HHsearch results for GI: 254780854 and protein with PDBid: 3mcr_A
>3mcr_A NADH dehydrogenase, subunit C; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.65A {Thermobifida fusca}
Probab=100.00 E-value=0 Score=304.75 Aligned_cols=129 Identities=33% Similarity=0.641 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC-CCEEEEEEEEECC
Q ss_conf 799999999986153114579847959999868989999999871878980147513256887777-8579999966157
Q gi|254780854|r 4 KIEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRS-NRFDVVYHFLSPK 82 (202)
Q Consensus 4 ~L~~L~~~L~~~l~~~I~~~~~~~~el~i~V~~~~l~~vl~~LKdd~~~~F~~LiDItaVDyp~~~-~RFeVvY~LlS~~ 82 (202)
.|+++.+.+...|+++|+++++.+|+++|.|++++|.++|++||+++.|+|++|+||||||||++. .||++||||+|++
T Consensus 83 ~L~~~~~~~~~~~~~aI~~vvv~rGeltl~V~~e~L~~V~~~LKdd~~l~Fe~L~dltgVDype~~~~rf~vVYhL~S~~ 162 (213)
T 3mcr_A 83 ALERSLKEIGTPYDTAISRVVVDRGEITFHVQREHLLDVATRLRDDPALRFELCLGVTGVHYPEDEGNELHAVYALRSIT 162 (213)
T ss_dssp HHHHHHHHTTCCHHHHEEEEEEETTEEEEEECGGGHHHHHHHHHHCTTTCCCEEEEEEEEECTTSTTCCEEEEEEEEETT
T ss_pred HHHHHHHHHHCHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCC
T ss_conf 99999987301032130389998998999985999999999996288999763100200716765688358999830366
Q ss_pred CCCEEEEEEEECCCC-EEECCCCCEECCCCEECCCHHHCCCEECCCCCCCC
Q ss_conf 520599821205785-01012233025531011210113827356798767
Q gi|254780854|r 83 YNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRR 132 (202)
Q Consensus 83 ~n~ri~Vk~~v~e~~-~vpSi~~i~p~A~W~ERE~~DmfGI~F~gHPdlRR 132 (202)
+|.||+||+.++++. .||||++|||+|||||||+||||||.|+|||||||
T Consensus 163 ~n~rIrlkv~v~~~dP~IPSI~~I~psAnW~ERE~yDMFGI~F~GHPdLrR 213 (213)
T 3mcr_A 163 HNYEIRLEVSCPDSDPHIPSIVSVYPTNDWHEREAWDFFGIIFDGHPALTR 213 (213)
T ss_dssp TTEEEEEEEEECTTSCEEECCTTTCTTHHHHHHHHHHHHCCEEETCGGGC-
T ss_pred CCCEEEEEECCCCCCCCCCEEHHHCCCCCHHHHHHHHCCCEEECCCCCCCC
T ss_conf 661368860346688968704210257677688776136801788998889