HHsearch alignment for GI: 254780852 and conserved domain: MTH00106
>MTH00106 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00 E-value=7.6e-41 Score=234.55 Aligned_cols=111 Identities=32% Similarity=0.735 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Q ss_conf 999999999999999999999715678983241744431300043476652479999999999875999997--999996
Q gi|254780852|r 10 PILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLF--PWAVYF 87 (121)
Q Consensus 10 ~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~--Pw~~~~ 87 (121)
T Consensus 2 ~lli~l~i~~~i~~il~~~~~ll~~~~~~~eK~spyECGf~p~~~ar~~Fsi~FylvailFliFDvEi~~l~P~p~a~~~ 81 (115)
T MTH00106 2 NLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 39999999999999999999995757998223888477989998766667312599999999999999999878999982
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0243899999999999999999999983575789
Q gi|254780852|r 88 KQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 88 ~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 82 ~~~~~~-~~~~~~fi~iL~~Gl~yew~~GaL~W~ 114 (115)
T MTH00106 82 NNLNTM-LTMALLLISLLAASLAYEWTQKGLEWT 114 (115)
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 437999-999999999999999999985854678