PSIBLAST alignment of GI: 254780855 and protein with PDB id: 1frf

>gi|6730012|pdb|1FRF|L Chain L, Crystal Structure Of The Ni-Fe Hydrogenase From Desulfovibrio Fructosovorans Length = 564

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/372 (12%), Positives = 90/372 (24%), Gaps = 83/372 (22%)

Query: 102 LYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGV 161
           +++    +  H        +++ A    L     + K         G   H  +   GG 
Sbjct: 178 IFTNAYFLGGHKAYYLPPEVNLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGC 237

Query: 162 ------HQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVK------- 208
                  +D     +      C         I DLL     +K      GT         
Sbjct: 238 SNYQGLTKDPLANYLALSKEVCQFVNEC--YIPDLLAVAGFYKDWGGIGGTSNYLAFGEF 295

Query: 209 --------LEDAWGWGFSGVM--------------IRGSGAAWDLRKS-----QPYECYS 241
                      A     SGV+                     +           PY+  +
Sbjct: 296 ATDDSSPEKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVT 355

Query: 242 ELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDP-KIVPPK 300
           +  +     K    + +      +  E   + R  +    G+     V      K+  P 
Sbjct: 356 DPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPA 415

Query: 301 --------------------RADMKRSMESLIH----HFKLYTEGYHVPVGEVYAAVEAP 336
                                A+M++ ++ +         L  +       +     +AP
Sbjct: 416 TALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAP 475

Query: 337 KGEFGVYLISDGGNKPYRCKIRAPGYAHL---------QAMEFLCKGHQLAD------VS 381
           +G    ++   G  K    ++  P   +L           +E    G  +AD      + 
Sbjct: 476 RGSLSHWIRIKGK-KIDNFQLVVPSTWNLGPRGPQGDKSPVEEALIGTPIADPKRPVEIL 534

Query: 382 AILGSLDIVFGE 393
             + + D     
Sbjct: 535 RTVHAFDPCIAC 546