RPSBLAST alignment for GI: 254780849 and conserved domain: cd03343
>gnl|CDD|48160 cd03343, cpn60, cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.. Length = 517
Score = 97.2 bits (242), Expect = 9e-21
Identities = 128/534 (23%), Positives = 216/534 (40%), Gaps = 91/534 (17%)
Query: 22 TLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFKNHFHEVGARMIRDVATNT 81
+AEAV+ TLGPKG ++ +S G +T DG T+ K + ++ A+M+ +VA
Sbjct: 26 AVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHP----AAKMLVEVAKTQ 81
Query: 82 EDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLAVQEVVEYLKANHKKVG-- 139
++ GDGTTTA LA + + + ++P I G LA ++ +E L KV
Sbjct: 82 DEEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPD 141
Query: 140 SREEIIQVATISANG-----DREIGEKIAY-----AMEQIGPHGIITIDQAKT------A 183
++ + ++A S G ++ + E+ ++ +D K +
Sbjct: 142 DKDTLRKIAKTSLTGKGAEAAKDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGS 201
Query: 184 TTEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKISALQPLLPI---LESA 240
+ +++G+ ID+ + P M VEN I + D + + + + S
Sbjct: 202 VDDTELIRGIVIDKEVVHP-------GMPKRVENAKIALLDAPLEVKKTEIDAKIRITSP 254
Query: 241 TQSGRPLCIIAEDVEG--DALATLVVNRVRC--GLPVLA----VKAPAFGDRR--KEVLR 290
Q L ++ D +A N V C G+ LA KA RR K +
Sbjct: 255 DQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKAGILAVRRVKKSDME 314
Query: 291 DIAAVVGATVISEEIGLKLEKATIADLGSAKKVVMSKDDTTIVGGNGPSERIEGRINEIQ 350
+A GA +++ ++ T DLG A+ V
Sbjct: 315 KLARATGAKIVT-----NIDDLTPEDLGEAELV--------------------------- 342
Query: 351 KAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDATRAASDEG 410
+ + D + K V +L G TE + E + +D+L A ++G
Sbjct: 343 ----EERKVGDDKMVFVEGCKNPKAVTILLRGG-TEHVVDELERALEDALRVVADALEDG 397
Query: 411 -IVPGGGIALVRAAQAL-----SVKGDNEDQCAGIEIVRKALSYPCRQIIKNAG-DESEL 463
+V GGG + A+ L SV G +Q A +E AL R + +NAG D +
Sbjct: 398 KVVAGGGAVEIELAKRLREYARSVGG--REQLA-VEAFADALEEIPRTLAENAGLDPIDT 454
Query: 464 IVS--KIQESKTANYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMML 515
+V E N G + DM E G+I+P++V + A++SA A M+L
Sbjct: 455 LVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEAATMIL 508