HHsearch alignment for GI: 254780852 and conserved domain: MTH00042

>MTH00042 ND3 NADH dehydrogenase subunit 3; Validated.
Probab=100.00  E-value=4.7e-42  Score=240.93  Aligned_cols=112  Identities=40%  Similarity=0.779  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999999999999999999971567898324174443130004347665247999999999987599999799999602
Q gi|254780852|r   10 PILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYFKQ   89 (121)
Q Consensus        10 ~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~~~   89 (121)
T Consensus         3 ~~~~~l~~~~~i~~~~~~~~~~l~~~~~~~eK~spyECGf~p~~~~r~~fsv~FylvAilFlIFDvEi~~l~P~~~~~~~   82 (116)
T MTH00042          3 NFIFVLLIILIVTSLLFFAAHFLPSRNPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPYSTLI   82 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999999994779998101887266969899877776506999999999999999999999999963


Q ss_pred             CCHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             43899-999999999999999999983575789
Q gi|254780852|r   90 ITWLG-FGSMMVFLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus        90 ~~~~~-~~~~~~F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        83 ~~~~~~~~~~~~Fi~iL~~Gl~YeW~kGaL~Wa  115 (116)
T MTH00042         83 LNPSTVLFISLIFLLILTIGLIYEWVNGGLDWA  115 (116)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             464999999999999999999999985752568