HHsearch alignment for GI: 254780849 and conserved domain: TIGR02342
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit; InterPro: IPR012717 Members of this eukaryotic family are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=100.00 E-value=0 Score=756.50 Aligned_cols=465 Identities=20% Similarity=0.290 Sum_probs=398.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 89999999999999999773678986359888589983883208887776034785225788999999986625518866
Q gi|254780849|r 10 TAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNTEDSSGDGT 89 (551)
Q Consensus 10 ~~a~~~~~~~~~~ia~~i~ttlGP~G~~kmi~~~~g~~~iTnDGaTIlk~l~~~hp~~~~~akll~~~a~~qd~~~GDGT 89 (551)
T Consensus 8 ~~vR~snI~AAkaVADaiRtSLGP~GMDKmI~~~~G~v~ItNDGaTIL~qm~v~HP----~AkmLVe~S~AQDieAGDGT 83 (526)
T TIGR02342 8 EDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQDGKGEVIITNDGATILKQMEVLHP----AAKMLVELSKAQDIEAGDGT 83 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCH----HHHHHHHHHHHCCCCCCCCC
T ss_conf 67778989999887456530677866420212899747986382778865223063----78999997554043458874
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHH------
Q ss_conf 67999999999999999976988999999898644777767653222127--------6024222122555334------
Q gi|254780849|r 90 TTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVVEYLKANHKKVG--------SREEIIQVATISANGD------ 155 (551)
Q Consensus 90 TtvvvLa~eLL~~a~~Li~~gihP~~Ii~G~~~a~~~al~~L~~~s~~i~--------~~~~L~~vA~tS~~~~------ 155 (551)
T Consensus 84 TsVvi~AGALL~A~~~LL~~giHP~~isesf~~A~~~a~~iL~~~~~~v~l~~~f~~~dre~L~~~a~TsL~SKvvSq~S 163 (526)
T TIGR02342 84 TSVVILAGALLDACEKLLEKGIHPTIISESFQSAADEAIKILDEMSIPVDLSETFTEQDRELLIKSATTSLSSKVVSQYS 163 (526)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00243552799999999726897216888999999999999997332123311222445899999977665345666415
Q ss_pred HHHHHHHHHHHHHC---------CCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCC
Q ss_conf 56888999999842---------432000110146552033330232001122476542331013444113102201356
Q gi|254780849|r 156 REIGEKIAYAMEQI---------GPHGIITIDQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKK 226 (551)
Q Consensus 156 ~~l~~li~~A~~~i---------~~d~vi~i~~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Ili~d~~ 226 (551)
T Consensus 164 ~~LaP~AvdAVlkv~d~~~~~~vdL~dIkvvkk~GGtidd~ELi~G~v~~q~~~~------~~Gg~~ri~~AKIgLIQF~ 237 (526)
T TIGR02342 164 SLLAPLAVDAVLKVIDPENDKNVDLKDIKVVKKLGGTIDDTELIEGLVLTQKASK------SAGGPTRIEKAKIGLIQFQ 237 (526)
T ss_pred HHHCHHHHHHHHEECCCCCCCCCCCHHCEEEEECCCEEECCCEECCEECCCCHHH------HCCCCCHHHHCCEEEEEEE
T ss_conf 3412143540101016754454420000576422881201110134130550100------0477421432362322110
Q ss_pred CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHH--------------------HHHH
Q ss_conf 44100111467753111621222223335888865312135683232222123056--------------------7669
Q gi|254780849|r 227 ISALQPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFG--------------------DRRK 286 (551)
Q Consensus 227 Le~~~~~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~--------------------~~~~ 286 (551)
T Consensus 238 lS~PKtd~en~vi~~DY~qMDrvl--kEeR~Yil~~~~~I~k~gcNVlLiQKSiLRDA~ndlaLHfL~K~~I~vvKDIeR 315 (526)
T TIGR02342 238 LSPPKTDMENQVIVNDYAQMDRVL--KEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIER 315 (526)
T ss_pred CCCCCCCCCCHHEEHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 584489877411002178876998--998999999999998528977862145687688789999984288179860561
Q ss_pred HHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEE-EC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 988652110112332101063221122222441027898-04-6730137742177776543346776541356311110
Q gi|254780849|r 287 EVLRDIAAVVGATVISEEIGLKLEKATIADLGSAKKVVM-SK-DDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDK 364 (551)
Q Consensus 287 ~~L~dia~~tGa~vi~~~~~~~l~~~~~~~LG~~~~v~i-~~-~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~ 364 (551)
T Consensus 316 e~veF~~k~lGc~PiA-----~id~f~~d~LG~A~lvEev~~~~~~k~~kitG--------------------------- 363 (526)
T TIGR02342 316 EEVEFISKTLGCKPIA-----SIDHFTADKLGKAELVEEVKTSDDSKIIKITG--------------------------- 363 (526)
T ss_pred CCHHHHHHHCCCCCEE-----CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEC---------------------------
T ss_conf 3145564321884020-----21144820068741145322389813899852---------------------------
Q ss_pred HHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCCC--CHHHHHHH
Q ss_conf 12221023--34432125676531468989887788999987540278-105553799999999745089--96899999
Q gi|254780849|r 365 LKERLAKL--AGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEG-IVPGGGIALVRAAQALSVKGD--NEDQCAGI 439 (551)
Q Consensus 365 ~~er~~~l--~g~~~tI~vgg~t~~~~~E~~r~~~DAl~v~~~~~~~~-vvpGGGa~e~~ls~~l~~~~~--~~~~~~~i 439 (551)
T Consensus 364 -----~~~~~~~~tV~v~~RGSN~Lvi~EAeRSlHDALCViRsLVk~r~L~~GGGaPE~E~a~~L~~~a~~~~G~~~~~~ 438 (526)
T TIGR02342 364 -----VQNNNAGKTVTVLVRGSNKLVIDEAERSLHDALCVIRSLVKKRALIAGGGAPEIEIALKLSKLARTLKGVESYCV 438 (526)
T ss_pred -----CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf -----246888862789980686022423322156789999988750651388695289999999986654132588899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC---EEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999977999899999998168986---65886687272138839837047899999999999998660
Q gi|254780849|r 440 EIVRKALSYPCRQIIKNAGDESELIVSKIQESKTAN---YGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLI 516 (551)
Q Consensus 440 ~~fa~AL~~ip~~La~NaG~d~~~~i~~l~~~~~~~---~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iLr 516 (551)
T Consensus 439 r~FAdAleviP~TLAENAGL~pi~~VTeLR~~H~~G~~~~Gi~Vrkg~~~~~~eE~vlQP~LV~~SA~tlAsE~Vr~iLk 518 (526)
T TIGR02342 439 RAFADALEVIPYTLAENAGLNPIKVVTELRNRHANGEKTAGISVRKGGITDMLEEEVLQPLLVTTSAVTLASETVRSILK 518 (526)
T ss_pred HHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98864631010134454067725799987875207874476457625644553131006403446677777789898875
Q ss_pred HHHHHHC
Q ss_conf 9999715
Q gi|254780849|r 517 TEAVVVD 523 (551)
Q Consensus 517 iD~iI~~ 523 (551)
T Consensus 519 iDDiv~~ 525 (526)
T TIGR02342 519 IDDIVFT 525 (526)
T ss_pred HHHHHHC
T ss_conf 6434206