PSIBLAST alignment of GI: 254780855 and protein with PDB id: 1yrq
>gi|66361173|pdb|1YRQ|H Chain H, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
>gi|66361175|pdb|1YRQ|I Chain I, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
>gi|66361177|pdb|1YRQ|J Chain J, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
>gi|66361179|pdb|1YRQ|K Chain K, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
>gi|66361181|pdb|1YRQ|M Chain M, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
>gi|66361183|pdb|1YRQ|N Chain N, Structure Of The Ready Oxidized Form Of [nife]-Hydrogenase Length = 549
Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/372 (12%), Positives = 90/372 (24%), Gaps = 83/372 (22%)
Query: 102 LYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGV 161
+++ + H +++ A L + K G H + GG
Sbjct: 178 IFTNAYFLGGHKAYYLPPEVNLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGC 237
Query: 162 ------HQDIPPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVK------- 208
+D + C I DLL +K GT
Sbjct: 238 SNYQGLTKDPLANYLALSKEVCQFVNEC--YIPDLLAVAGFYKDWGGIGGTSNYLAFGEF 295
Query: 209 --------LEDAWGWGFSGVM--------------IRGSGAAWDLRKS-----QPYECYS 241
A SGV+ + PY+ +
Sbjct: 296 ATDDSSPSKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVT 355
Query: 242 ELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGPVSASDP-KIVPPK 300
+ + K + + + E + R + G+ V K+ P
Sbjct: 356 DPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPA 415
Query: 301 --------------------RADMKRSMESLIH----HFKLYTEGYHVPVGEVYAAVEAP 336
A+M++ ++ + L + + +AP
Sbjct: 416 TALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAP 475
Query: 337 KGEFGVYLISDGGNKPYRCKIRAPGYAHL---------QAMEFLCKGHQLAD------VS 381
+G ++ G K ++ P +L +E G +AD +
Sbjct: 476 RGALSHWIRIKGK-KIDNFQLVVPSTWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEIL 534
Query: 382 AILGSLDIVFGE 393
+ + D
Sbjct: 535 RTVHAFDPCIAC 546