RPSBLAST alignment of GI: 254780855 and protein with PDBid: 1yqw

>1yqw_Q Periplasmic [NIFE] hydrogenase large subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 1yrq_H 3h3x_Q 3cus_Q 3cur_H 1frf_L Length = 549
 Score =  107 bits (268), Expect = 4e-24
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 29/210 (13%)

Query: 21  HGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAY 80
            G LR+++E++   V+        L RG E +++ +    A  +  R   V       A 
Sbjct: 25  EGHLRIMVEVENGKVKDAWSS-SQLFRGLEIILKGRDPRDAQHFTQRACGVCTYVHALAS 83

Query: 81  ALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGF------- 133
           +  V+  + + IP   +++R L      +  HL++                         
Sbjct: 84  SRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHLHALDWVDVTAALKADPNKAAK 143

Query: 134 ------------------EEREKLMVFYERASGSRMHAAYFRPGGVHQDIPPELVEDIGC 175
                               ++KL  F E         AYF  G     +PPE+      
Sbjct: 144 LAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVNLIATA 203

Query: 176 ---WCDSFPSALNDISDLLTGNRIFKQRNV 202
                            +L G     Q  V
Sbjct: 204 HYLEALHMQVKAASAMAILGGKNPHTQFTV 233