RPSBLAST alignment of GI: 254780855 and MMDB domain: 1yq9_H_56-492
>1yq9_H (H:56-492) Periplasmic [NIFE] hydrogenase large subunit; oxidoreductase; 2.35A {Desulfovibrio gigas}Length = 437
Score = 83.8 bits (205), Expect = 4e-17
Identities = 23/286 (8%), Positives = 55/286 (19%), Gaps = 16/286 (5%)
Query: 61 AVPYFDRLDYVAPMNQEHAYALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQA 120
A + R V A AV+ +G++IP L+R L + HL++
Sbjct: 2 AQHFTQRACGVCTYVHALASVRAVDNCVGVKIPENATLMRNLTMGAQYMHDHLVHFYHLH 61
Query: 121 MDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGCWCDSF 180
+ + + + + + + + I
Sbjct: 62 ALDWVNVANALNADPAKAARLANDLSPRKTTTESLKAVQAKVKALVESGQLGIFTNAYFL 121
Query: 181 PSALNDI--------------SDLLTGNRIFKQRNVNIGTVKLEDAWGWGFSGVMIRGSG 226
+ L + + + G
Sbjct: 122 GGHPAYVLPAEVDLIATAHYLEALRVQVKAARAMAIFGAKNPHTQFTVVGGCTNYDSLRP 181
Query: 227 AAWDLRKSQPYECYSELDFDIPIGKH--GDCYDRYLVRMMEMRESVKIIRQCVNRLLGKN 284
+ E ++ Y + L
Sbjct: 182 ERIAEFRKLYKEVREFIEQVYITDLLAVAGFYKNWAGIGKTSNFLTCGEFPTDEYDLNSR 241
Query: 285 KVGPVSASDPKIVPPKRADMKRSMESLIHHFKLYTEGYHVPVGEVY 330
+ + E + + + + +H G
Sbjct: 242 YTPQGVIWGNDLSKVDDFNPDLIEEHVKYSWYEGADAHHPYKGVTK 287