HHsearch alignment for GI: 254780852 and conserved domain: MTH00018
>MTH00018 ND3 NADH dehydrogenase subunit 3; Validated.
Probab=100.00 E-value=0 Score=264.83 Aligned_cols=115 Identities=44% Similarity=0.930 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 37999999999999999999999971567898324174443130004347665247999999999987599999799999
Q gi|254780852|r 7 SYAPILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVY 86 (121)
Q Consensus 7 ~y~~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~ 86 (121)
T Consensus 2 ey~~i~i~l~~~~~l~~~~~~~s~~l~~~~~~~eK~spyECGf~p~~~ar~~Fsv~FyliailFliFDvEi~~l~Pwav~ 81 (116)
T MTH00018 2 EFYGLFILLIFSVVLSALFSGASYFLGEKQPDREKVSAYECGFDPFGFPGRPFSVRFFLIGILFLIFDLEISFLFPWCVL 81 (116)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77999999999999999999999993789999544788477999987667764410099999999999999999899999
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 60243899999999999999999999983575789
Q gi|254780852|r 87 FKQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 87 ~~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 82 ~~~~~~~~~~~~~~Fi~iL~vGl~Yew~kGaL~We 116 (116)
T MTH00018 82 YNSIAPFGFWTMVGFLFILTLGLIYEWIKGGLEWE 116 (116)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 73253999999999999999999999983765889