HHsearch alignment for GI: 254780854 and conserved domain: PRK13292
>PRK13292 trifunctional NADH dehydrogenase I subunit B/C/D; Provisional.
Probab=100.00 E-value=0 Score=310.67 Aligned_cols=147 Identities=36% Similarity=0.623 Sum_probs=136.3
Q ss_pred HHHHHHHHHCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC-----EEEEEEEEEC
Q ss_conf 99999998615311457984795999986898999999987187898014751325688777785-----7999996615
Q gi|254780854|r 7 DLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-----FDVVYHFLSP 81 (202)
Q Consensus 7 ~L~~~L~~~l~~~I~~~~~~~~el~i~V~~~~l~~vl~~LKdd~~~~F~~LiDItaVDyp~~~~R-----FeVvY~LlS~ 81 (202)
T Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~lk~~~~~~f~~l~~i~~vD~~~~~~~~~~~~~~~~y~l~s~ 298 (784)
T PRK13292 219 GLAGELEEAFGDRVRVEEFATDMLTYRCPPELVPEVLRHLKQRSSAPFRRLEDLAAVDESCRRERSAFPDFTVNYHLLSF 298 (784)
T ss_pred HHHHHHHHHHCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCCCCCCCCCEEEEEEEECC
T ss_conf 58899998726544651465663256347777799999986555644201025211102011366667855899996124
Q ss_pred CCCCEEEEEEEECC-CCEEECCCCCEECCCCEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75205998212057-8501012233025531011210113827356798767788998987871133778984
Q gi|254780854|r 82 KYNRRLRVKIAVAE-GKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFPVTGF 153 (202)
Q Consensus 82 ~~n~ri~Vk~~v~e-~~~vpSi~~i~p~A~W~ERE~~DmfGI~F~gHPdlRRiL~d~~feGhPLRKDFPltG~ 153 (202)
T Consensus 299 ~~~~~~~~~~~~~~~~p~~psi~~~~p~a~w~ErE~~d~fGi~f~ghp~~rr~~l~~~~~~~PlrKD~~~~~~ 371 (784)
T PRK13292 299 DTPGHLRIKTELRGDTPELPSITGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDWEGHPLRKEHPFRAT 371 (784)
T ss_pred CCCCEEEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 6786589983168778999835663347752888888743714369988412358998999986678877666