HHsearch results for GI: 254780853 and protein with PDBid: 2wpn_A
>2wpn_A Periplasmic [nifese] hydrogenase, small subunit; metal-binding, oxidoreductase, oxygen tolerance; HET: FSX SBY PSW; 2.04A {Desulfovibrio vulgaris}
Probab=99.51 E-value=1.8e-14 Score=104.22 Aligned_cols=123 Identities=19% Similarity=0.408 Sum_probs=88.4
Q ss_pred HCCCCEEEEECCCC--CCHHHHHHCCCCCC--HHHCCEEECCCC---------------------CCCCEEEEECCCCHH
Q ss_conf 12883477523546--52135663366678--676484870682---------------------206079971413455
Q gi|254780853|r 51 RTGSLMWMTFGLAC--CAVEMMQASMPRYD--LERFGFAPRASP---------------------RQSDVMIVAGTLTNK 105 (185)
Q Consensus 51 R~~Slwp~~fg~aC--C~iE~~a~~~p~yD--~eRfG~~~~~sP---------------------RqADvliVtG~vT~k 105 (185)
|-+=+| ++++ +| |.+.+..+..|..+ +..+ +.++..| +..||++|.|.|+.+
T Consensus 41 k~~viW-l~~~-~C~GC~iSlL~~~~p~l~d~l~~~-i~l~yhp~lm~~~g~~a~~~l~~~~~~~~~~~IlvVEGsI~~~ 117 (317)
T 2wpn_A 41 RPPVFW-LQGQ-GCTGCSVTLLNSVHPSIADVLLKV-ISLEFHPTVMAWEGEHAIEHMRKVAEKFKGKFFLVIEGSVPVE 117 (317)
T ss_dssp CCEEEE-EESB-CCSHHHHHHHTCCCTTHHHHHHHT-CEEEECTTTCSCCHHHHHHHHHHHHHHTTTTEEEEEESBEECT
T ss_pred CCCEEE-EECC-CCCCHHHHHHCCCCCCHHHHHHCC-EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf 983798-6389-787669998677999899998405-4475321243452689999999998436786489986226538
Q ss_pred HH--------------HHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCCCEECCCCCCC------CCEEECCCCCCCH
Q ss_conf 69--------------999999984686661998535566886347--8872207722232------2306748876898
Q gi|254780853|r 106 MA--------------SALRRVYDQMPEPRYVISMGSCANGGGYYH--YSYSVVRGCDRIV------PVDIYVPGCPPTA 163 (185)
Q Consensus 106 m~--------------~~l~~~yeqmpePK~ViA~G~Ca~sGG~f~--~sY~v~~g~d~~i------PVDvyVPGCPPrP 163 (185)
.. +.+..+.+..+..|.|||+|+||+.||+.. .++.-..++++++ ..+++||||||+|
T Consensus 118 ~~~~~~~~g~~~~~~~~~~e~lk~lr~kak~vVA~GtCA~~GGIpa~~~~~t~~~~~~~~~~~~~~~~pvinipgcPp~p 197 (317)
T 2wpn_A 118 ADGKYCIIGEANHHEISMVDALKEFGPNAAAVLAVGTCAAYGGIPAAEGSETGATAVSKFLGDNGIKTPVVNIPGCPPHP 197 (317)
T ss_dssp GGGTTBEEEEETTEEEEHHHHHHHHGGGEEEEEEEHHHHHHCTGGGSTTCCSCEECHHHHHHHTTCCCCEEEECSSSCCH
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCH
T ss_conf 99615864487777664999999998528778997410102783446789988633887507656789721589998971
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780853|r 164 EALIYGILLLQKK 176 (185)
Q Consensus 164 eail~gl~~L~~k 176 (185)
+.|.+.+..+...
T Consensus 198 ~~i~~~l~~~~~~ 210 (317)
T 2wpn_A 198 DWIVGTVVLALDA 210 (317)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC
T ss_conf 7899999999750