RPSBLAST alignment for GI: 254780849 and conserved domain: cd03340

>gnl|CDD|48157 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.. Length = 522
 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 404 RAASDEGIVPGGG---IALVRAAQALSVKGDNEDQCAGIEIVRKALSYPCRQIIKNAGDE 460
           RA  ++ +V GGG   + L +  +  S     + Q   I    KAL    RQ+  NAG +
Sbjct: 394 RAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQLV-INAFAKALEIIPRQLCDNAGFD 452

Query: 461 SELIVSKIQ----ESKTANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMML 515
           +  I++K++    +     YG +       D FE  + +P  V  NAL +A   A ++L
Sbjct: 453 ATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLIL 511