RPSBLAST alignment of GI: 254780855 and protein with PDBid: 1yqw
>1yqw_Q Periplasmic [NIFE] hydrogenase large subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 1yrq_H 3h3x_Q 3cus_Q 3cur_H 1frf_L Length = 549
Score = 107 bits (268), Expect = 4e-24
Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 29/210 (13%)
Query: 21 HGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAY 80
G LR+++E++ V+ L RG E +++ + A + R V A
Sbjct: 25 EGHLRIMVEVENGKVKDAWSS-SQLFRGLEIILKGRDPRDAQHFTQRACGVCTYVHALAS 83
Query: 81 ALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGF------- 133
+ V+ + + IP +++R L + HL++
Sbjct: 84 SRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHLHALDWVDVTAALKADPNKAAK 143
Query: 134 ------------------EEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGC 175
++KL F E AYF G +PPE+
Sbjct: 144 LAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVNLIATA 203
Query: 176 ---WCDSFPSALNDISDLLTGNRIFKQRNV 202
+L G Q V
Sbjct: 204 HYLEALHMQVKAASAMAILGGKNPHTQFTV 233