PSIBLAST alignment of GI: 254780849 and protein with PDB id: 1j4z
>gi|39654074|pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The Bacterial Chaperonin Groel; See Remark 400 Length = 547
>gi|39654075|pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The Bacterial Chaperonin Groel; See Remark 400 Length = 547
Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 284/531 (53%), Positives = 384/531 (72%), Gaps = 2/531 (0%)
Query: 2 AAKDIKLGTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSIS 61
AAKD+K G AR + GVN LA+AVK TLGPKGR V++ SFGAP +TKDGV+VA+ I
Sbjct: 1 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIE 60
Query: 62 FKNHFHEVGARMIRDVATNTEDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGID 121
++ F +GA+M+++VA+ D++GDGTTTAT LAQAI EG K V AG+NPMD+KRGID
Sbjct: 61 LEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGID 120
Query: 122 LAVQEVVEYLKANHKKVGSREEIIQVATISANGDREIGEKIAYAMEQIGPHGIITIDQAK 181
AV VE LKA + I QV TISAN D +G+ IA AM+++G G+IT++
Sbjct: 121 KAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGT 180
Query: 182 TATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISALQPLLPILESAT 241
E+ VV+GMQ DRGY+SPYF+ E E+E+P+IL+ DKKIS ++ +LP+LE+
Sbjct: 181 GLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA 240
Query: 242 QSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLRDIAAVVGATVI 301
++G+PL IIAEDVEG+ALATLVVN +R + V AVKAP FGDRRK +L+DIA + G TVI
Sbjct: 241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVI 300
Query: 302 SEEIGLKLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQKAIEDTKSDYD 361
SEEIG++LEKAT+ DLG AK+VV++KD TTI+ G G I+GR+ +I++ IE+ SDYD
Sbjct: 301 SEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYD 360
Query: 362 RDKLKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEGIVPGGGIALVR 421
R+KL+ER+AKLAGGVAV++VG TE + EKK R + +L ATRAA +EG+V GGG+AL+R
Sbjct: 361 REKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEAALHATRAAVEEGVVAGGGVALIR 420
Query: 422 AAQAL-SVKGDNEDQCAGIEIVRKALSYPCRQIIKNAGDESELIVSKIQESKTANYGYNA 480
A L ++G N DQ GI++ +A+ P RQI+ N G+E ++ + ++ NYGYNA
Sbjct: 421 VASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVK-GGDGNYGYNA 479
Query: 481 QKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVVDAPKDETAS 531
+G+M +MGI+DP KV R+ALQ A S+AG+M+ TE +V D PK++ A
Sbjct: 480 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAAD 530