RPSBLAST alignment of GI: 254780855 and protein with PDBid: 3myr
>3myr_B Nickel-dependent hydrogenase large subunit; [NIFE] hydrogenase, photosynthetic P sulfur bacterium, iron-sulfur cluster, NI-A state; HET: SF4; 2.10A {Allochromatium vinosum} Length = 561
Score = 61.0 bits (147), Expect = 5e-10
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Query: 22 GVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAYA 81
G LR+ ++DG + + G + RG E +++ + A + R+ V + A
Sbjct: 15 GHLRIEAQMDGATIAQAYSS-GTMVRGIETILKGRDPRDAWAFVQRICGVCTLVHGIASV 73
Query: 82 LAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMV 141
AVE L IE+P+ QLIR L I H+++ + R +
Sbjct: 74 RAVEDALRIELPLNAQLIRNLMIGAQYIHDHVMHFYHLHALDWVDVVSALSADPRATSEL 133
Query: 142 FYERASGSRMHAAYFR 157
++ + YF
Sbjct: 134 AQSISAWPKSSPGYFA 149