>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.

Probab=99.94 E-value=7.8e-27 Score=195.17 Aligned_cols=197 Identities=34% Similarity=0.466 Sum_probs=153.4 Q ss_pred CHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCCC------CHHHHCCC-CCCCCHHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 0242221225553-----3456888999999842432------00011014-6552033330232001122476542331 Q gi|254780849|r 141 REEIIQVATISAN-----GDREIGEKIAYAMEQIGPH------GIITIDQA-KTATTEVRVVQGMQIDRGYISPYFVTST 208 (551) Q Consensus 141 ~~~L~~vA~tS~~-----~~~~l~~li~~A~~~i~~d------~vi~i~~~-~~~~~d~~li~G~~id~g~~~~~fi~~~ 208 (551) T Consensus 1 ~~~l~~va~tal~sK~~~~~~~l~~lvv~A~~~v~~~~~~~~~~~I~I~k~~Ggs~~ds~li~Gi~~~k~~~~~------ 74 (209) T cd03333 1 RELLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASP------ 74 (209) T ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCC------ T ss_conf 97799999987552310308899999999999860556778888389998369982024999648994356789------ Q ss_pred HHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHH Q ss_conf 01344411310220135644100111467753111621222223335888865312135683232222123056766998 Q gi|254780849|r 209 ERMTAEVENPYILIYDKKISALQPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEV 288 (551) Q Consensus 209 ~~~~~~~~n~~Ili~d~~Le~~~~~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~~~~~~~ 288 (551) T Consensus 75 -~m~~~~~n~kIli~~~~le~-----------------vii~~~~I~~~a~~~l~~~------~I~~v~~-----~~~~~ 125 (209) T cd03333 75 -YMPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVRR-----VKKED 125 (209) T ss_pred -CCCEECCCCEEEEECCCCCE-----------------EEEECCCCCHHHHHHHHHC------CCEEEEE-----CCHHH T ss_conf -98416147469998588219-----------------9998887679999999985------9699994-----24888 Q ss_pred HHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH Q ss_conf 86521101123321010632211222224410278980467301377421777765433467765413563111101222 Q gi|254780849|r 289 LRDIAAVVGATVISEEIGLKLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKER 368 (551) Q Consensus 289 L~dia~~tGa~vi~~~~~~~l~~~~~~~LG~~~~v~i~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~~~er 368 (551) T Consensus 126 l~~ia~~tGa~ii~~-----~~~~~~~~lG~~~~v~~~~~~~------------------------------~~~~~~~~ 170 (209) T cd03333 126 LERIARATGATIVSS-----LEDLTPEDLGTAELVEETKIGE------------------------------EKLTFIEG 170 (209) T ss_pred HHHHHHHHCCEEECC-----HHHCCHHHCCEEEEEEEEEECC------------------------------EEEEEEEE T ss_conf 899999729999823-----2129987898107999999888------------------------------48999995 Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 10233443212567653146898988778899998754027 Q gi|254780849|r 369 LAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDE 409 (551) Q Consensus 369 ~~~l~g~~~tI~vgg~t~~~~~E~~r~~~DAl~v~~~~~~~ 409 (551) T Consensus 171 ~~--~~~~~TI~lrG~t~~~l~E~~r~l~Dal~vv~~ai~e 209 (209) T cd03333 171 CK--GGKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209) T ss_pred CC--CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 68--9998999987999899999999999999999999539

HHsearch alignment for GI: 254780849 and conserved domain: cd03333