HHsearch alignment for GI: 254780852 and conserved domain: MTH00148

>MTH00148 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00  E-value=1.6e-41  Score=238.14  Aligned_cols=112  Identities=39%  Similarity=0.760  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf             999999999999999999999715678-983241744431300043476652479999999999875999997999996-
Q gi|254780852|r   10 PILVFMAIASAIVIVLMISPFIVAFKS-PDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYF-   87 (121)
Q Consensus        10 ~ili~~~~~~~~~~~~~~~s~~l~~~~-~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~-   87 (121)
T Consensus         2 ~i~i~l~~~~~i~~i~~~~~~~l~~k~~~~~eK~spyECGf~p~~~~r~~Fsi~FfliailFLiFDvEiv~l~P~~~~~~   81 (116)
T MTH00148          2 TILLSLFILLILNVVLLGLGLVLSKRSNSDREKNSPFECGFDPSSSARSPFSMRFFLLAILFLIFDVEIVLLFPLLSNIM   81 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             59999999999999999999997577899866478837798999877887750279999999999999999989999994


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             0243899999999999999999999983575789
Q gi|254780852|r   88 KQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD  121 (121)
Q Consensus        88 ~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~  121 (121)
T Consensus        82 ~~~~~~~~~~~~~Fl~iL~~Gl~yeW~~G~L~W~  115 (116)
T MTH00148         82 NSVSHWGLTSSLIFLLILLLGLFHEWNEGSLDWM  115 (116)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             1647999999999999999999999985751338