RPSBLAST alignment of GI: 254780855 and protein with PDBid: 1cc1
>1cc1_L Hydrogenase (large subunit); NI-Fe-Se hydrogenase, oxidoreductase; 2.15A {Desulfovibrio baculatus} SCOP: e.18.1.1 Length = 498
Score = 197 bits (502), Expect = 3e-51
Identities = 68/456 (14%), Positives = 124/456 (27%), Gaps = 98/456 (21%)
Query: 21 HGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAY 80
G L++ +E+ V G + RG E+++ + + R+ V P A
Sbjct: 23 EGHLKIEVEVKDGKVVDAKCS-GGMFRGFEQILRGRDPRDSSQIVQRICGVCPTAHCTAS 81
Query: 81 ALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLN------------------------- 115
+A + G+++ G++ R L + SH+L+
Sbjct: 82 VMAQDDAFGVKVTTNGRITRNLIFGANYLQSHILHFYHLAALDYVKGPDVSPFVPRYANA 141
Query: 116 ----------VTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDI 165
A + L L E R G H GG +
Sbjct: 142 DLLTDRIKDGAKADATNTYGLNQYLKALEIRRICHEMVAMFGGRMPHVQGMVVGGATEIP 201
Query: 166 PPELVEDIGCWCDSFPSALNDISDLLTGNRIFKQRNVNIGTVKLEDAWGWG--------- 216
+ V + + + L ++ + ++ +G
Sbjct: 202 TADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETGIGWKNVIAFGVFPEDDDYK 261
Query: 217 ----FSGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYD--------------- 257
GV I G +D + + Y +S D P G H +
Sbjct: 262 TFLLKPGVYIDGKDEEFDSKLVKEYVGHSFFDHSAPGGLHYSVGETNPNPDKPGAYSFVK 321
Query: 258 --RYLVRMMEMRESVKIIRQC-----VNRLLGKNKVGPVSASDPKIVPPKRADMKR---- 306
RY + E+ ++ Q V + L K G + + + M R
Sbjct: 322 APRYKDKPCEVGPLARMWVQNPELSPVGQKLLKELYGIEAKKFRDLGDKAFSIMGRHVLR 381
Query: 307 ---------SMESLIHHFKLYTEGYHVPV----GEVYAAVEAPKGEFGVYLISDGGNKPY 353
++E + + E Y E EAP+G YL K
Sbjct: 382 AEETWLTAVAVEKWLKQVQPGAETYVKSEIPDAAEGTGFTEAPRGALLHYLKIKDK-KIE 440
Query: 354 RCKIRAP---------GYAHLQAMEFLCKGHQLADV 380
+I + +E G + D+
Sbjct: 441 NYQIVSATLWNANPRDDMGQRGPIEEALIGVPVPDI 476