HHsearch alignment for GI: 254780852 and conserved domain: MTH00161
>MTH00161 ND3 NADH dehydrogenase subunit 3; Provisional.
Probab=100.00 E-value=2.9e-41 Score=236.72 Aligned_cols=110 Identities=43% Similarity=0.834 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999715678-98324174443130004347665247999999999987599999799999602
Q gi|254780852|r 11 ILVFMAIASAIVIVLMISPFIVAFKS-PDPEKLSTYECGFDPFDDARVKFDIRFCLVSVLFVIFDLEIAFLFPWAVYFKQ 89 (121)
Q Consensus 11 ili~~~~~~~~~~~~~~~s~~l~~~~-~~~~K~s~yECGf~p~~~~~~~Fsi~fyliallFliFDvEiv~l~Pw~~~~~~ 89 (121)
T Consensus 2 ~l~~l~~~~~i~~~l~~l~~ll~~k~~~~~eK~spyECGf~p~~~~r~~Fsi~FylvailFliFDvEiv~l~P~~~~~~~ 81 (113)
T MTH00161 2 LMMIMIIILIISFILMILASILSKKTIMDREKNSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIVLLLPIPIIFKT 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999983899998110888576979999877777606999999999999889999999999987
Q ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 438999-9999999999999999998357578
Q gi|254780852|r 90 ITWLGF-GSMMVFLGILTVGFIYEWKKGALEW 120 (121)
Q Consensus 90 ~~~~~~-~~~~~F~~iL~~gl~yew~~G~L~W 120 (121)
T Consensus 82 ~~~~~~~~~~~~Fl~iL~iGliyew~~GaL~W 113 (113)
T MTH00161 82 SNMMSWFLTSIFFLLILLLGLYYEWNQGALEW 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 12799999999999999999999998386889