HHsearch alignment for GI: 254780852 and conserved domain: MTH00030
>MTH00030 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00 E-value=5.6e-45 Score=256.03 Aligned_cols=118 Identities=43% Similarity=0.932 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 865379999999999999999999999-----715678983241744431300043476652479999999999875999
Q gi|254780852|r 4 LLTSYAPILVFMAIASAIVIVLMISPF-----IVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIA 78 (121)
Q Consensus 4 ~~~~y~~ili~~~~~~~~~~~~~~~s~-----~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv 78 (121)
T Consensus 1 m~~~f~~i~~~ll~~~~i~~l~i~~~~~l~~~ll~p~~p~~eK~spyECG~dp~~~~r~~fsv~FylvAilFliFDvEi~ 80 (123)
T MTH00030 1 MNPEFKTIFFSTLLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEIS 80 (123)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
T ss_conf 96458999999999999999999999999998317789981107876669899987777653006999999999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9979999960243899999999999999999999983575789
Q gi|254780852|r 79 FLFPWAVYFKQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 79 ~l~Pw~~~~~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 81 ~l~Pwav~~~~~~~~~~~~~~~Fl~iL~~Gl~Yew~kG~L~W~ 123 (123)
T MTH00030 81 FLFPWSIVFNQLNLFSFWIVYTFLIVLAIGLAYEWIKGGLEWD 123 (123)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9989999973262999999999999999999999974766899