HHsearch alignment for GI: 254780853 and conserved domain: COG1941

Probab=99.61  E-value=1.2e-15  Score=112.46  Aligned_cols=111  Identities=26%  Similarity=0.494  Sum_probs=82.9

Q ss_pred             CC--CCHHHHHHCCCCCCHHHCC-EE-------ECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             46--5213566336667867648-48-------70682206079971413455699999999846866619985355668
Q gi|254780853|r   63 AC--CAVEMMQASMPRYDLERFG-FA-------PRASPRQSDVMIVAGTLTNKMASALRRVYDQMPEPRYVISMGSCANG  132 (185)
Q Consensus        63 aC--C~iE~~a~~~p~yD~eRfG-~~-------~~~sPRqADvliVtG~vT~km~~~l~~~yeqmpePK~ViA~G~Ca~s  132 (185)
T Consensus        13 gC~GC~~slldl~E~L~dll~~~div~~~~l~D~keiPE-vDValVEGsV~--~ee~lE~v~ElRekakivVA~GsCA~~   89 (247)
T COG1941          13 GCSGCHMSLLDLYEKLLDLLEDADIVYCPTLVDEKEIPE-VDVALVEGSVC--DEEELELVKELREKAKIVVALGSCAVT   89 (247)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCC-CCEEEEECCCC--CHHHHHHHHHHHHHCCEEEEEECCHHC
T ss_conf             565136678769999997652101787100135564876-43899854327--688899999999738489997523530


Q ss_pred             CCCCC-----------CCC---------CEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf             86347-----------887---------220772223223067488768989999999999999
Q gi|254780853|r  133 GGYYH-----------YSY---------SVVRGCDRIVPVDIYVPGCPPTAEALIYGILLLQKK  176 (185)
Q Consensus       133 GG~f~-----------~sY---------~v~~g~d~~iPVDvyVPGCPPrPeail~gl~~L~~k  176 (185)
T Consensus        90 Ggv~~~~~~s~~e~l~~~y~~~~~~~~~~~v~Pl~evI~VD~~IpGCPP~~e~I~~al~all~g  153 (247)
T COG1941          90 GGVQGLRNKSGEELLRPVYGDAKSTFNEESVVPLGEVIDVDYAIPGCPPSPEEIARALTALLEG  153 (247)
T ss_pred             CCCHHHHHCCCCCCCHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf             8864463335320004565304577876515770032651154689885989999999999769