BLAST/PSIBLAST alignment of GI: 254780855 and GI: 15965020 at iteration 1
>gi|15965020|ref|NP_385373.1| NADH dehydrogenase subunit D [Sinorhizobium meliloti 1021] Length = 396
>gi|307301092|ref|ZP_07580861.1| NADH dehydrogenase I, D subunit [Sinorhizobium meliloti BL225C] Length = 396
>gi|307317826|ref|ZP_07597264.1| NADH dehydrogenase I, D subunit [Sinorhizobium meliloti AK83] Length = 396
>gi|7387955|sp|P56907|NUOD1_RHIME RecName: Full=NADH-quinone oxidoreductase subunit D 1; AltName: Full=NADH dehydrogenase I subunit D 1; AltName: Full=NDH-1 subunit D 1 Length = 396
>gi|5650737|emb|CAB51623.1| nuoD1 [Sinorhizobium meliloti] Length = 396
>gi|15074199|emb|CAC45846.1| Probable NADH-quinone oxidoreductase subunit D 1 [Sinorhizobium meliloti 1021] Length = 396
>gi|306896588|gb|EFN27336.1| NADH dehydrogenase I, D subunit [Sinorhizobium meliloti AK83] Length = 396
>gi|306904047|gb|EFN34633.1| NADH dehydrogenase I, D subunit [Sinorhizobium meliloti BL225C] Length = 396
 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/396 (83%), Positives = 368/396 (92%)

Query: 1   MDKKKSRSFTINFGPQHPAAHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQ 60
           M +   R+F INFGPQHPAAHGVLRL+LELDGEIVERVDPHIGLLHRGTEKLIE KT+LQ
Sbjct: 1   MTEHNVRNFNINFGPQHPAAHGVLRLVLELDGEIVERVDPHIGLLHRGTEKLIEAKTYLQ 60

Query: 61  AVPYFDRLDYVAPMNQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQA 120
           A+PYFDRLDYVAPMNQEHA+ALAVE+L G ++PIRGQLIRVLYSEIGRILSHLLNVTTQA
Sbjct: 61  AIPYFDRLDYVAPMNQEHAFALAVERLTGTQVPIRGQLIRVLYSEIGRILSHLLNVTTQA 120

Query: 121 MDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSF 180
           MDVGALTPPLWGFEEREKLMVFYERA G+RMHAAYFRPGGVHQD+P +LVEDIG W D F
Sbjct: 121 MDVGALTPPLWGFEEREKLMVFYERACGARMHAAYFRPGGVHQDLPHQLVEDIGNWIDPF 180

Query: 181 PSALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECY 240
              ++DI +LLTGNRIFKQRNV+IG V LEDAW WGFSGVM+RGSGAAWDLR+SQPYECY
Sbjct: 181 LKTVDDIDELLTGNRIFKQRNVDIGVVSLEDAWAWGFSGVMVRGSGAAWDLRRSQPYECY 240

Query: 241 SELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDPKIVPPK 300
           S+L+FDIPIGK+GDC+DRYL+RM+EMR+S +I+RQCV+RLLG  K+GPVS+ D KIVPPK
Sbjct: 241 SDLEFDIPIGKNGDCFDRYLIRMIEMRQSARIMRQCVDRLLGDAKIGPVSSLDGKIVPPK 300

Query: 301 RADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAP 360
           R +MKRSME+LIHHFKLYTEGYHVP GEVYAAVEAPKGEFGVYL+SDG NKPYRCKIRAP
Sbjct: 301 RGEMKRSMEALIHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGTNKPYRCKIRAP 360

Query: 361 GYAHLQAMEFLCKGHQLADVSAILGSLDIVFGEVDR 396
           GYAHLQAM+FLC+GHQLADVSA+LGSLDIVFGEVDR
Sbjct: 361 GYAHLQAMDFLCRGHQLADVSAVLGSLDIVFGEVDR 396