HHsearch alignment for GI: 254780849 and conserved domain: cd03334
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.85 E-value=8.3e-22 Score=162.03 Aligned_cols=211 Identities=17% Similarity=0.154 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHCCCC----------CHHHHC-CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf 33456888999999842432----------000110-1465520333302320011224765423310134441131022
Q gi|254780849|r 153 NGDREIGEKIAYAMEQIGPH----------GIITID-QAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYIL 221 (551)
Q Consensus 153 ~~~~~l~~li~~A~~~i~~d----------~vi~i~-~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Il 221 (551)
T Consensus 18 ~W~d~l~~l~~~a~~~v~~~~~~g~~~di~~yVkI~ki~GG~~~dS~lv~Gvv~~K~~~h~-------~Mp~~i~npkIl 90 (261)
T cd03334 18 SWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDSEVVDGVVFTKNVAHK-------RMPSKIKNPRIL 90 (261)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEEEEECCCCHHHCEEEEEEEEECCCCCC-------CCCCCCCCCEEE
T ss_conf 6999999999999985250657997326326079999379897775788759982777886-------798725586599
Q ss_pred HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHH----------------
Q ss_conf 0135644100111467753111621222223335888865312135683232222123056766----------------
Q gi|254780849|r 222 IYDKKISALQPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRR---------------- 285 (551)
Q Consensus 222 i~d~~Le~~~~~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~~~~---------------- 285 (551)
T Consensus 91 ll~~~Le~~k~e~~~~----~~-~~~--~--~qE~~~l~~~v~~I~~~g~nVVl~~k-~I~d~A~~~l~k~gI~~vr~vk 160 (261)
T cd03334 91 LLQGPLEYQRVENKLL----SL-DPV--I--LQEKEYLKNLVSRIVALRPDVILVEK-SVSRIAQDLLLEAGITLVLNVK 160 (261)
T ss_pred EEECCCCCCCCCCCHH----HH-HHH--H--HHHHHHHHHHHHHHHHHCCCEEEECC-CCCHHHHHHHHHCCCEEEECCC
T ss_conf 9805424441434453----09-999--9--99999999999999960999999889-7798999999987996890389
Q ss_pred HHHHHHHHHHCCCCCCCHHHCCCCCC-CCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99886521101123321010632211-22222441027898046730137742177776543346776541356311110
Q gi|254780849|r 286 KEVLRDIAAVVGATVISEEIGLKLEK-ATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDK 364 (551)
Q Consensus 286 ~~~L~dia~~tGa~vi~~~~~~~l~~-~~~~~LG~~~~v~i~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~ 364 (551)
T Consensus 161 ~~dl~rlar~tGa~iv~s-----~d~l~~~~~LG~c~~f~v~~i~~e-------------------------~~~~Kt~~ 210 (261)
T cd03334 161 PSVLERISRCTGADIISS-----MDDLLTSPKLGTCESFRVRTYVEE-------------------------HGRSKTLM 210 (261)
T ss_pred HHHHHHHHHHHCCEEECC-----HHHCCCCCCCCEEEEEEEEEEECC-------------------------CCCCEEEE
T ss_conf 999999999869903346-----777468653845126999999525-------------------------77733699
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCC
Q ss_conf 122210233443212567653146898988778899998754-027810
Q gi|254780849|r 365 LKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAA-SDEGIV 412 (551)
Q Consensus 365 ~~er~~~l~g~~~tI~vgg~t~~~~~E~~r~~~DAl~v~~~~-~~~~vv 412 (551)
T Consensus 211 ~~egc~-~~-~~~TIlLRG~~~~~L~evkR~l~dal~vv~nl~lE~~~l 257 (261)
T cd03334 211 FFEGCP-KE-LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLETSFL 257 (261)
T ss_pred EEECCC-CC-CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 996789-98-677999987988799999999999999999999889875