RPSBLAST alignment of GI: 254780854 and protein with PDBid: 3mcr

>3mcr_A NADH dehydrogenase, subunit C; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.65A {Thermobifida fusca} Length = 213

 Score =  145 bits (367), Expect = 6e-36
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 2/130 (1%)

Query: 5   IEDLGDYIVNSFSGSVRFAVNSVGELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVD 64
           +E     I   +  ++   V   GE++  V    L+ + + LRDDP   F   + + GV 
Sbjct: 84  LERSLKEIGTPYDTAISRVVVDRGEITFHVQREHLLDVATRLRDDPALRFELCLGVTGVH 143

Query: 65  FLSR-SNRFDVVYHFLSPKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGI 122
           +     N    VY   S  +N  +R++++  +    +PSIV +YP  DW ERE WD +GI
Sbjct: 144 YPEDEGNELHAVYALRSITHNYEIRLEVSCPDSDPHIPSIVSVYPTNDWHEREAWDFFGI 203

Query: 123 FFEGHPDLRR 132
            F+GHP L R
Sbjct: 204 IFDGHPALTR 213