensus 92 ~G~Vv~vG~~v~~--------~~kvGdrV~~~~~g~-------~~~~~~~~~~~~~ 132 (362)
T 2c0c_A 92 IGEVVALGLSASA--------RYTVGQAVAYMAPGS-------FAEYTVVPASIAT 132 (362)
T ss_dssp EEEEEEECTTGGG--------TCCTTCEEEEECSCC-------SBSEEEEEGGGCE
T ss_pred EEEEEEECCCCCE--------ECCCCCEEEECCCCC-------CCCCCHHHHHHHH
T ss_conf 9999998678631--------003787677678844-------3223111334321
No 13
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NADP-binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=68.11 E-value=3.5 Score=20.15 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=38.6
Q ss_pred CCCCCEEEEEECCC----CCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCC-EE
Q ss_conf 51784799997475----42122557994576554653024799982387086788790220313788997056860-88
Q gi|254780848|r 10 RPTRGRVVVRRLQS----EIKTATGNILIPDTVSEKPSASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGT-EI 84 (111)
Q Consensus 10 kPl~drVLVk~~~~----e~~T~~GgI~lp~~~~ek~~~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~-~v 84 (111)
.|-.|-||||..-. .+..-.|+...|...-- .-..|+|+++|++.. .+++||+|+...+... ..
T Consensus 33 ~~~~~evlVkv~a~gi~~~D~~~~~~~~~~~~i~G--~E~~G~V~~vG~~v~---------~~~~Gd~V~~~~~~~~~~~ 101 (371)
T 3gqv_A 33 MLPRDQVYVRVEAVAINPSDTSMRGQFATPWAFLG--TDYAGTVVAVGSDVT---------HIQVGDRVYGAQNEMCPRT 101 (371)
T ss_dssp CCCTTSEEEEEEEEECCGGGGC-----CCTTSCCC--SEEEEEEEEECTTCC---------SCCTTCEEEEECCTTCTTC
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCC--EEEEEEEEEECCCCC---------CCCCCCEEEECCCCCCCCC
T ss_conf 89989899999999568999997468999997560--468999999588579---------9757888755467664663
Q ss_pred -EECCCCEEEEEEHHHEE
Q ss_conf -97699779998530178
Q gi|254780848|r 85 -KLNDGEEYLVMQESDIM 101 (111)
Q Consensus 85 -~~~dg~~y~i~~e~dIl 101 (111)
...-..+|.++..+.+.
T Consensus 102 ~~~G~~aey~~v~~~~~~ 119 (371)
T 3gqv_A 102 PDQGAFSQYTVTRGRVWA 119 (371)
T ss_dssp TTCCSSBSEEECCTTCEE
T ss_pred CCCCCCCCEEEEEEEEEE
T ss_conf 688856223898721266
No 14
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=67.38 E-value=4.7 Score=19.47 Aligned_cols=20 Identities=30% Similarity=0.293 Sum_probs=15.2
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++ +|+||+|...
T Consensus 69 ~G~V~~~g~~------------~k~Gd~V~~~ 88 (366)
T 2cdc_A 69 IGVVEESYHG------------FSQGDLVMPV 88 (366)
T ss_dssp EEEECSCCSS------------CCTTCEEEEC
T ss_pred EEEEEEECCC------------CCCCCEEEEC
T ss_conf 9999993278------------7589876441
No 15
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=67.05 E-value=2.8 Score=20.71 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=18.3
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|+.... .+++||+|...
T Consensus 71 ~G~Vv~vG~~v~~--------~~k~GDrV~v~ 94 (360)
T 1piw_A 71 VGKVVKLGPKSNS--------GLKVGQRVGVG 94 (360)
T ss_dssp EEEEEEECTTCCS--------SCCTTCEEEEC
T ss_pred EEEEEEECCCCCC--------CCCCCCEEEEE
T ss_conf 9999996786556--------88556576553
No 16
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=66.75 E-value=4.4 Score=19.60 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=33.6
Q ss_pred EEEEEEECCCEEC-CCCCEECCEECCCCEEEEECCCC-----------------CEEEE--CC--CCEEEEEEHHHEEEE
Q ss_conf 4799982387086-78879022031378899705686-----------------08897--69--977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMD-QSGKVIEPEVSKGDIVLFGKWSG-----------------TEIKL--ND--GEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~-~~G~~~p~~vkvGD~Vl~~~~~g-----------------~~v~~--~d--g~~y~i~~e~dIlav 103 (111)
.|+|++||++..+ ..|+ .+++||+|....+.. ..... .+ -.+|..+..+.++.+
T Consensus 100 ~G~Vv~vG~~V~~~~~g~----~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~l 175 (404)
T 3ip1_A 100 SGVVVEAGPEAINRRTNK----RFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSL 175 (404)
T ss_dssp EEEEEEECTTCEETTTTE----ECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEC
T ss_pred EEEEEEECCCCCCCCCCC----CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC
T ss_conf 999999888854476787----6747988875333476676423356544324321246688876512245757654405
Q ss_pred EE
Q ss_conf 84
Q gi|254780848|r 104 VV 105 (111)
Q Consensus 104 i~ 105 (111)
-+
T Consensus 176 ~~ 177 (404)
T 3ip1_A 176 RE 177 (404)
T ss_dssp GG
T ss_pred CC
T ss_conf 44
No 17
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=66.67 E-value=4.6 Score=19.49 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=22.0
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++....++. .+++||+|...
T Consensus 80 ~G~Vv~vG~~v~~~~~~----~~~~gd~v~~~ 107 (380)
T 1vj0_A 80 AGRVVEVNGEKRDLNGE----LLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEESSCCBCTTSC----BCCTTCEEEEC
T ss_pred EEEEEEECCEEECCCCC----CEEECCEECCC
T ss_conf 99999977805112565----12304300122
No 18
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 1.96A {Novosphingobium aromaticivorans DSM12444}
Probab=65.05 E-value=6.7 Score=18.62 Aligned_cols=49 Identities=14% Similarity=0.109 Sum_probs=32.0
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEEE
Q ss_conf 47999823870867887902203137889970568608897699779998530178998
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGIV 104 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlavi 104 (111)
.|+|+++|++.. ..++||+|+..-........ -..+|..++.+.++-+-
T Consensus 72 ~G~V~~vG~~v~---------~~~~gd~V~~~~~~~~~~~~-~~~e~~~~~~~~~~~iP 120 (343)
T 3gaz_A 72 AGTVVAVGPEVD---------SFRVGDAVFGLTGGVGGLQG-THAQFAAVDARLLASKP 120 (343)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECCSSTTCCC-SSBSEEEEEGGGEEECC
T ss_pred EEEEEEECCCCC---------CCCCCCCCCCCCCCCCCCCC-CCEEEEEECCCEEEECC
T ss_conf 999967377532---------23567502322221246654-21268873100478658
No 19
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, alternative splicing, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=63.17 E-value=7.7 Score=18.27 Aligned_cols=46 Identities=24% Similarity=0.233 Sum_probs=28.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|++.. .+++||+|.........=.+ -+|..++.+.+.-+
T Consensus 103 ~G~V~~vG~~V~---------~~~~GD~v~~~~~~~~~G~~---ae~~~~~~~~~~~~ 148 (375)
T 2vn8_A 103 SGVVMECGLDVK---------YFKPGDEVWAAVPPWKQGTL---SEFVVVSGNEVSHK 148 (375)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECCTTSCCSS---BSEEEEEGGGEEEC
T ss_pred EEEEEECCCCCC---------CCCCCCEEEEEECCCCCCCC---CEECCCCHHHEEEC
T ss_conf 999998088567---------88778888885448788633---05613637848977
No 20
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=60.85 E-value=8.6 Score=17.99 Aligned_cols=74 Identities=26% Similarity=0.222 Sum_probs=40.7
Q ss_pred CCCCEEEEEECCC-----CCCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 1784799997475-----42122557994576554653----02479998238708678879022031378899705686
Q gi|254780848|r 11 PTRGRVVVRRLQS-----EIKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 11 Pl~drVLVk~~~~-----e~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
|-.+-||||..-. .-....|. + |. ...-|. -..|+|+++|++.. .+++||+|+.....|
T Consensus 30 ~~~~evlV~v~a~gi~~~D~~~~~G~-~-~~-~~~~P~i~G~E~~G~V~~vG~~v~---------~~~vGd~v~~~~~~G 97 (340)
T 3gms_A 30 LKDNEVFVRMLVRPINPSDLIPITGA-Y-AH-RIPLPNIPGYEGVGIVENVGAFVS---------RELIGKRVLPLRGEG 97 (340)
T ss_dssp CCTTEEEEEEEEEECCHHHHGGGGTT-T-TT-TSCSSBCCCSCCEEEEEEECTTSC---------GGGTTCEEEECSSSC
T ss_pred CCCCEEEEEEEEECCCHHHHHHHCCC-C-CC-CCCCCCCCEEEEEEEEEECCCCCC---------CCCCCCEEEECCCCC
T ss_conf 99798999999991199999996799-9-98-899996562789999984571326---------765488776458886
Q ss_pred CEEEECCCCEEEEEEHHHEEE
Q ss_conf 088976997799985301789
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIla 102 (111)
. -.+|.+++.+.+..
T Consensus 98 ~------~ae~~~~~~~~~~~ 112 (340)
T 3gms_A 98 T------WQEYVKTSADFVVP 112 (340)
T ss_dssp S------SBSEEEEEGGGEEE
T ss_pred C------CCCCCCCCHHEEEE
T ss_conf 3------43344110320998
No 21
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA; 2.30A {Thermus thermophilus HB8}
Probab=60.29 E-value=7.3 Score=18.38 Aligned_cols=48 Identities=29% Similarity=0.360 Sum_probs=29.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCC----------------------CCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 47999823870867887902203137889970568----------------------60889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS----------------------GTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~----------------------g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|++.. .+++||+|...... |...... =.+|.+++.+.++-+
T Consensus 66 ~G~V~~~g~~v~---------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~g~-~ae~~~v~~~~~~~i 135 (343)
T 2eih_A 66 SGVVDAVGPGVE---------GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT-YAEYVVLPEANLAPK 135 (343)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCS-SBSEEEEEGGGEEEC
T ss_pred EEEEEECCCCCC---------CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC-CEEEEEEEHHHEEEC
T ss_conf 632101277688---------7999999998565367886333577645476640424567887-325999616996999
No 22
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=59.79 E-value=5.3 Score=19.19 Aligned_cols=23 Identities=43% Similarity=0.651 Sum_probs=18.4
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++.. .+++||+|...
T Consensus 72 ~G~Vv~vG~~v~---------~~~~GD~V~~~ 94 (357)
T 2cf5_A 72 VGEVVEVGSDVS---------KFTVGDIVGVG 94 (357)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEE
T ss_conf 999999899986---------46779889987
No 23
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=56.68 E-value=5.6 Score=19.02 Aligned_cols=22 Identities=32% Similarity=0.490 Sum_probs=17.5
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEE
Q ss_conf 4799982387086788790220313788997
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLF 76 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~ 76 (111)
.|+|+++|++.. .+++||+|..
T Consensus 69 ~G~Vv~vG~~v~---------~~~vGdrV~~ 90 (398)
T 2dph_A 69 TGEVVEKGSDVE---------LMDIGDLVSV 90 (398)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEE
T ss_conf 999999899998---------6889999625
No 24
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A*
Probab=54.46 E-value=6.7 Score=18.62 Aligned_cols=59 Identities=25% Similarity=0.286 Sum_probs=31.1
Q ss_pred CCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECC
Q ss_conf 178479999747542-----122557994576554653----024799982387086788790220313788997056
Q gi|254780848|r 11 PTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKW 79 (111)
Q Consensus 11 Pl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~ 79 (111)
|=-+.||||..-.-- .+-.|+- .+......|. -..|+|+++|+... ..++||+|.+..+
T Consensus 29 ~~~~eVlVkv~~~gin~~D~~~~~~~~-~~~~~~~~P~v~G~E~~G~Vv~vG~~v~---------~~~~Gd~V~~~~~ 96 (356)
T 1pl8_A 29 PGPNEVLLRMHSVGICGSDVHYWEYGR-IGNFIVKKPMVLGHEASGTVEKVGSSVK---------HLKPGDRVAIEPG 96 (356)
T ss_dssp CCTTEEEEEEEEEEECHHHHHHHHHSE-ETTEECSSCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSE
T ss_pred CCCCEEEEEEEEEEECHHHHHHHCCCC-CCCCCCCCCEECCEEEEEEEEEECCEEE---------ECCCCCEEEECCC
T ss_conf 998989999999999889999972787-7887899984541778999999587451---------1368876644111
No 25
>1gu7_A 2,4-dienoyl-COA reductase; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=53.12 E-value=8.9 Score=17.93 Aligned_cols=42 Identities=24% Similarity=0.289 Sum_probs=26.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCC-CCEEEECCCCEEEEEEHHHEEE
Q ss_conf 47999823870867887902203137889970568-6088976997799985301789
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS-GTEIKLNDGEEYLVMQESDIMG 102 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~-g~~v~~~dg~~y~i~~e~dIla 102 (111)
.|+|+++|++.. .+++||+|+..... |. ..+|.+....+.+-
T Consensus 81 ~G~Vv~vG~~v~---------~~~vGd~V~~~~~~~g~------~~~~~~~~~~~~~~ 123 (364)
T 1gu7_A 81 LFEVIKVGSNVS---------SLEAGDWVIPSHVNFGT------WRTHALGNDDDFIK 123 (364)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEESSSCCCC------SBSEEEEEGGGEEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEECCCCCCCC------CCCCCCCCCCEEEE
T ss_conf 999999678754---------55457468225534444------21112567422662
No 26
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=50.70 E-value=11 Score=17.42 Aligned_cols=24 Identities=33% Similarity=0.386 Sum_probs=18.1
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|+... .+++||+|....
T Consensus 71 ~G~V~~vG~~v~---------~~~~GdrV~~~~ 94 (374)
T 1cdo_A 71 AGIVESVGPGVT---------EFQPGEKVIPLF 94 (374)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 999999789987---------677998556754
No 27
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus JCSC1435}
Probab=48.41 E-value=14 Score=16.81 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=29.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|+... .+++||+|...-+.... .-..+|.++.++.+..+
T Consensus 68 ~G~Vv~vG~~v~---------~~~~Gd~v~~~~~~~~~---G~~~~~~~~~~~~~~~~ 113 (346)
T 3fbg_A 68 IGVVESVGNEVT---------MFNQGDIVYYSGSPDQN---GSNAEYQLINERLVAKA 113 (346)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECCCTTSC---CSSBSEEEEEGGGEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCCCCCCCCCCCC---CCCCCCCCHHHHEEECC
T ss_conf 999999799853---------45665311222334789---84300032013204326
No 28
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=47.98 E-value=10 Score=17.54 Aligned_cols=54 Identities=20% Similarity=0.313 Sum_probs=29.2
Q ss_pred CCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 178479999747542-----122557994576554653----0247999823870867887902203137889970
Q gi|254780848|r 11 PTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 11 Pl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
|=-+.||||..-.-- .+-.|. + |. ..-|. -..|+|+++|++.. .+++||+|...
T Consensus 45 pgp~eVLVkv~a~gIc~sD~~~~~g~-~-~~--~~~P~ilGhE~~G~Vv~vG~~v~---------~~~~Gd~V~v~ 107 (369)
T 1uuf_A 45 PGPNDVKIEIAYCGVCHSDLHQVRSE-W-AG--TVYPCVPGHEIVGRVVAVGDQVE---------KYAPGDLVGVG 107 (369)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHCT-T-SC--CCSSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCEEEEEEEEEEECHHHHHHHCCC-C-CC--CCCCEECCEEEEEEEEEECCEEC---------CCCCCCEEEEE
T ss_conf 89998999999997899999997499-9-99--98986273689999999887741---------36789879997
No 29
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase; 1.30A {Burkholderia SP}
Probab=47.36 E-value=15 Score=16.72 Aligned_cols=78 Identities=21% Similarity=0.228 Sum_probs=42.8
Q ss_pred CCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 17847999974754-----2122557994576554653----02479998238708678879022031378899705686
Q gi|254780848|r 11 PTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 11 Pl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
|-.+-||||..-.- -....| .+.+....+.|. -..|+|+++|++.. ..++||+|+...+..
T Consensus 26 p~~~eVlVkv~~~~i~~~D~~~~~g-~~~~~~~~~~p~v~G~e~~G~V~~vG~~v~---------~~~~Gd~V~~~~~~~ 95 (333)
T 1wly_A 26 PGPGQVRLRNTAIGVNFLDTYHRAG-IPHPLVVGEPPIVVGFEAAAVVEEVGPGVT---------DFTVGERVCTCLPPL 95 (333)
T ss_dssp CCTTEEEEEEEEEEECHHHHHHHC-----------CCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECSSSC
T ss_pred CCCCEEEEEEEEEECCHHHHHHHCC-CCCCCCCCCCCEECCEEEEEEEEEECCCCC---------CCCCCCCCCCCCCCC
T ss_conf 9989899999999638889999778-987665678982155687877760067876---------877675234330257
Q ss_pred CEEEECCCCEEEEEEHHHEEEE
Q ss_conf 0889769977999853017899
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIlav 103 (111)
..-.+|..+..+.++.+
T Consensus 96 -----G~~~~~~~~~~~~~~~~ 112 (333)
T 1wly_A 96 -----GAYSQERLYPAEKLIKV 112 (333)
T ss_dssp -----CCSBSEEEEEGGGCEEC
T ss_pred -----CCCEEEEECCHHHEEEC
T ss_conf -----86035896335876853
No 30
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=47.32 E-value=10 Score=17.56 Aligned_cols=47 Identities=19% Similarity=0.170 Sum_probs=28.7
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEEEHHHEEEE
Q ss_conf 4799982387086788790220313788997056860889769977999853017899
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~~e~dIlav 103 (111)
.|+|+++|+.... ..++||+|.+....... .--.+|..+.++.++-+
T Consensus 88 ~G~Vv~vG~~~~~--------~~~vGd~V~~~~~~~~~---G~~aey~~~~~~~~~~i 134 (349)
T 3pi7_A 88 VGTIVAGGDEPYA--------KSLVGKRVAFATGLSNW---GSWAEYAVAEAAACIPL 134 (349)
T ss_dssp EEEEEEECSSHHH--------HHHTTCEEEEECTTSSC---CSSBSEEEEEGGGEEEC
T ss_pred EEEEEEECCCCCC--------CCCCCCEEEEEECCCCC---CCCEEEEEECHHHCCCC
T ss_conf 9999655674444--------67899889986626888---41313588765755578
No 31
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=47.08 E-value=9.9 Score=17.66 Aligned_cols=22 Identities=41% Similarity=0.523 Sum_probs=16.7
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEE
Q ss_conf 4799982387086788790220313788997
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLF 76 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~ 76 (111)
.|+|+++|++.. .+++||+|+.
T Consensus 71 ~G~Vv~vG~~v~---------~~~~Gd~v~~ 92 (373)
T 1p0f_A 71 VGVVESIGAGVT---------CVKPGDKVIP 92 (373)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEE
T ss_pred EEEEEEECCCCC---------EECCCCEEEE
T ss_conf 999999889850---------4556883677
No 32
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=44.02 E-value=17 Score=16.42 Aligned_cols=84 Identities=23% Similarity=0.285 Sum_probs=42.5
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 5178479999747542-----122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
+|-.+-||||..-.-- ..-.|+- .+.....-|. -..|+|+++|++.. ..++||+|.+....
T Consensus 25 ~p~~~eVlVkv~~~~in~~D~~~~~g~~-~~~~~~~~P~v~G~E~~G~V~~~g~~v~---------~~~~Gd~V~~~~~~ 94 (352)
T 1e3j_A 25 EPKEDEVLLQMAYVGICGSDVHYYEHGR-IADFIVKDPMVIGHEASGTVVKVGKNVK---------HLKKGDRVAVEPGV 94 (352)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHHHHSB-SSSCBCCSCEECCCEEEEEEEEECTTCC---------SCCTTCEEEECCEE
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCCC-CCCCCCCCCEEEEEEEEEEEEEECCCCC---------CCCCCCEEEECCCC
T ss_conf 8998989999999998889999973898-7877789987614768999999789754---------47879987356431
Q ss_pred CC-----------------E---EEECCC--CEEEEEEHHHEEEE
Q ss_conf 60-----------------8---897699--77999853017899
Q gi|254780848|r 81 GT-----------------E---IKLNDG--EEYLVMQESDIMGI 103 (111)
Q Consensus 81 g~-----------------~---v~~~dg--~~y~i~~e~dIlav 103 (111)
+. . ....+| .+|.++..+.+.-+
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 139 (352)
T 1e3j_A 95 PCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL 139 (352)
T ss_dssp CCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECHHHCEEC
T ss_conf 457655236898321014531210168974268998307852438
No 33
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=42.60 E-value=17 Score=16.30 Aligned_cols=55 Identities=25% Similarity=0.374 Sum_probs=29.2
Q ss_pred CCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 178479999747542-----122557994576554653----02479998238708678879022031378899705
Q gi|254780848|r 11 PTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 11 Pl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
|-.+-||||..-.-- ....|.. |.. ..|. -..|+|+++|+... ..++||+|....
T Consensus 29 ~~~~eVlVkv~~~gic~sD~~~~~g~~--~~~--~~P~i~GhE~~G~V~~vG~~v~---------~~~~Gd~V~~~~ 92 (373)
T 2fzw_A 29 PKAHEVRIKIIATAVCHTDAYTLSGAD--PEG--CFPVILGHLGAGIVESVGEGVT---------KLKAGDTVIPLY 92 (373)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTCC--TTC--CSSBCCCCEEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CCCCEEEEEEEEEEECHHHHHHHCCCC--CCC--CCCCCCCEEEEEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 898989999999999899999857999--989--9983163679999999889974---------033899899853
No 34
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 5adh_A* ...
Probab=40.13 E-value=19 Score=16.07 Aligned_cols=24 Identities=33% Similarity=0.394 Sum_probs=17.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|++.. ..++||+|+...
T Consensus 70 ~G~V~~vG~~v~---------~~~~Gd~vv~~~ 93 (374)
T 2jhf_A 70 AGIVESIGEGVT---------TVRPGDKVIPLF 93 (374)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 999999789755---------477898899965
No 35
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=39.78 E-value=17 Score=16.38 Aligned_cols=23 Identities=39% Similarity=0.556 Sum_probs=17.3
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|+|+++|++.. ..++||+|...
T Consensus 68 ~G~Vv~vG~~v~---------~~~~gd~V~~~ 90 (371)
T 1f8f_A 68 SGIIEAIGPNVT---------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCEEE---------ECCCCCEEEEC
T ss_conf 999999686542---------32579778642
No 36
>3meq_A Alcohol dehydrogenase, zinc-containing; structural genomics, infectious disease, seattle structural center for infectious disease, ssgcid; HET: NAI; 2.00A {Brucella suis} PDB: 1llu_A*
Probab=38.30 E-value=18 Score=16.17 Aligned_cols=23 Identities=39% Similarity=0.463 Sum_probs=17.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEE
Q ss_conf 47999823870867887902203137889970
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFG 77 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~ 77 (111)
.|.|+++|++.. .+++||+|..+
T Consensus 89 ~G~V~~~g~~~~---------~~~~Gd~V~~~ 111 (365)
T 3meq_A 89 VGFVSAVGSGVK---------HVKEGDRVGIP 111 (365)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEECCCCCC---------CCCCCCEEEEC
T ss_conf 999998575221---------15679988425
No 37
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=38.28 E-value=18 Score=16.20 Aligned_cols=22 Identities=36% Similarity=0.525 Sum_probs=16.8
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEE
Q ss_conf 4799982387086788790220313788997
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLF 76 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~ 76 (111)
.|+|+++|++.. ..++||+|..
T Consensus 70 ~G~V~~vG~~v~---------~~~~Gdrv~~ 91 (376)
T 1e3i_A 70 AGIVESVGPGVT---------NFKPGDKVIP 91 (376)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEE
T ss_conf 999999889975---------4412872488
No 38
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=36.07 E-value=21 Score=15.86 Aligned_cols=57 Identities=28% Similarity=0.354 Sum_probs=30.3
Q ss_pred CCCCCEEEEEECCCCC-----CCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 5178479999747542-----122557994576554653----02479998238708678879022031378899705
Q gi|254780848|r 10 RPTRGRVVVRRLQSEI-----KTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 10 kPl~drVLVk~~~~e~-----~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
+|--+.||||..-.-- ..-.|. + +.. ...|. -..|+|+++|+... .+++||+|....
T Consensus 22 ~~~~~evlVkv~~~~i~~~D~~~~~g~-~-~~~-~~~p~v~G~e~~G~V~~~g~~v~---------~~~~Gd~V~~~~ 87 (339)
T 1rjw_A 22 TISYGEVLVRIKACGVCHTDLHAAHGD-W-PVK-PKLPLIPGHEGVGIVEEVGPGVT---------HLKVGDRVGIPW 87 (339)
T ss_dssp CCCTTEEEEEEEEEEECHHHHHHHHTC-S-SSC-CCSSBCCCSCEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCC-C-CCC-CCCCEECCEEEEEEEEEECCCCC---------CCCCCCEEEECC
T ss_conf 999898999999992588999996599-8-878-88984373689999975277446---------786788876513
No 39
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, fatty acid synthesis (type 2), structural genomics; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=35.96 E-value=22 Score=15.69 Aligned_cols=76 Identities=21% Similarity=0.270 Sum_probs=40.2
Q ss_pred CCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCCC----EEEEEEEECCCEECCCCCEECCEECCCCEEEEECCCC
Q ss_conf 17847999974754-----21225579945765546530----2479998238708678879022031378899705686
Q gi|254780848|r 11 PTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPSA----SSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWSG 81 (111)
Q Consensus 11 Pl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~~----~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~g 81 (111)
|-.+-||||..-.- -...+|. + + ...+.|.. ..|+|+++|++.. .+++||+|.......
T Consensus 52 ~~~~evlVrv~~~gIc~sD~~~~~G~-~-~-~~~~~P~i~GhE~~G~Vv~vG~~v~---------~~~~gd~V~~~~~~~ 119 (357)
T 1zsy_A 52 VRGSDVRVKMLAAPINPSDINMIQGN-Y-G-LLPELPAVGGNEGVAQVVAVGSNVT---------GLKPGDWVIPANAGL 119 (357)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTC-S-S-CCCCSSEECCSCCEEEEEEECTTCC---------SCCTTCEEEESSSCS
T ss_pred CCCCEEEEEEEEEEECHHHHHHHCCC-C-C-CCCCCCEECCEEEEEEEEECCCCCC---------CCCCCCEEEECCCCC
T ss_conf 99899999999980598999996789-9-9-8999986572778999997366434---------675786474323478
Q ss_pred CEEEECCCCEEEEEEHHHEEEE
Q ss_conf 0889769977999853017899
Q gi|254780848|r 82 TEIKLNDGEEYLVMQESDIMGI 103 (111)
Q Consensus 82 ~~v~~~dg~~y~i~~e~dIlav 103 (111)
. .-.+|..+.++.+.-+
T Consensus 120 ~-----~~aey~~~~~~~~~~~ 136 (357)
T 1zsy_A 120 G-----TWRTEAVFSEEALIQV 136 (357)
T ss_dssp C-----CSBSEEEEEGGGEEEE
T ss_pred C-----CCEEEEEEEEEEEEEC
T ss_conf 5-----5534555512135525
No 40
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=33.05 E-value=17 Score=16.40 Aligned_cols=35 Identities=20% Similarity=0.433 Sum_probs=27.1
Q ss_pred EEEEEEECCCEECC---CCCEECCEECCCCEEEEECCCCCEEE
Q ss_conf 47999823870867---88790220313788997056860889
Q gi|254780848|r 46 SGEIMWVGAGVMDQ---SGKVIEPEVSKGDIVLFGKWSGTEIK 85 (111)
Q Consensus 46 ~G~VvavG~g~~~~---~G~~~p~~vkvGD~Vl~~~~~g~~v~ 85 (111)
-|.|++ |....++ +|+..|..+++||.| |+|+-+.
T Consensus 59 Dg~vi~-g~a~vdes~lTGEs~pi~~~~Gd~v----~aGs~~~ 96 (124)
T 2kij_A 59 DGRVIE-GHSMVDESLITGEAMPVAKKPGSTV----IAGSINQ 96 (124)
T ss_dssp CEEECS-CCCEEECTTTTCCSSCEECCTTEEE----CTTCEEE
T ss_pred EEEEEE-CEEEEEEEECCCCCCEEECCCCCEE----ECCCEEC
T ss_conf 179994-6488987361478721865999999----6897883
No 41
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=31.12 E-value=25 Score=15.43 Aligned_cols=24 Identities=38% Similarity=0.443 Sum_probs=17.9
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|+... ..++||+|....
T Consensus 66 ~G~Vv~~g~~~~---------~~~~gd~V~~~~ 89 (343)
T 2dq4_A 66 SGVVEAVGPGVR---------RPQVGDHVSLES 89 (343)
T ss_dssp EEEEEEECTTCC---------SSCTTCEEEECC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEE
T ss_conf 889999768854---------465687898852
No 42
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=30.18 E-value=18 Score=16.23 Aligned_cols=13 Identities=23% Similarity=0.169 Sum_probs=9.9
Q ss_pred CEECCCCEEEEEC
Q ss_conf 2031378899705
Q gi|254780848|r 66 PEVSKGDIVLFGK 78 (111)
Q Consensus 66 ~~vkvGD~Vl~~~ 78 (111)
..+++||||+..-
T Consensus 40 ~~~~vGDyVLVH~ 52 (90)
T 2ot2_A 40 GQPRVGQWVLVHV 52 (90)
T ss_dssp SCBCTTCEEEEET
T ss_pred CCCCCCCEEEEEC
T ss_conf 6467788999961
No 43
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=28.24 E-value=30 Score=14.95 Aligned_cols=50 Identities=12% Similarity=0.193 Sum_probs=33.1
Q ss_pred EEEEEEECCCEEC--CCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEEE
Q ss_conf 4799982387086--7887902203137889970568608897699779998
Q gi|254780848|r 46 SGEIMWVGAGVMD--QSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLVM 95 (111)
Q Consensus 46 ~G~VvavG~g~~~--~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i~ 95 (111)
.-..+--|.|.+. .+++.+-+.|+.||.+.++..--..+...+...+..+
T Consensus 102 Evr~iv~G~g~f~v~~~~~~~~v~~e~GDlI~vPag~~HwF~~~~~~~~~ai 153 (179)
T 1zrr_A 102 EVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAI 153 (179)
T ss_dssp EEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEE
T ss_pred EEEEEEECEEEEEEECCCEEEEEEECCCCEEEECCCCEEECCCCCCCCEEEE
T ss_conf 5899993609999825982899997479989959998680305898888999
No 44
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=27.44 E-value=31 Score=14.87 Aligned_cols=32 Identities=16% Similarity=0.373 Sum_probs=17.8
Q ss_pred EEECCCCCEEEE--CCCCEEEEEEHHHEEEEEECCCC
Q ss_conf 970568608897--69977999853017899845334
Q gi|254780848|r 75 LFGKWSGTEIKL--NDGEEYLVMQESDIMGIVVEEKK 109 (111)
Q Consensus 75 l~~~~~g~~v~~--~dg~~y~i~~e~dIlavi~~~~~ 109 (111)
+.++++|.=.++ .+|+ .+...+.|+.++++.+
T Consensus 39 v~a~~~G~v~~i~v~~G~---~V~~G~~l~~i~~~se 72 (72)
T 1z6h_A 39 IVADRSGIVKEVKKKEGD---FVNEGDVLLELSNSTQ 72 (72)
T ss_dssp EECSSCEEEEEESSCTTC---EECTTCEEEEEGGGCC
T ss_pred EECCCCEEEEEEEECCCC---EECCCCEEEEEECCCC
T ss_conf 588979899999778979---9899999999947989
No 45
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolecular disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=23.19 E-value=38 Score=14.41 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=17.7
Q ss_pred EEEEEEECCCEECCCCCEECCEECCCCEEEEEC
Q ss_conf 479998238708678879022031378899705
Q gi|254780848|r 46 SGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGK 78 (111)
Q Consensus 46 ~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~ 78 (111)
.|+|+++|+... .+++||+|....
T Consensus 69 ~G~V~~vg~~~~---------~~~~Gd~V~~~~ 92 (347)
T 2hcy_A 69 AGVVVGMGENVK---------GWKIGDYAGIKW 92 (347)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred EEEEEEECCCCC---------CCCCCCCEEEEE
T ss_conf 999986077014---------655676035752
No 46
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein structure initiative; 1.85A {Shewanella oneidensis mr-1} SCOP: b.40.14.1
Probab=23.12 E-value=30 Score=15.02 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=9.0
Q ss_pred EECCCCEEEEEC
Q ss_conf 031378899705
Q gi|254780848|r 67 EVSKGDIVLFGK 78 (111)
Q Consensus 67 ~vkvGD~Vl~~~ 78 (111)
.+++|||||..-
T Consensus 59 ~v~vGDyVLVHa 70 (103)
T 3d3r_A 59 PLAIGDYVLIHI 70 (103)
T ss_dssp CCCTTCEEEEEE
T ss_pred CCCCCCEEEEEC
T ss_conf 888998999951
No 47
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=22.53 E-value=39 Score=14.33 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=34.2
Q ss_pred EEEEEECCCEEC---CCCCEECCEECCCCEEEEECCCCCEEEECCCCEEEE
Q ss_conf 799982387086---788790220313788997056860889769977999
Q gi|254780848|r 47 GEIMWVGAGVMD---QSGKVIEPEVSKGDIVLFGKWSGTEIKLNDGEEYLV 94 (111)
Q Consensus 47 G~VvavG~g~~~---~~G~~~p~~vkvGD~Vl~~~~~g~~v~~~dg~~y~i 94 (111)
-..|--|.|.+. .+++.+.+.|+.||.+..+..--..+...+...+..
T Consensus 107 Ir~vl~G~G~F~vr~~~~~~iri~~~~GDlI~iPag~~HwFtl~~~~~ika 157 (191)
T 1vr3_A 107 IRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKA 157 (191)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEE
T ss_pred EEEEEECCEEEEEECCCCCEEEEEEECCCEEEECCCCCEECCCCCCCCEEE
T ss_conf 999997859999988998499999967989997999826132688887899
No 48
>1z4v_A Hemagglutinin-neuraminidase; hydrolase; HET: NDG NAG DAN; 2.30A {Simian virus 5} PDB: 1z4w_A* 1z4x_A* 1z4y_A* 1z4z_A* 1z50_A*
Probab=22.29 E-value=26 Score=15.35 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=8.3
Q ss_pred CCCEEEEECCCCC
Q ss_conf 3788997056860
Q gi|254780848|r 70 KGDIVLFGKWSGT 82 (111)
Q Consensus 70 vGD~Vl~~~~~g~ 82 (111)
.+|+++|+-|+|.
T Consensus 264 ~~~~l~Fp~YGGl 276 (532)
T 1z4v_A 264 YLGWVLFPIYGGV 276 (532)
T ss_dssp ETTEEEEEEEEEE
T ss_pred ECCEEEEEEECCC
T ss_conf 9999999876785
No 49
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=21.65 E-value=41 Score=14.23 Aligned_cols=74 Identities=27% Similarity=0.310 Sum_probs=39.4
Q ss_pred CCCCCEEEEEECCCC-----CCCCCCEEEECCCCCCCCC----CEEEEEEEECCCEECCCCCEECCEECCCCEEEEECCC
Q ss_conf 517847999974754-----2122557994576554653----0247999823870867887902203137889970568
Q gi|254780848|r 10 RPTRGRVVVRRLQSE-----IKTATGNILIPDTVSEKPS----ASSGEIMWVGAGVMDQSGKVIEPEVSKGDIVLFGKWS 80 (111)
Q Consensus 10 kPl~drVLVk~~~~e-----~~T~~GgI~lp~~~~ek~~----~~~G~VvavG~g~~~~~G~~~p~~vkvGD~Vl~~~~~ 80 (111)
.|--+-||||..-.- -....|. + |. ...|. -..|.|+++|+... .+++||+|.+....
T Consensus 25 ~~~~~evlVkv~~~~i~~~D~~~~~G~-~-~~--~~~p~v~G~e~~G~V~~~g~~v~---------~~~vGd~V~~~~~~ 91 (325)
T 3jyn_A 25 APGPQAVVVRNKAIGLNFIDTYYRSGL-Y-PA--PFLPSGLGAEGAGVVEAVGDEVT---------RFKVGDRVAYGTGP 91 (325)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHTS-S-CC--SSSSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEESSSS
T ss_pred CCCCCEEEEEEEEEEECHHHHHHHCCC-C-CC--CCCCCCCEEECCCCCCCCCCCCC---------CCCCCCEEEECCCC
T ss_conf 999798999999997188999997899-9-98--77783160541023445689888---------74888853053013
Q ss_pred CCEEEECCCCEEEEEEHHHEE
Q ss_conf 608897699779998530178
Q gi|254780848|r 81 GTEIKLNDGEEYLVMQESDIM 101 (111)
Q Consensus 81 g~~v~~~dg~~y~i~~e~dIl 101 (111)
. .--.+|..+.+..+.
T Consensus 92 ~-----G~~~~~~~~~~~~~~ 107 (325)
T 3jyn_A 92 L-----GAYSEVHVLPEANLV 107 (325)
T ss_dssp S-----CCSBSEEEEEGGGEE
T ss_pred C-----CCCCCCEECCHHHCC
T ss_conf 5-----764331112288750
Done!