HHsearch alignment for GI: 254780852 and conserved domain: MTH00069

>MTH00069 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00  E-value=3.5e-41  Score=236.35  Aligned_cols=110  Identities=45%  Similarity=0.882  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Q ss_conf             99999999999999999999715678983241744431300043476652479999999999875999997--9999960
Q gi|254780852|r   11 ILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLF--PWAVYFK   88 (121)
Q Consensus        11 ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~--Pw~~~~~   88 (121)
T Consensus         2 il~~~~i~~~l~~i~~~ls~~l~~~~~~~eK~spyECGf~p~~~~r~~Fsv~FylvailFlIFDvEi~~l~P~p~a~~~~   81 (114)
T MTH00069          2 IMLMLLISTILSLILITISFWLPLNNPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN   81 (114)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             04699999999999999999957899982118771768699888777767299999999999999999997369999970


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             243899999999999999999999983575789
Q gi|254780852|r   89 QITWLGFGSMMVFLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus        89 ~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        82 ~~-~~~~~~~~~f~~iL~iGl~YeW~kGaL~W~  113 (114)
T MTH00069         82 FP-ENTLFWSTLILILLTLGLIYEWIQGGLEWA  113 (114)
T ss_pred             CH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             22-899999999999999999999986753689