HHsearch alignment for GI: 254780853 and conserved domain: PRK06411
>PRK06411 NADH dehydrogenase subunit B; Validated.
Probab=100.00 E-value=0 Score=496.65 Aligned_cols=155 Identities=70% Similarity=1.162 Sum_probs=148.1
Q ss_pred HHHHHHHHCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHHCCEEECCCCCCCCEEEEECCCCHHHH
Q ss_conf 76675410876885599998456128834775235465213566336667867648487068220607997141345569
Q gi|254780853|r 28 RISSEITHKGFLVTSVDQLVTWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGFAPRASPRQSDVMIVAGTLTNKMA 107 (185)
Q Consensus 28 ~~~~~~~~~~~i~t~~d~l~nW~R~~Slwp~~fg~aCC~iE~~a~~~p~yD~eRfG~~~~~sPRqADvliVtG~vT~km~ 107 (185)
T Consensus 16 ~~~~~~~~~~~~~t~~d~~~nW~r~~SlWp~~fg~aCC~IE~~a~~~pryD~eRfG~~~~aSPRqADvliVtG~vT~km~ 95 (195)
T PRK06411 16 DPLEEELDKGVVLTTLDDLLNWARKNSLWPMTFGLACCAVEMMAAGTSRYDLDRFGMVFRASPRQADLMIVAGTLTNKMA 95 (195)
T ss_pred CCHHHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCCCCEEEEECCCHHHHH
T ss_conf 82345325876986799986466607843577761428998987448854777705256058752447897052318889
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999984686661998535566886347887220772223223067488768989999999999999964126
Q gi|254780853|r 108 SALRRVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGILLLQKKIRRVGN 182 (185)
Q Consensus 108 ~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~~sY~v~~g~d~~iPVDvyVPGCPPrPeail~gl~~L~~ki~~~~~ 182 (185)
T Consensus 96 ~~l~~~YeqmPePK~VIA~G~Ca~sGG~f~~sY~v~~gvd~~iPVDvyVPGCPPrPEAil~gi~~Lq~kI~~~~r 170 (195)
T PRK06411 96 PALRRLYDQMPEPKWVISMGSCANSGGMYHYSYSVVRGVDKIVPVDVYVPGCPPRPEALLYGIMKLQKKIQGVRR 170 (195)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999985899707998455557786346886111688760234567889886989999999999999843344