RPSBLAST alignment for GI: 254780855 and conserved domain: pfam00346

>gnl|CDD|144077 pfam00346, Complex1_49kDa, Respiratory-chain NADH dehydrogenase, 49 Kd subunit. Length = 272
 Score =  414 bits (1065), Expect = e-116
 Identities = 172/276 (62%), Positives = 211/276 (76%), Gaps = 5/276 (1%)

Query: 122 DVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSFP 181
           DVGALTP  W FEEREKLM FYE  SG+RMHAAYFR GGV QD+P   ++D+  +CD F 
Sbjct: 1   DVGALTPFFWIFEEREKLMDFYEAVSGARMHAAYFRIGGVAQDLPYGWMDDLLEFCDYFL 60

Query: 182 SALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSGAAWDLRKSQPYECYS 241
             +++  +LLT NRIFK R   +G V  EDA  WG SGVM+RGSG  WDLRKSQPYECY 
Sbjct: 61  KRVDEYEELLTQNRIFKLRLRGVGFVTAEDALNWGLSGVMLRGSGIQWDLRKSQPYECYD 120

Query: 242 ELDFDIPIGKHGDCYDRYLVRMMEMRESVKIIRQCVNRLLGKNKVGP-VSASDPKIVPPK 300
           + DFD+P+G +GDCYDRYL+R+ EMR+S++II+QC+N++ G    GP       K+ PPK
Sbjct: 121 QFDFDVPVGFNGDCYDRYLLRVEEMRQSLRIIQQCLNKMPG----GPGEKVEAFKLTPPK 176

Query: 301 RADMKRSMESLIHHFKLYTEGYHVPVGEVYAAVEAPKGEFGVYLISDGGNKPYRCKIRAP 360
           R++MK  +E+LIHHFKLY+ G+ VP GE YAAVEAPKGE GVYL+SDG   PYR KIRAP
Sbjct: 177 RSEMKDFIETLIHHFKLYSPGFKVPAGESYAAVEAPKGELGVYLVSDGSTFPYRWKIRAP 236

Query: 361 GYAHLQAMEFLCKGHQLADVSAILGSLDIVFGEVDR 396
           G+AHLQ ++ L +GH LAD+ AILGS+DIVFGEVDR
Sbjct: 237 GFAHLQILDHLSRGHLLADLVAILGSIDIVFGEVDR 272