HHsearch alignment of GI: 254780855 and MMDB domain: 1yqw_Q_95-282_382-458
>1yqw_Q (Q:95-282,Q:382-458) Periplasmic [NIFE] hydrogenase large subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 1yrq_H 3h3x_Q 3cus_Q 3cur_H 1frf_L
Probab=99.78 E-value=2.9e-19 Score=152.93 Aligned_cols=177 Identities=10% Similarity=-0.184 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------------HHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 78889999999999999998899987433430564----------------------18999999999999789975597
Q gi|254780855|r 92 IPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGAL----------------------TPPLWGFEEREKLMVFYERASGS 149 (396)
Q Consensus 92 vp~~a~llR~Ll~~~e~i~sH~~h~~~l~~~~~~~----------------------~~~~~~~~~r~~~~~~~~~~gG~ 149 (396)
||++|++||||++.+|+||||++|||+|+.||+.. ..+..++++|+.++++++++||+
T Consensus 1 IP~~A~~lRnL~~~~e~iqsH~lHfy~L~aPDf~~~~~a~~~~p~~~~~~~~a~~~~~~~~~~~~ir~~~~~i~~~igG~ 80 (265)
T 1yqw_Q 1 IPANARMMRNLVMASQYLHDHLVHFYHLHALDWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESG 80 (265)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGTCCTGGGGGSCHHHHHHHHHTTSCCCGGGSHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 89789999999999999998899999861424205531232451079987420134565431135689999999887504
Q ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 647633653620007898999999999999999999999998448333442-1221123033331023566510136760
Q gi|254780855|r 150 RMHAAYFRPGGVHQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQR-NVNIGTVKLEDAWGWGFSGVMIRGSGAA 228 (396)
Q Consensus 150 ~~Hp~~~vpGGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~G~~~~~~g~~ 228 (396)
+|||++++|||+++.++..++++++..++..+++.+...+.+.....+... ....+.............|.. ..+..
T Consensus 81 ~~Hp~~~vpGGv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--~~~~~ 158 (265)
T 1yqw_Q 81 QLGIFTNAYFLGGHKAYYLPPEVNLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTKDP--LANYL 158 (265)
T ss_dssp CCGGGTTCTTTTCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSCCCEETTEECCGGGGSHHH--HHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCCHHH--HHHHH
T ss_conf 4443454333577740246722202456889999999999999999974987455704646271567779999--99999
Q ss_pred CHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 102101754433467754001012320122110001168758999999962
Q gi|254780855|r 229 WDLRKSQPYECYSELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNR 279 (396)
Q Consensus 229 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 279 (396)
++..++..+.. -....++++....+.+..+|.++++|..+.+
T Consensus 159 ~~~~~y~~~i~---------e~~~p~s~ak~~~yk~~~yevGplar~~~~~ 200 (265)
T 1yqw_Q 159 ALSKEVCQFVN---------ECYIPDLLAVAGFYKDWGGEVGPLARTFIAY 200 (265)
T ss_dssp HHHHHHHHHHH---------HTHHHHHHHHHHHTGGGGGBCSHHHHHHHHH
T ss_pred HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
T ss_conf 99999999999---------7566689999988887765457216553122