HHsearch alignment for GI: 254780849 and conserved domain: pfam00118

>pfam00118 Cpn60_TCP1 TCP-1/cpn60 chaperonin family. This family includes members from the HSP60 chaperone family and the TCP-1 (T-complex protein) family.
Probab=100.00  E-value=0  Score=712.57  Aligned_cols=441  Identities=35%  Similarity=0.523  Sum_probs=390.8

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             99997736789863598885899838832088877760347852257889999999866255188666799999999999
Q gi|254780849|r   23 LAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNTEDSSGDGTTTATCLAQAIYNE  102 (551)
Q Consensus        23 ia~~i~ttlGP~G~~kmi~~~~g~~~iTnDGaTIlk~l~~~hp~~~~~akll~~~a~~qd~~~GDGTTtvvvLa~eLL~~  102 (551)
T Consensus         1 ia~~vkstlGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hP----~a~ll~~~a~~~~~~~GDGTTt~vvL~~~Ll~~   76 (481)
T pfam00118         1 LADAVKTTLGPKGRNKMLVNHGGKITITNDGATILKEIEIQHP----AAKLLVEAAKSQDEEVGDGTTTAVVLAGELLEE   76 (481)
T ss_pred             CCHHHCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHCCCCCH----HHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHH
T ss_conf             9124227739887859998799996897769999986768697----999999999964144258877999999999999


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHH------HHHHHHHHHHHHHC----CC
Q ss_conf             99999769889999998986447777676532221276-024222122555334------56888999999842----43
Q gi|254780849|r  103 GRKYVTAGLNPMDIKRGIDLAVQEVVEYLKANHKKVGS-REEIIQVATISANGD------REIGEKIAYAMEQI----GP  171 (551)
Q Consensus       103 a~~Li~~gihP~~Ii~G~~~a~~~al~~L~~~s~~i~~-~~~L~~vA~tS~~~~------~~l~~li~~A~~~i----~~  171 (551)
T Consensus        77 ~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~l~~va~ts~~~k~~~~~~~~l~~l~~~A~~~~~~~~~~  156 (481)
T pfam00118        77 AEKLIEAGIHPTDIIRGYELALEIALKALEELSIPVSDDDEDLLNVARTSLNSKISSRESELLGKLVVDAVLLIIEKFDV  156 (481)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999779989999999999999999999984641899999999999998447742035899999999999973024667


Q ss_pred             CCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCC-------------------
Q ss_conf             2000110146552033330232001122476542331013444113102201356441001-------------------
Q gi|254780849|r  172 HGIITIDQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISALQP-------------------  232 (551)
Q Consensus       172 d~vi~i~~~~~~~~d~~li~G~~id~g~~~~~fi~~~~~~~~~~~n~~Ili~d~~Le~~~~-------------------  232 (551)
T Consensus       157 ~~i~ii~i~gg~~~~s~li~Gi~i~~~~~~~-------~~~~~~~n~kIll~d~~l~~~~~~~~~~~~~~~~~~~~~~E~  229 (481)
T pfam00118       157 GNIGVIKIEGGSLEDSELIEGIVLDKGYLSP-------DMPKRLENPKILLLDCPLEYEKTEKVIISTAEELERLLEAEE  229 (481)
T ss_pred             CCCEEEEECCCCCCCEEEEEEEEEECCCCCC-------CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHH
T ss_conf             7720799637875441897008984476799-------886424674799987756766554552178458899999999


Q ss_pred             --CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC
Q ss_conf             --114677531116212222233358888653121356832322221230567669988652110112332101063221
Q gi|254780849|r  233 --LLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLRDIAAVVGATVISEEIGLKLE  310 (551)
Q Consensus       233 --~~~~le~~~~~~~~l~ii~~~~e~~~l~~lv~n~~k~gi~v~~vk~~~~~~~~~~~L~dia~~tGa~vi~~~~~~~l~  310 (551)
T Consensus       230 ~~i~~~l~~i~~~~~~lvi~~~~I~~~al~~l~~~~I~-----------~~~~v~~~~Le~ia~~tGa~~i~~-----~~  293 (481)
T pfam00118       230 KQLLPLLEKIVDAGVNLVIIQKGIDDLALHFLAKNGIL-----------ALRRVKKEDLERLAKATGATVVSS-----LD  293 (481)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH-----------HHHCCCHHHHHHHHHHHCCEEECC-----CC
T ss_conf             99999999999809899999488677999999996556-----------663424889999999829988456-----35


Q ss_pred             CCCCCCCCCEEEEEE---ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf             122222441027898---04673013774217777654334677654135631111012221023344321256765314
Q gi|254780849|r  311 KATIADLGSAKKVVM---SKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEA  387 (551)
Q Consensus       311 ~~~~~~LG~~~~v~i---~~~~~~ii~~~~~~~~i~~~i~~l~~~ie~~~~~~~~~~~~er~~~l~g~~~tI~vgg~t~~  387 (551)
T Consensus       294 ~l~~~~lG~~~~v~~~~i~~~~~~~i~-----------------------------------~~~~~~~~tI~i~g~t~~  338 (481)
T pfam00118       294 DLEPDELGSAGKVEEREIGEDKTTFIE-----------------------------------GCLSGKVATILLRGATDH  338 (481)
T ss_pred             CCCHHHCCCCCEEEEEEECCEEEEEEE-----------------------------------CCCCCCEEEEEECCCCHH
T ss_conf             499887835760599998781599995-----------------------------------157897699995689899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             689898877889999875402-78105553799999999745089--968999999999999999999999779998999
Q gi|254780849|r  388 ALGEKKDRYQDSLDATRAASD-EGIVPGGGIALVRAAQALSVKGD--NEDQCAGIEIVRKALSYPCRQIIKNAGDESELI  464 (551)
Q Consensus       388 ~~~E~~r~~~DAl~v~~~~~~-~~vvpGGGa~e~~ls~~l~~~~~--~~~~~~~i~~fa~AL~~ip~~La~NaG~d~~~~  464 (551)
T Consensus       339 ~~~E~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~~~Al~~ip~~L~~NaG~d~~~~  418 (481)
T pfam00118       339 ELDELERAIEDALNAVKAALKDEGVVPGGGAAELELSRALREYAKSVSGKEQLGIEAFAEALEVIPRTLAENAGLDPIEV  418 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             99999999999999999997488724587389999999999986037848999999999999999999999779988999


Q ss_pred             HHHHHHCC--CCCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99998168--98665886687272138839837047899999999999998660999971587
Q gi|254780849|r  465 VSKIQESK--TANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVVDAP  525 (551)
Q Consensus       465 i~~l~~~~--~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~iLriD~iI~~~~  525 (551)
T Consensus       419 i~~l~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~iI~~~~  481 (481)
T pfam00118       419 LAKLKAAHKKGNNLGIDADTGEIGDMKEAGIIDPLKVKRSALKSAVEVASLILTIDQIIKAKP  481 (481)
T ss_pred             HHHHHHHHCCCCCEEEECCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999850799677974899071267674852799999999999999999999999996296