RPSBLAST alignment of GI: 254780854 and protein with PDBid: 3i9v

>3i9v_5 NADH-quinone oxidoreductase subunit 5; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_5* 3iam_5* 3ias_5* Length = 207

 Score =  134 bits (337), Expect = 2e-32
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 32/188 (17%)

Query: 25  NSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLS----RSNRFDVVYHFLS 80
           N +G L + +         +  +      F  + D+ G+D+L+    R  RF VVY  +S
Sbjct: 20  NGLGNLWVVLPRERFKEEMAHYKA---MGFNFLADIVGLDYLTYPDPRPERFAVVYELVS 76

Query: 81  PKY-----NRRLRVKIAV-AEGKSVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRIL 134
                     R  V++ V  E   +P++  ++  A++ EREV+D++GI FEGHPDLR+IL
Sbjct: 77  LPGWKDGDGSRFFVRVYVPEEDPRLPTVTDLWGSANFLEREVYDLFGIVFEGHPDLRKIL 136

Query: 135 TDYGFEGHPLRKDFPV----TGFVELHY----------DDKVKKVVYRPVELMQEHRDYD 180
           T    EGHPLRKD+P+    T F E  Y            K   + +      + +R   
Sbjct: 137 TPEDLEGHPLRKDYPLGETPTLFREGRYIIPAEFRAALTGKDPGLTFYKGGSRKGYR--- 193

Query: 181 FLSPWEGV 188
             S W  +
Sbjct: 194 --SLWADL 199