PSIBLAST alignment of GI: 254780849 and protein with PDB id: 1q2v
>gi|42543350|pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548
>gi|42543351|pdb|1Q2V|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548
Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats.
Identities = 106/540 (19%), Positives = 199/540 (36%), Gaps = 59/540 (10%)
Query: 9 GTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHE 68
G A+ +AE V+ TLGPKG ++ +S G VT D T+ I ++
Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHP--- 77
Query: 69 VGARMIRDVATNTEDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVV 128
A+M+ +VA + +GDGTTTA +A + + + + ++P I +G LA ++
Sbjct: 78 -AAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQ 136
Query: 129 EYLKANHKKVGSREEIIQVATISANGDREIGEKIAYAMEQ------------------IG 170
E L +V +E + + + + E + + +
Sbjct: 137 EILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVD 196
Query: 171 PHGIITIDQAKTATTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISAL 230
I +A E +V+G+ ID+ + P E + N + + + A
Sbjct: 197 LDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDA- 255
Query: 231 QPLLPILESATQSGRPLCIIAEDVEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKEVLR 290
+ + + E L +V + + G V+ V+ D + L
Sbjct: 256 --------KINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGI-DDLAQHYLA 306
Query: 291 DIAAVVGATVISEEIGLKLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQ 350
+ V ++ +A AK V KD T G
Sbjct: 307 KYGIMAVRRVKKSDM------EKLAKATGAKIVTNVKDLTPEDLG-------------YA 347
Query: 351 KAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEG 410
+ +E+ K + E ++ G TE + E + +D++ + ++G
Sbjct: 348 EVVEERKLAGENMIFVEGCKNPKAVTILIRGG--TEHVIDEVERALEDAVKVVKDVMEDG 405
Query: 411 -IVPGGGIALVRAAQALSVKGD--NEDQCAGIEIVRKALSYPCRQIIKNAGDESELIVSK 467
++P GG + A L + IE AL + + +NAG ++ ++ K
Sbjct: 406 AVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVK 465
Query: 468 IQESKTA---NYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLITEAVVVDA 524
+ G + + DM E GII+P++V + A++SA A M+L + V+
Sbjct: 466 VISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525