PSIBLAST alignment of GI: 254780855 and protein with PDB id: 1cc1
>gi|5542158|pdb|1CC1|L Chain L, Crystal Structure Of A Reduced, Active Form Of The Ni-Fe-Se Hydrogenase From Desulfomicrobium Baculatum Length = 498
Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 66/479 (13%), Positives = 125/479 (26%), Gaps = 108/479 (22%)
Query: 20 AHGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHA 79
G L++ +E+ V G + RG E+++ + + R+ V P A
Sbjct: 22 VEGHLKIEVEVKDGKVVDAKCSGG-MFRGFEQILRGRDPRDSSQIVQRICGVCPTAHCTA 80
Query: 80 YALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTP----------- 128
+A + G+++ G++ R L + SH+L+ A P
Sbjct: 81 SVMAQDDAFGVKVTTNGRITRNLIFGANYLQSHILHFYHLAALDYVKGPDVSPFVPRYAN 140
Query: 129 ------------------------PLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQD 164
L E R G H GG +
Sbjct: 141 ADLLTDRIKDGAKADATNTYGLNQYLKALEIRRICHEMVAMFGGRMPHVQGMVVGGATEI 200
Query: 165 IPPELVEDIGCWCDSFPSALND------------ISDLLTGNRIFKQRNVNIGTVKLEDA 212
+ V + + + +DL +K G +D
Sbjct: 201 PTADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETGIGWKNVIA-FGVFPEDDD 259
Query: 213 WGWGFSGVMIRGSGAA--WDLRKSQPYECYSELDFDIPIGKHG--------------DCY 256
+ + G +D + + Y +S D P G H +
Sbjct: 260 YKTFLLKPGVYIDGKDEEFDSKLVKEYVGHSFFDHSAPGGLHYSVGETNPNPDKPGAYSF 319
Query: 257 DRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDPKIVPPKR--------------- 301
+ + E + R V + VG + + K+
Sbjct: 320 VKAPRYKDKPCEVGPLARMWVQN-PELSPVGQKLLKELYGIEAKKFRDLGDKAFSIMGRH 378
Query: 302 -----------ADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGN 350
+++ ++ + + Y + E EAP+G YL
Sbjct: 379 VLRAEETWLTAVAVEKWLKQVQPGAETYVKSEIPDAAEGTGFTEAPRGALLHYLKIK-DK 437
Query: 351 KPYRCKIRAPGYAHL---------QAMEFLCKGHQLAD------VSAILGSLDIVFGEV 394
K +I + + +E G + D V ++ S D G
Sbjct: 438 KIENYQIVSATLWNANPRDDMGQRGPIEEALIGVPVPDIKNPVNVGRLVRSYDPXLGCA 496