RPSBLAST alignment for GI: 254780849 and conserved domain: cd00309
>gnl|CDD|73189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.. Length = 464
Score = 333 bits (856), Expect = 8e-92
Identities = 171/545 (31%), Positives = 253/545 (46%), Gaps = 107/545 (19%)
Query: 4 KDIKLGTAARDAIAYGVNTLAEAVKCTLGPKGRCVIIGNSFGAPRVTKDGVTVAKSISFK 63
K+ + G AR + LA+AVK TLGPKG ++ +S G P +T DG T+ K I +
Sbjct: 1 KEREFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVE 60
Query: 64 NHFHEVGARMIRDVATNTEDSSGDGTTTATCLAQAIYNEGRKYVTAGLNPMDIKRGIDLA 123
+ A+++ +VA + +D GDGTTT LA + E K + AG++P +I RG + A
Sbjct: 61 H----PAAKLLVEVAKSQDDEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKA 116
Query: 124 VQEVVEYLK--ANHKKVGSREEIIQVATISAN------GDREIGEKIAYAMEQIGP---- 171
V++ +E LK A V REE+++VAT S N GD +GE + A+ ++G
Sbjct: 117 VEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGGDDFLGELVVDAVLKVGKENGD 176
Query: 172 --HGIITIDQAKTAT-TEVRVVQGMQIDRGYISPYFVTSTERMTAEVENPYILIYDKKIS 228
G+I +++ K + + +V GM D+GY+SPY M +EN IL+ D K+
Sbjct: 177 VDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSPY-------MPKRLENAKILLLDCKLE 229
Query: 229 ALQPLLPILESATQSGRPLCIIAED-VEGDALATLVVNRVRCGLPVLAVKAPAFGDRRKE 287
+ +IAE ++ +AL L ++AV+ RKE
Sbjct: 230 YV------------------VIAEKGIDDEALHYLAKLG------IMAVRR-----VRKE 260
Query: 288 VLRDIAAVVGATVISEEIGLKLEKATIADLGSAKKVVMSK----DDTTIVGGNGPSERIE 343
L IA GAT++S LE T DLG+A V +K T I G G
Sbjct: 261 DLERIAKATGATIVSR-----LEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG------ 309
Query: 344 GRINEIQKAIEDTKSDYDRDKLKERLAKLAGGVAVLEVGDVTEAALGEKKDRYQDSLDAT 403
G VA + + TE L E + D+L A
Sbjct: 310 ------------------------------GKVATILLRGATEVELDEAERSLHDALCAV 339
Query: 404 RAA-SDEGIVPGGGIALVRAAQALS--VKGDNEDQCAGIEIVRKALSYPCRQIIKNAGDE 460
RAA D GIVPGGG A + ++AL K + GIE AL R + +NAG +
Sbjct: 340 RAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQLGIEAFADALEVIPRTLAENAGLD 399
Query: 461 SELIVSKIQESKTA---NYGYNAQKSVFGDMFEMGIIDPVKVVRNALQSAGSLAGMMLIT 517
+V+K++ N G + + DM E GIIDP+KV R AL+SA A ++L
Sbjct: 400 PIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTI 459
Query: 518 EAVVV 522
+ ++V
Sbjct: 460 DDIIV 464