HHsearch alignment of GI: 254780855 and MMDB domain: 1yqw_Q_1-62_506-549

>1yqw_Q (Q:1-62,Q:506-549) Periplasmic [NIFE] hydrogenase large subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 1yrq_H 3h3x_Q 3cus_Q 3cur_H 1frf_L
Probab=99.06  E-value=3.6e-10  Score=89.51  Aligned_cols=55  Identities=22%  Similarity=0.262  Sum_probs=48.6

Q ss_pred             CCEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEEEECCCHHHHHHHHCCCCHH-HHH
Q ss_conf             615998406868666775599999839989999988041157889874098987-855
Q gi|254780855|r    6 SRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFL-QAV   62 (396)
Q Consensus         6 ~~~~~~~~gp~~~~~~g~l~~~~~v~~~~V~~a~~~~g~~~RGfE~il~Gr~~~-da~   62 (396)
                      +.+-+|.+.|+. +++||+++++.+||++|++|+++ +++|||||+||+||||+ |..
T Consensus        11 ~~~~~I~IdPiT-RIEGh~~i~v~vddg~V~da~~~-~~~~RGFE~iL~GR~prrd~~   66 (106)
T 1yqw_Q           11 TFTGPIVVDPIT-RIEGHLRIMVEVENGKVKDAWSS-SQLFRGLEIILKGRDPRRGAQ   66 (106)
T ss_dssp             CCCEEEEECSCC-SSBSCEEEEEEEETTEEEEEEEE-ECBCCCHHHHHTTSCGGCCTT
T ss_pred             CCCEEEEECCCC-CEEEEEEEEEEEECCEEEEEEEE-CCCCCHHHHHHCCCCHHCCCC
T ss_conf             874006977857-03300799999969999999990-365748999976999883323