RPSBLAST alignment of GI: 254780855 and SCOP domain: d1cc1l_

Alignment

 Score =  200 bits (510), Expect = 1e-52
 Identities = 72/466 (15%), Positives = 127/466 (27%), Gaps = 98/466 (21%)

Query: 21  HGVLRLILELDGEIVERVDPHIGLLHRGTEKLIETKTFLQAVPYFDRLDYVAPMNQEHAY 80
            G L++ +E+    V       G + RG E+++  +    +     R+  V P     A 
Sbjct: 12  EGHLKIEVEVKDGKVVDAKCS-GGMFRGFEQILRGRDPRDSSQIVQRICGVCPTAHCTAS 70

Query: 81  ALAVEKLLGIEIPIRGQLIRVLYSEIGRILSHLLN------------------------- 115
            +A +   G+++   G++ R L      + SH+L+                         
Sbjct: 71  VMAQDDAFGVKVTTNGRITRNLIFGANYLQSHILHFYHLAALDYVKGPDVSPFVPRYANA 130

Query: 116 ----------VTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRPGGVHQDI 165
                         A +   L   L   E R           G   H      GG  +  
Sbjct: 131 DLLTDRIKDGAKADATNTYGLNQYLKALEIRRICHEMVAMFGGRMPHVQGMVVGGATEIP 190

Query: 166 PPELVEDIGCWCDSFPS-----------ALNDISDLLTGNRIFKQRNVNIGTVKLEDAWG 214
             + V +                      L  +   L    I  +  +  G    +D + 
Sbjct: 191 TADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETGIGWKNVIAFGVFPEDDDYK 250

Query: 215 WGF--SGVMIRGSGAAWDLRKSQPYECYSELDFDIPIGKHGDCYD--------------- 257
                 GV I G    +D +  + Y  +S  D   P G H    +               
Sbjct: 251 TFLLKPGVYIDGKDEEFDSKLVKEYVGHSFFDHSAPGGLHYSVGETNPNPDKPGAYSFVK 310

Query: 258 --RYLVRMMEMRESVKIIRQC-----VNRLLGKNKVGPVSASDPKIVPPKRADMKR---- 306
             RY  +  E+    ++  Q      V + L K   G  +     +     + M R    
Sbjct: 311 APRYKDKPCEVGPLARMWVQNPELSPVGQKLLKELYGIEAKKFRDLGDKAFSIMGRHVLR 370

Query: 307 ---------SMESLIHHFKLYTEGYHVPV----GEVYAAVEAPKGEFGVYLISDGGNKPY 353
                    ++E  +   +   E Y         E     EAP+G    YL      K  
Sbjct: 371 AEETWLTAVAVEKWLKQVQPGAETYVKSEIPDAAEGTGFTEAPRGALLHYLKIKDK-KIE 429

Query: 354 RCKIRAP---------GYAHLQAMEFLCKGHQLADVSAILGSLDIV 390
             +I +                 +E    G  + D+   +    +V
Sbjct: 430 NYQIVSATLWNANPRDDMGQRGPIEEALIGVPVPDIKNPVNVGRLV 475

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: HydB/Nqo4-like
superfamily: HydB/Nqo4-like
family: Nickel-iron hydrogenase, large subunit
domain: Nickel-iron hydrogenase, large subunit
species: Desulfomicrobium baculatum [TaxId: 899]