HHsearch alignment of GI: 254780855 and MMDB domain: 1yq9_H_1-55_493-536
>1yq9_H (H:1-55,H:493-536) Periplasmic [NIFE] hydrogenase large subunit; oxidoreductase; 2.35A {Desulfovibrio gigas}
Probab=98.77 E-value=1e-08 Score=79.44 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=44.7
Q ss_pred CEEEEEEEECCCCCEEEEEEECCCCC-----------------CHHHHHHHHCCCCCCH------HHHHHHHCCCCCCCC
Q ss_conf 11799999879980889998358756-----------------8688999970880575------999897609120553
Q gi|254780855|r 338 GEFGVYLISDGGNKPYRCKIRAPGYA-----------------HLQAMEFLCKGHQLAD------VSAILGSLDIVFGEV 394 (396)
Q Consensus 338 G~L~H~~~~~~~g~i~~~~ii~PT~~-----------------N~~~~e~al~G~~i~D------~~~iirSfDpC~sC~ 394 (396)
|-+--.+.++ ||+|+.+++-.--+- |.+++|+||+|++|+| +.++|||||||++|+
T Consensus 19 Gh~~i~v~ve-~g~V~da~~~~~~~RGFE~iL~GR~p~rd~~g~~gp~E~al~gt~i~~~~~Piei~r~irSfDpC~~Ca 97 (99)
T 1yq9_H 19 GHLRIEVEVE-GGKIKNAWSMSTLFRGLEMILKGRDPRRCAEGKLSAVEQALIGTPIADPKRPVEILRTVHSYDPCIACG 97 (99)
T ss_dssp SCEEEEEEEE-TTEEEEEEEEECBCCCHHHHHTTSCGGCCTTCCCCHHHHHHTTCBCSCTTSCHHHHHHHHHTCCBHHHH
T ss_pred EEEEEEEEEE-CCEEEEEEECCCCCCHHHHHHCCCCHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 1389999982-998999998247763498986799988444456039999837998898630766757862167650210