>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.

Probab=100.00 E-value=0 Score=701.06 Aligned_cols=440 Identities=22% Similarity=0.338 Sum_probs=366.7 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC Q ss_conf 79899999999999999997736789863598885899838832088877760347852257889999999866255188 Q gi|254780849|r 8 LGTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNTEDSSGD 87 (551) Q Consensus 8 ~g~~a~~~~~~~~~~ia~~i~ttlGP~G~~kmi~~~~g~~~iTnDGaTIlk~l~~~hp~~~~~akll~~~a~~qd~~~GD 87 (551) T Consensus 13 ~G~~a~~~ni~a~~~lad~vktTLGPkG~~k~i~~~~G~~~ITnDG~TIlk~i~l~~P----~a~ll~~~a~~qd~~~GD 88 (480) T cd03337 13 SGRKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHP----AAKSMIELSRTQDEEVGD 88 (480) T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCCH----HHHHHHHHHHHHHHHHCC T ss_conf 4499999999999999999747659897828998899984796469999986547597----999999999965766268 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHH------HHHH Q ss_conf 6667999999999999999976988999999898644777767653222127--6024222122555334------5688 Q gi|254780849|r 88 GTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVVEYLKANHKKVG--SREEIIQVATISANGD------REIG 159 (551) Q Consensus 88 GTTtvvvLa~eLL~~a~~Li~~gihP~~Ii~G~~~a~~~al~~L~~~s~~i~--~~~~L~~vA~tS~~~~------~~l~ 159 (551) T Consensus 89 GTTt~vvLa~~ll~~~~~li~~g~~p~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~~~l~~~i~t~~~~k~~~~~~~~~~ 168 (480) T cd03337 89 GTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMC 168 (480) T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH T ss_conf 58899999999999999999869980889999999999999999974427786569999999998444124466999999 Q ss_pred HHHHHHHHHCCCCC-----------HHHH-CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCC Q ss_conf 89999998424320-----------0011-01465520333302320011224765423310134441131022013564 Q gi|254780849|r 160 EKIAYAMEQIGPHG-----------IITI-DQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKI 227 (551) Q Consensus 160 ~li~~A~~~i~~d~-----------vi~i-~~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Ili~d~~L 227 (551) T Consensus 169 ~l~~~av~~v~~~~~~~~~~id~~~~i~i~ki~gg~~~ds~~~~G~i~~k~~~~~-------~m~~~i~n~~ill~~~~L 241 (480) T cd03337 169 NLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPL 241 (480) T ss_pred HHHHHHHEEEECCCCCCCEEEEHHCCEEEEEECCCCCCCCEEEEEEEECCCCCCC-------CCCHHCCCCEEEEECCCC T ss_conf 9999862576316887631321000458998237500000234017971666775-------330110575389971774 Q ss_pred CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCC Q ss_conf 41001114677531116212222233358888653121356832322221230567669988652110112332101063 Q gi|254780849|r 228 SALQPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLRDIAAVVGATVISEEIGL 307 (551) Q Consensus 228 e~~~~~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~~~~~~~L~dia~~tGa~vi~~~~~~ 307 (551) T Consensus 242 e~-----------------lvi~~k~i~~~a~~~l~~~----~--i~~~~-----~~~~~dl~~ia~~tga~ii~~---- 289 (480) T cd03337 242 EY-----------------LVITEKGVSDLAQHYLVKA----G--ITALR-----RVRKTDNNRIARACGATIVNR---- 289 (480) T ss_pred CE-----------------EEECCCCCHHHHHHHHHHC----C--CEEEE-----EECHHHHHHHHHHCCCEEECC---- T ss_conf 01-----------------4550467548899999976----9--73897-----412877999998539888465---- Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH Q ss_conf 22112222244102789804673013774217777654334677654135631111012221023344321256765314 Q gi|254780849|r 308 KLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEA 387 (551) Q Consensus 308 ~l~~~~~~~LG~~~~v~i~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~~~er~~~l~g~~~tI~vgg~t~~ 387 (551) T Consensus 290 -~~~~~~~~lG~~~~~~~~~~----~~---~----------------------~~~~~~~~-~~-~~~~~tIlirG~t~~ 337 (480) T cd03337 290 -PEELTESDVGTGAGLFEVKK----IG---D----------------------EYFTFITE-CK-DPKACTILLRGASKD 337 (480) T ss_pred -HHHCCHHHCCCCCCEEEEEE----EC---C----------------------EEEEEEEC-CC-CCCEEEEEECCCCHH T ss_conf -31098877200250699999----44---5----------------------58999963-67-762489997167788 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH Q ss_conf 68989887788999987540278-105553799999999745089--968999999999999999999999779998999 Q gi|254780849|r 388 ALGEKKDRYQDSLDATRAASDEG-IVPGGGIALVRAAQALSVKGD--NEDQCAGIEIVRKALSYPCRQIIKNAGDESELI 464 (551) Q Consensus 388 ~~~E~~r~~~DAl~v~~~~~~~~-vvpGGGa~e~~ls~~l~~~~~--~~~~~~~i~~fa~AL~~ip~~La~NaG~d~~~~ 464 (551) T Consensus 338 ~l~E~~r~l~DAl~a~k~a~~e~~iVpGGG~~e~~ls~~L~~~~~~~~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v 417 (480) T cd03337 338 VLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQWPYKAVASALEVIPRTLAQNCGANVIRT 417 (480) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH T ss_conf 99999999999999999996389988364499998899999873247717899999999999989999999779959999 Q ss_pred HHHHHHCC----CCCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99998168----98665886687272138839837047899999999999998660999971 Q gi|254780849|r 465 VSKIQESK----TANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVV 522 (551) Q Consensus 465 i~~l~~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iLriD~iI~ 522 (551) T Consensus 418 l~~L~~~~~~~~~~~~Gid~~~g~~~dm~~~gIiDP~~vk~~al~~A~~va~~iL~iD~iIs 479 (480) T cd03337 418 LTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480) T ss_pred HHHHHHHHHCCCCCCEEEECCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999998557898576967899170677587834699999999979999999998778635

HHsearch alignment for GI: 254780849 and conserved domain: cd03337