HHsearch alignment for GI: 254780852 and conserved domain: PRK06432
>PRK06432 NADH dehydrogenase subunit A; Validated.
Probab=100.00 E-value=1.3e-41 Score=238.58 Aligned_cols=118 Identities=25% Similarity=0.475 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------------------------CHHHHCHHHHHCHHCCCCCCC
Q ss_conf 8653799999999999999999999997156789-------------------------832417444313000434766
Q gi|254780852|r 4 LLTSYAPILVFMAIASAIVIVLMISPFIVAFKSP-------------------------DPEKLSTYECGFDPFDDARVK 58 (121)
Q Consensus 4 ~~~~y~~ili~~~~~~~~~~~~~~~s~~l~~~~~-------------------------~~~K~s~yECGf~p~~~~~~~ 58 (121)
T Consensus 1 Ml~~YvPilvl~~ia~~~~~~~~~i~~~igp~Ry~~~r~k~~~~~i~~~~~~e~~p~~~~~~~l~pyEcG~~~~e~a~~r 80 (144)
T PRK06432 1 MLDGYIPLLIIIVVIPLALIFGFKILPALGANRYGDNRISLKTEDILKKAAYEDTPPGSDQSYLEPYESGEVAREIWGGP 80 (144)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98531369999999999999999998752632135441121255565404667899997702278733588631246773
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 524799999999998759999979999960243899999999999999999999983575789
Q gi|254780852|r 59 FDIRFCLVSVLFVIFDLEIAFLFPWAVYFKQITWLGFGSMMVFLGILTVGFIYEWKKGALEWD 121 (121)
Q Consensus 59 Fsi~fyliallFliFDvEiv~l~Pw~~~~~~~~~~~~~~~~~F~~iL~~gl~yew~~G~L~W~ 121 (121)
T Consensus 81 F~VrfYlvAmLFiiFDvE~vFLyPWAv~f~~lG~~g~iem~iFi~iL~vg~~YawkkGaL~W~ 143 (144)
T PRK06432 81 SINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPLFAVYYAFKMGYMRWL 143 (144)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 211138999999999999999999899998702999999999999999999999741520016