HHsearch alignment for GI: 254780852 and conserved domain: MTH00113

>MTH00113 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00  E-value=1.2e-40  Score=233.43  Aligned_cols=111  Identities=44%  Similarity=0.853  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHH
Q ss_conf             9999999999999999999997156789832417444313000434766524799999999998759999979--99996
Q gi|254780852|r   10 PILVFMAIASAIVIVLMISPFIVAFKSPDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFP--WAVYF   87 (121)
Q Consensus        10 ~ili~~~~~~~~~~~~~~~s~~l~~~~~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~P--w~~~~   87 (121)
T Consensus         2 ~il~~~~i~~~l~~il~~l~~ll~~~~~~~eK~spyECGf~p~~~~r~~Fsi~FyliailFlIFDvEiv~l~P~~w~~~~   81 (115)
T MTH00113          2 NLTFMLTLSLALSTILTTLNFWLAQTKPDIEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQL   81 (115)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             08999999999999999999996778998313887076869767778766629999999999999999999528999986


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             0243899999999999999999999983575789
Q gi|254780852|r   88 KQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus        88 ~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        82 ~~~-~~~~~~~~~Fl~iL~~G~~YeW~~GaL~W~  114 (115)
T MTH00113         82 NSP-TTTLTWATIILLLLTLGLIYEWLQGGLEWA  114 (115)
T ss_pred             CCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             326-999999999999999999999986863658