HHsearch alignment for GI: 254780853 and conserved domain: PRK06411

>PRK06411 NADH dehydrogenase subunit B; Validated.
Probab=100.00  E-value=0  Score=496.65  Aligned_cols=155  Identities=70%  Similarity=1.162  Sum_probs=148.1

Q ss_pred             HHHHHHHHCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHHCCEEECCCCCCCCEEEEECCCCHHHH
Q ss_conf             76675410876885599998456128834775235465213566336667867648487068220607997141345569
Q gi|254780853|r   28 RISSEITHKGFLVTSVDQLVTWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGFAPRASPRQSDVMIVAGTLTNKMA  107 (185)
Q Consensus        28 ~~~~~~~~~~~i~t~~d~l~nW~R~~Slwp~~fg~aCC~iE~~a~~~p~yD~eRfG~~~~~sPRqADvliVtG~vT~km~  107 (185)
T Consensus        16 ~~~~~~~~~~~~~t~~d~~~nW~r~~SlWp~~fg~aCC~IE~~a~~~pryD~eRfG~~~~aSPRqADvliVtG~vT~km~   95 (195)
T PRK06411         16 DPLEEELDKGVVLTTLDDLLNWARKNSLWPMTFGLACCAVEMMAAGTSRYDLDRFGMVFRASPRQADLMIVAGTLTNKMA   95 (195)
T ss_pred             CCHHHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCCCCEEEEECCCHHHHH
T ss_conf             82345325876986799986466607843577761428998987448854777705256058752447897052318889


Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999984686661998535566886347887220772223223067488768989999999999999964126
Q gi|254780853|r  108 SALRRVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGILLLQKKIRRVGN  182 (185)
Q Consensus       108 ~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~~sY~v~~g~d~~iPVDvyVPGCPPrPeail~gl~~L~~ki~~~~~  182 (185)
T Consensus        96 ~~l~~~YeqmPePK~VIA~G~Ca~sGG~f~~sY~v~~gvd~~iPVDvyVPGCPPrPEAil~gi~~Lq~kI~~~~r  170 (195)
T PRK06411         96 PALRRLYDQMPEPKWVISMGSCANSGGMYHYSYSVVRGVDKIVPVDVYVPGCPPRPEALLYGIMKLQKKIQGVRR  170 (195)
T ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999985899707998455557786346886111688760234567889886989999999999999843344