RPSBLAST alignment for GI: 254780853 and conserved domain: TIGR03294

>gnl|CDD|132337 TIGR03294, FrhG, coenzyme F420 hydrogenase, subunit gamma. This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein contains two 4Fe-4S cluster binding domains (pfam00037) and scores above the trusted cutoff to model pfam01058 for the "NADH ubiquinone oxidoreductase, 20 Kd subunit" family. Length = 228

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 17/93 (18%)

Query: 94  DVMIVAGTLTNKMASALRRVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVP-- 151
           DV +V G++  +   +L  + +   + + V+++G+CA  G +  YS    RG  +  P  
Sbjct: 52  DVALVEGSVCLQDEHSLEEIKELREKAKVVVALGACAATGNFTRYS----RGGQQAQPQH 107

Query: 152 -----------VDIYVPGCPPTAEALIYGILLL 173
                      VD+ +PGCPP+ EA+    + L
Sbjct: 108 ESFVPITDVIDVDLAIPGCPPSPEAIRNVCVAL 140