HHsearch alignment for GI: 254780852 and conserved domain: MTH00030

>MTH00030 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00  E-value=5.6e-45  Score=256.03  Aligned_cols=118  Identities=43%  Similarity=0.932  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             865379999999999999999999999-----715678983241744431300043476652479999999999875999
Q gi|254780852|r    4 LLTSYAPILVFMAIASAIVIVLMISPF-----IVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIA   78 (121)
Q Consensus         4 ~~~~y~~ili~~~~~~~~~~~~~~~s~-----~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv   78 (121)
T Consensus         1 m~~~f~~i~~~ll~~~~i~~l~i~~~~~l~~~ll~p~~p~~eK~spyECG~dp~~~~r~~fsv~FylvAilFliFDvEi~   80 (123)
T MTH00030          1 MNPEFKTIFFSTLLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEIS   80 (123)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH
T ss_conf             96458999999999999999999999999998317789981107876669899987777653006999999999999999


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             9979999960243899999999999999999999983575789
Q gi|254780852|r   79 FLFPWAVYFKQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus        79 ~l~Pw~~~~~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        81 ~l~Pwav~~~~~~~~~~~~~~~Fl~iL~~Gl~Yew~kG~L~W~  123 (123)
T MTH00030         81 FLFPWSIVFNQLNLFSFWIVYTFLIVLAIGLAYEWIKGGLEWD  123 (123)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9989999973262999999999999999999999974766899