HHsearch alignment for GI: 254780853 and conserved domain: COG1740
>COG1740 HyaA Ni,Fe-hydrogenase I small subunit [Energy production and conversion].
Probab=98.99 E-value=1.4e-09 Score=77.01 Aligned_cols=149 Identities=17% Similarity=0.299 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHCCEEEEEHHHHHHH----HHC-CCCEEEEECCCCCCHHHHHHCCCCCC--HHHC-CEEE-----CCCC
Q ss_conf 25777667541087688559999845----612-88347752354652135663366678--6764-8487-----0682
Q gi|254780853|r 24 ADFSRISSEITHKGFLVTSVDQLVTW----ART-GSLMWMTFGLACCAVEMMQASMPRYD--LERF-GFAP-----RASP 90 (185)
Q Consensus 24 ~~~~~~~~~~~~~~~i~t~~d~l~nW----~R~-~Slwp~~fg~aCC~iE~~a~~~p~yD--~eRf-G~~~-----~~sP 90 (185)
T Consensus 16 r~f~k~~~~~~a~l~L~~~~~~~~~~a~e~~~~~~viWLhg~eCTGcteSfLrs~~P~~~~li~~~IsL~Yhetlmaa~G 95 (355)
T COG1740 16 RDFLKLCGALAASLGLSASYAPEIAKALENKPRTPVIWLHGLECTGCTESFLRSEHPTANDLILELISLEYHETLMAASG 95 (355)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 88999999999875367201699999985587784698704555677688760479979999999875422035544122
Q ss_pred C--------------CCCEEEEECCCCHH---------HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCCCEECC
Q ss_conf 2--------------06079971413455---------69999999984686661998535566886347--88722077
Q gi|254780853|r 91 R--------------QSDVMIVAGTLTNK---------MASALRRVYDQMPEPRYVISMGSCANGGGYYH--YSYSVVRG 145 (185)
Q Consensus 91 R--------------qADvliVtG~vT~k---------m~~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~--~sY~v~~g 145 (185)
T Consensus 96 ~~aee~l~~~i~~~kg~yILvVEG~v~~~~~G~y~~vgg~~~~e~l~kaA~~A~aIiAvG~CAs~GgI~AA~pnps~a~~ 175 (355)
T COG1740 96 TQAEELLEDAILKYKGKYILVVEGAVPLGENGMYCIVGGEPFKEILRKAAEGASAIIAVGTCASWGGIQAAKPNPTGAGP 175 (355)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCCCC
T ss_conf 26899999999743785599980676679985179876802899999986137669998604245883036779977655
Q ss_pred CCCCC---CCEEECCCCCCCHHHHHHHHHHH
Q ss_conf 22232---23067488768989999999999
Q gi|254780853|r 146 CDRIV---PVDIYVPGCPPTAEALIYGILLL 173 (185)
Q Consensus 146 ~d~~i---PVDvyVPGCPPrPeail~gl~~L 173 (185)
T Consensus 176 i~ev~~~kpV-INiPGCPp~pd~iv~tl~~~ 205 (355)
T COG1740 176 LSEVIKDKPV-INIPGCPPNPDWIVATLLHI 205 (355)
T ss_pred CEECCCCCCE-EECCCCCCCCHHHHHHHHHH
T ss_conf 0000268855-65899989810579999999